CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP035808	Spirochaeta perfilievii strain P plasmid pSpe, complete sequence	0 crisprs	PD-DExK,PrimPol,RT	0	0	3	0
NZ_CP035807	Spirochaeta perfilievii strain P chromosome, complete genome	4 crisprs	DinG,DEDDh,WYL,PD-DExK,csa3,cas3,PrimPol,csn2,cas2,cas1,cas9	0	24	6	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4174

Shigella_phage(100.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149569645.1\|1147_1846_-	hypothetical protein	NA	NA	NA	NA
WP_149569646.1\|1838_2039_-	hypothetical protein	NA	NA	NA	NA
WP_149569647.1\|2188_2869_-	hypothetical protein	NA	NA	NA	NA
WP_149568881.1\|3038_3338_+\|transposase	transposase	NA	NA	NA	NA
WP_149569648.1\|3334_4174_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-21	31.4

DBSCAN-SWA_2

10211 : 16220

Streptococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149569670.1\|10211_11252_+	DNA (cytosine-5-)-methyltransferase	M1PSQ0	Streptococcus_phage	1.1e-71	43.8
WP_149569671.1\|11413_12400_-	DUF1016 family protein	A0A0U2BZN7	Salmonella_phage	1.1e-22	37.8
WP_149569651.1\|12421_13297_-	hypothetical protein	NA	NA	NA	NA
WP_149569652.1\|13300_14218_-	AAA family ATPase	E9LUK9	Lactobacillus_phage	1.6e-07	24.6
WP_149569653.1\|15255_15459_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_149569654.1\|15623_16220_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	1.7e-05	26.6

DBSCAN-SWA_3

23856 : 24777

Lake_Baikal_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149569664.1\|23856_24777_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	2.1e-31	39.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP035807

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP035807_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035807_1

862948-863044

Orphan

Consensus_repeat	Method
GAATGGGTCAAGGCCTAAGAATGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP035807_1

>merge|NZ_CP035807|1|862948-863044|CRISPRCasFinder
GAATGGGTCAAGGCCTAAGAATGGGTCAAGGCCTAAGAATGGGTCGAGGAATGGGTCGAGGAATGGGCCGAGGAATGGGTCAAGGCCTAAGAATGGG

>NZ_CP035807|1|1|862948-863044|CRISPRCasFinder
GAATGGGTCAAGGCCTAAGAATGGG	TCAAGGCCTAAGAATGGGTCGAGGAATGGGTCGAGGAATGGGCCGAG
GAATGGGTCAAGGCCTAAGAATGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035807.1\|WP_149567141.1\|859176_859866_-\|DUF554-family-protein	unknown	unknown	gnl\|CDD\|377371
NZ_CP035807.1\|WP_149567147.1\|863062_863422_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224350
NZ_CP035807.1\|WP_149567148.1\|863423_864260_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224071
NZ_CP035807.1\|WP_149567149.1\|864249_865104_+\|(4Fe-4S)-binding-protein	unknown	unknown	gnl\|CDD\|349764
NZ_CP035807.1\|WP_149569573.1\|859865_860438_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|235662
NZ_CP035807.1\|WP_149567151.1\|865490_866831_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223869
NZ_CP035807.1\|WP_149567153.1\|868120_868891_+\|3'-5'-exonuclease-domain-containing-protein-2	unknown	unknown	gnl\|CDD\|176653
NZ_CP035807.1\|WP_149567150.1\|865116_865398_+\|DUF134-domain-containing-protein	unknown	unknown	gnl\|CDD\|224261
NZ_CP035807.1\|WP_149567145.1\|862383_862764_+\|dinitrogenase-iron-molybdenum-cofactor	unknown	unknown	gnl\|CDD\|238431
NZ_CP035807.1\|WP_149567154.1\|868987_869965_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP035807.1\|WP_149567156.1\|871407_873162_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236901
NZ_CP035807.1\|WP_149567138.1\|854547_855540_-\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381377
NZ_CP035807.1\|WP_149567140.1\|857660_859184_+\|DUF342-domain-containing-protein	unknown	unknown	gnl\|CDD\|377177
NZ_CP035807.1\|WP_149567152.1\|866952_868071_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377072
NZ_CP035807.1\|WP_149567142.1\|860527_861028_-\|DUF2202-domain-containing-protein	unknown	unknown	gnl\|CDD\|153107
NZ_CP035807.1\|WP_149567143.1\|861099_861936_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293799
NZ_CP035807.1\|WP_149567155.1\|870171_870459_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|214636
NZ_CP035807.1\|WP_149567139.1\|855672_857616_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP035807.1\|WP_149567144.1\|862000_862330_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224350
NZ_CP035807.1\|WP_149567137.1\|853858_854551_-\|response-regulator	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NZ_CP035807.1\|WP_149567141.1\|859176_859866_-\|DUF554-family-protein	gnl\|CDD\|377371	pfam04474, DUF554, Protein of unknown function (DUF554). Family of uncharacterized prokaryotic proteins. Multiple predicted transmembrane regions suggest that the region is membrane associated.	1.76413e-86
NZ_CP035807.1\|WP_149567147.1\|863062_863422_+\|hypothetical-protein	gnl\|CDD\|224350	COG1433, COG1433, Uncharacterized conserved protein [Function unknown].	1.13528e-20
NZ_CP035807.1\|WP_149567148.1\|863423_864260_+\|hypothetical-protein	gnl\|CDD\|224071	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion].	3.25905e-83
NZ_CP035807.1\|WP_149567149.1\|864249_865104_+\|(4Fe-4S)-binding-protein	gnl\|CDD\|349764	cd03110, SIMIBI_bact_arch, bacterial and archaeal subfamily of SIMIBI. Uncharacterized bacterial and archaeal subfamily of SIMIBI superfamily. Proteins in this superfamily contain an ATP-binding domain and use energy from hydrolysis of ATP to transfer electron or ion. The specific function of this family is unknown.	2.02743e-89
NZ_CP035807.1\|WP_149569573.1\|859865_860438_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|235662	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase.	9.04751e-90
NZ_CP035807.1\|WP_149567151.1\|865490_866831_+\|CBS-domain-containing-protein	gnl\|CDD\|223869	COG0798, ACR3, Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism].	2.5663e-36
NZ_CP035807.1\|WP_149567153.1\|868120_868891_+\|3'-5'-exonuclease-domain-containing-protein-2	gnl\|CDD\|176653	cd06141, WRN_exo, DEDDy 3'-5' exonuclease domain of WRN and similar proteins. WRN is a unique RecQ DNA helicase exhibiting an exonuclease activity. It contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. Mutations in the WRN gene cause Werner syndrome, an autosomal recessive disorder associated with premature aging and increased susceptibility to cancer and type II diabetes. WRN interacts with key proteins involved in DNA replication, recombination, and repair. It is believed to maintain genomic stability and life span by participating in DNA processes. WRN is stimulated by Ku70/80, an important regulator of genomic stability.	1.81089e-45
NZ_CP035807.1\|WP_149567150.1\|865116_865398_+\|DUF134-domain-containing-protein	gnl\|CDD\|224261	COG1342, COG1342, Predicted DNA-binding proteins [General function prediction only].	5.81086e-27
NZ_CP035807.1\|WP_149567145.1\|862383_862764_+\|dinitrogenase-iron-molybdenum-cofactor	gnl\|CDD\|238431	cd00851, MTH1175, This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).	1.71689e-25
NZ_CP035807.1\|WP_149567154.1\|868987_869965_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.68675e-14
NZ_CP035807.1\|WP_149567156.1\|871407_873162_-\|hypothetical-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	3.92853e-35
NZ_CP035807.1\|WP_149567138.1\|854547_855540_-\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381377	cd19151, AKR_AKR14A2, Salmonella enterica aldo-keto reductase (AKR) and similar protein. Salmonella enterica AKR is a founding member of aldo-keto reductase family 14 member A2 (AKR14A2).	0
NZ_CP035807.1\|WP_149567140.1\|857660_859184_+\|DUF342-domain-containing-protein	gnl\|CDD\|377177	pfam03961, FapA, Flagellar Assembly Protein A. Members of this family include FapA (flagellar assembly protein A), found in Vibrio vulnificus. The synthesis of flagella allows bacteria to respond to chemotaxis by facilitating motility. Studies examining the role of FapA show that the loss or delocalization of FapA results in a complete failure of the flagellar biosynthesis and motility in response to glucose mediated chemotaxis. The polar localization of FapA is required for flagellar synthesis, and dephosphorylated EIIAGlc (Glucose-permease IIA component) inhibited the polar localization of FapA through direct interaction.	2.15461e-64
NZ_CP035807.1\|WP_149567152.1\|866952_868071_+\|hypothetical-protein	gnl\|CDD\|377072	pfam03595, SLAC1, Voltage-dependent anion channel. This family of transporters has ten alpha helical transmembrane segments. The structure of a bacterial homolog of SLAC1 shows it to have a trimeric arrangement. The pore is composed of five helices with a conserved Phe residue involved in gating. One homolog, Mae1 from the yeast Schizosaccharomyces pombe, functions as a malate uptake transporter; another, Ssu1 from Saccharomyces cerevisiae and other fungi including Aspergillus fumigatus, is characterized as a sulfite efflux pump; and TehA from Escherichia coli is identified as a tellurite resistance protein by virtue of its association in the tehA/tehB operon. In plants, this family is found in the stomatal guard cells functioning as an anion-transporting pore. Many homologs are incorrectly annotated as tellurite resistance or dicarboxylate transporter (TDT) proteins.	4.29715e-05
NZ_CP035807.1\|WP_149567142.1\|860527_861028_-\|DUF2202-domain-containing-protein	gnl\|CDD\|153107	cd01048, Ferritin_like_AB2, Uncharacterized family of ferritin-like proteins found in archaea and bacteria. Ferritin-like domain found in archaea and bacteria, subgroup 2 (Ferritin_like_AB2). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. The conserved residues of a diiron center are present within the putative active site.	1.49375e-35
NZ_CP035807.1\|WP_149567143.1\|861099_861936_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293799	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes Methanocaldococcus jannaschii 7,8-dihydropterin-6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate synthase (EC 2.5.1.15), a folate biosynthetic enzyme also known as dihydropteroate synthase and 7,8 dihydropteroate synthase. Thermoanaerobacter tengcongensis Tflp is a ferredoxin-like member. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.91123e-90
NZ_CP035807.1\|WP_149567155.1\|870171_870459_-\|RNA-binding-protein	gnl\|CDD\|214636	smart00360, RRM, RNA recognition motif.	7.61652e-18
NZ_CP035807.1\|WP_149567139.1\|855672_857616_+\|hypothetical-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.04388e-28
NZ_CP035807.1\|WP_149567144.1\|862000_862330_+\|hypothetical-protein	gnl\|CDD\|224350	COG1433, COG1433, Uncharacterized conserved protein [Function unknown].	1.97216e-14
NZ_CP035807.1\|WP_149567137.1\|853858_854551_-\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.61968e-66

>NZ_CP035807.1|WP_149567145.1|862383_862764_+|dinitrogenase-iron-molybdenum-cofactor
MCIYTELKEDNMRIGIPTNDRKTVEGHFGHCKEFVLFDIEDGKVTNTSYVTPPAHAPGVIPKFLADNKTNAIICGGMGQMAINIFKENNIDVILGAQGSVDENLQEFIKGELESTGTACEHDHDHH
>NZ_CP035807.1|WP_149567144.1|862000_862330_+|hypothetical-protein
MIAIPVVSKKIKSNISICFGRCNYFAVVDDNGQITFLENKCKNSPAEAGIIAVKLLLENNIKIIISSNIGSTTKSYLKNSSITVYDAGNLETADKALSFLKLNKLVKMI
>NZ_CP035807.1|WP_149567143.1|861099_861936_+|MBL-fold-metallo-hydrolase
MVKIRVISNNNALEGFTNEHGFSVLIETETSSTLLDTGSGEAFIHNINILSIDISNIDSLVLSHGHFDHCGNINYILNNNNRIKIYHHPQLLVERYSIHKDRDPMVKFIGVNEVNKKSLKNCHSFLTEDITKISNNIFITGSIPRLSNEDTGGPFFFDTIGEKRDLILDDQAIWLNTKKGLLIITGCCHSGIINTVEYIKKYSGIDRVYGIVGGLHLSKALDKRVIETTKYLNSLNLTMIAPGHCTGDHIVEKLNKDLNCRVIDVYAGLDIILDVNID
>NZ_CP035807.1|WP_149567142.1|860527_861028_-|DUF2202-domain-containing-protein
MEEVMKKIIGLILLSLGGFTSFIFGENFGADGALNESNYTLEEMLEYAIEDEYLALNEYEALIEKFGPIKPFTNIIESEKTHIAYLKELYSSYNIEIPKVDTTSHLYIPKNVEEAAKIGVDAEVKNIAMYNKFLKEDLPLDVRNVFEFLKKASENHLKAFRRQLER
>NZ_CP035807.1|WP_149569573.1|859865_860438_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MKELKETQSNKVKNASIDRGIIIVNTGDGKGKSSSAFGTVFRAVGQGLNVAVIQFIKGSWTTGEMNIFKKFESITHIVSGAGFTWDTQDKEKDILAALKGWEVAKEICRDKDNKFQLLVLDEINLALAYKFLDIKEVVEVLANKPDSLNIILTGRNAPSEVIEIADTVTEMVMIKHAFESGIKAQKGIEF
>NZ_CP035807.1|WP_149567141.1|859176_859866_-|DUF554-family-protein
MLGTYVNTLVIILGSILGLLIKNGLKEKYKTIVMNGVGLSVLFIGMSTTLNGILNGGEPILFIISIVIGGLIGEFIDIDLRLNRLGDSLQNRVGRGGEHNIAKGFVTASLIFCVGTMAILGSLESGLQGKHDMLYAKSVLDGVTSIILTSTLGIGVIFSSIAVLIYQGSITLLAKFIEPVLTVETIREISIIGGILIFSLGLNLLNIKKIKTANYLPAILIPPIYYLFI
>NZ_CP035807.1|WP_149567140.1|857660_859184_+|DUF342-domain-containing-protein
MDKDKYHHIKDKTISRVNSILEDKYINDLINETTDMLDEITSGDDIPEQEQKVFPGAINIVMEPMKMTATLEILKPINSSNEITIGKVKELINELGDFFESRVDWALIHDIYSRVIDDDEIVPPEIIARGIKVEAYIPEHIILEEKLLSTYMPLITSHGRADYHKINSLVFVKKGEFIGKIIPSTPGVVGKKLDGSDIPFPKMIINNYVADQNIYIEDNKLFSKIDGTFKIVDNRLMVAPCLLIQSDIDYHTGDIVFTGDVEIGGSIRSGFSVTSGGDLLIKGAVEPTNISCNSNLVVNEGIFGSKTSLIDVKGNLNTKHIENVRLKSIGNLFVRNSIMTSHILTNGKITMDKNGTILGSIVYSLNGITCHNVGNELGVHTEIYLGIDYIVMEKLKEIQEVSTIITNEMEELQQEINIMETREERDKGKYLFLSLKNRLNSLNNHSRSLLKSLDKNDRSSLTVTGTIYPGSRINICHISIDIKEPLKNVTLFLNKDHGRIDWTGFTK
>NZ_CP035807.1|WP_149567139.1|855672_857616_+|hypothetical-protein
MRFKILFLLFILMNSSLYSQSFITKDLSNKSVLLLNSYHKGFRWTDDITHEVIKGLSPYEIELHIEFMDSKRGWDREYQLKLADLLKYKVGRHNYDLILTSDDNAFNFVIENRAEIFKNKPIIFCGVNNLLADKASKYRDITGINEEIDIIGSLDLIKKLHPKIEKISIITDNTTTGQRLQKGINEVIPLYPELSIKLDYNLTGDELINLVESSGKDTVILFTLFYTDKNNDYYENILSEIYKVSINPIYGTWDFNLNNGIIGGVLVTGSSQGEFVAQKALEILGGKDINSIPIEYRTPTKTILDYNLLNRYAMDIPQNSQIELINKPDTFYNKYGYIINIIITIVVILLLSLLIISYAFLKSKRAESELNNYKAHLEEVVLERTEELQENIIELKNTQDELVESKKMAYLGSLVAGVAHKLNTPIGIGITSVTHLRSKSLKLHKEFSLNQLKKSSLMDYLLESKEALDLINSNLNKAADIITVFKQVAVDEIEDKKDRVNLSELVHGVVNRIISPIKGFNFDINIFCPDTIYLDTSPEILITIFTNLIRNSLEHGLKDLMYGSINIIINRDKDIINIKYYDSGHGISKDVIGRIFEPFFSTKKSNGNLGLGLNIVYNLVVNKLKGSIKCVNENDYTIFYIKLSVNK
>NZ_CP035807.1|WP_149567138.1|854547_855540_-|L-glyceraldehyde-3-phosphate-reductase
MEYIADKDRYNSMEYKRCGSSGILLPKISLGLWHNFSDSTVFENSRDMARVSFDLGITHFDLANNYGPPPGSAEENFGLILKKDLKPYRDELIISTKAGYDMWPGPYGNWGSRKYLISSCDQSLKRLGLDYVDVFYHHRPDPDTPLLETMTALDYIVRSGRAMYIGLSNYYLPEKAKEAFAILKDLGTPCLLHQVKYNMFDRRVENGLLDLHDSENIGVVTFSPLEKGILTNKYLNGIPNDSRAKKDGRFLKPDDITDDVVSRVLKLNSIAQSRGQTLAQMSLSWNLRHKSVSSVIIGASRSSQIKDCIGALENSEFSKDELDLIDKIVK
>NZ_CP035807.1|WP_149567137.1|853858_854551_-|response-regulator
MTKKHIAIIDDEISIQKTLSVALEAQGYTTTIYNSSSEALGKIKVDPPDLIILDIMMPGVDGITFCSIFRKMEYNIPIIFISSIVDEITKIEALERGGDDYLAKPFSIKELLVRVAVCLRRVDLYQTTSKRFKSNLSGFFIDDGAYQIFFNGSLINMSVTEFRIFKTLFESPNIVFSRDELMAQAYPEDTYISDRNVDTHITRIRKKIINIYSDFKGIESVYGLGYRYKK
>NZ_CP035807.1|WP_149567147.1|863062_863422_+|hypothetical-protein
MIIGIPVKEKGADPLIDERFGRCNYFCIIDDKEQITFLENSAKDQASGAGGQSVKLLADEDVDTIISPHIGPKAMDAIKLLNINVFSLGDSITVTQALKNIKAGKLELVDSEKKGLKRV
>NZ_CP035807.1|WP_149567148.1|863423_864260_+|hypothetical-protein
MNIVVLSGKGGTGKTTVSINLEAVSGNNTSLLDCDVEEPNSHLFCTKPFDTIDDVGVYYPEISEDLCIHCGKCGSFCQFHAILNTKRANIVMPELCHDCGGCKLVCPVDAIEFKSRSIGSIRKGKTDKNQNFIDGILNTGEFSSTKIIQQVLKEGLTTDDRIIDAPPGSACAAVETVQGADLGLIVTEPTPFALSDMKMVVEMLENLNIETAVFINKSGENEEKLIEYCKEKKLPILGRLPFNNSYAQSYAEGKVLVNEFPEVKEIFTNLWRIIKDEY
>NZ_CP035807.1|WP_149567149.1|864249_865104_+|(4Fe-4S)-binding-protein
MSIKEIVFISGKGGTGKTTMTSSFIPRFENLVIADCDVDAPDLDILLKPQILTTEDFIATTKAVINSDKCLNCGKCISFCNFNAIEAGDKTPIIKESHCEGCKTCTLVCKPNAIEIKPYKTGVIYKSTTDYGSMIHARLTPGEEVSGRLVSEVRKRAKLTAENNNNEIIIIDGPPGIACNVISAITGSSLAIIVTEPTVSGFHDLVRVNDTANKLRVKCAVIINKFGLSDRYTKEIEDYCERNSISILGKVSLNKEILRSVNKLEIPNINNHDMVNKIKEIIYN
>NZ_CP035807.1|WP_149567150.1|865116_865398_+|DUF134-domain-containing-protein
MPRRRKNRNCRILDGDRNFKPSGIPRSELNKIILDLDEFEALRLCDYDGLNQIEAGEALGVSRGTVQRLLLSGRKKIVEAILDSNELIIKGNH
>NZ_CP035807.1|WP_149567151.1|865490_866831_+|CBS-domain-containing-protein
MINFISLLQKKLVIVIPIVMLLGFLFGIQKDVSFLKGGIIPLTFLMVYPMMVTLPLKKVLEGGDSKVQLTAQFINFAVTPFIAYGLGILFFPNSKFLALGLLLTGLLPTSGMTISWTGMAKGNMAAAVKMTVLGLLIGSLLTPVYIKFLMGASVEIDIIGIFIQVAEIVVLPLILGNITQKILISRFGMAHYQEKLKKNFPPFSTLGVIGIVFVAMALKAKSIMGNPSALLIIFIPLLLLYIINFLISTIIGKMFFKRDDAIALLYGTVLRNLSIALAIAMTAFGKEGADIALVVALGYIIQIQLSAWAVKFTDKVYGPAGVTESSNIMHYGIYTLHSRNTVNDALKMLATEDIHSIVVIDDLEKPIGILTQKVIIKLLANKTPKDTVISDCTLEPVITTGLHIPIEKIIKTMDENQEFKVLVTDVKENIIGVLTASDIIKSTINK
>NZ_CP035807.1|WP_149567152.1|866952_868071_+|hypothetical-protein
MNKKFSPLSFLSSLGAGGIAIIPFAFFQYTYHTKPGLVTFNAIDHGSLNFAQLGLFYFFETVMIIFTLIHFFLTFKNLKELNYWSKTDEFKTFTQDPLSNAALMTPFLSLAMTMNVFIGPIRFFIPFFSKNFQGMMLPALIALIILASVALYWEIKLLKISFVNSFDVSKINFGWLIQPFALGMIAVTASGIAAMSKTETYAHIGAFITFTMGSMALFLLAVKLNSIFKSHFAAKGLPAKQFMPSYLIVLPIVTILSIAGFRLTHYFHNFFHVDLHALGIIIIAGSFAFETWYLLFGLALLKNYLKDDFKLKEYYVSQWGLVCPFVAYGTLGTMMWRNFVPNLLLYVVIIISALTAITFFIILARKQIKYAK
>NZ_CP035807.1|WP_149567153.1|868120_868891_+|3'-5'-exonuclease-domain-containing-protein-2
MVILFMDNLNSIIDLKRLNLIKKQITPRESKKLEKKLSLLFKGFSKDSLNFISIIDRFNDPSFDQNKLEKYNTGTREIVIINRDYKIKDAISNILKEDFIGFDTEQRPTFKRGEKQKNFALIQIATKDFCYLFQTKYLHDIKPIIKIITNEKIIKVGFDLKNDNKEFKNQLNIEPKNIFDLSPFMKRNLLHKNQIGVKNSVALILLKQMQKSKKIAMSNWENRILNENQIKYASEDATAPYDIFSYLYNNFPTIIS
>NZ_CP035807.1|WP_149567154.1|868987_869965_-|helix-turn-helix-domain-containing-protein
MILAQKITKLRKQLGLSQEELAEKLEISRQSVSKWESTTSIPDLNKIIRLSELFGVTTDFLLKDDMELIDYTGEDKESGVLSISIEDTTNYIKTKVWLAKNISIGVLISILSIVPFLFLSALSEAEKGYLSEELAEGIGLTSLFVFITIAVIFFLRKSPQSLFIDELEKSNFDLSYGVRGIIVEKLQRFQGIYTKTLSLCTAMFIISVVPLFVSSLYTESDMILFLMLILMLVIVGVSLFILIPKVTENNCYNFLLGEGDFSKDRKLEIERDEKFAGFYWPLVTAGYIGWSLWTMEWGITWIIWPIAGIAFVGFTGLIRLLETKK
>NZ_CP035807.1|WP_149567155.1|870171_870459_-|RNA-binding-protein
MSTKLYIENINYNISYFELGSLFSKYGDIMHIDIINDIKSMKSKGSAFIEMADKKCAEKAMSALDKVIWMQRKISVKFAQKEERSNLSNRLYFPI
>NZ_CP035807.1|WP_149567156.1|871407_873162_-|hypothetical-protein
MDYVLYQFLAPLVAGFNILSILISFRYLKERISKIVLMFQLAALILLILEYMEFYLNNEYQMVFVIKLGHVVMQFYAVLWFIFCLNYTGYEKIINKRFITIIFAFILFNTFVVFTNDLHHQFYHNVSFLYKGGYSTIMAEYGFYFWIICSFNYIFIITGVIFIIVSYIRGGSYYRSQAQFIIIGYIVSLLVNIIYIFRLLPDFTKDFSAVTFAIISLCTFIGTYRFRILHYSPLSRNLVLQNMDDAIITLDLDYRIIDYNIKATRLFNLSERDLGQRVERGFLGTITGNVSTFFLNKDYVSFIKKIMDKSYNLNIRRLYDKQSDSKGIVLTFSDISDKIKLIDELDCSSKKIDNMQSFLVRSEKMAALGQLSAEISHEINNPLTYIKSNCHILQRYLDEDTFNNNIEDIKELVKDTNFGIQRISEVIKNMLSYTREDREDSEILYDINKGVESTLILARSVIRNRAELKLDLGCNIPKIKILGNKVDQVVLNLLVNSAHAIEEHRTDGIIKVSTYVNDCNIICDIYDNGIPINIEDRELLFEPFYTSTSTNNGTGLGLTLSRKIIESEFHGRLYIVDSIEKYFV

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Crispr_ID: NZ_CP035807_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035807_2

1189328-1189411

Orphan

Consensus_repeat	Method
TTCTTATTACCAACTCCCCATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP035807_2

>merge|NZ_CP035807|2|1189328-1189411|CRISPRCasFinder
TTCTTATTACCAACTCCCCATAATCCAATTTTTATCTTTATTATGATAATAACTAAGATCGTTTTTATTACCAACTCCCCATAA

>NZ_CP035807|2|2|1189328-1189411|CRISPRCasFinder
TTCTTATTACCAACTCCCCATAA	TCCAATTTTTATCTTTATTATGATAATAACTAAGATCG
TTTTTATTACCAACTCCCCATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035807.1\|WP_149567446.1\|1190456_1191431_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567442.1\|1187132_1187573_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567444.1\|1188100_1188928_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP035807.1\|WP_149567450.1\|1197217_1197493_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP035807.1\|WP_149567435.1\|1181168_1181645_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379267
NZ_CP035807.1\|WP_149567401.1\|1218694_1219042_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP035807.1\|WP_149567436.1\|1181886_1182138_+\|transposase	unknown	unknown	gnl\|CDD\|372671
NZ_CP035807.1\|WP_149567441.1\|1186146_1187124_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567447.1\|1191420_1194996_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567443.1\|1187793_1188072_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP035807.1\|WP_149567438.1\|1182813_1183371_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567449.1\|1196315_1197206_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP035807.1\|WP_149567448.1\|1195242_1196220_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567437.1\|1182403_1182775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223877
NZ_CP035807.1\|WP_149567453.1\|1217156_1217966_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567452.1\|1201791_1217109_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567402.1\|1218401_1218695_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567451.1\|1197535_1201792_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567440.1\|1185642_1185927_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567439.1\|1183373_1184771_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP035807.1\|WP_149567449.1\|1196315_1197206_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.01931e-44
NZ_CP035807.1\|WP_149567443.1\|1187793_1188072_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.40008e-05
NZ_CP035807.1\|WP_149567444.1\|1188100_1188928_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.80739e-38
NZ_CP035807.1\|WP_149567450.1\|1197217_1197493_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00108493
NZ_CP035807.1\|WP_149567435.1\|1181168_1181645_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379267	pfam13565, HTH_32, Homeodomain-like domain.	0.00136742
NZ_CP035807.1\|WP_149567436.1\|1181886_1182138_+\|transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	2.29511e-09
NZ_CP035807.1\|WP_149567401.1\|1218694_1219042_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	5.08041e-44
NZ_CP035807.1\|WP_149567437.1\|1182403_1182775_-\|hypothetical-protein	gnl\|CDD\|223877	COG0806, RimM, RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis].	0.00748864

>NZ_CP035807.1|WP_149567444.1|1188100_1188928_+|IS3-family-transposase
MVSKDEKLSLSKQCDLLNINRSRIYYTPRTKSKEDLMIMRLIDALYQENPCMGSRRMSKEISKTHGIKLGRLRARRLMREMCISAIYPKKNLSVPDSEHKIYPYLLRNLRIERPNHVWSTDITYIPLSGGFVYLTAVIDWYSRKVLTWKLSNTMDVGFCKSVVVEAIAKYGTPEIFNTDQGSQYTSKEFTDLLKDHEIKISMDGKGRALDNVFVERLWRSVKQEDVYLKDYRDIRDAKRHLTNYFEYYNNRRRHQSLDDEFPEDIYYGKVKLIAA
>NZ_CP035807.1|WP_149567443.1|1187793_1188072_+|transposase
MGRRKKHDSAFKLKVALEAIKEEITVSEIASNYEIHPQQVRQWKREFLQNAESVFQKDDVDKKKVEELETEKEDLQSLIGQQTIEINFLKKT
>NZ_CP035807.1|WP_149567442.1|1187132_1187573_-|hypothetical-protein
MAKYGDFIYNSNTSVLTSYSIGVDCSGFMSQSANYNNNSYDTVKDLPQGMLEWGSWPTSQLMGPSGYDSASYTISEQNRSKLKPGDFIYKPGHVAIILRIEEGTEELDKRIYLLESAFDSGKYKVINLNTIFKYRNYTNFRTKRFK
>NZ_CP035807.1|WP_149567441.1|1186146_1187124_-|hypothetical-protein
MKRIYLIIILLILNQLSAEELELTLAKKFPKGTESFQLGFRPLFYDIYFYSGPSAFTIDSKDNFYIKDTMNSKIKKYDNNWDLTEEYSLSRGDEFIYIKNMYISNDTKYIYSTSSSHISYLNKGKVKYIFRDNTDIDGDVVFIDNKLFYTRRSNPEGLFYYIENGVNKGEFPPKYNLVNFSEDHVEIKLEDNLNIYAVSKSMAPYRKLFKNLKTNSAMDLKDSVFFDDTSYTSSEIIGFDKDLNSFWIIDYHNGKRNIVVLSKWGECLEYFTIPGLWYRHKPTVSLNGDLYFMLYGETETESIDFYSLTKESRINQRKVSENKKK
>NZ_CP035807.1|WP_149567440.1|1185642_1185927_-|hypothetical-protein
MSEEFSNRTAKLPFLDINEKSFDSIYGNKNPYIAIYLNYMIILLIIDIGSLRKVKSKITVIRFYINIGRMYYIKGVTGKLQEKFQESLHLRNSK
>NZ_CP035807.1|WP_149567439.1|1183373_1184771_-|hypothetical-protein
MESNIRPGDDFLLRFGKKNSEVITGVSKDEDFIAVYDKKMLWRANLYIEETNIEDWNDKYKWNAPLTINDTFNKGLSDEEHYNEFGFVKANGDSNDSEIIWYSENKWNHNGDEENVGNGGQVVDILQYNSIFGDTNKLDSVAYNYPESTTTINGRDTPFMFNDKILVQKNRLSEYYNNVGTRFKKAKTEWGNLENVTDRSLFTLEKYNELVEDYTADLNESEPFTDHGISLLSWNETTAFENNWDNYVKEQDQSIDLYLPGLGLIEWSKNPNIQASEEFRESIYSVVNNAEANGTFLAGKEYWSDRAAGVDCIGFAQNAANISGNKWPANNINRAYPRTLEDSQLRDENSTLNYSTFIVGKSNSETNNLGKYKVVGNYNFVKPGDIFYHIGDPDSNNPGGGKHIGIVLSIGRDSLGNIIPSECKIIESNFSDGGSNLSWVRNSQTLNWWVENDRHWRVVRLNKGE
>NZ_CP035807.1|WP_149567438.1|1182813_1183371_-|hypothetical-protein
MKRIVSLIVVILTINTIYCEIAINKVSMETLLEIPYGKSIRQLGKEYDYGGAEHQSITDIVITKDYFIFGDQWNNRFVKASHDLSDFIVLPNIDINTVSGFLEIKNNHLYNYDILSNSVFKYDLETNTMEFHSRSFLDGHTGLSTQKVIYWGSTIFEDLFIGEAKNNSFVVIDTKKKMRNLILYY
>NZ_CP035807.1|WP_149567437.1|1182403_1182775_-|hypothetical-protein
MLKIISEKYLFENDMFITKSPSKFLSFFKKSFSRDEIKSFKELEFEEDAKFSGIDKDGNYYWTSYAGCFVFDKTGKLLTLFVIDFKEARRSDMPRFAIDNDGNAYRLIKGEDCYYLKMVKRYW
>NZ_CP035807.1|WP_149567436.1|1181886_1182138_+|transposase
MNAYAERFIKSIRKECLDWFIIFKEKQLRNIIKEYIHNYNNYRPHQGINGIPNGKYPPENNKGNIKKQSLLFRLHNHHYREAS
>NZ_CP035807.1|WP_149567435.1|1181168_1181645_+|helix-turn-helix-domain-containing-protein
MRYFEQNNIKLPFSKEEKLFIYSFYSKKKNIHKYFTLIKPETILYSWKKAINNIWTYNSTCKRKGRPQISYKIRNLIKSMKVDNYLWGCLRIRDELIKLNIDISRETIRKIISDFRKQNIIKPNYSWSTFLRSHWNSLFACDFFTVDFFVGCIPSSKT
>NZ_CP035807.1|WP_149567446.1|1190456_1191431_-|hypothetical-protein
MKFRFVLVFFIICNYLYGEGFNNYDEQHVFTFSTGSMPGEIGLIEGVESKGNNELFPKLLKKYKDYFILFDTVNSRVNFYNVDFSLEKELEVDFRLLRNSKSKIMDNIIFSSGYNKFVTAFNISTGNITELNFPDSISSKDRVLFTDKVIFNYMNDGSLCSFVLVDEDEMKYSRLLNEEETLELFNEKDKYLLNGYTIDAKRRIFFKNHIQNNDFITLYNYWVELHDANNMTPPRIIPGVPDFEKLSGITSPFIGFDLSRNSYWSSKTGIIIFDSNGWVLDYLKFNNFAYLGPTINEDGDIYYATSEKVNGVTVFNTYKIPRQW
>NZ_CP035807.1|WP_149567447.1|1191420_1194996_-|hypothetical-protein
MSEEFSNRTAKLPFLDINEKSFDSIYGNKNPYIAIYLNYIATEVENGKSSKPVLSYLINKKVNENNTDEIKYNYNQYRQVTEQEGIDIAESALKYMTWALEYTPGVRSEDENNKSDYKVYATNSVEVKEWVNGALLNVSNRSNNYFNGEVKIFNRPSVVEENSPLGKIYDKNLITSPYSNSQGNPIAYSAMGIDTPKTFNYKLYKQNLARRWLMEKYIGDVYTLDNYPAFANGTFSTTMATSSYYDSYVDEIDLYREAGITLKKDAGAGKYETTLPSIDATFYEIEPYLPGVRSETKQLYSADQDSLYHPNKSAGVDSLGLLMGSLSMTDIAGDYLNVFNTKIDEELDANYIQKNPTYHVLDINDQLKKPYRFTKVDLERSTILLPDLSMARPGDILVNYTNNEPMIGVIISADFTGLDSNSTVEDYMKNILVVSINSGFRMANVGVWLSEEGVYGGFTKPGEEKKYHLRRMLVKPTTSGDNISYVNDNFEFFDTELIELDVDMEFKRIINSRTGELRESHWIPNTGEILGIDTIKIKGNYGDDELTNLKEDDKDITILPPFDEFYHEYLGEDKKLKAEVGSNIYQNKGDGLKFYAKQHNEKINRTEFVLLATFKLKNSGLVGKDESPYSVEYSEDIFVSSSVGRTKPDFRLYVEGSTLKFKTKNKTYSQFGVRPINSKIRPGDDFLLRFAKQDNLEVQGVSKDKDFLAVYDKKLLWRANLFIDNDTDKKYGIRTPSSKDWNEQNPWNAPTTINEGLNKGLQTDKYYNEFGFKLASTNSSDNSETIWYAQNEWNRIMESNSQAEKFKMNGTWEDLSDLDEGHGGQVVSFPSAVYNNSRWSDGLVADYMVYNFVRTTSPFLYYNNLLKQLAPLQLRESASLIAMSSAIDEYNKDNSEVNKMVIELLKEDYNKNVGIDVERILPAEPNDPAGKLRPGLLDAKDALLWWSRYDKTAPKPGAWDSLHAKGWNVISGVTKYQNSVFAQPTPENKPLLFYKDGTNKVNTVSGFDNYDVNDSDSWYSNQQAGVDCGGLIYMAEAYTNSKYISNQSKEILADIAARYVHDVGPGSSGYSHSSNNLYEIMNESEYTPDLGLKPSNRKRLIPGDIMFYSNPSYHVAMVQEIDIIEGSREINVDNIYLIESTHHSGIMNSFGIAGLWGVGNRNTLDFYHKVVKSDGSPNHKNWIIGRLKIEI
>NZ_CP035807.1|WP_149567448.1|1195242_1196220_-|hypothetical-protein
MKKIGLFILVILISMDMLVAESKFEIDFVTSYKTGKGINEFATVYNKYLIDGAGDGPSIIYYDESKKVFYISDGYNKRLSVYDFNFKQIDEIDISNDIYLEYPHSIQIYKEGFILYQKYIGFTYHTWDGELQWQMNFVEKYYDNKLENNNFYYDEDNGIILFYMIDGEVICFSSLTKDSNGFVTTKGRDQINILIKNKDISNIKISESNKILVDNKIKSISGNDILDKDNDNGKRIYIGRNKNNYIYWTDADRRIRIYDSSKTFIISEIYREGYITGGSYMPGIHPSGDILYLIYNSHEVALKRIINTWDPKLREQWYKDHPNAK
>NZ_CP035807.1|WP_149567449.1|1196315_1197206_-|IS3-family-transposase
MFAYIKDQSVEESIPVIKMCKSLNVSETGFYKWKRNRNRPKAWQLLLVQMHEILDEHPDNENYGIERMQLALKQKGIIKCSRSTVIRAMRKGNLLHKSRRSPNGLTKSDKKANRPDNVIKRDFTASKPNEKWLTDITEIPCSDGKLYVAPIFDCFGGEIISLAMDSHMRKELCINAVKEAYKLRNPGNGVIIHSDAGSQYTSEKYKNTLGGFKAIQSMSDVGKCYDNSRMESFFATLKKEKVYKINTKKLKREEVKTIVWRYVMTYYNRQRICTVNEGGFPPTVFREMITEKLTAA
>NZ_CP035807.1|WP_149567450.1|1197217_1197493_-|transposase
MTTYSKEFKDQALKLSDEIGLKKASDQLGVKYSTLSGWRRNRSKKSINVVQKDTTPMTDRELKMQKEIQELKQANEILKDALGFFAKDRKK
>NZ_CP035807.1|WP_149567451.1|1197535_1201792_-|hypothetical-protein
MKNIKRILLLITMITLSLSLFGKSGSETAKSDDGKAELAVSAENRYGKIVYKFHNLDQDEAVKYVIVKVGDTLYDQDGNVIYDNVELKQKLTSITTTETKTITINDEESTTSKGTVEVDSALFAEFNSNGDVEVSVDTSLNKVKLTVWTITQSGKVYNIDTNVSPNFFSGEEEFFNSFFGDDSTLTYEQQIIFFLSTFFITENEDAGGNVTGITETAERSNFIDNATALFSDINSSSIPSVSDYITAENFNDKYYELLKHQNKFKAAFASHFILGKESVISKLSEEFSNRTAKLPFLDINEKSFDSIYGNKNPYIAIYLNYIATEVENGKSSKPVLSYLINKKVNENNTDEIKYNYNQYRQVTEQEGIDIAESALKYMTWALEYTPGVRSEDENNKSDYKVYATNSVEVKEWVNGALLNVSNRSNNYFNGEVKIFNRPSVVEENSPLGKIYDKNLITSPYSNSQGNPIAYSAMGIDTPKTFNYKLYKQNLARRWLMEKYIGDVYTLDNYPAFANGTFSTTMATSSYYDSYVDEIDLYREAGITLKKDAGAGKYETALPSIDSTFYEIEPYLPGVRSETEQLYSTDQNSLYHPNKSAGVDSLGLLMGSLTMTNIAGDYLNVFNTKIDEELDANYIQKNPSYHVLDINDQLKKPYRFTKADLERSTILLPDLSMARPGDILVNYTNKEPMIGVIISADFTGLDSNSTVEDYMKKILVVSINSGFRMANVGVWLSEEGVYGGFAKPGEEKKYHLRRMLVKPTTSGDNISYVNDNFEFFDTELIELDVEVDYKSVNGDEINLIPNTGELLIIEKIEIKGNYGDDPEKLKEEDRNVTILPPLDPYNTNMRGTFTNDSEKLAAITADKSNIYRNKGKGYKFYATDGVNHILLATFTLKGNITNHEEGKSPYDIEYNQDIFKNSLGQVKDGFKLAVESNQLKFTVYGETNTLYNQFSIRPINEKVRAGDDLQLRFALQNNYEISGKTKVHDYISLYDKKMIWRANLYINEGKGEADWNNNFPWNAPPVKEDAEEVMGEYKVGEDVKTRFLTSTQVMDTEESIWYGPNEWNRVYDFEKLVNEFHDKQDDFDITNISTDDNKLEQGNGTQSVISINSSTWSINHSAGVNQANKVAYDWIGMDGPFEFNFKTDNQRKLLNYYFKENGDYVAGGTSNLQEVTLTWDSTTAPEELYANYIHSSTKYTLSTLSEADEEGNYPLTLDSIIKSITGEQKTISGKDYYAYLPSLSNNVSDQMGGGAWPKDISAGYTAGTDCIGFVKNSASYLGNKYGEGTHIWGNIIPATWGESRIDTYYPYYDRSSYLIKKKGEKVRIGIDDEGIPILEYDFSDIKVGDLLYYCNKSKEATPTEPAVPASDGTYGGMHVMMIYEIANDGDSINESDIKLIESTDWNTYGYVRKEKTLNDGGLL
>NZ_CP035807.1|WP_149567452.1|1201791_1217109_-|hypothetical-protein
MRDVNNNFFDSENHIASDFSYEGIESFEISNDEFNWTSVPYETVREYKDAGGVTIVDYEVATINKNNISSYDPFWVRATDKAGNTTYSDIIIPRVDTIKPEKPTTTLSTTDVVKGSLDVTIHAEDLGSGVEYIIYDLPYDKLGPITLYSDEESIDSLHSVSRSFTVTENCTVEFKIIDKVGNFRTESVSIDNIDNTPPEIITTYDFDKTVNSNVSILFIATDRSDIDSYSWRYSLNGGNWQSSDGSSNTTTLNLNSLVNGSNKIDIKVKDIFGNEQIVTGKYMLEYDDIEPEITKIELLNSDKEILQSSSQDIIHFNWENSSLTLKTFTNDSSSTVNYKLLDHKYKTKRGEVILDDTVKVSDIRPTFLSILNEENENHYDIYRYQIVAIDSAGNQSIKAKEVTVRIDRKKPVIISSGSLVNSKTISEIVLKSLPLISDYGTLSSSFSANYSNLEYSFDKLTWTALPEDLTVRYSGVDGSQKLYLRYTDGANNISDPTSIEFIKDTKGPEFSSLGQLDNLGYLLDGKLSFKSLPSWDDLDVDIDTLQYRIDDTWLDLTTADGKTQIDVESRPEGFYYIYFRVKDDVGNYGESTEGLEFIVDKTSPVADSFTTYIKEDDLYKTITETGFSSDKDVYLAPTGSDRVLDRDGDVSYYEFYSSRDIDGDFSPIASIFEDGKYKVTLLNGVTYIKSVAIDYGGNRSELSKSLPVIIDSVSPSNLKIKSTSHPEANSERDTVALDDAYFSFSADAGMAGIKQYHYKLYKSEFYSIFSEYISEGTTISKLELVGLEENGYNENTSVFEYYYLGVVAESNNGKLSEEEVYTFRVDLSNPKNIRIDSDTHSIDKKYYSATKAQFSWLEPKDLTGIKKYYYKFVNMETFTQDLDEYIADPNNIDIQGWGETTKREKIFDLQSFVSQGLDKNLECGQVSFILVAEDWTGKKNADYHTVYFDSEKPTIEPITDDDIYLSVDIEDYENFNNLNFTWGVVEDNKSGVERLTFSLYSLDNGSELIFPVTSGKEILAPETNTFSVIGLDKKIKKYRAQLEIFDKAGNKEIKHLFFDSEGIIDTAPAYSIPFDNEYYGYRVVGQTLVDPIAELLLPKALGLKQNSVEITKVNLDFKDKLTEFKNGEYKLIELEDNPLEFMIRGYALKSYGLVLDELGLEIFEPYITLPENRIAQFNNNLLLSSSKSLSSDKPISALYTGYKQFDSSNNWVIKSDEDLEFILSGKNLRISTGYLPKESSNGRGFSIFRNDKSVSLVKILLNSNWKILEGDFVGSPADPFTIETENYSIKVEKAILRENKIIIADGELIVHNQEFVVSGEISNSVRFKDLEISYEGIVTKGKSFSFDNFSYDYNGTNFSVDDIDFTEYGFTTEGSFSVGDYNYRFSGHTFSGESLDEDIAAKLETRLELDYSGYSLTATDIEVVGSQIEINGGILTLTDTYGGETELSDVVKPLIISSLDFSVIDEGIWNIDNEIKVDHSFGSGLTVKSLGLGSNGLDYTIMFREIELALDDYVKGEPFTLHNLLLDRAGNLGDSDVTNSHKVIIEGFNYQASNLQYIGSDFKITVGSLTLDTANPDEKHLNGLKFKGLEFSGNGVIYYGASDTVKQITKDGWNYSLAEFEQRADGLYSKASLSLPEEYGRREITFNDFNYTPGGISNSGITDSKQFINIGDWRVLADSISVDKNIINIESGEIRLFSTMGSQTLLLSSIKLDSNGTIAETISEPSNINFISENGFDVTASSYKLTDNGILLSGQILFPEALQNPEGSVGLNYPDQDVLLNGYGEIITLKEVDEVDYFVGAIPLRGYGISIDSDGLLTDENTLKIVGLNGHELGPIEYYASGEIKFGGEDFTPFSFNPIGDEVTFTVKSIRLTDDGINLSSFVTLPENFAAEYIYFDHLTLHGDGTVTSDTAVPHLEFDAFNTHFNFHDIYLNGEGFSIGEGNITLPDTMENKEVELTNFKINSDGSFELGSSRVDPFDMWGYTFYIDDLGFGELPVNTVDGISFSGGVRLPGDFGVQELAGKRFSIKELEVPYDMDQGELRFNLSLDDSIDFRIFDQWDATITGITVDQDFNLIVNEGTVDLPKEFNSNGSEKPQLKIENITIIPEPTGDEKYFEVKSIKASNLSYRYKDLDFALQELALSEERGLEITEGSVFIPENDPNDPKFPEGLDNTTLSIHTLQIKNDFSVGDLSVSASKTESLPLFDELFYLEPVPTSDSWKLALIKEGDDLFLGASARAVLGYDFPTGIAGKALNIGDKADEFGIKVNVTTGSIERFDVQGDFVDENGNGFIFTMLENTVETKGLGLKYAKETELFELSVTGTSITLDAPNLPNFLKNTVATVETFTIDQNGKVSNFYSTFELEDRRELFAGIYMENWKLGIDMDDDNGLFTFSTLPSGVNSNLIELGSTFPDGIAGTKSSISAFSIDSNGIIGDIDFDVTLSPELKLFGDLNVRGLSNGEYDGSKGANLNFLKSDDGKSFIIDLTAAAKLPEGDALPEGIAGLEIPVHTFKFDATGKILALDMGVSNLNIDIYGELSLEDGTINVLYEPVGTNDLVFDFGGSIVMPTAVKDGLGVDKFNINDLKVSTNSGLISFEAGVEGNITAPLFAGMDFVFNDITVSNSGISLVGQLNLPSSLAEGLPESILLEKFVMDWGGDIIDISAGISNATVTVGGFTTDITNFVVNADRITMDTFRIKLPSQMGGQKVGFNNAGFDYNGTFFGECVLDKIESPNIAGFKIILIEPALDAVNGRVSFDKVYCKTPDFVGGVEIGINGVEVTPSSLNISGGDIALPDFTVGDGMGFKDIKVSFSVNKDSYYVKGGGKLIVPGMGTFGTKVSFTNPSNLYPIGLEQAYFSWEAPGVGIPMASTGMFLNGIRGGLTFGPPIEIPSSLRSMFDNGTRIQLGLTVVDSTGGSQVRGDADIWLDITDWDWAFRGDLVVLNGTARAEVLAAITGRGFYGKLQVTLAVVRGTVQVFVYDQNGQTIVSGTADVDFGIEKGALFHSKRKKLWFVTIPEVNIPSRTEWLAKGYAQFGRFKKGSGWVDGIKGGINIAWFNLNVFANSNGKLDLWGASQYTLYNPFSRSGLSAEKNNNDRIFNIDSRGTSSIANSYNFSIPGENKTKLTRSGVSSESEDVDTLIFLVNYGEGDPELTAIAADGTEYTVADPNVTVDRTEWGMYFIVNKPQAGSWTLRVDNMPSDDSYSVTVFGNQKQPELFVDTFGYTNRYITEPLTVSGSTTGMEEGQTVELFAREDMNEFTGYKIAQTTLDSNGSFSTKIDPSTLVDGENYIYVSVDNGIDANLIEFIGGSLLINNYKEPLAAVDNILLSKTKDGDLVVSFDKLDSVRVAGYSLTLTNKNSGVSKDFYLGQMTKFTIPGLEKDDYIATIKAKDSNGAYGAQSIAKEISLADVTENLNNIRTERDSIILETNVGDSVTDTVDIIVDFPTTTNSSYDFITGEFNSLTPEQYEEGQSWGIYPKLDNSLIDITSGHETLNYTIATNSYTVPGTYSYILTINNMGNLDNKIEIPLTLKVTHPPVMLDSVSPAIWSQGETKNFEIYGSGFVDGTKLLLDGVELPTKDKTFGRLAADVPFDTKQGNRTITVVSPSGEENTIDVEVEGPTWSIATFKGYSVVNPGNSTKLIFSLSGLNDFNSSVPFTVNNLPEGWSSSWYTTNVLADTLEDILIDVPTGTEPGTYFFTIDDIEDNSIRAEIKVTNNTINPTISSLSNYSILTGDELSIFGFGFSETSEVYIGDTKQEVTGRDLDILTIKISNSTLSGDIRVVEGTTTSNTISLHVKERGYKIYPEDDDYRMQPGESKDVNVVISGYSEYVNLEVDNQSEAITAYIADSYLKLNGETTLSITLAHSIPNGTYPISIVGTDGDIRVEKVIEVQVGDAFVFTTQSIPSFMEGVDSSFQLITENGEGETQYTLQEEDDLPAGLTLSKSGLISGKANFGAENKIVVVLAKDETGRVITKEFKITIEENSWSLSGKDGGNSRYNPTPSPADNRVKWNTKTQQMATKILIGNNKVFALGDNGINVLSATSGMPLYTIDGEFSDYFYSSETLFTLDKDNNFTAWEVSLGNKKWSRDGVTNFSTDGFNLLLETEVETLVINLTDGQLTNQLDITLDNTIWFKNQLYRTGKGSLQLLVENSWVEVYDSIADIEKVVTDSNNIVLLSKIGDLTILDENYKQVVTKQIILTDGELVLTDKNILILVDGLTHIYNKTTLDKEITTPTISGTIISAKEKFFVAGDRGLEAKNIYNGKNIWTIQEPQHDAVIVGEELFTIDQAGVVTCYNGRDNIFSPTTTIVSNPATPDGNNDYYRTTPIVELNINDPETFVKEGNYKYNSSIFKNYTEGLNLPDGEYSFSGYGVDSNGLRGLTESRYFKVDTSIPVTTNLITAQEGLNGYTISNVIYNLSATDETSGVEYIHYELNGDKHIYSRAVEITEEGDYTFSWYAEDRAGNLEEIKTDERIIDLNNPTIEYEIYEDDEFSTVYLSATDSYSGVNRIEYRVNGADVQNYLDPINLPAGIMYDITFRSVDNAGRDSGWNAIVLDLSDVEPVDLIKEFKYSWGSGNRYVNRDVQVGDPLYIFKNRGNEKKFGKYNKIESLPDYLIGGEMLVGNYNDKYAWDKKFITITAGTTIDLYVLRNKYSRLELDDTWTLVDSDVDISQYAFVGGADIYHRVVTADNYATITGTAMWQQGGANIVIAKRNLAADLTIFSPNPSKDLTPLSFNWYSASNIKGQINRSWSYKLGDNQEVELGSNFSGEFNLPYVDEDTTLELIVKVEANNPVDPTITDTITTSRFYNVINRGEVKILEPVSGSQVLNNRPTPINYKVINFNNEEIEANINWSVDNGTITNNQLLPNITGLTTITSSFNIYQDYIKESTTTLNIVDNYTTETFDFGQNLVTTYQEQENGRFYGFNKDYRHRVGETTYIDIPEGKYWSNNKITKEYIAFEDGDSFEYLVNNGLYRVKALVGPIVRYDKQSITIEGIKTEIPTERQSRYFYIELTADVVDNKLTITGSQNLQLLELEVTRVEEPIETTITKLENRRVIKDMKWYQWNPDHYFPELDWFNSDKKNKYNHRTNSMRVWSEQVPARPSDRGNR
>NZ_CP035807.1|WP_149567453.1|1217156_1217966_-|hypothetical-protein
MKKFALIQVILLSTLSLSGTIYFKDSYTFKGSYKNDTYPLQSYFSLDTMKDWSWNQNYQFTISETGTYELRSHGGRVFPPSAGNVIVGYYSFTKDNTAPSISSSISPSRLTNGNVTVTASATDSGVGLDKIEMKVGSGSYAIRSSVSLSSNNIVTIKATDKLGNYSTETVSVSNIDKVNPTISISSNNTFPTKDSVNVTATFLDDYSGVNTREVKIGNRSWESIVAPYITTFSSNNKIFFRSMDNAGNWSSISSYEVKILISHLRVVLP
>NZ_CP035807.1|WP_149567402.1|1218401_1218695_+|hypothetical-protein
MKSKYTLEERKQLVIEQQKSGLTITEFTKQKNIKQTTFQNWLRRLKETESEKFVKVKLKSEKPLEPTLLMINSIKLEIPATVSSSKIAQIISVIREI
>NZ_CP035807.1|WP_149567401.1|1218694_1219042_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MILDFTNLSIYVRPGVTDMRKQINGLSVLTEDEMGMDSGSGSLFLFCSRNRKTLKCIYWDRNGFCMWQKKLEKDKFPWPMTEEDAQEITFEQLKLLLDGIDFWKAHKEIKFKEMN

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Crispr_ID: NZ_CP035807_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035807_3

1849620-1850249

TypeII

Consensus_repeat	Method
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	PILER-CR
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CRISPRCasFinder
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CRT

9 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP035807_3

>merge|NZ_CP035807|3|1849620-1850249|PILER-CR,CRISPRCasFinder,CRT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAACAGATCGAATCTCTATACCCAAGAGCTATATGCTTTAGTTCCATCTAAAATGACACACATCTAAAACGCTTCATCATGAGAAATAATGCTATTTAAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACACCTTCTGATTCCCACCGCTCTTGGATTAAGCTTTAGTTCCATCTAAAATGACACACATCTAAAACAAGAGTGCTTAGATCTTTATCTTTATCAAAGCTTTAGTTCCATCTAAAATGACACACATCTAAAACAGATATAAATCAAACGAGACTTAATAATATGCTTTAGTTCCATCTAAAATGACACACATCTAAAACTGTGATCTTAACTCGTTGGCTGTCTCTCAAGCTTTAGTTCCATCTAAAATGACACACATCTAAAACAAGTGGCAGGGTATTGTTAGGAGTATTGACGCTTTAGTTCCATCTAAAATGACACACATCTAAAACAGATAGATTATCTAGTTTATCCCATGATATGCTTTAGTTCCATCTAAAATGACACACATCTAAAACAGATCCAGGGAGATAGAATTTTCTGATGATGCTTTAGTTCCATCTAAAATGACACACATCTAAAAC

>NZ_CP035807|3|1|1849620-1850249|PILER-CR
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATCGAATCTCTATACCCAAGAGCTATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GCTTCATCATGAGAAATAATGCTATTTAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ACCTTCTGATTCCCACCGCTCTTGGATTAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAGAGTGCTTAGATCTTTATCTTTATCAAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATATAAATCAAACGAGACTTAATAATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TGTGATCTTAACTCGTTGGCTGTCTCTCAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAGTGGCAGGGTATTGTTAGGAGTATTGAC
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATAGATTATCTAGTTTATCCCATGATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATCCAGGGAGATAGAATTTTCTGATGAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC

>NZ_CP035807|3|3|1849620-1850249|CRISPRCasFinder
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATCGAATCTCTATACCCAAGAGCTATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GCTTCATCATGAGAAATAATGCTATTTAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ACCTTCTGATTCCCACCGCTCTTGGATTAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAGAGTGCTTAGATCTTTATCTTTATCAAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATATAAATCAAACGAGACTTAATAATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TGTGATCTTAACTCGTTGGCTGTCTCTCAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAGTGGCAGGGTATTGTTAGGAGTATTGAC
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATAGATTATCTAGTTTATCCCATGATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATCCAGGGAGATAGAATTTTCTGATGAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC

>NZ_CP035807|3|1|1849620-1850249|CRT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATCGAATCTCTATACCCAAGAGCTATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GCTTCATCATGAGAAATAATGCTATTTAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ACCTTCTGATTCCCACCGCTCTTGGATTAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAGAGTGCTTAGATCTTTATCTTTATCAAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATATAAATCAAACGAGACTTAATAATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TGTGATCTTAACTCGTTGGCTGTCTCTCAA
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAGTGGCAGGGTATTGTTAGGAGTATTGAC
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATAGATTATCTAGTTTATCCCATGATAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGATCCAGGGAGATAGAATTTTCTGATGAT
GCTTTAGTTCCATCTAAAATGACACACATCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035807.1\|WP_149567969.1\|1853772_1854465_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09644_csn2_CAS-II-A	gnl\|CDD\|213407
NZ_CP035807.1\|WP_149567972.1\|1855650_1859550_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP035807.1\|WP_149567971.1\|1854778_1855651_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP035807.1\|WP_149567962.1\|1842179_1842452_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222864
NZ_CP035807.1\|WP_149567976.1\|1863866_1864970_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381322
NZ_CP035807.1\|WP_149567974.1\|1862880_1863327_-\|chemotaxis-protein-CheX	unknown	unknown	gnl\|CDD\|381734
NZ_CP035807.1\|WP_149567966.1\|1847562_1849287_-\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|200477
NZ_CP035807.1\|WP_149567965.1\|1847013_1847496_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP035807.1\|WP_149567963.1\|1844327_1846124_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP035807.1\|WP_149567975.1\|1863323_1863689_-\|response-regulator	unknown	unknown	gnl\|CDD\|381097
NZ_CP035807.1\|WP_149567967.1\|1850335_1851226_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP035807.1\|WP_149567968.1\|1851237_1851516_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP035807.1\|WP_149567973.1\|1860123_1862877_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP035807.1\|WP_149567961.1\|1841769_1842186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567960.1\|1840679_1841726_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567958.1\|1839970_1840432_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567964.1\|1846394_1846949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567959.1\|1840495_1840708_+\|DUF1456-family-protein	unknown	unknown	gnl\|CDD\|377809
NZ_CP035807.1\|WP_149569597.1\|1842553_1844245_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP035807.1\|WP_149567970.1\|1854461_1854767_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043

Protein	Function_ID	Function_description	E-value
NZ_CP035807.1\|WP_149567969.1\|1853772_1854465_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213407	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.10748e-18
NZ_CP035807.1\|WP_149567972.1\|1855650_1859550_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	8.62302e-143
NZ_CP035807.1\|WP_149567975.1\|1863323_1863689_-\|response-regulator	gnl\|CDD\|381097	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY. The chemotaxis response regulator CheY contains a stand-alone REC domain. Chemotaxis is a behavior known for motile bacteria that directs their movement in response to chemical gradients. CheY is involved in transmitting sensory signals from chemoreceptors to the flagellar motors. Phosphorylated CheY interacts with the flagella switch components FliM and FliY, which causes counterclockwise rotation of the flagella, resulting in smooth swimming. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.71663e-35
NZ_CP035807.1\|WP_149567962.1\|1842179_1842452_-\|hypothetical-protein	gnl\|CDD\|222864	PHA02542, 41, 41 helicase; Provisional.	0.000139802
NZ_CP035807.1\|WP_149567974.1\|1862880_1863327_-\|chemotaxis-protein-CheX	gnl\|CDD\|381734	cd17906, CheX, chemotaxis phosphatase CheX. This family contains CheX CheY-P phosphatase which is very closely related to CheC chemotaxis phosphatase; both dephosphorylate CheY, although CheC requires binding of CheD to achieve the level of activity of CheX. CheX has been shown to be the most powerful CheY-P phosphatase of the CheC-FliY-CheX (CXY) family. Structural and functional data of CheX and its CheY3 substrate in Borrelia burgdorferi (the causative agent of Lyme disease) bound to the phosphoryl analog BeF3(-) and Mg2+ reveal a unique mode of binding, but a catalytic mechanism which is virtually identical to that used by the structurally unrelated CheZ, providing a striking example of convergent evolution. Thus, CheX is quite divergent from the rest of the CXY family; it forms a dimer and some may function outside chemotaxis. The data also suggest a possible CheX regulatory mechanism through dissociation of the CheX homodimer.	2.91181e-26
NZ_CP035807.1\|WP_149567966.1\|1847562_1849287_-\|alpha-glycosidase	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP035807.1\|WP_149567965.1\|1847013_1847496_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	2.79992e-50
NZ_CP035807.1\|WP_149567963.1\|1844327_1846124_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.70595e-149
NZ_CP035807.1\|WP_149567976.1\|1863866_1864970_+\|aldo/keto-reductase	gnl\|CDD\|381322	cd19096, AKR_Fe-S_oxidoreductase, Fe-S oxidoreductase and similar proteins. The family includes a group of uncharacterized Fe-S oxidoreductase that belongs to aldo-keto reductase (AKR) superfamily. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	3.10517e-74
NZ_CP035807.1\|WP_149567967.1\|1850335_1851226_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.83216e-45
NZ_CP035807.1\|WP_149567968.1\|1851237_1851516_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00516435
NZ_CP035807.1\|WP_149567973.1\|1860123_1862877_-\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	1.04484e-142
NZ_CP035807.1\|WP_149567971.1\|1854778_1855651_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	7.79291e-101
NZ_CP035807.1\|WP_149567959.1\|1840495_1840708_+\|DUF1456-family-protein	gnl\|CDD\|377809	pfam07308, DUF1456, Protein of unknown function (DUF1456). This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown.	7.05782e-25
NZ_CP035807.1\|WP_149569597.1\|1842553_1844245_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.77122e-169
NZ_CP035807.1\|WP_149567970.1\|1854461_1854767_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.13588e-24

>NZ_CP035807.1|WP_149567966.1|1847562_1849287_-|alpha-glycosidase
MNIQAIMHKPKSNYCYAYTRDNIHIRIRTAKDDVDRVLLVYGDKYEWEKKITTEMYRAFSDDLYDYYTISITATNNRLSYYFLLENRDESHYFTEWGVNDDIPEDELHLVQFHYPYINVADIHEIPDWVRDTVFYQIFPERYDNGNPDISPKNIVPWDSKPERDSFFGGDLQGIINHLDHIKDLGISGIYMTPIFKSTTNHKYDTTDYYTIDPNFGDKDTLKKLVSECHKRGIKVVLDAVYNHCGYKFDKFQDVVEKGKSSKYYNWFYIEEESEGNSEIKYEKFAFEQKMPKLRTSNPEVQKYLLDVASYWIKETDIDGWRLDVSNEVDHMFWKAFRKEIKSIKPDAYIVGENWHDSQPWLQGDQFDGIMNYPVNYSCLKYFAKSSITTETFKRMINESLMRNTWQVNEAMMNLLDSHDTARFVNLSDMDFRKSLLAMSFLLTFVGSTSIYYGTEIGLTGDGDPDCRKGMNWDKSTWNMTVYNMIQSLLQIRNNNKPLTRGSFSWIDCDLLAYKRSLGNEDIYVYINNNDNCKYCTLTNGTYIDLLKNEEIVVSADKNRVEFSEYSVNILKKKN
>NZ_CP035807.1|WP_149567965.1|1847013_1847496_-|GNAT-family-N-acetyltransferase
MIRNVNIIDSQQICDIYNHYIEHTDITFEEDPVTVVEMSERIKKVTKDMPWIVYEEDGKILGYAYASPWRVRAAYRFCAETSLYVDINLSHRGVGTKLYKQLILELKDLGIHSVLGCLAMPNDKSQGLHEKLGFTKVAHFPEVGFKFGHWIDVGYWQLNL
>NZ_CP035807.1|WP_149567964.1|1846394_1846949_-|hypothetical-protein
MINLFISSLCFSQDFHTFKNGLSMGNVSFSYSQNGGISSLDLFSFRIIESNTGLGLTTYIYPVFMNENVNSTDLFSMELNWEPLFDHSSFWGTGLFLRLDNYLPYGREIDYRTGVRFELRQPFGDFIYPLLGVEAGYWMDRGFYFGAKIDPVVLIGIAAYAFLQESTESYESEYPEDYLPESKK
>NZ_CP035807.1|WP_149567963.1|1844327_1846124_-|ATP-binding-cassette-domain-containing-protein
MKRFKLLFSFLKGSIGIYTLAIILCLMSVGISLLVPLIVRVVIDSVIGSEPFSESGFIAYLFRNRTGVLLKDILTFSFLGVAFVAISSIMEFIYIALIAIASQRAGKKMKDRMYKHIQRLDYEYHAKAEIGDLIQRCTTDIENSMLFLSEHFINILRVIFIMGITISLMLSLNVTMSFISMALVPFIFLYSVNFFKKAQKVFEEQEKTDAILSSVLQENLTGVRVVKAFARQEYEIDKFEIANRNLRERTMDIIKAMSQFWSASDGLSMLQIGVVLGVGSYFVVSGMFGIGMIIAFFTYVERIMWPVKQLGRLLAESGKTSVSLKRLQEILDTNPEVLDDSNYKPQLQGKIEFRNVSFTYPNGTEVLNNVSFVVEKGQSAAIIGPTGSGKTTLVHLLHRLYDNYTGTILVDDMDIRTISKRHLRENLSLILQEPFLFNKSVKDNISYAKEESNDDEIFNATETACIHNSINEFDKGYETLVGEGGVTLSGGQKQRIAIARTLICNNPVVIFDDSLSAVDTETDKVIRTNLKDGDVRPTSIIISHRVSTVRDADKIIVLERGVVTADGTHNEIKDQDNLYRRILNIQSEIEEEFHTKFA
>NZ_CP035807.1|WP_149569597.1|1842553_1844245_-|ATP-binding-cassette-domain-containing-protein
MITMIIITGAVEGSMPFISGWIIDNVVETGNLDMLKIAGGIYTAVIIAQITTVYWFIFHAGKVESGMAYNIRKRGFAKLQRLSLSFYDKNSAGTTLSKLTSDVGRVCGTITWGIIDYTWGTVMMLTMSILMFIRSWQLALVTLAVMPILFGGGFLFQKIIINKYRAVRKINGIITGAYNEGIMGARTVKTLSQEERSHSEFKDKTHDMKQKAIKAGVIGGIFFPFVGFMASVGTALALWAGGVSVANEVITYGMFATFIFSSMQFFYPVYQMSQTFANLQYARAAGERIIDLMDTEEEIVDCTESDIPRKIEGNIEFKNVSFEYVKGERVLKNFSINIKKGESIALVGHTGSGKSTIVNLACRFYEPTEGTILIDGKDYKEISQRDLHSSLGYVLQSPYLFNDTIMENIRFGRLDATEEEIIQACKEINAHEFIMNLEFGYQTKAGESGKLLSTGQKQLISMARAVLADPSIFVLDEATSSVDGESEVKIQKATDRLLEGRTSFIIAHRLSTVVHADRILVVDKGVVIEEGSHNELISLEGHYHKLYTNQFFEEREAELLKEK
>NZ_CP035807.1|WP_149567962.1|1842179_1842452_-|hypothetical-protein
MVKEELNQKSPLRKLEAITEGGVGTGNIGVIASKQGIGKTACLVHIAVDSLLRDKHVIHVSFDKKTDYISAWYEDIFEEISKKEILSLQC
>NZ_CP035807.1|WP_149567961.1|1841769_1842186_-|hypothetical-protein
MLIHDQMIHNRIIMNFHHEYPVIKVLDAVGAMIDNGQNGTDVVIIDGYDFNRGAIKDIDQIKKFAKEKSVEVWFSDTIYPNSLDEDGIPKNLNPFIHDIKTVLTIKPDGNSLKLSFVKHGAISQESHLCLDAKTLLIC
>NZ_CP035807.1|WP_149567960.1|1840679_1841726_+|hypothetical-protein
MELLKMRGIKLLSTLSILFFGLTPLFSQNDYIKEESVNVSSAYYFPNLSGFELDGNFAPITYTPIISELDTQRDLGSTWGAVELKGNYKLTLKRNFLTGASALTKDNSLKHTFSFDISPVTVSLETSTTISPIAFLEFTLGTQLGSGWKAVGADGLALYTNPLGPEEEAFQGVFSKTWLSGTFQFDTAALMGGDTTWKHIVLLSNHNLMLKYFSAAGTDEPWIFQAGDPSYNGFRYEQSTFVGYQMPLVLDMAGILFETGANLFDNATRSTMDSSGWGSDFIDTKIGVLLNFKVGENGAFVLLPQIKKRLRYTDGSVKELYFINRKTDINDPYFWSFDRIAISYTYKL
>NZ_CP035807.1|WP_149567959.1|1840495_1840708_+|DUF1456-family-protein
MDNNEILKKLRIAFSMKDTDVQETLSKADMNLSKTEINALFRKRGQRNFVPCGDQILRRFLDGIIKNERD
>NZ_CP035807.1|WP_149567958.1|1839970_1840432_-|hypothetical-protein
MFSYQLDFKINEGNMNSFLIGTKTLFEKIYQLAKMLGSVIDVEILIEHKLIEIESSKISYQLDIDIKYPIQNALGSNINKHQIDDWISKGFQILLSYNSVDECISSLNSLVEKLKLYNYLLYVKIPEKKLKRSLEDMEKLSILLFNDLVFYEM
>NZ_CP035807.1|WP_149567967.1|1850335_1851226_-|IS3-family-transposase
MFTYIHEFQKELNLPVIRMCNALDVSETGYYKWKRTRNRPKAWQLLLVKIHEIIDEYPDNDNYGIERVMLGLKQRGIKNNSRSTVIRAMRKGNLLHKSRRSPNGLTKADKKANRPENIIKRDFSATKPDEKWLTDITEIPCSDGKLYVAPILDCFGGEIISLSMDSHMKKDLCIDAIKEAYKSRNPGNGVIIHSDAGSQYTSEKYKDTLGRFRAIQSMSDVGKCYDNSRMESFFATLKKEKIYKINTLKLKREEVKKIVWRYVMIYYNRQRINTMNKEGFPPSIYRNMTTDKQAVA
>NZ_CP035807.1|WP_149567968.1|1851237_1851516_-|transposase
MTKYSKEFKEQALGLSDDIGLKKASEQLGLKYSTLAGWRRIRNKKKNNTKDQTYSSPLTVREEEMQREIQELKQANEILKDALGFFAKDRKK
>NZ_CP035807.1|WP_149567969.1|1853772_1854465_-|type-II-A-CRISPR-associated-protein-Csn2
MISFKISNFDELQFNDNLITLEIHNKQLYRNIIESFKAYVASTELKENIIFFENSKSVNWAKKIVICNPESIEYEMKNIQKKLITIISEELYSDIEFLSKLEVNYSTLIEQIEGKIIEHDIDLVINSDFTPDKFLKFVNLNIKLPDSGILSQLYQYVDVVTELNLYEVVVFTNIKLFLDSNELLELFKYIIYKKLNCILLENISNDIIDYETKLVIESDFNDYTENPSTT
>NZ_CP035807.1|WP_149567970.1|1854461_1854767_-|CRISPR-associated-endonuclease-Cas2
MRVLLFFDLPMETPKERYFYNRFRRSLLKEGFIMQQKSVYTKLALNSSSVNLIKSRIKKDLPPNGLVQVLVVTERQFSSVDTFIGEVHYSNLDSTDRLIIL
>NZ_CP035807.1|WP_149567971.1|1854778_1855651_-|type-II-CRISPR-associated-endonuclease-Cas1
MSFRTVLVTSKCKLSYKNEHLYVRSDDLKLIHLSEIEMLIIDSTQVVITTYLLCELVKHKIYIVFCDETHNPQSQLLSLYGSYNTSKKLNKQLNWDVTTKEFVWTSIVTEKIRKQSQLLKANSKEESSILEGYYKGTEQNDPTNREGHAAKVYFNALFGKSFTRDNCSSINKALDYGYSIILSCFNKEVVSNGYFTQLGIWHKSEFNQFNLSSDLMEPFRILIDEYVFRNQDREFNTSYKQDLINILNRTVNINKKEQYVTNAIKIYVKSIFDSLDKNSVNSIKFYETKF
>NZ_CP035807.1|WP_149567972.1|1855650_1859550_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNYSIGLDIGTASVGWSVVDENLNIIRKSGKNLMGVRLFDSGNTAVVRRTHRATRRRIARRKQRIQLLRTLFENEILPIDENFFRRMDNSFLWMEDKKQETKNILFEDETFDDKAYHQKYPTIYHLRKELLESDEKIDIRLLYLAVHHMIKFRGHFIYEEADFNTESGISKSIEKMLESISDFYDENMNLPTVNEVQVILLDKNKKKGDKQKEIVDLFDKQYKKEITEISKAIVGYKANFPKIFMVNDSDIKYNKSFSEELEDSVIMEITGDDYYLFESIEQVYSGFILSEILGDEHNISSAMVQRFNKHKKDKKHLKSLFKITTLKEYYKSIFHSKKAEKVSYTAYINNESSCSNEQLNKSIKAILEKYKVELSDNKDYIYCIEQIEKEDFLKKIRSKENVGIPYQLHKQELEQILVKQSKFYPSLDIEKILSILTFKIPYYVGPLVSEDKSEFAWMERLTEGEILPWNYKDVIDIDKTAEKFIRRMTNKCTYLPKEDVIPKNSILYSEFILLNELNKVRIGGKLLSMDLKRDIIRDVFKKYKNVTIKKIKDYLNNSDIAYSTKQGGVYNYDDEITGTQQENKFASSLTSYIDFEKIFGEGYVEDNPNKVEKIIEWLTIYNSKEIIRKQITKKYPEITKEQIKKILKKSYSGWSRLSARLLDGIKGNNVNHVDLTIINIMRKSNYNFMEIVNDDEFGFNDKINEIRLESNLNSTKVTYKEDIESLPTSPANKKGIWQSVKIVDEIIKIMSKGKDKNKPQRIYIEMARDNQEKKRTTSRRKMLDDLYKKIKNDSYFDYKIINDPEVVKDERIESSRLFLYLTQNGKCMYTGKPLHINQLSNYHIDHIIPQSFIKDDSFNNKVLVIAKANMDKLDQPVNSRMDIPKSVYILWENLEQQGLISKIKHNNLKKTSFSEQDYKGFISRQLVETRQISKHVLNIFKDYKYAKNVVSVKAQLTSSYRKANKLYKIRNLNDLHHAHDAYITCVVGKHIFDRQTKFTWKNYLKESTGSKYGFVIGGLNKNIELSDKVRKVLAYKNVLITKQLKENSGEDKGGFWKSTIHSNTSKGNNKIPLKENLSPEKYGFYTSENRAYCIAIEAKKGKKVFNRIVGVPVNIASSKNLEVALDKFIKDSLDVDEYKILKDKIYLNQLFIQGGSEFYIASEAYLHTATQLFLDNKFTLFIKDITSNKSIDKVNDSLFEEFYDYYIKKLETHYYKYSTISEKMTLNRDLFINLSKEEKTQIILKLLDVTKSGSSQIDLKKIGCSVGTGIIASFALNRDEMTFIDQSITGFYEKRYKL
>NZ_CP035807.1|WP_149567973.1|1860123_1862877_-|ammonium-transporter
METNLLDILWIIVASCLVFIMQAGFAMVESGLTRSKNSINVSIKNLTDLGVSTLFFWAIGFGLMFGKTKLGFIGRDNFLFSAKNTWVAAFFLFQAMFCSTSATIVSGAIAERVKYGAYIIATIFLSAIIYPIFGHWVWGGLINGNGSGWLSRLGFIDFAGSTVVHSLGGWVALAFLLIIGERTGRYDNNGIPVPINGNNIPMVVLGVLILWFGWFGFNGGSTLVMDSTVAGIILKTTLSASAGMVASLAFGWPILKKPDVTLVMNGALAGLVAITAPVHSVTEIQAIVIGLVGGVVMFLSTMVLDKLKIDDAVGAIPVHLSSGIWGTLAVGIFGNLDILNTGLNRGGQIIIQLVGIITCGVWAFGISFVFLFLLNKIYPLRIGLKEEIDGLNKSEHGTSTEIFDLYTVLHHQASTGDISLRAPVEPFTEVGQIAGIYNEVLDKLEENTVEKGDYLNILENVSDGIFLLSQNGGIGKYYSKSLELILEEKSLADFSFITFIEKILLEVDKNLFKDFLDVAFNPATQWRHVERLNPLREVDAYFDNNQGSFRTKHLVFNFKRVEKKGEIINLLVMVSDVSEEFELNKEIEHTRKKSHIEMELLYKILHVEPTVLREFFKFSNKDLIEINSIFQKGSDSSRDKLEKAFRLSHGIKGDAELLELNFISEKAEELELSMQKILKSSEIDTEDFIPLTLKFSELQNTFNKIQELLSKWAGFQANGGSIHNTDNYLKEHLVKMCSRLSTKYDKAVQLKLDGFSIEKFSEEQFKPIQNIIIQLMRNAIYHGIESSEKRVALGKKAIGLIYIKVEESEDTLHLVFSDDGEGLNLQNIRKKAYDERIITKEQFDKLSDNIIPRLIFKQGLSTAKKADVVAGKGVGMPLVNNLIRDLDGSITIRSRADVGCQFVIKIPKILNREVVTV
>NZ_CP035807.1|WP_149567974.1|1862880_1863327_-|chemotaxis-protein-CheX
MKESELKAFIKIVTEYFESITGIAAKMGLPFIKDESTGVFDFTGIIGVSGARKGGVYFTAPKELLYEFGGYLLEGDKVEDDDLYDLIGEMTNTISGNMREFFGTTFLISVPIVLKGQVENIDMRLNPPVFIIPIEWQYNDCHLAIGLE
>NZ_CP035807.1|WP_149567975.1|1863323_1863689_-|response-regulator
MKLLIVDDSNIMRRAINKYLKEFKLEIVGSACNGEEAVEICKSKKPDLVTLDITMPKMDGLTCLTEILKIAPETKILVISALSDYGTGLLALKKGAMGFLPKPFTASELQEEIKFICGIMV
>NZ_CP035807.1|WP_149567976.1|1863866_1864970_+|aldo/keto-reductase
MLYKMYGKTGKRVSAVGFGGMRFDETKTIEENAEIVRYASSKGINYFDTAPGYCSDTSEDIFGEAFKNMPNPFYVSTKGMPTTYDTAEKAIDAVKKSIKRMGLKKIDFYHIWCIRKSEHYELAMKPGGQYEGLLQCQKEGLIDHIVLSSHQNGNEVKEILIDKKIDGILLGVNILNFPYRWEAVETAYNMGYGVVAMNPLSGGAIPTHEKELQFLTNGKETATEAALRFVISCPQITIALNGFTTKEHIDTACKIANESKPFEQDEIKRIENLVGESMNEACTGCGYCDKCPQGIAIPSFLQYYNEKHVFHKSDKEMKENIVGAYEWGILAGKKGTAADCTSCGLCEDECTQHLPIIDRLKEITSWT

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Crispr_ID: NZ_CP035807_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP035807_4

1851587-1853734

TypeII

Consensus_repeat	Method
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CRISPRCasFinder
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CRT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	PILER-CR

32 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP035807_4

>merge|NZ_CP035807|4|1851587-1853734|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGTTCCATCTAAAATGACACACATCTAAAACGTGTTGAATTAGTAGCTGAGGAAGAGTTAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCCAGTAATCTTGTAATATACCCAATCTTCTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCACTAACAGTAGTGACATGATGGATAATACGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTCAAATGATCCTACTATGAGAAACATCTTCGTTTTAGTTCCATCTAAAATGACACACATCTAAAACATGTAAAATGTTGGCATTACTTTAAAAATTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCTAGGGGTTCTGCAATATATGGGGAAGATAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTCCGGAAGCAACCAGGATGGTTACTAAAGTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACATTTATAATCTTTAGTAGTAGCCCTCTGGTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACGGGAATACATAAGTGGTTCCTATTTCAATAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTCATCAACATTCTCATATTCAGGTAATTTTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCACCAATTACTGATAACCTCTCTTGAAAGGGTTTTAGTTCCATCTAAAATGACACACATCTAAAACAATGGGTACTTAATAATCATGGATTGGCAGGTTTTAGTTCCATCTAAAATGACACACATCTAAAACGTCTTTTGTTGTATCGGGCAATCTGAGCTTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACGTAGTTTAGCATTACTAGTTTTATTATTAGGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTTCTCACCCGATTCATCAAGAACATCTGTTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACATTCCATTGCAATTTTAACTTTAGGCGTTAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCTGGCTCTGTTAACTCTTCAAATGTATAAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCGTGTTGCTAATCTGTTCTTGTTCGCCTGAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACAACAGTAACAGGCAATAGATGGTTCAATATGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTTGAATCGGTATAAGTTCTATGTAACAACTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACGAAACGAAGGTTTTGATTACTTCTGGAAAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTAGGTATTTAGTCAAATTATAGTTTGTATGGTTTTAGTTCCATCTAAAATGACACACATCTAAAACGGTGGTATCATGTGGGGCATGTTCACTCTTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACAGAAAAGACACAACATACAAAGGCAAGAGAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACAAAGTCCAACCTCTGCCACAAAGTTATCCCGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCTTAGATGATTTGTTAGAAAACGGTTTTATGTTTTAGTTCCATCTAAAATGACACACATCTAAAACAGCATCCGTGATAGAATAATTATTAATAGTGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCTAGTAAACACATAATAGATAGCGAAAGAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACATCTCAACATGGATTCCTTTTATATCAAAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACCGTCCGTCTTCTTTAAATTCTGTCATTAAAGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTCTATGAAGTTCGCCCTGGAGGGGCACAACGTTTTAGTTCCATCTAAAATGACACACATCTAAAACTAATCATCGTAAGAACCTGTAACTTTATATGTTTTAGTTCCATCTAAAATGACACACATCTAAAAC

>NZ_CP035807|4|4|1851587-1853734|CRISPRCasFinder
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTGTTGAATTAGTAGCTGAGGAAGAGTTAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CCAGTAATCTTGTAATATACCCAATCTTCT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CACTAACAGTAGTGACATGATGGATAATAC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCAAATGATCCTACTATGAGAAACATCTTC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATGTAAAATGTTGGCATTACTTTAAAAATT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTAGGGGTTCTGCAATATATGGGGAAGATA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCCGGAAGCAACCAGGATGGTTACTAAAGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATTTATAATCTTTAGTAGTAGCCCTCTGGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GGGAATACATAAGTGGTTCCTATTTCAATA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCATCAACATTCTCATATTCAGGTAATTTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CACCAATTACTGATAACCTCTCTTGAAAGG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AATGGGTACTTAATAATCATGGATTGGCAG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTCTTTTGTTGTATCGGGCAATCTGAGCTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTAGTTTAGCATTACTAGTTTTATTATTAG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TTCTCACCCGATTCATCAAGAACATCTGTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATTCCATTGCAATTTTAACTTTAGGCGTTA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTGGCTCTGTTAACTCTTCAAATGTATAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CGTGTTGCTAATCTGTTCTTGTTCGCCTGA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AACAGTAACAGGCAATAGATGGTTCAATAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TTGAATCGGTATAAGTTCTATGTAACAACT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GAAACGAAGGTTTTGATTACTTCTGGAAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TAGGTATTTAGTCAAATTATAGTTTGTATG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GGTGGTATCATGTGGGGCATGTTCACTCTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGAAAAGACACAACATACAAAGGCAAGAGA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAAGTCCAACCTCTGCCACAAAGTTATCCC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTTAGATGATTTGTTAGAAAACGGTTTTAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGCATCCGTGATAGAATAATTATTAATAGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTAGTAAACACATAATAGATAGCGAAAGAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATCTCAACATGGATTCCTTTTATATCAAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CGTCCGTCTTCTTTAAATTCTGTCATTAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCTATGAAGTTCGCCCTGGAGGGGCACAAC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TAATCATCGTAAGAACCTGTAACTTTATAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC

>NZ_CP035807|4|2|1851587-1853734|CRT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTGTTGAATTAGTAGCTGAGGAAGAGTTAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CCAGTAATCTTGTAATATACCCAATCTTCT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CACTAACAGTAGTGACATGATGGATAATAC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCAAATGATCCTACTATGAGAAACATCTTC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATGTAAAATGTTGGCATTACTTTAAAAATT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTAGGGGTTCTGCAATATATGGGGAAGATA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCCGGAAGCAACCAGGATGGTTACTAAAGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATTTATAATCTTTAGTAGTAGCCCTCTGGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GGGAATACATAAGTGGTTCCTATTTCAATA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCATCAACATTCTCATATTCAGGTAATTTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CACCAATTACTGATAACCTCTCTTGAAAGG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AATGGGTACTTAATAATCATGGATTGGCAG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTCTTTTGTTGTATCGGGCAATCTGAGCTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTAGTTTAGCATTACTAGTTTTATTATTAG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TTCTCACCCGATTCATCAAGAACATCTGTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATTCCATTGCAATTTTAACTTTAGGCGTTA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTGGCTCTGTTAACTCTTCAAATGTATAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CGTGTTGCTAATCTGTTCTTGTTCGCCTGA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AACAGTAACAGGCAATAGATGGTTCAATAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TTGAATCGGTATAAGTTCTATGTAACAACT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GAAACGAAGGTTTTGATTACTTCTGGAAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TAGGTATTTAGTCAAATTATAGTTTGTATG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GGTGGTATCATGTGGGGCATGTTCACTCTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGAAAAGACACAACATACAAAGGCAAGAGA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAAGTCCAACCTCTGCCACAAAGTTATCCC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTTAGATGATTTGTTAGAAAACGGTTTTAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGCATCCGTGATAGAATAATTATTAATAGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTAGTAAACACATAATAGATAGCGAAAGAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATCTCAACATGGATTCCTTTTATATCAAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CGTCCGTCTTCTTTAAATTCTGTCATTAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCTATGAAGTTCGCCCTGGAGGGGCACAAC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TAATCATCGTAAGAACCTGTAACTTTATAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC

>NZ_CP035807|4|2|1852049-1853734|PILER-CR
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATTTATAATCTTTAGTAGTAGCCCTCTGGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GGGAATACATAAGTGGTTCCTATTTCAATA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCATCAACATTCTCATATTCAGGTAATTTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CACCAATTACTGATAACCTCTCTTGAAAGG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AATGGGTACTTAATAATCATGGATTGGCAG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTCTTTTGTTGTATCGGGCAATCTGAGCTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GTAGTTTAGCATTACTAGTTTTATTATTAG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TTCTCACCCGATTCATCAAGAACATCTGTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATTCCATTGCAATTTTAACTTTAGGCGTTA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTGGCTCTGTTAACTCTTCAAATGTATAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CGTGTTGCTAATCTGTTCTTGTTCGCCTGA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AACAGTAACAGGCAATAGATGGTTCAATAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TTGAATCGGTATAAGTTCTATGTAACAACT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GAAACGAAGGTTTTGATTACTTCTGGAAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TAGGTATTTAGTCAAATTATAGTTTGTATG
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	GGTGGTATCATGTGGGGCATGTTCACTCTT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGAAAAGACACAACATACAAAGGCAAGAGA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AAAGTCCAACCTCTGCCACAAAGTTATCCC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTTAGATGATTTGTTAGAAAACGGTTTTAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	AGCATCCGTGATAGAATAATTATTAATAGT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CTAGTAAACACATAATAGATAGCGAAAGAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	ATCTCAACATGGATTCCTTTTATATCAAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	CGTCCGTCTTCTTTAAATTCTGTCATTAAA
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TCTATGAAGTTCGCCCTGGAGGGGCACAAC
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC	TAATCATCGTAAGAACCTGTAACTTTATAT
GTTTTAGTTCCATCTAAAATGACACACATCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP035807.1\|WP_149567969.1\|1853772_1854465_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09644_csn2_CAS-II-A	gnl\|CDD\|213407
NZ_CP035807.1\|WP_149567972.1\|1855650_1859550_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP035807.1\|WP_149567975.1\|1863323_1863689_-\|response-regulator	unknown	unknown	gnl\|CDD\|381097
NZ_CP035807.1\|WP_149567962.1\|1842179_1842452_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222864
NZ_CP035807.1\|WP_149567974.1\|1862880_1863327_-\|chemotaxis-protein-CheX	unknown	unknown	gnl\|CDD\|381734
NZ_CP035807.1\|WP_149567966.1\|1847562_1849287_-\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|200477
NZ_CP035807.1\|WP_149567965.1\|1847013_1847496_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP035807.1\|WP_149567963.1\|1844327_1846124_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP035807.1\|WP_149567976.1\|1863866_1864970_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381322
NZ_CP035807.1\|WP_149569597.1\|1842553_1844245_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP035807.1\|WP_149567968.1\|1851237_1851516_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP035807.1\|WP_149567973.1\|1860123_1862877_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP035807.1\|WP_149567961.1\|1841769_1842186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567960.1\|1840679_1841726_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567964.1\|1846394_1846949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP035807.1\|WP_149567971.1\|1854778_1855651_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP035807.1\|WP_149567967.1\|1850335_1851226_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP035807.1\|WP_149567970.1\|1854461_1854767_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP035807.1\|WP_149567977.1\|1865077_1866913_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP035807.1\|WP_149567978.1\|1866899_1867439_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372273

Protein	Function_ID	Function_description	E-value
NZ_CP035807.1\|WP_149567969.1\|1853772_1854465_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213407	cd09644, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.10748e-18
NZ_CP035807.1\|WP_149567972.1\|1855650_1859550_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	8.62302e-143
NZ_CP035807.1\|WP_149567975.1\|1863323_1863689_-\|response-regulator	gnl\|CDD\|381097	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY. The chemotaxis response regulator CheY contains a stand-alone REC domain. Chemotaxis is a behavior known for motile bacteria that directs their movement in response to chemical gradients. CheY is involved in transmitting sensory signals from chemoreceptors to the flagellar motors. Phosphorylated CheY interacts with the flagella switch components FliM and FliY, which causes counterclockwise rotation of the flagella, resulting in smooth swimming. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.71663e-35
NZ_CP035807.1\|WP_149567962.1\|1842179_1842452_-\|hypothetical-protein	gnl\|CDD\|222864	PHA02542, 41, 41 helicase; Provisional.	0.000139802
NZ_CP035807.1\|WP_149567974.1\|1862880_1863327_-\|chemotaxis-protein-CheX	gnl\|CDD\|381734	cd17906, CheX, chemotaxis phosphatase CheX. This family contains CheX CheY-P phosphatase which is very closely related to CheC chemotaxis phosphatase; both dephosphorylate CheY, although CheC requires binding of CheD to achieve the level of activity of CheX. CheX has been shown to be the most powerful CheY-P phosphatase of the CheC-FliY-CheX (CXY) family. Structural and functional data of CheX and its CheY3 substrate in Borrelia burgdorferi (the causative agent of Lyme disease) bound to the phosphoryl analog BeF3(-) and Mg2+ reveal a unique mode of binding, but a catalytic mechanism which is virtually identical to that used by the structurally unrelated CheZ, providing a striking example of convergent evolution. Thus, CheX is quite divergent from the rest of the CXY family; it forms a dimer and some may function outside chemotaxis. The data also suggest a possible CheX regulatory mechanism through dissociation of the CheX homodimer.	2.91181e-26
NZ_CP035807.1\|WP_149567966.1\|1847562_1849287_-\|alpha-glycosidase	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP035807.1\|WP_149567965.1\|1847013_1847496_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	2.79992e-50
NZ_CP035807.1\|WP_149567963.1\|1844327_1846124_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.70595e-149
NZ_CP035807.1\|WP_149567976.1\|1863866_1864970_+\|aldo/keto-reductase	gnl\|CDD\|381322	cd19096, AKR_Fe-S_oxidoreductase, Fe-S oxidoreductase and similar proteins. The family includes a group of uncharacterized Fe-S oxidoreductase that belongs to aldo-keto reductase (AKR) superfamily. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	3.10517e-74
NZ_CP035807.1\|WP_149569597.1\|1842553_1844245_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.77122e-169
NZ_CP035807.1\|WP_149567968.1\|1851237_1851516_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00516435
NZ_CP035807.1\|WP_149567973.1\|1860123_1862877_-\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	1.04484e-142
NZ_CP035807.1\|WP_149567977.1\|1865077_1866913_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.44236e-36
NZ_CP035807.1\|WP_149567971.1\|1854778_1855651_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	7.79291e-101
NZ_CP035807.1\|WP_149567967.1\|1850335_1851226_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.83216e-45
NZ_CP035807.1\|WP_149567970.1\|1854461_1854767_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.13588e-24
NZ_CP035807.1\|WP_149567978.1\|1866899_1867439_-\|hypothetical-protein	gnl\|CDD\|372273	pfam12724, Flavodoxin_5, Flavodoxin domain. This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.	2.30533e-07

>NZ_CP035807.1|WP_149567968.1|1851237_1851516_-|transposase
MTKYSKEFKEQALGLSDDIGLKKASEQLGLKYSTLAGWRRIRNKKKNNTKDQTYSSPLTVREEEMQREIQELKQANEILKDALGFFAKDRKK
>NZ_CP035807.1|WP_149567967.1|1850335_1851226_-|IS3-family-transposase
MFTYIHEFQKELNLPVIRMCNALDVSETGYYKWKRTRNRPKAWQLLLVKIHEIIDEYPDNDNYGIERVMLGLKQRGIKNNSRSTVIRAMRKGNLLHKSRRSPNGLTKADKKANRPENIIKRDFSATKPDEKWLTDITEIPCSDGKLYVAPILDCFGGEIISLSMDSHMKKDLCIDAIKEAYKSRNPGNGVIIHSDAGSQYTSEKYKDTLGRFRAIQSMSDVGKCYDNSRMESFFATLKKEKIYKINTLKLKREEVKKIVWRYVMIYYNRQRINTMNKEGFPPSIYRNMTTDKQAVA
>NZ_CP035807.1|WP_149567966.1|1847562_1849287_-|alpha-glycosidase
MNIQAIMHKPKSNYCYAYTRDNIHIRIRTAKDDVDRVLLVYGDKYEWEKKITTEMYRAFSDDLYDYYTISITATNNRLSYYFLLENRDESHYFTEWGVNDDIPEDELHLVQFHYPYINVADIHEIPDWVRDTVFYQIFPERYDNGNPDISPKNIVPWDSKPERDSFFGGDLQGIINHLDHIKDLGISGIYMTPIFKSTTNHKYDTTDYYTIDPNFGDKDTLKKLVSECHKRGIKVVLDAVYNHCGYKFDKFQDVVEKGKSSKYYNWFYIEEESEGNSEIKYEKFAFEQKMPKLRTSNPEVQKYLLDVASYWIKETDIDGWRLDVSNEVDHMFWKAFRKEIKSIKPDAYIVGENWHDSQPWLQGDQFDGIMNYPVNYSCLKYFAKSSITTETFKRMINESLMRNTWQVNEAMMNLLDSHDTARFVNLSDMDFRKSLLAMSFLLTFVGSTSIYYGTEIGLTGDGDPDCRKGMNWDKSTWNMTVYNMIQSLLQIRNNNKPLTRGSFSWIDCDLLAYKRSLGNEDIYVYINNNDNCKYCTLTNGTYIDLLKNEEIVVSADKNRVEFSEYSVNILKKKN
>NZ_CP035807.1|WP_149567965.1|1847013_1847496_-|GNAT-family-N-acetyltransferase
MIRNVNIIDSQQICDIYNHYIEHTDITFEEDPVTVVEMSERIKKVTKDMPWIVYEEDGKILGYAYASPWRVRAAYRFCAETSLYVDINLSHRGVGTKLYKQLILELKDLGIHSVLGCLAMPNDKSQGLHEKLGFTKVAHFPEVGFKFGHWIDVGYWQLNL
>NZ_CP035807.1|WP_149567964.1|1846394_1846949_-|hypothetical-protein
MINLFISSLCFSQDFHTFKNGLSMGNVSFSYSQNGGISSLDLFSFRIIESNTGLGLTTYIYPVFMNENVNSTDLFSMELNWEPLFDHSSFWGTGLFLRLDNYLPYGREIDYRTGVRFELRQPFGDFIYPLLGVEAGYWMDRGFYFGAKIDPVVLIGIAAYAFLQESTESYESEYPEDYLPESKK
>NZ_CP035807.1|WP_149567963.1|1844327_1846124_-|ATP-binding-cassette-domain-containing-protein
MKRFKLLFSFLKGSIGIYTLAIILCLMSVGISLLVPLIVRVVIDSVIGSEPFSESGFIAYLFRNRTGVLLKDILTFSFLGVAFVAISSIMEFIYIALIAIASQRAGKKMKDRMYKHIQRLDYEYHAKAEIGDLIQRCTTDIENSMLFLSEHFINILRVIFIMGITISLMLSLNVTMSFISMALVPFIFLYSVNFFKKAQKVFEEQEKTDAILSSVLQENLTGVRVVKAFARQEYEIDKFEIANRNLRERTMDIIKAMSQFWSASDGLSMLQIGVVLGVGSYFVVSGMFGIGMIIAFFTYVERIMWPVKQLGRLLAESGKTSVSLKRLQEILDTNPEVLDDSNYKPQLQGKIEFRNVSFTYPNGTEVLNNVSFVVEKGQSAAIIGPTGSGKTTLVHLLHRLYDNYTGTILVDDMDIRTISKRHLRENLSLILQEPFLFNKSVKDNISYAKEESNDDEIFNATETACIHNSINEFDKGYETLVGEGGVTLSGGQKQRIAIARTLICNNPVVIFDDSLSAVDTETDKVIRTNLKDGDVRPTSIIISHRVSTVRDADKIIVLERGVVTADGTHNEIKDQDNLYRRILNIQSEIEEEFHTKFA
>NZ_CP035807.1|WP_149569597.1|1842553_1844245_-|ATP-binding-cassette-domain-containing-protein
MITMIIITGAVEGSMPFISGWIIDNVVETGNLDMLKIAGGIYTAVIIAQITTVYWFIFHAGKVESGMAYNIRKRGFAKLQRLSLSFYDKNSAGTTLSKLTSDVGRVCGTITWGIIDYTWGTVMMLTMSILMFIRSWQLALVTLAVMPILFGGGFLFQKIIINKYRAVRKINGIITGAYNEGIMGARTVKTLSQEERSHSEFKDKTHDMKQKAIKAGVIGGIFFPFVGFMASVGTALALWAGGVSVANEVITYGMFATFIFSSMQFFYPVYQMSQTFANLQYARAAGERIIDLMDTEEEIVDCTESDIPRKIEGNIEFKNVSFEYVKGERVLKNFSINIKKGESIALVGHTGSGKSTIVNLACRFYEPTEGTILIDGKDYKEISQRDLHSSLGYVLQSPYLFNDTIMENIRFGRLDATEEEIIQACKEINAHEFIMNLEFGYQTKAGESGKLLSTGQKQLISMARAVLADPSIFVLDEATSSVDGESEVKIQKATDRLLEGRTSFIIAHRLSTVVHADRILVVDKGVVIEEGSHNELISLEGHYHKLYTNQFFEEREAELLKEK
>NZ_CP035807.1|WP_149567962.1|1842179_1842452_-|hypothetical-protein
MVKEELNQKSPLRKLEAITEGGVGTGNIGVIASKQGIGKTACLVHIAVDSLLRDKHVIHVSFDKKTDYISAWYEDIFEEISKKEILSLQC
>NZ_CP035807.1|WP_149567961.1|1841769_1842186_-|hypothetical-protein
MLIHDQMIHNRIIMNFHHEYPVIKVLDAVGAMIDNGQNGTDVVIIDGYDFNRGAIKDIDQIKKFAKEKSVEVWFSDTIYPNSLDEDGIPKNLNPFIHDIKTVLTIKPDGNSLKLSFVKHGAISQESHLCLDAKTLLIC
>NZ_CP035807.1|WP_149567960.1|1840679_1841726_+|hypothetical-protein
MELLKMRGIKLLSTLSILFFGLTPLFSQNDYIKEESVNVSSAYYFPNLSGFELDGNFAPITYTPIISELDTQRDLGSTWGAVELKGNYKLTLKRNFLTGASALTKDNSLKHTFSFDISPVTVSLETSTTISPIAFLEFTLGTQLGSGWKAVGADGLALYTNPLGPEEEAFQGVFSKTWLSGTFQFDTAALMGGDTTWKHIVLLSNHNLMLKYFSAAGTDEPWIFQAGDPSYNGFRYEQSTFVGYQMPLVLDMAGILFETGANLFDNATRSTMDSSGWGSDFIDTKIGVLLNFKVGENGAFVLLPQIKKRLRYTDGSVKELYFINRKTDINDPYFWSFDRIAISYTYKL
>NZ_CP035807.1|WP_149567969.1|1853772_1854465_-|type-II-A-CRISPR-associated-protein-Csn2
MISFKISNFDELQFNDNLITLEIHNKQLYRNIIESFKAYVASTELKENIIFFENSKSVNWAKKIVICNPESIEYEMKNIQKKLITIISEELYSDIEFLSKLEVNYSTLIEQIEGKIIEHDIDLVINSDFTPDKFLKFVNLNIKLPDSGILSQLYQYVDVVTELNLYEVVVFTNIKLFLDSNELLELFKYIIYKKLNCILLENISNDIIDYETKLVIESDFNDYTENPSTT
>NZ_CP035807.1|WP_149567970.1|1854461_1854767_-|CRISPR-associated-endonuclease-Cas2
MRVLLFFDLPMETPKERYFYNRFRRSLLKEGFIMQQKSVYTKLALNSSSVNLIKSRIKKDLPPNGLVQVLVVTERQFSSVDTFIGEVHYSNLDSTDRLIIL
>NZ_CP035807.1|WP_149567971.1|1854778_1855651_-|type-II-CRISPR-associated-endonuclease-Cas1
MSFRTVLVTSKCKLSYKNEHLYVRSDDLKLIHLSEIEMLIIDSTQVVITTYLLCELVKHKIYIVFCDETHNPQSQLLSLYGSYNTSKKLNKQLNWDVTTKEFVWTSIVTEKIRKQSQLLKANSKEESSILEGYYKGTEQNDPTNREGHAAKVYFNALFGKSFTRDNCSSINKALDYGYSIILSCFNKEVVSNGYFTQLGIWHKSEFNQFNLSSDLMEPFRILIDEYVFRNQDREFNTSYKQDLINILNRTVNINKKEQYVTNAIKIYVKSIFDSLDKNSVNSIKFYETKF
>NZ_CP035807.1|WP_149567972.1|1855650_1859550_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKNYSIGLDIGTASVGWSVVDENLNIIRKSGKNLMGVRLFDSGNTAVVRRTHRATRRRIARRKQRIQLLRTLFENEILPIDENFFRRMDNSFLWMEDKKQETKNILFEDETFDDKAYHQKYPTIYHLRKELLESDEKIDIRLLYLAVHHMIKFRGHFIYEEADFNTESGISKSIEKMLESISDFYDENMNLPTVNEVQVILLDKNKKKGDKQKEIVDLFDKQYKKEITEISKAIVGYKANFPKIFMVNDSDIKYNKSFSEELEDSVIMEITGDDYYLFESIEQVYSGFILSEILGDEHNISSAMVQRFNKHKKDKKHLKSLFKITTLKEYYKSIFHSKKAEKVSYTAYINNESSCSNEQLNKSIKAILEKYKVELSDNKDYIYCIEQIEKEDFLKKIRSKENVGIPYQLHKQELEQILVKQSKFYPSLDIEKILSILTFKIPYYVGPLVSEDKSEFAWMERLTEGEILPWNYKDVIDIDKTAEKFIRRMTNKCTYLPKEDVIPKNSILYSEFILLNELNKVRIGGKLLSMDLKRDIIRDVFKKYKNVTIKKIKDYLNNSDIAYSTKQGGVYNYDDEITGTQQENKFASSLTSYIDFEKIFGEGYVEDNPNKVEKIIEWLTIYNSKEIIRKQITKKYPEITKEQIKKILKKSYSGWSRLSARLLDGIKGNNVNHVDLTIINIMRKSNYNFMEIVNDDEFGFNDKINEIRLESNLNSTKVTYKEDIESLPTSPANKKGIWQSVKIVDEIIKIMSKGKDKNKPQRIYIEMARDNQEKKRTTSRRKMLDDLYKKIKNDSYFDYKIINDPEVVKDERIESSRLFLYLTQNGKCMYTGKPLHINQLSNYHIDHIIPQSFIKDDSFNNKVLVIAKANMDKLDQPVNSRMDIPKSVYILWENLEQQGLISKIKHNNLKKTSFSEQDYKGFISRQLVETRQISKHVLNIFKDYKYAKNVVSVKAQLTSSYRKANKLYKIRNLNDLHHAHDAYITCVVGKHIFDRQTKFTWKNYLKESTGSKYGFVIGGLNKNIELSDKVRKVLAYKNVLITKQLKENSGEDKGGFWKSTIHSNTSKGNNKIPLKENLSPEKYGFYTSENRAYCIAIEAKKGKKVFNRIVGVPVNIASSKNLEVALDKFIKDSLDVDEYKILKDKIYLNQLFIQGGSEFYIASEAYLHTATQLFLDNKFTLFIKDITSNKSIDKVNDSLFEEFYDYYIKKLETHYYKYSTISEKMTLNRDLFINLSKEEKTQIILKLLDVTKSGSSQIDLKKIGCSVGTGIIASFALNRDEMTFIDQSITGFYEKRYKL
>NZ_CP035807.1|WP_149567973.1|1860123_1862877_-|ammonium-transporter
METNLLDILWIIVASCLVFIMQAGFAMVESGLTRSKNSINVSIKNLTDLGVSTLFFWAIGFGLMFGKTKLGFIGRDNFLFSAKNTWVAAFFLFQAMFCSTSATIVSGAIAERVKYGAYIIATIFLSAIIYPIFGHWVWGGLINGNGSGWLSRLGFIDFAGSTVVHSLGGWVALAFLLIIGERTGRYDNNGIPVPINGNNIPMVVLGVLILWFGWFGFNGGSTLVMDSTVAGIILKTTLSASAGMVASLAFGWPILKKPDVTLVMNGALAGLVAITAPVHSVTEIQAIVIGLVGGVVMFLSTMVLDKLKIDDAVGAIPVHLSSGIWGTLAVGIFGNLDILNTGLNRGGQIIIQLVGIITCGVWAFGISFVFLFLLNKIYPLRIGLKEEIDGLNKSEHGTSTEIFDLYTVLHHQASTGDISLRAPVEPFTEVGQIAGIYNEVLDKLEENTVEKGDYLNILENVSDGIFLLSQNGGIGKYYSKSLELILEEKSLADFSFITFIEKILLEVDKNLFKDFLDVAFNPATQWRHVERLNPLREVDAYFDNNQGSFRTKHLVFNFKRVEKKGEIINLLVMVSDVSEEFELNKEIEHTRKKSHIEMELLYKILHVEPTVLREFFKFSNKDLIEINSIFQKGSDSSRDKLEKAFRLSHGIKGDAELLELNFISEKAEELELSMQKILKSSEIDTEDFIPLTLKFSELQNTFNKIQELLSKWAGFQANGGSIHNTDNYLKEHLVKMCSRLSTKYDKAVQLKLDGFSIEKFSEEQFKPIQNIIIQLMRNAIYHGIESSEKRVALGKKAIGLIYIKVEESEDTLHLVFSDDGEGLNLQNIRKKAYDERIITKEQFDKLSDNIIPRLIFKQGLSTAKKADVVAGKGVGMPLVNNLIRDLDGSITIRSRADVGCQFVIKIPKILNREVVTV
>NZ_CP035807.1|WP_149567974.1|1862880_1863327_-|chemotaxis-protein-CheX
MKESELKAFIKIVTEYFESITGIAAKMGLPFIKDESTGVFDFTGIIGVSGARKGGVYFTAPKELLYEFGGYLLEGDKVEDDDLYDLIGEMTNTISGNMREFFGTTFLISVPIVLKGQVENIDMRLNPPVFIIPIEWQYNDCHLAIGLE
>NZ_CP035807.1|WP_149567975.1|1863323_1863689_-|response-regulator
MKLLIVDDSNIMRRAINKYLKEFKLEIVGSACNGEEAVEICKSKKPDLVTLDITMPKMDGLTCLTEILKIAPETKILVISALSDYGTGLLALKKGAMGFLPKPFTASELQEEIKFICGIMV
>NZ_CP035807.1|WP_149567976.1|1863866_1864970_+|aldo/keto-reductase
MLYKMYGKTGKRVSAVGFGGMRFDETKTIEENAEIVRYASSKGINYFDTAPGYCSDTSEDIFGEAFKNMPNPFYVSTKGMPTTYDTAEKAIDAVKKSIKRMGLKKIDFYHIWCIRKSEHYELAMKPGGQYEGLLQCQKEGLIDHIVLSSHQNGNEVKEILIDKKIDGILLGVNILNFPYRWEAVETAYNMGYGVVAMNPLSGGAIPTHEKELQFLTNGKETATEAALRFVISCPQITIALNGFTTKEHIDTACKIANESKPFEQDEIKRIENLVGESMNEACTGCGYCDKCPQGIAIPSFLQYYNEKHVFHKSDKEMKENIVGAYEWGILAGKKGTAADCTSCGLCEDECTQHLPIIDRLKEITSWT
>NZ_CP035807.1|WP_149567977.1|1865077_1866913_+|HAMP-domain-containing-protein
MKIRSKLLLLTFIMIISIFLSVGVNVGVGIFTNKMQSEEKELVLLRDLMLQQSIELSKLLHSNTPTIIQYKTLKNRIDETNQVIDRVKVLKVLPKLNKTTADAFESIKKLDVLLKKSYEKLYAETDDFIATFDKNDTSFSISKINSYKNMDNFTRIMFRANRVTTQGFTVDVALEASSSLLLEQSGIINRVVTNYKKISNFVSLGVALIFIILSVFISLIISGKISKSINKLSSALTIMLAGDFTHEIKIDSKDELGLLGDEINVFQENLNKSLIRIKASSRANEDANIGLIETTADSSAVSTQISANIDSINSQMHQLDSNIAKSNDEVQDVSQFTNKLNDFTSEQMAMVEESTAAITEMIASISSISDLTNNNSKIITTLESTAKEGDNKLTETTDLIDEINSTVNEINSMSEIIQNISDQTNLLAMNAAIEAAHAGDAGKGFAVVADEIRKLAEASAMNSKDISKNLDDITKKFEKASLSGQSTREAFTNINDNIKNVSSALMVVASSTTELDTGGSQILEAMESLKEISIAVQDKAYEMKSKAENINNISSDVLNISQVVSGAITEANIGFTGVTDSMNSLKDVSDRVGVVSKEINHELDKFKTKES
>NZ_CP035807.1|WP_149567978.1|1866899_1867439_-|hypothetical-protein
MEKNLVLYYSKTGSNRFLAEKIGEKLGCGVVEVKPRFNSFLYIALSTAFNRGFGVKGLDIDLNDYSRLIICSPIWFGKVLSPISDLISKHKAVISRVYFASCCGSSDDKKDEKFGYSSTHNQLKELLGEKLINFEAFPIGLVIPQDKLNDDKAMMNTRLSEDTINSSVEKRLDNFIKTL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP035807_3	3.9\|1850184\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1850184-1850213	30	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	891977-892006	5	0.833
NZ_CP035807_4	4.5\|1851887\|30\|NZ_CP035807\|CRISPRCasFinder,CRT	1851887-1851916	30	KP735928	Staphylococcus phage IME-SA4, complete genome	8590-8619	5	0.833
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	CP062992	Klebsiella phage AShe-2020a, complete genome	149148-149177	5	0.833
NZ_CP035807_3	3.2\|1849722\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849722-1849751	30	NZ_CP040343	Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence	310414-310443	6	0.8
NZ_CP035807_3	3.2\|1849722\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849722-1849751	30	NZ_CP041978	Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence	150057-150086	6	0.8
NZ_CP035807_3	3.2\|1849722\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849722-1849751	30	CP041980	Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence	133014-133043	6	0.8
NZ_CP035807_3	3.2\|1849722\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849722-1849751	30	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	188129-188158	6	0.8
NZ_CP035807_4	4.1\|1851623\|30\|NZ_CP035807\|CRISPRCasFinder,CRT	1851623-1851652	30	KF929199	Staphylococcus phage vB_SepS_SEP9, complete genome	3112-3141	6	0.8
NZ_CP035807_4	4.7\|1852019\|30\|NZ_CP035807\|CRISPRCasFinder,CRT	1852019-1852048	30	MN694730	Marine virus AFVG_250M981, complete genome	37744-37773	6	0.8
NZ_CP035807_4	4.16\|1852613\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852613-1852642	30	KY971610	Pseudomonas phage PspYZU05, complete genome	155170-155199	6	0.8
NZ_CP035807_4	4.29\|1853471\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853471-1853500	30	MN693652	Marine virus AFVG_250M189, complete genome	34753-34782	6	0.8
NZ_CP035807_3	3.4\|1849854\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849854-1849883	30	MT774383	CrAssphage cr11_1, complete genome	47179-47208	7	0.767
NZ_CP035807_3	3.5\|1849920\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849920-1849949	30	NZ_CP028328	Lactobacillus sp. D1501 plasmid p2, complete sequence	1970-1999	7	0.767
NZ_CP035807_3	3.7\|1850052\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1850052-1850081	30	MT767754	Microcystis phage vB_MweS-yong1, complete genome	20613-20642	7	0.767
NZ_CP035807_4	4.7\|1852019\|30\|NZ_CP035807\|CRISPRCasFinder,CRT	1852019-1852048	30	MN694725	Marine virus AFVG_250M823, complete genome	37615-37644	7	0.767
NZ_CP035807_4	4.14\|1852481\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852481-1852510	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	853606-853635	7	0.767
NZ_CP035807_4	4.14\|1852481\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852481-1852510	30	MN694403	Marine virus AFVG_250M373, complete genome	26934-26963	7	0.767
NZ_CP035807_4	4.15\|1852547\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852547-1852576	30	LC553734	Escherichia phage EK010 DNA, complete sequence	24084-24113	7	0.767
NZ_CP035807_4	4.16\|1852613\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852613-1852642	30	NZ_CP015111	Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence	41649-41678	7	0.767
NZ_CP035807_4	4.22\|1853009\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853009-1853038	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	4982-5011	7	0.767
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	MN855796	Siphoviridae sp. isolate 92, complete genome	5535-5564	7	0.767
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	MN855791	Bacteriophage sp. isolate 82, complete genome	3187-3216	7	0.767
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	KT240186	Dickeya phage BF25/12, complete genome	21225-21254	7	0.767
NZ_CP035807_4	4.26\|1853273\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853273-1853302	30	NC_011737	Gloeothece citriformis PCC 7424 plasmid pP742402, complete sequence	1309-1338	7	0.767
NZ_CP035807_4	4.27\|1853339\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853339-1853368	30	MN692986	Marine virus AFVG_117M62, complete genome	58383-58412	7	0.767
NZ_CP035807_4	4.27\|1853339\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853339-1853368	30	NZ_CP031652	Pantoea agglomerans strain TH81 plasmid unnamed3, complete sequence	131440-131469	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_047733	Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome	58525-58554	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	JF974289	Synechococcus phage S-RIM8 A.HR3, complete genome	58524-58553	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MK493323	Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome	58243-58272	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MK493325	Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome	58171-58200	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MK493322	Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome	58174-58203	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KX349288	Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome	58174-58203	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_020486	Synechococcus phage S-RIM8 A.HR1, complete genome	58524-58553	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KX349286	Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome	58394-58423	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	HQ317385	Synechococcus phage S-RIM8 A.HR5, complete genome	58524-58553	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MK493324	Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome	58171-58200	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KX349290	Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome	58171-58200	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KX349285	Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome	58243-58272	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KX349287	Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome	58171-58200	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KY290955	Aeromonas phage 65.2, complete genome	229777-229806	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_015251	Aeromonas phage 65, complete genome	228438-228467	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	JF974293	Cyanophage KBS-M-1A genomic sequence	158780-158809	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MN032614	Aeromonas phage PS1, complete genome	218759-218788	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MH538296	Bacillus phage Maceta, complete genome	38123-38152	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MN453779	Aeromonas phage PS2, complete genome	221839-221868	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	221136-221165	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	191036-191065	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MF288922	Bacillus phage Janet, complete genome	38827-38856	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_024216	Bacillus phage CAM003, complete genome	38759-38788	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KJ489400	Bacillus phage Hoody T, complete genome	38580-38609	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MF288921	Bacillus phage OTooleKemple52, complete genome	38190-38219	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MH638310	Bacillus phage Kamfam, complete genome	38190-38219	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MK215646	Bacillus phage vB_BthM-Goe5, complete genome	36617-36646	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	KU737346	Bacillus phage Vinny, complete genome	39089-39118	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_024207	Bacillus phage Evoli, complete genome	38484-38513	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MF498901	Bacillus phage Anthony, complete genome	39090-39119	7	0.767
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_018856	Bacillus phage Bastille, complete genome	12736-12765	7	0.767
NZ_CP035807_4	4.32\|1853669\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853669-1853698	30	NC_008012	Lawsonia intracellularis PHE/MN1-00 plasmid 1, complete sequence	463-492	7	0.767
NZ_CP035807_4	4.32\|1853669\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853669-1853698	30	NC_020128	Lawsonia intracellularis N343 plasmid 1, complete sequence	509-538	7	0.767
NZ_CP035807_3	3.3\|1849788\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849788-1849817	30	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	192803-192832	8	0.733
NZ_CP035807_3	3.4\|1849854\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849854-1849883	30	KX815270	Methylophilaceae phage P19250A, complete genome	13783-13812	8	0.733
NZ_CP035807_3	3.4\|1849854\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849854-1849883	30	MT774398	CrAssphage cr60_1, complete genome	87893-87922	8	0.733
NZ_CP035807_3	3.4\|1849854\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849854-1849883	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	247455-247484	8	0.733
NZ_CP035807_3	3.5\|1849920\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849920-1849949	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	342965-342994	8	0.733
NZ_CP035807_3	3.8\|1850118\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1850118-1850147	30	KY921761	Bacillus phage BeachBum, complete genome	8036-8065	8	0.733
NZ_CP035807_4	4.5\|1851887\|30\|NZ_CP035807\|CRISPRCasFinder,CRT	1851887-1851916	30	NC_019774	Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence	36679-36708	8	0.733
NZ_CP035807_4	4.15\|1852547\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852547-1852576	30	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	417057-417086	8	0.733
NZ_CP035807_4	4.17\|1852679\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852679-1852708	30	NZ_CP042840	Enterococcus sp. DA9 plasmid unnamed4	51836-51865	8	0.733
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	277107-277136	8	0.733
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	AP017992	Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence	54610-54639	8	0.733
NZ_CP035807_4	4.23\|1853075\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853075-1853104	30	NZ_CP014580	Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence	225616-225645	8	0.733
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	NC_022880	Enterococcus mundtii QU 25 plasmid pQY039, complete sequence	13121-13150	8	0.733
NZ_CP035807_3	3.2\|1849722\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849722-1849751	30	NZ_CP043512	Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed1, complete sequence	124277-124306	9	0.7
NZ_CP035807_3	3.3\|1849788\|30\|NZ_CP035807\|PILER-CR,CRISPRCasFinder,CRT	1849788-1849817	30	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	280575-280604	9	0.7
NZ_CP035807_4	4.16\|1852613\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852613-1852642	30	NZ_CP023312	Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence	57296-57325	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_KU302800	Enterobacter cloacae strain SZECL1 plasmid pKPC3_SZ clone ST231, complete sequence	4933-4962	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_CP040856	Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence	49488-49517	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_CP042976	Klebsiella pneumoniae strain KPN55602 plasmid pK55602_2, complete sequence	6209-6238	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_MN268581	Klebsiella pneumoniae strain KP18-50 plasmid pKP18-50-tet(A), complete sequence	8072-8101	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_MF156712	Morganella morganii strain GN28 plasmid pGN28-KPC, complete sequence	4933-4962	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_MF156709	Klebsiella aerogenes strain E20 plasmid pE20-KPC, complete sequence	4933-4962	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_MF156710	Proteus mirabilis strain GN2 plasmid pGN2-KPC, complete sequence	4933-4962	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_MF156711	Serratia marcescens strain GN26 plasmid pGN26-KPC, complete sequence	4933-4962	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	MH926056	Corynebacterium phage Cruella, complete genome	21521-21550	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	MG198776	Corynebacterium phage C3PO, complete genome	21521-21550	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	MK977700	Corynebacterium phage Stickynote, complete genome	21788-21817	9	0.7
NZ_CP035807_4	4.21\|1852943\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1852943-1852972	30	NZ_CP024709	Klebsiella pneumoniae strain cr-hvkp3 plasmid pPUTH2, complete sequence	44252-44281	9	0.7
NZ_CP035807_4	4.22\|1853009\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853009-1853038	30	MH791397	UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome	144923-144952	9	0.7
NZ_CP035807_4	4.22\|1853009\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853009-1853038	30	AP017994	Planktothrix agardhii NIES-204 plasmid plasmid3 DNA, complete sequence	49606-49635	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	MK268686	Enterococcus phage vB_EfaH_EF1TV, complete genome	9866-9895	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	AP018714	Enterococcus phage phiEF17H DNA, complete sequence	118001-118030	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	MK693030	Enterococcus phage vB_EfaM_Ef2.1, complete genome	10296-10325	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	NC_009904	Enterococcus phage phiEF24C, complete genome	115098-115127	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	AP009390	Enterococcus phage phiEF24C DNA, complete genome	115098-115127	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	CAJDJY010000002	Enterococcus phage 156 genome assembly, contig: phage156-genome, whole genome shotgun sequence	115917-115946	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	AB609718	Enterococcus phage phiEF24C-P2 DNA, complete genome	115098-115127	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	LR031359	Enterococcus phage 156, complete genome	115917-115946	9	0.7
NZ_CP035807_4	4.25\|1853207\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853207-1853236	30	NC_029026	Enterococcus phage EFLK1, complete genome	12983-13012	9	0.7
NZ_CP035807_4	4.31\|1853603\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853603-1853632	30	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	527560-527589	9	0.7
NZ_CP035807_4	4.31\|1853603\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853603-1853632	30	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	488139-488168	9	0.7
NZ_CP035807_4	4.30\|1853537\|30\|NZ_CP035807\|CRISPRCasFinder,CRT,PILER-CR	1853537-1853566	30	MG543995	Staphylococcus phage UPMK_1, partial genome	11219-11248	10	0.667

1. spacer 3.9|1850184|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 5, identity: 0.833

agatccaggg--agatagaattttctgatgat	CRISPR spacer
--atcgagaggtagttagaattttctgatgat	Protospacer
  *** **.*  ** *****************

2. spacer 4.5|1851887|30|NZ_CP035807|CRISPRCasFinder,CRT matches to KP735928 (Staphylococcus phage IME-SA4, complete genome) position: , mismatch: 5, identity: 0.833

atgta-aaatgttggcattactttaaaaatt	CRISPR spacer
-tgaacaaatgatggcattaatttaaaaata	Protospacer
 ** * ***** ******** *********

3. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to CP062992 (Klebsiella phage AShe-2020a, complete genome) position: , mismatch: 5, identity: 0.833

gaaacg-aaggttttgattacttctggaaaa	CRISPR spacer
-atgcgtaaggttatgatttcttctggaaaa	Protospacer
 * .** ****** ***** ***********

4. spacer 3.2|1849722|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gcttcatcatgagaaataatgctatttaaa	CRISPR spacer
gatatttcatgaaaaataaagctatttaaa	Protospacer
* * . ******.****** **********

5. spacer 3.2|1849722|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gcttcatcatgagaaataatgctatttaaa	CRISPR spacer
gatatttcatgaaaaataaagctatttaaa	Protospacer
* * . ******.****** **********

6. spacer 3.2|1849722|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcttcatcatgagaaataatgctatttaaa	CRISPR spacer
gatatttcatgaaaaataaagctatttaaa	Protospacer
* * . ******.****** **********

7. spacer 3.2|1849722|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcttcatcatgagaaataatgctatttaaa	CRISPR spacer
tcttcatcatgagtaataatgatacatgaa	Protospacer
 ************ ******* **. *.**

8. spacer 4.1|1851623|30|NZ_CP035807|CRISPRCasFinder,CRT matches to KF929199 (Staphylococcus phage vB_SepS_SEP9, complete genome) position: , mismatch: 6, identity: 0.8

gtgttgaattagtagctgaggaagagttaa	CRISPR spacer
ttatcaaattagtagtttaggaagagttaa	Protospacer
 *.*..*********.* ************

9. spacer 4.7|1852019|30|NZ_CP035807|CRISPRCasFinder,CRT matches to MN694730 (Marine virus AFVG_250M981, complete genome) position: , mismatch: 6, identity: 0.8

tccggaagcaaccaggatggttactaaagt	CRISPR spacer
tccggaaggaaccagggtggttactgataa	Protospacer
******** *******.********.* .

10. spacer 4.16|1852613|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.8

attccattgcaattttaactttaggcgtta	CRISPR spacer
attctcttgcaattttaactttagtcttat	Protospacer
****. ****************** * *

11. spacer 4.29|1853471|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN693652 (Marine virus AFVG_250M189, complete genome) position: , mismatch: 6, identity: 0.8

---atctcaacatggattccttttatatcaaaa	CRISPR spacer
ccagtttcatca---attccttttatatcaaaa	Protospacer
   .*.*** **   ******************

12. spacer 3.4|1849854|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to MT774383 (CrAssphage cr11_1, complete genome) position: , mismatch: 7, identity: 0.767

aagagtgcttagatctttatctttatcaaa	CRISPR spacer
ataaggatttaaatctttatctttatcaag	Protospacer
* .** ..***.*****************.

13. spacer 3.5|1849920|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028328 (Lactobacillus sp. D1501 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

agatataaatcaaacgagacttaataatat	CRISPR spacer
ccttataaatcatacgaggcttaatacttt	Protospacer
   ********* *****.******* * *

14. spacer 3.7|1850052|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to MT767754 (Microcystis phage vB_MweS-yong1, complete genome) position: , mismatch: 7, identity: 0.767

aagtggcagggtattgttaggagtattgac--	CRISPR spacer
tggtggcagggtattgttgggagtg--ggcta	Protospacer
 .****************.*****.  *.*

15. spacer 4.7|1852019|30|NZ_CP035807|CRISPRCasFinder,CRT matches to MN694725 (Marine virus AFVG_250M823, complete genome) position: , mismatch: 7, identity: 0.767

tccggaagcaaccaggatggttactaaagt	CRISPR spacer
tccggaaggaaccaggatcgttacggataa	Protospacer
******** ********* ***** .* .

16. spacer 4.14|1852481|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.767

gtagtttagcattactagttttattattag	CRISPR spacer
gtattttagcagtactagttttagttgtgc	Protospacer
*** ******* *********** *  *.

17. spacer 4.14|1852481|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN694403 (Marine virus AFVG_250M373, complete genome) position: , mismatch: 7, identity: 0.767

gtagtttagcattactagttttattattag	CRISPR spacer
gacctttagcattaccacttttattataaa	Protospacer
*   ***********.* ********* *.

18. spacer 4.15|1852547|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to LC553734 (Escherichia phage EK010 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcacccgattcatcaagaacatctgtt	CRISPR spacer
cagtcaccagattcaacaagaacatcttgt	Protospacer
.  ***** ****** ***********  *

19. spacer 4.16|1852613|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015111 (Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attccattgcaattttaactttaggcgtta	CRISPR spacer
catccatggcaattttaactttaagctaca	Protospacer
  ***** ***************.**  .*

20. spacer 4.22|1853009|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 7, identity: 0.767

-----taggtatttagtcaaattatagtttgtatg	CRISPR spacer
gttaacagg-----agtcaaattatagtttctatg	Protospacer
     .***     **************** ****

21. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN855796 (Siphoviridae sp. isolate 92, complete genome) position: , mismatch: 7, identity: 0.767

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
taaggccaacctctggcacaaagttcttga	Protospacer
 *** ********** ********* *.

22. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN855791 (Bacteriophage sp. isolate 82, complete genome) position: , mismatch: 7, identity: 0.767

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
taaggccaacctctggcacaaagttcttga	Protospacer
 *** ********** ********* *.

23. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KT240186 (Dickeya phage BF25/12, complete genome) position: , mismatch: 7, identity: 0.767

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
taaggccaacctctggcacaaagttcttga	Protospacer
 *** ********** ********* *.

24. spacer 4.26|1853273|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_011737 (Gloeothece citriformis PCC 7424 plasmid pP742402, complete sequence) position: , mismatch: 7, identity: 0.767

cttagatgatttgttagaaaacggttttat	CRISPR spacer
tttagatgatttattagaaaacttgcttaa	Protospacer
.***********.*********   .***

25. spacer 4.27|1853339|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN692986 (Marine virus AFVG_117M62, complete genome) position: , mismatch: 7, identity: 0.767

agcatccgtgatagaataattattaatagt	CRISPR spacer
agagataatggtagaataattattaatagt	Protospacer
** . . .**.*******************

26. spacer 4.27|1853339|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031652 (Pantoea agglomerans strain TH81 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

agcatccgtgatagaataattattaatagt	CRISPR spacer
acgctacgtgatagaataattaataatttt	Protospacer
*   * **************** ****  *

27. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_047733 (Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

28. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to JF974289 (Synechococcus phage S-RIM8 A.HR3, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

29. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK493323 (Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

30. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK493325 (Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

31. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK493322 (Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

32. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KX349288 (Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

33. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_020486 (Synechococcus phage S-RIM8 A.HR1, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

34. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KX349286 (Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

35. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to HQ317385 (Synechococcus phage S-RIM8 A.HR5, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

36. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK493324 (Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

37. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KX349290 (Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

38. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KX349285 (Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

39. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KX349287 (Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

40. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KY290955 (Aeromonas phage 65.2, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgt-cttctttaaattctgtcattaaa	CRISPR spacer
-atagatggttctttaaattctgtcaataaa	Protospacer
 .*  .*  ***************** ****

41. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_015251 (Aeromonas phage 65, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgt-cttctttaaattctgtcattaaa	CRISPR spacer
-atagatggttctttaaattctgtcaataaa	Protospacer
 .*  .*  ***************** ****

42. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to JF974293 (Cyanophage KBS-M-1A genomic sequence) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
ctgaagtcttctttcaattatgtcattaac	Protospacer
*    ********* **** *********

43. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN032614 (Aeromonas phage PS1, complete genome) position: , mismatch: 7, identity: 0.767

-cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
gcattt-tcttctttaaattctgtttttaat	Protospacer
 *.*.. *****************. ****

44. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MH538296 (Bacillus phage Maceta, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

45. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MN453779 (Aeromonas phage PS2, complete genome) position: , mismatch: 7, identity: 0.767

-cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
gcattt-tcttctttaaattctgtttttaat	Protospacer
 *.*.. *****************. ****

46. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
gaaccgtcttcgttaaatgctgtcataaga	Protospacer
 . ******** ****** ******* *.*

47. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
gcttcgtgatctttaaattctgtcatttga	Protospacer
  *.***  ****************** .*

48. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MF288922 (Bacillus phage Janet, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

49. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_024216 (Bacillus phage CAM003, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

50. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

51. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MF288921 (Bacillus phage OTooleKemple52, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

52. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MH638310 (Bacillus phage Kamfam, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

53. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

54. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to KU737346 (Bacillus phage Vinny, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

55. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_024207 (Bacillus phage Evoli, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

56. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

57. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_018856 (Bacillus phage Bastille, complete genome) position: , mismatch: 7, identity: 0.767

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
tctgcttcttttttcaattctgtcattaat	Protospacer
. * * ****.*** **************

58. spacer 4.32|1853669|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_008012 (Lawsonia intracellularis PHE/MN1-00 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

taatcatcgtaagaacctgtaactttatat	CRISPR spacer
aatactacgttagaacctgtaaccttatat	Protospacer
 *  *  *** ************.******

59. spacer 4.32|1853669|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_020128 (Lawsonia intracellularis N343 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

taatcatcgtaagaacctgtaactttatat	CRISPR spacer
aatactacgttagaacctgtaaccttatat	Protospacer
 *  *  *** ************.******

60. spacer 3.3|1849788|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

accttctgattcccaccgctcttggattaa	CRISPR spacer
accttctgattccgaccgctcgagggcagc	Protospacer
************* *******  **.. .

61. spacer 3.4|1849854|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to KX815270 (Methylophilaceae phage P19250A, complete genome) position: , mismatch: 8, identity: 0.733

aagagtgcttagatctttatctttatcaaa	CRISPR spacer
atatacacttggatctttatctttaccaaa	Protospacer
* . ...***.**************.****

62. spacer 3.4|1849854|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to MT774398 (CrAssphage cr60_1, complete genome) position: , mismatch: 8, identity: 0.733

aagagtgcttagatctttatctttatcaaa	CRISPR spacer
gcgttctcttaaatctttatctgtatcaaa	Protospacer
. *  . ****.********** *******

63. spacer 3.4|1849854|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 8, identity: 0.733

aagagtgcttagatctttatctttatcaaa	CRISPR spacer
ttcaatcattatatctttatctttatcaag	Protospacer
   *.*  *** *****************.

64. spacer 3.5|1849920|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

agatataaatcaaacgagacttaataatat	CRISPR spacer
gtccataaatcaaaggagatttaataaagt	Protospacer
.  .********** ****.******* .*

65. spacer 3.8|1850118|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to KY921761 (Bacillus phage BeachBum, complete genome) position: , mismatch: 8, identity: 0.733

agatagattatctagtttatcccatgatat	CRISPR spacer
tacaaagttatctagtttatcccaagataa	Protospacer
 .  *..***************** ****

66. spacer 4.5|1851887|30|NZ_CP035807|CRISPRCasFinder,CRT matches to NC_019774 (Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence) position: , mismatch: 8, identity: 0.733

atgtaaaatgttggcattactttaaaaatt	CRISPR spacer
atagtgctggttggcatttctttaaaaatt	Protospacer
**.  .   ********* ***********

67. spacer 4.15|1852547|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.733

ttctcacccgattcatcaagaacatctgtt	CRISPR spacer
cctgtaaccgattgaccaagaacatctgtt	Protospacer
... .* ****** *.**************

68. spacer 4.17|1852679|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042840 (Enterococcus sp. DA9 plasmid unnamed4) position: , mismatch: 8, identity: 0.733

ctggctctgttaactcttcaaatgtataaa	CRISPR spacer
tagactgttttaactcttcaaatgtatttg	Protospacer
. *.** * ******************  .

69. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aagaaaaaggttttgattacttcgggagtg	Protospacer
.*.* .***************** ***. .

70. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
ttttctaaggttttaattaattctggaaac	Protospacer
    * ********.**** *********

71. spacer 4.23|1853075|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014580 (Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence) position: , mismatch: 8, identity: 0.733

ggtggtatcatgtggggcatgttcactctt	CRISPR spacer
tatctgttcctgtggggcatgttcacgctt	Protospacer
 .*    ** **************** ***

72. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_022880 (Enterococcus mundtii QU 25 plasmid pQY039, complete sequence) position: , mismatch: 8, identity: 0.733

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
atatctccttctttaattgctgtcattaaa	Protospacer
   .* .********* * ***********

73. spacer 3.2|1849722|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043512 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gcttcatcatgagaaataatgctatttaaa	CRISPR spacer
tactcataatgagaaataatgcttttgttt	Protospacer
  .**** *************** **

74. spacer 3.3|1849788|30|NZ_CP035807|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 9, identity: 0.7

accttctgattcccaccgctcttggattaa	CRISPR spacer
gccttctgattcccagcgttcttgtgcggt	Protospacer
.************** **.***** .. .

75. spacer 4.16|1852613|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023312 (Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence) position: , mismatch: 9, identity: 0.7

attccattgcaattttaactttaggcgtta	CRISPR spacer
tacaagttgcaatcttaactttagtcgttg	Protospacer
  .  .*******.********** ****.

76. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU302800 (Enterobacter cloacae strain SZECL1 plasmid pKPC3_SZ clone ST231, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

77. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040856 (Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aatcacccagttttgatgacttctggaaaa	Protospacer
.*      .******** ************

78. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042976 (Klebsiella pneumoniae strain KPN55602 plasmid pK55602_2, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

79. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN268581 (Klebsiella pneumoniae strain KP18-50 plasmid pKP18-50-tet(A), complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

80. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF156712 (Morganella morganii strain GN28 plasmid pGN28-KPC, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

81. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF156709 (Klebsiella aerogenes strain E20 plasmid pE20-KPC, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

82. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF156710 (Proteus mirabilis strain GN2 plasmid pGN2-KPC, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

83. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF156711 (Serratia marcescens strain GN26 plasmid pGN26-KPC, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

84. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MH926056 (Corynebacterium phage Cruella, complete genome) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
gcaacgaaggttttgattccttcgtatctc	Protospacer
* **************** ****  .

85. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MG198776 (Corynebacterium phage C3PO, complete genome) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
gcaacgaaggttttgattccttcgtatctc	Protospacer
* **************** ****  .

86. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK977700 (Corynebacterium phage Stickynote, complete genome) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
gcaacgaaggttttgattccttcgtatctc	Protospacer
* **************** ****  .

87. spacer 4.21|1852943|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024709 (Klebsiella pneumoniae strain cr-hvkp3 plasmid pPUTH2, complete sequence) position: , mismatch: 9, identity: 0.7

gaaacgaaggttttgattacttctggaaaa	CRISPR spacer
aaaacgaaggttttgtttactttttccgtt	Protospacer
.************** ******.*   .

88. spacer 4.22|1853009|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 9, identity: 0.7

taggtatttagtcaaattatagtttgtatg	CRISPR spacer
cttacatttactcaaattataatttgtaca	Protospacer
.  ..***** **********.******..

89. spacer 4.22|1853009|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to AP017994 (Planktothrix agardhii NIES-204 plasmid plasmid3 DNA, complete sequence) position: , mismatch: 9, identity: 0.7

taggtatttagtcaaattatagtttgtatg	CRISPR spacer
agaagttttagtaaaattatagtttatatt	Protospacer
 ...  ****** ************.***

90. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK268686 (Enterococcus phage vB_EfaH_EF1TV, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

91. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to AP018714 (Enterococcus phage phiEF17H DNA, complete sequence) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

92. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MK693030 (Enterococcus phage vB_EfaM_Ef2.1, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

93. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_009904 (Enterococcus phage phiEF24C, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

94. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to AP009390 (Enterococcus phage phiEF24C DNA, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

95. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to CAJDJY010000002 (Enterococcus phage 156 genome assembly, contig: phage156-genome, whole genome shotgun sequence) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

96. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to AB609718 (Enterococcus phage phiEF24C-P2 DNA, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

97. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to LR031359 (Enterococcus phage 156, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

98. spacer 4.25|1853207|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NC_029026 (Enterococcus phage EFLK1, complete genome) position: , mismatch: 9, identity: 0.7

aaagtccaacctctgccacaaagttatccc	CRISPR spacer
gttctccaagctctaccacaaagttatttg	Protospacer
.   ***** ****.************..

99. spacer 4.31|1853603|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.7

tctatgaagttcgccctggaggggcacaac	CRISPR spacer
gggcagaagttcggcctggaggggcatggc	Protospacer
     ******** ************...*

100. spacer 4.31|1853603|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.7

tctatgaagttcgccctggaggggcacaac	CRISPR spacer
gggcagaagttcggcctggaggggcatggc	Protospacer
     ******** ************...*

101. spacer 4.30|1853537|30|NZ_CP035807|CRISPRCasFinder,CRT,PILER-CR matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 10, identity: 0.667

cgtccgtcttctttaaattctgtcattaaa	CRISPR spacer
taaggtagttctttaaattctgttattaac	Protospacer
..      ***************.*****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

494253 : 523652

Leptospira_phage(33.33%)

bacteriocin,transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149566815.1\|494253_494862_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_149566816.1\|494916_495099_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_149566817.1\|495113_495338_-	hypothetical protein	NA	NA	NA	NA
WP_149566818.1\|495415_495694_-	hypothetical protein	NA	NA	NA	NA
WP_149566819.1\|497734_497965_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_149566820.1\|498003_498717_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_149566821.1\|498879_499185_+	hypothetical protein	NA	NA	NA	NA
WP_149566822.1\|499184_499532_+	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	1.1e-17	51.9
WP_149566823.1\|499573_501142_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.5e-101	38.8
WP_149566824.1\|501393_502254_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_149566825.1\|502324_502516_-	hypothetical protein	NA	NA	NA	NA
WP_149566826.1\|502689_502923_-	hypothetical protein	NA	NA	NA	NA
WP_149566827.1\|502925_503156_-	hypothetical protein	NA	NA	NA	NA
WP_149566828.1\|503215_503554_-	hypothetical protein	NA	NA	NA	NA
WP_149566829.1\|503973_504738_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_149566830.1\|504752_504974_-	hypothetical protein	NA	NA	NA	NA
WP_149566831.1\|505596_506349_+	hypothetical protein	NA	NA	NA	NA
WP_149566832.1\|506360_507611_-	valine--pyruvate transaminase	NA	NA	NA	NA
WP_149566833.1\|507617_507932_-	hypothetical protein	NA	NA	NA	NA
WP_149566834.1\|507933_510585_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.2e-173	42.6
WP_149566835.1\|510682_511894_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_149566836.1\|511920_513213_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A219Y950	Aeromonas_phage	1.3e-95	50.5
WP_149566837.1\|513228_514767_-	hypothetical protein	NA	NA	NA	NA
WP_149566838.1\|514753_515191_-	hypothetical protein	NA	NA	NA	NA
WP_149566839.1\|515183_515363_-	hypothetical protein	NA	NA	NA	NA
WP_149566840.1\|515513_516032_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_149566841.1\|516031_517432_-\|tRNA	cysteine--tRNA ligase	F1C984	Moumouvirus	2.3e-45	34.0
WP_149566842.1\|517484_518399_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_149566843.1\|518402_519746_+	magnesium transporter	NA	NA	NA	NA
WP_149566844.1\|519747_520668_-	hypothetical protein	NA	NA	NA	NA
WP_149569561.1\|520675_521395_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_149569562.1\|521411_523652_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.7e-149	40.5

DBSCAN-SWA_2

635192 : 689544

Rhodococcus_phage(11.11%)

integrase,transposase,protease,tRNA

attL 632419:632435|attR 698606:698622

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
632419:632435	attL	NA	NA	NA	NA
WP_149569566.1\|635192_636431_-\|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	NA	NA	NA	NA
WP_149566943.1\|636462_637776_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_149566944.1\|637847_638633_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_149566945.1\|638657_638885_-	50S ribosomal protein L28	NA	NA	NA	NA
WP_149566946.1\|639091_639523_+	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_149566947.1\|639531_640287_+	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
WP_149566948.1\|640277_641186_+	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_149566949.1\|641222_641612_-	META domain-containing protein	NA	NA	NA	NA
WP_149566950.1\|641672_642785_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_149566951.1\|643000_643906_-	nucleotidyltransferase	NA	NA	NA	NA
WP_149566952.1\|643945_644728_-	PHP domain-containing protein	A0A1I9SA84	Rhodococcus_phage	1.9e-20	30.7
WP_149566953.1\|644818_645718_+	hypothetical protein	NA	NA	NA	NA
WP_149566954.1\|645719_646511_-	hypothetical protein	NA	NA	NA	NA
WP_149566955.1\|646514_647180_-	TPM domain-containing protein	NA	NA	NA	NA
WP_149566956.1\|647181_647796_-	LemA family protein	NA	NA	NA	NA
WP_149566957.1\|647854_649207_-	hypothetical protein	NA	NA	NA	NA
WP_149566958.1\|649203_650358_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_149566959.1\|650330_651305_-	AAA domain-containing protein	NA	NA	NA	NA
WP_149566960.1\|651297_652179_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA
WP_149566961.1\|652239_652749_-	hypothetical protein	NA	NA	NA	NA
WP_149566962.1\|652796_654089_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_149566963.1\|654343_655591_+	diguanylate cyclase	W8CYM9	Bacillus_phage	8.0e-05	29.4
WP_149566964.1\|655590_657093_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_149566965.1\|657085_658939_-	protein kinase	A0A2H4UW49	Bodo_saltans_virus	2.8e-22	33.5
WP_149566966.1\|658931_659927_-	hypothetical protein	NA	NA	NA	NA
WP_149566967.1\|660043_661702_-	asparagine synthase B	E5EQ62	Micromonas_sp._RCC1109_virus	9.3e-94	40.2
WP_149566968.1\|661825_663052_-	aminopeptidase	NA	NA	NA	NA
WP_149566969.1\|663041_663770_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_149566970.1\|663830_664943_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_149566971.1\|665147_665945_-	metal ABC transporter permease	NA	NA	NA	NA
WP_149566972.1\|665937_666951_-	DUF1893 domain-containing protein	NA	NA	NA	NA
WP_149566973.1\|667104_667602_+	flavodoxin	NA	NA	NA	NA
WP_149566974.1\|667663_668374_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_149566975.1\|668734_669202_+	hypothetical protein	NA	NA	NA	NA
WP_149566976.1\|669203_670349_+	radical SAM protein	NA	NA	NA	NA
WP_149566977.1\|670345_671035_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-16	31.2
WP_149566978.1\|671031_671682_+	hypothetical protein	NA	NA	NA	NA
WP_149566979.1\|671674_672232_+	hypothetical protein	NA	NA	NA	NA
WP_149569567.1\|672493_672823_+\|transposase	transposase domain-containing protein	S5VTD3	Leptospira_phage	2.5e-06	55.8
WP_149566980.1\|673015_673615_-	hypothetical protein	NA	NA	NA	NA
WP_149566981.1\|673611_674532_-	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_149566982.1\|674687_675488_-	hypothetical protein	NA	NA	NA	NA
WP_149566983.1\|675532_675787_-	hypothetical protein	NA	NA	NA	NA
WP_149569568.1\|676216_677008_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_149566984.1\|677058_677796_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	1.5e-14	28.6
WP_149566985.1\|677785_678577_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_149566986.1\|678576_679365_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_149566987.1\|679435_680059_-	hypothetical protein	NA	NA	NA	NA
WP_149566988.1\|680058_680499_-	hypothetical protein	NA	NA	NA	NA
WP_149566989.1\|680498_681842_-	FliI/YscN family ATPase	NA	NA	NA	NA
WP_149566990.1\|681828_682776_-	flagellar assembly protein FliH	NA	NA	NA	NA
WP_149566991.1\|682787_683813_-	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_149566992.1\|683820_685524_-	flagellar M-ring protein FliF	NA	NA	NA	NA
WP_149566993.1\|685570_685912_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_149566994.1\|685918_686377_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_149566995.1\|686390_686807_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_149566996.1\|686869_688243_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	1.3e-40	28.7
WP_149566997.1\|688243_688774_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_149569569.1\|688791_689544_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	9.9e-27	31.6
698606:698622	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1134235 : 1182138

Leptospira_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149567391.1\|1134235_1135393_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_149567392.1\|1135725_1136181_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_149567393.1\|1136086_1136611_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.3e-22	39.9
WP_149567394.1\|1136796_1138635_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_149567395.1\|1138638_1139031_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.3e-09	32.7
WP_149566823.1\|1139066_1140635_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.5e-101	38.8
WP_149566822.1\|1140676_1141024_-	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	1.1e-17	51.9
WP_149566821.1\|1141023_1141329_-	hypothetical protein	NA	NA	NA	NA
WP_149567396.1\|1141394_1141793_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_149567397.1\|1142012_1143554_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_149567398.1\|1144045_1146160_-	radical SAM peptide maturase, CXXX-repeat target family	NA	NA	NA	NA
WP_149567399.1\|1146174_1146708_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_149567400.1\|1146751_1148281_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	5.6e-101	39.1
WP_149567401.1\|1148324_1148672_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.4e-30	50.4
WP_149567402.1\|1148671_1148965_-	hypothetical protein	NA	NA	NA	NA
WP_149567403.1\|1149006_1150209_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_149567404.1\|1150187_1150463_-	hypothetical protein	NA	NA	NA	NA
WP_149566823.1\|1151078_1152647_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.5e-101	38.8
WP_149566822.1\|1152688_1153036_-	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	1.1e-17	51.9
WP_149566821.1\|1153035_1153341_-	hypothetical protein	NA	NA	NA	NA
WP_149567405.1\|1153473_1153752_+	hypothetical protein	NA	NA	NA	NA
WP_149567406.1\|1153771_1154581_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_149567407.1\|1154777_1154978_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.9e-09	44.3
WP_149567408.1\|1155087_1155456_-	hypothetical protein	NA	NA	NA	NA
WP_149567409.1\|1155634_1156717_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_149567410.1\|1156717_1158253_+	glycerol kinase	NA	NA	NA	NA
WP_149567411.1\|1158297_1158837_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_149567412.1\|1158955_1160065_-	response regulator	NA	NA	NA	NA
WP_149567413.1\|1160090_1161032_-	hypothetical protein	NA	NA	NA	NA
WP_149567414.1\|1161078_1161894_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_149567415.1\|1161886_1162723_-	hypothetical protein	NA	NA	NA	NA
WP_149567416.1\|1162785_1163001_-	hypothetical protein	NA	NA	NA	NA
WP_149567417.1\|1162993_1164712_-	aminotransferase class V-fold PLP-dependent enzyme	A0A1V0SDD5	Indivirus	2.5e-49	29.4
WP_149567418.1\|1164773_1165910_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_149567419.1\|1165902_1167060_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_149567420.1\|1167115_1168861_-	ferredoxin	NA	NA	NA	NA
WP_149567421.1\|1168878_1170669_-	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_149567422.1\|1170671_1171070_-	(2Fe-2S) ferredoxin domain-containing protein	NA	NA	NA	NA
WP_149567423.1\|1171081_1171603_-	sensor histidine kinase	NA	NA	NA	NA
WP_149567424.1\|1171623_1172103_-	NAD(P)H-dependent oxidoreductase subunit E	NA	NA	NA	NA
WP_149569581.1\|1172271_1172883_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_149567425.1\|1172885_1173800_+	CBS domain-containing protein	NA	NA	NA	NA
WP_149567426.1\|1173796_1174123_+	iron-sulfur binding hydrogenase	NA	NA	NA	NA
WP_149567427.1\|1174122_1174830_+	PHP domain-containing protein	NA	NA	NA	NA
WP_149567428.1\|1174875_1176228_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	1.4e-18	25.0
WP_149567429.1\|1176230_1176923_+	response regulator	W8CYM9	Bacillus_phage	2.0e-34	37.6
WP_149567430.1\|1176919_1177195_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_149567431.1\|1177295_1178651_+	MATE family efflux transporter	NA	NA	NA	NA
WP_149567432.1\|1178697_1179753_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_149567433.1\|1179796_1180123_-	thioredoxin family protein	NA	NA	NA	NA
WP_149567434.1\|1180242_1181001_+	hypothetical protein	NA	NA	NA	NA
WP_149567435.1\|1181168_1181645_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_149567436.1\|1181886_1182138_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1643022 : 1656256

Staphylococcus_phage(40.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149567786.1\|1643022_1644798_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	9.3e-07	25.9
WP_149567787.1\|1644830_1645781_-	iron-sulfur cluster assembly scaffold protein NifU	A0A2H4N7M4	Lake_Baikal_phage	1.4e-17	39.8
WP_149567788.1\|1645782_1646964_-	cysteine desulfurase, NifS family	A0A0H3TPH2	Faustovirus	5.2e-38	29.7
WP_149567789.1\|1647108_1648884_+\|tRNA	aspartate--tRNA ligase	A0A2I2L4Y8	Orpheovirus	8.4e-16	30.7
WP_149567619.1\|1649037_1650621_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.1e-46	28.6
WP_149567790.1\|1650818_1651280_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.3e-40	54.7
WP_149567791.1\|1651282_1652470_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.4e-98	49.0
WP_149567792.1\|1652471_1653095_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.7e-36	40.0
WP_149567793.1\|1653079_1654165_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	7.6e-44	34.6
WP_149567794.1\|1654667_1655618_+	hypothetical protein	NA	NA	NA	NA
WP_149567795.1\|1655617_1656256_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	9.7e-07	41.7

DBSCAN-SWA_5

2831103 : 2883931

Wolbachia_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149568826.1\|2831103_2831979_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	A0A1B2LRR6	Wolbachia_phage	1.1e-29	35.2
WP_149568827.1\|2831980_2835091_+	DEAD/DEAH box helicase family protein	S5NA49	Choristoneura_rosaceana_nucleopolyhedrovirus	2.0e-44	29.7
WP_149568828.1\|2835136_2835427_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_149568829.1\|2835423_2835900_+	hypothetical protein	NA	NA	NA	NA
WP_149568830.1\|2836066_2837587_+	AAA family ATPase	NA	NA	NA	NA
WP_149568831.1\|2837793_2839002_+	AAA family ATPase	NA	NA	NA	NA
WP_149568832.1\|2839065_2839578_+	DUF4143 domain-containing protein	NA	NA	NA	NA
WP_149569617.1\|2839663_2840095_+	AAA family ATPase	NA	NA	NA	NA
WP_149568833.1\|2839994_2840336_+	ATP-binding protein	NA	NA	NA	NA
WP_149568834.1\|2840372_2840612_-	hypothetical protein	NA	NA	NA	NA
WP_149568835.1\|2841425_2841674_+	hypothetical protein	NA	NA	NA	NA
WP_149568836.1\|2841955_2842768_+	hypothetical protein	NA	NA	NA	NA
WP_149568837.1\|2842757_2843027_+	hypothetical protein	NA	NA	NA	NA
WP_149568838.1\|2843145_2844666_+	AAA family ATPase	NA	NA	NA	NA
WP_149568839.1\|2845014_2846490_-	hypothetical protein	NA	NA	NA	NA
WP_149569618.1\|2846489_2847227_-	hypothetical protein	NA	NA	NA	NA
WP_149568840.1\|2847775_2848270_+	hypothetical protein	NA	NA	NA	NA
WP_149568841.1\|2848873_2849071_+	hypothetical protein	NA	NA	NA	NA
WP_149568842.1\|2849573_2849813_+	hypothetical protein	NA	NA	NA	NA
WP_149568843.1\|2849799_2850174_+	PIN domain-containing protein	NA	NA	NA	NA
WP_149569619.1\|2850266_2850416_+	DUF4433 domain-containing protein	NA	NA	NA	NA
WP_149569620.1\|2850417_2851056_+	macro domain-containing protein	A0A1B2IB65	Erwinia_phage	1.5e-12	33.9
WP_149568844.1\|2851355_2852285_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_149568845.1\|2852497_2852836_+	hypothetical protein	NA	NA	NA	NA
WP_149568846.1\|2853112_2853649_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_149568847.1\|2854550_2855273_+	glycosyltransferase	NA	NA	NA	NA
WP_149568848.1\|2855269_2855710_+	glycosyltransferase	NA	NA	NA	NA
WP_149568849.1\|2855706_2857113_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_149568850.1\|2857105_2858344_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_149568851.1\|2858343_2858694_+	hypothetical protein	NA	NA	NA	NA
WP_149568852.1\|2858732_2859032_+	hypothetical protein	NA	NA	NA	NA
WP_149568853.1\|2858965_2859610_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_149568854.1\|2859584_2860412_+	glycosyltransferase	NA	NA	NA	NA
WP_149568855.1\|2860421_2861447_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	4.8e-40	37.6
WP_149568856.1\|2861446_2862556_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_149568857.1\|2862557_2863715_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	9.4e-101	50.8
WP_149568858.1\|2863776_2864865_+	glycosyltransferase	NA	NA	NA	NA
WP_149568859.1\|2864865_2865747_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.5e-101	62.1
WP_149568860.1\|2865736_2866288_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.5e-43	53.6
WP_149568861.1\|2866287_2867127_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_149568862.1\|2867126_2868341_+	NAD-dependent epimerase/dehydratase family protein	A0A1D8EQC0	Escherichia_phage	4.2e-67	38.7
WP_149568863.1\|2868351_2869452_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_149568864.1\|2869444_2870755_+	nucleotide sugar dehydrogenase	A7IWZ0	Paramecium_bursaria_Chlorella_virus	3.0e-39	30.1
WP_149568865.1\|2870754_2871828_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAI1	Catovirus	6.5e-56	35.9
WP_149568866.1\|2871809_2872898_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_149568867.1\|2872887_2873451_+	N-acetyltransferase	NA	NA	NA	NA
WP_149568868.1\|2873652_2873949_+	cupin domain-containing protein	A0A1V0SH58	Hokovirus	2.4e-16	47.6
WP_149568869.1\|2874149_2874287_+	hypothetical protein	NA	NA	NA	NA
WP_149568870.1\|2874276_2875305_+	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	1.6e-88	54.3
WP_149568871.1\|2875420_2876308_+	cupin domain-containing protein	A0A1V0SH58	Hokovirus	3.2e-24	30.8
WP_149568872.1\|2876496_2876778_+	nucleotidyltransferase	NA	NA	NA	NA
WP_149568873.1\|2876770_2877145_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_149568874.1\|2877223_2877703_+	hypothetical protein	NA	NA	NA	NA
WP_149568875.1\|2877879_2878734_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	E9P639	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	1.2e-31	31.6
WP_149568876.1\|2879485_2880124_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	A0A1B2LRR6	Wolbachia_phage	2.9e-27	36.7
WP_149568877.1\|2880250_2881297_+	hypothetical protein	NA	NA	NA	NA
WP_149568878.1\|2881718_2881907_+	hypothetical protein	NA	NA	NA	NA
WP_149568879.1\|2881896_2882142_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_149568880.1\|2882252_2883083_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_149568881.1\|2883631_2883931_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

3534231 : 3598475

uncultured_Mediterranean_phage(20.0%)

integrase,transposase,protease,tRNA

attL 3542393:3542409|attR 3593508:3593524

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149569437.1\|3534231_3534591_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_149569438.1\|3534565_3534820_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_149569439.1\|3534831_3535818_+	GTPase ObgE	NA	NA	NA	NA
WP_149569440.1\|3535814_3536396_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA
WP_149569441.1\|3536364_3536949_+	HD domain-containing protein	NA	NA	NA	NA
WP_149569442.1\|3536935_3538114_+	LytR family transcriptional regulator	NA	NA	NA	NA
WP_149569443.1\|3538094_3538460_+	ribosome silencing factor	NA	NA	NA	NA
WP_149569444.1\|3538432_3538717_-	hypothetical protein	NA	NA	NA	NA
WP_149569445.1\|3538790_3539267_-	chemotaxis protein CheX	NA	NA	NA	NA
WP_149569446.1\|3539535_3540444_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_149569447.1\|3540631_3541732_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_149569448.1\|3541747_3542491_-	hypothetical protein	NA	NA	NA	NA
3542393:3542409	attL	NA	NA	NA	NA
WP_149569449.1\|3542625_3543966_+	hypothetical protein	NA	NA	NA	NA
WP_149569450.1\|3543965_3559823_+	hypothetical protein	NA	NA	NA	NA
WP_149569451.1\|3560127_3561018_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_149569452.1\|3561040_3561319_+	septation regulator SpoVG	NA	NA	NA	NA
WP_149569453.1\|3561463_3562054_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_149569454.1\|3562055_3562628_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_149569455.1\|3562605_3563604_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_149569456.1\|3563648_3564974_+	hypothetical protein	NA	NA	NA	NA
WP_149569457.1\|3564970_3566698_+	PDZ domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	7.4e-17	27.0
WP_149569458.1\|3566750_3568559_+	elongation factor 4	A0A2K9L6L3	Tupanvirus	3.2e-23	44.0
WP_149569459.1\|3568631_3568871_+	cold shock domain-containing protein	Q9AZD3	Lactococcus_phage	4.1e-11	52.3
WP_149569460.1\|3568887_3569172_-	hypothetical protein	NA	NA	NA	NA
WP_149569461.1\|3569244_3569805_+	3'-5' exonuclease	A0A0A7RWA3	Clostridium_phage	9.3e-22	37.1
WP_149569462.1\|3569807_3570251_+	ribonuclease HI	M4QS60	Ostreococcus_lucimarinus_virus	2.7e-40	58.3
WP_149569463.1\|3570310_3571642_+	HDIG domain-containing protein	NA	NA	NA	NA
WP_149569464.1\|3571641_3572091_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_149569465.1\|3572161_3573508_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_149569466.1\|3573508_3574624_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.2e-73	41.1
WP_149569467.1\|3574635_3575724_-	LptF/LptG family permease	NA	NA	NA	NA
WP_149569468.1\|3575723_3576992_-	LptF/LptG family permease	NA	NA	NA	NA
WP_149569469.1\|3576992_3578009_-	hypothetical protein	NA	NA	NA	NA
WP_149569470.1\|3577989_3578418_-	dUTP diphosphatase	F2WL28	Lausannevirus	6.0e-37	62.2
WP_149569471.1\|3578461_3580603_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_149569472.1\|3580620_3580887_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_149569473.1\|3581103_3581778_+	orotate phosphoribosyltransferase	NA	NA	NA	NA
WP_149569474.1\|3581976_3582501_+	hypothetical protein	NA	NA	NA	NA
WP_149569475.1\|3582497_3583541_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_149569476.1\|3583723_3585016_+	MATE family efflux transporter	NA	NA	NA	NA
WP_149569477.1\|3586006_3586888_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_149569478.1\|3587305_3588412_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_149569479.1\|3588626_3588914_-	hypothetical protein	NA	NA	NA	NA
WP_149569480.1\|3588910_3589774_-	hypothetical protein	NA	NA	NA	NA
WP_149569481.1\|3590114_3590861_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	5.1e-15	32.5
WP_149569641.1\|3590830_3591001_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_149569482.1\|3591002_3592106_+\|transposase	transposase	NA	NA	NA	NA
WP_149569483.1\|3592512_3593118_-	hypothetical protein	NA	NA	NA	NA
WP_149569484.1\|3593118_3593496_-	hypothetical protein	NA	NA	NA	NA
WP_149569485.1\|3593489_3594194_-	hypothetical protein	NA	NA	NA	NA
3593508:3593524	attR	NA	NA	NA	NA
WP_149569486.1\|3594550_3594811_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_149569487.1\|3594810_3595053_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_149569488.1\|3595761_3596154_-	hypothetical protein	NA	NA	NA	NA
WP_149566821.1\|3596212_3596518_+	hypothetical protein	NA	NA	NA	NA
WP_149566822.1\|3596517_3596865_+	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	1.1e-17	51.9
WP_149566823.1\|3596906_3598475_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.5e-101	38.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP035808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP035807

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection