CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043835	Pseudomonas putida strain JYR-1 chromosome, complete genome	1 crisprs	DEDDh,cas3,csa3,DinG,WYL,PD-DExK	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043835_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043835_1

3869713-3869816

Orphan

Consensus_repeat	Method
CCTTGCCAGGAACCATAGAATCTCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043835_1

>merge|NZ_CP043835|1|3869713-3869816|CRISPRCasFinder
CCTTGCCAGGAACCATAGAATCTCCCAAAGGGATCGCATCAGGGCTGACAGGTGGTTACCACACGATATGCAGCTATCCTTGCCAGAAACCATAGAATCTCCCA

>NZ_CP043835|1|1|3869713-3869816|CRISPRCasFinder
CCTTGCCAGGAACCATAGAATCTCCCA	AAGGGATCGCATCAGGGCTGACAGGTGGTTACCACACGATATGCAGCTAT
CCTTGCCAGAAACCATAGAATCTCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043835.1\|WP_029887960.1\|3893257_3893740_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867
NZ_CP043835.1\|WP_029886506.1\|3882044_3887114_+\|RHS-repeat-associated-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP043835.1\|WP_029887523.1\|3862599_3865047_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236528
NZ_CP043835.1\|WP_029887518.1\|3868764_3869304_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP043835.1\|WP_029887520.1\|3867351_3867897_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP043835.1\|WP_029886503.1\|3891884_3892652_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_080709228.1\|3887404_3889864_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP043835.1\|WP_029886508.1\|3879317_3881144_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_104148454.1\|3862323_3862509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_029886510.1\|3873870_3876753_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_150060282.1\|3869949_3873867_-\|RHS-repeat-protein	unknown	unknown	gnl\|CDD\|368509
NZ_CP043835.1\|WP_029887524.1\|3861689_3862313_-\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198289
NZ_CP043835.1\|WP_150060283.1\|3876754_3879229_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_029887522.1\|3865125_3865536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_029887519.1\|3867962_3868688_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP043835.1\|WP_125920407.1\|3881463_3882042_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043835.1\|WP_029887525.1\|3859834_3860614_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|237896
NZ_CP043835.1\|WP_009681882.1\|3860610_3861543_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP043835.1\|WP_029886504.1\|3889908_3890988_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP043835.1\|WP_029887521.1\|3865548_3867084_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043835.1\|WP_029887960.1\|3893257_3893740_-\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	7.70641e-82
NZ_CP043835.1\|WP_029886506.1\|3882044_3887114_+\|RHS-repeat-associated-core-domain-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	5.87407e-23
NZ_CP043835.1\|WP_029887523.1\|3862599_3865047_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_CP043835.1\|WP_029887518.1\|3868764_3869304_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	4.33689e-10
NZ_CP043835.1\|WP_029887520.1\|3867351_3867897_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	1.55664e-10
NZ_CP043835.1\|WP_080709228.1\|3887404_3889864_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP043835.1\|WP_150060282.1\|3869949_3873867_-\|RHS-repeat-protein	gnl\|CDD\|368509	pfam05593, RHS_repeat, RHS Repeat. RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.	0.00438946
NZ_CP043835.1\|WP_029887524.1\|3861689_3862313_-\|glutathione-S-transferase	gnl\|CDD\|198289	cd03180, GST_C_2, C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.	3.05451e-56
NZ_CP043835.1\|WP_029887519.1\|3867962_3868688_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	2.19162e-58
NZ_CP043835.1\|WP_029887525.1\|3859834_3860614_-\|ABC-transporter-permease	gnl\|CDD\|237896	PRK15066, PRK15066, inner membrane transport permease; Provisional.	5.87993e-161
NZ_CP043835.1\|WP_009681882.1\|3860610_3861543_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.0823e-104
NZ_CP043835.1\|WP_029886504.1\|3889908_3890988_+\|fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.50106e-13

>NZ_CP043835.1|WP_029887518.1|3868764_3869304_+|type-1-fimbrial-protein
MKPLVVAFGLAISSQQALANTGSINFFGQVHSGTCAVEIIDPSTGLPASRIYMGEVSTAQFKQPDDEAANRAFGLRLTPGGGCILLPGANASVTFTGSYGGAGASGTLYALEPGGAKGLALIIKDNVGTPVDNGIASKQYPLHDSKPTDMLFSAAYKAIDTQVTAGSANSDVQFTVAMP
>NZ_CP043835.1|WP_029887519.1|3867962_3868688_+|molecular-chaperone
MKIHLRRLALGICFASMMQTAQAALTVNTTRIVFDSDNSSTSVVIANPSPRPYAVQTWVNTAKDDTDTAVPLATSPGLFRLDPGKEQMVQISRLPNKLPKDRETLFHLNVQEIPEATPGDVNVLNIALRTRLKLFYRPKELKDRPAERIGELEWSVRQRAGRVELVVHNPTPYHYTFGRLEVSSAGKTEAIQAMAMARPFDLQVYDLTQIKTLTGLQLTFTTINDYGVATTPMQKALSSLP
>NZ_CP043835.1|WP_029887520.1|3867351_3867897_+|type-1-fimbrial-protein
MKKKLIPLAILLGLASNAALANTGSINFYGQVHAGTCPIEIIDPSTGLPVARINMGNVSVSQFAATGDEAASRAFGMRVTPGNGCTVTPNTSTQVTFTGAYGGAGTGGTLYALEPGGAADLALIIKDNAGTPIDNGSPSKDYPLDDANPTTMIFSAAYKSIGTGVTAGTANTDVQFLVNIP
>NZ_CP043835.1|WP_029887521.1|3865548_3867084_-|hypothetical-protein
MTNHKEKESNKPVAKEVSDSAAAAESAILLLYALNDETQLNGLWAKRHALIGHDMDWPELVVSEREMNRTTWELSLVHLGYPKLRFETSARTLKLDKNLLTDLRLSLNTPIGMNARQAVRIEQSDASAGKVLEVTLGLNSSHIEYHKWKGSEAVVHWEQPATYVIANDRLSADRFKQHFEPLKRMKVATLSKPVSVALDDVWVYFEHDQSRIRINVFNGPGQVAAQSDPILVPASEDVAIAFEVGAFPITLTQLPPVDKDWVVGLFAPSWSMKWTLGGYIPPGNFYFAVYALSGSEMAQTKVSTQAQALKCSPLISFCDYGGDLEEIQLMSAGAQPVWGAEGTLHGELLVQNGKHYYKPPQSLPAAVRLNTGGDTFIPAACRASLVTPTETDIIKVTDTWQEAYATFVIRWVHPTHFIRVARHALGLKLSLFYLNGRQEEKAVADSQVSWRVLAGNGSVIAGVFRPDVSNPSSYSVVMGEDTFAVDEWRWGLTIIAMPMLDIDTLVDYYSR
>NZ_CP043835.1|WP_029887522.1|3865125_3865536_+|hypothetical-protein
MATPHLQYHLQLLNHLRTILVALGDAEQVPEESHALFLERFDELLTLLPQDPLQSQYLGQDLTCQVIQRYPQIAHLVPRDLLWFFGGDCLHFMPEEELDLYQQLEERRYEAERNDEPFDWHQEKQLLAQTPPSTHH
>NZ_CP043835.1|WP_029887523.1|3862599_3865047_+|acyl-CoA-dehydrogenase
MLLLWLVVLVVGAAYLTHRRLAPLQILGSVAAYVLLMSIFSSAPGWLLALIWIVLAFKVALVALPDWRRRVFTGRVFNWFQRTLPPMSQTEREAIDAGTVWWDGELFSGRPDWRTLLAYPAPKLTEEEQAFIDGPTEALCAMVSDWQIGQDLDLPPEAWAHIKSNGFFALIIPKEYGGKGFSAYAHSQVAMKLATRSGDLASTVMVPNSLGPAELLLHYGTDEQRNHYLPRLARGEEIPCFALTGPLAGSDAGAMPDTGVICKGQWQGEEVLGLRLNWEKRYITLGPVATLLGLAFKAYDPDHLLGEQEELGISLALIPTDTPGVEIGKRHLPLGAAFMNGPNSGKDVFVPLSFLIGGQAMLGKGWMMLMNCLSVGRSISLPAVGTGAAKYTSLVTGQYANIREQFNVPLAAFEGIQESLARIGGNAWLMDSARLLTAKAVDLGEKPSVLSAILKYHLTERGRECIQHAMDVHGGKGIIMGPNNYLGRNWQGAPIFITVEGANILSRNLMIFGQGAIRCHPFVLKEMALASREDRDQALKEFDDLLMKHIMFAAGNAASTLVFNLGLGRLENVPGDALSQGYFRALNRQASAFALLADLSMMLLGGALKRRERLSARLGDVLSYLYLASAALKRYHDLGSPQHMQPLLRWAMEESLGQAETALDRLLDNFPNRFIGCALRVLVFPFGRRHTGSSDELDAEVAALIGRSKGDPALEELLSGCFRPKTDGDPVAALQRACELLEEAAPLYKALHQAIKGGKVQPTPGQSAIDAAVQAGALQPGEGLQLHDAEKARRTVIDVDAFDKAQLLPEHGKVR
>NZ_CP043835.1|WP_104148454.1|3862323_3862509_-|hypothetical-protein
MWRWEFQDIFSLCRPLRGHARSHRDITGFETGETPVGAGAPAKRPVQARKLWSRLCSPPHS
>NZ_CP043835.1|WP_029887524.1|3861689_3862313_-|glutathione-S-transferase
MLKIWGRKNSSNVRKALWIAHELGLDFESIDAGGAFGVVNEPHYRARNPNGLVPLLEDGDLVLWESNAIVRYLCAEYGAERGWYLENPRQRALADKWMDWTTSSLATPFRPLFWGLLRTAEDQRDWVAINAAHKRCAELLAMADAALAKQPYLSGGQIGMGDIPLGCFAYAWFELPIERPAMRHLEAWYARLKARPAYQAAVMTALT
>NZ_CP043835.1|WP_009681882.1|3860610_3861543_-|ABC-transporter-ATP-binding-protein
MSSALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVNVFGHDLDREPAALKRCLGVVPQEFNFNQFEKTFDIVVTQAGYYGIPPKLAKERAEQYLTQLGLWDKRDVQSRSLSGGMKRRLMIARALIHEPRLLILDEPTAGVDIELRRSMWSFLTELNQKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRQLLGKLHVETFVLDLKQDLATAPVLQGYPCRLLTPHTLEVQVDKDIGITALFGQLALQNIEVQSLRNKTNRLEELFVSLVEKNLSKVAV
>NZ_CP043835.1|WP_029887525.1|3859834_3860614_-|ABC-transporter-permease
MSVELRTNWVALNTIVYREVRRFLRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMQYIVPGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHIILIGYVLGGVLRGLAVGVIVTILSMFFTDLQVHHLGVTVAVVLLTATIFSLLGFVNAVFARNFDDISIIPTFVLTPLTYLGGVFYSINLLPPFWQTVSLANPVLHMVNSFRYGILGVSDISIGTAITFMLVATAVLYLLCVRLLVSGRGMRA
>NZ_CP043835.1|WP_150060282.1|3869949_3873867_-|RHS-repeat-protein
MAHLSAHGHWGELRHNLLRMINNMAIETVVHSNAFNASGFVQNAVDPRTGQYAMSINLPALVGNYQAGPDLPIRLVFNPFSDKNTGFGQGWYIELTQYIPTTRMLRLHTGESFRVTGSGNVPGIKERKLETFRFFEESVEGKKQYRVVHKSHMEEILSEYGTRDNLVALPSEVRAASGHRILLKYDNNQRLERIIDGTDLVLLEISYGSTVNLKLHPYANDGKPVAEYKLGLVDGELRQVDLPGEAGGNWRFEYTLANGLTCLAKVSTPYGSVEDIRYGENGDTGHLLPGGGTRAAIPRVTSHAVNPGAAQPSMKTTYTYTILHEGIQAPHNFVGNGSDVTWRDDGEDNLYRARSNYRYASTAHQWGKGADGTDQVLRTTERIYNRFHLQVSEVVVQGKNQLASTTTYHGNPATEFDNQPSNFQLPLEQRSRWSVQGDASRVREEPATRTEYDLHGNLIAQTLPTGQRTVTEYYPAEDDPDGFVRNPKSVTQYPAEDGDEPAPILRRHFEFEALPRVVYPAGSAKLPASDWLVLTQESLLEVVDGVEQAPLQVTTTRPVNVATDLLRHGRPLLQTLTMGGKSTNTAFTYSTDDLDGHPVLVTEQQVTGFDNGEIDPVTGLPRNVCKVITLKDSILIGEPILNRDDNDIEIEYAYDALRRVIRETVSPNDDKYKASRTYAYGLVSGAGGQALQSRVDVKGVAVRSYIDGLGRVAREERHDADVDGGDALLRQVFRPINAFTYDELDQLTEAVEYDWKGAEQMPLATRYEYDDWGQQRCEIGPDGVKRYQEQDLIGSNPFGADPNGNLPTQTVWSESADGTMSLGKTTTWLNLFEQPALVRRFDLANKLYAKHEYFYDGLGRNVREIDARDTTTRSSYDVFGRLVDQTLADRSVVHRDYAVHSSEDLPISISVGGIMLGEQVFDGLNRMITSITGGRARHMQYEPGQTKPSKVKTAAGNVIEYQYLPQLGEEPQVRRIPGRQADYEFDPHNARLTWCKEEGEELARTYFSTGQIKQETRRIGNETWSMEYGTSLLGRQLFYKDVLGQTQTYAYYASGLLEQTALGSTSSRFFYDGLSNTQCILTLDGTQGLATELEYDHQGRECLRRFVFLNTVVEAPIEGFQFANDGVQALVDTAGLLVQGIQELEQEYSLLDQITFKRLSENGSALREESYRYDRRGRLEEYACDGLLSHSPKDPAGKTIRQQYFNFDALDNITWVLTDFEEEDGSKDSNEATYLFENDDPAQLTGVTNTHADYADFTLEYDEDGNMKVDDRGKVLTYDALGRLNSYDGGGYSYDPLDRLSGQEA
>NZ_CP043835.1|WP_029886510.1|3873870_3876753_-|hypothetical-protein
MERRLASPEEQKTSVRQDWGGVLALDRSLLDLVLREQYLEALGNFGAMDPIHLEAYLDEGQRIGVTLQGLVLGVPQVSFEHATGVGSGLTLRMNIIAGEYMRVLGLPGRPKRVVESFTLTEAMGYRVEAPLEVRVGRPKGSRHTQLQLNLASADSYSTNLGPTPYAQAMLGRRLQQSISYMRAYQHTYSLGSFVMDDYYPLSPEQFMVNTMAAPWGQSEGSPRYGDGAVLVFMKLGIDLRPGGQLPPGTDFPYPIAEGASDLPGTLILVPDIAELGAGEVKDVLSTFSLPSGHEFVMRASSSDADLVLTGNWQKKAGALAVEPAFANVVTGQPIAFTADGATGQVLWSATNLMRPKAVGTFNGASYSPTPADRFVQDQQMVLVTATSPDGPDPVLSHALVVESARTVHVAPRVATWVTGDAPIELRASSADGGSLQWSLVEAVLLSNGTNRVQPLDQPLGELDDKGNGRAIFTPYPPSSGRDFEVQRIRCTNRLTGDSAEGAVVVIGWEADLNVVPFHVAQGLSMQPTPFTIMSREFEQNLGRAVTWTVHGEGEFHDSVYIPPQSPQWPIAVVTGFDGIERTGYAIVEFSQSRQDKIAGLLSWETIANFELRAIGAPQCYANGWQQVEVEVTVAAADDSNGNPVEISDADLATLKFLNVDSNNDLPFLAPLEEALAAGDDDAPDWAVNRVANDIQRQPGLQVGGSAPLRARNRRFFLHSRKPGVIGVIASIQNTLTGKVVTSENLGEKGKLELRGQDIPSFTQELYSFKRTRVAGDTSPSEGDEFAYIDTSTDNWLLEHVIKEGRITKFARLFIKDTDRKSAVRWSWQPGSSTPPVQDDDFVSFTGFSFESSNGQIKDELLFDGLLYRMAKNRAYALPDRVLGAKPGAGQLMITLQRDSGFVLSCGLEDPGYRKALERDLEFTLLDVEGNTHPLKFTFAVTAEEERAGITHRDVLKLSIR
>NZ_CP043835.1|WP_150060283.1|3876754_3879229_-|hypothetical-protein
MNSKAPVRAQAVGIQSLEEFLRKMEQGAQTVKWDALLVFDRAATNALLTQEYIDRIDIEEAFFPKLKDDVVDSGNGIKHVLNGLVLDKPRLSFENATIASSKGKLQMRLVGGKHLEVIDTPHAGQMVRSVTALVIYNAATRGILDMDIDLRAVQGSVNDSGKVLLDLKDGTEHVFSGGATGPERIRLGVYFKGQLDSWSKEITQFPLSEMVVDANSPINPGFFGIRTHAAPGGALLGSENFGEGAVVVFVAMQGSKPGDYPHDDSALLYMLPAAVEPYTSNLVLSQKFMANQAIKRGLDQFEWISGKFDVRELPGERYELVANGQTTHWISYEYYDEGHGGTLQPWRWKLSVNGVHVPLFSPGDKFVFEGRSLKAHWRTEVVAGTVVYFIQTGDSAGRTINLDINAIVSIDASYKFVVDDAEVKPVLKFVMDDIKVNTKIDIQDDFGSGDAASAARNNSANIVVGLETKLKSEFEAKASELMDMTFEIDALRLNNLLFRGENVVEPRDVSLPTDLTLLGKLAPKRTTMVISPSEPIVARGGVIEFSVSPAAASVNWTVSNLPGETGDTGSFKDPSVGRYTAPSDDALLREGQRRLIVTATSGELVSKALVSVVPNHITVSPLVAVVGVGRSFAVSAGTPDGAAVTWDTPELGTVAPDDDPLNPGGYKYTAPLELPIGDGTKPEHYGELRLDEVTVRSVGGHSAKIDMLVVGSKSSNYWMEPEVRDDGKVALPFYKLDKHKQKVKVPEPIEWTVLRGGGSVDQDTQVYTPGNDGNDQYAIISAFHVNDDWFDTHDYVILPLPFVPGPAYTNILNGVKTSHGLEEV
>NZ_CP043835.1|WP_029886508.1|3879317_3881144_-|hypothetical-protein
MVMRRPFEGGVDQPQLNPAPEIPAQNAWGEIDVKNLNGNDLEFLIKDADIRFGQSIYPVWRGIAADGTPFDKLDAVVEVPADYDTTRTMTAKVGYRFVQPYDGGWAFLSYKVQNADEATPDSMRVFCYLGLRDRGGVAETLAVAQARESHDRVIVLSDLESEGVRLLAPSYRAMQVGDSIELVARKFNAAGDEITPPATERHEVTEANVGEPLQWQIAKSDFSRVRNGRVAFQYTITLSANDEKVPSPVQEMTVTEAPSPADLLPAATIDGFTGVPLDPGMFPDGLIVRVPTAPSVQVGDHYLLHWKSPQALEPEVQFARMDASSLQSDETVFRVDPALLEPGDHKVFYQVARAGHALTSHSLDVAFETARTLAAPRIERAEEDGLGRQKLLADSAILGAYVTVPDVPLRPGERFEVHWDGYEHNGKQVVDTPEVGDGRKFKIDPGVVAANMHQPGDDHSRRFKVFYHIVDENGVRSAPSDAVDLRVQPLVIDNNVKCDQAQANGELWRSKLSANGAMLEVYGVLLWPFAATGQLFTLAIQSGAVLRDRAPVTAGELSNARIQQWLSVATYNGLEEDKQYTVYGEVSFDQGDSWHKLRPLLLIPKHSK
>NZ_CP043835.1|WP_125920407.1|3881463_3882042_+|hypothetical-protein
MNQLNDRRPTLPSALIQAMLTMPLLLSSVAADAADTTRSNLADPTPLLSLYQTVDNNTEPACGFELPEAGSGTTVKLLPKKKCPSEAREPHSIRIRNVPIKSTFLLTDNERCEKLDSSWVELDTSRANASLEKMGIDKIWTYAGRPEKPGYLTNSGLDNNVPSRGFRVIGKGDPIKQGDLTCIVVTIAPRSI
>NZ_CP043835.1|WP_029886506.1|3882044_3887114_+|RHS-repeat-associated-core-domain-containing-protein
MADTPGVHSNASNFQSFVQNNVDQRTGQYNLAIDLPVPAGNDLTGPGLPLRLSYSPFSNEDSGFGTGWRLAMTRYEPATRMLTLHTGESYKVTGTGAQPTIREKKIHSFHFYDDGTAADEDKGPYRVVHKSGLVEILTLHDKLNPIALPSKVRAPSGQGLTLHYIPESRRLARIVDDNGTLLLELQYTDGAVTVDTHPGAGANGLPFLRYRLELKNRALVQVKLPADIGGNWRFGYTRAHGLTCLAKVSTPMGAVEEIRYGENGDPGHVLPNTQPQRVLPRVTSHEVKPRADQPPLITTYTYKHFDEDNNVEVEHSYVGSNSNVSWRDDGEDNLYRASANYRYSVTAHYWKAGKVARTQTQTFNRYHLLTRQILEEDGHIEETETEFHERAGVSFDDQPRYFQLPKTITKRYKLRADASKLRLETATTLYDDYGNTTEEVAPTGVRTTYAYYDKDGEKQPGDENGDNWACPPDPQGFVRNLKCKTVYPVPGLPGGAPIFRSRLTYKAYPALSSLGQASEWLAPCAEQTLQVFDVQQPDEREVLLLNVERAYLNMPDNAFLHGRPSYQVTTRYGDDSANPVRRAIESRTSRVEWSYCKVTDKEHGLEYWTDETVCGFDLVQKKTRSAASGLHGQTVYEEDDTGNSIRRIYDPLARLKEEIVAPGQGEDESKVIHQYGLVTHPEEGAAGPASQSSTGSTGVSTIVTFDGCSRVVTEERETQVTDTPPGARPLRQRKIVARRKYDELGQLSEETTFDYYDGKTLELTSTFEYDAWSQLCKTTLPNGATQHSEFSPFGESGDIITRWVETADKPGVRQQQQVTESNNFDKPAYQYRLDEAGQIVGRQDFSYDGLARCTREEHTFNRSGRPVSRVNQYTYDSEGRVTRNERPDQSAVLSRFALHSADPLAEQLLVERRKGAQPTLAWQREYDGLERLKTLAAGLQQEAYTYKENTSLLESRTTAQRTYTYHYRPTRSAQPSQIDVGTVPSTTFDYDSKTSAISTASDAQGKHSYSYTDQGYLLKAQWEDQDAKGYHCDYRHSFQGLPLGYTESDGVAVNHAYNDLGQLIQTRQGDLVASFEYDTLGRLWKTTTQDLINKQRLVCEQTYDLLGREHKREQTLTRQDGSTLTQHIVLTWQEDDQLSSRALIRDGEQLLLETFNYDALDRLEEHRCTGTALPNNAAGRAIKSQFFVYDELNNLTECYTDFADGAADEAFYTYDGFMLTRAEHSLQPDYPASQAFDSDAEGNLLNDEQGNRLVYDDRGRLSEVQRASDGQPLYRYRYDSHNDLIGVRQAHEPEVSRRYQGYRLSSTREANLLTEYLYAGERPLGLQRPAQTADNRLFVTDAANSVLGECSSDELHDNTYTAYGDSPDNDQLVGLLGFNGEARERALGWSLLGRGYRAYNPGLMRFHSPDLAAPEAAGINPYVYCGGNPVNWHDPSGHYGMRNSMEQPYIPPKPVKPIADWRSWLGLAMSAAFAVVSFLLLPPVGMTMHFALGAGSLFIDGFTVLKRFKDTVTGSEPDESMFLYDTASGGTTFFLILYQLWQSKGAKTPIITKRAASWGRRRMDGFGGDFFVKQRLPGLGGRNAMARSKYISTNQKMYLPVSEAPSAYDLNRQSVTFSDKVTVLEPQPIPVTATIEPSPIKAVDLVDEKTVVITTPSSPTKKWPAVITTPPGNYNRHGWQTPAERKWKV
>NZ_CP043835.1|WP_080709228.1|3887404_3889864_+|fimbrial-biogenesis-outer-membrane-usher-protein
MLSVVGYVLLHVSSTSIRAEEHPLQFNPNFMRQTPGQSSDASIAALNTLAAQASLAPGRYQVEVLVNLAPAGKHEIEFREGSDGKGLEPCLSASLLRELGLREQALAEPLPTDARCVDLPTLVPDATYDLNPGQLQLALSIPQVALRRDVAGSVAPERWDDGINAAFVSYQASAQHFSGRTGTSSSQDLYLNGGINLGGWRLRSSQSWRDDGEGQDWVHFNTYAQHDLPAQWGTLTLGETFSSGDVFRSLPIKGVQLATDMGMLPDVMQSYAPVIRGVAQTRAKLEVLQNGYPIYSTYVAPGPYEINDLGIGGSSGDLEIVLTEADGQVRRFIQPYSTLSNLLREGVWRYNLVAGRYDGADGIDNPALWQATLARGGQWGTTLYGGLLGSEYYDAANLGIARDFGTFGAVSLDVTQARTDLGEQGGQVQGQSYSVRYGKAFQTGTSLRFAGYRYSTEGYREFDEAVQQRNASSRYQGNRRSRLESSIYQSFNNRNSLSLTLSQDDYWHTNRQRRQYQFQFNTQYRRVSINLYASQSLSDDNGSDRIVGVGVTIPLDWGTSTTASFDVQESNGHFSERASLNGGSQDNRLSYLASLANDEQQRKTASVSMGYQTQKVNVGAGYTEADDFRSVSVNASGAVLAHAGGIVLGQYLGETTALVHVPDVPGVGVDNVPGGSTDSSGYILAPHMRPYRVNQVTLQTDQLGPGVEIENGVTQVVPRRGAVALAAFKAQQVNRLILTLQHADGRPLPFGTQLNDKQGKHLAVVGQAGQALIATDAQAQTLEARWGERAGQRCLFSIDPATMPEEQGYRLQTLRCPTP
>NZ_CP043835.1|WP_029886504.1|3889908_3890988_+|fimbrial-protein
MPLVSRLFIGIAAAATMLTLPSQAHALGCEWPTTTGPMQFTHNISGMRWVARDAPVGSKIYSATSIGIAGPGFALNCDNDGSLALTANMGTPLPVAPGTFPPVDGKDVTGKVLQTSIPGVGLYLELGGFLNGTASNTFQANDGGIGAVPYVGENQRNMAPTPLVMRNLIIKYMALIKTGPIPAGISSFSQEVVRGVVSDVGDAVRLALGGQVQQAQCTVKADAVSANPVQLGTHDIADFTGQGSTTNPVDFFITLSDCEDDPAGSVARAFMRLDGVDGSVPVDRDLGLFTLTTDSTAAGIGIQVLRSDNTPVKLEEYVDMVGLTPGVTRLDLRARYYQTAATVTPGEAKGALNFTIEYR
>NZ_CP043835.1|WP_029886503.1|3891884_3892652_+|hypothetical-protein
MTPLLITLLIVAGIALLIVIGYLNNVVENGKLERARLKIELADRLRRCGEITETFPGQFMTPALKLLLTRLELNLNQRQLAVDKHNAQLKARMAELEGLIALGEKIPVNNPPNPIQTEVKAKDVRFLLEALHNQVTRAAQEGFLPAPEAKHWVKEIRHILVLLHIEFFNNLGQQALQKGQPGQARLAFERGVQYLRKQPEPKVYEEQLTYLEKLLGRANAQVLDQMEPAEDEHNELTQGLKTDEDETWKKKVMYD
>NZ_CP043835.1|WP_029887960.1|3893257_3893740_-|GAF-domain-containing-protein
MIDLSASGVGLDGYHLLAAQVQALFADERDFIANAAQFSAFLYHQVGDLNWAGFYLNRNGQLVLGPFQGQVACVRIPFGKGVCGAAAATGKTQRVEDVHAFPGHIACDSASNSELVIPLVKEGRLIGVLDLDSPRLARFSEADQVGLERLAAIFLELTDC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

317378 : 411307

100

Pseudomonas_virus(35.71%)

portal,holin,head,protease,terminase,tail,plate,capsid,integrase

attL 316076:316134|attR 394819:394877

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
316076:316134	attL	NA	NA	NA	NA
WP_009681235.1\|317378_317861_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_029887607.1\|317970_318372_+	RNA-binding protein S4	NA	NA	NA	NA
WP_009681237.1\|318455_319250_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_029887606.1\|319359_320259_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_009681239.1\|320438_321980_+	phosphoenolpyruvate carboxykinase	A0A2H4PQN1	Staphylococcus_phage	1.6e-124	46.7
WP_029885612.1\|322244_322685_+	thioesterase	NA	NA	NA	NA
WP_125920221.1\|322739_323162_-	hypothetical protein	NA	NA	NA	NA
WP_029885611.1\|323452_325798_-	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_029885610.1\|325803_326634_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_009683781.1\|326812_327253_+	peptidoglycan-binding protein LysM	G3MBQ1	Bacillus_virus	4.3e-06	51.9
WP_029885609.1\|327382_328045_-	GMP/IMP nucleotidase	NA	NA	NA	NA
WP_029885608.1\|328109_328676_+	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_029885607.1\|328672_329491_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_029885606.1\|329639_330095_-	thioesterase	NA	NA	NA	NA
WP_029885605.1\|330094_331501_-	sigma-54-dependent Fis family transcriptional regulator	W8CYM9	Bacillus_phage	3.0e-08	28.7
WP_009684783.1\|331497_333312_-	sensor histidine kinase	NA	NA	NA	NA
WP_029885604.1\|333354_333900_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.5e-50	54.5
WP_009684781.1\|334177_335284_+	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	4.3e-103	50.1
WP_080709188.1\|335468_335666_+	hypothetical protein	NA	NA	NA	NA
WP_029885603.1\|336086_337406_+	OprD family porin	NA	NA	NA	NA
WP_033744427.1\|337591_338968_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_029885601.1\|338960_339683_-	response regulator transcription factor	W8CYM9	Bacillus_phage	6.4e-31	34.6
WP_029885600.1\|339822_342120_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_029885598.1\|343430_343658_+	hypothetical protein	NA	NA	NA	NA
WP_029885597.1\|343654_343978_-	XRE family transcriptional regulator	A0A2D1GR59	Pseudomonas_phage	2.1e-05	45.6
WP_150060218.1\|344713_345751_+	hypothetical protein	NA	NA	NA	NA
WP_125920189.1\|345858_347034_-\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	1.2e-74	40.5
WP_029885336.1\|347030_347243_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_125920190.1\|347344_347983_-	hypothetical protein	NA	NA	NA	NA
WP_125920191.1\|347995_348232_-	hypothetical protein	NA	NA	NA	NA
WP_150060219.1\|348398_348599_-	hypothetical protein	NA	NA	NA	NA
WP_029885333.1\|348662_348956_-	hypothetical protein	NA	NA	NA	NA
WP_125920193.1\|348969_351783_-	toprim domain-containing protein	A0A2H4J936	uncultured_Caudovirales_phage	0.0e+00	63.2
WP_125920194.1\|351779_352022_-	hypothetical protein	A0A2H4JGL7	uncultured_Caudovirales_phage	6.9e-14	55.4
WP_125920195.1\|352100_352469_-	hypothetical protein	A0A2H4J947	uncultured_Caudovirales_phage	4.3e-07	33.3
WP_125920196.1\|352465_352768_-	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	1.2e-12	43.0
WP_125920197.1\|352764_353250_-	hypothetical protein	A0A2H4JG61	uncultured_Caudovirales_phage	1.7e-43	55.8
WP_125920222.1\|353280_353481_-	DNA-binding protein	NA	NA	NA	NA
WP_125920198.1\|353566_353890_+	helix-turn-helix transcriptional regulator	Q6QID2	Burkholderia_phage	1.0e-17	49.1
WP_125920199.1\|353970_354441_+	hypothetical protein	NA	NA	NA	NA
WP_125920223.1\|354725_355949_-	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	4.2e-160	71.4
WP_125920200.1\|355987_356428_-\|tail	phage tail protein	A0A2H4JG54	uncultured_Caudovirales_phage	7.0e-57	71.2
WP_125920201.1\|356434_360244_-\|tail	phage tail tape measure protein	F1BUT7	Erwinia_phage	5.5e-89	64.9
WP_125920202.1\|360233_360353_-\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	4.2e-09	71.8
WP_063424009.1\|360361_360700_-\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	5.3e-20	56.8
WP_125920203.1\|360720_361236_-\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	2.1e-68	72.5
WP_125920204.1\|361250_362423_-\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	2.0e-167	74.6
WP_125920205.1\|362524_362989_-	hypothetical protein	A4PE47	Ralstonia_virus	6.3e-16	46.6
WP_125920206.1\|363011_363752_-	hypothetical protein	NA	NA	NA	NA
WP_125920207.1\|363758_364637_-\|tail	phage tail protein	A2I2X8	Vibrio_virus	1.5e-18	37.6
WP_125920208.1\|364633_365446_-\|tail	phage tail protein I	Q858V5	Yersinia_virus	1.4e-13	34.7
WP_125920224.1\|365442_366441_-\|tail	phage tail protein	E5G6N8	Salmonella_phage	1.5e-62	45.0
WP_125920209.1\|366452_366797_-\|plate	baseplate assembly protein	Q9ZXK9	Pseudomonas_virus	1.7e-29	56.6
WP_150060220.1\|366793_367369_-\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	4.9e-66	64.0
WP_125920210.1\|367429_367885_-	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	8.1e-40	57.1
WP_125920211.1\|367877_368411_-\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	2.0e-53	59.8
WP_125920212.1\|368485_368938_-	LysB family transcriptional regulator	Q9ZXL5	Pseudomonas_virus	2.1e-19	44.2
WP_125920213.1\|368937_369771_-	DUF3380 domain-containing protein	Q9ZXL6	Pseudomonas_virus	1.5e-87	60.6
WP_016484478.1\|369767_370085_-\|holin	phage holin, lambda family	A0A2H4JFM8	uncultured_Caudovirales_phage	3.7e-23	52.4
WP_016484479.1\|370118_370331_-\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	7.8e-22	77.4
WP_125920214.1\|370330_370807_-\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	7.1e-47	62.0
WP_125920215.1\|370904_371606_-\|terminase	terminase	Q9ZXM2	Pseudomonas_virus	1.7e-68	60.5
WP_063423991.1\|371608_372619_-\|capsid	phage major capsid protein, P2 family	A0A2H4JCR7	uncultured_Caudovirales_phage	2.9e-122	67.7
WP_125920216.1\|372658_373507_-\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	1.1e-87	63.4
WP_125920217.1\|373659_375411_+\|terminase	terminase ATPase subunit family protein	A0A2H4JGK4	uncultured_Caudovirales_phage	4.2e-270	79.7
WP_125920218.1\|375410_376454_+\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	8.1e-152	76.4
WP_125920225.1\|376532_377453_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_125920219.1\|377470_377782_-	hypothetical protein	NA	NA	NA	NA
WP_125920220.1\|377791_378028_-	hypothetical protein	NA	NA	NA	NA
WP_029885297.1\|379075_379654_-	hypothetical protein	NA	NA	NA	NA
WP_009682865.1\|379916_380165_-	hypothetical protein	NA	NA	NA	NA
WP_029885296.1\|380664_380940_+	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_064314553.1\|381170_382376_-	methyltransferase	NA	NA	NA	NA
WP_009682869.1\|382504_383194_-	ABC transporter permease	NA	NA	NA	NA
WP_029887659.1\|383193_383886_-	ABC transporter permease	NA	NA	NA	NA
WP_029887658.1\|383939_384692_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009682872.1\|384703_385477_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.4e-21	32.9
WP_029887657.1\|386118_387504_+	GABA permease	NA	NA	NA	NA
WP_009682874.1\|387685_388126_-	hypothetical protein	NA	NA	NA	NA
WP_029887656.1\|388591_388894_+	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	7.8e-15	50.0
WP_009682876.1\|389195_389468_-	oxidative damage protection protein	NA	NA	NA	NA
WP_029887655.1\|389467_390532_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_029887654.1\|390528_392781_-	AsmA family protein	NA	NA	NA	NA
WP_047150101.1\|393033_394695_+	OFA family MFS transporter	NA	NA	NA	NA
WP_009682881.1\|395310_395904_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
394819:394877	attR	NA	NA	NA	NA
WP_009682882.1\|395904_396543_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_009682883.1\|396543_396804_+	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_009682884.1\|396918_397650_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_029886410.1\|397759_398530_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_009682886.1\|398633_399812_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-24	36.2
WP_029886409.1\|399808_400654_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_029886408.1\|400738_401686_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_029886407.1\|402137_403514_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_009682890.1\|403961_405068_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009682891.1\|405172_405430_-	hypothetical protein	NA	NA	NA	NA
WP_029886406.1\|405785_407756_+	hypothetical protein	NA	NA	NA	NA
WP_029886405.1\|407847_408315_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
WP_029886404.1\|408325_409291_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_029886403.1\|409354_410239_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_029886402.1\|410362_411307_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_2

1091153 : 1098916

Thermobifida_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009683042.1\|1091153_1092008_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	2.4e-08	31.9
WP_009683041.1\|1092010_1092475_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_003255135.1\|1092487_1092796_-	ribosome-associated translation inhibitor RaiA	A0A0K1LP60	Escherichia_phage	4.4e-05	34.1
WP_047149962.1\|1092875_1094369_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_047149963.1\|1094542_1095268_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-22	26.5
WP_029887549.1\|1095268_1095793_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_009683035.1\|1095779_1096352_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_009683034.1\|1096360_1096885_-	HAD family hydrolase	A0A140XBD6	Dickeya_phage	5.3e-27	48.1
WP_009683033.1\|1096884_1097859_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.7e-34	31.5
WP_009683032.1\|1098106_1098916_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.7e-24	32.1

DBSCAN-SWA_3

1548667 : 1589198

Pseudomonas_phage(58.97%)

portal,holin,head,protease,terminase,tail,capsid,integrase

attL 1548495:1548554|attR 1589941:1590005

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1548495:1548554	attL	NA	NA	NA	NA
WP_150060241.1\|1548667_1549645_+\|integrase	tyrosine-type recombinase/integrase	W6MYA3	Pseudomonas_phage	6.0e-125	69.2
WP_029887632.1\|1549783_1551058_+	ATP-binding protein	NA	NA	NA	NA
WP_029887633.1\|1551047_1551692_+	hypothetical protein	NA	NA	NA	NA
WP_029887634.1\|1551692_1551941_-	hypothetical protein	B5WZU8	Pseudomonas_phage	2.2e-15	56.6
WP_029887635.1\|1551937_1552345_-	hypothetical protein	NA	NA	NA	NA
WP_029887637.1\|1552907_1553111_-	hypothetical protein	NA	NA	NA	NA
WP_016489238.1\|1553107_1553545_-	tellurite resistance TerB family protein	Q1MVI3	Enterobacteria_phage	4.2e-46	65.7
WP_029887638.1\|1553652_1554048_-	response regulator transcription factor	A0A1W6JTA9	Pseudomonas_phage	2.2e-25	58.7
WP_029887639.1\|1554185_1554914_-	LexA family transcriptional regulator	K7P8B2	Enterobacteria_phage	3.6e-50	44.4
WP_080709272.1\|1555020_1555314_+	hypothetical protein	NA	NA	NA	NA
WP_150060242.1\|1555451_1555862_+	hypothetical protein	NA	NA	NA	NA
WP_050492249.1\|1555855_1556152_+	hypothetical protein	NA	NA	NA	NA
WP_029887643.1\|1556148_1556877_+	hypothetical protein	A0A1W6JTB2	Pseudomonas_phage	5.8e-56	49.6
WP_050492250.1\|1556873_1557398_+	hypothetical protein	A0A2H4J5Q4	uncultured_Caudovirales_phage	9.1e-11	40.0
WP_029887644.1\|1557402_1558137_+	helix-turn-helix domain-containing protein	A0A0P0ZC04	Stx2-converting_phage	2.4e-41	51.1
WP_029887645.1\|1558117_1558918_+	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	3.1e-63	49.2
WP_029887646.1\|1558914_1560279_+	AAA family ATPase	A0A2H4J8N1	uncultured_Caudovirales_phage	6.0e-139	58.0
WP_029887647.1\|1560275_1560620_+	hypothetical protein	A0A0H5ARQ3	Pseudomonas_phage	5.5e-33	59.1
WP_029887648.1\|1560616_1561951_+\|integrase	site-specific integrase	A0A2D1GND4	Pseudomonas_phage	3.0e-111	48.6
WP_029887649.1\|1561943_1562231_+	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	5.8e-12	43.7
WP_029887650.1\|1562227_1562617_+	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	4.2e-37	59.4
WP_016489223.1\|1562842_1563352_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	7.5e-87	95.9
WP_019438288.1\|1563607_1563940_+\|holin	phage holin, lambda family	A0A2H4J1U5	uncultured_Caudovirales_phage	1.6e-53	90.9
WP_019438289.1\|1564006_1564237_-	hypothetical protein	NA	NA	NA	NA
WP_009685289.1\|1564340_1564565_+	hypothetical protein	NA	NA	NA	NA
WP_029885665.1\|1564629_1564809_+	hypothetical protein	NA	NA	NA	NA
WP_029885666.1\|1564799_1565165_+	HNH endonuclease	H2BDK0	Pseudomonas_virus	1.8e-18	60.5
WP_029885667.1\|1565172_1565673_+	hypothetical protein	V9SI64	Achromobacter_phage	1.6e-12	33.1
WP_029885668.1\|1565812_1566196_+\|terminase	terminase	Q9XJT7	Pseudomonas_phage	2.3e-19	44.2
WP_150060243.1\|1566195_1567905_+\|terminase	terminase large subunit	A0A0R6PIM0	Moraxella_phage	6.8e-233	68.2
WP_080709194.1\|1568073_1569408_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	1.1e-129	55.1
WP_029885671.1\|1569404_1570106_+\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	2.5e-72	61.5
WP_050492188.1\|1570115_1571372_+\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	4.7e-90	48.5
WP_029885673.1\|1571413_1571638_+	hypothetical protein	NA	NA	NA	NA
WP_029885674.1\|1571641_1572118_+\|head,tail	phage gp6-like head-tail connector protein	G3ENA1	Psychrobacter_phage	1.7e-16	38.6
WP_029885675.1\|1572117_1572459_+\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	3.4e-19	49.1
WP_029885676.1\|1572451_1572937_+	HK97 gp10 family phage protein	Q9MCA7	Pseudomonas_phage	5.0e-56	74.8
WP_029885677.1\|1572933_1573302_+	DUF3168 domain-containing protein	Q9MCA6	Pseudomonas_phage	1.9e-39	63.9
WP_029885678.1\|1573364_1573865_+\|tail	phage major tail protein	A0A0U4ISC1	Pseudomonas_phage	5.0e-51	59.1
WP_029885679.1\|1573861_1574200_+	hypothetical protein	NA	NA	NA	NA
WP_080709195.1\|1574226_1574487_+	hypothetical protein	Q9MCA3	Pseudomonas_phage	1.1e-12	47.7
WP_029885680.1\|1574561_1574912_+	superinfection immunity protein	M4MA40	Vibrio_phage	1.1e-07	53.1
WP_029885681.1\|1574965_1577524_+\|tail	phage tail tape measure protein	A0A2H4PI09	Pseudomonas_phage	1.5e-207	56.5
WP_029885682.1\|1577523_1577871_+\|tail	phage tail protein	A0A2D1GNJ1	Pseudomonas_phage	4.9e-29	52.6
WP_029885683.1\|1577905_1578607_+\|tail	phage minor tail protein L	A0A2D1GNF3	Pseudomonas_phage	4.6e-103	76.5
WP_029885684.1\|1578610_1579393_+	C40 family peptidase	A0A2D1GNP8	Pseudomonas_phage	4.5e-123	75.4
WP_029885685.1\|1579389_1579974_+\|tail	tail assembly protein	A0A2D1GNM2	Pseudomonas_phage	3.3e-70	71.6
WP_150060244.1\|1580028_1587249_+	DUF1983 domain-containing protein	A0A2D1GNE3	Pseudomonas_phage	1.2e-12	27.8
WP_029887515.1\|1587245_1587626_+	hypothetical protein	NA	NA	NA	NA
WP_029887516.1\|1587841_1588066_+	hypothetical protein	NA	NA	NA	NA
WP_150060245.1\|1588126_1588558_+	glycoside hydrolase family protein	B5WZU3	Pseudomonas_phage	9.9e-56	78.7
WP_029888052.1\|1588554_1588917_+	hypothetical protein	J7HXL1	Pseudomonas_phage	1.5e-17	45.7
WP_029888053.1\|1588913_1589198_+	hypothetical protein	H2BDA1	Pseudomonas_phage	1.4e-21	66.3
1589941:1590005	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2095634 : 2104397

uncultured_Caudovirales_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009683105.1\|2095634_2096915_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.7e-96	54.4
WP_029887833.1\|2096915_2098307_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_029887834.1\|2098421_2099381_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_029887835.1\|2099474_2100476_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.8e-156	80.5
WP_029887836.1\|2100487_2100823_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.1e-41	74.8
WP_029887837.1\|2100819_2101116_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.4e-24	60.6
WP_029887838.1\|2101115_2101475_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	9.5e-36	64.2
WP_029887839.1\|2101476_2101869_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.9e-53	79.8
WP_029887840.1\|2102095_2103475_-	uracil-xanthine permease	H9YQ34	environmental_Halophage	1.3e-27	50.4
WP_125920187.1\|2103444_2103783_+	hypothetical protein	NA	NA	NA	NA
WP_003251184.1\|2103725_2104397_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.1e-105	91.0

DBSCAN-SWA_5

2352467 : 2360644

uncultured_Caudovirales_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029885759.1\|2352467_2352938_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	9.2e-55	67.3
WP_029885760.1\|2352966_2354250_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.3e-172	74.6
WP_029885761.1\|2354271_2354619_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	2.9e-37	65.5
WP_029885762.1\|2354774_2355908_+	alanine--glyoxylate aminotransferase family protein	A0A0N9QIZ2	Chrysochromulina_ericina_virus	5.2e-80	40.5
WP_029885764.1\|2356622_2358248_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.0e-53	40.8
WP_029885766.1\|2358571_2360644_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.7e-31	26.1

DBSCAN-SWA_6

3243019 : 3304037

Staphylococcus_phage(16.67%)

integrase,coat,tRNA

attL 3269693:3269707|attR 3310321:3310335

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009685880.1\|3243019_3244036_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_003250671.1\|3244145_3244502_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_003250667.1\|3244529_3244724_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_003250662.1\|3244784_3245318_-	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	3.4e-13	38.4
WP_009685881.1\|3245335_3247258_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.7e-123	36.7
WP_009685883.1\|3247592_3247898_+	hypothetical protein	NA	NA	NA	NA
WP_003250656.1\|3248060_3248273_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.9e-16	61.2
WP_009685884.1\|3248349_3248679_-	hypothetical protein	NA	NA	NA	NA
WP_009685885.1\|3248954_3249167_+	hypothetical protein	NA	NA	NA	NA
WP_029884926.1\|3249138_3250140_-	nucleoside hydrolase	NA	NA	NA	NA
WP_009685887.1\|3250212_3250611_-	D-ribose pyranase	NA	NA	NA	NA
WP_029884925.1\|3250607_3251516_-	ribokinase	NA	NA	NA	NA
WP_029884924.1\|3251531_3252554_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.4e-38	30.9
WP_029884923.1\|3252558_3253551_-	ABC transporter permease	NA	NA	NA	NA
WP_029884922.1\|3253547_3255101_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.7e-09	27.7
WP_029884921.1\|3255127_3256081_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009685895.1\|3256479_3257568_+	asparaginase	NA	NA	NA	NA
WP_029884920.1\|3257620_3258112_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_029884919.1\|3258229_3259150_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_029884918.1\|3259310_3260099_+	YqcI/YcgG family protein	NA	NA	NA	NA
WP_009685899.1\|3260101_3260728_+	LysE family translocator	NA	NA	NA	NA
WP_029884917.1\|3260767_3261847_+	hypothetical protein	NA	NA	NA	NA
WP_029884916.1\|3261986_3262682_+	hypothetical protein	NA	NA	NA	NA
WP_029884915.1\|3262803_3263496_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_009685903.1\|3263492_3263807_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_150060257.1\|3263803_3264637_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_029884913.1\|3264709_3264937_+	hypothetical protein	NA	NA	NA	NA
WP_029884912.1\|3264969_3265452_-	copper chaperone PCu(A)C	NA	NA	NA	NA
WP_009685906.1\|3265452_3266061_-	SCO family protein	NA	NA	NA	NA
WP_003250416.1\|3266362_3266947_-	Fe-S biogenesis protein NfuA	NA	NA	NA	NA
WP_064314467.1\|3267005_3268040_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	9.8e-17	32.6
WP_029886970.1\|3268153_3270454_-	fatty acid cis/trans isomerase	NA	NA	NA	NA
3269693:3269707	attL	NA	NA	NA	NA
WP_029886969.1\|3270634_3274342_+	methionine synthase	A0A140XBC7	Dickeya_phage	7.8e-16	68.3
WP_009685910.1\|3274503_3274722_+	DUF2970 domain-containing protein	NA	NA	NA	NA
WP_064314466.1\|3274999_3276076_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009685912.1\|3276290_3277943_+	nitrite/sulfite reductase	NA	NA	NA	NA
WP_029886967.1\|3277926_3278421_+	DUF934 domain-containing protein	NA	NA	NA	NA
WP_029886966.1\|3278683_3279487_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	7.3e-36	37.8
WP_029886965.1\|3279584_3280733_+	carboxypeptidase family protein	NA	NA	NA	NA
WP_029886964.1\|3280754_3281726_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_104148486.1\|3281722_3284044_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_029886962.1\|3284125_3284902_-	molecular chaperone	NA	NA	NA	NA
WP_029886961.1\|3284941_3285445_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_009685920.1\|3285448_3285979_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_029886960.1\|3285997_3286534_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_009685923.1\|3286564_3287092_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_029886959.1\|3287359_3289618_+	GAF domain-containing protein	B5LWN8	Feldmannia_species_virus	7.9e-27	22.2
WP_009685925.1\|3289624_3290086_+	response regulator	NA	NA	NA	NA
WP_064314465.1\|3290099_3292499_+	response regulator	Q8QNA2	Ectocarpus_siliculosus_virus	5.8e-12	26.1
WP_009685928.1\|3292972_3293215_+	hypothetical protein	NA	NA	NA	NA
WP_029886957.1\|3293345_3294422_+	cell division protein ZapE	NA	NA	NA	NA
WP_029886956.1\|3294418_3296308_-	propionyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	9.1e-53	29.3
WP_009685932.1\|3296486_3297353_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_029886955.1\|3297326_3298484_-	HPP family protein	NA	NA	NA	NA
WP_029886954.1\|3298736_3300053_-	sensor histidine kinase	NA	NA	NA	NA
WP_029886953.1\|3300049_3300718_-	response regulator transcription factor	NA	NA	NA	NA
WP_009685937.1\|3300718_3301033_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_029886952.1\|3301032_3301341_-	peptidase	NA	NA	NA	NA
WP_029886951.1\|3301542_3302622_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_150060258.1\|3302858_3304037_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4J5F8	uncultured_Caudovirales_phage	1.8e-208	92.8
3310321:3310335	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3308990 : 3350237

uncultured_Caudovirales_phage(25.0%)

holin,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150060260.1\|3308990_3310604_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	9.9e-149	47.9
WP_125920264.1\|3310600_3311044_-\|terminase	terminase small subunit	E5AGA2	Erwinia_phage	9.6e-30	52.9
WP_033735373.1\|3311051_3311243_-	hypothetical protein	NA	NA	NA	NA
WP_064314367.1\|3311239_3312121_-\|tail	tail fiber protein	A0A1L7DQA4	Ralstonia_phage	2.0e-10	42.9
WP_081264813.1\|3312120_3312780_-	DUF2612 domain-containing protein	B5AX81	Iodobacteriophage	6.0e-20	32.2
WP_064314369.1\|3312776_3314036_-	hypothetical protein	H9C1B3	Pectobacterium_phage	6.7e-60	35.6
WP_064314370.1\|3314036_3314402_-	hypothetical protein	A0A0P0IVU6	Acinetobacter_phage	3.9e-13	44.5
WP_081264814.1\|3314398_3315085_-	hypothetical protein	A0A2I7QJE8	Vibrio_phage	6.5e-41	44.3
WP_064314371.1\|3315081_3316017_-	hypothetical protein	A0A0P0HSL6	Acinetobacter_phage	4.9e-15	23.1
WP_064314372.1\|3316009_3316312_-	hypothetical protein	A0A2I7R3Z4	Vibrio_phage	4.6e-07	39.8
WP_150060261.1\|3316308_3316941_-	hypothetical protein	L0MX82	Edwardsiella_phage	2.9e-19	36.7
WP_064314374.1\|3316937_3318740_-	hypothetical protein	H9C0G0	Vibrio_phage	5.1e-21	24.6
WP_081264819.1\|3318736_3318919_-	hypothetical protein	B5AX68	Iodobacteriophage	2.1e-07	57.5
WP_064314375.1\|3318888_3319368_-	hypothetical protein	NA	NA	NA	NA
WP_064314376.1\|3319364_3319769_-	hypothetical protein	NA	NA	NA	NA
WP_064314377.1\|3319783_3320914_-	DUF3383 family protein	H9C0F4	Vibrio_phage	1.0e-75	44.0
WP_115293805.1\|3320897_3321455_-	hypothetical protein	NA	NA	NA	NA
WP_125920263.1\|3321447_3321867_-	hypothetical protein	B5AX62	Iodobacteriophage	2.1e-10	41.1
WP_125920262.1\|3321866_3322364_-	hypothetical protein	A0A2I7QQZ3	Vibrio_phage	1.0e-32	45.3
WP_125920261.1\|3322360_3322798_-	DUF4054 domain-containing protein	NA	NA	NA	NA
WP_125920260.1\|3322804_3322990_-	hypothetical protein	NA	NA	NA	NA
WP_125920259.1\|3323036_3323429_-	hypothetical protein	NA	NA	NA	NA
WP_150060262.1\|3323439_3324426_-	DUF2184 domain-containing protein	L7TMZ5	Rhizobium_phage	5.7e-22	28.0
WP_064314384.1\|3324438_3324951_-	hypothetical protein	NA	NA	NA	NA
WP_064314385.1\|3324950_3326057_-	DUF2213 domain-containing protein	H9C0E3	Vibrio_phage	2.4e-53	42.5
WP_064314386.1\|3326060_3326852_-	hypothetical protein	A0A2I7QN95	Vibrio_phage	5.7e-57	45.5
WP_081264817.1\|3326919_3328344_-	DUF1073 domain-containing protein	B5AX38	Iodobacteriophage	8.3e-107	48.3
WP_054830717.1\|3328370_3328703_-\|holin	phage holin, lambda family	A0A2H4J1U5	uncultured_Caudovirales_phage	3.5e-53	90.9
WP_064314387.1\|3329197_3329518_-	hypothetical protein	NA	NA	NA	NA
WP_064314388.1\|3329709_3330381_-	hypothetical protein	A0A0H5AWB8	Pseudomonas_phage	2.2e-57	54.3
WP_064314389.1\|3330520_3330880_-	hypothetical protein	F8TUQ5	EBPR_podovirus	6.0e-06	35.7
WP_150060263.1\|3330876_3331179_-	DUF1364 family protein	A0A2K8HR56	Pseudomonas_phage	5.9e-23	52.9
WP_150060264.1\|3331178_3331595_-	NinB family protein	A0A2H4JA22	uncultured_Caudovirales_phage	1.5e-72	93.5
WP_150060265.1\|3331587_3331902_-	hypothetical protein	NA	NA	NA	NA
WP_064314390.1\|3331898_3332234_-	hypothetical protein	A0A2H4JG78	uncultured_Caudovirales_phage	6.8e-28	61.3
WP_024717836.1\|3332233_3332743_-	hypothetical protein	H2BDI1	Pseudomonas_virus	6.9e-56	67.1
WP_150060266.1\|3332739_3332931_-	hypothetical protein	A0A2H4IZH6	uncultured_Caudovirales_phage	8.0e-26	95.2
WP_150060267.1\|3332930_3333737_-	ATP-binding protein	A0A2H4J3E5	uncultured_Caudovirales_phage	2.4e-143	97.4
WP_150060313.1\|3333726_3334533_-	hypothetical protein	A0A2H4J580	uncultured_Caudovirales_phage	4.2e-148	93.7
WP_150060268.1\|3334532_3334901_-	hypothetical protein	NA	NA	NA	NA
WP_150060269.1\|3334897_3335698_-	Rha family transcriptional regulator	A0A2I7RX10	Vibrio_phage	1.7e-53	49.0
WP_150060270.1\|3335818_3336031_-	hypothetical protein	NA	NA	NA	NA
WP_027907143.1\|3336051_3336258_-	hypothetical protein	NA	NA	NA	NA
WP_019471837.1\|3336320_3336500_-	hypothetical protein	NA	NA	NA	NA
WP_019471838.1\|3336518_3336707_-	hypothetical protein	B5WZX7	Pseudomonas_phage	6.5e-12	59.7
WP_033692338.1\|3336737_3336941_-	helix-turn-helix domain-containing protein	W6MWX8	Pseudomonas_phage	4.2e-25	88.1
WP_150060271.1\|3336909_3337758_+	helix-turn-helix domain-containing protein	W6MVG5	Pseudomonas_phage	2.4e-106	71.3
WP_150060272.1\|3337846_3338404_+	hypothetical protein	NA	NA	NA	NA
WP_049276174.1\|3338855_3339320_+	hypothetical protein	NA	NA	NA	NA
WP_150060273.1\|3339396_3339606_+	hypothetical protein	A0A0H5ARH3	Pseudomonas_phage	7.0e-15	65.0
WP_150060274.1\|3339685_3340288_+	hypothetical protein	A0A142IE63	Pseudomonas_phage	1.1e-28	35.4
WP_125855381.1\|3340873_3341128_+	hypothetical protein	NA	NA	NA	NA
WP_061550579.1\|3341124_3341370_+	hypothetical protein	NA	NA	NA	NA
WP_125855382.1\|3341366_3341561_+	hypothetical protein	NA	NA	NA	NA
WP_125855383.1\|3341836_3342697_+	ATP-binding protein	A0A1B1P9H8	Acinetobacter_phage	3.2e-69	59.7
WP_125855384.1\|3342693_3343200_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	4.2e-45	70.2
WP_125855385.1\|3343217_3343688_+	hypothetical protein	A0A2D2W628	Pectobacterium_phage	6.9e-18	37.7
WP_125855386.1\|3343930_3344443_+	hypothetical protein	A0A2H4JAQ1	uncultured_Caudovirales_phage	1.6e-07	42.4
WP_125855388.1\|3346441_3347044_+	hypothetical protein	A0A2H4J7W7	uncultured_Caudovirales_phage	8.7e-58	70.6
WP_064314413.1\|3347089_3347389_-	hypothetical protein	NA	NA	NA	NA
WP_064314414.1\|3347885_3348155_+	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	9.0e-23	68.5
WP_064314415.1\|3348151_3348703_+	hypothetical protein	A0A0S2SY59	Pseudomonas_phage	6.0e-13	36.2
WP_054882115.1\|3348749_3349034_+	hypothetical protein	NA	NA	NA	NA
WP_150060275.1\|3349085_3349823_+	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	6.1e-122	82.4
WP_150060276.1\|3350024_3350237_+	AlpA family phage regulatory protein	A0A2H4J8C8	uncultured_Caudovirales_phage	1.5e-33	98.6

DBSCAN-SWA_8

4523684 : 4618758

103

Pseudomonas_phage(40.43%)

portal,holin,head,protease,terminase,tail,capsid,tRNA,integrase

attL 4589822:4589838|attR 4613265:4613281

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009685352.1\|4523684_4524602_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_009685351.1\|4524605_4525004_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_009685350.1\|4525120_4527649_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.3e-22	23.4
WP_009685349.1\|4527676_4529158_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_009685348.1\|4529217_4529676_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_029885740.1\|4530089_4530488_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_029885741.1\|4530492_4531248_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_009685345.1\|4531313_4532654_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_029885742.1\|4532670_4533522_-	dihydropteroate synthase	NA	NA	NA	NA
WP_009685343.1\|4533530_4535435_-\|protease	ATP-dependent zinc metalloprotease FtsH	I3UL75	Ostreococcus_lucimarinus_virus	4.2e-114	48.3
WP_009685342.1\|4535638_4536265_-	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_009685341.1\|4536367_4536676_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_080709202.1\|4536835_4537276_-	MFS transporter	NA	NA	NA	NA
WP_104148460.1\|4537253_4537730_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_029885745.1\|4537732_4540954_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_003249935.1\|4541059_4542196_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	2.1e-44	32.0
WP_009685336.1\|4542512_4543316_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_009685335.1\|4543329_4544454_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	4.0e-24	35.5
WP_009685334.1\|4544650_4546576_-	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	1.6e-150	49.6
WP_009685333.1\|4546677_4547235_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_029887492.1\|4547429_4549103_+	DNA repair protein RecN	NA	NA	NA	NA
WP_009685331.1\|4549261_4549666_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA
WP_009685330.1\|4549763_4550300_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_009685329.1\|4550357_4550792_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_029887491.1\|4550955_4551438_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.4e-26	43.3
WP_050492246.1\|4551560_4552499_-	RHS repeat-associated core domain-containing protein	A0A1W5K0N1	Bacteriophage	3.9e-20	47.4
WP_029887489.1\|4552739_4553507_-	FCD domain-containing protein	NA	NA	NA	NA
WP_029887488.1\|4553762_4555433_+	L-lactate permease	NA	NA	NA	NA
WP_009685323.1\|4555496_4556642_+	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA
WP_029887487.1\|4556717_4559528_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_104148204.1\|4559488_4559731_-	hypothetical protein	NA	NA	NA	NA
WP_009685320.1\|4559803_4560094_+	hypothetical protein	NA	NA	NA	NA
WP_125855627.1\|4560795_4561083_+	transcriptional regulator	NA	NA	NA	NA
WP_029887485.1\|4561079_4561445_+	hypothetical protein	NA	NA	NA	NA
WP_050492245.1\|4561462_4561747_-	hypothetical protein	H2BDA1	Pseudomonas_phage	1.3e-19	63.1
WP_064590892.1\|4561743_4562127_-	hypothetical protein	J7HXL1	Pseudomonas_phage	1.8e-24	54.2
WP_017147738.1\|4562123_4562570_-	structural protein	A0A2R3UAM8	Myoviridae_environmental_samples	7.2e-33	53.4
WP_024718023.1\|4562630_4562855_-	hypothetical protein	NA	NA	NA	NA
WP_148661763.1\|4562872_4563727_-	hypothetical protein	NA	NA	NA	NA
WP_080709187.1\|4563735_4564038_-	hypothetical protein	A0A1S5R1J4	Pseudomonas_phage	1.5e-21	49.0
WP_150060289.1\|4564128_4570542_-	DUF1983 domain-containing protein	A0A2H4J0B1	uncultured_Caudovirales_phage	0.0e+00	72.0
WP_029885595.1\|4570542_4570941_-	hypothetical protein	A0A2H4IYI8	uncultured_Caudovirales_phage	7.5e-66	86.4
WP_029885594.1\|4570943_4571546_-	hypothetical protein	A0A2H4J0R3	uncultured_Caudovirales_phage	2.3e-103	87.0
WP_029885593.1\|4571545_4572130_-	hypothetical protein	A0A2H4IYI9	uncultured_Caudovirales_phage	2.6e-59	55.2
WP_029885592.1\|4572171_4575387_-\|tail	phage tail tape measure protein	A0A2D1GNQ1	Pseudomonas_phage	1.4e-93	35.6
WP_125920177.1\|4575443_4575770_-	hypothetical protein	NA	NA	NA	NA
WP_029885590.1\|4576076_4576406_-	hypothetical protein	A0A2D1GNT5	Pseudomonas_phage	7.9e-29	62.4
WP_029885589.1\|4576418_4576916_-	hypothetical protein	A0A2D1GNF2	Pseudomonas_phage	1.1e-71	80.6
WP_029885588.1\|4576970_4577357_-	DUF3168 domain-containing protein	A0A2D1GNT4	Pseudomonas_phage	4.4e-55	85.9
WP_029885587.1\|4577349_4577850_-	HK97 gp10 family phage protein	A0A2D1GNN2	Pseudomonas_phage	4.0e-64	70.9
WP_029885586.1\|4578032_4578359_-\|head	phage head closure protein	A0A2D1GNG1	Pseudomonas_phage	5.2e-25	62.1
WP_029885585.1\|4578358_4578655_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	4.3e-34	71.7
WP_033744421.1\|4578655_4578907_-	hypothetical protein	NA	NA	NA	NA
WP_029885583.1\|4578958_4580161_-\|capsid	phage major capsid protein	A0A2H4J8D1	uncultured_Caudovirales_phage	4.0e-147	64.9
WP_029885582.1\|4580157_4580799_-\|head,protease	HK97 family phage prohead protease	A0A2H4JA51	uncultured_Caudovirales_phage	1.9e-87	76.4
WP_029885581.1\|4580785_4582000_-\|portal	phage portal protein	A0A2H4JFN7	uncultured_Caudovirales_phage	3.9e-166	71.4
WP_080709186.1\|4582002_4583691_-\|terminase	terminase large subunit	A0A2H4JDK9	uncultured_Caudovirales_phage	9.4e-259	83.4
WP_029885579.1\|4583687_4584233_-\|terminase	terminase	S4TNN3	Salmonella_phage	3.7e-15	35.1
WP_080709185.1\|4584388_4584949_-	hypothetical protein	NA	NA	NA	NA
WP_029885577.1\|4585032_4585371_-	HNH endonuclease	B5WZZ4	Pseudomonas_phage	3.4e-27	51.9
WP_029885576.1\|4585370_4585589_-	hypothetical protein	NA	NA	NA	NA
WP_017147910.1\|4585588_4585870_-\|holin	phage holin family protein	A0A2H4J0H1	uncultured_Caudovirales_phage	1.3e-43	94.6
WP_029885575.1\|4585870_4586245_-	hypothetical protein	A0A2H4J7X6	uncultured_Caudovirales_phage	7.3e-63	96.0
WP_012313238.1\|4586494_4587004_-	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	2.2e-86	94.7
WP_024717999.1\|4587229_4587619_-	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	7.1e-37	57.0
WP_024717998.1\|4587615_4587903_-	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	5.8e-12	41.4
WP_029885940.1\|4587899_4588400_-	hypothetical protein	NA	NA	NA	NA
WP_029885939.1\|4588386_4589799_-	AAA family ATPase	A0A0A0YUG7	Pseudomonas_phage	8.0e-187	72.5
WP_150060314.1\|4589795_4590434_-	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	7.6e-44	45.3
4589822:4589838	attL	NA	NA	NA	NA
WP_050492199.1\|4590600_4591338_-	helix-turn-helix domain-containing protein	A0A0U4IBP5	Pseudomonas_phage	1.6e-24	52.3
WP_029885936.1\|4591349_4591580_-	hypothetical protein	A0A1W6JTF8	Pseudomonas_phage	1.1e-16	55.3
WP_029885935.1\|4591576_4592182_-	hypothetical protein	NA	NA	NA	NA
WP_029885934.1\|4592178_4592490_-	hypothetical protein	NA	NA	NA	NA
WP_029885933.1\|4592486_4593257_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	9.8e-22	53.6
WP_029885932.1\|4593253_4593544_-	hypothetical protein	NA	NA	NA	NA
WP_033744516.1\|4593540_4593810_-	hypothetical protein	NA	NA	NA	NA
WP_029885930.1\|4593802_4594138_-	hypothetical protein	NA	NA	NA	NA
WP_064590906.1\|4594275_4594578_-	hypothetical protein	A0A2H4JF66	uncultured_Caudovirales_phage	4.6e-07	58.9
WP_029885928.1\|4594691_4595432_+	Cro/Cl family transcriptional regulator	A0A0H5BBV1	Pseudomonas_phage	5.0e-47	63.8
WP_029885927.1\|4595567_4595966_+	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	1.9e-32	67.2
WP_029885926.1\|4595994_4596267_+	hypothetical protein	NA	NA	NA	NA
WP_029885925.1\|4596371_4596887_+	Rha protein	A0A2D1GLJ3	Escherichia_phage	1.7e-25	37.9
WP_050492198.1\|4596986_4597340_+	carbon storage regulator	NA	NA	NA	NA
WP_080709209.1\|4597498_4597795_-	hypothetical protein	NA	NA	NA	NA
WP_029885923.1\|4597920_4598697_+	hypothetical protein	NA	NA	NA	NA
WP_148661764.1\|4598700_4598976_+	excisionase	NA	NA	NA	NA
WP_029885922.1\|4598855_4600034_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	9.7e-178	80.5
WP_029885921.1\|4600017_4600566_+	hypothetical protein	NA	NA	NA	NA
WP_064314280.1\|4600833_4602081_+\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	2.4e-110	46.6
WP_047595825.1\|4602283_4603162_-	WYL domain-containing protein	NA	NA	NA	NA
WP_047595826.1\|4603511_4603757_+	hypothetical protein	NA	NA	NA	NA
WP_047595827.1\|4603812_4606167_-	AAA family ATPase	U5XGM6	Phormidium_phage	4.7e-67	35.8
WP_064314279.1\|4606176_4607430_-	hypothetical protein	NA	NA	NA	NA
WP_047595829.1\|4607524_4608160_-	hypothetical protein	NA	NA	NA	NA
WP_064314278.1\|4608159_4610031_-	hypothetical protein	NA	NA	NA	NA
WP_064314277.1\|4610002_4612117_-	hypothetical protein	NA	NA	NA	NA
WP_064314276.1\|4612446_4612776_+	hypothetical protein	NA	NA	NA	NA
WP_064314275.1\|4612861_4613830_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	1.5e-59	42.5
4613265:4613281	attR	NA	NA	NA	NA
WP_104148206.1\|4613905_4614910_+	YqaJ viral recombinase family protein	A6XMH8	Bacillus_virus	7.7e-51	39.9
WP_104148207.1\|4615000_4615951_+	hydrolase or metal-binding protein	NA	NA	NA	NA
WP_064314273.1\|4615922_4616420_+	DNA repair protein RadC	NA	NA	NA	NA
WP_064314272.1\|4616429_4616612_+	hypothetical protein	NA	NA	NA	NA
WP_064314271.1\|4616709_4618758_-\|protease	BREX system Lon protease-like protein BrxL	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage