CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043478	Escherichia coli strain ST130 chromosome, complete genome	4 crisprs	DEDDh,DinG,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	0	10	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043478_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043478_1

1247256-1247352

Orphan

Consensus_repeat	Method
GCTTGACGCGTCTTATCAGGCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043478_1

>merge|NZ_CP043478|1|1247256-1247352|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAA

>NZ_CP043478|1|1|1247256-1247352|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAA	CCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGAT
GCTTGACGCATCTTATCAGGCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043478.1\|WP_001143552.1\|1251921_1252443_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP043478.1\|WP_001297443.1\|1239946_1241182_-\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP043478.1\|WP_000212252.1\|1249107_1249830_-\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP043478.1\|WP_001369891.1\|1254111_1254654_+\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_CP043478.1\|WP_000495365.1\|1244246_1245506_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP043478.1\|WP_000988366.1\|1254873_1255566_+\|type-1-fimbria-chaperone-FimC	unknown	unknown	gnl\|CDD\|185117
NZ_CP043478.1\|WP_000006887.1\|1235135_1236497_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_CP043478.1\|WP_000912345.1\|1250500_1251886_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP043478.1\|WP_000855386.1\|1246328_1247222_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP043478.1\|WP_000190288.1\|1252550_1252763_-\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP043478.1\|WP_000729154.1\|1252764_1253631_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP043478.1\|WP_000703894.1\|1241203_1242253_-\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_CP043478.1\|WP_001297445.1\|1245516_1246332_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP043478.1\|WP_000580875.1\|1242569_1244237_+\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP043478.1\|WP_001297442.1\|1236553_1237855_+\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP043478.1\|WP_001295318.1\|1248480_1248990_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP043478.1\|WP_000540996.1\|1239150_1239936_-\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
NZ_CP043478.1\|WP_000815522.1\|1247416_1248484_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP043478.1\|WP_000706355.1\|1237876_1239022_+\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
NZ_CP043478.1\|WP_000255997.1\|1249832_1250327_-\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734

Protein	Function_ID	Function_description	E-value
NZ_CP043478.1\|WP_001143552.1\|1251921_1252443_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.06651e-30
NZ_CP043478.1\|WP_001297443.1\|1239946_1241182_-\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP043478.1\|WP_000212252.1\|1249107_1249830_-\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.37025e-165
NZ_CP043478.1\|WP_001369891.1\|1254111_1254654_+\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	2.45834e-91
NZ_CP043478.1\|WP_000495365.1\|1244246_1245506_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
NZ_CP043478.1\|WP_000988366.1\|1254873_1255566_+\|type-1-fimbria-chaperone-FimC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	5.84958e-149
NZ_CP043478.1\|WP_000006887.1\|1235135_1236497_+\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_CP043478.1\|WP_000912345.1\|1250500_1251886_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP043478.1\|WP_000855386.1\|1246328_1247222_+\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP043478.1\|WP_000190288.1\|1252550_1252763_-\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP043478.1\|WP_000729154.1\|1252764_1253631_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP043478.1\|WP_000703894.1\|1241203_1242253_-\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_CP043478.1\|WP_001297445.1\|1245516_1246332_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.68465e-37
NZ_CP043478.1\|WP_000580875.1\|1242569_1244237_+\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_CP043478.1\|WP_001297442.1\|1236553_1237855_+\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP043478.1\|WP_001295318.1\|1248480_1248990_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP043478.1\|WP_000540996.1\|1239150_1239936_-\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	4.3298e-152
NZ_CP043478.1\|WP_000815522.1\|1247416_1248484_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	1.21739e-179
NZ_CP043478.1\|WP_000706355.1\|1237876_1239022_+\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
NZ_CP043478.1\|WP_000255997.1\|1249832_1250327_-\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121

>NZ_CP043478.1|WP_000855386.1|1246328_1247222_+|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEDTLAGEAGTCISL
>NZ_CP043478.1|WP_001297445.1|1245516_1246332_+|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLTAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP043478.1|WP_000495365.1|1244246_1245506_+|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP043478.1|WP_000580875.1|1242569_1244237_+|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQSLTQVRRWDSACQKLSDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAITPASSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_CP043478.1|WP_000703894.1|1241203_1242253_-|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_CP043478.1|WP_001297443.1|1239946_1241182_-|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPTGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVILSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPHPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP043478.1|WP_000540996.1|1239150_1239936_-|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP043478.1|WP_000706355.1|1237876_1239022_+|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_CP043478.1|WP_001297442.1|1236553_1237855_+|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTVLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP043478.1|WP_000006887.1|1235135_1236497_+|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDALGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>NZ_CP043478.1|WP_000815522.1|1247416_1248484_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP043478.1|WP_001295318.1|1248480_1248990_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP043478.1|WP_000212252.1|1249107_1249830_-|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP043478.1|WP_000255997.1|1249832_1250327_-|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP043478.1|WP_000912345.1|1250500_1251886_+|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP043478.1|WP_001143552.1|1251921_1252443_-|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMVLMGMLWWRRR
>NZ_CP043478.1|WP_000190288.1|1252550_1252763_-|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP043478.1|WP_000729154.1|1252764_1253631_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP043478.1|WP_001369891.1|1254111_1254654_+|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIKLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP043478.1|WP_000988366.1|1254873_1255566_+|type-1-fimbria-chaperone-FimC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

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Crispr_ID: NZ_CP043478_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043478_2

1880430-1880521

Orphan

Consensus_repeat	Method
GCATCAGAAGCAGGTAAAAAAGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043478_2

>merge|NZ_CP043478|2|1880430-1880521|CRISPRCasFinder
GCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGG

>NZ_CP043478|2|2|1880430-1880521|CRISPRCasFinder
GCATCAGAAGCAGGTAAAAAAGGTGG	ACAGCACAGCGGGGGGAATTTCAAGAATGACCCGCAGCGC
GCATCTGAAGCAGGTAAAAAAGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043478.1\|WP_000979516.1\|1891060_1891270_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043478.1\|WP_001044263.1\|1877882_1879124_+\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP043478.1\|WP_000191700.1\|1886365_1887004_+\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP043478.1\|WP_096844411.1\|1880634_1881963_-\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP043478.1\|WP_000535359.1\|1876334_1877594_+\|YccE-family-protein	unknown	unknown	gnl\|CDD\|182074
NZ_CP043478.1\|WP_001297176.1\|1884986_1886078_-\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP043478.1\|WP_001120112.1\|1869620_1870313_-\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP043478.1\|WP_001151437.1\|1879409_1880006_-\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP043478.1\|WP_000420629.1\|1875154_1876075_-\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP043478.1\|WP_001307099.1\|1883088_1883889_-\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP043478.1\|WP_001028095.1\|1881983_1882478_-\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP043478.1\|WP_001001196.1\|1882488_1883079_-\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP043478.1\|WP_001299828.1\|1887043_1891006_-\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP043478.1\|WP_001307708.1\|1884294_1884987_-\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP043478.1\|WP_001143120.1\|1879161_1879389_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP043478.1\|WP_000024561.1\|1874849_1875155_-\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP043478.1\|WP_149508913.1\|1874157_1874757_+\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP043478.1\|WP_001230242.1\|1870442_1871615_+\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP043478.1\|WP_001062102.1\|1871614_1874161_+\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP043478.1\|WP_001126780.1\|1883896_1884283_-\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677

Protein	Function_ID	Function_description	E-value
NZ_CP043478.1\|WP_001044263.1\|1877882_1879124_+\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP043478.1\|WP_000191700.1\|1886365_1887004_+\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.12845e-153
NZ_CP043478.1\|WP_096844411.1\|1880634_1881963_-\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP043478.1\|WP_000535359.1\|1876334_1877594_+\|YccE-family-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0
NZ_CP043478.1\|WP_001297176.1\|1884986_1886078_-\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP043478.1\|WP_001120112.1\|1869620_1870313_-\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	5.89892e-138
NZ_CP043478.1\|WP_001151437.1\|1879409_1880006_-\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP043478.1\|WP_000420629.1\|1875154_1876075_-\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP043478.1\|WP_001307099.1\|1883088_1883889_-\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	1.96403e-140
NZ_CP043478.1\|WP_001028095.1\|1881983_1882478_-\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_CP043478.1\|WP_001001196.1\|1882488_1883079_-\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.45614e-128
NZ_CP043478.1\|WP_001299828.1\|1887043_1891006_-\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP043478.1\|WP_001307708.1\|1884294_1884987_-\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	5.84226e-169
NZ_CP043478.1\|WP_001143120.1\|1879161_1879389_-\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP043478.1\|WP_000024561.1\|1874849_1875155_-\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	2.74017e-64
NZ_CP043478.1\|WP_149508913.1\|1874157_1874757_+\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.52058e-83
NZ_CP043478.1\|WP_001230242.1\|1870442_1871615_+\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP043478.1\|WP_001062102.1\|1871614_1874161_+\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP043478.1\|WP_001126780.1\|1883896_1884283_-\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85

>NZ_CP043478.1|WP_001151437.1|1879409_1880006_-|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP043478.1|WP_001143120.1|1879161_1879389_-|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP043478.1|WP_001044263.1|1877882_1879124_+|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGIVLIASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>NZ_CP043478.1|WP_000535359.1|1876334_1877594_+|YccE-family-protein
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRTLRTNDTQIYSGVSGGITYTIQYVQNVDIVRVSLPGRGSESITDFKGYYWYGFMEYIENITACDDVFSEYCLDDENMSIQPEWINTPGISDLDTGIDLSGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLREDVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKVRLVLDTDPEQRVNEVKNFLTALSDSICSLFIVNSNMASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAIY
>NZ_CP043478.1|WP_000420629.1|1875154_1876075_-|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHSDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP043478.1|WP_000024561.1|1874849_1875155_-|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVTHP
>NZ_CP043478.1|WP_149508913.1|1874157_1874757_+|molecular-chaperone-TorD
MTTLTAQQIACIYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNALENRIAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTDPARRIDSLRQKTLTALWQWLPEFVARCHQHDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP043478.1|WP_001062102.1|1871614_1874161_+|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP043478.1|WP_001230242.1|1870442_1871615_+|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP043478.1|WP_001120112.1|1869620_1870313_-|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP043478.1|WP_096844411.1|1880634_1881963_-|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPYERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMAPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP043478.1|WP_001028095.1|1881983_1882478_-|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP043478.1|WP_001001196.1|1882488_1883079_-|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTVEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL
>NZ_CP043478.1|WP_001307099.1|1883088_1883889_-|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP043478.1|WP_001126780.1|1883896_1884283_-|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP043478.1|WP_001307708.1|1884294_1884987_-|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>NZ_CP043478.1|WP_001297176.1|1884986_1886078_-|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP043478.1|WP_000191700.1|1886365_1887004_+|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
>NZ_CP043478.1|WP_001299828.1|1887043_1891006_-|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP043478.1|WP_000979516.1|1891060_1891270_+|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH

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Crispr_ID: NZ_CP043478_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043478_3

3837388-3837540

TypeI-E

I-E

Consensus_repeat	Method
CCCGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

2 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP043478_3

>merge|NZ_CP043478|3|3837388-3837540|PILER-CR,CRISPRCasFinder
CCCGGTTTATCCCCGCTGGCGCGGGGAACACTTCATGAAGCACGCTGGAATTTATATTTGCCCCGGTTTATCCCCGCTGGCGCGGGGAACACGGGTTGTGCGCCCTGGTGGGCGAAAACGGTGGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP043478|3|1|3837388-3837540|PILER-CR
CCCGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATGAAGCACGCTGGAATTTATATTTGC
CCCGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGTTGTGCGCCCTGGTGGGCGAAAACGGT
GGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP043478|3|3|3837390-3837540|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATGAAGCACGCTGGAATTTATATTTGCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGTTGTGCGCCCTGGTGGGCGAAAACGGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043478.1\|WP_000568943.1\|3829943_3830993_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP043478.1\|WP_000063176.1\|3837636_3837930_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP043478.1\|WP_001246104.1\|3832702_3833026_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP043478.1\|WP_001295182.1\|3829201_3829963_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP043478.1\|WP_001173673.1\|3833075_3833681_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP043478.1\|WP_000246136.1\|3831468_3832179_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP043478.1\|WP_000144848.1\|3837926_3838850_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP043478.1\|WP_000372108.1\|3835109_3836018_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP043478.1\|WP_000281423.1\|3838846_3839497_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP043478.1\|WP_000206429.1\|3840235_3841291_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP043478.1\|WP_000490440.1\|3836269_3837307_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP043478.1\|WP_000029315.1\|3841305_3841842_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043478.1\|WP_000085053.1\|3839478_3840225_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP043478.1\|WP_000956458.1\|3846391_3846544_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP043478.1\|WP_001084076.1\|3841838_3843401_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP043478.1\|WP_001219242.1\|3830989_3831469_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP043478.1\|WP_001233938.1\|3843498_3846198_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP043478.1\|WP_001090346.1\|3833680_3835108_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP043478.1\|WP_000517476.1\|3832197_3832509_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP043478.1\|WP_000039843.1\|3846808_3847543_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997

Protein	Function_ID	Function_description	E-value
NZ_CP043478.1\|WP_000568943.1\|3829943_3830993_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP043478.1\|WP_000063176.1\|3837636_3837930_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP043478.1\|WP_001246104.1\|3832702_3833026_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP043478.1\|WP_001295182.1\|3829201_3829963_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP043478.1\|WP_001173673.1\|3833075_3833681_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP043478.1\|WP_000246136.1\|3831468_3832179_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.02844e-120
NZ_CP043478.1\|WP_000144848.1\|3837926_3838850_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.03875e-156
NZ_CP043478.1\|WP_000372108.1\|3835109_3836018_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP043478.1\|WP_000281423.1\|3838846_3839497_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.48092e-91
NZ_CP043478.1\|WP_000206429.1\|3840235_3841291_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.2231e-155
NZ_CP043478.1\|WP_000490440.1\|3836269_3837307_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP043478.1\|WP_000029315.1\|3841305_3841842_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.47989e-27
NZ_CP043478.1\|WP_000085053.1\|3839478_3840225_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.27305e-47
NZ_CP043478.1\|WP_000956458.1\|3846391_3846544_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP043478.1\|WP_001084076.1\|3841838_3843401_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP043478.1\|WP_001219242.1\|3830989_3831469_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP043478.1\|WP_001233938.1\|3843498_3846198_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.43239e-178
NZ_CP043478.1\|WP_001090346.1\|3833680_3835108_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP043478.1\|WP_000517476.1\|3832197_3832509_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP043478.1\|WP_000039843.1\|3846808_3847543_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138

>NZ_CP043478.1|WP_000490440.1|3836269_3837307_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTASDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSQGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRFDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP043478.1|WP_000372108.1|3835109_3836018_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP043478.1|WP_001090346.1|3833680_3835108_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARIDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP043478.1|WP_001173673.1|3833075_3833681_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP043478.1|WP_001246104.1|3832702_3833026_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP043478.1|WP_000517476.1|3832197_3832509_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP043478.1|WP_000246136.1|3831468_3832179_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQIPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP043478.1|WP_001219242.1|3830989_3831469_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP043478.1|WP_000568943.1|3829943_3830993_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP043478.1|WP_001295182.1|3829201_3829963_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP043478.1|WP_000063176.1|3837636_3837930_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP043478.1|WP_000144848.1|3837926_3838850_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVDQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPTIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP043478.1|WP_000281423.1|3838846_3839497_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTAQLLPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFAPELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGRDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP043478.1|WP_000085053.1|3839478_3840225_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTIQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQGGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDHFHDLKVSLPKLQDECWWEGEHDGLVVSKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>NZ_CP043478.1|WP_000206429.1|3840235_3841291_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEDKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLSLLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP043478.1|WP_000029315.1|3841305_3841842_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKDGHKATLRKWHEELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVAANVKAIDERQPFAAQLAAVMSEGRFTCLSAVKTPDDLLRQLRRAVKLLNGSVNLISLADDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP043478.1|WP_001084076.1|3841838_3843401_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQSSFAPKDYRRWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFMQDFEVLMGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCSHCSALALFSLQLNAPSGGKGYRTGIRGGGPMTTLIELQEYQGNQQAPLWRKLWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQDDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHRFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADGLLSKWNKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP043478.1|WP_001233938.1|3843498_3846198_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGQPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQESIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPTSSLSLFHSRFAFSDRQRIETKTLARFGKEGSSQRAGKALISTQVLEQSVDCDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPDEEWFGSAMRNSAYIYPDHGRIWLTQRVLRQQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYTTGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRQWCIEQRQDPEMANVILVTDNESCGYSATEGLIGKVG
>NZ_CP043478.1|WP_000956458.1|3846391_3846544_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP043478.1|WP_000039843.1|3846808_3847543_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP043478_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043478_4

3854303-3854941

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

10 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP043478_4

>merge|NZ_CP043478|4|3854303-3854941|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACTCTTTTGTGCCCTGGCGTTTTGCTGGCTCTCGCGCGGTTTATCCCCGCTGGCGCGGGGAACACTTTGCCGCTGTCAGCATTGCTGGCGCGTAATACGGTTTATCCCCGCTGGCGCGGGGAACACCGTTCCTCGCATTATTTCCCTTTCTTCTTCGACGGTTTATCCCCGCTGGCGCGGGGAACACTCCGCATCGCTCATGCCGATAATCGGGCTCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTCGGCAGAGAATCGTTCGATTGCCCCTACATCGGTTTATCCCCGCTGGCGCGGGGAACACTGAAGGTGCTGAAGAATATCGGATTCAGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGTGTGATTCCAATTGCCGCACGGAACGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACGATAAATCGCTCACGAAGAATAATTCTACCCCCGGTTTATCCCCGCTGGCGCGGGGAACACACCATTACTTCGGTAAAAGCGTGATCAAGAATCGGTTTATCCCCGCTGGCGCGGGGAACACTTACCGAAGTAATGGTCGAAACACAGAATTTTCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP043478|4|4|3854303-3854941|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTGTGCCCTGGCGTTTTGCTGGCTCTCGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGCCGCTGTCAGCATTGCTGGCGCGTAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTCCTCGCATTATTTCCCTTTCTTCTTCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGCATCGCTCATGCCGATAATCGGGCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGCAGAGAATCGTTCGATTGCCCCTACAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAAGGTGCTGAAGAATATCGGATTCAGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTGTGATTCCAATTGCCGCACGGAACGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAATCGCTCACGAAGAATAATTCTACCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCATTACTTCGGTAAAAGCGTGATCAAGAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACCGAAGTAATGGTCGAAACACAGAATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP043478|4|1|3854303-3854941|CRT
TGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTGTGCCCTGGCGTTTTGCTGGCTCTCGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGCCGCTGTCAGCATTGCTGGCGCGTAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTCCTCGCATTATTTCCCTTTCTTCTTCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGCATCGCTCATGCCGATAATCGGGCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGCAGAGAATCGTTCGATTGCCCCTACAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAAGGTGCTGAAGAATATCGGATTCAGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTGTGATTCCAATTGCCGCACGGAACGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAATCGCTCACGAAGAATAATTCTACCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCATTACTTCGGTAAAAGCGTGATCAAGAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACCGAAGTAATGGTCGAAACACAGAATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP043478|4|2|3854364-3854941|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGCCGCTGTCAGCATTGCTGGCGCGTAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTCCTCGCATTATTTCCCTTTCTTCTTCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGCATCGCTCATGCCGATAATCGGGCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGCAGAGAATCGTTCGATTGCCCCTACAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAAGGTGCTGAAGAATATCGGATTCAGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTGTGATTCCAATTGCCGCACGGAACGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAATCGCTCACGAAGAATAATTCTACCCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCATTACTTCGGTAAAAGCGTGATCAAGAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTACCGAAGTAATGGTCGAAACACAGAATTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043478.1\|WP_000581937.1\|3862547_3862796_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP043478.1\|WP_001199982.1\|3855280_3855952_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP043478.1\|WP_001379137.1\|3856124_3856727_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP043478.1\|WP_000254745.1\|3862212_3862548_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP043478.1\|WP_000987944.1\|3851443_3851809_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP043478.1\|WP_000956458.1\|3846391_3846544_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP043478.1\|WP_085947771.1\|3852456_3853619_-\|IS3-like-element-IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP043478.1\|WP_000206429.1\|3840235_3841291_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP043478.1\|WP_001233938.1\|3843498_3846198_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP043478.1\|WP_000210878.1\|3859485_3861123_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP043478.1\|WP_000793004.1\|3856740_3857646_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP043478.1\|WP_000226815.1\|3862873_3865108_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP043478.1\|WP_000029315.1\|3841305_3841842_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043478.1\|WP_000211936.1\|3849328_3851128_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP043478.1\|WP_001084076.1\|3841838_3843401_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP043478.1\|WP_000034929.1\|3857681_3858044_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043478.1\|WP_000039843.1\|3846808_3847543_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP043478.1\|WP_000036723.1\|3858099_3859398_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP043478.1\|WP_001071648.1\|3861350_3862142_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP043478.1\|WP_001290706.1\|3847616_3849329_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
NZ_CP043478.1\|WP_000581937.1\|3862547_3862796_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP043478.1\|WP_001199982.1\|3855280_3855952_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	9.11521e-156
NZ_CP043478.1\|WP_001379137.1\|3856124_3856727_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	1.00218e-77
NZ_CP043478.1\|WP_000254745.1\|3862212_3862548_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
NZ_CP043478.1\|WP_000987944.1\|3851443_3851809_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
NZ_CP043478.1\|WP_000956458.1\|3846391_3846544_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP043478.1\|WP_085947771.1\|3852456_3853619_-\|IS3-like-element-IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.1214e-62
NZ_CP043478.1\|WP_000206429.1\|3840235_3841291_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	8.2231e-155
NZ_CP043478.1\|WP_001233938.1\|3843498_3846198_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.43239e-178
NZ_CP043478.1\|WP_000210878.1\|3859485_3861123_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP043478.1\|WP_000793004.1\|3856740_3857646_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.06471e-80
NZ_CP043478.1\|WP_000226815.1\|3862873_3865108_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP043478.1\|WP_000029315.1\|3841305_3841842_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.47989e-27
NZ_CP043478.1\|WP_000211936.1\|3849328_3851128_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP043478.1\|WP_001084076.1\|3841838_3843401_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP043478.1\|WP_000039843.1\|3846808_3847543_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138
NZ_CP043478.1\|WP_000036723.1\|3858099_3859398_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP043478.1\|WP_001071648.1\|3861350_3862142_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP043478.1\|WP_001290706.1\|3847616_3849329_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>NZ_CP043478.1|WP_085947771.1|3852456_3853619_-|IS3-like-element-IS3-family-transposase
MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILPKGRDILREAPEMKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA
>NZ_CP043478.1|WP_000987944.1|3851443_3851809_+|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>NZ_CP043478.1|WP_000211936.1|3849328_3851128_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLTGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGELRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>NZ_CP043478.1|WP_001290706.1|3847616_3849329_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP043478.1|WP_000039843.1|3846808_3847543_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>NZ_CP043478.1|WP_000956458.1|3846391_3846544_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP043478.1|WP_001233938.1|3843498_3846198_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGQPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQESIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPTSSLSLFHSRFAFSDRQRIETKTLARFGKEGSSQRAGKALISTQVLEQSVDCDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPDEEWFGSAMRNSAYIYPDHGRIWLTQRVLRQQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYTTGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRQWCIEQRQDPEMANVILVTDNESCGYSATEGLIGKVG
>NZ_CP043478.1|WP_001084076.1|3841838_3843401_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQSSFAPKDYRRWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFMQDFEVLMGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCSHCSALALFSLQLNAPSGGKGYRTGIRGGGPMTTLIELQEYQGNQQAPLWRKLWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQDDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHRFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADGLLSKWNKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP043478.1|WP_000029315.1|3841305_3841842_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKDGHKATLRKWHEELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVAANVKAIDERQPFAAQLAAVMSEGRFTCLSAVKTPDDLLRQLRRAVKLLNGSVNLISLADDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP043478.1|WP_000206429.1|3840235_3841291_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEDKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLSLLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP043478.1|WP_001199982.1|3855280_3855952_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGSASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP043478.1|WP_001379137.1|3856124_3856727_+|LemA-family-protein
MLRTFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSNHEKDVLEAVTLARSQANRASSDLQQTPGNEQKLQAWQQAQAQVTRTLGQLTIISERYPELKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPDDVAAVSKAPTIDFSQNASAH
>NZ_CP043478.1|WP_000793004.1|3856740_3857646_+|YgcG-family-protein
MKNLILLLVLICSSAFAVQVPVPEFAKYINDLTGTLTREEVSTLTSQIKTLTQKSHAQLIVLVVETTGDETIEQYATRVFERWQPGHKNLDDGILLVVAWQDHTVHIEIGYGLEGILTDAQSGQIIRNSIIPAFKKGDLAVGLQQGIGDIETRLSENDLVNNTSPDHPLPFSGWWALLVWAIVLTFISARGYVKTLGVICFAAIILAFVLPIAGYSGSWGVLATLLCFATPFLVVAIAFTPFGRKVRDSMRSANRPSRYERSNSASRHSSSSSSSSSSSFNNDNFSGGGGSSGGGGASGRW
>NZ_CP043478.1|WP_000034929.1|3857681_3858044_+|hypothetical-protein
MSKILANHPRLSKFVFGLFGAAGMIWLNKAFQGDELFQLITSLLALDTFVYFCIYSLINPIPEANDFLWDYKVHQRKYSSNISHNDFVSNVRNSRKIVRILILVGITFINVIALLTKLKM
>NZ_CP043478.1|WP_000036723.1|3858099_3859398_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP043478.1|WP_000210878.1|3859485_3861123_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP043478.1|WP_001071648.1|3861350_3862142_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP043478.1|WP_000254745.1|3862212_3862548_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP043478.1|WP_000581937.1|3862547_3862796_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP043478.1|WP_000226815.1|3862873_3865108_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043478_2	2.1\|1880456\|40\|NZ_CP043478\|CRISPRCasFinder	1880456-1880495	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP019314	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence	71972-72003	6	0.812
NZ_CP043478_4	4.9\|3854820\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854820-3854851	32	MG592456	Vibrio phage 1.081.O._10N.286.52.C2, partial genome	219798-219829	6	0.812
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_AP018829	Asticcacaulis excentricus strain M6 plasmid pASEM-1, complete sequence	280104-280133	7	0.767
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	66681-66712	7	0.781
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP020898	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence	46007-46036	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013555	Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence	125777-125806	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	134655-134684	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013587	Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence	68724-68753	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013598	Rhizobium sp. N741 plasmid pRspN741c, complete sequence	103164-103193	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013578	Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence	125386-125415	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013544	Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence	36015-36044	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013566	Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence	125777-125806	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013502	Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence	103085-103114	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013508	Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence	103164-103193	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013519	Rhizobium sp. N113 plasmid pRspN113b, complete sequence	103163-103192	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013572	Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence	125386-125415	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013492	Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence	103161-103190	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013497	Rhizobium sp. N621 plasmid pRspN621b, complete sequence	103161-103190	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP013592	Rhizobium sp. N871 plasmid pRspN871b, complete sequence	103085-103114	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	CP007643	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence	92301-92330	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NC_010996	Rhizobium etli CIAT 652 plasmid pB, complete sequence	100863-100892	8	0.733
NZ_CP043478_3	3.2\|3837480\|30\|NZ_CP043478\|PILER-CR	3837480-3837509	30	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	97250-97279	8	0.733
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NZ_CP038236	Leisingera sp. NJS201 plasmid unnamed2, complete sequence	2813-2844	8	0.75
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	353558-353589	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	223698-223729	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	221508-221539	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP031072	Bacillus mycoides strain BPN401 plasmid pl395, complete sequence	147474-147505	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	374123-374154	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	74049-74080	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	130803-130834	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	195225-195256	8	0.75
NZ_CP043478_4	4.6\|3854637\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854637-3854668	32	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	471476-471507	8	0.75
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP020898	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence	46007-46038	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013555	Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence	125777-125808	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	134655-134686	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013587	Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence	68724-68755	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	166140-166171	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013598	Rhizobium sp. N741 plasmid pRspN741c, complete sequence	103164-103195	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013578	Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence	125386-125417	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013544	Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence	36015-36046	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013566	Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence	125777-125808	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013502	Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence	103085-103116	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013508	Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence	103164-103195	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013519	Rhizobium sp. N113 plasmid pRspN113b, complete sequence	103163-103194	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013572	Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence	125386-125417	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013492	Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence	103161-103192	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013497	Rhizobium sp. N621 plasmid pRspN621b, complete sequence	103161-103192	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP013592	Rhizobium sp. N871 plasmid pRspN871b, complete sequence	103085-103116	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	CP007643	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence	92301-92332	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NC_010996	Rhizobium etli CIAT 652 plasmid pB, complete sequence	100863-100894	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	97248-97279	9	0.719
NZ_CP043478_4	4.1\|3854332\|32\|NZ_CP043478\|CRISPRCasFinder,CRT	3854332-3854363	32	MK249151	Blackfly microvirus SF02 isolate 049, complete genome	1908-1939	9	0.719
NZ_CP043478_4	4.3\|3854454\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854454-3854485	32	NC_017140	Bacillus megaterium WSH-002 plasmid WSH-002_p2, complete sequence	5097-5128	9	0.719
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	1036450-1036481	9	0.719
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1555010-1555041	9	0.719
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	619383-619414	9	0.719
NZ_CP043478_4	4.7\|3854698\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854698-3854729	32	NC_019699	Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence	59399-59430	9	0.719
NZ_CP043478_4	4.7\|3854698\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854698-3854729	32	MK962627	Achromobacter phage vB_AxyS_19-32_Axy06, complete genome	21335-21366	9	0.719
NZ_CP043478_3	3.4\|3837480\|32\|NZ_CP043478\|CRISPRCasFinder	3837480-3837511	32	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	1679246-1679277	10	0.688
NZ_CP043478_4	4.1\|3854332\|32\|NZ_CP043478\|CRISPRCasFinder,CRT	3854332-3854363	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	450688-450719	10	0.688
NZ_CP043478_4	4.2\|3854393\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854393-3854424	32	NZ_CP039902	Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence	33041-33072	10	0.688
NZ_CP043478_4	4.2\|3854393\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854393-3854424	32	NZ_CP039893	Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence	217865-217896	10	0.688
NZ_CP043478_4	4.2\|3854393\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854393-3854424	32	NZ_KY000025	Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence	208000-208031	10	0.688
NZ_CP043478_4	4.2\|3854393\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854393-3854424	32	NZ_KY000029	Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence	208000-208031	10	0.688
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	823434-823465	10	0.688
NZ_CP043478_4	4.4\|3854515\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854515-3854546	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	682589-682620	10	0.688
NZ_CP043478_4	4.7\|3854698\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854698-3854729	32	NZ_KY000056	Agrobacterium vitis strain Tun201 plasmid pTi_Tun201, complete sequence	141208-141239	11	0.656
NZ_CP043478_4	4.7\|3854698\|32\|NZ_CP043478\|CRISPRCasFinder,CRT,PILER-CR	3854698-3854729	32	NZ_KY000060	Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence	186805-186836	11	0.656

1. spacer 2.1|1880456|40|NZ_CP043478|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

acagcacagcggggggaatttcaagaatgacccgcagcgc	CRISPR spacer
acagcacagcgggggtaatttcaagaatgacccgcagcgc	Protospacer
*************** ************************

2. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP019314 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence) position: , mismatch: 6, identity: 0.812

-gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
gagattgt-cgccctgttgggcgagaacggtgc	Protospacer
 .*.**** ******* *******.*******

3. spacer 4.9|3854820|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 6, identity: 0.812

accatt--acttcggtaaaagcgtgatcaagaat	CRISPR spacer
--cgtcgaacttcagtaaaagcgtgatcaacaat	Protospacer
  *.*.  *****.**************** ***

4. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_AP018829 (Asticcacaulis excentricus strain M6 plasmid pASEM-1, complete sequence) position: , mismatch: 7, identity: 0.767

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
gaggttcacgccctgctgggcgaaaacggc	Protospacer
*.* * ..******* *************.

5. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

-gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
gaggacgt-tgccctggtcggcgaagacggtgg	Protospacer
 .** .** .******** ******.*******

6. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

7. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013555 (Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

8. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

9. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013587 (Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

10. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013598 (Rhizobium sp. N741 plasmid pRspN741c, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

11. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013578 (Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

12. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013544 (Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

13. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013566 (Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

14. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013502 (Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

15. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013508 (Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

16. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013519 (Rhizobium sp. N113 plasmid pRspN113b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

17. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013572 (Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

18. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013492 (Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

19. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013497 (Rhizobium sp. N621 plasmid pRspN621b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

20. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP013592 (Rhizobium sp. N871 plasmid pRspN871b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

21. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to CP007643 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

22. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

23. spacer 3.2|3837480|30|NZ_CP043478|PILER-CR matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 8, identity: 0.733

gggttgtgcgccctggtgggcgaaaacggt	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcgga	Protospacer
.   * ****************** .***

24. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038236 (Leisingera sp. NJS201 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
ccggaactgctgatgccgatgatcgggctcga	Protospacer
.* * *..*** ********.**********.

25. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 8, identity: 0.75

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
cacgccgagctcatcccgataatcggggtcga	Protospacer
. ***   ****** ************ ***.

26. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

27. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

28. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

29. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

30. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

31. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

32. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

33. spacer 4.6|3854637|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.75

tgaaggtgctgaagaatatcgga---ttcagaacg	CRISPR spacer
agaaggtgaggaagaatatcggattgtttgga---	Protospacer
 *******  *************   **..**

34. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

35. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013555 (Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

36. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

37. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013587 (Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

38. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
aaggtcaccgccctgatcggcgaaaacggtgc	Protospacer
..* *   *******.* *************

39. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013598 (Rhizobium sp. N741 plasmid pRspN741c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

40. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013578 (Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

41. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013544 (Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

42. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013566 (Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

43. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013502 (Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

44. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013508 (Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

45. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013519 (Rhizobium sp. N113 plasmid pRspN113b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

46. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013572 (Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

47. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013492 (Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

48. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013497 (Rhizobium sp. N621 plasmid pRspN621b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

49. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP013592 (Rhizobium sp. N871 plasmid pRspN871b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

50. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to CP007643 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

51. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

52. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 9, identity: 0.719

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
atcgtctgcgccctggtgggcgaacgcggacg	Protospacer
.   * ****************** .***  *

53. spacer 4.1|3854332|32|NZ_CP043478|CRISPRCasFinder,CRT matches to MK249151 (Blackfly microvirus SF02 isolate 049, complete genome) position: , mismatch: 9, identity: 0.719

ttttgtgccctggcgttttgctggctctcgcg	CRISPR spacer
atttgttccctggcgttttgttgggacatggc	Protospacer
 ***** *************.***  * .*

54. spacer 4.3|3854454|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NC_017140 (Bacillus megaterium WSH-002 plasmid WSH-002_p2, complete sequence) position: , mismatch: 9, identity: 0.719

cgttcctcgcattatttccctttcttcttcga	CRISPR spacer
ccgcgctcgctttgtttccctttcttctccat	Protospacer
*  . ***** **.**************.*.

55. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 9, identity: 0.719

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
tccgtatcgctcatgtcgataatcctaattca	Protospacer
****.**********.********  . *. .

56. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.719

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
agctcgaagcccatgccgatgatcgggctcgc	Protospacer
  * *.  **.*********.**********

57. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 9, identity: 0.719

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
agctcgaagcccatgccgatgatcgggctcgc	Protospacer
  * *.  **.*********.**********

58. spacer 4.7|3854698|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 9, identity: 0.719

tggtgtgattccaattgccgcacggaacgccg	CRISPR spacer
ggctgggattccaattgccgcagggattctct	Protospacer
 * ** **************** *** . .*

59. spacer 4.7|3854698|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to MK962627 (Achromobacter phage vB_AxyS_19-32_Axy06, complete genome) position: , mismatch: 9, identity: 0.719

tggtgtgattccaattgccgcacggaacgccg	CRISPR spacer
acaagggcatccagttgccggacggaacgccg	Protospacer
  . * *  ****.****** ***********

60. spacer 3.4|3837480|32|NZ_CP043478|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gggttgtgcgccctggtgggcgaaaacggtgg	CRISPR spacer
ttccctgccgccctggttggcgaatacggtgg	Protospacer
   ..   ********* ****** *******

61. spacer 4.1|3854332|32|NZ_CP043478|CRISPRCasFinder,CRT matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttttgtgccctggcgttttgctggctctcgcg	CRISPR spacer
accggtgccctggcgctttgcaggctccttcc	Protospacer
 .. ***********.***** *****.. *

62. spacer 4.2|3854393|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039902 (Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

63. spacer 4.2|3854393|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039893 (Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

64. spacer 4.2|3854393|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000025 (Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

65. spacer 4.2|3854393|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000029 (Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence) position: , mismatch: 10, identity: 0.688

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

66. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
tacgcatcgcccatgccgatgatcgccgcaac	Protospacer
* ********.*********.****   . .

67. spacer 4.4|3854515|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.688

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
tacgcatcgcccatgccgatgatcgccgcaac	Protospacer
* ********.*********.****   . .

68. spacer 4.7|3854698|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000056 (Agrobacterium vitis strain Tun201 plasmid pTi_Tun201, complete sequence) position: , mismatch: 11, identity: 0.656

tggtgtgattccaattgccgcacggaacgccg	CRISPR spacer
atccgtgatacgaattgccgcacggaagaaaa	Protospacer
   .***** * *************** .  .

69. spacer 4.7|3854698|32|NZ_CP043478|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000060 (Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence) position: , mismatch: 11, identity: 0.656

tggtgtgattccaattgccgcacggaacgccg	CRISPR spacer
atccgtgatacgaattgccgcacggaagaaaa	Protospacer
   .***** * *************** .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

878342 : 940534

Emiliania_huxleyi_virus(12.5%)

tRNA,transposase,plate,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295561.1\|878342_879695_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240896.1\|879724_882157_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|882278_882764_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139279.1\|882767_883793_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|883897_884353_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|884356_885145_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000139667.1\|885144_886293_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569430.1\|886289_886886_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.0e-26	40.0
WP_001294757.1\|886922_890405_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
WP_000055741.1\|890417_891377_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_001020973.1\|891475_893617_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|893673_894063_+	VOC family protein	NA	NA	NA	NA
WP_000176578.1\|894127_895426_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062312.1\|895474_895735_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|895721_895922_-	YaeP family protein	NA	NA	NA	NA
WP_001185290.1\|896087_896633_+	YaeQ family protein	NA	NA	NA	NA
WP_000635545.1\|896629_897052_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239192.1\|897065_897776_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_077251589.1\|897782_898034_-	hypothetical protein	NA	NA	NA	NA
WP_000399648.1\|898025_899006_+\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_149508869.1\|900086_901805_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094011.1\|901916_902624_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202335.1\|902620_903025_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874224.1\|903142_903958_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294600.1\|903997_904651_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000593994.1\|904643_905675_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001140163.1\|905862_906435_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997010.1\|912195_912999_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	2.4e-39	36.2
WP_000648606.1\|912995_913910_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|914150_914951_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000211690.1\|915028_915799_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644685.1\|915846_917205_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001052720.1\|917276_918032_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001297210.1\|918065_918788_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|918784_919252_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001297205.1\|919316_920048_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
WP_149508870.1\|920588_921374_+	hypothetical protein	NA	NA	NA	NA
WP_001236649.1\|921510_921990_-	hypothetical protein	NA	NA	NA	NA
WP_000908057.1\|921999_922914_-	hypothetical protein	NA	NA	NA	NA
WP_001284199.1\|922957_923440_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_149508871.1\|923463_924816_-	hypothetical protein	NA	NA	NA	NA
WP_122985538.1\|924826_928261_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_001240530.1\|928369_929782_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_000088859.1\|929786_930530_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_149508872.1\|930526_933286_-	type VI secretion system ATPase TssH	A0A1C3S747	Escherichia_phage	1.8e-81	30.4
WP_000343293.1\|933294_934056_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000246416.1\|934060_935392_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001080149.1\|935394_935919_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_001113703.1\|935915_937196_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_000348793.1\|937220_938303_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000393844.1\|938266_940117_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000611742.1\|940120_940534_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_2

1250500 : 1320037

Enterobacteria_phage(53.23%)

terminase,head,tRNA,transposase,tail,capsid,portal,integrase,protease,lysis

attL 1260230:1260289|attR 1310106:1311436

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000912345.1\|1250500_1251886_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143552.1\|1251921_1252443_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|1252550_1252763_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729154.1\|1252764_1253631_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_001369891.1\|1254111_1254654_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_000988366.1\|1254873_1255566_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_149508878.1\|1258217_1259225_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_032197797.1\|1259235_1259751_+	fimbria assembly protein	NA	NA	NA	NA
1260230:1260289	attL	NA	NA	NA	NA
WP_085947917.1\|1260275_1261548_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_000051902.1\|1262056_1263220_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.0e-200	86.6
WP_000446905.1\|1263075_1263447_-	helix-turn-helix domain-containing protein	M1FJ59	Enterobacteria_phage	2.1e-46	81.0
WP_000488407.1\|1263418_1263697_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000763385.1\|1263744_1263963_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_001443983.1\|1264061_1264343_-	hypothetical protein	A0A0P0ZE02	Stx2-converting_phage	7.2e-47	98.9
WP_000548537.1\|1264353_1264545_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
WP_000149544.1\|1264517_1264700_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
WP_000611716.1\|1264696_1265377_-	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	3.0e-131	98.2
WP_000100847.1\|1265373_1266159_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995453.1\|1266164_1266461_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.8e-48	98.0
WP_023143023.1\|1266536_1266827_-	hypothetical protein	K7P6H3	Enterobacteria_phage	4.2e-26	83.6
WP_000858975.1\|1267338_1268028_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_001067458.1\|1268132_1268363_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_001182893.1\|1268432_1268972_+	hypothetical protein	K7PJT7	Enterobacteria_phage	2.2e-60	66.5
WP_001378761.1\|1269058_1269988_+	replication protein	A0A0K2FJ31	Enterobacteria_phage	1.0e-110	67.6
WP_000788786.1\|1269984_1270686_+	Replication protein P	K7P6G2	Enterobacteria_phage	1.3e-129	99.6
WP_000145915.1\|1270682_1270985_+	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
WP_001070442.1\|1271052_1271385_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_032139864.1\|1271476_1271584_+	hypothetical protein	NA	NA	NA	NA
WP_000709069.1\|1271641_1273168_+	recombinase family protein	Q3HQV4	Burkholderia_phage	6.1e-31	27.7
WP_001567061.1\|1273279_1273597_+	hypothetical protein	NA	NA	NA	NA
WP_000068668.1\|1273801_1274731_+	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	3.0e-57	40.0
WP_001309322.1\|1274829_1274931_+	hypothetical protein	NA	NA	NA	NA
WP_001053033.1\|1274927_1275383_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	3.7e-61	67.5
WP_000224919.1\|1275382_1275553_+	NinE family protein	NA	NA	NA	NA
WP_000774488.1\|1275545_1275836_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_001099700.1\|1275832_1276195_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	96.5
WP_000971068.1\|1276191_1276332_+	YlcG family protein	K7PHH3	Enterobacteria_phage	5.5e-08	67.4
WP_001204791.1\|1276417_1276801_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	4.4e-55	83.3
WP_000737266.1\|1276990_1278088_-	porin	Q1MVN1	Enterobacteria_phage	2.2e-155	76.5
WP_000839596.1\|1278676_1278892_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135277.1\|1278891_1279389_+	lysozyme	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_001228695.1\|1279605_1279788_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_000738423.1\|1279878_1280172_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
WP_001415975.1\|1280531_1280726_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	4.3e-27	96.9
WP_032152690.1\|1280741_1280999_-	hypothetical protein	A0A0K2FJC5	Escherichia_phage	2.0e-11	97.1
WP_063082806.1\|1281114_1281660_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.0e-94	98.3
WP_001027283.1\|1281634_1283560_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_000198149.1\|1283556_1283763_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001369921.1\|1283759_1285361_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.9e-309	98.9
WP_000123309.1\|1285341_1286661_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	7.4e-235	99.1
WP_001378764.1\|1286670_1287003_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	4.2e-54	97.3
WP_000063221.1\|1287058_1288084_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.1e-189	97.9
WP_000158880.1\|1288125_1288521_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.2e-57	93.9
WP_000752994.1\|1288532_1288886_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
WP_000975110.1\|1288897_1289476_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.0e-79	97.4
WP_000683142.1\|1289472_1289868_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	2.9e-70	99.2
WP_001378767.1\|1289875_1290616_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.8e-129	97.2
WP_000479193.1\|1290631_1291054_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-60	85.7
WP_000459457.1\|1291035_1291470_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_001774776.1\|1291462_1294042_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.5
WP_000847379.1\|1294038_1294368_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_001152639.1\|1294367_1295066_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
WP_000194783.1\|1295071_1295815_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.2e-146	96.4
WP_000090895.1\|1295751_1296384_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.5e-95	89.5
WP_061091987.1\|1296444_1299858_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	97.6
WP_149508879.1\|1299928_1300528_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	2.8e-109	98.0
WP_000279163.1\|1300592_1303553_+	hypothetical protein	A0A0K2FIZ6	Escherichia_phage	4.0e-55	53.7
WP_000885616.1\|1303552_1304128_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
WP_000086514.1\|1304225_1304816_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	7.3e-25	38.8
WP_000836768.1\|1305132_1305366_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_120795384.1\|1305434_1305548_-	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000239874.1\|1305913_1306582_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937502.1\|1306638_1306944_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
WP_001226378.1\|1307127_1308612_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001201825.1\|1308798_1309752_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_085947917.1\|1310151_1311424_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_149508880.1\|1311600_1312362_-	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA
1310106:1311436	attR	NA	NA	NA	NA
WP_001224569.1\|1312544_1313435_-	DUF4434 family protein	NA	NA	NA	NA
WP_000662376.1\|1313435_1316408_-	bacteriophage adsorption protein NfrA	NA	NA	NA	NA
WP_000383954.1\|1316394_1318632_-	phage adsorption protein NrfB	NA	NA	NA	NA
WP_000394594.1\|1318900_1320037_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1590018 : 1655567

Salmonella_phage(76.09%)

terminase,head,plate,transposase,capsid,tail,portal,integrase,lysis

attL 1581944:1581959|attR 1658644:1658659

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1581944:1581959	attL	NA	NA	NA	NA
WP_000399648.1\|1590018_1590999_+\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_000168779.1\|1591259_1592525_-	DUF1479 domain-containing protein	NA	NA	NA	NA
WP_000114244.1\|1592676_1593492_-	sugar-phosphatase YbiV	NA	NA	NA	NA
WP_000209359.1\|1593637_1596070_-	glycyl radical protein	A0A076YHZ7	Citrobacter_phage	6.1e-09	43.5
WP_001295295.1\|1596075_1596975_-	glycyl-radical enzyme activating protein	NA	NA	NA	NA
WP_000829261.1\|1597946_1598696_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_000397381.1\|1598695_1599931_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_000513775.1\|1600134_1601100_+	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_001315369.1\|1601086_1602958_+	glutathione ABC transporter ATP-binding protein GsiA	G9BWD6	Planktothrix_phage	4.0e-16	29.7
WP_000090136.1\|1602977_1604516_+	glutathione ABC transporter substrate-binding protein GsiB	NA	NA	NA	NA
WP_000936043.1\|1604533_1605454_+	glutathione ABC transporter permease GsiC	NA	NA	NA	NA
WP_001236044.1\|1605456_1606368_+	glutathione ABC transporter permease GsiD	NA	NA	NA	NA
WP_001349442.1\|1606545_1608894_+	EAL domain-containing protein	NA	NA	NA	NA
WP_149508892.1\|1608901_1610230_+	diguanylate cyclase	NA	NA	NA	NA
WP_000049367.1\|1610276_1611602_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_000497137.1\|1611814_1612198_+	biofilm formation regulator BssR	NA	NA	NA	NA
WP_149508893.1\|1612308_1613424_+	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA
WP_001295292.1\|1613420_1614047_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_000195961.1\|1614292_1615495_+	serine-type D-Ala-D-Ala carboxypeptidase	B6DZZ7	Stx2-converting_phage	8.2e-100	48.0
WP_000450133.1\|1615541_1616300_-	DNA-binding transcriptional repressor DeoR	NA	NA	NA	NA
WP_000892317.1\|1616357_1616954_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_001180076.1\|1617238_1618471_+	multidrug efflux MFS transporter MdfA	NA	NA	NA	NA
WP_000480892.1\|1618511_1618796_-	hypothetical protein	NA	NA	NA	NA
WP_001297001.1\|1618881_1619697_-	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase	NA	NA	NA	NA
WP_000217848.1\|1619696_1620905_-	MFS transporter	NA	NA	NA	NA
WP_001297003.1\|1620988_1621525_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000290937.1\|1621629_1622682_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.6e-107	57.3
WP_001513672.1\|1622870_1623062_-	hypothetical protein	A0A0R6PIH8	Moraxella_phage	6.8e-09	65.9
WP_001047320.1\|1623077_1623647_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	2.9e-39	43.9
WP_001247707.1\|1623772_1623994_+	hypothetical protein	NA	NA	NA	NA
WP_000460891.1\|1624026_1624536_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	1.3e-86	98.2
WP_000956182.1\|1624543_1624744_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
WP_001352070.1\|1624707_1625049_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.3e-54	96.5
WP_001244216.1\|1625116_1625350_+	DUF2732 family protein	E5G6L6	Salmonella_phage	9.2e-32	96.1
WP_000752613.1\|1625349_1625577_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	2.7e-36	100.0
WP_000104157.1\|1625573_1626431_+	DNA adenine methylase	E5G6L8	Salmonella_phage	4.1e-162	98.2
WP_059241718.1\|1626427_1628842_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.4
WP_001154434.1\|1628995_1629184_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|1629194_1629428_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_149508894.1\|1629715_1631293_+	hypothetical protein	NA	NA	NA	NA
WP_059241720.1\|1631694_1633434_+	AIPR family protein	NA	NA	NA	NA
WP_059241723.1\|1633466_1634495_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.2e-171	87.0
WP_001098431.1\|1634494_1636261_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_000216238.1\|1636403_1637237_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.2e-123	91.3
WP_000742511.1\|1637253_1638312_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_000059191.1\|1638315_1638966_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_000673523.1\|1639061_1639526_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.4e-77	89.6
WP_000868192.1\|1639525_1639729_+\|tail	tail protein X	E5G6M9	Salmonella_phage	6.8e-31	91.0
WP_000171568.1\|1639732_1639948_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_001442491.1\|1639967_1640441_+	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
WP_059241725.1\|1640442_1640820_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	5.1e-16	40.0
WP_001337513.1\|1640816_1641245_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	2.9e-47	77.3
WP_001177677.1\|1641174_1641378_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.1e-24	77.6
WP_001608130.1\|1641340_1641772_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	8.4e-71	92.3
WP_000829141.1\|1641764_1642211_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-62	84.9
WP_149508895.1\|1642279_1642858_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.6e-93	86.5
WP_000177590.1\|1642854_1643214_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
WP_001608132.1\|1643200_1644109_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	9.2e-144	90.7
WP_001086844.1\|1644101_1644707_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	9.8e-110	92.0
WP_021542073.1\|1644703_1646233_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	3.6e-201	72.5
WP_149508896.1\|1646232_1646835_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	4.6e-99	90.5
WP_021542075.1\|1646806_1647250_-\|tail	phage tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.0e-79	94.6
WP_059241729.1\|1647270_1647681_-	hypothetical protein	A0A0F7LBW5	Escherichia_phage	3.4e-61	91.9
WP_000905031.1\|1647711_1648278_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	2.9e-87	86.8
WP_000046141.1\|1648420_1649593_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	4.6e-204	90.3
WP_001207660.1\|1649602_1650118_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_001281004.1\|1650172_1650475_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	3.7e-41	91.0
WP_000763311.1\|1650489_1650609_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_059241730.1\|1650601_1653679_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	63.0
WP_000980413.1\|1653675_1654161_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.3e-67	80.6
WP_059241733.1\|1654157_1655258_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	6.5e-176	87.7
WP_000972391.1\|1655348_1655567_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
1658644:1658659	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1784419 : 1849494

Escherichia_phage(41.51%)

terminase,tail,portal,integrase,holin,protease,lysis

attL 1799515:1799574|attR 1844760:1844821

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156526.1\|1784419_1786180_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877158.1\|1786365_1786818_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000750419.1\|1786892_1787945_-	porin OmpA	NA	NA	NA	NA
WP_000288710.1\|1788301_1788811_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_000839153.1\|1789029_1789659_+	CRP-S regulon transcriptional coactivator Sxy	NA	NA	NA	NA
WP_000875044.1\|1789621_1791784_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261235.1\|1791793_1792240_-	YccF domain-containing protein	NA	NA	NA	NA
WP_001315388.1\|1792362_1794417_+	DNA helicase IV	A7KV33	Bacillus_phage	7.7e-21	27.9
WP_000424181.1\|1794448_1794907_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847791.1\|1795002_1795665_-	DUF2057 family protein	NA	NA	NA	NA
WP_000665217.1\|1795837_1796251_+	CoA-binding protein	NA	NA	NA	NA
WP_001295356.1\|1796295_1796613_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000116288.1\|1796670_1797861_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000048250.1\|1797955_1798234_+	acylphosphatase	NA	NA	NA	NA
WP_000904442.1\|1798230_1798560_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000375136.1\|1798650_1799310_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	4.0e-48	55.3
1799515:1799574	attL	NA	NA	NA	NA
WP_149508900.1\|1799717_1800737_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	7.5e-86	50.0
WP_000273163.1\|1800705_1800957_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_149508901.1\|1801023_1803459_-	exonuclease	A0A192Y6E0	Salmonella_phage	4.0e-53	54.4
WP_000092786.1\|1803554_1803743_-	DUF1482 family protein	NA	NA	NA	NA
WP_000450222.1\|1803739_1803928_-	cell division inhibitor	NA	NA	NA	NA
WP_028985610.1\|1804451_1804826_-	hypothetical protein	NA	NA	NA	NA
WP_050457572.1\|1804837_1804990_-	DUF1391 family protein	M4QQ57	Salicola_phage	2.5e-06	51.1
WP_028985609.1\|1805256_1805973_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.1e-54	45.0
WP_000471550.1\|1806022_1806238_+	hypothetical protein	NA	NA	NA	NA
WP_000693925.1\|1806234_1806660_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262404.1\|1806728_1807760_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	5.8e-86	70.0
WP_001376360.1\|1807791_1808214_+	replication protein	A0A0U2JGJ0	Escherichia_phage	7.4e-72	90.0
WP_088376919.1\|1808247_1808964_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.5e-72	62.8
WP_097469817.1\|1808996_1809278_+	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
WP_044808599.1\|1809274_1809580_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	2.2e-49	94.1
WP_001289674.1\|1809566_1809878_+	hypothetical protein	A0A222YY67	Escherichia_phage	1.1e-48	83.5
WP_001369935.1\|1809878_1810205_+	hypothetical protein	Q8VNQ2	Enterobacteria_phage	2.0e-24	88.5
WP_000559545.1\|1810140_1810539_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	2.2e-57	96.6
WP_000137950.1\|1810634_1811006_+	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	2.7e-49	78.9
WP_105475137.1\|1811002_1811485_+	hypothetical protein	A0A0N7KZ94	Stx2-converting_phage	2.9e-19	92.0
WP_062863467.1\|1811969_1812182_+	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	4.4e-17	75.7
WP_074015431.1\|1812350_1812623_+	hypothetical protein	I6PCV7	Cronobacter_phage	3.6e-11	50.8
WP_135301135.1\|1812624_1813674_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.5e-110	54.9
WP_000904153.1\|1813686_1814046_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.6e-36	61.7
WP_000640044.1\|1814054_1814615_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.6e-67	69.1
WP_000917768.1\|1814831_1815029_+	hypothetical protein	S5MQK8	Escherichia_phage	6.1e-29	100.0
WP_088888714.1\|1815179_1816238_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.3e-193	92.6
WP_001380362.1\|1816699_1817131_+	tellurite resistance protein	H6WZJ6	Escherichia_phage	1.6e-66	96.5
WP_000216624.1\|1817127_1817292_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	7.4e-12	81.1
WP_149508902.1\|1817795_1819742_+	DUF1737 domain-containing protein	S5MDQ7	Escherichia_phage	0.0e+00	98.5
WP_000142781.1\|1819877_1820057_+	DUF1378 family protein	A0A088CBQ0	Shigella_phage	7.1e-24	93.2
WP_001447570.1\|1820097_1820343_+	DUF826 domain-containing protein	A0A088CE63	Shigella_phage	8.5e-20	82.7
WP_000284506.1\|1820420_1820636_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_047081887.1\|1820639_1821197_+	hypothetical protein	Q08JA0	Stx2-converting_phage	2.1e-50	83.5
WP_149508903.1\|1821233_1821776_+	glycoside hydrolase family protein	S5MQK2	Escherichia_phage	4.5e-98	94.4
WP_149508904.1\|1821763_1822231_+\|lysis	lysis protein	Q9EYC9	Enterobacteria_phage	5.7e-65	86.5
WP_033802784.1\|1822218_1822434_+	hypothetical protein	Q9T1L1	Enterobacteria_phage	1.6e-17	81.1
WP_149508905.1\|1822684_1823161_+	DUF1441 family protein	Q9EYD0	Enterobacteria_phage	2.3e-82	99.4
WP_050878052.1\|1823157_1825281_+\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	0.0e+00	99.9
WP_000102415.1\|1825277_1825490_+	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_000974564.1\|1825489_1826992_+\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
WP_022581877.1\|1826936_1828961_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.7
WP_149508906.1\|1829048_1829375_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	3.1e-49	98.1
WP_001281347.1\|1829367_1829649_+	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	1.3e-45	98.9
WP_047082262.1\|1829651_1830275_+\|tail	tail protein	Q8VNN3	Enterobacteria_phage	7.5e-105	99.0
WP_000682716.1\|1830287_1830686_+\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000235129.1\|1830693_1831443_+\|tail	phage tail protein	S5M7Q5	Escherichia_phage	2.1e-130	94.4
WP_032330778.1\|1831462_1831894_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.5e-40	65.7
WP_047081971.1\|1831920_1832325_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	4.5e-42	77.5
WP_149508907.1\|1832314_1834924_+\|tail	phage tail tape measure protein	S5MBY3	Escherichia_phage	0.0e+00	85.0
WP_000847279.1\|1834920_1835250_+\|tail	phage tail protein	S5MW28	Escherichia_phage	5.6e-59	100.0
WP_032209675.1\|1835249_1835948_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.3e-134	100.0
WP_149508908.1\|1835958_1836702_+\|tail	phage tail protein	S5MQI8	Escherichia_phage	1.7e-148	97.6
WP_149509065.1\|1836647_1837280_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.8e-101	91.0
WP_149508909.1\|1837747_1841224_+	DUF1983 domain-containing protein	Q6H9T2	Enterobacteria_phage	0.0e+00	93.0
WP_149508910.1\|1841291_1841915_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	2.4e-66	59.9
WP_149508911.1\|1842065_1844024_+\|tail	phage tail protein	S5MDN9	Escherichia_phage	9.1e-173	97.8
WP_105475085.1\|1844008_1844353_-	hypothetical protein	NA	NA	NA	NA
WP_105475084.1\|1844291_1844621_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001058323.1\|1845275_1846394_+	hydrogenase 1 small subunit	NA	NA	NA	NA
1844760:1844821	attR	NA	NA	NA	NA
WP_000107384.1\|1846390_1848184_+	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA
WP_001186424.1\|1848202_1848910_+	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_000003671.1\|1848906_1849494_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA

DBSCAN-SWA_5

1995358 : 2065738

Escherichia_phage(50.82%)

terminase,head,tRNA,tail,capsid,portal,integrase,holin,protease,lysis

attL 2023898:2023919|attR 2046155:2046176

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000074972.1\|1995358_1996477_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	1.5e-82	43.6
WP_000003742.1\|1996445_1996715_-	excisionase	NA	NA	NA	NA
WP_137565774.1\|1996776_1999221_-	exonuclease	V5UQJ3	Shigella_phage	1.1e-175	58.1
WP_000092782.1\|1999313_1999502_-	DUF1482 family protein	NA	NA	NA	NA
WP_149508919.1\|1999498_1999687_-	cell division inhibitor	NA	NA	NA	NA
WP_001302137.1\|2000084_2000249_+	hypothetical protein	NA	NA	NA	NA
WP_001171942.1\|2000252_2000471_-	hypothetical protein	NA	NA	NA	NA
WP_000379589.1\|2000630_2000786_-	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_000379972.1\|2000952_2001360_-	helix-turn-helix domain-containing protein	B1B6L9	Salmonella_phage	3.1e-14	58.7
WP_000920571.1\|2001443_2001674_+	dicB transcriptional regulator DicC	NA	NA	NA	NA
WP_000705369.1\|2001657_2002209_+	hypothetical protein	NA	NA	NA	NA
WP_000020570.1\|2002180_2003221_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.8e-90	86.7
WP_001302109.1\|2003252_2003675_+	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	2.2e-76	97.1
WP_149508920.1\|2003709_2004468_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	5.8e-75	64.5
WP_000215514.1\|2004527_2004713_+	hypothetical protein	NA	NA	NA	NA
WP_000211435.1\|2005060_2005609_+	ORF6N domain-containing protein	A0A2R2Z302	Escherichia_phage	1.4e-41	75.4
WP_022581295.1\|2005823_2006036_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	7.6e-17	67.1
WP_000042395.1\|2006138_2006456_-	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001217944.1\|2006448_2006820_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001452497.1\|2007043_2007271_+	hypothetical protein	NA	NA	NA	NA
WP_024199763.1\|2007324_2007594_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.2e-11	52.5
WP_149508921.1\|2007595_2008645_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.2e-109	54.3
WP_149508922.1\|2008657_2009017_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	4.3e-36	61.7
WP_000640044.1\|2009025_2009586_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.6e-67	69.1
WP_000917750.1\|2009803_2010001_+	hypothetical protein	S5MQK8	Escherichia_phage	1.0e-28	98.5
WP_000483502.1\|2010151_2011210_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	2.0e-206	98.9
WP_001365678.1\|2011593_2012553_+	Shiga toxin Stx2a subunit A	A0A0P0ZDQ7	Stx2-converting_phage	3.6e-175	99.7
WP_000738080.1\|2012564_2012834_+	Shiga toxin Stx2c subunit B	Q5TJL5	Enterobacteria_phage	2.1e-43	100.0
WP_071531850.1\|2013090_2013276_-	hypothetical protein	Q8VNP0	Enterobacteria_phage	2.8e-15	92.9
WP_149508923.1\|2013346_2015293_+	DUF1737 domain-containing protein	S5MDQ7	Escherichia_phage	0.0e+00	98.9
WP_001385761.1\|2015428_2015611_+	DUF1378 family protein	S5MBZ5	Escherichia_phage	2.0e-26	100.0
WP_001385760.1\|2015636_2015882_+	DUF826 domain-containing protein	S5MW40	Escherichia_phage	1.9e-19	100.0
WP_000284506.1\|2015958_2016174_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_000087456.1\|2016178_2016712_+	lysozyme	S5MQK2	Escherichia_phage	7.9e-103	100.0
WP_001255340.1\|2016708_2017176_+\|lysis	lysis protein	Q9EYC9	Enterobacteria_phage	4.4e-65	87.2
WP_000373411.1\|2017588_2018065_+	DUF1441 family protein	S5MQK0	Escherichia_phage	1.9e-84	100.0
WP_149508924.1\|2018061_2020185_+\|terminase	phage terminase large subunit family protein	S5MDQ1	Escherichia_phage	0.0e+00	99.9
WP_000102415.1\|2020181_2020394_+	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
WP_000974568.1\|2020393_2021896_+\|portal	phage portal protein	S5MW34	Escherichia_phage	6.3e-291	100.0
WP_149508925.1\|2021840_2023865_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.8
2023898:2023919	attL	NA	NA	NA	NA
WP_001097058.1\|2023952_2024279_+	DUF2190 family protein	S5MQJ5	Escherichia_phage	6.1e-50	100.0
WP_001281344.1\|2024271_2024553_+	hypothetical protein	S5MDP9	Escherichia_phage	7.2e-47	100.0
WP_000974964.1\|2024555_2025182_+	hypothetical protein	S5MBY4	Escherichia_phage	7.8e-102	100.0
WP_000682704.1\|2025191_2025590_+	hypothetical protein	S5MW30	Escherichia_phage	2.7e-71	100.0
WP_149508926.1\|2025597_2026347_+\|tail	phage tail protein	S5M7Q5	Escherichia_phage	3.6e-130	94.4
WP_032330778.1\|2026362_2026794_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.5e-40	65.7
WP_044809160.1\|2026820_2027225_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	9.0e-43	78.4
WP_149508927.1\|2027214_2029821_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.1
WP_000847280.1\|2029817_2030147_+\|tail	phage tail protein	S5MW28	Escherichia_phage	1.2e-58	99.1
WP_149508928.1\|2030146_2030845_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.7e-129	97.0
WP_062867322.1\|2030855_2031599_+\|tail	phage tail protein	S5MQI8	Escherichia_phage	5.0e-148	97.2
WP_122993618.1\|2031544_2032177_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.9e-100	91.0
WP_149508929.1\|2032417_2036104_+	DUF1983 domain-containing protein	S5MW25	Escherichia_phage	0.0e+00	87.9
WP_000078855.1\|2036302_2036443_+	Hok/Gef family protein	S5M7Q0	Escherichia_phage	8.5e-17	93.5
WP_149508930.1\|2036587_2037856_+\|tail	phage tail protein	S5MDN9	Escherichia_phage	1.5e-54	98.2
WP_001049903.1\|2037924_2038596_+	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	3.0e-107	84.8
WP_022581964.1\|2038760_2039090_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_000799399.1\|2039255_2040119_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531601.1\|2040102_2041239_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
WP_000359432.1\|2041488_2042718_+	peptidase T	NA	NA	NA	NA
WP_000456506.1\|2042863_2043985_-	cupin domain-containing protein	NA	NA	NA	NA
WP_000085265.1\|2044233_2045463_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.5e-133	55.9
WP_000953271.1\|2045837_2046026_+	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	5.9e-13	64.2
WP_000182306.1\|2046269_2046473_-	hypothetical protein	NA	NA	NA	NA
2046155:2046176	attR	NA	NA	NA	NA
WP_000103621.1\|2046530_2046710_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	1.5e-10	58.6
WP_000184034.1\|2046930_2047158_-	hypothetical protein	NA	NA	NA	NA
WP_000190551.1\|2047215_2047395_-	hypothetical protein	NA	NA	NA	NA
WP_001442352.1\|2047587_2048145_+	host cell division inhibitor Icd-like protein	Q8SBF3	Shigella_phage	9.0e-17	45.5
WP_000609225.1\|2048137_2048350_+	hypothetical protein	NA	NA	NA	NA
WP_135300960.1\|2048339_2048582_+	hypothetical protein	NA	NA	NA	NA
WP_032308184.1\|2048574_2048808_+	hypothetical protein	NA	NA	NA	NA
WP_001204975.1\|2048800_2049034_+	hypothetical protein	NA	NA	NA	NA
WP_000770163.1\|2049039_2049339_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000833612.1\|2049335_2050733_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.5e-113	49.2
WP_024200918.1\|2050935_2051187_+	hypothetical protein	NA	NA	NA	NA
WP_032317163.1\|2051300_2051498_+	hypothetical protein	NA	NA	NA	NA
WP_136753079.1\|2051507_2051918_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_000233314.1\|2051928_2052177_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_101766855.1\|2052179_2052278_+	trigger factor	NA	NA	NA	NA
WP_001142405.1\|2052318_2052543_+	hypothetical protein	NA	NA	NA	NA
WP_028985258.1\|2052834_2053992_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	4.8e-137	64.9
WP_000504062.1\|2054031_2054604_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	2.7e-61	63.0
WP_021292933.1\|2054641_2055817_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.8e-184	79.9
WP_001020660.1\|2055813_2056152_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.9e-30	52.7
WP_000134113.1\|2056148_2056445_+	hypothetical protein	A0A2H4JD08	uncultured_Caudovirales_phage	4.0e-32	65.3
WP_001145905.1\|2056444_2056885_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.5e-62	72.6
WP_000174068.1\|2056868_2057051_+	hypothetical protein	NA	NA	NA	NA
WP_000113645.1\|2057173_2057530_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	9.4e-52	81.4
WP_032326831.1\|2057513_2059175_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	6.8e-278	81.6
WP_000133415.1\|2059188_2059470_+	hypothetical protein	NA	NA	NA	NA
WP_000735412.1\|2060281_2061742_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|2061741_2062413_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423729.1\|2062580_2063951_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
WP_001297479.1\|2063954_2064596_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_001297484.1\|2064631_2065738_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_6

2170076 : 2239282

Escherichia_phage(29.63%)

terminase,head,capsid,tail,portal,integrase,holin,protease,lysis

attL 2169887:2169914|attR 2225477:2225504

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2169887:2169914	attL	NA	NA	NA	NA
WP_000113693.1\|2170076_2171207_-\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	4.0e-104	51.4
WP_000113183.1\|2171184_2171433_-	excisionase	NA	NA	NA	NA
WP_000034484.1\|2171497_2173969_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.3e-54	56.0
WP_000092839.1\|2174064_2174253_-	DUF1482 family protein	NA	NA	NA	NA
WP_000450222.1\|2174249_2174438_-	cell division inhibitor	NA	NA	NA	NA
WP_038812338.1\|2174986_2175289_+	hypothetical protein	NA	NA	NA	NA
WP_001365839.1\|2175212_2175581_-	hypothetical protein	NA	NA	NA	NA
WP_000380317.1\|2175592_2175745_-	DUF1391 family protein	M4QQ57	Salicola_phage	5.1e-07	53.2
WP_001003380.1\|2175934_2176342_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	5.5e-24	45.4
WP_000476991.1\|2176419_2176647_+	transcriptional regulator	NA	NA	NA	NA
WP_000705131.1\|2176630_2177152_+	hypothetical protein	NA	NA	NA	NA
WP_000054521.1\|2177132_2178110_+	hypothetical protein	U5P0A0	Shigella_phage	3.8e-55	61.2
WP_000790460.1\|2178116_2178857_+	ATP-binding protein	A0A088CBP4	Shigella_phage	4.7e-114	83.1
WP_000450859.1\|2178886_2179648_+	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	5.4e-73	63.6
WP_000215513.1\|2179707_2179902_+	hypothetical protein	NA	NA	NA	NA
WP_000211993.1\|2180243_2180795_+	ORF6N domain-containing protein	A0A0N7C203	Escherichia_phage	5.5e-43	53.3
WP_000882661.1\|2181009_2181222_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	5.6e-28	94.3
WP_000042395.1\|2181324_2181642_-	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001452497.1\|2182230_2182458_+	hypothetical protein	NA	NA	NA	NA
WP_024199763.1\|2182511_2182781_+	hypothetical protein	I6PCV7	Cronobacter_phage	1.2e-11	52.5
WP_050877448.1\|2182782_2183832_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	4.5e-110	54.3
WP_000904164.1\|2183844_2184207_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.4e-34	61.9
WP_001064918.1\|2184199_2184865_+	antiterminator	I6PDF8	Cronobacter_phage	1.6e-60	52.0
WP_000342737.1\|2185118_2185832_+	hypothetical protein	NA	NA	NA	NA
WP_000917733.1\|2186005_2186203_+	hypothetical protein	S5MQK8	Escherichia_phage	6.8e-28	96.9
WP_106889558.1\|2186354_2187413_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	1.5e-206	98.9
WP_000271631.1\|2187893_2188322_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_000382067.1\|2189018_2189744_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024166055.1\|2189833_2190112_+	hypothetical protein	NA	NA	NA	NA
WP_071532096.1\|2190725_2190950_+	hypothetical protein	NA	NA	NA	NA
WP_149508934.1\|2191609_2193574_+	DUF1737 domain-containing protein	A0A0P0ZBH7	Stx2-converting_phage	1.8e-293	78.2
WP_000142780.1\|2193708_2193888_+	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	5.4e-24	93.2
WP_001290208.1\|2193928_2194174_+	DUF826 domain-containing protein	A0A088CE63	Shigella_phage	8.5e-20	100.0
WP_000284510.1\|2194251_2194467_+\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_001378945.1\|2194470_2195139_+	hypothetical protein	Q08JA0	Stx2-converting_phage	3.5e-60	77.4
WP_001063216.1\|2195118_2195439_-	hypothetical protein	NA	NA	NA	NA
WP_000992039.1\|2195564_2196098_+	lysozyme	A0A2R2Z343	Escherichia_phage	3.6e-100	96.6
WP_072024677.1\|2196254_2196437_+	hypothetical protein	NA	NA	NA	NA
WP_024210595.1\|2196585_2197053_+\|lysis	lysis protein	A0A0H4IT10	Shigella_phage	3.6e-67	87.7
WP_000881332.1\|2197164_2197779_+	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	1.1e-63	68.6
WP_042187665.1\|2197806_2198007_+	hypothetical protein	Q9T1L1	Enterobacteria_phage	1.1e-09	76.9
WP_044696931.1\|2197928_2198180_+	hypothetical protein	H6WZK4	Escherichia_phage	2.2e-31	98.6
WP_000828070.1\|2198115_2198442_+	TonB family protein	H6WZK5	Escherichia_phage	6.3e-55	98.1
WP_000095744.1\|2198573_2198774_-	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	1.3e-29	97.0
WP_000829191.1\|2198815_2199181_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	1.0e-61	95.9
WP_000958387.1\|2199470_2200034_+\|terminase	terminase small subunit	A0A0N7KZJ8	Stx2-converting_phage	8.1e-90	100.0
WP_039264401.1\|2200030_2201692_+\|terminase	terminase large subunit	Q6H9U9	Enterobacteria_phage	0.0e+00	99.8
WP_146709891.1\|2201755_2203693_+\|capsid	phage major capsid protein	Q6H9U8	Enterobacteria_phage	0.0e+00	99.5
WP_001063099.1\|2203737_2203959_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_149508935.1\|2203904_2206490_+\|portal	phage portal protein	B6DZA1	Enterobacteria_phage	0.0e+00	96.1
WP_000125990.1\|2206486_2206813_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	9.2e-54	100.0
WP_001007905.1\|2206822_2207173_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573391.1\|2207169_2207616_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133388.1\|2207612_2207957_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_001275432.1\|2208022_2208739_+\|tail	tail protein	A0A0P0ZDV1	Stx2-converting_phage	6.2e-127	99.6
WP_000710934.1\|2208753_2209128_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	7.8e-65	99.2
WP_122993267.1\|2209223_2209433_+	DUF4035 domain-containing protein	H6WZM0	Escherichia_phage	1.5e-33	98.6
WP_047087069.1\|2209480_2212747_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	78.5
WP_000343409.1\|2212739_2213081_+\|tail	phage tail protein	A0A0P0ZDL9	Stx2-converting_phage	1.7e-50	81.2
WP_000738904.1\|2213279_2214443_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-140	66.9
WP_001365876.1\|2214653_2215352_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	1.4e-131	98.3
WP_024210611.1\|2215362_2216106_+\|tail	phage tail protein	S5MQI8	Escherichia_phage	3.1e-150	98.8
WP_047087102.1\|2216003_2216648_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	8.6e-88	73.5
WP_149508936.1\|2217578_2221274_+	DUF1983 domain-containing protein	Q6H9T2	Enterobacteria_phage	0.0e+00	84.6
WP_001270059.1\|2221342_2221966_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	9.0e-66	59.9
WP_149508937.1\|2222115_2223303_+\|tail	phage tail protein	S5MDN9	Escherichia_phage	1.5e-53	97.3
WP_149508938.1\|2223371_2224043_+	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	8.1e-105	82.5
WP_149508939.1\|2225654_2226161_-	DUF892 family protein	NA	NA	NA	NA
2225477:2225504	attR	NA	NA	NA	NA
WP_001056491.1\|2226206_2226707_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_000807651.1\|2226792_2226972_-	general stress protein	NA	NA	NA	NA
WP_000443056.1\|2227352_2228159_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000209516.1\|2228158_2229352_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_024177467.1\|2229363_2230722_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.0e-37	41.2
WP_000763511.1\|2230725_2232321_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_001194592.1\|2232320_2233883_-	anthranilate synthase component I	NA	NA	NA	NA
WP_001700591.1\|2233974_2234019_-	trp operon leader peptide	NA	NA	NA	NA
WP_001285661.1\|2234156_2235038_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001295575.1\|2235034_2235655_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001291216.1\|2235755_2236628_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_064560392.1\|2236667_2237258_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_000559280.1\|2237254_2238013_-	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.5e-06	25.0
WP_000422045.1\|2238232_2239282_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5

DBSCAN-SWA_7

2774796 : 2866097

117

Escherichia_phage(35.44%)

head,terminase,tRNA,capsid,tail,portal,holin,protease,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000984517.1\|2774796_2775678_-\|protease	protease HtpX	NA	NA	NA	NA
WP_001326055.1\|2775869_2777918_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.2e-85	33.3
WP_000431370.1\|2777937_2778636_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_149508957.1\|2778732_2779230_-	GAF domain-containing protein	NA	NA	NA	NA
WP_001207283.1\|2779359_2780643_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001299674.1\|2780611_2783245_+	lipid-binding membrane homeostasis protein YebT	NA	NA	NA	NA
WP_000057022.1\|2783324_2784764_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_001295499.1\|2784881_2785118_+	DUF1480 family protein	NA	NA	NA	NA
WP_001296140.1\|2785222_2785414_+	YebW family protein	NA	NA	NA	NA
WP_000812724.1\|2785414_2786071_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.1e-56	50.2
WP_000976492.1\|2786466_2786808_-	YebY family protein	NA	NA	NA	NA
WP_000879280.1\|2786820_2787693_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000204699.1\|2787696_2788071_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000916763.1\|2788209_2788440_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
WP_000011652.1\|2788541_2789198_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_000944256.1\|2789221_2789884_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
WP_000936936.1\|2789880_2791941_-	oligopeptidase B	NA	NA	NA	NA
WP_000024745.1\|2792149_2792809_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_001295500.1\|2793135_2793492_-	protein YebF	NA	NA	NA	NA
WP_000257738.1\|2793558_2793849_-	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_000173474.1\|2793982_2795161_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_000800512.1\|2795216_2795858_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_001069467.1\|2795894_2797706_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_000301727.1\|2797940_2799416_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	4.4e-79	37.5
WP_001056706.1\|2799753_2800623_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000091148.1\|2800750_2802193_+	pyruvate kinase	NA	NA	NA	NA
WP_000448381.1\|2802323_2803295_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_001184045.1\|2803414_2804737_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_001342995.1\|2804752_2805685_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_000202996.1\|2805763_2806519_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.3
WP_000571465.1\|2806515_2807301_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_000568519.1\|2807447_2808458_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|2808466_2809078_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_001386853.1\|2809216_2809282_-	hypothetical protein	NA	NA	NA	NA
WP_001024930.1\|2809352_2809955_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001295503.1\|2809956_2810478_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|2810512_2811253_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_077221229.1\|2811281_2811734_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258662.1\|2811726_2813499_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891610.1\|2813808_2814375_+	hydrolase	NA	NA	NA	NA
WP_001217534.1\|2814692_2814941_+	DinI-like family protein	S5MQI1	Escherichia_phage	8.0e-34	87.8
WP_050939615.1\|2815210_2815882_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	1.1e-106	83.9
WP_050939614.1\|2815950_2817219_-\|tail	phage tail protein	S5MDN9	Escherichia_phage	1.9e-54	98.2
WP_000078855.1\|2817363_2817504_-	Hok/Gef family protein	S5M7Q0	Escherichia_phage	8.5e-17	93.5
WP_050939610.1\|2817702_2821389_-	DUF1983 domain-containing protein	S5MW25	Escherichia_phage	0.0e+00	87.4
WP_122993618.1\|2821629_2822262_-\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	1.9e-100	91.0
WP_001365808.1\|2822207_2822951_-\|tail	phage tail protein	S5MQI8	Escherichia_phage	9.2e-142	93.9
WP_001499019.1\|2822961_2823660_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	2.1e-132	98.7
WP_000847279.1\|2823659_2823989_-\|tail	phage tail protein	S5MW28	Escherichia_phage	5.6e-59	100.0
WP_149508958.1\|2823985_2826559_-\|tail	phage tail tape measure protein	S5MBY3	Escherichia_phage	0.0e+00	85.2
WP_071532372.1\|2826539_2826953_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.3e-41	82.8
WP_000479116.1\|2826979_2827411_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_000235046.1\|2827424_2828177_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	1.0e-132	98.0
WP_149508959.1\|2828184_2828580_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	5.7e-58	81.7
WP_024213759.1\|2828576_2829152_-\|tail	tail protein	A0A2R9YJK4	Escherichia_phage	9.8e-51	58.7
WP_001204554.1\|2829167_2829521_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	70.1
WP_149508960.1\|2829513_2829897_-	DNA-packaging protein FI	NA	NA	NA	NA
WP_000522591.1\|2829948_2830977_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.6e-112	61.0
WP_000256823.1\|2831034_2831382_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
WP_097516823.1\|2831418_2832924_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	8.7e-99	52.8
WP_047091549.1\|2832913_2834506_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.2e-185	61.1
WP_000259002.1\|2834502_2834709_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_137557281.1\|2834692_2836663_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.8e-262	67.5
WP_001102145.1\|2836592_2837141_-\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	6.1e-58	82.7
WP_001109015.1\|2837803_2838346_-	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	1.1e-99	100.0
WP_032295775.1\|2838548_2838986_-\|lysis	lysis protein	A0A0P0ZFH2	Escherichia_phage	1.8e-68	97.2
WP_000443009.1\|2838988_2839138_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	6.7e-12	79.6
WP_001056888.1\|2839137_2839710_-	hypothetical protein	A0A088CD55	Shigella_phage	9.0e-97	88.4
WP_000992036.1\|2839984_2840518_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	7.4e-101	97.2
WP_001063217.1\|2840643_2840964_+	hypothetical protein	NA	NA	NA	NA
WP_149508961.1\|2840943_2841612_-	hypothetical protein	Q08JA0	Stx2-converting_phage	3.5e-60	76.7
WP_000284506.1\|2841615_2841831_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001447570.1\|2841908_2842154_-	DUF826 domain-containing protein	A0A088CE63	Shigella_phage	8.5e-20	82.7
WP_000142781.1\|2842194_2842374_-	DUF1378 family protein	A0A088CBQ0	Shigella_phage	7.1e-24	93.2
WP_149508962.1\|2842509_2844474_-	DUF1737 domain-containing protein	A0A0P0ZBH7	Stx2-converting_phage	8.5e-296	78.8
WP_134793002.1\|2844599_2844836_-	hypothetical protein	Q5MBW5	Stx1-converting_phage	8.7e-22	81.0
WP_000752026.1\|2844977_2845247_-	Shiga toxin Stx1a subunit B	Q7AYI7	Enterobacteria_phage	1.6e-43	100.0
WP_000691354.1\|2845256_2846204_-	Shiga toxin Stx1 subunit A	Q777W4	Enterobacteria_phage	3.2e-171	100.0
WP_072095549.1\|2846476_2846722_+	hypothetical protein	A0A0P0ZGS0	Escherichia_phage	7.1e-35	98.8
WP_001204859.1\|2846710_2847145_-	antitermination protein	A0A0P0ZGJ3	Escherichia_phage	4.8e-82	100.0
WP_000144764.1\|2847137_2847332_-	protein ninH	G9L694	Escherichia_phage	1.9e-30	100.0
WP_001108006.1\|2847328_2847934_-	recombination protein NinG	Q8VNP2	Enterobacteria_phage	1.9e-97	100.0
WP_001004008.1\|2847933_2848656_-	DNA-binding protein	A0A0P0ZCB2	Stx2-converting_phage	3.9e-129	99.6
WP_050940070.1\|2848730_2849465_-	antirepressor	A0A0N7C203	Escherichia_phage	1.8e-121	99.2
WP_001254256.1\|2849739_2849922_-	NinE family protein	A0A0N7C1X3	Escherichia_phage	5.7e-29	100.0
WP_050940068.1\|2849918_2850446_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	3.6e-100	99.4
WP_000736913.1\|2850442_2850883_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_149508963.1\|2850956_2851247_-	protein ren	O48423	Enterobacteria_phage	3.7e-46	99.0
WP_149508964.1\|2851243_2851945_-	Replication protein P	A0A0K2FIT1	Enterobacteria_phage	3.8e-129	99.6
WP_149508965.1\|2851941_2852841_-	replication protein	A0A0K2FJ31	Enterobacteria_phage	2.7e-172	99.0
WP_032247584.1\|2852873_2853170_-	hypothetical protein	A0A1U9AJB5	Stx1_converting_phage	8.9e-48	99.0
WP_000067727.1\|2853311_2853527_-	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
WP_001302016.1\|2853601_2854297_+	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	8.6e-134	100.0
WP_001074607.1\|2854343_2854886_+	hypothetical protein	NA	NA	NA	NA
WP_000528776.1\|2854873_2855650_+	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_149508966.1\|2856084_2856357_+	antitermination protein N	A0A0N7C217	Escherichia_phage	6.3e-40	96.7
WP_112050340.1\|2856485_2856542_+	hypothetical protein	NA	NA	NA	NA
WP_106421809.1\|2856511_2856583_+	hypothetical protein	NA	NA	NA	NA
WP_149508967.1\|2856765_2857134_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	1.9e-63	96.7
WP_001198861.1\|2857206_2857371_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000372939.1\|2857339_2857504_+	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	3.0e-21	96.2
WP_000995439.1\|2857557_2857854_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000100845.1\|2857859_2858645_+	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
WP_149508968.1\|2858641_2859322_+	YqaJ viral recombinase family protein	Q6H9Z0	Enterobacteria_phage	7.9e-132	99.1
WP_000682311.1\|2859318_2859501_+	DUF1317 domain-containing protein	A0A0P0ZD61	Stx2-converting_phage	1.4e-27	96.7
WP_000548531.1\|2859473_2859665_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_077250124.1\|2859675_2859957_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	7.9e-46	97.8
WP_000763363.1\|2860055_2860277_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	6.4e-35	98.6
WP_149508969.1\|2860273_2860903_+	ead/Ea22-like family protein	A0A0K2FJF6	Enterobacteria_phage	1.7e-43	97.8
WP_001167293.1\|2860905_2861397_+	hypothetical protein	G9L661	Escherichia_phage	2.0e-84	93.3
WP_000224227.1\|2861398_2861662_+	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000457723.1\|2862110_2862353_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
WP_001193437.1\|2862509_2862764_+	DUF1233 family excisionase	Q859D3	Escherichia_coli_phage	3.0e-44	100.0
WP_149508970.1\|2862797_2864084_+	DUF3596 domain-containing protein	Q20GI2	Phage_258-320	4.1e-246	96.7
WP_096096185.1\|2864100_2864865_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.0e-72	99.2
WP_000252979.1\|2864917_2865313_+	membrane protein	NA	NA	NA	NA
WP_000019588.1\|2865353_2866097_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0

DBSCAN-SWA_8

3096875 : 3152999

Escherichia_phage(48.94%)

head,terminase,tRNA,transposase,plate,tail,capsid,portal,integrase,holin,lysis

attL 3101933:3101960|attR 3132874:3132901

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000675150.1\|3096875_3098279_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	3.0e-32	29.0
WP_000137869.1\|3098275_3098998_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	1.4e-30	33.2
WP_000929408.1\|3099188_3099521_+	YegP family protein	NA	NA	NA	NA
WP_001307279.1\|3099729_3100026_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_001220181.1\|3100027_3100324_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000476011.1\|3100426_3101788_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.1e-217	100.0
3101933:3101960	attL	NA	NA	NA	NA
WP_000468308.1\|3102060_3102279_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_064579175.1\|3102360_3103524_-	phage late control D family protein	A0A0F7LDR0	Escherichia_phage	4.5e-204	99.0
WP_001540336.1\|3103523_3104003_-\|tail	phage tail protein	Q858U6	Yersinia_virus	2.3e-85	100.0
WP_149508981.1\|3104017_3106465_-\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	0.0e+00	95.7
WP_000785970.1\|3106457_3106577_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031307.1\|3106609_3106885_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
WP_001251408.1\|3106942_3107461_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_050867472.1\|3107473_3108664_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	9.0e-224	99.0
WP_085947917.1\|3108837_3110111_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_149508982.1\|3110141_3110594_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	9.2e-20	41.8
WP_050867471.1\|3110560_3112291_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	3.1e-84	64.3
WP_096942735.1\|3112287_3112899_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	6.4e-117	99.5
WP_001121473.1\|3112891_3113800_-\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	2.6e-162	99.7
WP_000127163.1\|3113804_3114152_-\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001001795.1\|3114849_3115302_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	1.1e-76	99.3
WP_000917193.1\|3115294_3115762_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	5.7e-81	98.1
WP_001440152.1\|3115724_3115898_-	hypothetical protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
WP_033549336.1\|3115869_3116295_-\|lysis	LysB family phage lysis regulatory protein	Q858W0	Yersinia_virus	8.0e-66	97.2
WP_149508983.1\|3116282_3116708_-	protein lysA	A0A0F7LBP4	Escherichia_phage	6.1e-58	93.6
WP_001144101.1\|3116722_3117220_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_000123124.1\|3117219_3117501_-\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_000846399.1\|3117504_3117708_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000988633.1\|3117707_3118217_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_149508984.1\|3118316_3119060_-\|terminase	terminase endonuclease subunit	Q94MF8	Enterobacteria_phage	2.8e-122	99.6
WP_088563374.1\|3119063_3120137_-\|capsid	phage major capsid protein, P2 family	Q94MK2	Enterobacteria_phage	4.8e-200	99.4
WP_001085953.1\|3120195_3121050_-\|capsid	GPO family capsid scaffolding protein	Q778Z1	Enterobacteria_phage	4.6e-137	100.0
WP_000156847.1\|3121223_3122996_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCM8	Escherichia_phage	0.0e+00	100.0
WP_061093409.1\|3122995_3124030_+\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	5.5e-201	99.4
WP_071987867.1\|3124373_3125528_-	DNA cytosine methyltransferase	Q83VT0	Escherichia_phage	3.2e-210	99.4
WP_071526056.1\|3125548_3125818_+	helix-turn-helix transcriptional regulator	Q83VS9	Escherichia_phage	3.6e-40	100.0
WP_000866882.1\|3125795_3126851_+	restriction endonuclease, SacI family	Q83VS8	Escherichia_phage	2.2e-197	100.0
WP_050877419.1\|3126944_3129215_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.2
WP_000027664.1\|3129204_3129480_-	DUF5405 family protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_001113264.1\|3129476_3129701_-	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_001277897.1\|3129700_3130003_-	DUF5405 family protein	A0A0F7LCL4	Escherichia_phage	8.5e-46	98.0
WP_000557705.1\|3130002_3130227_-	DUF2732 family protein	S4TP68	Salmonella_phage	1.4e-32	98.6
WP_000217670.1\|3130290_3130791_-	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_001081582.1\|3130968_3131244_-	hypothetical protein	Q1JS60	Enterobacteria_phage	1.3e-48	100.0
WP_000020919.1\|3131365_3131665_+	helix-turn-helix domain-containing protein	Q1JS61	Enterobacteria_phage	2.4e-48	100.0
WP_000985261.1\|3131780_3132794_+\|integrase	site-specific integrase	Q83VS6	Escherichia_phage	4.1e-193	99.1
WP_000716757.1\|3133058_3133376_-	hypothetical protein	NA	NA	NA	NA
3132874:3132901	attR	NA	NA	NA	NA
WP_149508985.1\|3133790_3134690_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	2.8e-12	28.5
WP_000178552.1\|3134771_3135551_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000844200.1\|3135650_3136691_-	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_000490714.1\|3136738_3138094_-	galactitol permease IIC component	NA	NA	NA	NA
WP_000823272.1\|3138097_3138382_-	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_000182899.1\|3138412_3138865_-	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000853892.1\|3138874_3140137_-	tagatose-bisphosphate aldolase subunit GatZ	NA	NA	NA	NA
WP_000289788.1\|3140165_3141020_-	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_122653560.1\|3141022_3141256_-	hypothetical protein	NA	NA	NA	NA
WP_000129551.1\|3141329_3142382_-	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_000858484.1\|3142638_3143916_+	nucleoside permease	NA	NA	NA	NA
WP_000846219.1\|3143912_3144917_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	1.3e-13	29.4
WP_000011973.1\|3144913_3145879_+	sugar kinase	NA	NA	NA	NA
WP_000434038.1\|3145852_3146599_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001315719.1\|3146650_3147469_-	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	2.3e-24	38.5
WP_000822274.1\|3147533_3148334_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_001195590.1\|3148330_3149119_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_149508986.1\|3149740_3149926_+	hypothetical protein	NA	NA	NA	NA
WP_149508987.1\|3149882_3150071_+	hypothetical protein	NA	NA	NA	NA
WP_149508988.1\|3150229_3150511_-	hypothetical protein	NA	NA	NA	NA
WP_115199398.1\|3151170_3151584_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_044860985.1\|3151596_3151932_-\|head	head decoration protein	NA	NA	NA	NA
WP_062895690.1\|3151943_3152999_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.3e-69	43.1

DBSCAN-SWA_9

3183687 : 3193129

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292774.1\|3183687_3184824_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.1e-162	97.7
WP_001317947.1\|3184820_3186821_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.1
WP_001295429.1\|3186945_3187407_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001295430.1\|3187447_3187918_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|3187964_3188684_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|3188680_3190366_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|3190587_3191319_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|3191378_3191486_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|3191466_3192198_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569325.1\|3192202_3193129_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_10

3813893 : 3821033

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272924.1\|3813893_3816455_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
WP_001141340.1\|3816560_3817217_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	8.0e-49	46.3
WP_001297141.1\|3817267_3818035_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
WP_000847985.1\|3818230_3819139_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_149509021.1\|3819135_3820398_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.0e-134	61.2
WP_001278994.1\|3820394_3821033_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_11

4065761 : 4147601

Stx2-converting_phage(25.0%)

integrase,tRNA,transposase

attL 4064926:4064941|attR 4078851:4078866

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4064926:4064941	attL	NA	NA	NA	NA
WP_053891991.1\|4065761_4066481_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001295382.1\|4066641_4067694_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|4067721_4067997_+	oxidative damage protection protein	NA	NA	NA	NA
WP_001298916.1\|4068061_4069141_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001049791.1\|4069342_4070599_+	nucleoside permease	NA	NA	NA	NA
WP_000839764.1\|4070648_4072784_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234514.1\|4073181_4073889_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218813.1\|4074267_4075533_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	2.0e-80	42.8
WP_000147021.1\|4075788_4076832_+	hypothetical protein	NA	NA	NA	NA
WP_033815229.1\|4077190_4078693_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_062896446.1\|4080047_4081874_+	two-component system sensor histidine kinase AtoS	W8CYF6	Bacillus_phage	9.8e-20	26.9
4078851:4078866	attR	NA	NA	NA	NA
WP_149509026.1\|4083450_4084113_+	acetate CoA-transferase subunit alpha	NA	NA	NA	NA
WP_000339054.1\|4084112_4084763_+	CoA transferase subunit B	NA	NA	NA	NA
WP_000580275.1\|4084759_4086082_+	TIGR00366 family protein	NA	NA	NA	NA
WP_000786522.1\|4086112_4087297_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_149509027.1\|4089057_4089363_-	hypothetical protein	NA	NA	NA	NA
WP_071531291.1\|4089451_4089631_+	hypothetical protein	NA	NA	NA	NA
WP_000477612.1\|4091651_4091873_-	hypothetical protein	NA	NA	NA	NA
WP_001367252.1\|4093205_4093388_-	hypothetical protein	NA	NA	NA	NA
WP_149509028.1\|4093326_4095414_+	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	3.4e-08	32.2
WP_000593011.1\|4095759_4097604_-	TonB-dependent vitamin B12 receptor BtuB	A0A0P0I887	Acinetobacter_phage	8.1e-14	31.3
WP_071531293.1\|4098056_4098317_-\|transposase	transposase	NA	NA	NA	NA
WP_001032733.1\|4098504_4098762_-	hypothetical protein	NA	NA	NA	NA
WP_085947917.1\|4099293_4100566_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_149509029.1\|4101472_4105564_+	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	3.8e-298	44.0
WP_149509030.1\|4105791_4107405_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.0e-167	63.0
WP_000624684.1\|4107435_4107786_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.8e-40	67.2
WP_000422722.1\|4107782_4108208_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	9.8e-48	96.9
WP_000789658.1\|4108408_4108600_+	hypothetical protein	NA	NA	NA	NA
WP_000997728.1\|4108610_4108976_+	hypothetical protein	NA	NA	NA	NA
WP_000264910.1\|4108985_4109177_+	hypothetical protein	NA	NA	NA	NA
WP_000323309.1\|4109210_4109420_+	hypothetical protein	NA	NA	NA	NA
WP_001378814.1\|4109917_4110562_-	hypothetical protein	NA	NA	NA	NA
WP_000226517.1\|4110582_4110852_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000502848.1\|4110930_4111569_-	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	1.5e-55	52.5
WP_149509070.1\|4113285_4115454_-	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_149509071.1\|4117454_4119200_-	AAA family ATPase	NA	NA	NA	NA
WP_149509072.1\|4119377_4119926_-	Ail/Lom family outer membrane beta-barrel protein	Q9LA63	Enterobacterial_phage	2.6e-16	32.4
WP_000931685.1\|4120496_4120811_-	hypothetical protein	NA	NA	NA	NA
WP_149509031.1\|4120914_4121151_-	hypothetical protein	NA	NA	NA	NA
WP_101911705.1\|4121137_4122145_-	VENN motif pre-toxin domain-containing protein	NA	NA	NA	NA
WP_071531845.1\|4122526_4122712_-	hypothetical protein	NA	NA	NA	NA
WP_062896426.1\|4123185_4123641_-	hypothetical protein	NA	NA	NA	NA
WP_077173362.1\|4123645_4124155_-	hypothetical protein	NA	NA	NA	NA
WP_064769067.1\|4124413_4124803_-	hypothetical protein	NA	NA	NA	NA
WP_137568204.1\|4124805_4125372_-	hypothetical protein	NA	NA	NA	NA
WP_000877779.1\|4129099_4129357_-	hypothetical protein	NA	NA	NA	NA
WP_149509032.1\|4129353_4138326_-	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	1.9e-55	40.2
WP_052892273.1\|4138341_4138869_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
WP_001376511.1\|4138878_4140531_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	A0A0R6PI85	Moraxella_phage	2.2e-39	28.4
WP_001287885.1\|4141206_4141398_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000124190.1\|4141450_4141684_-	hypothetical protein	NA	NA	NA	NA
WP_001366001.1\|4141779_4142403_-	hypothetical protein	NA	NA	NA	NA
WP_021552435.1\|4142491_4142989_-	hypothetical protein	NA	NA	NA	NA
WP_074435780.1\|4143338_4143785_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_085947917.1\|4144269_4145543_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_000624677.1\|4145627_4145978_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.8e-39	66.4
WP_149509033.1\|4146008_4147601_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-174	61.4

DBSCAN-SWA_12

4744326 : 4847873

102

Escherichia_phage(41.67%)

head,terminase,plate,transposase,tail,capsid,portal,integrase,holin,protease,lysis

attL 4811027:4811073|attR 4841308:4841354

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000101907.1\|4744326_4745568_-\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	1.6e-98	43.1
WP_000191257.1\|4746586_4747600_+	inner membrane protein YhjD	NA	NA	NA	NA
WP_001149002.1\|4748010_4749333_+	MHS family MFS transporter	NA	NA	NA	NA
WP_001315896.1\|4749566_4751627_-	AsmA family protein	NA	NA	NA	NA
WP_001295219.1\|4751696_4752464_-	cyclic-guanylate-specific phosphodiesterase	NA	NA	NA	NA
WP_001296796.1\|4752695_4753625_+	sugar kinase	NA	NA	NA	NA
WP_001163135.1\|4753720_4755217_-	insulinase family protein	NA	NA	NA	NA
WP_000858214.1\|4755437_4756724_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_001266306.1\|4756906_4758895_-	biofilm formation regulator HmsP	NA	NA	NA	NA
WP_001225102.1\|4758976_4762450_-	cellulose biosynthesis protein BcsC	NA	NA	NA	NA
WP_001307453.1\|4762431_4763538_-	cellulase	NA	NA	NA	NA
WP_149509059.1\|4763544_4765884_-	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA
WP_000279528.1\|4768509_4769262_-	cellulose biosynthesis protein BcsQ	NA	NA	NA	NA
WP_001063318.1\|4769273_4769462_-	hypothetical protein	NA	NA	NA	NA
WP_001204931.1\|4769734_4771306_+	cellulose biosynthesis protein BcsE	NA	NA	NA	NA
WP_000988308.1\|4771302_4771494_+	cellulose biosynthesis protein BcsF	NA	NA	NA	NA
WP_000191596.1\|4771490_4773170_+	cellulose biosynthesis protein BcsG	NA	NA	NA	NA
WP_001295224.1\|4773256_4773364_-	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_001295224.1\|4773739_4773847_-	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_001295224.1\|4774222_4774330_-	type I toxin-antitoxin system toxin Ldr family protein	NA	NA	NA	NA
WP_001296805.1\|4774805_4776077_+	transporter	NA	NA	NA	NA
WP_000107018.1\|4776106_4777111_-	dipeptide ABC transporter ATP binding subunit DppF	G3M9Y6	Bacillus_virus	8.6e-18	29.9
WP_001196486.1\|4777107_4778091_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-15	28.8
WP_000084677.1\|4778101_4779004_-	dipeptide ABC transporter permease DppC	NA	NA	NA	NA
WP_000938855.1\|4779013_4780033_-	dipeptide ABC transporter permease DppB	NA	NA	NA	NA
WP_000198578.1\|4780050_4780278_+	hypothetical protein	NA	NA	NA	NA
WP_001222883.1\|4780340_4781948_-	dipeptide ABC transporter substrate-binding protein DppA	NA	NA	NA	NA
WP_000399648.1\|4782791_4783772_+\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA
WP_071531605.1\|4783786_4784116_+	hypothetical protein	NA	NA	NA	NA
WP_000797341.1\|4784006_4784615_+	YiiX family permuted papain-like enzyme	NA	NA	NA	NA
WP_000644414.1\|4785607_4785844_-	hypothetical protein	NA	NA	NA	NA
WP_149509060.1\|4785845_4790030_-	DUF4329 domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	3.6e-25	32.5
WP_000710769.1\|4790189_4790402_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_001315935.1\|4790604_4792803_+	primosomal protein N'	NA	NA	NA	NA
WP_000644904.1\|4792958_4793984_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA
WP_000068834.1\|4794075_4795035_+	cell division protein FtsN	NA	NA	NA	NA
WP_000208242.1\|4795127_4795658_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001293343.1\|4795667_4796999_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	1.7e-45	29.9
WP_001307494.1\|4797065_4797992_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000872908.1\|4798084_4798570_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_001296623.1\|4798654_4798900_-	septal ring assembly protein ZapB	NA	NA	NA	NA
WP_000084268.1\|4799325_4800171_+	glycerol uptake facilitator protein GlpF	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.4e-15	28.0
WP_000136788.1\|4800193_4801702_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_001250644.1\|4801837_4802848_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000796320.1\|4802944_4803691_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_000323556.1\|4803695_4804124_-	universal stress protein UspD	NA	NA	NA	NA
WP_000655986.1\|4804150_4804450_-	DUF406 domain-containing protein	NA	NA	NA	NA
WP_000155272.1\|4804661_4805102_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_000802226.1\|4805202_4805802_+	YiiQ family protein	NA	NA	NA	NA
WP_001216325.1\|4805909_4806677_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_000708998.1\|4806731_4807487_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA
WP_001045689.1\|4807593_4808583_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000591795.1\|4808902_4809865_-	6-phosphofructokinase	NA	NA	NA	NA
WP_001076742.1\|4810045_4810948_-	CDF family cation-efflux transporter FieF	NA	NA	NA	NA
4811027:4811073	attL	NA	NA	NA	NA
WP_000468308.1\|4811184_4811403_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000882975.1\|4811484_4812648_-	phage late control D family protein	U5N3V4	Enterobacteria_phage	3.7e-206	99.7
WP_001471798.1\|4812647_4813127_-\|tail	phage tail protein	Q7Y4C7	Escherichia_virus	1.1e-84	99.4
WP_149509061.1\|4813141_4815589_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	98.9
WP_000785970.1\|4815581_4815701_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031307.1\|4815733_4816009_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
WP_001251408.1\|4816066_4816585_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001696396.1\|4816597_4817788_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.0e-224	99.2
WP_101981607.1\|4817911_4818382_-\|tail	phage tail protein	A0A0F7LDZ0	Escherichia_phage	1.2e-22	42.8
WP_050867471.1\|4818348_4820079_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	3.1e-84	64.3
WP_096942735.1\|4820075_4820687_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	6.4e-117	99.5
WP_001121473.1\|4820679_4821588_-\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	2.6e-162	99.7
WP_000127163.1\|4821592_4821940_-\|plate	baseplate assembly protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_050867469.1\|4821936_4822572_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	8.5e-112	97.6
WP_001001795.1\|4822638_4823091_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	1.1e-76	99.3
WP_000917193.1\|4823083_4823551_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	5.7e-81	98.1
WP_001440152.1\|4823513_4823687_-	hypothetical protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
WP_033549336.1\|4823658_4824084_-\|lysis	LysB family phage lysis regulatory protein	Q858W0	Yersinia_virus	8.0e-66	97.2
WP_050867466.1\|4824071_4824497_-	hypothetical protein	A0A0F7LBP4	Escherichia_phage	7.2e-59	94.3
WP_001144101.1\|4824511_4825009_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_000123124.1\|4825008_4825290_-\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_000846399.1\|4825293_4825497_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-31	100.0
WP_000988633.1\|4825496_4826006_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
WP_149508984.1\|4826105_4826849_-\|terminase	terminase endonuclease subunit	Q94MF8	Enterobacteria_phage	2.8e-122	99.6
WP_088563374.1\|4826852_4827926_-\|capsid	phage major capsid protein, P2 family	Q94MK2	Enterobacteria_phage	4.8e-200	99.4
WP_001085953.1\|4827984_4828839_-\|capsid	GPO family capsid scaffolding protein	Q778Z1	Enterobacteria_phage	4.6e-137	100.0
WP_000156847.1\|4829012_4830785_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCM8	Escherichia_phage	0.0e+00	100.0
WP_021526258.1\|4830784_4831819_+\|portal	phage portal protein	M1SV64	Escherichia_phage	7.1e-201	99.4
WP_001284793.1\|4832597_4833374_+	cytolethal distending toxin type V subunit CdtA	G1BEM3	Escherichia_phage	7.9e-136	100.0
WP_000759934.1\|4833370_4834180_+	cytolethal distending toxin type III/V nuclease subunit CdtB	G1BEM4	Escherichia_phage	4.0e-151	100.0
WP_050868087.1\|4834194_4834740_+	cytolethal distending toxin type V subunit CdtC	M1SNM4	Escherichia_phage	1.6e-98	98.9
WP_089647395.1\|4834815_4837113_-	replication endonuclease	U5N0W3	Enterobacteria_phage	0.0e+00	97.6
WP_000027667.1\|4837102_4837378_-	DUF5405 family protein	Q858T5	Yersinia_virus	3.8e-45	100.0
WP_001113264.1\|4837374_4837599_-	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_001277966.1\|4837598_4837901_-	DUF5405 family protein	U5N0U2	Enterobacteria_phage	1.7e-46	99.0
WP_000557703.1\|4837900_4838125_-	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_000217682.1\|4838188_4838689_-	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	1.7e-91	99.4
WP_000453534.1\|4838858_4839131_-	hypothetical protein	Q1JS44	Enterobacteria_phage	1.5e-46	100.0
WP_001192858.1\|4839283_4839577_+	helix-turn-helix domain-containing protein	Q1JS45	Enterobacteria_phage	5.2e-48	99.0
WP_000023382.1\|4839646_4840630_+\|integrase	tyrosine-type recombinase/integrase	Q7Y4C5	Escherichia_virus	3.2e-182	97.5
WP_000418739.1\|4840630_4840867_-	hypothetical protein	NA	NA	NA	NA
WP_000185307.1\|4840850_4841186_+	hypothetical protein	NA	NA	NA	NA
WP_001223800.1\|4841377_4841878_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
4841308:4841354	attR	NA	NA	NA	NA
WP_001033722.1\|4842027_4842726_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_000580417.1\|4842722_4844096_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.8e-16	25.9
WP_001270260.1\|4844201_4844876_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_001166063.1\|4845024_4846008_-	2-keto-3-deoxygluconate transporter	NA	NA	NA	NA
WP_000399648.1\|4846892_4847873_-\|transposase	IS110-like element IS621 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043478

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection