CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042816	Treponema phagedenis strain B31.4 chromosome, complete genome	13 crisprs	csa3,DinG,WYL,DEDDh,cas3,cas9	8	0	9	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042816_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_1

230360-230445

Orphan

Consensus_repeat	Method
TAAGCGGCTTAACAAGTTTGAAA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP042816_1

>merge|NZ_CP042816|1|230360-230445|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAAGAGCTGTACTGCAACAACAATCAGCTAACCACATTGAACGTAAGCGGCTTAACAAGTTTGCAA

>NZ_CP042816|1|1|230360-230445|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAA	GAGCTGTACTGCAACAACAATCAGCTAACCACATTGAACG
TAAGCGGCTTAACAAGTTTGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_148879530.1\|236815_237142_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752753.1\|220133_220751_-\|MptD-family-putative-ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|370580
NZ_CP042816.1\|WP_002700668.1\|225219_226062_+\|FAD-binding-domain-in-molybdopterin-dehydrogenase	unknown	unknown	gnl\|CDD\|366378
NZ_CP042816.1\|WP_148879525.1\|226058_226271_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879531.1\|237926_238886_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP042816.1\|WP_044634969.1\|226735_227119_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024751669.1\|238891_239188_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_081718756.1\|224719_225223_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP042816.1\|WP_024751739.1\|234665_235715_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227596
NZ_CP042816.1\|WP_148879529.1\|236512_236812_+\|DUF4406-domain-containing-protein	unknown	unknown	gnl\|CDD\|379581
NZ_CP042816.1\|WP_148878901.1\|228854_230135_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|213207
NZ_CP042816.1\|WP_148879528.1\|231693_232656_+\|recombination-and-repair-protein-RecT	unknown	unknown	gnl\|CDD\|236628
NZ_CP042816.1\|WP_002700663.1\|221467_222631_+\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223476
NZ_CP042816.1\|WP_044634970.1\|227251_227638_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024751671.1\|237687_237927_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879526.1\|227822_228839_+\|endonuclease	unknown	unknown	gnl\|CDD\|227668
NZ_CP042816.1\|WP_002696692.1\|232671_233475_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024751742.1\|231072_231645_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP042816.1\|WP_148879322.1\|222705_224766_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224446
NZ_CP042816.1\|WP_024751636.1\|235728_236508_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236153

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_024752753.1\|220133_220751_-\|MptD-family-putative-ECF-transporter-S-component	gnl\|CDD\|370580	pfam09605, Trep_Strep, Hypothetical bacterial integral membrane protein (Trep_Strep). This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. It is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.	6.02694e-48
NZ_CP042816.1\|WP_002700668.1\|225219_226062_+\|FAD-binding-domain-in-molybdopterin-dehydrogenase	gnl\|CDD\|366378	pfam00941, FAD_binding_5, FAD binding domain in molybdopterin dehydrogenase.	5.96053e-34
NZ_CP042816.1\|WP_148879531.1\|237926_238886_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	7.50339e-68
NZ_CP042816.1\|WP_148879528.1\|231693_232656_+\|recombination-and-repair-protein-RecT	gnl\|CDD\|236628	PRK09846, recT, recombination protein RecT.	7.16421e-75
NZ_CP042816.1\|WP_081718756.1\|224719_225223_+\|hypothetical-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	3.65345e-47
NZ_CP042816.1\|WP_024751739.1\|234665_235715_+\|hypothetical-protein	gnl\|CDD\|227596	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].	0.00576783
NZ_CP042816.1\|WP_148879529.1\|236512_236812_+\|DUF4406-domain-containing-protein	gnl\|CDD\|379581	pfam14359, DUF4406, Domain of unknown function (DUF4406). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 98 and 145 amino acids in length.	1.05077e-09
NZ_CP042816.1\|WP_148878901.1\|228854_230135_+\|AAA-family-ATPase	gnl\|CDD\|213207	cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50. The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.	4.92498e-06
NZ_CP042816.1\|WP_024751636.1\|235728_236508_+\|ATP-binding-protein	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.48504e-17
NZ_CP042816.1\|WP_002700663.1\|221467_222631_+\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	gnl\|CDD\|223476	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].	6.66971e-144
NZ_CP042816.1\|WP_148879526.1\|227822_228839_+\|endonuclease	gnl\|CDD\|227668	COG5377, COG5377, Phage-related protein, predicted endonuclease [DNA replication, recombination, and repair].	1.59871e-30
NZ_CP042816.1\|WP_024751742.1\|231072_231645_+\|3'-5'-exonuclease	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	9.06068e-23
NZ_CP042816.1\|WP_148879322.1\|222705_224766_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	3.02782e-39

>NZ_CP042816.1|WP_148878901.1|228854_230135_+|AAA-family-ATPase
MLLKNIEIRNVRKIKQAEIEFHGAGVQVIQGLNKSGKTTIAQSIALTLGGSKDFVPGMISVGEEQAEIIAYTDDELKIRTLIGEKVTQDVSQLDELTGRYAKVSGGVRAFLDSIRSGLEMPFAIKDWTDESIIELLKERTGTSEKIALIDEELKRLEEARTQTGRDKKRLGTPTPVPKVEHAKPIDELQAEKEKAQNFLSTLKNAFSNINQEMHTLNIESESDIDAAIQRLELAKENLHKWLSKNHKQYSKEDIAEIDAAILEWNKNETAANAYDAYIAACDEIKKLEDEYNGLTKKIEAKRQERKDTLASMDLGVPGLEINEDNQLVHNGAIRGITKTNTIGNWSTAQSIQVFFSLGVRFSGEMKVMVVDNAESLDEAHTAIISEWAEKSGFLVIMLKVGDVPEELEEGIIYLKNGEVVANEYRI
>NZ_CP042816.1|WP_148879526.1|227822_228839_+|endonuclease
MENLVKQLLGKDTNYVFTKSMAKDEWRNARRSSIGGSDAGAIMGLNKWASPLTVYLDKKGLHSFEGNMFTERGSWLEDPIRQRCREEFGVLIEEVPYMFYSGEQKFMSANIDGLIYVQEPKTISGIEVSGLGGHEIKTSQRGDGFGENEIPDSYFAQVQHYMSVLNLDWFVLSAYIIDKNELRHYAINRDEAFITRLVKAEKTFWEDFIEENIMPAPSGVDAEDEAIAKMFEGAENTLILDGEAESMSAEYLLINAQIKELEEKKSKLSSSLKLKIIEQQTNSEEKKAKAVAGKYNLSFSKSIRRTVDSEKLKKDGLYEQYLKESEVAMLRITEPKAK
>NZ_CP042816.1|WP_044634970.1|227251_227638_+|hypothetical-protein
MSEPITKVSETISFEDDCTFGNVETKLSNGWTVTQKFSWSFDSYYEPEIDYQCEDVGDLSIFDKNMEPYSNELTSEEEKALARLCIKDADELTDAVYQQTDWKSLAEEVREYNKNPYSYYGVTPLDFI
>NZ_CP042816.1|WP_044634969.1|226735_227119_+|hypothetical-protein
MNIEEIKKLSLNRRKTIAKSEKTPQNILLSLAASDPHRYVRGAVAENINVTADILEILLEDDDLYVRNKARERLGLFKLRLSEEREKTIEEKAEDIEDECDCLADFEARKKEQERWAKGAEICIPFK
>NZ_CP042816.1|WP_148879525.1|226058_226271_-|hypothetical-protein
MFSCFRVKISRFGFDKDVKNSEPPRTAVVPRSSDVLKQSNLQSFKTRKFGFDMDVKTKPLDSFYYIVSQV
>NZ_CP042816.1|WP_002700668.1|225219_226062_+|FAD-binding-domain-in-molybdopterin-dehydrogenase
MKNMDKTSTIYLPRTMAELQSIIKNISNIHAIGGGTEFLRKQYRKNLYFPERIAVLKNIPELKSISKTERTIDFGAAASLQSIVDLGEKNIPQALYEALIYCANPAIRNLATIGGNIAKLRPQSSTLAVLASLDAKIEIRTAAETLWLPIIRFADPKFTDLRSKNHIITKIRISSEPWDYVFYKRIGGTVISKNSASFIFLVRLQKNIIYEMRLIFSNNKFIKNKEFNNLFIGRTVPISERDITVLIEKCTEFFPENTFQNNYLKNCFFNLIEDCLYKLI
>NZ_CP042816.1|WP_081718756.1|224719_225223_+|hypothetical-protein
MLTTTSRWRKRKMRINFKLNGTEIQMDANPHERLSDVLRREFNILSVKESYPYGENGSSTIILDGKAVPACMVPIFLAANTEIITLEYFQTQNEYKEIINAFKQAGVSLCGYCNTGKILTIYTLLQQNAYPSEEEIKDALSGIVCRCTCMDDIISAVKRIKPQRKKR
>NZ_CP042816.1|WP_148879322.1|222705_224766_+|molybdopterin-dependent-oxidoreductase
MKKFVSDIHFENEYFSLLIRSPIAEGVLLGIDVPELPENCFFYSAKDVPGINKIEVFGSSIPIFAGPELNYKGESIGILVGNNLKTLYDVSKQFVIRAQSTPTEEFEKPIDFFDYPKFAHESRSYNNADGILDSADTIIYSSTVFEPQYHYFAELPIVKACPGNKTLSVYASSQWAAHVKKSVSEALKMPEKNIDFFSQAEGEALDGKIWFPSLMAAQVAVAAWLSGKPVSLGLSLKEYYAFAPKTPKIIIQHKTALSKNNEIEAMRTFILIEAGAYSPLIKIMISQMLAAANADYFIPAHTIEAIAVKSNDGMTDIFNGWGGAYVNNALEKHINEICSQLNVMPDEWRLKNMQHAAVKQYQNAKASAASVFSDLLKTVCQNSDFYRKYNVYNFLNSKREKRDPHAWRGTGIAIGFQYNGVQAIIDEGFTYAVEITLDTNSKIYVKTDTISETMQKILKKDIAKKLSVEENTIVFEEKEASAASLMTASAEIIIIPDLIDKCVKTIQGQRFRKPLPITVQKRYRKPRRAKTKDQAKDESFLSKTPAACAIELEMDPVCQDIQVKGVWLACMPGALYSKRAALTEIHKNIITALSKVNSEIIRKKTGVMQNNSIINAKDIPPIHIYLLESQSKPLGTNMIAEGIIHAAYLSALSQVLINTENHLIIAPSLTSNADNNEPLEETENEN
>NZ_CP042816.1|WP_002700663.1|221467_222631_+|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein
MKNRTVPFFKPSFTTEEEEAVCRVLRSGWLTTAKEALDFEKEFADFVGAKHALAVNSATSGLLLSMHAAGITAGTKILTSPYTFISTATTALHLGGGIVYADIEPDSYNISPEQIEEKLKRDPQIKAIVPIHIAGNVCNMREINRLAKQYGVAVIEDAAHSFPSKTAQGYAGTLGTLGVFSFYATKTITTGEGGMVCTNDDALAKRISVLRSHGINRTIWDRYTDSKASWVYDVSDLGWKCNLPDILAAIGRVQLRKAESFFQKRKAIAEQFNKAFSQYDFLQTPPDGDGNAWHLYLLRLVPEKISVTREAFAQALQEKGLGISVHFIPHFEFTYIKEQLGVQAKDFPQAAAKYANTITLPFWPDMSDEDIAYVIDTVIQTGKEFAR
>NZ_CP042816.1|WP_024752753.1|220133_220751_-|MptD-family-putative-ECF-transporter-S-component
MEETNLQNNKPVEKTGLVLKDFVNIGIFTVIYFVALFIVGTPLGILVVTYFAYPFTASLVLGILGMFLLAKIQKPFGLFIFAALPGVLTTVLGHTPVVAIHSLIVAAIAELVRKFLGYKTIKGSIAGYAIMSLWFVGPFWQIFILKDQYYALTEKMMGTEYAIQLTSLPIWVIPMLYVTSCIGGILGGLLGAKVLKKHFQKAGLV
>NZ_CP042816.1|WP_024751742.1|231072_231645_+|3'-5'-exonuclease
MNTIWCDTETTGLEPENSGAFEIAFIFAGKGKVTCERLFKLNPLNETILYHEEAAKTHGVSEEEIRSFPPAEEIVPNIANFFQQAIHVFGDGEKLTFAGYNCNFDYRHLEALFNRCGLTLADYFSKQFDALKFVKKATRQKAIPRLENLKLGTVCKSLGVNLENAHTALADIQATQALCIELFKRGVKVE
>NZ_CP042816.1|WP_148879528.1|231693_232656_+|recombination-and-repair-protein-RecT
MNVNNTNKNQVTAKTKGGDLRSMIMANMDMFKMALPKAITPERMTRIAMTAVTRNPKLALCNQNSFFGALLTAAQLGLEVNTPLGQAYLLPYDSKNGLQCQFQLGYQGMLELAYRSGQFKRIKAVVVHEGDEFTYSYGLNAILEHTPSGNGNPTHVYALYELTNGGVDFEVWTWEKVMQHGMTFSKSFENGPWQTAPEEMAKKTVLKALLKYAPKAVELAEAANLDEGIIDKKLVRNDGIAEIVTNIEYTEPVQQQTAVQYAEQDPVNANGKTRSSERQKSGAAAQMSKEQQMANEDEQAIEKFELQQNAMFDIAPEFPM
>NZ_CP042816.1|WP_002696692.1|232671_233475_+|hypothetical-protein
MKVTGQYLARKVYSNNVHFVMLKIDDKKQADLLDTLFKRKAERDARAGHESLLNVSFNLQYREKSYKQLRTVFALVTAIFISMDGRLPTEEEKYALYLDLLDVYALKTPSKIKPDTLRTIHLSESNTFEAAHFINGLMLHLATECDLDLDLQSDVKNLLWEWELHRGGEEKDPLDYYDTECTQLISEADWRELHQYSEASGLHEAIHLHHIVTRGANAAAIDKAWNWCALTSDEHEQLHHYGEKAFLKKYPHLEGKFKRAHRMAGKL
>NZ_CP042816.1|WP_024751739.1|234665_235715_+|hypothetical-protein
MKSNFKSCIFSETTKKQIDAMTDINMKLRFYEAVTNYGIYGIDPDFEGIDLLIWIPMKDIIDNATNKRGAPVGNANAKKANNKTSDSDTEQEKQIKYNETKKLPENIESNSEQKKQMDLIENKENNSKQEKQIKQLNSIKTNKTIRPNDNDNDNVNVNDNDNVNDNVNHPPPEDTAGQDIYTCSDKQEDEEVFSDFSENENLTQLAKDIYGVFVEAGINKPNTFLLFLQRDFQLGLDKLREQAIPVTPDILAACKNYAKVLALKKQQATWWNFTGGFDGFCGKNIILKFLPERFTLTQFEKNNRSPQAEKDYSKQDFSQSSIDEFFGKPQPPPQVVSADVGDELEGVMF
>NZ_CP042816.1|WP_024751636.1|235728_236508_+|ATP-binding-protein
MRVLKQGKWQQVNITQSFLPDYLRQSKALCKTHGEYKCLIDTRTNEASPCPLCEQDRERAELETQKELEQFEARLKKIDGLPKRYRNAGFKNFVVDEKNKTARDSVLSFAKNPNNKWLLLLGKNGTGKTHLAHAVLKLTGGIFRDFDDVSTDLLDAQAGYGAGLNKTLDKYANAPMLVIDEIDKVKNTEGRITWLNTILRRRYNEMLPVVLVGNIDLERLCQIIDLHGGEAMRDRIKELGIVVNFNFESYRPVLRNEKE
>NZ_CP042816.1|WP_148879529.1|236512_236812_+|DUF4406-domain-containing-protein
MKQIYLSGAISNNPNYKQDFETAYNKLHKAGYSAILNPVKFCEGLKTWDDCMRKCLFILSRHKNLGIAKIETPYASNGAELELQIAEALGYEIYERKEN
>NZ_CP042816.1|WP_148879530.1|236815_237142_+|hypothetical-protein
MIFGESYNLIQQAIASHSENKLNKCVLCDCYQAYALMKTHIDEANKHVNRANMEFDYYWEKVKEMKTNEQKRFLKDVKDNAEIIINELVCVIALIEKSEKQIYGGENE
>NZ_CP042816.1|WP_024751671.1|237687_237927_+|hypothetical-protein
MKQLIAATKKHGETVKSIAGQKESTIVGMTLNNRVIIDKSFSQSFGQPYGDKVSCTTEELLDNFVFLSDNSPCGELVES
>NZ_CP042816.1|WP_148879531.1|237926_238886_+|DNA-(cytosine-5-)-methyltransferase
MTYLSVCSGIEAATVAWEPLGFKPVAFAEVEEFPCEVLKQRFPQVPNWGDITKYEEWENEAVDIVVGGTPCQSFSIAGKRGGTNDLRGQLMYCYLEIVGKYKPKWVVWENVPGVLSSGNGLDFASFLAGLEKLGYGWAYRVLDAQYFGAPQRRRRVFVIGHSDNRTDLAAKVLFEPEKPRTSFEASEDKKKEITGTLTTGFGARVFDCDTILNNQFAVESYTLSSFAQYKEGVGTLKASGGDFGGGSETIIKEGNSIRRLTPLECERLQGFPDNYTQIEWNGKPKDQCPDSHRYKAIGNSMAVPVMRWIGERIKRIEGA
>NZ_CP042816.1|WP_024751669.1|238891_239188_+|hypothetical-protein
MSNPKDQRRCALATSGGVCEVCGRPLNEGQPQGAHRIGNTKANRAKYGDFVIDHRLNMGMTCSLKCNGLLDISKDTGEVVKLCKKIYEIELQKYEGQK

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Crispr_ID: NZ_CP042816_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_2

376506-376619

Orphan

Consensus_repeat	Method
GTGGTTCCAAACAGAAACGATGTTTTAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_2

>merge|NZ_CP042816|2|376506-376619|CRISPRCasFinder
GTGGTTCCAAACAGAAACGATGTTTTAAAGCAAAGTAATTTGCAAAGCTTTAAAACTTGTGAGTTAGTTTTAGCCACGGACGGCGGTGGTTCCAAGCAGAAACGATGTTTTAAA

>NZ_CP042816|2|2|376506-376619|CRISPRCasFinder
GTGGTTCCAAACAGAAACGATGTTTTAAA	GCAAAGTAATTTGCAAAGCTTTAAAACTTGTGAGTTAGTTTTAGCCACGGACGGCG
GTGGTTCCAAGCAGAAACGATGTTTTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_044635059.1\|360268_362110_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP042816.1\|WP_148879314.1\|358670_358910_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752712.1\|372038_373307_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179486
NZ_CP042816.1\|WP_148879562.1\|391101_391605_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879310.1\|376778_378017_-\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|376358
NZ_CP042816.1\|WP_024752714.1\|366096_367752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_044635060.1\|359440_360109_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP042816.1\|WP_148879561.1\|368335_371164_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP042816.1\|WP_002694975.1\|367787_368045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752709.1\|380068_380821_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP042816.1\|WP_044635052.1\|383520_384696_+\|RNA-splicing-ligase-RtcB	unknown	unknown	gnl\|CDD\|376465
NZ_CP042816.1\|WP_002695010.1\|380879_382715_+\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP042816.1\|WP_044635058.1\|362166_362724_+\|hemerythrin	unknown	unknown	gnl\|CDD\|226454
NZ_CP042816.1\|WP_148879309.1\|378231_378411_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_044635053.1\|378725_379988_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176200
NZ_CP042816.1\|WP_052335727.1\|389588_390776_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP042816.1\|WP_024752715.1\|363659_365927_+\|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl\|CDD\|225789
NZ_CP042816.1\|WP_044635051.1\|388848_389571_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_002694990.1\|373762_376216_+\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP042816.1\|WP_024752707.1\|385046_386879_+\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_044635059.1\|360268_362110_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP042816.1\|WP_024752715.1\|363659_365927_+\|glycoside-hydrolase-family-2-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	2.13506e-90
NZ_CP042816.1\|WP_044635053.1\|378725_379988_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176200	cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	0
NZ_CP042816.1\|WP_024752712.1\|372038_373307_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP042816.1\|WP_148879310.1\|376778_378017_-\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	5.74603e-50
NZ_CP042816.1\|WP_024752707.1\|385046_386879_+\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NZ_CP042816.1\|WP_044635060.1\|359440_360109_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.40149e-15
NZ_CP042816.1\|WP_148879561.1\|368335_371164_-\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP042816.1\|WP_044635052.1\|383520_384696_+\|RNA-splicing-ligase-RtcB	gnl\|CDD\|376465	pfam01139, RtcB, tRNA-splicing ligase RtcB. This family of RNA ligases (EC:6.5.1.3) join 2',3'-cyclic phosphate and 5'-OH ends. They catalyze the splicing of tRNA and may also participate in tRNA repair and recovery from stress-induced RNA damage.	3.30498e-73
NZ_CP042816.1\|WP_044635058.1\|362166_362724_+\|hemerythrin	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	4.41722e-38
NZ_CP042816.1\|WP_024752709.1\|380068_380821_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.35301e-68
NZ_CP042816.1\|WP_052335727.1\|389588_390776_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.24757e-44
NZ_CP042816.1\|WP_002695010.1\|380879_382715_+\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP042816.1\|WP_002694990.1\|373762_376216_+\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0

>NZ_CP042816.1|WP_002694990.1|373762_376216_+|glycogen/starch/alpha-glucan-phosphorylase
MNLTKEELQNSVIRKLKRNFSKDISQASQRELYDALASTIAEQLQTNWMATRKLHAKEKIRQMYYFSAEFLMGRALSNNLINSGLKQIVVDLLNELPFGEYTDIEEEEPDAGLGNGGLGRLAACFLDSLATLDYPGHGYGIRYRYGMFEQRIENGEQVEYPDKWLAFRDPWEVRHAELAVKVYFGGQSVCRQGDDGRLYYSLEGAEEIIATPYDMPIVGYDTKTINTLRLWEASSRDGFDLQLFNNMEYAAAVAKENAAEDISRVLYPNDSGPSGKTLRLKQQYFFSSASLQDILRSFVHKHGNDFSKFPEYTVIQLNDTHPVVAIPELMRLLIDEYYLDWDVAWEIVTKTFAYTNHTILSEALEKWPIEIFQTLLPRVYQIVEEINRRFLTLLREKYQGNWQKQNEMSIIGGGKIRMAWLAIVGSFSVNGVAALHTEILKTKELADWYNLYPEKFNNKTNGVTQRRWLLSANPSLAEFITKHIGTDWILNLSELKKLEPLADNEDALKELIAIKHSNKKRLADYLKKTQSIVISPDSIFDVQIKRLHEYKRQLLNILYVMTEYNKIIENPNYEPFPKTIIFGAKAASGYRRAKMIIKLINTVADRVNNDHRVKGRLQVVFVENYRVSAAEKIFPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTMDGANIEIVEEAGAHNAFIFGLTSEQIAEINQKNHYSPHEYLNKNPALAKAVNQLIDGTYTAPHENTFRELHDSLLYGVEGQRPDVYYVLADFDSYAKAHKDIEEVYRDPIKWARMCMLNIARSGKFSSDRTIEDYVQDIWKLKKIHID
>NZ_CP042816.1|WP_024752712.1|372038_373307_+|glucose-1-phosphate-adenylyltransferase
MSKVLSIILGGGKGTRLYPLTKERSKPAVPFGGKHRIVDIPISNCINSGFRNIYLLTQFNSASLHLHIAKAYIFDSFSNGFVEILAAEQTFDHSGWYEGTADAVRKNFTHFKTQKPSHYLILSGDQLYRMNLKDFLQKHEESGSDITIACTPVNRSDASGFGIMQIDKNSRITSFMEKPGATKNIDEWKIPENSKLGSFGEKEYLASMGIYIFNTEAMEGSLANNMTDFGKEIIPMAIQKYKVSAYVHTGYWEDIGTIRSFYEATFDLTEIKPQFDFYDAVMPIYTHNRNLPPSKINAATLDNATCSEGCVITSATIKHSVIGIRSIIESDSILEGVVCMGADYYETEAEKEEKRKKGTPCIGIGSNCRIKKAIIDKNACIGNNVSIGMGEVPPDGDYDYYHIVDRIYVITKNAIIPDGTII
>NZ_CP042816.1|WP_148879561.1|368335_371164_-|DNA-polymerase-I
MKDDVVFILDAYGLIYRSYFAFVGKPLTNSTGKNISAVFGFFKSLYTILRDYEPQFFAVAMDSRVPTFRHEMYSEYKATRDKTPEDLHAQIPIIEEILTALGITLVRKDGFEADDVIASIAKCASADNKKAVIISSDKDLMQLIDDKITMLKPNKADAWIAFNADDVKEQWGVPPNQMLDFLSLIGDTADNVPGVKSIGPKTAAKLLDEYGSLDGIYAHTDSLKGAMQKKIIEGKENAYFSKKLIALEDSALEKCVLSDFACPVLDYAAAAKIFLREELPSLARQYAPNADFVKTDEAFLVRSADPKKEKKQGANSAGANPITTSPLQEIASASGGFKKNAGNYRGITEPEELRKLIDAAIAQGFAAFDCETTGLNPLEAELAGFSLALKAEEAFYIPVKLLPAELQSQAPQPMPLEKAVSELARLWQQKNLTIIMHNGKFDYQAMRTAGVFEKTPCAIFDTMIAAWLLDPDRTSFSLDSLASSLLKLQTIAYKDVVPKGKIFSDVPYEQAVAYAAEDADITLQFYEFLLPKLKEYGLFDLFQTLEMPLLPLLAEMEIAGIFLKKEELAEFSEELGKEIIVHEREIFDIVGHEFNIASPKQLQEVLFTELKLPTGKKTKTGYSTDTSVLEVLASEHVIPAKILEYRALTKLKSTYTDALPALADKNGRVHTSFIQTGTATGRLSSRDPNLQNIPIRDEAGRRIRKAFQAEKGKNLISADYAQIELVILAHLSQDKNLVQAFQEGTDVHAATAGLIFGVPIGEVLPDMRRIAKTINFGVMYGMSAFRLSNALRIPRRQAADFIETYFKTYSGVHIFMEELKESARRKGYVETLMGRRRYIYAINSANKLEQAGAERVAINTPIQGSAADIVKTAMLKVQNALQAHKLQAKLLLQVHDELICEAPEKETETVKTLLRQEMESVVKLLVPLRVNIESGKTWGDFH
>NZ_CP042816.1|WP_002694975.1|367787_368045_-|hypothetical-protein
MGTPSLFQILKNVLFSPEVLFVTVIIILYLNLVFYVVYYRKTHSKINRRIHKMRMAAKNTKQTAQVEEKEETETEPPKKRAATVR
>NZ_CP042816.1|WP_024752714.1|366096_367752_+|hypothetical-protein
MSVIKFSIKNKKLCISMDTGMSSRSFAQSRQKDCFSEKGFILRDARVIPFQFEKTELGIRNGKESVFLTAELSLPELEYEESVNVQTLYANILQHLYEKNTDNLISKSDIQAVQNVLEIFSRILFAKEEISELFLTELAAAGTQSIAFLKETIILLPPITTKNCLMAQPKAEKLDYLSAVHPFAEKVLLKESFGFLIAGTLYYLLCGNSAYGKGIKNENTLSENMLDSFFDPPNTLIQNISQNDSDLLSFFLKVKKNKKEKENLVAFFGRLFSLPERLEKNQENLLQDREAFYLQRERILQQQQKSIQKKRFLRKHRTKLTVGFFAFLTLSLIFASIIYKQNSAPDTKGLTSLQVVEGFYTAVAELNQEISSAYATRNGGGKYESLMMNLYVIKKTREGYEQRKIYFTPQELAVLCDKIKEKQPSASFEEFCHAVKKIMQLGSVYGITDLKITVKEENPSQTVFDVLFFYWLPTPSDAQSKLSAEDPFSPKLEEFGFPVQVYHKHDTVCLQLYKDRWLISSIDSQERLVAEDGKNILKAFFKESEKADYLP
>NZ_CP042816.1|WP_024752715.1|363659_365927_+|glycoside-hydrolase-family-2-protein
MSRTIIPLWNNWLFKKDFNNSDIRKDIATDDFTPVGIPHMVQEIPYNYFDERNYQCISCYRREFAVDESMRGSRVFIDFEGVMAAATVYINEKEVGTHKGGYTPFSFDITDYVLYSKSGAADNLLVVEVDSTERADIPPFGFAIDYLTYGGIYREVCLRFVPEVYIKDVFFQPLDSDKLEKKLLANIEFENTGAENKDITYSLVLKDMQDTIIAAVTNSCIAAAGTSFQRAVLTDLQDIQVWDIENPQLYRAELCIVSDTSRDEDIISATVGFRTAEFTPEGFFLNGKQIKIRGLNRHQAYPYVGYAMPKRAQQDDADILKHELGINLVRTSHYPQSKHFLNRCDEIGLLVFEEIPGWQHIGDEAWQDVACKNVEEMILRDRNHASIVLWGVRINESPDSHNFYLRTNEIARRLDPTRQTAGVRCHANSDFLEDVYTMNDFICGSVQPDTLRDRALRPQREITGQADLVPYMVTEFAGHMYPTKRFDQEERLVEHATKHLMVQNTAALNPHICGAIGWCAFDYNTHYNFGSGDRICYHGVMDMFRIPKFAAAVYASQMPPSKKAILEPLTRYTIGERSIGGIAPLMICTNCDSVRVVIGEQDLGLFYPSKERFAGLEHPPIIISQIEGVWGGGWLDAAFIGYVNEKEVAIKRFACNPTAVDLAVHSDHTELSAYEPDTTRITVKLTDRFGNELSFSDAIIKVQLEGPAEIIGPKEFALIGGVRAFWIKTKFESGTVTVNVASEGFKTKQITIQVT
>NZ_CP042816.1|WP_044635058.1|362166_362724_+|hemerythrin
MDSIELMIKEHENILKFISVIRKACCRILEGAPVPVEDFTAMISFARTYADTHHHGKEEEILFHNMIEHIGQPATGLIQHGMLVEHDMGRFFISRLEEALTRYAADPNTENKLDIIMYSAGWADLLTRHIEKENKVAYVFARRELPPEVLHNIDKKVQVFEQEAAHRNVQEKSLQLLKDLTAKYC
>NZ_CP042816.1|WP_044635059.1|360268_362110_+|hydroxylamine-reductase
MENKMFCFQCQETAGGKGCTLSGVCGKKPDTAAMQDLLMYVTKGLSVVTTQLRAERKTVAADVNHTVTQNLFITITNANFDNEAIITQIQSTLKLKEALLSQIEKKESLPEAALWNEDVSTFAKKAVDVGVLHTKNEDIRSLRELITYGLKGLSAYSKHANALLHDNDEVDAFIQQALTKTLDDSLTVEDLVALTLETGKYGVEGMALLDKANTSTYGNPEMTKVNIGVGKNPGILISGHDLRDMEMLLKQTEGTGVDVYTHSEMLPAHYYPAFKKYSHFVGNYGNAWWKQKEEFESFNGPILMTTNCIVPPKESYKDRLYTTGAAGYPGCKHIAGDIGEEKDFSPLIEQSKRCSPPTEIESGEIIGGFAHHQVFALADKIVDAVKSGAIKKFIVMGGCDGRAKARNYYTEFAKALPKDTVILTAGCAKYKYNKLDLGDIGGIPRVLDAGQCNDSYSLAIIALKLKEVFGLDDINKLPIIYNIAWYEQKAVIVLLALLYLGVKNIHLGPTLPAFLSPNVAKVLVENFGIAGIGTVEDDMQLFFGNDEAKPAISADMLIGSIVRKFPEAVPVLIAQGMHCLGCPSAQTETLANACLVHGLESESVVKALNKSLH
>NZ_CP042816.1|WP_044635060.1|359440_360109_-|Crp/Fnr-family-transcriptional-regulator
MDFFMLSNTILFRGITPEEIKNVLLCLGGKQKHFTKEETVYRAGEQVSALGIVLSGSVIIENNDVWGNKTVLDKLGIGKVFAETYACSEKETLMVDVVATEDTDILFLQTKPLLTLCPQTCAYHTKVIRNLVSLLAQKNLHLSHRMFYVSSKSIRGRLLSYLSHQAAQNSSWEFTIPFNRQELADYLQVDRSALSNEISKMQKEGFFTVNKNQFSITLKEFF
>NZ_CP042816.1|WP_148879314.1|358670_358910_+|hypothetical-protein
MFQKDYKDKRSQAIQGKINRLEQFFLAEYIQPKLNGRRSDKRGTYNKKLDQIIVKKAEKEKRKIGLDDITLDDFEKYKP
>NZ_CP042816.1|WP_148879310.1|376778_378017_-|class-II-aldolase/adducin-family-protein
MKEISAKEINESIRGLQSGNIAVNLQSIFIKTAENAFITVAPHSSEQEITASDLQKLNSKQLQRTNNTVFRIFSHHADISAVIACSPKFCAVAASCYKRIPPVLDDMAQIVGVYAEVVELEDQNRILRLFKKNHALIIKNNADGIGAIAAGRDLAQAAAAALILEKSAQVFIEAQYLGGAKALHWFNAKRMNHGYRTKYSKMNTNVRHLSERDYSRKIAADELELRAKIVEMGKQLVRENLMQGTWGNISVRLNNHQMLVTPSGIDYFSLSPYDIVLVDLESLEHEGSLKPTSEKLIHADSLKKNKDINCIIHTHPLHCGAYIAAHKPLIVTAPEIKSILKGNVAIADYAASGTKKLAENILRAIKENSACFMANHGLVVCGSSLEDALKKCRTIEAYARSELDKLLHTGNA
>NZ_CP042816.1|WP_148879309.1|378231_378411_+|hypothetical-protein
MVNCSPLLNSKRCLKASTLFCKIEAFKLAGLVFATDVKTVFKHSCGKFAHRCAVSNSFL
>NZ_CP042816.1|WP_044635053.1|378725_379988_+|zinc-binding-dehydrogenase
MKVKAVRLHGANDLRLDEFELPEITDDEILVKVVSDSVCMSTYKCAILGTEHKRVHPNVADHPAIMGHEMAGDIVKVGKNHQGKFKPGMKFTLQPALNYKGTMWSPGYSYEFFGGNATYCIIPAEVMELGCLLEYKGKAYYEASLAEPMSCSIGAINACYHTKMGVYIHEMGIKENGKLAILAGAGPMGLGAITYLLHRDVRPSMLVVTDIDQERLDRATELFPPAEYMAKGIELHFINTGKMDDPAEELIKITGGTGFDDVLCYAPVEAVIELSSAVLGRDGCLNFFAGPTDNKFTARINFYDVHYNSTHVLGTTGGNTDDMIESLELTAANRINPAVMVTHIGGLDAAADTILNLPNIPGGKKLIYNHLNMPLIALTDLRKKGAEDERYIKLADIVDAHKGLWCLEAEQYLLENFIDE
>NZ_CP042816.1|WP_024752709.1|380068_380821_+|DeoR/GlpR-transcriptional-regulator
MEERRNKIITFVNEHGNITFNELKENFPHVSEMTLRTDLKVLDKEQRLVRIHGGARSLDKVVGNDDFLKKRFIQNTKAKKIIAKKALEFIESNTTIFLDSGSTTTMLAHILEDKPNIFVTSGLTCAIEIARLERAKVVLSGGNINRHSLSVNGIEGIRYIEKINFDIAFIGVTRYSKETSFTCESLEDAELKQTVIKKSRKVIVLMDSSKINQRGTYTICNHNEVDIVISDNELPEALKHEFRNRGIAVY
>NZ_CP042816.1|WP_002695010.1|380879_382715_+|PTS-mannitol-transporter-subunit-IICBA
MKATLQKFGKQLSAMVMPNIGAFIAWGFITALFIPDGWIPNEQLASIQPYMLAYLLPVLIAATGGKMVAGERGLVMGAIAVVGCIAGAGGVDGKPMLMAAMIVGPFAGWVIKQFDAFMENRMPVGFEMLINNFSIGIIGMLISFIGFYLIGPFMTGVLAVLTAGVNVLLKYSLLPFVAIFIEPAKVLFLNNAINHGMFTPIGVEQAAQTGKSIMYMLETNPGPGLGVLLAYWLFAKDKATKDSAPGAIIIHFFGGIHEIYFPYILMNPFIIIAPILGNLAAISFYLIFGAGLKGPASPGSIIAFLSMAPKGSTVIALLGVVIAAGISFLIASPIVKLTSTKDLEKAKKKVKTLKAQSKGEVDRIKKIVFACDAGMGSSAMGATKFKNRIKASRPDIIVTNTSVDNIPGDSDVVVVQAVLAERAQKSAPQAKLITIENFLADSALDDLFFELSTGDAMVSKNTENKKTETPALKDVITIDGILLNQKAKTKEEAIRAAGKLLHKLDYVEEAYIDSMLEREKIATTYMGMGLAIPHGTTHGTETIKKSGIVVLQYPDGVDFDGELAYFVIGIAGIGGSHMDVLSKVCTALEDESVLEKMRNTNDKEWVLQQLS
>NZ_CP042816.1|WP_044635052.1|383520_384696_+|RNA-splicing-ligase-RtcB
MKNYKIFAESIEEEAKRQVEELSRQEFAKNSKIRIMPDVHAGKGCVIGTTMTIEDKICPNLVGVDIGCGISVFELGKIEPINFHKLDKVIRENIPSGSAIRKDERISKELKERLSTLTCANKINLEREYFSCGSLGGGNHFIEVNKDEIGNIYLAIHSGSRHLGTAVANYHQRKAIELLTSQNKAHKELIAKLKSERREKDIAAELVALPKQTHIPNELAFLSGEHTKNYLHDMTITQSFASENRKIIGEIILEKMNLEANDSWESIHNYVDIENKILRKGATPAYKGQKVIIPMNMRDGSLLCIGKGNAEWNFSAPHGAGRLMSRSAARSKLSFDTFKKEMSGVFSTSVSVCTLDEAPMAYKPMESILRQIKDTVHVTAIIKPLYNFKAP
>NZ_CP042816.1|WP_024752707.1|385046_386879_+|oligoendopeptidase-F
MKSTTPKRADIAKENQWKLELLFESEQAWQSALQEAIKSGERVLLYKDTFENPAEVESATLLNCLQAFETFEKQSEKLGQYAFLKKSEDEGNSENIARLSQYIMAMTEISAKLSWFVPALMQIPEDKVRAWIDPSGAEGKAFADYKIFIEKTLYLKVHTLSDREEKMLTLLSESGGTAQRSFSVLTNVDLQFGSITDRGEEKELTQSSFSQFLLSPDRAVREKAYKQFYAGFDAHKNTIASLYIGQVQQNTAMAKIRGYGSARENALYPDKVPVSVYDNLIKSVRDNLEPLHRFYALVQKTLKVEELRHYDVYVPLVAEIRKHTEYTEAVDIITEALQPLGGEYVNTIRSGLLGGWVDRYENQGKRSGAFSSGGFESEPYILMNYKPDVIRDVFTLAHEGGHSMHSWYSVRNNPFLCHDYTIFEAEVASTFNEELLFRSMVKKASDPKERAYLLSIRASDILATLYRQTMFAEFEMITHQLVESGTPLTLDRLRAEYKKLLTAYFGPAMHFEEVSDLECLRIPHFYRAFYVYKYATGISASLALAERVLSGGETERNDYFNFLKSGGSRYPIEALKVAGVDMASPEPVRAACNHFGEIVTELEKALKTIL
>NZ_CP042816.1|WP_044635051.1|388848_389571_+|hypothetical-protein
MSSKKEYADFPLDPHKKKMLAVNIKTLFRILTFTTLVFLIASLDMIFAVRAAKTKLLSAWMQEKNLMAASEELRQSSEDLTRLCRVFAANEARKYEDEYLAILNWRNGKTARPAKAANSLYAGKTISQYDVFKELGCTKDELALLTAATKLSDVLALREAQAMETIKQKKYVSGPAAIFDGERYDDFAVRILHDEEYHNQVTKIMQLIDEFCMLLADRTHAVISATNRMADTYLFLTVVL
>NZ_CP042816.1|WP_052335727.1|389588_390776_+|methyl-accepting-chemotaxis-protein
MIFFIWFLTTAVIHPILKSSDVFSYLGTGDLRKELEVKSNNEIGRMSGSFNTMLSNIKKLIFSIQKNANNLLNLGEELASNMTETAAAVHQISANIEGVKHQTMTQAASVTETAATIEEIVRIIRQLNKSIENQSASVAESSSSIEQMVMNIQEITKFIGHANETIEGLNTATAEGKESVSVANTISQKITEESGSLLDASSVIQHIASQTNLLAMNAAIEAAHAGDSGKGFAVVADEIRKLAEESNSQGKAITATLKTLSSEIETLANSAKNSEEKFNTIFELSERVQEISNNLISKMQEQEIGSREVLKAIQDINGVTVEVKNGSTEMLLGGESVAQEMQKLDSLTRIISDSMNEMASGAVQIDKAVREVNEITQKNKQSIADLTTEVEKFKV
>NZ_CP042816.1|WP_148879562.1|391101_391605_+|hypothetical-protein
MVRASGKKRQDDLDFCFISLWISFNAIYADDLNEIGDRSAVTGFLKKLSDLDTDKLLYALVWDTFSDNIRILLNNQYSFQPFWDEYNKPKTTTANSWEERFESEKKKVTKAMGTQNTAHLLTIVFRRLYTLRNQIIHGGATYNSSTNQSQKKKLADFCLLLFLQLLT

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Crispr_ID: NZ_CP042816_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_3

770905-771054

Orphan

Consensus_repeat	Method
CTGCGTGGAACCACCGCACGGTATAATTTTGCCGTCCATGGCAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_3

>merge|NZ_CP042816|3|770905-771054|CRISPRCasFinder
CTGCGTGGAACCACCGCACGGTATAATTTTGCCGTCCATGGCAAAAACTAAACCACGAGTTTTAAGAGCACTTGGAAAAAATTTGTGCTTTTAAAACATCGCTGCTGCGTGGAACCACCGCACGGCATAATTTTGCCGTCCATGGCAAAA

>NZ_CP042816|3|3|770905-771054|CRISPRCasFinder
CTGCGTGGAACCACCGCACGGTATAATTTTGCCGTCCATGGCAAAA	ACTAAACCACGAGTTTTAAGAGCACTTGGAAAAAATTTGTGCTTTTAAAACATCGCTG
CTGCGTGGAACCACCGCACGGCATAATTTTGCCGTCCATGGCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_002696680.1\|755639_756998_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP042816.1\|WP_148879610.1\|759087_760794_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|223343
NZ_CP042816.1\|WP_044634438.1\|768141_768894_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226963
NZ_CP042816.1\|WP_148879611.1\|771321_781380_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752211.1\|767101_768145_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_CP042816.1\|WP_024752213.1\|769460_770699_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP042816.1\|WP_148879612.1\|785603_787379_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|227321
NZ_CP042816.1\|WP_024753117.1\|787365_789030_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP042816.1\|WP_148878568.1\|789122_789389_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024753114.1\|782786_783530_-\|copper-homeostasis-protein-CutC	unknown	unknown	gnl\|CDD\|225684
NZ_CP042816.1\|WP_044634615.1\|789749_790511_-\|LPS-export-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213185
NZ_CP042816.1\|WP_148879198.1\|762990_763716_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379256
NZ_CP042816.1\|WP_024753115.1\|783592_785071_-\|M81-family-metallopeptidase	unknown	unknown	gnl\|CDD\|377823
NZ_CP042816.1\|WP_148878587.1\|763724_764237_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752208.1\|760807_762613_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP042816.1\|WP_024753120.1\|790621_791410_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224369
NZ_CP042816.1\|WP_002701359.1\|782060_782609_+\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238494
NZ_CP042816.1\|WP_148879613.1\|791406_792009_-\|LPS-export-ABC-transporter-periplasmic-protein-LptC	unknown	unknown	unknown
NZ_CP042816.1\|WP_002698061.1\|766100_767105_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226965
NZ_CP042816.1\|WP_052812492.1\|757064_759101_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_002696680.1\|755639_756998_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	2.27199e-70
NZ_CP042816.1\|WP_148879610.1\|759087_760794_+\|trypsin-like-serine-protease	gnl\|CDD\|223343	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].	3.3869e-52
NZ_CP042816.1\|WP_044634438.1\|768141_768894_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	1.39374e-129
NZ_CP042816.1\|WP_024752211.1\|767101_768145_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.68345e-98
NZ_CP042816.1\|WP_024752213.1\|769460_770699_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	4.04346e-35
NZ_CP042816.1\|WP_148879612.1\|785603_787379_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP042816.1\|WP_024753117.1\|787365_789030_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.04389e-116
NZ_CP042816.1\|WP_024753114.1\|782786_783530_-\|copper-homeostasis-protein-CutC	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	4.10076e-78
NZ_CP042816.1\|WP_044634615.1\|789749_790511_-\|LPS-export-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213185	cd03218, ABC_YhbG, ATP-binding cassette component of YhbG transport system. The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.	3.70443e-140
NZ_CP042816.1\|WP_148879198.1\|762990_763716_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	1.05522e-08
NZ_CP042816.1\|WP_024753115.1\|783592_785071_-\|M81-family-metallopeptidase	gnl\|CDD\|377823	pfam07364, DUF1485, Metallopeptidase family M81. This is a family of proteobacterial metallo-peptidases.	6.61156e-117
NZ_CP042816.1\|WP_024752208.1\|760807_762613_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP042816.1\|WP_002701359.1\|782060_782609_+\|isochorismatase-family-protein	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	1.94768e-49
NZ_CP042816.1\|WP_002698061.1\|766100_767105_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	5.71106e-121
NZ_CP042816.1\|WP_024753120.1\|790621_791410_-\|hypothetical-protein	gnl\|CDD\|224369	COG1452, Imp, Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane].	5.39775e-05

>NZ_CP042816.1|WP_024752213.1|769460_770699_+|OmpA-family-protein
MRICFKKILAVLLLVLNTAVMQAEIFRFKFKDGESYRINSLVIEDVFVNNFFSHTAEITNRITVDISDVKPESAENRLSALHTCTFMTSERNLHKTFRWGRNYESVFRRDDLGVYTIEPKYFMPVVRNVPVFPEKDLKPGDTWEFEGEEAHDLRDGFDIQTPFRVPFTVAYTYKGEIEKGGKKYHHIIAEYNLLYNVPPQLIAKNQHKLPTLYPVRTIGYSKQDLYWDNEAGNLPKYTETFKIQLMLNSGRTLTYEGTASAEITETKKLDKAAVAEDLTQKIEELGIENTTISQTDEGITISIENIQFEADSARLLSSEKEKLQKIGRLLQDFPDKELLISGHTALRGTAAERQKLSEERADSVARYLEEIGIRDTQHLYTRGFGARRPLAPNTNEENRARNRRVEITILEK
>NZ_CP042816.1|WP_044634438.1|768141_768894_+|ATP-binding-cassette-domain-containing-protein
MIEVKNAKKKYSKEVQIGPLTINIPEAGITSLVGPNGAGKSTMLLMIGRLLGLDEGQILVAGLDTVSANSEALAKVLAVLRQENLFVTRLTVRQLVGFGRFPYTKGRLNKVDEKIISKYIDFLGLTDLENRYLDELSGGQRQRAYVAMVLCQDTDYLLLDEPLNNLDVSRSVQMLTHLRHAADEFGKTIVMVLHDINFAARYSDRICCMKEGRIVEFGTPAEVMQGEKLSKIFETKIEIIQGPYGPIAIY
>NZ_CP042816.1|WP_024752211.1|767101_768145_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTNNNLTQTCLHNGKRSAKAFRSAKEQRHYFYILFAFFALGLLASYGLLVYKNPVPVSSPSFLPVVKRRMIAVTAMIIAATCHGLSTVAFQSVTNNRIITPSLLGFEALYSAIHTSTIFFFGITGLMQFTGIYAFIIQIVIMVGVCLLLYGFLLSGKYGDLQLMLLVGVILGTGLRSISAFMRRLLAPSEFDILQARLFGSVNNADPVYFPVAIPLVLVTSILLLFYSKKLNALSLGRDVCTNLGIPHKRCVIYTLILVSILMSVSTALVGPITFLGFLVAALTYQIAPTYDHRYVFPMVLAVSYTVLTGAYFLMYHVFSAQGVVSLIIELFGGLAFLIVILRKGKL
>NZ_CP042816.1|WP_002698061.1|766100_767105_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTTQPTVEAEKPQRFDRKLWTPAFFIAVVVIIALGVASLFTGVYDIHGQKDGWQMFFITRVPRTISLMLTGAAMAMSGIVMQLLTQNKFVEPTTTGTIEWAGLGLIFVYVTIPGPTLMQRMTGAIIFSFVGTMIFFLFLRKVRLRSSLIVPIIGIMLGAVVSALSTFIGLVFSMTQSLEVWFAGSFASVQRGRYEYLWIIIAITVVVFIFADRLTVAGLGEDIATNLGLNYNRIILFGTVLISLAVGIVAAVIGHLPFLGLVVPNIVSMFRGDDLRSNLPWVCVLGMGTITLCDIIARTIIMPFEVPVSLILGTIGAAVFIGLLLKQRRRKIKR
>NZ_CP042816.1|WP_148878587.1|763724_764237_+|hypothetical-protein
MFPAHSSQAKGRVERLWQTLQSRLPVEFARRGITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNNLFKIEQNKFAAGAMVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP042816.1|WP_148879198.1|762990_763716_+|helix-turn-helix-domain-containing-protein
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGIYSPKKRRTRKKVHKTRERRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTKEHNSAKLSST
>NZ_CP042816.1|WP_024752208.1|760807_762613_+|elongation-factor-4
MFNPDNIRNFCIVAHIDHGKSTLADRLIEKTKAVSERAQRAQMTDDMDIERERGITIKSHAVRIPYTAQDGKAYILNFVDTPGHVDFTYEVSRAIASCEGAILIVDASQGVESQTLSNMYLALEHNLEILPVINKIDLPAANIPEVLHQIDHDLGLDSEQAVPVSAKTGQNIDALFEAIVTHFPPPTGSDNNPLQALIFDCNYDPYRGVIIHVRVFEGVLKPGMTIRFMNNKAEYKIEETGVFVFALVATECLHAGEVGYIIAGIKTVSDVGVGDTITDANAPCAEPLAGFKEIKPVVFSSVYPVDTNDYEELRESFEKLKLNDASLSWEKDSSLALGHGFRCGFLGLLHLEIVQERLEREFDQSVIFTAPSVRYQIHLRSGETIICDNPADYPDETKIASADEPYIKAMVITPTEYLGNIMSLCMEKRGVQAGMNYLDEKRVEMIYEMPLAEVLFDFYDRLKSVSRGYASFDYELIEMRPTDLVKIDILINGKSVDALAQLAYRPNAYKKASHVCAQLKEEITRQQFKIAIQGAIGNQIISRETVNALRKDVLAKCYGGDITRKRKLLEKQKEGKKRMKMIGDVELPQSAFLSVLKTNTD
>NZ_CP042816.1|WP_148879610.1|759087_760794_+|trypsin-like-serine-protease
MTKYKRNILSVFFCTVLIISCKNFDTVQSTRDFSKTASINYEISLARKNFADKPLQGLCRAKVLLQNTSDNADVLNLYRDAVQNAQKAFLSAAEKKDWYTALIFYQSLQSLGEAPQNWTEEKIRTAQKATWKELHRDILLEIFEDTKATPQDEAPSIQTVAKMIKGTTTVWVDKGIRVEKGRGFSDKILGSGFFIDKRGYFITNYHVIQSEVDPEYEGYSRVYIKPSANKNVKIPAKVIGWDSIFDLALLKTEIEPEVVFKLGSSEGLSIGSKIYAIGSPAGLDKTLTSGIVSAKNRKLFSLGDALQIDASVNPGSSGGPIVDEKGNVQAIVFAGLESLEGLNFAIPVEFLKLILPDLYRGGKVEHSWLGAFGQVLAPRALSNTKGVKLLYTIPGCPAALAIVPEQSIITAINDTPIDTIEKLQQELLHYSPDTIIKISGYALQDKNKPDTIDSYVKKDWFVQTAARPEFPVKLIYEKDLSYRAFTPLFGFEFGSTGKKNTYRVERIVSGTFADENEFTQGDVIEIQRVRINEENKVVIADVYAKRRKAGYFDSFMQFGQYLDNPLFF
>NZ_CP042816.1|WP_052812492.1|757064_759101_+|hypothetical-protein
MKRLLRSVFVVFFILGISFVSAQDSAQAVNAAAALKHLQSAAENCAQQKWQEALFQAQLGSVYDAKLADLPYIEALCYTELGYTRAAAIERAELASSLGMMWRLYDATAINILLAKLYTETLRYDEALAVLADIPYPSADSDFYTAVALYGLKRFSQAEDAIVSSLNRWAFDSRFPKLFFLQEKDRTPSAKAKRIASDIISKLYVWQDSDPEVLLYAVDFEPNTKEAVRKLKIYLNMYAQNNSTQEPYAQAFSILAALKYGIINEKTAVERFFNLTLPFKFADSQETPYRFFFTDLLVDFCKLIGDSNLRKQMAADLSTFNGVLVTDDNRDGIISSKILYTSGRPQLAEFDTDQDGIAEYTIDASYGTPTKIIGKAGAYEVDYDTYPWINTVKTKKGVYTLRPVSFAWKPVEQRSLNINLFSLTKKYTDFFTLKTKNVSGLSERELIFAAAYYEYSDDMIEGAITKTYFDKGVPISSETRINEIPYSVLYYVNGRPSQKKIDRDGDGYFETIEKYSPKGKLQIVLTDINKNKLYEYSEEYLTNGDITKKWDNDEDGTPEIVYTQFKSGNAQCRWTHPVTRQKVIVEYKQTIPAKLTANDKAEAIIKDTKFPLYWIRKPPVFSETITKKILEVFNETKAPVVSYFVEVNTVPFFAVRSGGYIFVEQLEEMQNEPDNDKI
>NZ_CP042816.1|WP_002696680.1|755639_756998_+|tRNA-lysidine(34)-synthetase-TilS
MADSLLDAVLQNLSSILKVKKTYRLLIAVSGGADSLALLTALHTINTDFNHRLFVVTVNHNIREKNETKADADFVSSFCAHLQPPVPCIVKTIPAGSVKELASIRKTGTEDAARILRYRAFEEAAIEVSADFILTAHNKNDMYETILMRLFQGGSPKSIAGIPLVRGKYLRPLLTVERASIEAFLRQRNIFWREDKTNFEQVYLRNKIRHTLIPVLHSVFVGWQSGLDTAIARIKADSDYCDTLLEKKQKKANKFWQKYRDASLSLDYAFFTSFPLPLRIRLIQQACNLLEIHKRIPFASIQRLALYSGKKTVQTSGIKLFREKDLLIFSKADTHIAHSQKMGYLLWIEKTGNYKSPIGIFEIRKKSTGIFIFLNPDYEGIGPFPLPLCIRSWLEGDMLTIKGGKKSIKKLFTEWTVSLAHKENMPIIEVRGTVRAIYGKPFGYKNRFSENN
>NZ_CP042816.1|WP_148879611.1|771321_781380_-|hypothetical-protein
MKSHLKLKWKLLLLITLLSPVFFTCKGNVGLGSTIDITPPTVRIDSPEAAGAPVRGSFVIKGKAEDDTQIKSVHVMLLDSNGGLKSSGHAELSDKSGASRSTAKDVREWWILFENKMEGGKHVLPDGEYTIKVDVVDESGKTATTTTKFTIDNTPPVLVLHRPSTVMSSETPDRYGKDLWLEGMSADDSGVSKIVMRAYADKEGTTLLAEKTLENVPPTVEIKVSSHNGSNNGNKKDDFYNTIYNKRGKNPVYCTIEIFDNAKQYTKEGASGEGNSTTSYYLYAPLYDEVFSLVNTNDIYRAFAGFNIAEDKGLDKGKIISLLSKDNAAVSEAFKANGKEKGSFTLDPDASPEYELLGFQAVAEDAGVDSYNTIGKGSTITVQLSAGLDKAPLDKNSFVFCYMTKETYEKYRKDPALQSFGQTPESLFKDNSKKEIRDGIIQLDAKLTPQGTSYIATYTFKDKELKVNHPYVFIAAGREKKGRNKLGNQLRMKTETAGNCIYGFKVAGLVDIEPPRILPEYPQEGVLFDPAKKISAIIFDASGIQEAKVHYRYGNGEEKEALLSPESGKANMYTAALPAADLKEGQYEVWFTAIDKAEPPNTNTGANSKITVTYDKEDPDIKNVQVNGTAISNGGKLNVKSNDIHITGEVIESYGLEYLKIKGEGVAVPRHNDAYSFDRTLSLDDGDHFIKIEAKDKAGKVSSIEFTLCVDTTAPTFDEMKVAEQSANNGSSLISNSQVVTITGKVTDGTNSSGIDVVEYSLDNRATWRSLVGTREQNGIYIINDFVSVNIGGAKTIHLQAKDYAGNKTEQWSCNVTVTSNIPTITLEVVPPTAGNSKTFERNGLVYLKGTTNIQIYGQMEGASGAESLEVTLKKDSISADLDVLFAEPNKVRDLKIQPNNNGLAASLFAVKTGSKDGEYRITAKQGTHAKTVKLIIDNTPPKVESRVPFYDPASSTEVYKFNSLQKFYGTITDGSSGSGVKSITAKIDGADHELIRTGGAWESKEVPSIKEGNHMLVLNYEDNLGNKGTQLEIPFVYDKADPKISDVNIGANTIDNGGKINVKSNSITIKGIVTETNGLEYIQAKDGTNTKKATLVGQLAPDGKNNFSFDFTDLVEGEHPFEVEAKDKAGKNSERFAFKVFVDTKAPKRMDIKTDDANGEINGTDLLATSSTVKISGKVKDDAPSSGIDVVQYVLTDTTPDWTKASSFSLKGISAELDFEGYVQLEKGKKLHIRALDKAKNPSELQSYTVTLDTEPPKVTRLEVAAVTSAQHTQVIPATATEPYYGKGKLQVNLTVSDDTGVQSVMPIIKKDGIALSEADSKGFFANFDTDFKKAVDANSKEPAIQLTIKDGTQDGTYEIGFKIEDKAKPKPWEKSETITLVIDNKEPVLTPIVPVEGQPFSNQKVAFNGTISDIGSGVEEDSFTYEVKDSNGVVVSATPITITGSSWKIDGVNLGTKEGEKTITFKAKDKLGNPTEETKTVYYDKANPTLTEVKVNNQQGNLVYVKKDVSTPQAETKVVITGQATDTNKMQKVAVFEGAEEKGTTAGDVDGDWSIELAVPGTLAEGIHNLTIKAIDIAGKETIAKKTVVVDTTAPKLDITTLGDKTILSNDFSAFSSKWIGIKPITVAGSAQDTGTDPAGIDRVEYAFKKGTANIPNDAWRLLNLTSTANNAYSFNEEFAIPSDAVALHFRCIDKAGNVTELTPIALQIDSTPPQLEVTEIDGKAGYKTAVTVSKKDISIKGAVTDLNAANQKESGVAKVVWALDGSAEKEGTVSQSGDEWAVSIPKPKMKAGMLTITAIDTVGNISAPKNIVFLLDEDAPTAKIINFDANSTQTGSITVKGLVEDIGNAGVDSSATAWKIVKRNDPAPEDKANWPEKDDLKGWKKVDKPTVGNWEITTLDLSRYITADGTTANQYKSEYAVQRGADILFDLPLYVFVKDSVGNAKVVKLNILVDPAGDIPVVKILYPQKNGDTVGGLIKIYGTAAVNDPAKGSVENVYIQITKNKDGNGNPTFDSPCTFGGKEWCTPGTTHGVQLTADEFKAGSGFWALDINRDKEFEETGNNTQQTIWFRLRGKNTTNKFGAWTEPFKLIVDKNAPKITAAKVATEGNIGSAPTGDFDNRFYVPNMWIKGDDLYLCADLSHTAGIKSVEVSGTLNCLQSNRQDLKDDKIVGVNIAGTGKQWFFENPSGSKNYQMRIPLKTTDNPGSNNEFSITVKITSNVSTSGQESTAESTWTLKYDNAKPAAVFGAKIKASPMKISGASFTDASLIDSKIDTNSMYVFAAGEARKITGFNETSGTVTLESALSGESSGYIIYSPADYTWNTGAGLCTVEGIADDVGAGVKTVKAALKINGTTTPDKVLNFPQANGLTSDIGTFVIWKGEVNTTGIPDGQGMLTFTVTDEAGNESTSSVTLKLKNNPLQINKLGIGTDLNYSETIGDGEGEFAWQNISYLPDTDSGVDRVTKDWSGTVTANLSFKNPNSQIKVESSGGNGTIKYTLKCGTETIHSLADLPTGGIIPLTANDFAKIGQGNKTLVLTLWDAAAGLTQGTDTWKAEATITVKVDTTDQFAPTAGIKPLHWTSKTDNSLYKNSELQGHIELKNGTSGNDKVSGKISIRGSAHDDKIITEIWAAITDFEFAAGIQVPAEAKNADRGIKIAEYSRKTKEWIYCFDQNNNKYVRFKDGTLQFFEASNAWKEYTWDNAENKWYLGPESAKTYYGQKDVSNTGWFFEVTKSTFSQDSGHDIAWQLDWDTARIKNIAGKNKTVKLFVKDSTNYSLEKAITVDVVPYITKVTTALSAMNQSKPSENDRTALGHYPVCSDETITVEGFNLTDAVYKIGGTNLGAGAAIPNGATIAVASAAASGELTATVNGVSSINNSNSNAAIYNQKPNGLNNNTLTDDVFIDIWQFNPKAVLPSNGTVEDAVMKINPKTGIIGFAFANGSNLFSMPSDSTSYTKWQKNWDDYGAIGLAYDPQGGAHGVASVRDTNYNEKQAGPFTYFSAKDVAPGGSSAGEGYAGTGGYRLESLGTTIDNMNKKRIQSPSLAISKEGRYLAYYDMLTDQIRFRHKSQLLTTSVYNEPTVTPVDHYSLIAGGRTGNTAGEFVSIAVKSGDTEADDVVVAVWYTGSSLMYAYKTNPANDTDADQTGSRDGYWSKPKKVFENLSSVGEYCQIAVDKNGGIHIAASDVGNTALVYAYMSDYKGVDLKTCTIDSYGIIGTHITLDVALSEKGKPIPYIGYFSNSAGKPKLAYLVEPNDPAEFEQTAAGAVSDKMTGKWEITLVPTQQRVREGRVNAGVWKAAGVITKSTKGTTTPQTGSTSDTGNVYGNETANPVLGYLIRQNWAVETAQKK
>NZ_CP042816.1|WP_002701359.1|782060_782609_+|isochorismatase-family-protein
MKNYKLKRENALILFVDIQDKLLDIMQEKEEVLKKAVVLAKMANIMQLETLFTEQYPKGLGHTNKGLFDSVKSTAIEKTSFSCMLEKNFTEALTKKNKKQIIISGIETHICVLLTVRDLIAFGYEVFVCEDAVSSRDLRNKHNALHQMNDLGAVITNVESVMFDLNSVAGTDEFKAVQKLIV
>NZ_CP042816.1|WP_024753114.1|782786_783530_-|copper-homeostasis-protein-CutC
MKNITIEICAGSLDDALLAEKAGAQRIELNSSLFLGGLTPSLGTLRLVKQKTKLKVLTMVRPRAAGFFYTEAEFETMKEDARIFIENGADGIVFGFLNADGTLDAARCEALCKIANSRETVFHRAIDVVPDPLKTLDALIELGITRVLTSGQEPTAPEGAELIAEMVRHARGKIEILPGGGITKKNASRLVQETGVSQIHFAALCSKPEPSVQHNPKIYYGGALYPNEDRFEIADLDEMRRIIEKVN
>NZ_CP042816.1|WP_024753115.1|783592_785071_-|M81-family-metallopeptidase
MRILVGGISHESNSFNPIITGINDFVVFRGEEVLTKGLLPYYSSTGIIDTLRGWGWEVVPALVARAVPNGLVQHELYQSLKAEFLHYLDEALTEAPIDGICLGLHGSLKVENLGAAEGDLLAAIRERLPDVPLTVALDMHATVTDEMIRYCDGIVGYKTAPHIDCYETGVHAAKLLRSAFDSGKKLCIGRVSIPMLIAGEKSESAEEPMKSLLAACVEAEKRDGILAASILLGFPWADCEDNGVSIVTVSDGCQKLADETAKELARKFWSERHNFRFRAEHYDSVSSILKAIEAVTINKEQPVFISDSGDNPTAGATGDATELFEAMLSFSDKIQSLPTPLLYSGFFDAPAVDACMRAGEGKTLDITIGGNWDKINGTQIPCTVKVLRLVKDYGTYRSNLALVEYKNMHIVLTGKHIGFGDENLLPALGVNPLDYCIVTVKLGYLEACFQDIAARAIMATSKGCSNELLETLDYPKTRKPIYPLNKNMEWSC
>NZ_CP042816.1|WP_148879612.1|785603_787379_+|ATP-binding-cassette-domain-containing-protein
MFHKRLMTVVKDSKKWIRLIVFYNWIALLCNIAISAIIVKGIEIVFNQSFPSKRQLVFFAGILIFVFFIRIVSARQSSYCSYRASKNVKQTLRKLLYDKITSLKLNYGEVVSSAEVTQIGSEGIEQLDMYFGQYLPQFFYSMIAPLTLFIILAPINFIAALILFLCVPLIPLSIIAVQKVAKRLLKKYFTIYTGLGDNFLDNLQGLIILKAYNDDEHKQQELRAEAEEFRKITMKVLTMQLNSVSLMDIFAYGGAALGIIVSILQMQARNLSMSGALLFILLSAEFFLPLRLLGSFFHVAMNGITAADRLFAILDVQEEKTEYDSGFITKFEHAMDNAKGCGIGIESLSFSYTEGTELFTNFSLSFPGAGLYAIVGESGSGKSSIAALLTGLQKNYTGKITIHDFDIKKIPDSIRCKYLHMVSSDSYLFKGTVRENLLIAKSDASDEELFSVLQQVRLDGFIHQNGGLDFQIETQGKNLSGGQIQRLALARALLFDAPLYIFDEASSNIDIESEEIIIANIRELSKQKTIIMISHRLANTVHADSIAVLKNGTLCELGTHSELLHVNGVYAKLFTQQQNLEKIREEKNALY
>NZ_CP042816.1|WP_024753117.1|787365_789030_+|ABC-transporter-ATP-binding-protein
MRYTKFQLIIKLFDIVKPLLPIMVITIIAGVAGFMAATFIPVLGAAGVLQVLQVSGAENLFTIKTIIVLLVILSLSRGVLRYLEQLSGHYIAFKLLALIRDKVFESLRKLAFVKLQRKDSGQLLSIITADIELLEVFYAHTIAPVSIAVICSSIFIFLFVRISWILASIAAIAYLVLGLFLPLVFSKKEKTLGTEYRAQVGDLNAYFLESLRGMKEIFFFNLVAKREATLEEKNNKVDSLFKRIKNFSGLNRAVSEACILIFDITMVAAASILFASGSISFIGMVISAVLFMSSFGPVIAVTNLSTNLIQTFASAERVISLLEEKPEITDVTDKHDIRFETLALNSVSFAYDTEEVLKNISFTAKKNTIIGIHGKSGSGKSTLLKLIMRFYDPQSGNIKINNTDLKEINTASLREAISYVTQHTYVFNKSVYENLIIANRAASKDTVIAAAKKANLHDFVLTLPQGYDTKIAELGLSISGGERQRIGVARAFLHQAPLILLDEPTSNLDSLNEAVILQSLLREKENKTILLVSHRKSTMGIADTVINIDSGRIS
>NZ_CP042816.1|WP_148878568.1|789122_789389_-|hypothetical-protein
MKARMSTLRPCCCAGLFWLMLRRDSDPLTPAAEECKFQNGHGRPWFQTDGLVFDMDVKIRSFGFTQKRWVSCLIKTEDKIRELSLSLW
>NZ_CP042816.1|WP_044634615.1|789749_790511_-|LPS-export-ABC-transporter-ATP-binding-protein
MTLAEEQKKVFTGSVLRVDSLNKYFRKKHAVNSVSFSMQQGEVVGLLGPNGAGKTTSFYMIVGFYQPNSGNIYLDDLCITGLPMYKRARVGISYLPQEPSVFRKLSVEQNIYAILETRPDLTKAQRKERLEFLLEEFGITANRKQPAYTLSGGERRRTEIARALAIEPKFLLLDEPFAGIDPIAVHDIKKIIRLLSTQKIGVLITDHNVRDTLEITDRAYIINHGQIVEQGGKETILNSEVARAVYLGSEFRM
>NZ_CP042816.1|WP_024753120.1|790621_791410_-|hypothetical-protein
MKKIAAIHIFFSLSLVLFANSKISFSSDKLEGSAGKDKTTTILTGNASVKIDNLQIKADRIELSGKNYRFISATGTVSGKDEEKGLEFSSSALNFDRDTEVAEFLGSVSVKDTKEDVLVKGERISYNKKHETMLLQMNIELTQKDLSCKAMFGMYYRKKSLLELTGRPEVTKEKDIFKAERITVNLDTKDITLKGKVSGSIIEKEKKKADTSSKTENTSAEKETSPEKTPTIKERDNTSTGKPNLDSANKAEITINDSKGKN
>NZ_CP042816.1|WP_148879613.1|791406_792009_-|LPS-export-ABC-transporter-periplasmic-protein-LptC
MKKFFLAYKFFLLPLPAVFFLSCSFNYTDKAQEDGAKYPDMVFSEIQIRRHENTTLRTEIFANTIEFYAGEQVWAGENVRFTQYDEKDNSEALRGTAGFLLASEKENEFRLGNKVAIEFLKDKLSAQGTAFVWKKNEHTLLAPENGIVSIKKENEIAIEGKGFVADSQAKTFAFQETVSGTIYQKEQKAEEASDTEKEQK

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Crispr_ID: NZ_CP042816_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_4

889548-889695

Orphan

Consensus_repeat	Method
GAACCACGGGCATCCGTGCCCGTTACCATCGGAATGCTGAAGCCGTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_4

>merge|NZ_CP042816|4|889548-889695|CRISPRCasFinder
GAACCACGGGCATCCGTGCCCGTTACCATCGGAATGCTGAAGCCGTTATTGCATAAGATTGAGGAGATTGATAAAACAGTTTTTGAGCCGCTGCTGCCTTGAACCACGGGCATCCGTGCCCGTTACCGTCGGAATGCTGAAGCCGTTA

>NZ_CP042816|4|4|889548-889695|CRISPRCasFinder
GAACCACGGGCATCCGTGCCCGTTACCATCGGAATGCTGAAGCCGTTA	TTGCATAAGATTGAGGAGATTGATAAAACAGTTTTTGAGCCGCTGCTGCCTT
GAACCACGGGCATCCGTGCCCGTTACCGTCGGAATGCTGAAGCCGTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_024753167.1\|881542_882952_+\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
NZ_CP042816.1\|WP_024753177.1\|898701_899670_+\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP042816.1\|WP_081718799.1\|893424_895974_+\|selenium-dependent-xanthine-dehydrogenase	unknown	unknown	gnl\|CDD\|132354
NZ_CP042816.1\|WP_148879166.1\|900589_900925_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224916
NZ_CP042816.1\|WP_002699337.1\|897276_898248_+\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|239599
NZ_CP042816.1\|WP_002699314.1\|879999_881346_+\|glutamate-mutase	unknown	unknown	gnl\|CDD\|379405
NZ_CP042816.1\|WP_002699340.1\|899670_900111_+\|molybdenum-cofactor-biosynthesis-protein-MoaC	unknown	unknown	gnl\|CDD\|237733
NZ_CP042816.1\|WP_024753169.1\|886417_887620_+\|diaminopropionate-ammonia-lyase	unknown	unknown	gnl\|CDD\|236186
NZ_CP042816.1\|WP_024753173.1\|891962_893339_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274468
NZ_CP042816.1\|WP_024753176.1\|898244_898721_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP042816.1\|WP_148879627.1\|876403_877297_+\|glutamate-formimidoyltransferase	unknown	unknown	gnl\|CDD\|131079
NZ_CP042816.1\|WP_024753166.1\|877298_878975_+\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511
NZ_CP042816.1\|WP_024753171.1\|890073_891396_+\|putative-aminohydrolase-SsnA	unknown	unknown	gnl\|CDD\|235963
NZ_CP042816.1\|WP_148879626.1\|874753_876295_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP042816.1\|WP_024753175.1\|896301_897246_+\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NZ_CP042816.1\|WP_002699320.1\|883775_884969_+\|knotted-carbamoyltransferase-YgeW	unknown	unknown	gnl\|CDD\|274517
NZ_CP042816.1\|WP_024753178.1\|900089_900593_+\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl\|CDD\|238451
NZ_CP042816.1\|WP_002699321.1\|884987_886310_+\|YgeY-family-selenium-metabolism-linked-hydrolase	unknown	unknown	gnl\|CDD\|183836
NZ_CP042816.1\|WP_039915224.1\|883080_883746_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|377981
NZ_CP042816.1\|WP_148879167.1\|887641_889324_+\|selenate-reductase	unknown	unknown	gnl\|CDD\|236630

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_024753167.1\|881542_882952_+\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
NZ_CP042816.1\|WP_024753177.1\|898701_899670_+\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	1.46454e-91
NZ_CP042816.1\|WP_081718799.1\|893424_895974_+\|selenium-dependent-xanthine-dehydrogenase	gnl\|CDD\|132354	TIGR03311, Se_dep_XDH, selenium-dependent xanthine dehydrogenase. Members of this protein resemble conventional xanthine dehydrogenase enzymes, which depend on molybdenum cofactor - molybdopterin bound to molybdate with two sulfur atoms as ligands. But all members of this family occur in species that contain markers for the biosynthesis of enzymes with a selenium-containing form of molybdenum cofactor. The member of this family from Enterococcus faecalis has been shown to act as a xanthine dehydrogenenase, and its activity if dependent on SelD (selenophosphate synthase), selenium, and molybdenum. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_CP042816.1\|WP_148879166.1\|900589_900925_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|224916	COG2005, ModE, N-terminal domain of molybdenum-binding protein [General function prediction only].	1.44273e-20
NZ_CP042816.1\|WP_002699337.1\|897276_898248_+\|molybdopterin-binding-protein	gnl\|CDD\|239599	cd03522, MoeA_like, MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.	9.48134e-124
NZ_CP042816.1\|WP_002699314.1\|879999_881346_+\|glutamate-mutase	gnl\|CDD\|379405	pfam13941, MutL, MutL protein. This small family includes, GlmL/MutL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family.	3.31629e-159
NZ_CP042816.1\|WP_002699340.1\|899670_900111_+\|molybdenum-cofactor-biosynthesis-protein-MoaC	gnl\|CDD\|237733	PRK14499, PRK14499, cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein.	1.88551e-43
NZ_CP042816.1\|WP_024753169.1\|886417_887620_+\|diaminopropionate-ammonia-lyase	gnl\|CDD\|236186	PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional.	0
NZ_CP042816.1\|WP_024753173.1\|891962_893339_+\|hypothetical-protein	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	2.44944e-116
NZ_CP042816.1\|WP_024753176.1\|898244_898721_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	2.32528e-77
NZ_CP042816.1\|WP_148879627.1\|876403_877297_+\|glutamate-formimidoyltransferase	gnl\|CDD\|131079	TIGR02024, FtcD, glutamate formiminotransferase. This model represents the tetrahydrofolate (THF) dependent glutamate formiminotransferase involved in the histidine utilization pathway. This enzyme interconverts L-glutamate and N-formimino-L-glutamate. The enzyme is bifunctional as it also catalyzes the cyclodeaminase reaction on N-formimino-THF, converting it to 5,10-methenyl-THF and releasing ammonia - part of the process of regenerating THF. This model covers enzymes from metazoa as well as gram-positive bacteria and archaea. In humans, deficiency of this enzyme results in a disease phenotype. The crystal structure of the enzyme has been studied in the context of the catalytic mechanism. [Energy metabolism, Amino acids and amines].	7.71184e-154
NZ_CP042816.1\|WP_024753166.1\|877298_878975_+\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NZ_CP042816.1\|WP_024753171.1\|890073_891396_+\|putative-aminohydrolase-SsnA	gnl\|CDD\|235963	PRK07203, PRK07203, putative aminohydrolase SsnA.	0
NZ_CP042816.1\|WP_148879626.1\|874753_876295_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP042816.1\|WP_024753175.1\|896301_897246_+\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	3.30633e-48
NZ_CP042816.1\|WP_002699320.1\|883775_884969_+\|knotted-carbamoyltransferase-YgeW	gnl\|CDD\|274517	TIGR03316, aspartate/ornithine_carbamoyltransferase, knotted carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with selenium-dependent molybdenum hydroxylases.	0
NZ_CP042816.1\|WP_024753178.1\|900089_900593_+\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	2.54483e-69
NZ_CP042816.1\|WP_002699321.1\|884987_886310_+\|YgeY-family-selenium-metabolism-linked-hydrolase	gnl\|CDD\|183836	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase.	0
NZ_CP042816.1\|WP_039915224.1\|883080_883746_+\|PAS-domain-containing-protein	gnl\|CDD\|377981	pfam08348, PAS_6, YheO-like PAS domain. This family contains various hypothetical bacterial proteins that are similar to the E. coli protein YheO. Their function is unknown, but are likely to be involved in signalling based on the presence of this PAS domain.	4.11186e-33
NZ_CP042816.1\|WP_148879167.1\|887641_889324_+\|selenate-reductase	gnl\|CDD\|236630	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional.	0

>NZ_CP042816.1|WP_148879167.1|887641_889324_+|selenate-reductase
MSDTMYGVGFKNILKHIFTEYEKKQTIYNVKGIFKKNNDKVLKIFGSDLESPLGVAAGPHTQLAHNIAADYVGGARFIELKTVQYLYGEELGIQRPCIRADDEAYNIEWSSEFRADIARDEYVRAWFVCKVLAKELDLGSPEGFIFNMSVGYNLEGIKHPLIDEFIETLKDARNTKVYKQCKEDLIELLPMFKKVDREFIESISPNICNSLTLSTMHGTPPEEIEKIVKYILTEKKLHTYIKCNPTLLGYEYVRKVLDEMGYDYIQFGRHQFDIDLQFDDAVVMIKNLQNLAKNLNLEFGVKLTNTFQVAINNRELPGSDMYMSGKALYPLSIATAAKLSKAFDGKLPISFSGGADKNNIKELFDAGIFPVTVCTVLLKPAGLDNLKQLADKLEEVEYKKNKITDTEKIEALRKDSLKNKNYIKSEKERKKYDLHKSFEGIKDDSYECRVLCKNCIRVCPNRANEELVLDDKKIIVHIDSVCNECGNCQFYCIEPARPYKDRITIFNTLDDFHNSENPGFYKKQGEFYYRLNGDEGVGELPKELKNIYSKIAEDMPYYIE
>NZ_CP042816.1|WP_024753169.1|886417_887620_+|diaminopropionate-ammonia-lyase
MEKILLASMRKDPRDVDIRFINDTVAKRVINFHKSFPQYEKTPLVELAHLSNYLGIKNIFVKDESYRFGLNAFKVLGGSFAIGSYIADRLGMSVEDLPYERMISKEIKEKLGEITFATATDGNHGRGVAWTANQLKQKSKVFMPKGTARERLDNIRAENADADIYEYNYDECVRLADEYAKTHNGILVQDTSWEGYEDIPRYIMQGYMTMAYEAYNELKEKGSLPTHIFLQAGVGSLASAVTGFFANVMKDAIPTIVIVEPHKAACLYQTAKADDGKLHPVTGDMDSIMAGLNCGEPVTVGWPILKKYAHSFLSVDDCFAAHGMRLLGNPLKNDKKIISGESGAVTAGVVSKLMTDDSLKNIKEKIGLDSSSIVLCFSTEGDTDKDNYLKTVWDGKDSSL
>NZ_CP042816.1|WP_002699321.1|884987_886310_+|YgeY-family-selenium-metabolism-linked-hydrolase
MANMDFEKIKAKAAEYHEDMIKFLRDLVQLKGESCEEGEKAKRIQQEMDKVGFDKTWIDKQGNVLGEMGTGKTIIAFDGHIDTVGIGNRDNWKFDPYEGYEDEHTIGGRGTSDQLGGPVASVYAAKIMKDLGLLNDKFKVLVTGTVQEEDCDGNCWLYMIEQEGIKPEFVVSTEPTDGGIYRGQRGRMEIRVEVSGVSCHGSAPERGDNAIYKMAEILKEVEALNENPADDSVEIKGLVKMLDKKYNPEYEEANFLGRGTVTTSEIFFTSPSRCAVADSCAISLDRRMTAGETWESCIKEIEDLPACKKHNAKVTMYKYARPSWKGLSYEQECYFPTWVIPKDHKVTVALEKAYKALYGDKRISPPIKKEEEKRFSRPLVDKWTFSTNGVAIMGRHKIPTIGFGPGAEDQAHAPNEITFKQDLITCAAVYAALPTMYIEG
>NZ_CP042816.1|WP_002699320.1|883775_884969_+|knotted-carbamoyltransferase-YgeW
MDFKELIGSLDKLDFKGLYNENFFLTWDKTDDELKAVFAVADAIRKLRENNKSAKIFDSGLGISIFRDNSTRTRFSFASACNLLGLEVQDLDEKKSQIAHGETLLETANMVSFMADVIGIRDDMYIGKGHTYQKEFADSVKLGYEEGILEQKPTVISLQCDIDHPTQMMADTLHFAHYFNGFENLKGKKIALTWAYSPSYGKPLSVPQGGIGLWTRLGMDVVLAHPEGYNVMEDVVGVAKNNVKKYGGSFTISNSMEEAFKDADIVYPKSWAPFAAMEERTELYGRGDFDGIDKLEQRLLKQNATHKDWTVTEELMKLTKNGNALYGHPLPADITGVSCEAGEVDKKVFDKYRKELYTEASFKPYIIAAMIFLQKIQNPKAKLEELWNKDTARINDK
>NZ_CP042816.1|WP_039915224.1|883080_883746_+|PAS-domain-containing-protein
MERDEKERILEQYISIAQFISVVAGPNCEVVLRDYHKGYSKIIFMVNGRLSNRKVGDEITGYTLEKIMRSDYRKHDCVLNYIIINESNQRVFRASTYYIKQGGELIGLLCVNYDLTKYLEFRDFYTNEVLYGLEENLAGSKDYFDESMDSILEGIIRNVFVHWDRNIPVKNIEAEGNPIRELYKLNVFKYKGSVNKVAELLDISAQTIYRYLGEIEKSIQE
>NZ_CP042816.1|WP_024753167.1|881542_882952_+|dihydropyrimidinase
MNILIKNGTIVTDSEVKKADVFIEGEVIAGIGDFAHKEKTCEAVYDAAGLYVMPGLIDPHTHMELKQSETYTSVDDFYTGTIAAACGGTTMIIDHIAFGPQGCNLHYSLNNYKELGKKSVVDYSFHGVIQHVDDSILEELYDIVKNEGIASFKAYSTYGYAMNEVDFYKIIEVMKKAGGLLTIHCENDKITNYLRNKFVSENKISPIYHAYSRPNEAEAESVDELLNLAKLIGDGPIYIVHTSAHESVERIRLGRALGQKNLYAETCTQYLTLTEEKYFEDGDEEGMKYLMAPPLRKKADRESLWNALEDKTLQVVATDHCPFNLKRDKLPHIKNFTASPGGAPGVEERPMVVFSEGVMKGRMSLNRFVEVMSTNAAKIFGMYPKKGALKVGSDADITIIDPNRKKTISVKTQHSVCDYNTYEGFESKCSIAMVFLRGKLVAQYGKFLGKKGDGAFVFRKREQAYAAVR
>NZ_CP042816.1|WP_002699314.1|879999_881346_+|glutamate-mutase
MKYLLVDLGSTYTKLHIVDTEKNAVTAAASAYTTVETDVAVGFNVAFQKLKDAGAADYDRILGCSSASGGLKIVVIGFSKSLTTEAARLASLSAGGRILKIYSYELSDEDVAEIEKSGADIIVLSGGTENGNKQNIIVNAEKLSAANLQNATLLVAGNTAANPKIKAIFEQSPIVPVFTENVMPATNVVNYKPLRETIGNIFINTIAFAKGIHELSKNFEILLPTPVAVQKAVAAVKKVKGAEVMAVDIGGATTDVHSVAKSFHGEENILSPLFEDPYEKRTVEGDMGMRYSACALYESVGEEAFRKFGIENAKEKTDFRFRNTAYIPETFDEYEFDQIMAHIAAKEALKRHVGTVKKVPTSTRTMFQQNGKDLRFVKYFIGTGGVLIHSKAPERILCAIHQMEENYLAPKNCTFLLDKSYLLASAGLIATVDEQAACKLLEKYLEKV
>NZ_CP042816.1|WP_024753166.1|877298_878975_+|formate--tetrahydrofolate-ligase
MEFKTDIQIAEEAKLEPIADVAAKIGISSDELENYGKYKAKISWEALDRLESKKDGKLILVTAISPTPAGEGKSTVSIGLTQGFNKIGKKSAVALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDIHAITAANNLISAMIDNHIHQGNALNIDTREVVWKRVLDMNDRSLRNIVISLGAKADGVPREDHFMITVASEIMAVLCLSKTLTDLKERVGKIIVAYAKDGSAVKVSDLKAEGAVAMLLKDALKPNIVQTLENTPAFIHGGPFANIAHGCNSILATKLALKTSDYAITEAGFGADLGAEKFMDIKCRMSGLSPDAIVIVATIKALKMHGGVPKTELKAENIAALEKGFANLKRHVENVHKFGVPAIVAINKFANDSDAEIAKLKELCKQLNVRISLCECWEKGGAGAEDLAQQLVELIDEGKKDFKYLYDVNDSIETKVNTIVKEIYRGKGAVFTKAAKGQVKKLEALGLDKMPICVAKTQFSFTDDASVMGAPEDFTIEITDVRVSNGAGFIVVQTSNIMVMPGLPKIPAAENMDIDNNGRVSGLF
>NZ_CP042816.1|WP_148879627.1|876403_877297_+|glutamate-formimidoyltransferase
MKRVMCIPNYSEGRDLEKIEKIVECFRAKENVRLIDYQPDSDHNRVVVEVIGEPSAVVKAVIESVKVAAQVIDMSTHQGAHPRMGAVDVIPFIPVTETTTAECVEYAKEVGKAIGDMGIPVYLYEDAATKPERTNLASIRKGQYEGFFDKIKDSEWKPDFGPAEMNAKSGVTAVGARFHLVAFNVNLNTPNLEVADKIAKKVRFIGGGLRFVKAIGLELKEKNQVQVSMNLVNFEKTAIYQALEMVKSEARRYGVSVANTELIGLLPLQALIDSAAYYMQIEDLKAEQVLETLLIGE
>NZ_CP042816.1|WP_148879626.1|874753_876295_+|histidine-ammonia-lyase
MKVILSGNNLDLEQVIAVARNHAEVELDKKSIEAVEKSRKYVEEIVEEERVVYGINTGFGSLSCVSISKEDNAQLQENLIRTHASGFGDPLGEDEVRAVMLIRINSLLKGVSGIRLSTVETLLNMLNKNLVPFIPEKGSLGASGDLAPLAHMVLPMLGLGKAYYNGELLQGGEAMKKAGIPVIKLAAKEGLALINGTTVLTAIGALALYDAINLAKIADIAGAMSLESARGIIDAFYEELHVIRPHKGSLTTAKNLRELLADSGYITHTAEIRVQDSYTFRCMPQVHGASKDTLNYVKEKVEIEINSATDNPIITQAGQVISGGNFHGELMAQPFDFLAIAASEIGNISERRIERLVNTQLSKMPSFLVKHLGLNSGFMITQYAAAALASENKTLSHPASVDSIPSCENQEDFVSMGQWAARKAREVVKNATRIIATELMIAAQALDFRKEMEDNKYQFGKGTGVAYKVMREFVNFIEKDDNIEIYDELEKATDAIRTGKLLNEVSKAVKLEI
>NZ_CP042816.1|WP_024753171.1|890073_891396_+|putative-aminohydrolase-SsnA
MIITNGKVITNDKNSTFYDNGAVYIKDNIIVDVGNSDEIKKHYKTETILDAKGGIILPGFICTHSHIYSAYARGISVTKPTDNFFNVLENLWWSLDSKLKEKDVELNALTTYIDSIMNGVTTVIDHHSGPQSLDGSLFIIAEAAKKLGIRTSLCYEVTDRYGDDVRDRAIKENIAFIKAAQKNESDMIKGLFGLHASFTVSDETLYKVREAMEGVYDGYHIHVAEGLEDELLCLKKYKKRIVNRLFDFDILGERTIAAHCVHINAGEMDILKKTNTNVVHNPESNMNNAVGTTNVLKLLEKGIVVGLGTDAYTNDMYESMKVAKILMSHEASDPTVGFAETKQMQFTNNPIILSKYFNKNLGVIEKGAYADIAVAEYNPPTPMHKDNWFGHLVFGLSGKQTIHTVINGKIVMKDREVLGIDVDKIMSESRIRAAEIWKEM
>NZ_CP042816.1|WP_024753173.1|891962_893339_+|hypothetical-protein
MEKDTKGLLFQLEGKPSLNETMPMAFQHVVAMIVGCITPALLVGGVAGANLSQDNLVLLIQMSLVIAGLSTLVQLFPIGKKIGSSLPVILGVSFAYVPTMQSVASTYSKNPAFGSEKAIGVIVGAMIVGGACALLFGMFVKYLKPLFPPLVTGTVVFTIGLSLYPIAIRYIGGGNAMAKDFANPKNLFVGFLTLAIVTALNHFGKGFIKLSSILISIIIGYLVSIPLGLVNFSKIASSSIIINQNPILHFAPQFETSVIISFVILFIVNSVQAIGDFTATTVGGLDREPTEKELSGGIIAYGITNMLGSLIGGLPTATFSQNVGIVGTTKVVNRRVFAQAAIIILIAGLIPKFGALLTTIPTPVLGGATIPVFSSITMTGIKLIAKEPLSFRNTSIIGLSVAIGMGVTAVPQLFNVEVYGPTALMVKTAIGSSPVVLATLCAIILNVIIPKKAEDIAK
>NZ_CP042816.1|WP_081718799.1|893424_895974_+|selenium-dependent-xanthine-dehydrogenase
MYELNINGLNYKTDKDKKLIRFLRDDLRLTSVKDGCSEGACGTCTVLIDGKPTKACIPTVAKSVGKTIITVEGLSDWEKEVYAHSFSIAGAVQCGFCIPGMVIAAKALNDTNDNPTEEEIRHAIRNNICRCTGYVKIIEAIQLSSDILHNRKSIEKEDEKTGVGTNTIKIDSYDKVLGTGMYTDDLYLENMAYGRLLKSKYPRAKVLSINTEKAEALEGVIGVLTAKDVPHNKIGHIIQDWDVFIAEGDFTRYVGDDLALVVAEDDETALKGLSLIEVEYEVHTPVSTIKQALSEDAPKLHEKGNMCAEKHVARGDAAKALENSKYIVTDKFTTPFTEHAFLEPECSVAFPYNNGVKVYSSDQSVYDTRKEIAIMFGWEPERIVVENMLVGGGFGGKEDMSVQPHAALAADKFKRPVKVKLTRQESINTHPKRHPMEAEFTIGCDENGILQGMKADIYFDTGAYASLCGPVLERACTHAVGPYNYQNTEINGYGLYTNNPPAGAFRGFGVCQSCFAIESLLNILAEKVGISPWEIRYRNAIRPGQVLPNGQITDPSTSLVETLLAVKEVYEKNKDRAGIACAMKNAGVGVGLPDKGRCKLVVKDKTVEIYSGATDIGQGIATVLVQIACETLGLKKHEVKFMVVNSKDSPDSGTTSGSRHTLITGEACRGAAALLLEDLKNSSLEELEGKEYFYEYFDPTDPLGSPKENPKSHLAYGYATQVVILDDGGKVADVYAAHGIGRAINKKALEGQIEGGVVMGLGYALTEDFPLENSVPKVKYGTLGLLKATNSPKVHSIIVEKEGIKEAYGAIGVGEITTIPTAPAAAGAYYAFDKKFRTNLPLKETAYKK
>NZ_CP042816.1|WP_024753175.1|896301_897246_+|XdhC-family-protein
MIETFVFARELFLKTTPFVIATIIDKKGSSPREVGASMIVTQNGLAQGTIGGGAIENEAIKKAKSLIEENSSSIEEYILTDNTAASIGMVCGGSNKIFLKYIDTKNKIYLEIFNRLIENYKEKETKLIFDLERLNIFANIDGEIFPNETISGNSFQLLVKDSIKVFVFGGGHVSKAFVKILDFLKLNSVVVEERAEFLEEKDFPNSKRILIGYEDIDTVNITSDDYVCIITRGHTSDSIVLEKVLEKNPQYIGVIGSKRKVALMFKNISDKYSKTMLDKIHSPIGLDIGAQTPEEIAISIAAEIIGEYRAAPLR
>NZ_CP042816.1|WP_002699337.1|897276_898248_+|molybdopterin-binding-protein
MKVIQTKDAVGKILFHDLTQIIPGKSKSARFKRGHVIKEEDIEVLLSMGKEHVYVYELDDTHYHEEDAARILAGICAGENIRLSDVSEGRINLISEIDGLLKVNVKLLHTINSMPDVMIATKYNDSVIKEGDVLAGTRAIPLIIKKEKIKNCLDSAQGEHILKVLPYKKQRVGIITTGSEVFSGKIKDGFKEVLTEKLLPFDFEIIHHSYSKDDIDSILTEIRAADKKNCDLILCTGGMSVDPDDLTPGAIKAYADHVVSYGTPVLPGAMFLVAHKNRTAVLGLPGSIIFNKKTVFDLILPKIAAGEIITKEYLISLGHGGLL
>NZ_CP042816.1|WP_024753176.1|898244_898721_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MNTLTHFDERGNARMVDISNKSVTKRKAVACGKITMNNNVFEKIKNKEIEKGDVLTVAQVAGIMAAKKTSDLIPMTHPINTEKLALSFELDETEHSVIAVCEAEIYAKTGIEIEVITGVSIALITIYDMVKALDRSMVISDIKLVHKSGGKSGEYNRT
>NZ_CP042816.1|WP_024753177.1|898701_899670_+|GTP-3',8-cyclase-MoaA
MSIIELKDSFNRKIDYIRVSLTKNCNLRCKYCMPECGVYKESLLKIKDYEKVLLALSEVGIKKIKITGGEPLVRKDTMDLVKSLKESKKFTKITLTTNGLLIDKYIDEIINYMDGVNISIDSLNDSMYKYITGGELQNLKENIRLLLKRGYKNIKLNTVLIRGFNDKEILNLITFAEDNNLILRFIELMPMGNGKAYNKFSREEIDCVVSKVYKNKKRYNGKLGNGPAEYFTYDNLKIKIGFIDALGHSFCKNCNRIRLDSDGKIVFCLCYDTGFSTLDYIDGSITKDEFLKRVTQEILLKPMENIFNKKSESSYSMNELGG
>NZ_CP042816.1|WP_002699340.1|899670_900111_+|molybdenum-cofactor-biosynthesis-protein-MoaC
MGTLISINISPKRQTVKKEVTEANLIENFGIENDAHGGNWHRQVSLLSYESFLQFKDTIKIPMEHGIFGENLLISGIDFSKIKIGDRIIISNAELEVTQIGKDCHKGCEIKDIVGRCIMPEEGVFSKVIQGGAIKKGDAVCLKSIL
>NZ_CP042816.1|WP_024753178.1|900089_900593_+|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein
MFKVHIITVSDSSYYENKKDLTGPALRDFLTEHSFEVCGYDIVPDEINPISNLLIEISDSQKVNLVITNGGTGFNKRDVTPEATLKIADKIVPGFGEEMRRRSLEITPFGILSRAVSVIRNHTLILNVPGSPKAAVENLGFIITAIPHALKILTNEKNDCAKVDDSR
>NZ_CP042816.1|WP_148879166.1|900589_900925_+|LysR-family-transcriptional-regulator
MKNKFNHYIKITLVNENKFFGPGVYDLLTLIKKEGAIKTAAQKMGLSYSKALKMIGNMEKELGSKIVDRKSGGITGGESTLTEYAEQFLENYKKLEEEVKSYSEKIFNKYF

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Crispr_ID: NZ_CP042816_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_5

1402563-1402656

Orphan

Consensus_repeat	Method
TCCGTGCCCGTTCTGAGTTTTGCCGTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_5

>merge|NZ_CP042816|5|1402563-1402656|CRISPRCasFinder
TCCGTGCCCGTTCTGAGTTTTGCCGTCCATGGCAAAAACTAAACCGTCTGCTTGGAACCACCGCCATCCGTGCCCGTTCTGAGTTTTTGCCGTC

>NZ_CP042816|5|5|1402563-1402656|CRISPRCasFinder
TCCGTGCCCGTTCTGAGTTTTGCCGTCC	ATGGCAAAAACTAAACCGTCTGCTTGGAACCACCGCCA
TCCGTGCCCGTTCTGAGTTTTTGCCGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_002696581.1\|1395833_1396649_-\|flagellar-basal-body-rod-protein-FlgF	unknown	unknown	gnl\|CDD\|227125
NZ_CP042816.1\|WP_148879698.1\|1403134_1404388_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256
NZ_CP042816.1\|WP_002696573.1\|1413257_1413698_-\|flagellar-export-chaperone-FliS	unknown	unknown	gnl\|CDD\|376819
NZ_CP042816.1\|WP_148879700.1\|1406565_1407396_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP042816.1\|WP_024753482.1\|1400917_1402351_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|181973
NZ_CP042816.1\|WP_024753474.1\|1390140_1391376_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350610
NZ_CP042816.1\|WP_148879696.1\|1397216_1397984_-\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|225099
NZ_CP042816.1\|WP_081718837.1\|1407358_1407850_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP042816.1\|WP_148878986.1\|1412775_1413255_-\|flagellar-protein-FlgN	unknown	unknown	gnl\|CDD\|377465
NZ_CP042816.1\|WP_024753488.1\|1410464_1411589_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879699.1\|1404518_1406207_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989
NZ_CP042816.1\|WP_024753475.1\|1391646_1392933_+\|arsenic-transporter	unknown	unknown	gnl\|CDD\|238536
NZ_CP042816.1\|WP_148879701.1\|1408620_1409424_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223222
NZ_CP042816.1\|WP_024753487.1\|1411585_1412713_-\|(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|377382
NZ_CP042816.1\|WP_148879423.1\|1394731_1395382_+\|glucosaminidase	unknown	unknown	gnl\|CDD\|376625
NZ_CP042816.1\|WP_002696567.1\|1409451_1410153_-\|RNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211346
NZ_CP042816.1\|WP_024753481.1\|1400115_1400925_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP042816.1\|WP_044634854.1\|1398232_1400119_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_CP042816.1\|WP_044634856.1\|1392995_1394180_-\|tRNA-4-thiouridine(8)-synthase-ThiI	unknown	unknown	gnl\|CDD\|234960
NZ_CP042816.1\|WP_002696585.1\|1396799_1397063_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_002696581.1\|1395833_1396649_-\|flagellar-basal-body-rod-protein-FlgF	gnl\|CDD\|227125	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion].	5.27645e-101
NZ_CP042816.1\|WP_148879698.1\|1403134_1404388_+\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	2.77125e-09
NZ_CP042816.1\|WP_002696573.1\|1413257_1413698_-\|flagellar-export-chaperone-FliS	gnl\|CDD\|376819	pfam02561, FliS, Flagellar protein FliS. FliS is coded for by the FliD operon and is transcribed in conjunction with FliD and FliT, however this protein has no known function.	2.33706e-37
NZ_CP042816.1\|WP_148879700.1\|1406565_1407396_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.43164e-31
NZ_CP042816.1\|WP_024753482.1\|1400917_1402351_+\|6-phospho-beta-glucosidase	gnl\|CDD\|181973	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed.	0
NZ_CP042816.1\|WP_024753474.1\|1390140_1391376_+\|hypothetical-protein	gnl\|CDD\|350610	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins. This group contains erythromycin esterase, which shares conserved active site residues of the Tiki/TraB family. Erythromycin esterases (EreA and EreB) disrupt erythromycin via the hydrolysis of the macrolactone ring. A critical catalytic histidine acts as a general base in the activation of a water molecule. Macrolides act by inhibiting bacterial protein synthesis by binding at the exit tunnel of ribosomal subunit 50s, blocking the translation of the polypeptide. Erythromycin esterase, typically found in integrons and transposons, confers antibiotic resistance through the disruption of the drug ring structure. EreB substrate profile is substantially broader than that for EreA, being able to also metabolize semisynthetic derivatives such as azalide azithromycin.	4.16757e-08
NZ_CP042816.1\|WP_148879696.1\|1397216_1397984_-\|UTRA-domain-containing-protein	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.87595e-51
NZ_CP042816.1\|WP_081718837.1\|1407358_1407850_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.57278e-61
NZ_CP042816.1\|WP_148878986.1\|1412775_1413255_-\|flagellar-protein-FlgN	gnl\|CDD\|377465	pfam05130, FlgN, FlgN protein. This family includes the FlgN protein and export chaperone involved in flagellar synthesis.	0.0052562
NZ_CP042816.1\|WP_148879699.1\|1404518_1406207_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	2.53698e-98
NZ_CP042816.1\|WP_024753475.1\|1391646_1392933_+\|arsenic-transporter	gnl\|CDD\|238536	cd01116, P_permease, Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.	1.01628e-49
NZ_CP042816.1\|WP_024753487.1\|1411585_1412713_-\|(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|377382	pfam04551, GcpE, GcpE protein. In a variety of organisms, including plants and several eubacteria, isoprenoids are synthesized by the mevalonate-independent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway. Although different enzymes of this pathway have been described, the terminal biosynthetic steps of the MEP pathway have not been fully elucidated. GcpE gene of Escherichia coli is involved in this pathway.	9.8249e-160
NZ_CP042816.1\|WP_148879423.1\|1394731_1395382_+\|glucosaminidase	gnl\|CDD\|376625	pfam01832, Glucosaminidase, Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.	3.10706e-12
NZ_CP042816.1\|WP_002696567.1\|1409451_1410153_-\|RNA-pseudouridine-synthase	gnl\|CDD\|211346	cd02869, PseudoU_synth_RluA_like, Pseudouridine synthase, RluA family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.	2.09814e-41
NZ_CP042816.1\|WP_024753481.1\|1400115_1400925_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.1556e-48
NZ_CP042816.1\|WP_044634854.1\|1398232_1400119_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP042816.1\|WP_044634856.1\|1392995_1394180_-\|tRNA-4-thiouridine(8)-synthase-ThiI	gnl\|CDD\|234960	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional.	1.89066e-180
NZ_CP042816.1\|WP_148879701.1\|1408620_1409424_-\|SAM-dependent-methyltransferase	gnl\|CDD\|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	1.25251e-31

>NZ_CP042816.1|WP_024753482.1|1400917_1402351_+|6-phospho-beta-glucosidase
MNKDFLWGGAVAAHQLEGAWNEGNKGPSVVDVMTAGGQGKPRIITDEIEDGVFYPNHEAIDFYHRYKDDIKLFAEMGLKCFRTSIAWSRIYPKGIEEEPNEEGLQFYDDLFDELRKYNIEPVITITHFEMPLYLAKEYGGFRDRKVIDYFVKFAETVFKRYKNKVTYWMTFNEINNMMDYSNPIFLWTNVGVRVKDGENPKEIMYKSAHHVLLASALAVAKGKEINKNFKIGAMLSFVPIYPLTANPADIMLAEELIRKRYFFGDVQIRGCYPNYALKEFERENITIGIMPGDEEILQNGKVDYLGFSYYMSNTVSAEAKAPDADTVNIHGQLPFQVKNPYIKESDWGWAIDPIGLRYALNVLYDRYQIPLFIVENGFGAVDTLTEDGQILDDDRIAYLEAHIKEMKKAVEYDGVNLIGYTPWGIIDLVSFTTGEMKKRYGMIYVDRDNEGKGTMERKLKKSFHWYKQIIATNAEAL
>NZ_CP042816.1|WP_024753481.1|1400115_1400925_+|Cof-type-HAD-IIB-family-hydrolase
MIKIIFTDMDGTFLDSTGTYNKAYFKEVYRKMKEQNIIFVPCSGKQCERIEELFDDCGEELHIIGDSAARIKYRGKYIYEALLDNNTAKEIIKDFSAQYDVAIVACTSEGAYVKDTISEEDFKVIRHSYAIVKKIKDYAELTDNFIKVSIYDKKKRCFTILKDLKKYADRAYIVASEDAWIDITHKKVHKGAAIKWLIEHLHLNRAEAMGFGDGPNDIELINEVEYSFSVSNAVDELKEKSFFITKSNDEDGVLKTIDMILKLQEVIHE
>NZ_CP042816.1|WP_044634854.1|1398232_1400119_+|PTS-transporter-subunit-EIIC
MEQYKKLAEQILLKVGGKENVSKVNHCATRLRFFLKDESKASKIDVENLDGIVTVVLSAGQFQIVIGQHVAKVYNEIMELMGENPVADQNEGKKSVLNKIISTMSAVFAPFIYILAASGILQGVLILINLAYPAFADTGTYEILSMTSWAPFVFLPIFIAVTASKHFKANTYIAIAVCAALVSPTLSSMVARIQAGESITLFFMNLSPTVYTATVLPALFLVWWLSYLEKFLDRIFHAVVRGLFTPFFSIVITVPLTLLIIGPITATGANMVANGYNFLVAAARPVAAIVIGGFWQVFVLFGVHWGITPVVLANFDLYGRDSFQAYQTIAVIAQVGAALGVALKTRDKKLKGVGISAFVTGLFGITEPAIYGTNLRFKKPFIVACVSGAIGALVASFFSPYYFIYAGLPGPLTLVNAFNKEFPLSLIGELIGAAIAFSLPIAVVFLSGYGKDSTTDADNKDFINKDIQNKINSKIEKLAKEEKIVSIAKPIKGKTIKITEVNDEAFSSETMGKGAAIVPEEGKVYAPFNGEVVFLADTLHAISMLLDNGVDVLIHFGLDTVTLNGKGFKAFVKEGDKIKQGDLLLEVDLDYIRSQNLDITTPILINNSDDYKEVEITEDIHRFLVLKK
>NZ_CP042816.1|WP_148879696.1|1397216_1397984_-|UTRA-domain-containing-protein
MEKLTEFLYDVTKYITRGCFVLKYEFIANDIRQFILDNNLEQSSQLPKIDELVKKYNASKNTVIKALEILEQQGIIYQVQGSGIFVRRKHRDGYINLRTNQGFYNTLKKNTIESDILDFKEIPADERAAKYLKCPIGETLFLAKRLRYKSGEPFCIETSLYKKSVVGYLNEDILKRSIFQYLQEGLKLQFGFSDKYMTVSKLSKEEAKLLKIKENDPALIIEEVYYLSSGEAFDLSKIIYNHKNTKFFIQGTGRD
>NZ_CP042816.1|WP_002696585.1|1396799_1397063_-|hypothetical-protein
MSKFWGKHTVEPAPAAYINAVLPAILPKFENHLLPMVSLVTVAKFKTMFCLILQRKQAKLVGEVTVNFQNFAIVPCCSLSLVKKPRL
>NZ_CP042816.1|WP_002696581.1|1395833_1396649_-|flagellar-basal-body-rod-protein-FlgF
MIRGWYTAASGMNAQQQQLDVISNNLANVDTTSYKRDVTINKNFPELLLRRTNDDGVIKNPFGSSDAAPIIGKLGLGVEVNEVFTEFEQGSLKQTHSPSDIALEGKGFFAVQTPQREEYTRNGNFLVGVEGYLMTKEGYPVLGENGRIFLQDMEYKINQNGEIYARPITEPDTDAVFLDRLKIVTFENDRYLQKKGSSFYLDTPVSGPAIAAEGPDRPVTVQGFIEASNVNVVNEMVRMIEVNRAYEANQKTIQSEDTMMAKLWNEVVRVK
>NZ_CP042816.1|WP_148879423.1|1394731_1395382_+|glucosaminidase
MRRGCFYFSDASKIFHKKTDISRMNKKIIFSVYAVFLLCIFFCFSCKSVPPAVPQYIMGEGKLREKHFIAFFKSQNIPFDAQDLQALAEFYISESRIEGINADVAFAQMCLETGFLQFGGLVTREMNNFCGLGSIGADQPGEVFDSVQLGVRAHIQHLKAYASPAPLVMEVIDPRYKYVNPKGKAPTIYGLTKTWAQDPDYGKKLENLLHRMYKHL
>NZ_CP042816.1|WP_044634856.1|1392995_1394180_-|tRNA-4-thiouridine(8)-synthase-ThiI
MNENLLYLAKIGEINLKKGNLKNFERRLAQNLSLYLENTGASVRVRAGRLFLEIPSEFRTLAEKSLDMLIGITGWAEAKVAEKNIDSIAAVLIKEAKEAVRLGCKTFKIEARRSDKSFPFTSYEIGRETGAQIHMAGILTVDVHNPDIVLSVEVREKSVFVYGVEHTGRRGLPCGVSGRGLLLLSGGIDSPVAGYRMLFRGMKLDFLYFHSHPYTSPEAQQKVETLAEKLAEYGLGAYLNIVSFTKVQQQIKKTAPEAYLTLMMRMCMMKTAERIAKKVNAQCLITGESLAQVASQTVENLSVTNSCIDFPVFRPLIGMDKEEITALAIKIGTYETSILPYEDCCVLFSPKHPVLHTRLEDAFEIYNRMGIEPFLDEAFESCETKKIIGYGKKK
>NZ_CP042816.1|WP_024753475.1|1391646_1392933_+|arsenic-transporter
MIETQLIVSAVLFCGTYVLMIVLTNYRPVIACVSAAIFVVLGILPYTQVFAAIDWNVILMIAGTMGLVSLFTESQMPQRIADNIINRLPNVKWIIVCLSLFAGFISAFVDNVATVLMLAPIGIVLSKKLNMSPVKPIIAISISANLQGAATLVGDTTSILLGSHLNMNFFDFFWYLGRPSLFFIVEFTAIAATGIIYFIFRTSKETPEKVALTEVKDFFPSVLLVMMIILMIGASFLPEDKKPQTINGLICVGLFLIGILYTILRKRNYSILTVIKKEFSFETIFLLIGLFIVIAAITEAGLIRAIANVFLKLGTNVFLIYSVIVWGSVVISAFVDNIPYVATMLPIVQILSESLGVSSPILFFGLLSGATLGGNITPIGSSANIASLGILRNEGYQVKNTEFMGMAVPYTLTAVAIGYGLIWMTYGV
>NZ_CP042816.1|WP_024753474.1|1390140_1391376_+|hypothetical-protein
MKQSIAAFFLAFCFFSLFAKEAEQFTAKEYFEDLEKNTFSLDFTDKKIIDKVFALDNLKKHKAILIGEIHGVAANYTLKSEFLEYFTKAGYCNTLLEEAPVSHNLFLNKYLETGDEKILKTLFTIMRGTAYCTQEHYDFFKKLYQYNQTAPKKQRIRILAVDVEHQPILAYAAQHALLKEKKNLRLFSDLQSKLAAAAKKAQFPNNDPYAIAEECEKLLQENQKEAKNVLGKDYTLFALINRNILSRKKLDSCPPEQFNTIRDKQLYENFCALDLPKNTYFGVWGNLHVFQVPIDQVTYFAGHLTQNKNYSGKITSIAIQYIKSEFSNKDDNYLPYPCENRMLYFDDAYQQQLETDKGDIYIFRLNTKDSLFRRTDLNFQKADKGDPVISDVYQYLITVKNSPACKKYSGD
>NZ_CP042816.1|WP_148879698.1|1403134_1404388_+|ISNCY-family-transposase
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGICSPKKRRTRKKVHKTRNRRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTEEQVTQFGKIIKYLGIDMFPAHSSQAKGRVERLWQTLQSRLPVEFARRHITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNNLFKIEQNKFGAGATVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP042816.1|WP_148879699.1|1404518_1406207_+|DEAD/DEAH-box-helicase-family-protein
MSDALKPLIIQGDRSILLDVHTPEAQEARFSLIPFAELEKSPEHLHTYRLTPLSLWNAASAGFSAEQIMQTLIRFSRFTVPESILAWMKETISRYGKIRLLPTETSDTAEYLRLEAETEMIYKEIAASKSIAKFLTSDPSKKRSFILPVLHRGSVKQALLKQGWPVQDEVPLRDGAPLAIALKEKTSKNEALILRDYQKEAASSFVGDKSAGTGFGTIVLPCGAGKTVVGMLVMSMLQTDTLILTTNVAALYQWKRELLDKTDISENTIGLYSGETKEIRPVTLATYQILTWRKTTDSPFEHFELFRKRDWGLIIYDEVHLLPAPVFRITAELQIIRRLGLTATLIREDGCEGDVFSLVGPKRYDVPWKELEEAGWIAHAYCIEVRIALDSKKEIDYAIASQREKYRIASENPRKLPIIIKLLEKHADAQILIIGQYIAQLTEIATEIQAPVITGKMPNAEREILYNDFRMGKIKVLVVSKVANFAIDLPDASVAIQISGSFGSRQEEAQRLGRILRPKEESSYFYTLVTRQSVEEEFAEHRQKFLAEQGYEYSILTEDEIE
>NZ_CP042816.1|WP_148879700.1|1406565_1407396_+|diguanylate-cyclase
MRKTKSIHADKKIPIRINHDITQQLPLVFQTLKDSDKVVYFLYIDIDSFKTINEVWGHFAGDHLIEDVADIISSCLNYEDSAFHIGGDEFSVFHGGSKESALALADTILEKVSNTNFIWNENTFNICVSIGIVPITCSTAREQDVINAAQQATLEAYQTGGNAFKLFSPLEMKTYSTKNVGLWLQKIQNAVDNDGFVLYKQEIAPLNKELPNKKYEILLRMKDTDGSIIPLDSFIPAAEKYNMIYLIARWVIKHVFASVAKMKEIDHPDKNSVFQY
>NZ_CP042816.1|WP_081718837.1|1407358_1407850_+|EAL-domain-containing-protein
MTIPIKTVFFSINLSGASIFSNDIIDYVLKNIKKYDLSPDNFCFEITERSAIRNLDVTSAFVSALRKYGFAFSLDDFGTGFSSFPYLKTLPIDYVKIAGDFVRNIKFDYIDFSMVKAMREMCHRLGLYTIAEYIEDPEVLEILKDIKIDFGQGFLLARPVSLM
>NZ_CP042816.1|WP_148879701.1|1408620_1409424_-|SAM-dependent-methyltransferase
MKKKETGAEAFEAYYRDLFGARWEPLRKALLEESKQIAFSDGLRKPYYLDFASVQAARALPYSARGHCLDMCAAPGGKTLVLLRDVLGKDALLHANELSLARRRRLQEVIKTHLPPEENARVQISGFDAARMPRFKRNAYERILLDAPCSSERHLLRDQKYLTQWTESRVKSLSRRQWALISAAFLLLKPDGFLVYSTCALVPQENDMIIDKLIKKYGSEVIVEKISQDKLCEPTQFGIQYLPDTAEGAGPIYIARIKKSAKPALNS
>NZ_CP042816.1|WP_002696567.1|1409451_1410153_-|RNA-pseudouridine-synthase
MTSAQIARQNQESENQRIIYKDASLAVIIKKNGEDAQKFYQKYFLQHAYAQAVNRLDKPVSGLMLIACNSKIHTALSHAFSDGKIVKTYFAICEKPKKPTTDIPILVPQTCNDTLIFSSKKQKAFISDKKGAKEACLSWTLCARGENYDFLQVIPISGRTHQIRAQLAHIGRPIKGDLKYGAKRSEKTGGIRLHAYSLEFLHPVLHKPLHISTYPENMDALWAACIKSMGLTV
>NZ_CP042816.1|WP_024753488.1|1410464_1411589_-|hypothetical-protein
MKKKYSFFIFTVFISASLYPVATRGIEDYDHTDDKEPWHLLEWAKIAYEKEEFGKALLYTGSAADIQKETVQNKYALLEKALRSRQVQKVGDSILDIYAILKKREEIDACTILDEIFLTHSPQFFHNSMEKLLVWLKGTETFPECDYMSGKIYQIEGEYSQALSYYKKAWKNRAFLTVPDTRFDIIYSMADVSGLMKNNNEKEKYLLLVLTEDPVYGTTDFESSTLQAMIRTISTSNTVEKFFRLYRHHNPIAMKAYTELAAIYLQAGNLDRALAVSALAANIAVSSLDSFLHEADFTYRYQDLADLFIRTGSKPAILQWANGNNVWAIFIQFADLLFKKGYDEQVKDIYYKLAEKCPSFEHARLAAYRLSGTL
>NZ_CP042816.1|WP_024753487.1|1411585_1412713_-|(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MDFLRTTKKITIGGKGSTKKIEIGGDAPVSIQTMWKESLLGADLQKIAERITGLEALGCDILRFAVPDKESADAFVKLCTLTSMPLVADIHFDYTLALRCMDGPVAKIRINPGNIGSKERIKAVTDKAKDTGTAIRIGVNSGSLPTSITQEIAASGKTLSTHARAEALVKTALREAEYFDALNFDAVIISMKASTVEETVEANTLFAQQSDIPLHIGVTEAGPIISGIVKSTLAFSRLLDKNIGATVRVSLSDSMENEVIAAREILTECGKRREGIRLISCPRCGRLGFDVHAFVKRWQTELFSLKNTITIAVMGCVVNGPGEGKHADLGITGSENSVVIFKHGKVVRRLDVKNLSEQEKIAAIDAAFREELASL
>NZ_CP042816.1|WP_148878986.1|1412775_1413255_-|flagellar-protein-FlgN
MQMQTMSLTNEEIAHRVAILKRLRGLLEEQRDKFKEYLQVLEAQENSILKEDSEAILHHVELEESILTEINTIQKVIDPMEHLYKTVHTNTDETTIPHLKTDLAKLQNQVLARNKKNRDLLKEHLVDLRTKIASMQRPRYNTGVYTDSANIGNVINIVS
>NZ_CP042816.1|WP_002696573.1|1413257_1413698_-|flagellar-export-chaperone-FliS
MRYNDLSAYKEIDIRTAGQGTLILMLYDEGIKQISFAITLMDCPKIHATDIEKINNHILKAQEIITELSASLNLEEGGEIAANLLSIYTYFNQQLLQANIQKKIQPLITVKEMMNELRGAWEQIVNTSVAAPAADTKVSSGINIAG

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Crispr_ID: NZ_CP042816_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_6

1588273-1588435

Orphan

Consensus_repeat	Method
TTTTGACATGGACGTCAAAAACTCAGAACCGCCACGGACGGCGGTGGTTCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_6

>merge|NZ_CP042816|6|1588273-1588435|CRISPRCasFinder
TTTTGACATGGACGTCAAAAACTCAGAACCGCCACGGACGGCGGTGGTTCCACGCAGCAGCGACGTTTTAAAGCAAAGTAATTTACAAAGCTTTAAAACTCGCAAGTTTGGTTTTGACATGGACGTCAAAAACTCAGAACCGCCACGGGCGGCGGTGGTTCCA

>NZ_CP042816|6|6|1588273-1588435|CRISPRCasFinder
TTTTGACATGGACGTCAAAAACTCAGAACCGCCACGGACGGCGGTGGTTCCA	CGCAGCAGCGACGTTTTAAAGCAAAGTAATTTACAAAGCTTTAAAACTCGCAAGTTTGG
TTTTGACATGGACGTCAAAAACTCAGAACCGCCACGGGCGGCGGTGGTTCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_148878903.1\|1597424_1598021_-\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|224354
NZ_CP042816.1\|WP_002694856.1\|1598859_1601709_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP042816.1\|WP_148878907.1\|1602709_1602889_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752184.1\|1595708_1595990_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP042816.1\|WP_024753575.1\|1577286_1578465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_039943911.1\|1598017_1598797_-\|16S-rRNA-pseudouridine(516)-synthase	unknown	unknown	gnl\|CDD\|211327
NZ_CP042816.1\|WP_024753580.1\|1586673_1587606_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP042816.1\|WP_002694852.1\|1601870_1602323_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_002694883.1\|1582968_1584255_+\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_CP042816.1\|WP_024753577.1\|1581553_1582795_+\|peptidase-T	unknown	unknown	gnl\|CDD\|235484
NZ_CP042816.1\|WP_002694879.1\|1584551_1586681_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP042816.1\|WP_024753574.1\|1575623_1576403_-\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|369151
NZ_CP042816.1\|WP_024753581.1\|1588718_1590518_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP042816.1\|WP_148879745.1\|1597013_1597208_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024753582.1\|1592948_1595468_+\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
NZ_CP042816.1\|WP_148879428.1\|1574378_1575233_-\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|273146
NZ_CP042816.1\|WP_148879743.1\|1573081_1574386_-\|type-II-restriction-endonuclease	unknown	unknown	unknown
NZ_CP042816.1\|WP_024753576.1\|1578909_1580979_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|226114
NZ_CP042816.1\|WP_039943908.1\|1590575_1592384_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP042816.1\|WP_002694906.1\|1575246_1575459_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_148878903.1\|1597424_1598021_-\|CYTH-domain-containing-protein	gnl\|CDD\|224354	COG1437, CyaB, Adenylate cyclase, class 2 (thermophilic) [Nucleotide transport and metabolism].	2.16056e-20
NZ_CP042816.1\|WP_002694856.1\|1598859_1601709_-\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	7.4493e-05
NZ_CP042816.1\|WP_024752184.1\|1595708_1595990_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.32031e-06
NZ_CP042816.1\|WP_039943911.1\|1598017_1598797_-\|16S-rRNA-pseudouridine(516)-synthase	gnl\|CDD\|211327	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like. This group is comprised of eukaryotic and bacterial proteins similar to Escherichia coli RsuA. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RsuA makes psi516 in 16S RNA. Psi at this position is not generally conserved in other organisms.	1.11304e-85
NZ_CP042816.1\|WP_024753580.1\|1586673_1587606_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.20379e-40
NZ_CP042816.1\|WP_002694883.1\|1582968_1584255_+\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP042816.1\|WP_024753577.1\|1581553_1582795_+\|peptidase-T	gnl\|CDD\|235484	PRK05469, PRK05469, tripeptide aminopeptidase PepT.	0
NZ_CP042816.1\|WP_002694879.1\|1584551_1586681_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	7.59113e-71
NZ_CP042816.1\|WP_024753574.1\|1575623_1576403_-\|replication-initiator-protein-A	gnl\|CDD\|369151	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus. This of family of predicted proteins represents the N-terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids. Most proteins in this family are bacterial, but archaeal and eukaryotic members are also included.	4.23117e-28
NZ_CP042816.1\|WP_024753581.1\|1588718_1590518_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.33818e-155
NZ_CP042816.1\|WP_024753582.1\|1592948_1595468_+\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP042816.1\|WP_148879428.1\|1574378_1575233_-\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	4.71108e-94
NZ_CP042816.1\|WP_002694906.1\|1575246_1575459_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	1.68565e-13
NZ_CP042816.1\|WP_024753576.1\|1578909_1580979_-\|DUF262-domain-containing-protein	gnl\|CDD\|226114	COG3586, COG3586, Uncharacterized conserved protein [Function unknown].	1.42226e-34
NZ_CP042816.1\|WP_039943908.1\|1590575_1592384_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	9.51642e-173

>NZ_CP042816.1|WP_024753580.1|1586673_1587606_+|M23-family-metallopeptidase
MRKIVFSIIFLFFSLSFAISDKAAKLPESGWHITMPEKTAQGDFIAISFESSASLGNAAVTLYTPAGKKAKTVQAFPLDKTKKKFLALFGISIFWEEGMWQLEAKALRQGKPIQKKAELFIAKVNFPKEEIFLNAKNTGIAQNKSPKKKAQTEKLTEVLSAVNKDAPVFLGPFIMPISLRRRTSEFAEARVFKYSNGKQSASYHWGIDFGVPIGTPVNAPGNGRVVLAENRITTGWTVVLEHFPGMYTQYYHLSKLHVKQGDIVKQGTLIAATGNTGLSTGPHLHWEARINTTPVSPDALMKKPFYPVGE
>NZ_CP042816.1|WP_002694879.1|1584551_1586681_+|single-stranded-DNA-specific-exonuclease-RecJ
MIWNKKDIGKELVKELTQNYGCDALTASILVRRGIINGEDILFYLENDPRFFHNPFLFKNMEDAVDRILNAKDEGEKVLIFGDRDVDGITATTVLYEALIDMGLDAQWRVPSGDETYGLSNEVIDQFAEDYGTLIITVDCGISNMAEIAYAAEKGIDTIVVDHHTPQETLPPAAVIINHKIADCGYPQTDLSGCATAWKLAVALRFSRSELYKQEICLLTIVPENEAYTVHVLKLLNMVEIDRIAETIIPGMVRFDQTRLLAFLKGQQIFVWDGPLQKRLFEKAFGKNFELQYYDLQPDISKKFPQVSGMSLLRLKDLSRIGRYHKNKNDELDGFMNLFITYVQQTENLFTEREKRELQLVALSTIADLMELQGENRIIVKQGLAAMSTNPREGLKELLAKQKLLGKKLSTDDIGWQVSPLINATGRMGKPETAIELFLADTAEKRNEKANAIITMNEERKQLGAEGWDIAEPLARESLPRFSGNLAIAVSDKIHRGITGILSNRLANTLQVPVIVICILPDGTAIGSCRSARGYHLLALLEPSADLFYDYGGHNFAAGFSLAKEQLPELLHAFELYAAAMEFSEDGETEELIIDAELPHEYLTPKLLELADLFEPYGEKSPKLLFTASNIKILNVSALGKTEKVHLKLTLDCGTYKWPALYWNAVEKLNVDFAVGDSVDAVFTINRNSFNGTVTPQMIIQDMKRSAHA
>NZ_CP042816.1|WP_002694883.1|1582968_1584255_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MYEYHIEGGFPVKGTVKASGNKNAALPCIAAAVLTDEPVRLKNLPEIEDVGVMLDVFKAFGGSVEKKAPNEYELRLETVRSSEIPANEARKIRASILFAGPLLARTRKAILPPPGGDVIGRRRLDTHFLALTELGAQVHINGRFVFSANKLIGKDIFLDEASVTATENAVMAASMAEGTTIINNAASEPHVQDLCRLLTAMGAKISGIGSNILTIEGVPKLHGAEFTIGPDFMEIGSFIGLAAVTRGSLTITDVKPSDMRPIKLAFNKLGITWSIEGSTLTVPAQQSLQVNCDLGGMIPKIDDSPWPGFPPDLTSIMTVIATQVEGTVLIHEKMFESRMFFVDKLIGMGARIILCDPHRAVVSGPSTLHGSELVSPDVRAGMALVIAACCARGESIISNIYQIERGYEHLVEKLKSIGVQISRREVDS
>NZ_CP042816.1|WP_024753577.1|1581553_1582795_+|peptidase-T
MTTNDIKPKLLERLVRYTAIGTQSKAEKADQGIIPSSEVQWELAKLLVKELEDLGLKAELDEHCYVFARLPATEGCRQKKGFGLCAHMDTASDAPADTVKPQVHTDYDGKPIVLKDGFVIDPAHDADLAACIGDTIITSDGTTLLGADDKAGIAGIMTAVEFLLANPNIAHGPIEILFTPDEETGHGMDFVPLEKIQSKAFYTIDGGQEGEVEDECFNAYRSDIVFTGIAAHLGAARGKMVNAVTMAASFIESLPPQESPEATDGYYGFFCPLELEATAEKATLRVYIRDFGAIQERLKRIDTLAAAIEACYPNGKVSVTHTEQYRNMKTKLDTSPEILARLKEAVRRAGVEPKLKPIRGGTDGSRLTELGIPTPNLFTGGHNYHSRTEWASLNQMEKMCLSIIELAKIWAEE
>NZ_CP042816.1|WP_024753576.1|1578909_1580979_-|DUF262-domain-containing-protein
MDATKGNIYAILNGNKQFLIPVYQRYYSWETEQCSRLWNDIVDMQKKDKVGHFVGSIVNIAEQAMPTGVQKYMIIDGQQRLTTLSLLLIALRDYAEEHPEDGTINARRIDNMLLKNEYEDGDERYKLLLTETDRDLLISLVEKKPISDPGLSRILSNYNFFAGKIADMELQPKDVYEAIGKLQIVNITLDRNVDDAQAIFESLNSTGKELSESDLIRNYVLMGLEPSEQRYVYEHMWRPMELLFDYEKQDSVMDRFFRDYLTMKTTRIPKIDRVYEGFKAYHLNCEFSTIRELCADLLTYATYYTNMVFRRSDKPVLKSLYSDIGDLRMEVAFPFLLKVHNDCTEGVITEDDLIEIIKMCISYVFRRSICDIPTNSLNKTFATLRNEIKTDDYMNSIKAFFVLRDDYKEFPDDEKFEKAFVSRDIYNMRSRNFILSHLENFGNKAPIIIENYTIEHIMPQNSNPRDEWKTMLGANWKEVQKTYLHTIGNLTLTAYNSEMSDNPFMVKMDMEGGFKESALRLNAYLVKLTEWNEQHIKERAKLLAEKAEQIWTYPEITAAELAPYQVEEKPAQKYTIDSYDINAFTRTLFDMLDRRICNLSPDVKREFKKLYIAYKLDTNFVDIVVQKQRLRISLNMKFSEIHDPKGLCKDVTGLGRWGNGDVEVFFEHTSEIDDVMELIEQSYSKQADE
>NZ_CP042816.1|WP_024753575.1|1577286_1578465_-|hypothetical-protein
MDFDVLKKELAEHKVYTAWQFIENTNANIRVAQYCLDTITAISAKMTEDAHKNNEEISERIINHKSVAITDADLPDFLIDIAGNDVDGFFLIQKLIRDFYQYLRNSFDSIGQIANAGLLANKGKKVDKTDFPAMKDRFQQQTYSGEFPLTSAWFSKTDSDDEFKYIDAVCNRVKHTAFINNQISIGLFGCENKMNMGAFLRNGEQHEKADLKDKMQQAIKFTEDSYIEFLTFFSAEFKNDLHVSGRYHDGIKVYQQYMKDSELSSFSLPYIVSQQHFDAMPNEIYVLLLRNNEGEIKAADCPFTSILITSADDYKTAVGRYVATAEDTVGKDNIVKYRKYIKDTSTADPQIAMIKSMQDGTGKFYHANPFFDLQTVSVSDDDTFLKRAALPF
>NZ_CP042816.1|WP_024753574.1|1575623_1576403_-|replication-initiator-protein-A
MDFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTEISFKNNWIDKENRVFIYFTVEEIMRRRNISKPTAIKTLDELDNKKGIGLIERVRLGLGKPNIIYVKDFMSVFQAKGNGFQKSKNFTSEVKDVDLRSKENELQEVKNVDSNYIENNKSKYSKREYSFCKNGLGTFQNVFLTDEDISDLQIKLNAQLDNYIERLSAYIKSSGKSYKDHKATILSWFYKDQGKSKQAKTSNVPTWEEYNKGEYL
>NZ_CP042816.1|WP_002694906.1|1575246_1575459_-|helix-turn-helix-transcriptional-regulator
MNVSYQPLWKILEDKKMKKKDLIEIANISENCVANMGNNKYVSMANISRICEALECTPNDVFQFCASDKR
>NZ_CP042816.1|WP_148879428.1|1574378_1575233_-|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase
MTKNSRKKNIVLAPVVKWVGGKRQLLGDIVPLIPKTFSTYVEPFVGGGAVIFDIQPKKAIINDFNSELINIYKVIKEKPNELILALENHERLNSEEYFYEVRALDRNEKYGEINDIEKAARIIYLNKTCYNGLFRVNQAGQFNSPYGKYKNPNIVNMPVVLAMSKYFNENNIKIMNGDYKNSLKNLRKGAFVYFDPPYMPISSSSSFTGYTENGFDTKQQIELKEECDKLNSKGVKFLLSNSDHPFIRELYKDYEIITVKAKRSINSNGNKRGEINEVLVRNYD
>NZ_CP042816.1|WP_148879743.1|1573081_1574386_-|type-II-restriction-endonuclease
MIKMNVNEAWSKLFEKYDILNKIQSEGAFFITANQIKKFKEPRLMAKWDSSENLPSIFKKHNINILSISRNGYVLSDFKLYEPIPELGEHITEMQKVEIPEYETIDIGNISSEANAINVLMLSKILDDFLDEDDNVATFNGRMGTGIFSFRVDRHRGSSFKVDVKNAQCEIDGGMENNNSVVILEAKNVVHPDFHIRQLYYPYRLWASKVVKPIRLVFSIYSNQIYRLFEYVFEDKDNYSSIRLVKSKNYSLQDTDIALNELYDVYSDVKVIYDDNQNNTNIPFIQANSFERIISLMEILFEENKTTEEIAETMEFDLRQSDYYYNAGKYLGLFEKKDVEDEEKIVKKVSLSKLGKDTVKLRYKERQLKLVSLILEHEIFNKLFIKVYNSGELPTKKAIQNIMRENNVCNEGQIVRRSSSVYSWLKWIFNLQNI
>NZ_CP042816.1|WP_024753581.1|1588718_1590518_+|ABC-transporter-ATP-binding-protein
MKNLGLLFRYAKGFFLWYVFAFACTLLSRICMASQPLLIRLCIDSVIGDEPVPQNLLASVLSSIAPLGKNIKSLFVIGGAVLAFVSFAAILDYLKIIFGNTATEGVVKKLRNTLYNHIQLLPFSAHVQGSTGNLMQRCTSDIDTVRMALSSQIVDAFSSFFFICYIVYLMFGLSKKLMLLSLCIIPIILLFALFFFKKIQKTFKAAADAEAVMTTVIQENLTGVRVVKSCTAQKFEIDKFDAKSSAYRDCNFQVNNAFALFWSISDFLSYAQVSFVVLYGSVLAFHAEISLGTLIAFISYMMLIIYPVRGLGRLISNIGKAAVSAKRIAEVLDMPIESLFPTGEKPEIKGNINFDSVSFSYPQNKALDSVSFEIRAGETIGIMGPTGSGKSSLVHILTGLYDIDSGSILIDGIPIQKIDKGFLRSQIGIVLQEPFLYAKTIMENIKFALPEAPDELAIRYAKLASLHDEVMQFDDSYKTLVGERGVSLSGGQKQRLAIARTLIKNSPVIIFDDSLSAVDTETEHSIQQALSEFQGKKTIIIISHRISTVSSADKIIVLQKGKIVEQGSHQQLLAENGLYKRMYDIQVKIETDEAENKTE
>NZ_CP042816.1|WP_039943908.1|1590575_1592384_+|ABC-transporter-ATP-binding-protein
MGEFDTDEQRGLKKELWAGALAELKFYKKNFIAVLASGATLGVLNIISPLITRYVIDSMVKEKNMALFYPLVFSTFAYVTITAVIVFVYIRLAGNLEIKLCYNLRKKLFRKLQTLSLSFYDKNAVGWLMARMTSDINKLAGILAWGLTDLVWGIFMMISVVVVMFSLHAKLALLSLMSIPVVAVISFYLRNKILRSERKVRSINSQLTAAYNEDIQGAMTTKVLVREEYNAKEFLEKTETMRTASMRAIRLSGLLMPIVQIIECVGMVIVIVYGGSSVITSALSFGTLVAFLSFVTMFNEPFVGLAYLYGALISAQAAAERVFGLLAEQSDIKDNPAIIEKYGTVLEPTNAPLPKIIGNVKFEAVSFWYKKEESILENFNLTVQAGQTIALVGATGAGKSTIVNLLCRFYEPTTGRILIDGIDYTQMPETWVHQNLGYVLQSPQLFSGSIKENIRYGNPNASDEQIIEAAKIVNAHSFITEMEKGYDTETGEGGAMLSTGQKQLISFARTLVRDPKLFVLDEATASIDTETEQKIQHAISAVLKNRTSFIIAHRLSTIRNADIILVIENGTMKECGSHSELMKRKGHYYRLYTRQFLRDAIS
>NZ_CP042816.1|WP_024753582.1|1592948_1595468_+|endopeptidase-La
MGKNIDVVEKDEKMLDDTVDQEINETSMGKDKTQEEKVVNEKDTPKKGKKKDKKDLVSIDELLPPKVHVISLTGRPIYPGIFTPILVNETDDIKSVEEAYNGSGFIGLNLIKEETQNPSISDLYEVGCVARIIKKINLPDGGLNIFISTLKRYRIRKTVNESKPMVAAVQYLDDEEENTIEVKALVRGLIGEMKELSENNPLFSEEMRLNMINIDHPGKIADFIASILNISKEDQQKILEILNVRKRMEEVLIYIKKEKDLLEVQRKIQNDLDKRIEKNQREYFLREELKSIKSELGLVTDPKQRDEDKFRKLIDSFHFEGEVKETVESEYERLCMTDPNSPEYTVSKNYLETILALPWNEPEKEEYDLKTAQKILDEDHYGLEDVKKRMIEYLAVRKLRGDTKGSIILFVGPPGVGKTSVGKSIARSMNKPFFRFSVGGMNDEAEIKGHRRTYIGALPGKILQGLKVVKTKAPVFMIDEVDKIGNSVRGDPASALLEVLDPEQNIAFRDHYLDLPFDLSNIMFILTANTTDTIPRPLLDRAEVIKLSGYIDTEKAEIAKRHLIPKTLKKNGLQKSQVRYNKSGLLYLINSYAREAGVRNLEKNLDKIHRKLATQLVLGERETKDVFVPTKENLESFLGKPVFRDDDIKKASTPGTAVGLAWTSLGGDTLLIEAISTQGKASFKLTGQMGNVMKESAVIAWSWVRSYTTEKQLVDPDWFEKHQVHLHIPEGATPKDGPSAGITMTVTLLSLLTQQTIKQNLAMTGELSLTGQVLAIGGLKEKTIAARRNGIKEIIIPHANLRDLEEIPDHIKKGISFHPVETMDEVVALTFAKQFVPMK
>NZ_CP042816.1|WP_024752184.1|1595708_1595990_+|transposase
MRRYSQEFKQQALQLSDEIGTKEAAKNLGISYGTLTDWRKTKNRYKASDGAATAKAIVLDERERQLQREIKELKEANEILQGALAFFVKGWKK
>NZ_CP042816.1|WP_148879745.1|1597013_1597208_-|hypothetical-protein
MSKSERAWTPVVPRSSDVLKQDCLQSFKTRGLVFDTDVKIRTGTDSRGSTQKRCFKSTNFSKCF
>NZ_CP042816.1|WP_148878903.1|1597424_1598021_-|CYTH-domain-containing-protein
MKQRQSKMQEIELKARVHDREDIRLKILHNAKFNTAYIKKDSYWYLKTQCIRIRVQESTGTPQHVFITQKEKKIEDNIEVNTELEFELFPQSLAAFTLLLQNIGFTRKLTKEKHTQSFTSKIPCVLEGKTYPLHVELSNIPPLGDFIEIEILIPQTECSPSLIEKAKQFIKHFFTQLGLSEKDIEPRPYSALLQQTEK
>NZ_CP042816.1|WP_039943911.1|1598017_1598797_-|16S-rRNA-pseudouridine(516)-synthase
MRVDKILASNGYGSRKDVRVFLKKNNCCINGVRCINPAQHIDPTKDTFTVNGISVQLRTSVYIMLHKPAGCVSSTKDPIHKTVMDFLPAPFNAMDLFPIGRLDIDTEGLLIITNDGNLTHSITAPKSNCVKTYYLELERPLTETEIHNFTEKLAQGILLHTGYTCLPAALELTENIHTKNAQAFLIHITEGKYHQIKKMCTAFGVKLTYLKRVSMAGLELDPSLAAGNCRELTSEEITLLYRNAAAHKSKQKLTPDLKQ
>NZ_CP042816.1|WP_002694856.1|1598859_1601709_-|VCBS-repeat-containing-protein
MTTEKNNQTEHLESAENESMNTCHDEAMLAHENTTANSHVQTNTHKNAEELGEEKNNIQTEYHGGKTKNKKKRGFFFTLFKTLGIIFAALFILLTGLVIFSLINRTDPVAHFPEKFTSYVSIPSIGSFTQKVLHLKAIDVFLQDKNNASLRGTVRSLRSNPFFRSKSFLRLANIRLDVARYADGSMLGIADIGIRSVLTPFLPLIRKLYPDLENPIEEMQWQNDGKHSYWEYTLSQKEKLYIGLHKNLIIAANSYELFDSAFVQVQNKEIRRLAKTLHTGSDTTLRFLTDANHLIEKLGEQNTYIAGLKKEMTFPAVSVADLSIEDESINVSVHTSWKSDNQNVQALLQRKSHIPAILAKLPSSVAYYSLLNLGEPQFLWNNFEPFLEKDIIAAYKKADKAARFAFGQNIEQLLFSWMGDELGVFACENVRAPVFFIAVKDEKACKQSLERIYKSILVNQDISAVVDGVRIPRIVFPAWLSGLLRLFKIELVQPFYLIKDGFIYLSTSAEALRLTQRESDEGKLLVKTQKWKEILNTTPETSTLIYYTLERSIPFFLKGSDSLQSVLKMYGRGIASLTFSADNTITLELSARQSDAKSLTEIVGFPITLPTSPDSPLIIGRDAQNTPRALWASGKNICNMNLSNALLDTLPLDGTAGISAVMKGEKITSLWASSAAGSVYKFNQNLHPAAPFPLMTGEKFAAAPAAFDDMLIVPLQKEAELLFIHETGEILRSQPMHSKMKASPVCFENYIAAIPRSFESSIYLFDKQGNIIDGWPIPAAAITAVQPLVIRNNKNKAMLFIVTEDGQVRLTPLDQTDTAGFELTVNAVCKIPPVYSKTHRCFYLISNEGFLWKIDESGSIQDSIPLKGGIADDYCMTLLDLNQDGKEEVLVSGGGNALYAYFGDLAPVQGFPVEGTGNAGLIDIDGDGIKELITVGMDKRLHAYLSNFQ
>NZ_CP042816.1|WP_002694852.1|1601870_1602323_-|hypothetical-protein
MFEMNPSIIKQEHKGNAYYILTWSPLVKADKYKISTAVPSIAGLYELYRMDESKKLNLLSVTHAWYGGLRSNIRAAIDPDVGTDPERKKLLEDAQLYYRYAYSDSFDDLLDVVWFLHTGYFPDDIRVEPSGRYKKIFLQEKAPDKIFWLE
>NZ_CP042816.1|WP_148878907.1|1602709_1602889_+|hypothetical-protein
MVNCPRQSGGKLLTLCPMVSLLTLAKLVGEPKVAIPRVRPCSIPNDVLKHQHKTAKLKL

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Crispr_ID: NZ_CP042816_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_7

1698110-1698245

Orphan

Consensus_repeat	Method
TGACGTGTTATTGTAAACAGGCAAAACTCGTAGGCGAACCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_7

>merge|NZ_CP042816|7|1698110-1698245|CRISPRCasFinder
TGACGTGTTATTGTAAACAGGCAAAACTCGTAGGCGAACCAATGGTAGAATTCCTAAGGGTTCGCCCTTGCGAAATTCTGAACGATGTTTTGCCTGACGCGTTATTGTAAACAGGCAAAACTCGTAGGCGAACCAA

>NZ_CP042816|7|7|1698110-1698245|CRISPRCasFinder
TGACGTGTTATTGTAAACAGGCAAAACTCGTAGGCGAACCAA	TGGTAGAATTCCTAAGGGTTCGCCCTTGCGAAATTCTGAACGATGTTTTGCC
TGACGCGTTATTGTAAACAGGCAAAACTCGTAGGCGAACCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_024752594.1\|1687557_1689567_+\|flagellar-filament-capping-protein-FliD	unknown	unknown	gnl\|CDD\|235848
NZ_CP042816.1\|WP_024752607.1\|1704736_1706083_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP042816.1\|WP_024752595.1\|1689573_1690170_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224086
NZ_CP042816.1\|WP_081718746.1\|1690757_1691384_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042816.1\|WP_024752609.1\|1708047_1708848_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_002694950.1\|1704215_1704740_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226397
NZ_CP042816.1\|WP_148879757.1\|1701306_1702845_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|223528
NZ_CP042816.1\|WP_024752608.1\|1706752_1708036_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP042816.1\|WP_024752597.1\|1691927_1693106_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_044634554.1\|1695622_1695928_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_004266548.1\|1693121_1693808_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP042816.1\|WP_002695989.1\|1699136_1701110_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
NZ_CP042816.1\|WP_024752598.1\|1694819_1695623_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273230
NZ_CP042816.1\|WP_002694945.1\|1706079_1706760_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP042816.1\|WP_002694939.1\|1708853_1709732_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP042816.1\|WP_044634557.1\|1703149_1704226_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234894
NZ_CP042816.1\|WP_044634556.1\|1698326_1699124_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381680
NZ_CP042816.1\|WP_148879756.1\|1696102_1697680_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP042816.1\|WP_004266538.1\|1690185_1690449_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879969.1\|1693901_1694096_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_024752594.1\|1687557_1689567_+\|flagellar-filament-capping-protein-FliD	gnl\|CDD\|235848	PRK06664, fliD, flagellar hook-associated protein FliD; Validated.	0
NZ_CP042816.1\|WP_024752607.1\|1704736_1706083_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.23858e-73
NZ_CP042816.1\|WP_024752595.1\|1689573_1690170_+\|hypothetical-protein	gnl\|CDD\|224086	COG1164, COG1164, Oligoendopeptidase F [Amino acid transport and metabolism].	0.000620729
NZ_CP042816.1\|WP_081718746.1\|1690757_1691384_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.32886e-11
NZ_CP042816.1\|WP_002694950.1\|1704215_1704740_-\|hypothetical-protein	gnl\|CDD\|226397	COG3880, COG3880, Modulator of heat shock repressor CtsR, McsA [Signal transduction mechanisms].	2.56385e-20
NZ_CP042816.1\|WP_148879757.1\|1701306_1702845_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	1.50123e-21
NZ_CP042816.1\|WP_024752608.1\|1706752_1708036_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	4.3888e-79
NZ_CP042816.1\|WP_002694945.1\|1706079_1706760_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.92004e-98
NZ_CP042816.1\|WP_004266548.1\|1693121_1693808_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.71067e-61
NZ_CP042816.1\|WP_002695989.1\|1699136_1701110_+\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_CP042816.1\|WP_024752598.1\|1694819_1695623_+\|hypothetical-protein	gnl\|CDD\|273230	TIGR00713, Glutamate-1-semialdehyde_21-aminomutase, glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	0.000548463
NZ_CP042816.1\|WP_002694939.1\|1708853_1709732_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	8.72968e-116
NZ_CP042816.1\|WP_044634557.1\|1703149_1704226_-\|hypothetical-protein	gnl\|CDD\|234894	PRK01059, PRK01059, ATP:guanido phosphotransferase; Provisional.	1.91563e-51
NZ_CP042816.1\|WP_044634556.1\|1698326_1699124_+\|uracil-DNA-glycosylase	gnl\|CDD\|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	9.12419e-87
NZ_CP042816.1\|WP_148879756.1\|1696102_1697680_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	5.90855e-101

>NZ_CP042816.1|WP_148879756.1|1696102_1697680_+|ATP-binding-cassette-domain-containing-protein
MIKIENVEKQFADRKLFFIELLQIFSDEKIALIGDNGVGKTTLMKMISGQDSDFSGNIDITMNIQFVEKTLSDKLTATAVISDHNSTDSLSPGEAYQIRLFSAFENNTFLLMDEPTANLDFTAKERLIHKLNTRKQGFLLISHDRDFIEKTCSKIFELREEKIFVYKGSYHSYLEERANQKKFAQGEYEKYTKETERLSKMVDELTVRRDKIRTTPKRFGNSEARLHKMGGQSNKKKVDNRIKSVRSRIEQLAVKKKPIEEKKIVLSIPDHEKIHSKILIEGKKIRKSFGEKLIFDQADFYIDNTSKVALIGKNGSGKTTLLQMIINGEQIKKHPRLKIGYFGQLNQNLHFEKSIVENIRLTSIYDETLIRVLLARLGFRGDRVGERVKNLSDGERAKVQLAKMVSGDFNFLIFDEPTNYLEISAIEVLEEILQNYDRPFIFVSHDKAFINNVANRLLIIKNHKIKTITGNLKEYEKSDPPNINKMVLQFRMTEIFSKLSMEIPKEERVRLEAAYEELLKKLKNN
>NZ_CP042816.1|WP_044634554.1|1695622_1695928_+|hypothetical-protein
MLIFLKTGLLIIVIKLLFSAISVFLAIIAWKKIRTFASLFFLLGILFLYLLYLYLFVSMLGFIPTYPPFTGDISIVNIFFHIMPLVFFILALVNIIKDGKI
>NZ_CP042816.1|WP_024752598.1|1694819_1695623_+|hypothetical-protein
MIDYYNEIYTRFGTIRRARGFYLYTSKNIRLIDMYLDGGQSILGRRTGQKHLVFKQFLDRGLTCRLPTQAEINLKKAVNNFFPLMQVRWYETQKKAISICESITAKPAVIWKPFLPDKKIEENAFVLSLPFPADYGVVVFSSELTDIPESDALFPPMLQTLARAFFDLAAETKKYIEEKQRANLKTISFKKKDTDKKTLDNLIPYFWEQKEVYLFPKMPESAYTDFFQSALDAHILIAPEYHRPSILPRLNIYTELINFLKTQRGKV
>NZ_CP042816.1|WP_148879969.1|1693901_1694096_-|hypothetical-protein
MLKQQSERARTPVVPRRSDVLKAPPLSSAFKTRRHNFAMDGKIMPAVVTTYEHLTPVRVNTLPT
>NZ_CP042816.1|WP_004266548.1|1693121_1693808_+|RluA-family-pseudouridine-synthase
MNSNPKKEIPVLFENDSLFIINKPAGISVQGGAGISNCIIDILERQCAAKLFPVHRLDKETSGVLLIAKTSQAAAEYSKILQAKTIVKEYRAVCFYAPPKQRGSIRTPLRENGTEKTAVTDYRVLKKTENHSYLSLALHTGRKHQIRIHLASLGCPIILDDKYGDFKQNKALQKAFGIKKMQLSAYSLTLPLDGKSRQIIAPLPAHMTEALEKLELGGGTCNPVRDAL
>NZ_CP042816.1|WP_024752597.1|1691927_1693106_-|hypothetical-protein
MKLKKNLKIISVAAVFFITATVSLFADFMTSPTWGYALDLPEGFRLVQKEGNSRYLFQSEILPVDVQIALYPQTQFKTIDEAAQHIFTQLSAKKQITSFIWRDKPALNATLSFTADNKQMTGRLLTLQLADEKGWLVLLSYCEKEAEKRCEPLMLSALDAVFTDGASFFTPGPITTAAYPKKGLEKKTVSFHESKISVLFDKNDGQANQAVVDREFSILTLYRQNPEKVQAAWQRYYRMIYRDAWDRLAQFSFAIGTALPKEAKKDARKTAARILTWLQGFQYKRNPAGSDFINIPDAAIEKKGDCDVRGVLMAVVLQQMGIDTILMVSPQKSHALAAVDCKGKGARFQYNKKQYLIAETTASVEIGKIAADLADPALWFGVDFHTPQPNAE
>NZ_CP042816.1|WP_081718746.1|1690757_1691384_+|tetratricopeptide-repeat-protein
MVCFLFAFNFAFGQTQPDALKYYRNGRSMDSAGRRDDAQKAYSQAIAICRQELQANPKNMDSYTVYTWSLFRQGRYADTVIICNQALKIANDVRIIETLGEAQFFLGDYKESLRQMEKYIDMAPGGERISIAYFYVGEIYRLTKRFQKSDIAYSAAVHHEPSNPLWWYRLGITRENAGEKKAALEAYQRAVRLKGDYKEAAEGIRRLS
>NZ_CP042816.1|WP_004266538.1|1690185_1690449_+|hypothetical-protein
MLVKTIDNIKKKSSFIYYRKEFSATAHYQFLGSVKKGKIEFVVEVTPTGSNEIQIKLIDPVDYPILSVLRDLKKSVNRLVEEDKLPE
>NZ_CP042816.1|WP_024752595.1|1689573_1690170_+|hypothetical-protein
MEITINGEILQYTIEHEKTIGEVLGFIELQCKEAKATVAQVLVDGKELLPEELDDLFNKPLDTDIKIELSTLSGQDVKILIKSICTQLIDTAEKLKEIPLHMQSGEINNSLNLLSEFSELLNKLYYCFTLFDIAGIDPQLKIHEKSIEEYQTEISPLLPDLVQAVEENDIVTAGDIAEYELGPLVKDFASGLSSIHHI
>NZ_CP042816.1|WP_024752594.1|1687557_1689567_+|flagellar-filament-capping-protein-FliD
MSDISIPGVGTGKYDKLVETLMKKERVPRDRAAEQLKTYQIQSGSLAAVNKFSLDLRDVARSLYSFNNPFAEKLVSSSNEAAISATAGRDAKERNFQISVVQTAEADAFLSAEIDKNYKIPKGTYTFGIGDKTLSVNWKGGNYKDFIERVNSKGKGLLQVTEIKTTPETRSLLFKSLIPGKDNRLQFSDDALSFALQAGIIKKNDSATVQVDKVNLQVQPQSTAKAVFSQPVRAKDGSVLECTVQLNSSQQASSAQQEHSLDESGNPIYETPGEVSFKGVTVKNELSQAGLPPSIPDENTPQSGAAQQRRYDLLFLESVRGVALPMPPLADTTEPQKITIPLSEYGDVTALSVQNTNADVHLSIQNIKIIDPKVSGDYVPVSAVSQAQDAIINFEGIQITRSTNEINDLIPSVTLSLHDKTDKKETISIKPDIEAIKTSVIEFVAKYNRLLAEINIVTARKPAQGTQSKILEELTYLSEDERKVEEERLGSLSNDMTLLTLKNNLRQHMSNIYITDPESPIKSLAQIGISTNSEMRGGIQASRLRGYLEIDEKKLDDALKNNMELVKRLFGSDTDGDLLVDEGVAYQLYTQLNPYLERGGIFSTKANGISTRIGATEKRIEGYDKQLDKKEKDLKYKYEAMDGTLRSLQKQSESITNFNKSLQNQNKGN
>NZ_CP042816.1|WP_044634556.1|1698326_1699124_+|uracil-DNA-glycosylase
MTATEKLILYRFFKTSADYLRGYALSEEEPVFVDTEIAPAEAAQQDAAPAQNPSTEPHVLFQQAGQDSRFSTMADIAQAVHACRGCGLVATRIHAVPGEGPEELSRLQNSVEVMVIGEGPGADEDKTGRPFVGKAGQLLDKMLEAIQLSRKTNCYITNIVKCRPPQNRDPAPAECAACAQFLEAQIRLQKPLAILVFGRCAAQLLLNTTEGIGKLRGRFFDYNGIPLLATYHPSALLRDESLKRPAWEDLKKFRTQLLQLRAERV
>NZ_CP042816.1|WP_002695989.1|1699136_1701110_+|primosomal-protein-N'
MAQWLELIFNIPVYQSFTYKNLDEYKFESLKGRRAAVKFGSRNLIGFIIDEFDSLPAHFPVEEKDIKTVSRIVDKEALFGQEQIALAQWIAGFYLCSVGETLSAMLPSGRREASFENMSLDVQDFSASSLRLSEEQQRAITEITACKGSGFFYLYGVTGSGKTEVFLQAAEAVIREGKSVIYLVPEIALTHQVIDSVMERFGNIAAVLHSGLTVTKRFSEWMRIKRGDAKIVVGARSAIFAPVQKLGLIIIDEEHDGSYKSGSVPRYHARQVAMHLCVKESCALVMGSATPSVEAWHAMQEGKIRKLTLTKRLSGGAMPEIEVVPLYGEKTLLSERLIEAVRKVKEEGKQSILFLNRRGFSRFFYCRTCGFQLLCKHCSVPLTWHKKQGVMKCHYCGMQTEPPQVCPECGSLDVGYAGIGTEYVEEEVARNFPQCSIRRVDTDSVKPQELKKIITEFKNAEIDILLGTQMVAKGLNFPSVKLVGIALADTGLQMPDFRAAERSFALITQVAGRAGRYIPDGKVIVQTFAPGHPAIVCAVRADSEGFYAQELAQREALHFPPFARLARLVFRSKDEQKAAAAAEGAAKILGTLLSPEAELLGPAECMLSLIAGNYRRQLILRAKQIQPLQKALRQFVQGYKVMSGVYIEIDIDPMNLM
>NZ_CP042816.1|WP_148879757.1|1701306_1702845_+|NAD-dependent-epimerase/dehydratase-family-protein
MKKTVLITGASGSMGSAALKQIAETNKYNITILLREKKTNIKLAKVLKKRYREVLNVIFGDLSDFNTCEKCVRNADYIIHCAAIIPPAADHNPSQTYKSNFLATVNLINAAKASPKSAEVKFINIGTVAQYGNRTFKHPWIRTGDPLLPSPLDFYGATKTMAEREVIESGLKFWVSLRQSGVLYEKIMLNNMSDGIVFHTPWNTAIEWATAEMSGLLLKNILEKSDTETLSSEFWKKVYNIGNGKFARVTGFETLNRGFTMMGCSVKDIFKPNWNPPRNFHCGWFYDSKVLNEYLDFQHEGFEDFFLKLEKKFWYFKLGKPFRFLIRKLMIEPLLKTTNAPMYWIQSKDEKKIRAFFGSVEAFKKIPETWDEYNLLCENKNPQTGEYLDYEKIKDESLAGNLLLDHGYDETKPESSLDIKDIKKAAVFRGGKCLSSSMSVGDLYTPLKWECSCGHTFTATPYLVLKAGHWCPDCAAPPWNFDKLAKHSKFYAQVWYDDHDLDENNFYEKIVF
>NZ_CP042816.1|WP_044634557.1|1703149_1704226_-|hypothetical-protein
MITDSSAWYMETGPDIDIVLSTKVGISRNLLDFVFPSALNKEDAERVTILILDAFNQLPDAEKYNSLRLVAMDTIGKKILEERGILASDTEPVLSRAVIIHNDGAIAATSNIRDHLHLLSFSAGFAPEQTAKTILHVENILSKYLRFAAVKHYGYLTSNIYRIGSGMKNSILCSLPGLSLTGILQEEINKLAELGFEIHAYYAADSKLLLGWLYLISYGSSAGRTVKAQISFFHSYMQSLIEKERTARNYITEQKIYQIKDIIAKALALAKNAVLLDIKEAIDITLKIKLGISLNLIRYSSIQDCNALLYRVQTAHLAFLLLSGALSIDEDIPFDEIRVQRMRAIFVKKIFQRAELNY
>NZ_CP042816.1|WP_002694950.1|1704215_1704740_-|hypothetical-protein
MMKCKLCGTEGAEVFVQQIVQNKIKEMYICRDCAEKYGLYAKDNSNIDKAISHIFSHEEILNKENSAHDENSSAPSCPVCGSSLNDIQSKKMIGCPSCFFYFQNDVTRIMREKSVSIIYTDDVPRELSAPIPQAADISELKNNLARAIEMEKYELAAYYRDKLNELKEQIKYDH
>NZ_CP042816.1|WP_024752607.1|1704736_1706083_-|ABC-transporter-permease
MIKVPFLFALRFLGIGSGRSESNARKSLFGAVLGIGVSIIPLVIVLVVSDGMISGITSRMIELGSGHLQFVDLRPSTNYKNPQESYNQLQNNYATFKENCSNEYITGAWMQVNGNGIVIGKNGRKGGNIRAVSDNFFTENQAASQLLTVVAGSLEFTEKNSILLGKKIAEDLGITAGDSCRILTLFPSPTGKSIPKLFVGKVSGVISSGYQELDALWVFMPLETGMKILSPDAALASILVQTKDPFDQAAMQEIIQTGMSNLPRGYSPFSWQDMNRSQFHSFQTSKNILLFIMFLIVLVASANISSALVMLIMERRKEIAILKATGTKPETIIFSFLLAGLATGLGGLAIGMPIGITLSIHINEVFKYIEKTINALNMLLALSMGQSTATGEIHLLDPAYYLEYIPIVLNLNELYLIVSGTLILSVTVCMIPSIRAGKEKPIDIMRKL
>NZ_CP042816.1|WP_002694945.1|1706079_1706760_-|ABC-transporter-ATP-binding-protein
MNNPVLSVNNLYKSFTSASEDLHILTDLHLEIPSAAKIAITGESGCGKSTLLNIIGGMEAADSGKILAGSYNLLSLTEAELTEYRRHFLGLIFQFHYLLKDFTALENIMLPALIAGKNKKEIKERALSLIADVRLENRKDHFPAQLSGGERQRIAVARALINDPMLVLADEPTGNLDPQNAASVQDLLFSLTDKHGKTLLIVTHDPGIASMADSCYRLEHGKLVAV
>NZ_CP042816.1|WP_024752608.1|1706752_1708036_-|ABC-transporter-permease
MKLKSFQWIYFILKRFNAADTRGRSAITGIFSIAGISLGVTALIVILSVMNGFQMGFIDAILQVSSAHLRLSGAKTDIEHAEKFGGYVSFYRFSEAQTLMEGNFSRQQGALLRAVPTDLRAKDSGFNEIVKIMSGTFDLEKKNTVVLGYELARQLSIKTGDIITVLAVSGSSDTNIFPENNQLLVTGTFKTGYYEIDASFAFVSLETGTIICGESETYNAAVKLENPEHDSKYLHSLQKTIPSLHAESWRTYNRAFFGALRIEKNMMMLLVILIFLVVTVNIYNGMRRSIYERREEIAVLASLGARIQDIRFLFMCNGFTIGLIGGIIGLLLGLLLSAQINEVFFLIEVSINIIIHFIGSLVSNITEMPFAIFSPEYFYNVETIPVRIFFKETVFIFLFGVFSASSAAWFAARKILTLKPAEVLRYE
>NZ_CP042816.1|WP_024752609.1|1708047_1708848_-|hypothetical-protein
MQIRIAIFCFLFIISSIFLSADEKQSNANSRSSQSENNTTAKESDNQQKNEAETLDTAKKESDTEADQTSKKNELPTESDKNTSEKKEALKTNKLSGFSSIEDTGLTLADNDTWYYEEFDSLGRPSLAVLYSGANLAEKTEWKYESESLYPYSQTVTKDKQHVMTKYSAAGFLILKEVYNADNGLEQKIENTYNAKNELVSREETKGDVLYRREWTYEKGKKKSEIVYRNTVLQARIYFFDSYKMVHVYENDKEILKLKEALKEDR
>NZ_CP042816.1|WP_002694939.1|1708853_1709732_-|signal-recognition-particle-docking-protein-FtsY
MTKRRFSEGLKRLFGMHINLDDSFFENLTDSLVEGDVGAKTAFDIETLLRQECKKQKAETKDDIIRILTGILTPLIKTVTFMPEEKKTSVYLILGVNGVGKTTSIAKIANYYNKILTMPIVLAAADTFRAAAIEQLQYHGKALGLRVVAHQHGGDPGAVVFDAAEAIKAQGGGLVLADTAGRLHTKENLIRELGKIDKIAESKADTGCYKKILVLDATTGQNAFRQAEAFHEAISIDAIMLTKYDSTAKGGNAITISKELNIPMLFIGTGEQYSDIAPFDTKEFIKEFIGRD

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Crispr_ID: NZ_CP042816_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_8

1808657-1808794

Orphan

Consensus_repeat	Method
TAAATTTTCAAAACTTCGCCCCTGCTCAACTCCAAACGATGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_8

>merge|NZ_CP042816|8|1808657-1808794|CRISPRCasFinder
TAAATTTTCAAAACTTCGCCCCTGCTCAACTCCAAACGATGTTTTGCCTGATGCATTTATTCTAAACAGGCAAAACTCGTTGGCGAAGTTACAGTAAATTTTCAAAACTTCGCCCCTGCTCAATTCCAAACGATGTTT

>NZ_CP042816|8|8|1808657-1808794|CRISPRCasFinder
TAAATTTTCAAAACTTCGCCCCTGCTCAACTCCAAACGATGTTT	TGCCTGATGCATTTATTCTAAACAGGCAAAACTCGTTGGCGAAGTTACAG
TAAATTTTCAAAACTTCGCCCCTGCTCAATTCCAAACGATGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_044634654.1\|1820008_1820692_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277338
NZ_CP042816.1\|WP_002700565.1\|1798120_1798885_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_CP042816.1\|WP_024752402.1\|1798868_1799780_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP042816.1\|WP_044634961.1\|1809235_1810162_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP042816.1\|WP_148879767.1\|1789754_1795304_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP042816.1\|WP_044634962.1\|1800955_1802008_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|185614
NZ_CP042816.1\|WP_024752403.1\|1795320_1797654_+\|penicillin-binding-protein-1C	unknown	unknown	gnl\|CDD\|273954
NZ_CP042816.1\|WP_002699093.1\|1823978_1824812_-\|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein	unknown	unknown	gnl\|CDD\|235747
NZ_CP042816.1\|WP_024752392.1\|1819240_1819894_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP042816.1\|WP_024752389.1\|1822430_1823933_-\|NADPH-dependent-glutamate-synthase	unknown	unknown	gnl\|CDD\|236967
NZ_CP042816.1\|WP_024752400.1\|1804136_1805432_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381615
NZ_CP042816.1\|WP_148878890.1\|1813005_1815213_+\|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl\|CDD\|379625
NZ_CP042816.1\|WP_024752393.1\|1817236_1818565_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP042816.1\|WP_081718726.1\|1811231_1812908_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270301
NZ_CP042816.1\|WP_024752398.1\|1807685_1808456_+\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP042816.1\|WP_002695130.1\|1805520_1806834_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NZ_CP042816.1\|WP_148878912.1\|1815561_1816758_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP042816.1\|WP_024752390.1\|1821094_1821967_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275383
NZ_CP042816.1\|WP_148879425.1\|1803243_1804140_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|372510
NZ_CP042816.1\|WP_148879768.1\|1799833_1800349_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_044634654.1\|1820008_1820692_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|277338	cd07392, MPP_PAE1087, Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	5.14503e-62
NZ_CP042816.1\|WP_002700565.1\|1798120_1798885_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	7.13699e-87
NZ_CP042816.1\|WP_024752402.1\|1798868_1799780_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	3.47818e-78
NZ_CP042816.1\|WP_044634961.1\|1809235_1810162_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	6.71123e-116
NZ_CP042816.1\|WP_148879767.1\|1789754_1795304_+\|hypothetical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	6.81509e-163
NZ_CP042816.1\|WP_044634962.1\|1800955_1802008_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|185614	PTZ00434, PTZ00434, cytosolic glyceraldehyde 3-phosphate dehydrogenase; Provisional.	0
NZ_CP042816.1\|WP_024752403.1\|1795320_1797654_+\|penicillin-binding-protein-1C	gnl\|CDD\|273954	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP042816.1\|WP_002699093.1\|1823978_1824812_-\|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein	gnl\|CDD\|235747	PRK06222, PRK06222, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein.	4.95594e-164
NZ_CP042816.1\|WP_024752392.1\|1819240_1819894_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.13627e-73
NZ_CP042816.1\|WP_024752389.1\|1822430_1823933_-\|NADPH-dependent-glutamate-synthase	gnl\|CDD\|236967	PRK11749, PRK11749, dihydropyrimidine dehydrogenase subunit A; Provisional.	0
NZ_CP042816.1\|WP_024752400.1\|1804136_1805432_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381615	cd16894, MltD-like, Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).	6.82475e-58
NZ_CP042816.1\|WP_148878890.1\|1813005_1815213_+\|glycoside-hydrolase-family-95-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	1.24248e-44
NZ_CP042816.1\|WP_024752393.1\|1817236_1818565_-\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.29084e-25
NZ_CP042816.1\|WP_081718726.1\|1811231_1812908_+\|extracellular-solute-binding-protein	gnl\|CDD\|270301	cd13583, PBP2_AlgQ_like_4, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.2221e-63
NZ_CP042816.1\|WP_024752398.1\|1807685_1808456_+\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	4.5113e-35
NZ_CP042816.1\|WP_002695130.1\|1805520_1806834_+\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	1.50254e-31
NZ_CP042816.1\|WP_148878912.1\|1815561_1816758_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.50093e-24
NZ_CP042816.1\|WP_024752390.1\|1821094_1821967_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275383	sd00036, LRR_3, leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	4.3118e-21
NZ_CP042816.1\|WP_148879425.1\|1803243_1804140_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|372510	pfam13176, TPR_7, Tetratricopeptide repeat.	0.00142525
NZ_CP042816.1\|WP_148879768.1\|1799833_1800349_+\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	2.08838e-33

>NZ_CP042816.1|WP_024752398.1|1807685_1808456_+|ComF-family-protein
MKRFAFILTDVLAAFYANLLCPQQCAVCGEDTFRAIPLCKKCAERLLSTQLQYPLVHPELFCACCGRELISEQEYCTACHSAIFAAETFVSPIQKTFALFPYIGLGQKLLPLWKNKEIRSFAPLFSKLIGEFIQTAQRLCMLPADIAIVPVPPRPKKLRKKGWDQIEDLARRLEASGFSINRCLTRKDGTAQKQLSRKERQTNLSGKIAVGGKKRIPEKLLIIDDVMTTGATLNTCAEVLKNSGCKEIYALCLFYD
>NZ_CP042816.1|WP_002695130.1|1805520_1806834_+|OmpA-family-protein
MKKKYNFFLVIVSFFLFSTFAEEDAIGATVVQDWENTTIDSKISLDINKEALHLPADRNTALARIHQESPRLMKDVYLSVLVDSSNRMGDYLAEKQITMNDINKLIEEGTETPAAFSQDLKDLTLYHQAKLGKAGELFVKHSVPYKPAVPPSSTVSKVYSGILIDARGNLPVHGEYETETLQPCLFPKVWDTDMNLIYEKNMVLPAIAKKQGIIRYASALNEKDYRDIIGVNPLRIVARGVFGQNRTDPIIAGSDAAQILAKPENLKLLEEGKLIIICNKENLRTSLPYPLPDENFYFAYHNIKKMFSKETPDSINMRPGINTIKITMYDIRFIADSPEILPEEKGRVDIIARALRAMGPYTKFLIEGHTADINQPKNQLVLSVARADKIAEELAKRGIDASRMTTAGYGGTRPIAPNDTSPNRAKNRRVEITIMRD
>NZ_CP042816.1|WP_024752400.1|1804136_1805432_+|lytic-transglycosylase-domain-containing-protein
MRKKIGFYAFLLIHLFGFSSLSPSIQNRDRQPPEGFFAAVGILKSTQINSLFNGPLLLVSNPLIERFKKQYTTEGGLRYLSSIMQRSSPYRNFIIEELAQANLPPELLFLPVIESGFSEKAVSKSGAVGIWQFMRNSIGGYDIHINDWMDERRDPWKTSIAAIKKLKWNYEQLRDWPLALAAYNCGMGAINKAIKKAGQADYWYLCEKGFLKRETVLYVPKFLAIAEILSRSSEYGIDWGDPTIHPETTTITVKRAIDVVMLAEKIGADANDLKKINPSLKHAITPPNTKYPLRIPVAYEQATKQLLNNKSSILIKYYLYKIRSGDTLYALANHYGVSVDSIINYNKGLKPSALRLGQTIVIPALKTVHEYRGKNPSENIDFSGKYVVRKGDTLWSIALAYNVQVETLAEKNKLSVNSILSLGKVLNVPIQ
>NZ_CP042816.1|WP_148879425.1|1803243_1804140_+|tetratricopeptide-repeat-protein
MRFALIDKIAANLRQEKQYKTLTVFLGNIINTDQKNPYTAYWLLMLGYCYQEQNMPEIAACYFERIIQNYHDIEIQEKSIHLLCLQNLIKLSKDPLRQVNYYSRLLSEFYTSIDPAYAYFMLGRAYEGLGEWQAAIQTYTQFLSLKRYDVIIQGIPDSFGYASKIVNYNAAASSKNWTFASLDDLVKTITAAIHKGAPNTLENYRSKVDFFAMSWKQEQAEKQEQPYFNLESFMAGRRIRVASSLDPSSTPYEAYLRTSGWNQYISTWYLCFKKINFPPNPDIHDRWEWAGVYYGEKQ
>NZ_CP042816.1|WP_044634962.1|1800955_1802008_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MKIAINGFGRIGRLVFQALAEQDLLGKDKYDVVAVVDLSTDAKYFAYQLKYDSVQGKMKAKIETAADDVLVINGHQIKCISGKGLSPEQLPWKDLGVDVVIEATGIYANEKAYGHIDAGAKKVIITAPGKSSNPDKPIKTFVMGVNENEYDAAKHNVISNASCTTNCLAPVVHVILKEGFGIETGLMTTIHAYTATQKTVDGVSQKDWRGGRAAAINIIPSTTGAAKAVGEVLPSTKGKLTGMSFRVPTPTGSVVDLTFRTEKNTSIEELDAAFKKASETYMKGVLGYCDEEIVSTDIIHDKRSSIYDSKATLQNNLPGEKRFFKVVSWYDNEWGYSNRVIDLLNFISKK
>NZ_CP042816.1|WP_148879768.1|1799833_1800349_+|transcriptional-repressor
MNGIIFSSLYVNSLRIHTRIDIIVDMEGSTLSNKKLRKTKARRKILSLFMTEGIIKTAEEVYALCSAEMAINLSTVYRTLNTLAESGILIKSIRQDGTACFQRPCTNEAHHHHLVCVECRTMVDIDDCPITEIENKISKETGFLITGHTVELSGLCPDCLQRKKNQTPITK
>NZ_CP042816.1|WP_024752402.1|1798868_1799780_+|ParB/RepB/Spo0J-family-partition-protein
MAKKSKLGKGIDALMEDPSVMADFDGSTGQSAAGDEVIKLDPELLKPNPFQPRKTFNQENLRELADSIREHGIIQPIIAGKNAEGEFFIIAGERRTRASILAGLKEVPVVLREFDNAQKLEVALIENIQREDLNPIEEALAYQSIMQMNQINQEETAKKIGKSRSTVANALRLLKLPEEMQNAIEDGRITAGHARAILSLVNPADMQILFNRITSSNLSVRDAENQAAVLNKGGRIAKKETADSFIDSPKESGFSEIKHLEQQLIDALGTKVQIKGDIEKGVIYISYFTRDDLDSIYEKLSSE
>NZ_CP042816.1|WP_002700565.1|1798120_1798885_+|ParA-family-protein
MGKTLVFVNQKGGVGKTTSAVNLGAYLALAGKKTLLIDFDPQGNMSSGVGIANVKPTIYDLLAEASEIKQTIRPTAIQNLFAIPASIDLSGATIELVDENHREYYLKNIIAKIKDAYDYILIDCPPSLGILTLNGLVAADEVFIPLQCEYFALEGLTLLLQTVKRVQVKLNPDLTIGGIFFTMYDSRTKLAQEVVQQVSGYFKDRVFSTIIPRNVKLSEAPSHGLPICAYDPGCAGARSYEKLAKEVLERGKKK
>NZ_CP042816.1|WP_024752403.1|1795320_1797654_+|penicillin-binding-protein-1C
MKRQVPFVQYKKEPQLAASFRSMLTAISIAGALAGAALFLLVSVCPRFAVPYSFTLYDKRDALLGASVADDGQWRFPPPKTIPESYKIALILYEDSFFYLHPGFDPIAIGRAFFSNFRAGRIVSGGSTITMQTVRLSQQQAPRTLPQKIKEVFLSCILELMYSKESILYLYAAHAPYGGNVVGLEAASWRYFERSPEQLTWAEACTLAVLPNQPSLVRPGLQKEKLKAKRDMLLKRLYQRKYIDLQTYKLSLAEPVPEAPRPLPQAAPHYLQFIKQQQKNRTEKYSSGIDAHIQTTALAITSRHAEKLAEQGVANLAAIIIDNATGLPIAYIGNAARNPRQNADVDMIQARRSSGSLLKPFLFAGLLDAGMLLPDQLMIDLPTRVGSYIPQNNSNAYSGAVPASEALSMSLNIPFVRALQAYTIPAFLHLLKRCGFTTFDRTADEYGLPLILGGGELTLYQAVLAYRAMLLQSMHRQPDKQYPLSSGACRLAFEALIQGNRPGEEALWLSYASSQKIAWKTGTSFGNRDAWSIGVTPLFTVGVWAGNATGEGNPAIKSAAAAAPLMFELFSILPTSSWESKNPDDFERIQVCANSGYLAGIYCEKKTQMLKPKDAQSGTICPYCRAVSLTPDGAYQAIAADIPVLPKIENRFVLPAGIAYYYAKQHRTYAPLPPWLPKSAGNTAPEFDILFPQPAAQVFIPIEIEGSLGAMTAEAVHSDPNAIIYWDLDGTYLGKTQAYHQWNIQAPKGEHLLTLTDNRGRQIRRRFTVLPRHRTQP
>NZ_CP042816.1|WP_148879767.1|1789754_1795304_+|hypothetical-protein
MKNFLKNIFSAACITAVLVSGLLIACSKQQENFTADSADAIASMSPALIGRMDPILIQFKEAPAQIDKIGKAASFTPSLTGEWSVVDATTVRFMPTAPYTPESEISLRLDMGVLKGLSANKEGFMTTFSVAPAALIVTADTPSFSLNSSQLLIEGTVQTDIDCDAETVQKMIQAKLIAKKGTKDIPLSVSGGEDKRRFSFVINNIERLDEDQQMHIEWDGAAIGAKTKSSTSFIIPSKTQFSILSFSVSDDSTAEVCFSDPIDKSQNLNEFIGITSASNFNYRWNIDSNKLIVYVTGISWPDDAVLTIGSGIKSVDDKLLKKEAQFQLGSGWDIPSISFADDGVIIPSSKDALVVVNTKNITGMLIEAFQIYNFNMLQFLQENSFDEHSYLRNVGDPVWKSSIDFEWKPDMKNRVVARGFDIGDLVKKFPDGMFNLRISFAKRHSMYEPKRKAEDFSNLPFPSDDITDNSSYDSSYWKTAGLTYEQRNEFWEQRKNPCHPAFYLYYNDDIVKTKNILVSNLGLMAKKDSKDAYHITVTDLIEGKPVSGAAVKAYSYSQKELAQGKSDSDGNVRLSSEKEIAFITAEKGSDQAWLKVNYGALSISHFQVDGVEAKEGVKGFLYGERGVWRPGDAVHLVFVLQDLQKTLPKDFPVTFTLEDPMGKIIDRQIFTQSVDGFYRIDTKTSASDTTGSWTARIKAGGNTWTKSLKIESIVPNRLFVQLKPRGDYLVSGENHINVTGEWLHGATASNLKTEITGRFVVNPDPFPQFPQYVFTNNERKFGSTNEQLWSGKLDENGTATAILQLHTKQEAPGKLKAIFETRIYEPSGAFSIENKTFDLSPYPQYVGLRIPLDKDNGRDFLLTDKKHSVDFVVVNPEGKSITSASSLDIQMYKLEWRWWWEKDAYSDAGYRSNRSTKLVKSGKVPVQNGKAVWDFEITGDDWGRYLIVAKDAQGHSTSDVIYVDTPWWSSRGGDGSSGASAMLMLSSGKEQYLSNESAEISFTSAEGAQALITVEKNGTVLSQQWMKTVKGSNKFTLPLKKEMAPNVYVHVSLLQAYQQTKNSLPIRLYGIIPIMVENPDTRLSPAIQAAKEFEPNQKASFTISESKGKPMTVTVAVVDEGLLGLTSYRTPNPWNSFYQKEASALKSWDIFSYVSGSFGGKLETLLAIGGGDFIERKGGKDSERFKPVVFFFGPYELKANEKKNIEFDMPQYIGSVRIMAVAGKNGAYGIAENTVKVKSDLMVMPTLPRTIGIGEQIDVPITVFNGTASQKEATVRLNTEGILTLSETKKLSVPSNGNANALFTIKPETSGSITIKAEASASGIAKKAHAQTIIQTLSRGFPYTTQELVSVEPGKTVTVNIDSPGEAGTKKLSAEISQMPALGLERRLSFLLEYPHGCLEQITSRAFPQLYLSSMLQMSQEEIRKTKDNVQSVIDRYPNYQMRSGGFAYWPGGMNESLWATNYAGHFMIEAKRQGYYIDDTIYQPWLEYQIAKAKNWSVGYLQNPADQAYRLYTLALAGKADIGAMNRLKKVKDLSVSAKTMLAAAYALSGQDSAAKTLMREVALEPNSYRNSGGSWDSSTRDTALTVYTLRTVNDNAQALSLVPKLAKICSSNSWLSTQEIAWILISIAPYYSYDKSKQVAYTIKTNGQTVKDSLEAASRLYSLPASDKNTQTLTIQNTGKTILYATISTATSVPPGEEKAAQSGLSLWVSYQNNQKEFVQPHELKNGDRFTVEVRVKNTTAKAVENVALVLPIPTGWEYTNKRLAENTGDDKSSKELNSQSDYQDIRDTHIYTYFDMNPNELKSFTFEGTVTYGGVYYVPAAYAEAMYDPAYRAVVPGEKFSASRAQ
>NZ_CP042816.1|WP_044634961.1|1809235_1810162_+|sugar-ABC-transporter-permease
MEQNKIRSKNSLKKIREHKTLLFMILPGLVSVFIFSYIPMYGIIIAFQNYNPMKGFFGSDFVGLKYFRQFIQNPYLFRLLRNTLLLGIYSLLWGFPASIILALLLDQLKNRHFKKLVQTISYMPYFISVIVVVGIISNFCAIDDGIFNKLRIWLGLEQISYLTNPAYFRTIFISSGIWQGIGWGSIIYLAALSKIDPNLIEAATIDGANRLQKVRHITWPAILPTTTIMLILSISGILQTNFQKVLLLYSEATYETADVISTYVYREGILGGRFEYTTAIGLLMSFVSFILLVLANTISKRLTENSLW
>NZ_CP042816.1|WP_081718726.1|1811231_1812908_+|extracellular-solute-binding-protein
MLRLHVWKLITGHDNRTVKLILTLRRVIMKLWKFLSVLVVAALLIGCSDEKAKTDSDTGKLSFSVTTVDFGQRPTGTLIQNEWLKLMSEKMGKELDIKFEFVAMGDYGEKLKIMNAGGDIADVLSIFAMSKTDVDKYGKQGLYVDLSKHLDKMPHYKAALEKDPNSKYLYAPNGALYGAFNLALVSKSSVHSKSYSVMAIKSKVFKDNNIKVPETLDEVYAGAKKLKELNVSRYPIILHEEWQNPESTVFNAYHTASDRFYDGKKFAYGPVSDDYKRALQYMNKIYKEGLISPDYFNQKSSDGSAALSKGTACIILSCWEGYPARWKTEFPDDEWVAIPLPSSEAYPDNPWQFEREFPSDYNLDAGYSIVVSSKAKNLDEILKFIDFQYDDAIISLLNWGIEGTTFTVAENGEKILIGENTSETNRKMISYGMPLSSACRSGIFPQPQDMVVWRVAAEPKIPLYYKGEYFFEKLVPFCSARITPQNTSPNDNVPKIKLSEDELEEYATIMTPVSTFAREQKALFIKGDQPFSQWDNYLKKLNSMGDIEKAMNLYNSKL
>NZ_CP042816.1|WP_148878890.1|1813005_1815213_+|glycoside-hydrolase-family-95-protein
MMQTKKAKCIIRVLFLLCLTRTHLFAKEKNQSLGIRDMKLYYTKAAEQTAEGWEQKSLPIGNGFIGASIFGGIRREYLHLNEKTLWTGGPCKKRPNYSGGNKTGVDENGYTPADYFAKIRTLFSEGKDAEAAALCDKLVGEKASEGYGAYQSFGKFFIDFYYSAHTALSEPPAEIKAYRRELDLNQALVEVRYQYNTTEYRRMYFANYPSNVLAGKITASNPVLHCSVHFESDQGGSISYTQNGFTLSGKVEDNDLEFLLRCRIRTDGITTCSDKGISITQASFLEFFLCSATDYSDSYPKYRTGFPPHIDEANLNKSFDALLAEHIKDYCPLFDRCRLNIGQDSEPDMPTDVLLSEYKNGKFSRKLEDLLFQYGRYLLLSSSREKNILPANLQGMWNNSNSPPWASDYHLNINLQMNYWLACVTGLPECCIPLVKYVAALEKPAERTAKAYTGLDGGLMIHTQNTPFGWTCPGWSFDWGWSPAAFPWILQNLWQYYCASGDFTRLKEIIYPLFKKEMQFYTAVLVFDKKQNRLVSSPTYSPEHGPRTNGNTYEQSLIWELFKQGIEAAKLCGEKKALIAQWKKVQENLKPIVIGKSGQILEWYTEEELGSIGEKHHRHISHLLGVYPGTLITKEDTDLAAAAKRSLESRGDKSTGWAMAQRILTWARLGEGKRAYAILQTMIQTCIYDNLLATHPPFQIDGNFGLTAAIAELFLHCADSLPDEWQGATLHTAKQ
>NZ_CP042816.1|WP_148878912.1|1815561_1816758_-|IS630-family-transposase
MPKPPSKLELNPEELTYLESLVRLRTIQAQTLTRARILLLKSKGLSIKETADKVGYTYRSVALCLKKYKQGGVEHALTDAPGRGNNPEITDEEKSWIINLACQKPTTFGYAAETWTYALLTKHINTTAESAGYLRLATIHKTTVFKILTEADIKPYKIEYYCENRDPDFDRKMHNVLLVYKQLELYFEENKPLQTEEGKNIHVVSYDEKPGIQAIATTSDDLPADETHQCIRRDYEYKRLGTLSLLAGIDLQTGDAIPLVSDSHTSKDYVQFLKILDERYPQEDKIRIILDNLKVHTSKETIRYLSTVPGRFEFVFTPKHGSWLNMIEGFFSKLTRQLLRGMRVKSKTELVNRLYKYFDEINEEPVVFHWKYNLDDLDVSEAVITDALKYELNYKTLY
>NZ_CP042816.1|WP_024752393.1|1817236_1818565_-|ATP-binding-protein
MFKRKTYQQLLEWKNNSKGKTALLIEGARRVGKSTVVTEFAKNEYESYLIIDFAFAPKNIHLLFEDVSDLNYLFLQLQLQYGVNLQERKSLIVFDEVQFCPKARQAIKLLVADHRYDYIETGSLISIRKNVENILIPSEERHINMYPMDFEEFLWATGDTVTTELLHGIFKKNTSVGDALNRELMRKFRLYMLVGGMPQAVNTYIEENNLARVDEIKRDIIRLYFDDFYKIDSTGKISALYKAIPAELSRKATRYQVGSVLPYERASTISEELAELIASNTVLPAYHANDPGAGLAANMDTRKFKLYLSDTGLMVTLMFEDRPFTENSIYKKLLSDRLPANLGILYENIAAQTLAAKGESLYYHTFPNENSTKNYEIDFVLARGNKICPIEVKSSGYKAHTSLDKFSEKYSARIGKKYLLYTKDLAKSQDVLYLPFYLAQFI
>NZ_CP042816.1|WP_024752392.1|1819240_1819894_+|response-regulator-transcription-factor
MKIAIIDDERLIREGLKIIFSAYPDIEVVGIGSDGNEAFDICKTHAPDLILLDIRMPNYNGVDATKKIKEQYPNIKILILTTFTDIDYIQQALKNGASGYLLKDSAPDVIYDGIKAALSGNVVINPEIAQNILLGKAEKREPKTEEEITTLANEYELTQKEIEIIKLVAEGFSNKEIAHKQQLSEGTIKNNISVIFSKTFVADRTQLALFAFKNGIV
>NZ_CP042816.1|WP_044634654.1|1820008_1820692_+|serine/threonine-protein-phosphatase
MKVLIISDGHGAIDNLRLLKSEAEQCDFVIFGGDFAAFNKPETGLPFLKELVKLHDTVFAVLGNCDEPDFIEHLDAAGISIEKSLSQYEGLMLTGSGGGSKFTGTTPYERTDEELVSDLHLVEENFSEDEAPINNLIVVAHNPPHKTKLDKVAPLVHVGSPLIRSFIEKHQPLLVVSGHIHESFATDTLGNSVLVNPGALVEGRYARAEINGNKKQGFSVSVELKQL
>NZ_CP042816.1|WP_024752390.1|1821094_1821967_-|leucine-rich-repeat-domain-containing-protein
MKTKTRYRQKRLFYPLIRLNLVLAIILTFLSCATSPQKRGFIMDNSGTVLCYAGPEITTLVIPPHAKGRAISAIGDKAFFMRTGIITLDFSHCRTLTSIGDEAFFGCESISNLDFSNCPALVVIGTQAFANCYGIANLKLSGCRSLASIKESAFVDCKSLAVIDFSGCTALTDINESAFAGCENIIRINFSECTGLTSIEKAAFANCLNLTNADLSACTMLNSIGTWAFSGCPRTVVTLPASISEIAEDAFGTVDSIADYRCKEVIVPNESVKKLVTDSGYTGKITVQSR
>NZ_CP042816.1|WP_024752389.1|1822430_1823933_-|NADPH-dependent-glutamate-synthase
MEQKYTEHVSAEILASEAKKYWQELKDKELKMKDRAQIPVQEMPTLDPKERATLMDEVAMGYTVEQAQIEANRCLNCKNEPCVKGCPVGVRIPEFIMEIQKGNFKASVDIIKTTNLLPAICGRVCPQEKQCQLVCTVGKMLKSVEKSVAIGRLERFVADWEREQNQVTIPECAPPTGKKVAVIGSGPAGLTVAADTARAGHEVTVFEAFHKTGGVMVYGIPEFRLPKEIVAKETDNLKKMGVQFKMNFLVGRTATIDQLFNDYKFDAVFIGSGAGLPRFMNIEGEDLIGVFSANEYLTRANLMKAYEHTKADTPLYPADTIAVIGGGNVAMDAARMGLRLGAKKVYCIYRRTRNEMPARLEEIAHAEEEGVEFKFLQNPTRIIGDEDGRVIAVEVLDYTLGEPDESGRRSPVPIEGTEHKIPVDAIIVALGNSSNPLMSRSTKQLEVNKYGNIVVDENQKTSLPAVWAGGDIVLGASTVILAMGEGRKAAASINEYLTSI
>NZ_CP042816.1|WP_002699093.1|1823978_1824812_-|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein
MHTILEKKQMSSAVFYLRVTAPGIAKNRHPGQFVLVQLDTEYGERIPLTIADANAEDGWIALVVQAVGASTIKLTQKEVGDTIAVILGPLGNPTHVSKVGTVVCVGGGIGAAPLHPIAQAYKKMGNKVIVILGARSKELVVFEDEMRKFADEVIIVTDDGSYGRKGLVTEPLKEYCEQNPPPNEVVAIGPPIMMKFCAETTRPFGIHTIVSLNTIMIDGTGMCGGCRVTVDGKTKFVCVDGPEFDAHKVDFDGMMRRMKAFKAQEERDAHECRIGIY

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Crispr_ID: NZ_CP042816_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_9

1965072-1965167

Orphan

Consensus_repeat	Method
CAGGGTTGGTTTTGCCACGGACGGCAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_9

>merge|NZ_CP042816|9|1965072-1965167|CRISPRCasFinder
CAGGGTTGGTTTTGCCACGGACGGCAAAAACTCAGAACGGGCACGGACGCCCGTGGTTCCAAGCAGACAGGGTTGGTTTTGCCACGGACGGCAAAA

>NZ_CP042816|9|9|1965072-1965167|CRISPRCasFinder
CAGGGTTGGTTTTGCCACGGACGGCAAAA	ACTCAGAACGGGCACGGACGCCCGTGGTTCCAAGCAGA
CAGGGTTGGTTTTGCCACGGACGGCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_044634207.1\|1966532_1967579_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP042816.1\|WP_024752553.1\|1961744_1962998_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|376643
NZ_CP042816.1\|WP_148879800.1\|1974190_1974406_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_044634205.1\|1969281_1970655_-\|sugar-transporter	unknown	unknown	gnl\|CDD\|273270
NZ_CP042816.1\|WP_024752545.1\|1972014_1973355_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP042816.1\|WP_044634202.1\|1978871_1980659_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223541
NZ_CP042816.1\|WP_081718735.1\|1958074_1961779_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|376628
NZ_CP042816.1\|WP_024752548.1\|1967575_1969222_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP042816.1\|WP_002696619.1\|1952687_1953038_+\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|376392
NZ_CP042816.1\|WP_024752552.1\|1962994_1963963_-\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|285027
NZ_CP042816.1\|WP_148878864.1\|1955136_1955826_+\|KH-domain-containing-protein	unknown	unknown	gnl\|CDD\|224760
NZ_CP042816.1\|WP_024752544.1\|1974862_1976515_+\|nucleoside-kinase	unknown	unknown	gnl\|CDD\|238986
NZ_CP042816.1\|WP_024752558.1\|1953310_1955140_+\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|234942
NZ_CP042816.1\|WP_024752555.1\|1957004_1958081_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NZ_CP042816.1\|WP_148879801.1\|1976668_1978132_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_002696262.1\|1965516_1966527_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270264
NZ_CP042816.1\|WP_024752559.1\|1953043_1953274_+\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|376620
NZ_CP042816.1\|WP_024752551.1\|1963998_1964793_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|179028
NZ_CP042816.1\|WP_024752546.1\|1971260_1972004_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752556.1\|1955868_1956684_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_044634207.1\|1966532_1967579_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.29401e-148
NZ_CP042816.1\|WP_024752553.1\|1961744_1962998_-\|DUF58-domain-containing-protein	gnl\|CDD\|376643	pfam01882, DUF58, Protein of unknown function DUF58. This family of prokaryotic proteins have no known function. Caldicellulosiruptor saccharolyticus PepX, a protein of unknown function in the family, has been misannotated as alpha-dextrin 6-glucanohydrolase.	1.23577e-10
NZ_CP042816.1\|WP_044634205.1\|1969281_1970655_-\|sugar-transporter	gnl\|CDD\|273270	TIGR00792, Melibiose_carrier_protein, sugar (Glycoside-Pentoside-Hexuronide) transporter. The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family (TC 2.A.2) GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.02284e-98
NZ_CP042816.1\|WP_024752545.1\|1972014_1973355_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP042816.1\|WP_044634202.1\|1978871_1980659_+\|AAA-family-ATPase	gnl\|CDD\|223541	COG0465, HflB, ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].	4.74781e-54
NZ_CP042816.1\|WP_081718735.1\|1958074_1961779_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	4.10587e-25
NZ_CP042816.1\|WP_024752548.1\|1967575_1969222_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.56196e-105
NZ_CP042816.1\|WP_002696619.1\|1952687_1953038_+\|ribonuclease-P-protein-component	gnl\|CDD\|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	2.43013e-15
NZ_CP042816.1\|WP_024752552.1\|1962994_1963963_-\|AAA-domain-containing-protein	gnl\|CDD\|285027	pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	5.92586e-73
NZ_CP042816.1\|WP_148878864.1\|1955136_1955826_+\|KH-domain-containing-protein	gnl\|CDD\|224760	COG1847, Jag, Predicted RNA-binding protein [General function prediction only].	2.18225e-64
NZ_CP042816.1\|WP_024752544.1\|1974862_1976515_+\|nucleoside-kinase	gnl\|CDD\|238986	cd02028, UMPK_like, Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK).	2.46716e-67
NZ_CP042816.1\|WP_024752558.1\|1953310_1955140_+\|membrane-protein-insertase-YidC	gnl\|CDD\|234942	PRK01318, PRK01318, membrane protein insertase; Provisional.	4.37333e-133
NZ_CP042816.1\|WP_024752555.1\|1957004_1958081_+\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	1.5897e-65
NZ_CP042816.1\|WP_002696262.1\|1965516_1966527_+\|extracellular-solute-binding-protein	gnl\|CDD\|270264	cd13546, PBP2_BitB, Substrate binding domain of a putative iron transporter BitB, a member of the type 2 periplasmic binding fold superfamily. The substrate domain of this group shows a high homology to the periplasmic component of ferric iron transporter (Fbp), but its biochemical characterization has not been performed. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.76062e-109
NZ_CP042816.1\|WP_024752559.1\|1953043_1953274_+\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|376620	pfam01809, Haemolytic, Haemolytic domain. This domain has haemolytic activity. It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.	1.35653e-40
NZ_CP042816.1\|WP_024752551.1\|1963998_1964793_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|179028	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional.	2.06248e-166

>NZ_CP042816.1|WP_024752551.1|1963998_1964793_-|glucosamine-6-phosphate-deaminase
MRVIIKPNYDGCAKWAADYICKKINVFQPTEEKPFVLGLPTGSTPLGVYKELIRLHKANEISFKNVVTFNMDEYVGLKPDHPQSYHRFMMDNFFSHIDIDLKNVHILNGLAEDLVKECADYEAAIASYGKIHLFMGGIGPDGHIAFNEPGSSLASRTRVKTLTQDTVIANSRFFNGNLNEVPKTALTVGVGTIMDSEEVMILATGHNKARALRHGIEEGVNHLWTISALQLHQHAIIVCDEPATYELKVGTVAYFTDIEKKTIG
>NZ_CP042816.1|WP_024752552.1|1962994_1963963_-|AAA-domain-containing-protein
MTTKEIADILTQALSTVIKGKKREISLFLTVYLAGGHILIEDIPGTGKTTLVKSLAALIERNGEPVQFQRIQCTPDLLPYDITGVDVFNAAEQRFEFMPGPVFADILLADELNRTPPKVQSALLQAMEEWQVSIGRETHALNPLLFIAATQNPTETLGTYPLPAAQLDRFAAKISLGYPDEAAELAILQEDPAASELPLLKPLVSESDILASRLEQKKVFIHPALEKAIVQICNKTRLHQELKLGASPRAGLQLAKNIRAYALMQGRSWAEDKDIALFAPYTLAHRCIGAERGINVFAVIAAVTGEVLSTMNKKTDWSKGAE
>NZ_CP042816.1|WP_024752553.1|1961744_1962998_-|DUF58-domain-containing-protein
MKFRISIGGGLYLGLSALLLALGMYRMELFAIISGAVLLVCLLFALINLGLSLFLWRNETPLLLQKEKQFTVIPQNKKNTFPLTLPGVACFYELVYTTDRTQIRKEKIRIQLHGGEKTIQASDFLRGKYVCESSSLCFRDLFDFFCIELHTKKESVLRPLVFPAQTAESVQTPIPFIPALESDNKNSSLRTQDMYESRPYIPGDDLRKINWKVYAHTQELAVRQGDFTPPPIQSFFVFIEEPCGRQNKKVLSAIYDECIAKVCGFLLELQKHEPDIIFLFAAKRGAIQTAKLLHTDAESQNKIQSLLAIPQVQKTPHGIQIQNLLPVLAAESILLYFYLPLESNVHPLQTLSASPVNKKIVFYPVSIKPSKTLSLYEKLLYQNKFEKQRSTLSAKIASAAEIHLAEYERKNLYAYAI
>NZ_CP042816.1|WP_081718735.1|1958074_1961779_-|tetratricopeptide-repeat-protein
MRGKTCMPMRFKILFCFRILSWLLVLLIPSLHSAAFFPFFVLPLTALFSITAASIIFGKTTLNTRAAFLLSCGLTVLFSFFILVFLALIASSFTDILYLRIRILLPVLLLVQILCGGSTIAYLKIKRWKTFEPVVLLILFACLFWNQADYQLSVFSHSFYAGVFAAAFTLLCLVPIIVEVKPFKKLFIFFTLFILLIAVSLLLILNTYNKFSVAKNGGLLQQTLFKFDFSPFLTLQDEIKISDNLLFLVHIQNEYSYAFLRRMYLGGWEKDKGFYEKAAYDEVPQTTQLPKNAEDLPHQKFGLREKVSQEYFIVNIDSRSFMAIDYPTKVIPYKIWDTLSFNSAYQVESEMLHNIPQDMFTASAPTGNSSEGLSKKDFNFYTQIDSQTAELVQPIAKEVTKNAASYNDKILLLQHFLIDGEYRYSLKPGKASDGDQLKHFLTVSKKGYCTYFAFAYCLMLRSLEIPARVAVGFFMQPESGVLNYYPVRANMAHAWVEVFFPNIGWVTFDPTSQQLAEGENLEFSFDSGGDEFNRLLSEILENRKSLTEAYSFEPSDSQSYTERIKLFIKQNRYAMLIIFAAALVLTLLLYAITPYLIIRYSKNNRKIILTADKVTKHTIAALHPLVQKAKFAPECTDEDSAAARTTVKSQKKKIGMFFFCIFSFSFFNLFAETPENLLRQAEIASNAENWDKAIELLQQGIKEYPLNTSFALRLGELYYDNQLYQPSYNVLKKALKLSKENASVLHALANSAAALNKDEEARELFLQYLDKVPADLYTWVSYGWQCFKTHKAPEGIKALEAVSKKYGEDSGIYNVLGNLYSELFNYQKAEEAYNNAIRLALKNEQRYSASVYYYNKAILESNFYLFDKAVENAKKSNEVYERASGTLMLAELEARQNNFLQALQYFIKAAAEDKTPLSYMGLAETYLRAGNIQKAESFLLQSLQKKDESWISNYGMSLSEYRAVLYSLLQKLYQMKYAKQKITLTKGFREWCGKQKNLLTYSFYAHYYQGLADVYNSRVIKEYEKNKEEDESYRLYRSGFYYKALQRFPHKALPYLIEAEKTETFFIPTAKPSYMAEKALLLKDPELINKALNVLDSQWEKELLEKLLGAACSLEKNKRKKAELAGKLFRINPAAFIHQGLKLPVRILIQFDAAGQQKISETKFTALLEKSLFTQAEDSPLQFECRYQNSVFYIAIKQNAAVFFEKEFPLQNMDKKKAIDIINSLSDSIFTSDY
>NZ_CP042816.1|WP_024752555.1|1957004_1958081_+|peptidylprolyl-isomerase
MRTNKLLLIILSIAFILIATATATAIIFTGKTTKEGSIMDETLEATLKDGLYAVMETDKGKIVLQLFYDKTPLTVCNFVGLAEGKLDAAKGKPFYDGLKFHRVIADFMIQGGDPLGNGTGGPGYKFADEFVPSLKHSGPGILSMANSGPNTNGSQFFITHVATPWLDGKHTVFGKVVEGMPVVNKIAQGDKIISIKIFRKGEAAKKFIADQEHFDTYQEAAGKMAEVHKENQKKAMIAKIKEKWPKAQQTGNGIFYLVTKEGSGATAQRGQTLTIKYKGSLLETGKVFDDSDMHEPIQFQAGSGQLIPGFDQQAAEMKKGEKRTIILPPELAYGSRGAGGVIPPDAYLVFELELLAIQ
>NZ_CP042816.1|WP_024752556.1|1955868_1956684_+|hypothetical-protein
MKYTWRFCVLFLFVMAAAFSDAALPFDDNIKGKLEKILPSPAVNALLENGELRYSAYRQKDMRATLQPMTKAAEKAARFWEGSSPAFILESLYLYKKNEPIENHESITSVLRALSKLEGLEYYSASRKKMRTLYEKSYVVDNPEDKNRIADPVDNPEKNISVFALQKDLTFGEYIYQYHFFEEEDGTGFCSENIDTLKYSIFKVIKPKQLKAAIAVHNLGDYLLVYCVTRADFLRLAGIAKKLENSLANRSDALFAWFIKHYEPKEEAAEE
>NZ_CP042816.1|WP_148878864.1|1955136_1955826_+|KH-domain-containing-protein
MTYEFEGKNERDAIDIAVAELGLEKDQFDVEIIEIQKGSLFKKGFAKIRVHVDESVQLKREDTHKTKSPAAIANTGEATEDEKEVMHFLSEIIERMGYEAKIELSGREDKRPLMRIISDNSSMLIGKKARTLDSLQFLANVYASKIKNPGFKVMLDCENYRIRREETLVRLAYNTADKVAMSKNSILLEPMNPYERRLIHTALSTINGIETKSEGNGLYKQVRVSYKGL
>NZ_CP042816.1|WP_024752558.1|1953310_1955140_+|membrane-protein-insertase-YidC
MKKNTLIAIILSTLVIIGSTYLQLKLYPPPAQEEQQLAQSEKSVQSTETVPQNTFVAKTELGSKSAGGVEFLSNPDSNDQNLTEKIYTVKTSLVEASFTNKGGDIISYKLLEHYGADSTENVEMIKNLTESNRAFSIALGNQTAPIVDQLFHVKEEKLSGGAQAIGFYKTISIRNQDASISSFILAKRYIFYPDNYMFELQVSINGDESLKGLNFNSAGYTLKTPPQIGPDWNTADKYEYRTFMSFSKEKEKTKSYTLKTDSVQEITDPVGWVSISGKYFTTIIIPQNSNTIQSTFLLAPKNAQSPIQDNQIALIRKIIAGSAITDIYHVYIGPCTENYLSPYNIPSKNPFQLDNIRIDSVAASGGLLYPLEVGLKWVLQFFYKIIPNWGVAIILVTLLIKLLFYPLTKKSFVASQRMQELQPQMQTIQAKYKNNPQKLNEEMAKFYKEAGYNPLSGCLPLLVQMPFLFAMYRLFNNYFEFRGAMFIPHWIPDLSIGDSIWKLPFTVPFFGWTDLRLLPILYVVSQIVFSKITQPPATEQQNSSMKMMLYFMPVFFFFLFYNAPSGLLVYWTAMNLMTLVQQLFIKQTMHHTSDAKNKKEVKYGKGAKK
>NZ_CP042816.1|WP_024752559.1|1953043_1953274_+|membrane-protein-insertion-efficiency-factor-YidD
MKIIKKILSIICIGVIKFYQKAISPLFPPTCRYYPTCSAYALESIKKYGPFKGVFLAIKRILRCHPFHKGGYDPVP
>NZ_CP042816.1|WP_002696619.1|1952687_1953038_+|ribonuclease-P-protein-component
MERSFFSKRERLCGAQNVKSVFKQGNKYYCNGAKLFVLPNKLEYNRFLCTFPRGYGNAVQRNAARRLSKEVYRQMKKELNQGFDLILLLFPGNNTFAARTGQLKVLFNKAGLFSIN
>NZ_CP042816.1|WP_002696262.1|1965516_1966527_+|extracellular-solute-binding-protein
MRKIIGIICAVLLACAVFGCAKGEGQTEDILVVYSPNSETLVKATIPAFEAKYNVKVELIQAGTGQLLKRLQTEKADPYADLLWGGSYSSIRDNKDLFQDYVSANNENVLPAYQNTTGFITPYTLDGSCLLINTNLVKAPITGYADLLNPEYKGKISSADPSNSSSAFAQLTNILLAMGGYEDAKAWEFVKDLYRNVDGKIKGSSSGVYKAVADGEMSIGLTYEDPSVSLEQSGAPVKIIFPSEGSVFLPAGSAIVKDAKHLSLAQKFIDFIISEECQNNFAETTSNRPVIKNGKTPKGMKEFSQIHVIDEDMDYVYTHKKELVEKYKKIFVELSN
>NZ_CP042816.1|WP_044634207.1|1966532_1967579_+|ABC-transporter-ATP-binding-protein
MSKILIKDAVKKYGETVVIQNLSVEIPDGSLFTLLGPSGCGKTTLLRMIAGFNSIEGGSFFFDDVLINDLDPSKRNIGMVFQNYAIFPHLSVEDNVKFGLKQRNLSKEEIQRRADYFLSLMQIEQYRTRMPAQLSGGQQQRVALARALAIHPSVLLMDEPLSNLDAKLRIDMRSVIRRIQREIGITTVYVTHDQEEAMAISDYIAIMKDGKIQHLGTAREIYHRPKNVFVAGFIGRNNIIKTMIKDKHVLLNAVPVMPLPLADQEVQLSIRPEDFSFADEGVPAKILDSTFLGSETHYRVSLNDEIEIDIVEESGVSEIPVGSSVHLKIKTEKINVFNADGSINLLYT
>NZ_CP042816.1|WP_024752548.1|1967575_1969222_+|iron-ABC-transporter-permease
MKKKKFDSWTIITLVIAFGYALFLLYPLCVLLFKAVFDKSSGSFTLAYFKKFFSQAFYYRTLSNSFVISTVATVLSLLIGVPLAYFFTAYRIRGKKILRVFIILSSMSAPFIGAYSWILLLGRNGVITRLLHSAFGLTGMTIYGFNGILLVFVLQLFSLIFLYVEGALATVDNSLLEASESLGVKGVKRFITVLVPLILPTILAGALLVFMRAFADFGTPMLIGEGYRTFPVLIFDEFINELGGSDEFASAIAVLAILITTIVFLLQKYVAKKNAVSMSSLHPIHEQPLHGIKKILIYVFSYGIVALAIAPQLYVLYTSFLKTKGMVFQKGYSFISYTTAFSKLGTSIQNTIIIPGISLAIIISLAVFIAYITVRKKNLLSSSIDIVSMIPYIIPGTVVGIALLGAFNRRPFLLTGSFTIMIIALIIRRLPYTIRSSVATIQQIPQSIEEAALSLGSSKLNTFFKITVPMMKSGIISGAILSWITMITELSTAIILYTAKTQTLTVAVYTEVIRGNYGVAAALSAILTLVTIFSLLLFMRVSKKQVSV
>NZ_CP042816.1|WP_044634205.1|1969281_1970655_-|sugar-transporter
MRNEDLSTRAYAFGTFGRDMVFALVSMYLLYYLTDVVNITKETLAWVSLIMVSCRIFDALNDPIMGVIVDNTETGYGKFKPWILGGMIFSALFTVLLFTDFGLQGKKFLLSFAVLYLCWGLSYTAHDISYWSMLPALTQDQKKRGKIGSFAKICATLGLFSVVISIIPITNYLAERFSSKTQAFHIYAFAVVLCMLLCLTPTLLFTVEDKTIQKTKPSTPLNELFSVIVKNDQLLWITISMVLFTIGYTTTSSFGIYYCKYLYGNENAYSLFALVLGISQIASLAAFPILSKKHKRSGIYQLAIVLVICGYFLMYFSEFLLILIAIAGCFIFFGSGLIQILMLMFIADTVEYGQLKLGRRNNSITLSLQPLIYKTGGAVASGIVGVTLIFCGIQEQGFEIMSPAQITLFKIAMLVFPLSCIIFGYFIYTKKYIIDEKKYAEILANLNEDNSDTAPSK
>NZ_CP042816.1|WP_024752546.1|1971260_1972004_-|hypothetical-protein
MKKPAVLIYSVFFLSALFSETPFTEIWYKNDGLQNCSVSFIRKKDRIAFVFQYTVDGEFYWDSGTITGQTDSEAEGVFFQQNKNITETCKAIFTLDSTDLHIRINGTPPTAGAQFSYAGRYCRDKSRLRVISDNSIFFKTEKQRHAFQSLCGSEQDFILKYMKYYLPIPSKDHFITRAYEIFSSLEQKKPPMLLAFSDDFVYFIFYDPRPRPYPEIRFFLNAPRYKMLPSTFYHYVTIHDDAVFVRH
>NZ_CP042816.1|WP_024752545.1|1972014_1973355_-|signal-recognition-particle-protein
MLEKITDTFSGIIRKIGGKATITEKNIEDAVEEIKTALLDADVNLRVVRRFINATIEEAKGETVLKSVNPGQQFVKIVHDKILSFLGDDKQDLQLKGPDTQSVILFLGLQGSGKTTSAAKLAARLKKEGRKPLLVACDLVRPAAIEQLSVLGTQIEVPVYKEESKNAVQVAKNGLAFAKKNFYDTVIVDTAGRLQIDAEMMNEIIAIKKAINPVETLLVADSMTGQSAVDIAKEFDGSVGLSGVILTKFDSDTRGGAALSLKTITGKPILFIGTGEKIEDLEPFYPERIASRILGMGDIVSLVEKAQETIDAEEAMRLQKKMANESFTLSDMLTQLESFEKMGSIESMLDMLPGLTGKISQEDIDKAGLKKQKAIIQSMTIKERENFRIIGPSRRKRIARGSGTSVGEVNKLLKQFEKTRQTMRKVAKNKGLQSKLMGGGMGNFFG
>NZ_CP042816.1|WP_148879800.1|1974190_1974406_+|hypothetical-protein
MVLNRNDVLKQNYLQSFKTRRFGFDKDVKTKPLCLTLFFIKIFMIFVRFIKEYDRAIKKTLYQLNLIIQAF
>NZ_CP042816.1|WP_024752544.1|1974862_1976515_+|nucleoside-kinase
MSEFTIRFPNEQKKRFVQPISAGALLAYMPNIDKTVYGMKVNNELVALSKTIDIRASVEPVLKGTQEGSKIYRRTLCLLLAAASQALYPEPRLLVGHSLGYSYYYTLEGNNTEKIDFKKIEEKMRELVEADIPIQTRWLSYEEAIEMFQNSNQPDTYKLLSYISKPKILINKLGDFHDLFFQPVMDRTGEVKVFELMPYGEGFLLRFPSTAEPDKLPVFDDIPQLFTVYKEYKQWGKLVGVSAVGQLNTIIEKRKTKDYVEIIETMQNNKLAKIAGQIEEKKTVKLVLIAGPSSSGKTTTAKKLSMQLRVLGFDPHIISLDDFYLGSAKTPIGEDGKPDYECLEAIDVPLINEILLKLFNGEMVELPSYNFKTGEREYRGKTLQCNERSIVIMEGIHGLNDKTTAEIDPNLKFKIYLSALTQLNLDDHNRIPTSDNRLLRRIVRDAQFRSTAASKTIEMWENVRSGEAKYIFPYQGNADAMFNTALDYELSVLKIYAEPLLRTVKPTDPSYSEASRLLMFLNNFLSISPSFVPGQSILREFIGDSDFSYR
>NZ_CP042816.1|WP_148879801.1|1976668_1978132_+|hypothetical-protein
MKLKHVSFACCILLLMPIFSEETEEALGKKYNIEIRVQPEFVGPDNKQPLFSFDRIPDSSLIRKVIAKTWFFAAPQDVLSLSEKTYTDINGNTFTVKAQALPEKKQIAVMVIPEINEYSATGKNMLPQGTWILYRNDASGEPVQIKILPRENPNLYILLHPAKAVEQKGKSFIDICLYNAYVRKDMPLGVSFNDLLYFSLINIRSISKDVLPWELFNPPGSYSAIESMTKIIKQKSYGLVPLPNGCFDESGRPVHISDGTPQKDVEIIRNLRIDQIPKEVIGGVDTLGFAKWVIDGIIYPVAGQGIYVSSLKKATSIPDTHFNKADQKDRKAFLSIDWIRNLASAAFSLDVKRTVYPDKSGVDVKIEPFALTFSVPMNDKSSPPFVGYLKDTGYQIEYLHALLYYLAATEPGHFYLGVINEEKTAPKMRHYKQVLVFFPYFDTYGHFRIETFQQISEFRIEDVIKDNQKDYISLVRVRAPEIGLFNP
>NZ_CP042816.1|WP_044634202.1|1978871_1980659_+|AAA-family-ATPase
MHSGQELLAKNSHVINELHAWAQELSKKYCSKTVNLYIVHGNIRDFLPHRDIAGGFAFVRIRDYISEVIFGNKDIIIFYDKSSGINFCLNSMLQEYLTIMHRKYPDVPIENLLSKDPVEAFSYLEQYFRMNMRQGKRIVLIVDYAESLTPAEDIAYLNETDRYCLVTLNRWSHDPVFTNEDISIVLLTENIADLNTRITASPSTVKIHIPLPDEAIRIDFLNDLKNREDLLILERGLNTEKLGKLTAGLNLVNLNQLAAETYQMSDDDGKIRGSTQSDPVTLEFLKQKKQEIIETEAAGMLQFVNTDHNLSYIAGNSFVKKRFVNAAKAIRQGRADVLPMGYLITGPIGTGKTFMVSAFAGEIGIPMVRLCNFHSMQQRTAEANLEKVLNILKAMAPVAVMVDEADAVFNAKRDSTGGESRIFAQISSFMGNTDYRGKIIWFLITSRPDLLPIDLKRQGRAEEHLAVFYPETAEEKIELLETLQRKLKIRLKDVNPAGIIKKLKFPVSGADLEAILVRSKLNAAMENRMMIVNADIEQTIEDFIPPSYPYEIELQNLVAVLECTSKEMIPKKYQNFDRSKLAAEILELKQLLGEK

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Crispr_ID: NZ_CP042816_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_10

2109706-2109840

Orphan

Consensus_repeat	Method
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_10

>merge|NZ_CP042816|10|2109706-2109840|CRISPRCasFinder
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCCCTGCTCAATTCCAAACGATGTTTTGCCTGTACTCCAGCGTAAACAGGCAAAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC

>NZ_CP042816|10|10|2109706-2109840|CRISPRCasFinder
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC	CTGCTCAATTCCAAACGATGTTTTGCCTGTACTCCAGCGTAAACAGGCA
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_148878823.1\|2115128_2115950_+\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|227591
NZ_CP042816.1\|WP_024752439.1\|2119356_2119668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879820.1\|2114071_2115100_+\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|227591
NZ_CP042816.1\|WP_024752447.1\|2105850_2109405_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP042816.1\|WP_002698959.1\|2102312_2102729_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879821.1\|2115958_2116147_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879822.1\|2116396_2117605_+\|ZinT/AdcA-family-metal-binding-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148878828.1\|2098939_2099911_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NZ_CP042816.1\|WP_044634998.1\|2104549_2105518_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|223301
NZ_CP042816.1\|WP_024752445.1\|2110660_2113486_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP042816.1\|WP_002698955.1\|2103740_2103950_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP042816.1\|WP_039915057.1\|2110036_2110276_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP042816.1\|WP_024752454.1\|2096537_2098943_-\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_CP042816.1\|WP_148879417.1\|2101192_2101720_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|372644
NZ_CP042816.1\|WP_024752449.1\|2104046_2104550_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP042816.1\|WP_148879823.1\|2117722_2118922_+\|ZinT/AdcA-family-metal-binding-protein	unknown	unknown	gnl\|CDD\|370371
NZ_CP042816.1\|WP_002698960.1\|2101716_2102310_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP042816.1\|WP_002698949.1\|2110433_2110664_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP042816.1\|WP_024752452.1\|2099892_2100696_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP042816.1\|WP_024752444.1\|2113538_2114075_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_148878823.1\|2115128_2115950_+\|DUF4198-domain-containing-protein	gnl\|CDD\|227591	COG5266, CbiK, ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism].	2.19476e-50
NZ_CP042816.1\|WP_148879820.1\|2114071_2115100_+\|DUF4198-domain-containing-protein	gnl\|CDD\|227591	COG5266, CbiK, ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism].	4.95849e-47
NZ_CP042816.1\|WP_024752447.1\|2105850_2109405_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP042816.1\|WP_148878828.1\|2098939_2099911_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	8.19321e-95
NZ_CP042816.1\|WP_044634998.1\|2104549_2105518_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|223301	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].	1.58975e-120
NZ_CP042816.1\|WP_024752445.1\|2110660_2113486_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	9.97374e-141
NZ_CP042816.1\|WP_002698955.1\|2103740_2103950_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.08952e-13
NZ_CP042816.1\|WP_039915057.1\|2110036_2110276_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	7.30117e-12
NZ_CP042816.1\|WP_024752454.1\|2096537_2098943_-\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP042816.1\|WP_148879417.1\|2101192_2101720_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|372644	pfam13599, Pentapeptide_4, Pentapeptide repeats (9 copies).	2.96177e-08
NZ_CP042816.1\|WP_024752449.1\|2104046_2104550_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	7.9898e-71
NZ_CP042816.1\|WP_148879823.1\|2117722_2118922_+\|ZinT/AdcA-family-metal-binding-protein	gnl\|CDD\|370371	pfam09223, ZinT, ZinT (YodA) periplasmic lipocalin-like zinc-recruitment. ZinT plays a critical role in recruiting periplasmic zinc to the bacterial zinc-uptake complex ZnuABC, consisting of families pfam01297,pfam00950, pfam00005, regulated by the transcription-regulator FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), pfam01297. Members of this family of prokaryotic domains were first identified as part of the response of bacteria to a challenge with the toxic heavy metal cadmium. They are able to bind to cadmium, and ensure its subsequent elimination.	3.63479e-08
NZ_CP042816.1\|WP_002698960.1\|2101716_2102310_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	6.7097e-21
NZ_CP042816.1\|WP_002698949.1\|2110433_2110664_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	6.54277e-19
NZ_CP042816.1\|WP_024752452.1\|2099892_2100696_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	3.69613e-72

>NZ_CP042816.1|WP_024752447.1|2105850_2109405_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MSEKNLVMIDGNTAAGYVAHALSEVIAIYPITPSSPMGELADEYSAQGRKNIWGTVPSVVELQSEGGASGAVHGALTTGALSSTFTASQGLLLMIPNMYKIAGELTSTVFHVAARALATSALSIFGDHQDVMSCRQTGWAMLASNSVQEVMDSAVIAHAATLEARVPFLHFFDGFRTSHEIQKVEEVSYEVMQKMVNNTLVREHRTRGLTPEKPMIRGTAQNPDVYFQSREVVNKYYQATPAIVQKTMDKFAELTGRQYHLFDYYGAPDAEKVIILMGSGADTVEETVDALNEKGEKCGLVKVRLYRPFDASAFVKALPSTVTAIAVLDRTKEPGALGEPLYEDVRTAIGEMQFKKECPFTHYPLILGGRYGLGSKEFTPAMVKGVFDNLSGKKIANFSVGITDDVTHTSLDYDPSFHLDDKDMHQAMFYGLGADGTVGANKNSIKIIGEATDNNAQAYFAYDSKKSGGFTISHLRFGKNKIRKPYLITQSDFMACHKFTYLETFDMLKTLKKGGTFLLNAPYGKDEIWQKIPVEVQKQIIEKEAKFYVIDAMSIAEKAGMGTRINVIMQTAFFKIFGILPEDEAVGLIKKFTEKTYGKKGAEIVQKNITTIDMALAGLEKVEYPKTADSKVTRHSAMTADAPEFVQNVLGEMALNKGDELKVSQLPVDGTFPTGTTQYEKRSIAEHVPIWDSEVCIQCGQCVMVCPHAVIRMKAYDKKELDKAPKEFKSCAYKGKEFENAAFTIQVSPEDCTGCALCVEQCPAKNKADPTRKAINMESFVEHREVESKNWKFFVNLPDPDARKLNLSVPKGVSMKRPLFEFSGACPGCGETPYIRLMSQIAGDRAIIANATGCSSIYGGNLPTTPYAKRADGRGPAWSNSLFEDAAEFGYGMRLTSDKLAEYAREVAGQLKDKNIAADVIAKILANTQEEDSAVEDQRAFVADLRKELEKSSDPLAKEMLSLTDHLVRRSVWIFGGDGWAYDIGYGGLDHVLASGKNIKVLVLDTEVYSNTGGQMSKATPIGAVAKFAAAGKTTSKKDLGMMAMSYGYVYVARIAMGANMSQTIKAFREAESYDGPAIIIAYSHCISHGINMTKGMSHQKEAVSSGLWPLYRYDPRLVAAGKNPFQLDSKEPDFKLADFMYKEVRFKTLKNANPERAEMLLKAAEEKTRRQWQEYKYLADRPF
>NZ_CP042816.1|WP_044634998.1|2104549_2105518_+|methionyl-tRNA-formyltransferase
MLKILFAGTPECAVPVLHAIAQKHHIVGILTRPPAAVGRSKKLIPSAVALATEVLKSEKRISPAAPLFTPEKLNKDVREAIAAVSPDVMVCFAYGKIFGQSMLDLFPLGAINIHPSLLPRWRGSTPVPAAILAGDTKTGVTVQQMALEMDAGDILAQCTIPLDGSETAESLLNLCAQKSADLTLSVLQKITDKTLSPMPQDHSAATFCGMLTKEMGLINWHNSAEEIDRRHRAFVPWPGTFTYKNNEKLSIQALAIAASENTQNAEPGTILTADKKNGILVQTGRGIISLIQLQRTGKKSLYWKDFLNGSAEFLTGKFNTSL
>NZ_CP042816.1|WP_024752449.1|2104046_2104550_+|peptide-deformylase
MEILYLGEESLRQKSIPVENITEEIKDLVQKMFVTMKIKDGIGLAAPQIGKNIRLFVTGVNNEQRVFINPQIIETSEKVCSYEEGCLSIPQIYEKVVRPETVTVQYQNIDGRRKTLQATGLLARVIQHENDHLDGVLFIDRIDEKLREEAIKLFEKKKKPIKKKAAV
>NZ_CP042816.1|WP_002698955.1|2103740_2103950_+|30S-ribosomal-protein-S21
MAYITVDDSENLEKAIKRFKRQVEKEGIIREWKKREYYEKPSTILNRKKKALQRKLMKKNRKTYDSKAY
>NZ_CP042816.1|WP_002698959.1|2102312_2102729_+|hypothetical-protein
MNTECFYAIVLPGNLLSVLYEEQRLFQTLIESQFRKMPPFLKYEKRYDQSVLKISAPELRDGYLIRQCSMQGEKLSECFVLGFGGVHAEKLIKTMPELKAQSKVQNIFLPLQCSNWRLAKVELTHYGTYGICWKLREL
>NZ_CP042816.1|WP_002698960.1|2101716_2102310_+|MBL-fold-metallo-hydrolase
MKIYFHYSIGSFTNSYLVGNEKTSEAIMVDPGRITTEIIHNIEKNNFSLRAVFITHCHATYYDHGLQTIMNVYQPEVFAADTEVDTIKTSVLRGDGLIERAGFTIEYFSVPGYSPDSYMFKIQNVLFTGDSLSAGMIGETANIYAGKNLLKNLHTKILCQDENIILFHGHGPPSSLKSELLYNDELHYPYVSLQPQG
>NZ_CP042816.1|WP_148879417.1|2101192_2101720_+|pentapeptide-repeat-containing-protein
MFSASCVLTKDVFLKEYGAEKNINSVNVSDQVFENIDFSEKILTGTCFSNSVFKNCIFDGIRMRMSFFEFCQFQNSSFKNSDIQFSSFSGSSFEKVSFKNSVLLHNNFNGIRADETVFDDSDLYNSRFIAAKLKLTGFNNCNIRKTRFFKNTYDAVSFKSSNTREAFFGKGENPE
>NZ_CP042816.1|WP_024752452.1|2099892_2100696_-|glutamate-racemase
MTKKNEQYQYAFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASETVEKLIARFNPEIIIVACNTMSVMALDSLRKKFTLPFVGTVPGIKLAVKQSRNKRIGILATERTVCDPYTERLIEEFGSGCYFEKRADQELIAQIEDGLITDSYEEKLKAIQPALEQFKKANTDSIILACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRIAPCKKNPDAPPNSCYATAALDTHIEEQYRMYSKLFQLRWGGAL
>NZ_CP042816.1|WP_148878828.1|2098939_2099911_-|ribosome-small-subunit-dependent-GTPase-A
MGGGSLIRGKVLCGANNFFDVSCEDGTVRYCSIRGKKLEDPVGYYNPLAPGDFVLVDEDTHDKEKGQIVSLEKRKNHFVRWNQKTDKPQILACNIDLLVCVTSPANPPFRPRFIDRVLVQAEAEQIPVLIVINKTDLDTTDEVRLRINDWERIGYETLKLSALNNTGVERFAKRIEGLTVAIIGQSGVGKSTLLNSLDPTLNLRTAEISSKYDRGIHTTTQGILLKATHRFRDGTESKTEVIDTPGIRHFAIWGMKPDELALYFPEMQKLLGTCTFGLSCSHTHEEGCAILHALENGGIHPDRYESWRLISEELEALTAEDYS
>NZ_CP042816.1|WP_024752454.1|2096537_2098943_-|endonuclease-MutS2
MTEHTLEVLEFNKICAAIAAYCVTEEGRAACLQKKPLTDKEKITAEKKLGSDFLSLLQTGAEPPVKKRPPLIEFLQSLGKEGSALSIEGIYSIGISAKHCNELHAWADAFEKANANKTPQQDVLQFIRTFPNLLEVYKAVFSFIDEDGDLKDIPELRSIKNKIAAIESDIEKTMRSYFTDEHTRDLLQTNIPVLRNGRQVLSVRSNFKGRIKGIIHEYSQSGQSFYLEPEEIVFKNNELLSAHAEYDRELQRLLKELTAKIAAYAPALEELSEKLIALDCVSASAKWAKNFHCVFAAQPQKDTAAFFLHQARHPLLGKTAVPIDLKLVANDRLLIITGPNTGGKTVSLKTAALFALMNQTGWPVPAGAQTCLPYFNFIACDIGDEQSLEQSLSTFSAHMQNIAEILRSADKESLIILDELASGTDPLEGGAIAMAVLDELAKRDALVFVTTHHGSLKNYGYTKQNCVNASVEFNESTLSPTYKIIMGVPGESHAIDIAERNGMPQHIIAQARAYIQDNRADVSALIQSLVQKHADLNKFEEEKQIEQQALRSDRRRIDLKELQLKQKELELRKQGYKRLDNLFSDKRRELENLIREIKEGELTSEKTKKVKQWFDNFESELAEEKTGMREENAELTALIKKRSDKNKHQTPQTPFTEGMTVYVSSFRRKGTLIRKEKKDTWLVSFDTVKMVVFENDLQPLESEQQKKQPVQIITEISSDKRPQFELRLLGLRIEAAEKALQDQLDLSAMHGIKEFAVIHGKGSGILQTMVHEKLKQTTFVQNFYFARPEDGGTGKTIVHLE
>NZ_CP042816.1|WP_039915057.1|2110036_2110276_+|ferrous-iron-transport-protein-A
MEFTLIPLIVLKTGEKASVLKFDGTGAEFTRLRSLGIDVNTELTVVTSQADKKGPMLLLVNGAKYAIDYNLASKIFVLI
>NZ_CP042816.1|WP_002698949.1|2110433_2110664_+|ferrous-iron-transport-protein-A
MTLDELEQGKNAVIENLEITGSTLQRLISLGFTPGAEVSVVRKAPFLDPFDISICGSLVAVRRDEAKRIIIRELAE
>NZ_CP042816.1|WP_024752445.1|2110660_2113486_+|ferrous-iron-transport-protein-B
MKQDQIHIAFAGQPNSGKSTLFNMMTGARQHVANYPGITVEKKTGNYQAFGQSVLITDLPGTYSLTSYSPEERVSRNFILFEKPNLLVNITDASNLERHLYLTFQLLEMQCPVIMYLNKTDIATYQGLKIDIDKLSQTLGIPIIAGSAKRKEHAQELKQCIAETTGHTQNPYMLSYGKDMEACLAAIVERLQKAQKNAEDAVPLRWLAIKLCENDSAVRNEQKEKFEEFDSILQYISELEAQHKEKHKHSFEIEIALARAGAAKKIIADCVTKVAADKKTVERVRLKRRIFEGLSALTLFFVTFQILDAVLVMFPGVFQHNSVRLCINLLLSGIFTGGAAFIYVKGGENAVNATDRVDKVLCHRVFGILILVELVLVFYWITVILGYKMTDKVFPVFKFFRSIVSQLIPAQGLISEGLLRGLFLNGIIDGAIMILNYVPIFFCLFALIAFLEDVGYMARLAFIMDRILRKFGLHGQSTLPMILSGVIMGGCVVPGVMSTRTIRDNKSRLVTILILPLLNCMAKIPFYVLITGIFFVRYQWLVLGGISFITLLVALIVAKYFSLYVVQGTPEPFVLELPAYSLPTVRGVLTRTFERLWSFIKKVATTVVAVSVVIWAGVSFPAMGEKEQAVFNTEKDTYIHNFVRSLNNSYAPYFASEKGFLDYQNLTERMYLLETLTSFGGEKAVARSMNRLFLENPEMTKIALRGKLELGDTIHAFKDYFTRYAAAEKDFINAYAQTPDFQKPIMKSAFYGYWQRMNPFFFAIVRTGSISISGTSVVDRDAAAMTRSLRTAFADLKLISVHYHRETLEHSALGYLGKGMEPVTKYAGFDWKINIAILGSFAAKEALVSTLGTIYSVESASEDSGKLLEARIQDKETGMTPLDGLTIMILIALFPPCIATMIATKTETQSIGWTAFSVIYPVVLSSLVAVFVFQFGRLLGF
>NZ_CP042816.1|WP_024752444.1|2113538_2114075_+|hypothetical-protein
MKKIYLLLVLIISAPVLFAHTPLLTVEDNGDGTIYVQGGFSNGASAAGVKLYLTDKNTGEKLWDGEFPAVGEINLEIPAVPYTVTFDAGPGHVVVKDGPLYERGADDAPAQKDATENGGTVTAGSVAAPSASWVPMDTVSAMPSVGPSFTAIAALCLAILNLVLILFLFRKIKNRSSL
>NZ_CP042816.1|WP_148879820.1|2114071_2115100_+|DUF4198-domain-containing-protein
MKKLVLTAFLFTSAFFLFAHFQMIYTPSSIIEQNAKSADFILTFTHPFESGLTMDIGKNEQGEIKGLKEFYSIHKGKKLDLLSMIKESEFTSAENKASAYTFTLDKDSGFRGGGDWVLVAVPHPYYEASEEGYIQQITKVFINKAGLATDWQTACVKGYPEILPLVKPYDIWKGSIFRAVVLDSNGKPVPFAEIEFAHINYDVDMQAKAFTGKAKLEQAGGGIILADATGVFEFIPPCAGYWGFSALGVGKEKEFSGKALSQDAVIWIEINKDETEPAPASNENEEKTAASEETSASEKDREPRKDDFSPAALIIVILLFAVMFAWPPIFKKMSEKSEKKDS
>NZ_CP042816.1|WP_148878823.1|2115128_2115950_+|DUF4198-domain-containing-protein
MMKKNIGILLLLCAIGATVFAHHQMIYTPASIIESNEVNFKITFTHPFVSGHTMDIGKNEQGEIKGFEKFFSVHKGKIQDLLPSLKKTSFSSAENSALAFDLVLDKTNGFRGGGDWALIGVPYPYFEEAEDGYIQQITKVFINKAGLATDWKNRCAEGYPEILPLVKPYDVWVGGVFRGVVVDANGKPAPNIEIEIAYINYDVNMEKSAFEKTPKTSRGDAIILTDSNGAFSFVPTESGYWGFSALGAGNKKEFSGKALSQDAVLWIEASLPK
>NZ_CP042816.1|WP_148879821.1|2115958_2116147_+|hypothetical-protein
MVEKIIIGVAVLAIILLFVRKYYRIFTGKASACSCGEKNDMKNGCGCCCSACHDTKEKREEV
>NZ_CP042816.1|WP_148879822.1|2116396_2117605_+|ZinT/AdcA-family-metal-binding-protein
MVKKIIGIKRMSFFIFITVFFIACQSAPKSKTETIAAGNEMAAWKGEWVSLDTIKTDAALEDSYTEAAKNMAHYTVEGFKAAVADMYQTPVLKMKFDGTNTVILTVQNNKEAIVEVPCEYVYKGKVAVLGEKNRFWYTFQAAKDIRELKNAKYLIALPPEQDDSGILHWHARISSHDINWLVNGKKTWPTYVAESTPQEKKIQNLKESIRTLPARLPEKPFEQYADNGKWINRPAVFDNTSKEVSAAYEKIIKEFAGKNPKGGDFTKEEIIAEIKKNDKTLNTLDDFTHLSFLTEGKKNELIIYKGEKIVFQSEYKRVAQSTSRPYITMRAEKKDAGKFSLISFVVVHGAPMYHFHLWYGRNETDLENQEGVPTCFSTTKISNETLANYIEKTCRRTLTAEN
>NZ_CP042816.1|WP_148879823.1|2117722_2118922_+|ZinT/AdcA-family-metal-binding-protein
MSKKRIGTLLVPVFMALAVFFTACQSAPDAESGATPKTGELAGWKGEWISFGDTKDDPSLEAAYKETAEKMPNYTVEGFKAAFAAMYKTPVVKAKFDGSNKVKFTVRDADGKEEEIACEYKYIGKIPVPGYEGSSWEAFEAVKDVRGLSQAKYMVLFPPHSHDGGMLHWHARFGARSAEAIAKDTSFWWPTFVSASMSKEDLLKEAKEGIKAMGSMFDKSPFESYAAQGRWMNSSLIYDNTSKEVSNAFDKIIKEFAGKNPKGGDFSKADIIAEMKKAYGTTDDFSHIEFVTKKGKNELVLYKDGKEVYKAAYKRVADNPSKPGMLAVATDKGGKFKTISLTGAHGTPMHFHLWYGASDIDLTQFTTKPTCIPENTSNADIAARVEKSCRSVLNSILMK
>NZ_CP042816.1|WP_024752439.1|2119356_2119668_+|hypothetical-protein
MKKRNVILICLLAFGAAFLIAHTPLLLCYDNGDGTITCEGGFSDGSSAKGVEIRVVDNKNKVLIKGKLDKNSEFTFKRPKGNFSVIFDAGPGHVVKVKSEDIE

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Crispr_ID: NZ_CP042816_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_11

2269200-2269348

Orphan

Consensus_repeat	Method
AGCGACGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_11

>merge|NZ_CP042816|11|2269200-2269348|CRISPRCasFinder
AGCGACGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAGCACTGATTTAATCAAGAATACTAAAAATCAGGGCGTGGCGGTGGTTCCACGCAGAAGCGATGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG

>NZ_CP042816|11|11|2269200-2269348|CRISPRCasFinder
AGCGACGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG	CACTGATTTAATCAAGAATACTAAAAATCAGGGCGTGGCGGTGGTTCCACGCAGA
AGCGATGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_039943365.1\|2280630_2281923_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181512
NZ_CP042816.1\|WP_148879027.1\|2271859_2272144_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_002699726.1\|2261632_2262106_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|238374
NZ_CP042816.1\|WP_002701542.1\|2270152_2270614_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235846
NZ_CP042816.1\|WP_148879431.1\|2260606_2261587_-\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223476
NZ_CP042816.1\|WP_024752013.1\|2259721_2260594_-\|NAD(+)/NADH-kinase	unknown	unknown	gnl\|CDD\|223139
NZ_CP042816.1\|WP_002701550.1\|2268227_2268755_+\|dentilisin-complex-subunit-PrcB	unknown	unknown	gnl\|CDD\|379569
NZ_CP042816.1\|WP_148879025.1\|2262367_2262550_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879026.1\|2271024_2271684_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP042816.1\|WP_148879838.1\|2276213_2277932_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|273349
NZ_CP042816.1\|WP_024752012.1\|2257443_2259132_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_CP042816.1\|WP_148879837.1\|2272474_2272957_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|234860
NZ_CP042816.1\|WP_002701529.1\|2272953_2274147_-\|DUF1343-domain-containing-protein	unknown	unknown	gnl\|CDD\|377768
NZ_CP042816.1\|WP_044634284.1\|2256585_2257386_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_148879836.1\|2264296_2265550_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256
NZ_CP042816.1\|WP_148879977.1\|2265817_2267854_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP042816.1\|WP_024752020.1\|2279128_2279836_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP042816.1\|WP_024752010.1\|2255388_2256585_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|372434
NZ_CP042816.1\|WP_024752018.1\|2274143_2276105_-\|penicillin-binding-protein-PBP4B	unknown	unknown	gnl\|CDD\|179620
NZ_CP042816.1\|WP_002701539.1\|2270663_2271032_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_039943365.1\|2280630_2281923_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181512	PRK08637, PRK08637, hypothetical protein; Provisional.	7.42202e-161
NZ_CP042816.1\|WP_002699726.1\|2261632_2262106_-\|chemotaxis-protein-CheW	gnl\|CDD\|238374	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea. CheW interacts with the histidine kinase CheA, most likely with the related regulatory domain of CheA. CheW is proposed to form signalling arrays together with CheA and the methyl-accepting chemotaxis proteins (MCPs), which are involved in response modulation.	5.67371e-47
NZ_CP042816.1\|WP_002701542.1\|2270152_2270614_+\|hypothetical-protein	gnl\|CDD\|235846	PRK06654, fliL, flagellar basal body-associated protein FliL; Reviewed.	5.18759e-12
NZ_CP042816.1\|WP_148879431.1\|2260606_2261587_-\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	gnl\|CDD\|223476	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].	1.15559e-44
NZ_CP042816.1\|WP_024752013.1\|2259721_2260594_-\|NAD(+)/NADH-kinase	gnl\|CDD\|223139	COG0061, nadF, NAD kinase [Coenzyme metabolism].	1.40201e-75
NZ_CP042816.1\|WP_002701550.1\|2268227_2268755_+\|dentilisin-complex-subunit-PrcB	gnl\|CDD\|379569	pfam14343, PrcB_C, PrcB C-terminal. This domain is found at the C-terminus of Treponema denticola PrcB. PrcB interacts with the PrtP protease (dentilisin) and is required for the stability of the protease complex.	1.83249e-13
NZ_CP042816.1\|WP_148879977.1\|2265817_2267854_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	8.2065e-52
NZ_CP042816.1\|WP_148879838.1\|2276213_2277932_+\|potassium-transporter	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	4.93549e-93
NZ_CP042816.1\|WP_024752012.1\|2257443_2259132_-\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0
NZ_CP042816.1\|WP_148879837.1\|2272474_2272957_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	2.49008e-56
NZ_CP042816.1\|WP_002701529.1\|2272953_2274147_-\|DUF1343-domain-containing-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	0
NZ_CP042816.1\|WP_148879836.1\|2264296_2265550_-\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	2.71116e-09
NZ_CP042816.1\|WP_148879026.1\|2271024_2271684_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	1.4682e-42
NZ_CP042816.1\|WP_024752020.1\|2279128_2279836_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	6.28896e-40
NZ_CP042816.1\|WP_024752010.1\|2255388_2256585_-\|HD-domain-containing-protein	gnl\|CDD\|372434	pfam13023, HD_3, HD domain. HD domains are metal dependent phosphohydrolases.	1.64558e-21
NZ_CP042816.1\|WP_024752018.1\|2274143_2276105_-\|penicillin-binding-protein-PBP4B	gnl\|CDD\|179620	PRK03642, PRK03642, putative periplasmic esterase; Provisional.	4.55054e-133

>NZ_CP042816.1|WP_002701550.1|2268227_2268755_+|dentilisin-complex-subunit-PrcB
MIKKHAVLFVGFVLISGISLYSYEENLLDLDAQSSATQKNEHFDAAYTILDSGVYSTVRYPKTVVIRNKKTWDKFLKNYNSRLNMAAPDFSKHAVIAVFAGEFSTGGYNLFVESIEKDDDDNELEISFKLSYPSPNETVTQAFTYPFIVVAVEISPHVKIDVDLPDTLEEKMKKF
>NZ_CP042816.1|WP_148879977.1|2265817_2267854_+|HAMP-domain-containing-protein
MVLPLSFFLIAFSLIWYYEASRIIKNNITDKMESKKKLYHKSIELFLTQRATIIATLGSVIALNNADTDEMLELCTGCDTAFHHMIFDVYLGFEDGRYIDSSGWKPPAAWDARKRPWYKKALKKKGVAFSEIYVDSVRNIPMVSISIPVMQNKDLLGVLTTNVDMSKLKEMMTKINQGNNTTDIFLLDENGKFLFHNTFTYSDVITEVENKKYANCIKQIFDKDITEFSTVINGEKYFFIKDHFSAVDWTLAIGIPYVDLYRDATNLRIKGNIFAAVFICFYIAVIWSIASRMTKQLKALVSALKNIAEGDADLTVRLPLIGNREITDLSRYFTQAIEKIRLSIKSVSENTDALRAVGENLANNVTETASAINQINMNIDNVKEQSLTQAASVSETAATIEEIIRTIKQHNTGIETQSASIIQSSSSVEQMITSIGQITETLEKTNTVIKDFASATEDGKNTVSESKAVMQKIAEESGGLLEASTVIQHIASQTNLLAMNAAIEAAHAGDAGKGFAVVADEIRKLAEESNTQGKTITTTLKALSEEIETLSNSAKKTEEKFNIIFELSGQVQHMSDRLMEAMQEQANGGAEVLTAIKNINSVTTEVREGSHEMLIGGQGVAEEMRKLDKLTRTITYSMNEMASGALQINAAVKDVNEISQKNKESIVNLSVEVEKFKV
>NZ_CP042816.1|WP_148879836.1|2264296_2265550_-|ISNCY-family-transposase
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGICSPKKRRTRKKVHKTRNRRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTKEQVTQFGKIIKYLGIDMFPAHSSQAKGRVERLWQTLQSRLPVEFARRGITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNHLFKIEQNKFAAGTTVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP042816.1|WP_148879025.1|2262367_2262550_-|hypothetical-protein
MAKPTLRVLKLCKLFCFKTSFLLGTTGVRARSDCSSGILAYRGWGCEFKSFNFTIGCWRF
>NZ_CP042816.1|WP_002699726.1|2261632_2262106_-|chemotaxis-protein-CheW
MAMTDAQFQLVTFQLGEELYGVDIMDVKEIVKIQDVRPIPNAPYYVEGIFNLRSEIIPIISLHKRFHLKKAVLDAGDEYLGGFIILHIDNNKLGIIIDRVARVIMVKQGDVQPPPQMITGIGTEYIHGVVRQGSGYLIMLDIRKLFNPKELQKLANL
>NZ_CP042816.1|WP_148879431.1|2260606_2261587_-|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein
MDAVLTCMVEEKIGPGEANQKLIRLIKDSFQVEGAATFRSPAIALAYALRALGLEPGSGVLLSVLAPAWQFTEVQRQGFTPILVDVDAETALMTPSLIADGIQAGGKVVVLHEALGNLPNMQEVLSLNIPVIEDISQSAGAELGEKKSGCFGVFAILGLEERDILTAGGGAALLSAERRNALVLKKLYDVAPPTDILPDINASLAFVQLKQMEKNMQLRQELYELYVRFLMQGRHKTIAPAEGLKNPVYSFPVLLSSGYKDVKQFANKKGVETEPAFSGSIIDTFEKQEEYIQAASLLLRCVLFPLYPRLGMANAEKISKVLRSLP
>NZ_CP042816.1|WP_024752013.1|2259721_2260594_-|NAD(+)/NADH-kinase
MGTTDSRVIIITSTYKPHAVKLSKDIIKFLEARGFSCDQYEYDGMSSENPVKQDYAFAICLGGDGTVLFASRCCAARKIPVFAINFGNFGFIAVVEPEHWQTVLEDYLAGKIKIFERMLLSACILRKRQEFCVFDALNDVVISGSGIAKLVNLEVLFNDVSFGTYKADGVIISTPTGSTAYSAASGGPILDPNVSAFVLTPIAAFSLSNRPIVLPAEGKMTVKVLPTRHRDTILSVDGQELFVLEENDIVSVSASVHKAHLIGCNPEMFYRALRSKLAWSGNSTCPVPIR
>NZ_CP042816.1|WP_024752012.1|2257443_2259132_-|DNA-repair-protein-RecN
MIENIIVKNIALIDSLSLDFASGFNVLSGETGAGKSILIGALSFLLGGKAGTDILRTGAEEGWVSGSFYLDPQHKAATAWLAERDIEPENGRILLRRSIKQNGRSAAWIQSYPVARTDLEVFTSFLVDIHGQHDHQSLFKIAEHRRFLDAYAGLEEETAAFTALYTELSEKRAELEQLNISEKQLNEKIELLNFAVEEITKAKLKADEEQELEAEENKLLQYEKLYEHIEEADAVLTGERGAVSLLKKAINAFGAAAEIDGTLAENMQRLESAYYDLEDIASNVASYSASMSFDPARLEEVQERLSLIYKLKKKYGNTIAEVLEYCDKAQKELEQLVHNADSKTELESEIQKCTQRLFTSGKALSEKRAAAAKTLQTKVEAILAQLGMPKTKFEVQVQLKDKTGNKQTVGPYGFDSIEFLISPNPGEPLKSLAKIASGGELSRVMLALKTVLAAADEADTLVFDEIDTGIGGEVALAVSEHLKKLSEKKQILCITHLAIIAAHADTQIKIEKTSDGTSTRTSAFIIEGQKRTEEIARMLAGDEVSDVSQKHAQELLQKYGTA
>NZ_CP042816.1|WP_044634284.1|2256585_2257386_-|hypothetical-protein
MANEKNKFYTERLNSYQTEIEQLLVREKNILALISKDEFGKEYKKMMLVEEMLYLTTLYFAKYQLSIALIGGKNEDILNDARKTVYKAIIYLEEIVTNFIDVPFSDYKDKVEKIKKIGQRQRYYLIRKMGLVIDMIIDAYGNNTKWKWTFVELEARYATVAKNILDLKDSSATGLDPHSPDYDSTVFHLRLVKQFLAQAADRYREKYEMATFSIEDFRIAIQYLLALRRIHLILNEHEAAEEVKKKAEIWSDKMEKDHQKREARRK
>NZ_CP042816.1|WP_024752010.1|2255388_2256585_-|HD-domain-containing-protein
MFNKAIVLKLFEAFSIQRWNDLIRPFDMVEMDKTAEKMFLAYIIGKYEEKSGKVIDWNKIIDNAFFELLRKIALSDIKAPVQRIIRSEYPEEYQKLNLWVFKKYETLFSGTPLLDDFFAYLNEKSDYNDISLRVLRAAHKYSTIREFEMLKMVNEPFRLSKIAPVLEQDIEDFTDLRGMQLLITKRKPYALITEIEKLRFQIRWNQTPRVPETSVLGHSYFVAALTLLMSKTLGRSRHRTYNNFFGALFHDLPEAVTRDIISPVKQATEHLPDIVKDIEDKIVSEELVPLMDAFYRDEVLYYIQDEFENRILKGGKTCIVDYADLESKYAEPKYKAIDGALIRTADQIAAFVEADSSIEYGIKSDHLLEGRNKILQRYPKGTGVNGLAVDLFFNAYRN
>NZ_CP042816.1|WP_002701542.1|2270152_2270614_+|hypothetical-protein
MAEKNTCIHVLHLIVIILVGIIMIGTVAGLIKASAKQNEIAEEVPPIILQKEDALYGEIGRLRISSADSPPISVIVTPFLQYAKADIALQEELIRKKEILKKVIISWFEKKNAVQLSTFPPDKIKKLLLEELNKQLVLGKIKGIYFEELTLLN
>NZ_CP042816.1|WP_002701539.1|2270663_2271032_+|hypothetical-protein
MTHEAVPAAQIIIAIIPIVGIVTGGSVIFFYLLWRHKQIICQIENNIYIRPSFNLVAFCLLAGIMLTITGFVLTILFAIINGISYVLLGGLIPLAIGISFLSFFYYTTHIDAEILWKGDERA
>NZ_CP042816.1|WP_148879026.1|2271024_2271684_+|RNA-polymerase-sigma-factor
MLKKKILSNNDPKKEQQTQKKIDKEICKAVLNGNTQAFSVLVEKYQQQIYRLGMSFFKNEDDSKDFVQDVMLKAYTALGSFRGDSAFSTWLISIAYNTAINSMRRSQRFVSFAESFEIEAPGETPEERHINNCVKLSIREAVENLCEKYRVCIDLYFFYDMPYADISSITGLPVNTIKSHVFRAKKILREYLTEEQVLFRSNENPSSGIFAIFQLRYDL
>NZ_CP042816.1|WP_148879027.1|2271859_2272144_+|hypothetical-protein
MQNIYQLSEKPVQTETLSDAKILLWMLTGLLIVIGFIILPFTEIGQWGINHLGIAFIIPFALICAISVSAFYAVFVGKNIDFFVKQFDLPTSLQ
>NZ_CP042816.1|WP_148879837.1|2272474_2272957_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MNTIQTITVKSPIGVLRIEETGGVISSIGIHKENAPIVSCTSSSVLNHCVDELRAYFDGKLKRFTVPVIFLGTEFQQRVWKALQEIPYGQTQSYKELAELIGAPKAYRAVGNAANKNPILIIVPCHRLIGSDGSLTGFACGIEAKRFLLEMEKDLQQALR
>NZ_CP042816.1|WP_002701529.1|2272953_2274147_-|DUF1343-domain-containing-protein
MKKLLCIFSLLCCTIFLFAEKIILGIERVYEHRHLFEGKRVGLITNQTGINAKGVSSIDILAEAVNLTALFSPEHGIRGDAREGAAIEDTIDAKTGLTVYSLYGKTKRPTEQMVQDIDILCFDIQDVGARFYTYIYTMAYAMEACAKFNKTFVVFDRPNPISGSAVEGTILDMEYRSFVGYYPIVQRHGMTVGELARLFNTEYKIQCTLHVIAMKNWDRNSYFNSLPLPWIPTSPNIPSAETALLYAGICVFEGTNISVGRGTTMPFQYIGAPFIDAPELADSLNRLNLSGLLFVPAYFTPSLSLHKNIPCKGVQIIVTDKAQCKPVYAGFVILYTIRELYQTDFKIINAPNKYCGLNLLTGTNKITENKLSLTELDALMQKDTKRFMRIRRRYLLY
>NZ_CP042816.1|WP_024752018.1|2274143_2276105_-|penicillin-binding-protein-PBP4B
MKKNVIFVLSILLTACASSPKIIVSPTTAPRFLSEQHEAEFQVDTVFPIDFSNYDDSILTNNFISFIGFSEQGKLYFTAKGIKNFNLYVNGYNINTKKICDQENTCIDISTITKNGKNILYIGNIQIVKKGDQKTETKPFLKLQIPYPEIIYKPTNIGTVDYRAFQLVDSIINAEVQNGFPGAQLVIVKDGKLLKSSSYGNISTVDIFGKPVKKPIPVTNSTLFDLASNTKIYAANFALQKLIYEQKISIHDRVVSFFPEFVDSKKAKFTGKKYITIHDLLTHQAGFPAGARYFAKISKPLTKTIRKKNSKGKIRYVIVVSDEVLSPRERTFRLIMETPLVYKPGTQVLYSDIDYLLLTFIIEKITKMPLDEYVTKNFYKPLNLNSICFEPLKHNFMLDEIAATAITGNTASSTDENKNLRRFLIHGTVHDEEAFHSMEQVSGHAGLFANAESLAVLAQVMLNRGGYGTIKLFDENTVSLFASQSYISPSYGLGWRRQGAQNYAWAFSPLADSNTVGHTGWTGTLTVIDPKKNLIIILLTNAKNTPYPDKKRSAVKTEGDYYLAKCYGAITTILYNAFENTDKDFFDFMLIELVEKKYAMLKAIKNFNNSGYIKDLRALMDTVKSSAKHSSKLRAFLKSPTGKAIEKKLESIK
>NZ_CP042816.1|WP_148879838.1|2276213_2277932_+|potassium-transporter
MKQKNGMLFLAASMSILLIILEEINSFSSVMYIAFGGNILILLLIGATILLPMKNEKYAKIFIQKNLLKLLTIILLIALFVLAKITSGIKTVNIYTLFNLIKNIFLLALVITAIRGQGKISKQAVTNPAQTLILSFLTVIIIGAYLLKFPISSSDHVGLSLLSSLFTATSAVCVTGSTVINVAEQLSGFGKLILILLIQIGGLGFMVLSFFGMLALRRKLSLQDKLIVSYMINEDDMSDLFKGLKVIIIATFTIEAISAFFLFFGFMQIEGFGIKALAYACFHAVSAFCNAGFSLYPNNMESFTGNYIIGLVIPCTIILGGISFVVISEMAMRSKRRIKNLFSAQKKALKPMSLNTYVVLKITAVVLIVSFSGFYLLEHEYAMKDYGLGTQYLASFFQAVTLRTAGFSSLPFGSFRQPTLFFMVFIMFLGGASGSTAGGIKLNTIAAIIASFKSFLKNEQHAKIRNMVLHIKQIEKAFLIFGFGLSVVCVGVFCLSITERFYFLPLLFETVSAFATVGLSTGITPELTVYGQLIIIVLMFIGRVGPLTILTAVSKPEPESNITYAYSSLAIG
>NZ_CP042816.1|WP_024752020.1|2279128_2279836_+|TrkA-family-potassium-uptake-protein
MSIKKNFVVIGLGAFGNKICEILTEGGGNVIAIDKNADTLDKVKNFVSAAILIDTTNEGDLLKAPLDDIDIAIVAIGDNIEASILTTTLLKQRGIPYIVARTISPLHATVLRRVGANEVLNIEVSSATSLARRLVAPDRTNSIAITEDVTIREIIAPKFFDDKTIDDLALRDKFNLKIIAAVRTEIDIDSAGNSIPKKKLYYPDNIFTFKSADRIFVLGKNHDIKELIFTSENLK
>NZ_CP042816.1|WP_039943365.1|2280630_2281923_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKIHPIAKELNEILEQTVAGKLLSNLGKRLFFPKGIIAQGAEVKLKAPNANATIGMMCKNKIPVELNALHDLLPAFSPSEIVAYTPTAGTETVRKLWYNNMLLKNPSLENKKISLPVLVPGLTAGLSFTLDLFLSSKDRLIVPQPAWDNYQLIAEARRNASTAAFPIFDGDNFNIKGFTSCVEREAKSGMLKILLNFPQNPSGYTPTEQEVDSMYSILFEQAEKGVAILIIFDDAYFGLEYESEAIKESLFVRFADAHKNILAVKIDGPTKEDYVWGLRTGFITFASKGFNDIHYETVIKKLLGAIRSSVSCSATPSQTFAVKILENEKTDSEIQNLHTLLNDRYKEVKRVLKKFSSSEKLKPLPFNSGYFMCMHCSGFNAETLRQKLLNEYQIGVVAVDDCHIRIAFSSLDIENIEPVYTAIFEAAENL

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Crispr_ID: NZ_CP042816_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_12

2288828-2288940

Orphan

Consensus_repeat	Method
CTGCGTGGAACCACCGCCGTCCATGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_12

>merge|NZ_CP042816|12|2288828-2288940|CRISPRCasFinder
CTGCGTGGAACCACCGCCGTCCATGGCAAAATTATACCGTGCGAGTTTTAAAGCTTTGTAAACTATTTTGCTTTAAAACGTCGTTTCTGCGTGGAACCACCGCCGTCCGTGGC

>NZ_CP042816|12|12|2288828-2288940|CRISPRCasFinder
CTGCGTGGAACCACCGCCGTCCATGGC	AAAATTATACCGTGCGAGTTTTAAAGCTTTGTAAACTATTTTGCTTTAAAACGTCGTTT
CTGCGTGGAACCACCGCCGTCCGTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_039943365.1\|2280630_2281923_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181512
NZ_CP042816.1\|WP_024752030.1\|2297867_2299067_+\|threonine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236182
NZ_CP042816.1\|WP_148879839.1\|2286677_2288018_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP042816.1\|WP_039943366.1\|2283780_2284185_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379279
NZ_CP042816.1\|WP_024752028.1\|2294118_2295894_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP042816.1\|WP_024752034.1\|2306562_2308107_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP042816.1\|WP_024752022.1\|2282942_2283788_-\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350624
NZ_CP042816.1\|WP_024752033.1\|2305052_2306549_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|225533
NZ_CP042816.1\|WP_148879838.1\|2276213_2277932_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|273349
NZ_CP042816.1\|WP_044634917.1\|2296547_2297738_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP042816.1\|WP_148879032.1\|2301059_2304668_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP042816.1\|WP_002701506.1\|2284181_2284511_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP042816.1\|WP_148879840.1\|2289025_2290510_-\|transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP042816.1\|WP_081718643.1\|2300723_2300978_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_044634916.1\|2299216_2300416_-\|methionine-gamma-lyase	unknown	unknown	gnl\|CDD\|168478
NZ_CP042816.1\|WP_024752020.1\|2279128_2279836_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP042816.1\|WP_024752024.1\|2284541_2286674_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP042816.1\|WP_024752018.1\|2274143_2276105_-\|penicillin-binding-protein-PBP4B	unknown	unknown	gnl\|CDD\|179620
NZ_CP042816.1\|WP_024752027.1\|2290919_2293670_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP042816.1\|WP_002701513.1\|2281987_2282980_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|285027

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_039943365.1\|2280630_2281923_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181512	PRK08637, PRK08637, hypothetical protein; Provisional.	7.42202e-161
NZ_CP042816.1\|WP_024752030.1\|2297867_2299067_+\|threonine-ammonia-lyase	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NZ_CP042816.1\|WP_148879839.1\|2286677_2288018_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	3.9803e-46
NZ_CP042816.1\|WP_039943366.1\|2283780_2284185_-\|hypothetical-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	0.00150067
NZ_CP042816.1\|WP_024752028.1\|2294118_2295894_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP042816.1\|WP_024752034.1\|2306562_2308107_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	2.72909e-120
NZ_CP042816.1\|WP_024752022.1\|2282942_2283788_-\|M15-family-metallopeptidase	gnl\|CDD\|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	1.17207e-64
NZ_CP042816.1\|WP_024752033.1\|2305052_2306549_+\|histidine-ammonia-lyase	gnl\|CDD\|225533	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism].	5.07692e-152
NZ_CP042816.1\|WP_148879838.1\|2276213_2277932_+\|potassium-transporter	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	4.93549e-93
NZ_CP042816.1\|WP_044634917.1\|2296547_2297738_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	1.14173e-75
NZ_CP042816.1\|WP_148879032.1\|2301059_2304668_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP042816.1\|WP_002701506.1\|2284181_2284511_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	6.77129e-19
NZ_CP042816.1\|WP_148879840.1\|2289025_2290510_-\|transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.89038e-14
NZ_CP042816.1\|WP_044634916.1\|2299216_2300416_-\|methionine-gamma-lyase	gnl\|CDD\|168478	PRK06234, PRK06234, methionine gamma-lyase; Provisional.	0
NZ_CP042816.1\|WP_024752020.1\|2279128_2279836_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	6.28896e-40
NZ_CP042816.1\|WP_024752024.1\|2284541_2286674_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.6973e-43
NZ_CP042816.1\|WP_024752018.1\|2274143_2276105_-\|penicillin-binding-protein-PBP4B	gnl\|CDD\|179620	PRK03642, PRK03642, putative periplasmic esterase; Provisional.	4.55054e-133
NZ_CP042816.1\|WP_024752027.1\|2290919_2293670_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP042816.1\|WP_002701513.1\|2281987_2282980_+\|AAA-family-ATPase	gnl\|CDD\|285027	pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	5.58739e-89

>NZ_CP042816.1|WP_148879839.1|2286677_2288018_-|SpoIIE-family-protein-phosphatase
MALLITNYESFSEFTLRDKFFLASFIFMIFALTASGISEYISSQIKKNVYLQTETALFNNFIERLRFCYRHEELVAAIQEELEYQADCAVLLANTKTEHVIYNSTSAFISDPETYDLMRRRFSTDWTWYWAEGLYFFDTNMQLVGDKRKARGLFIASGDIRFFLICRFIRNTEPEIFPILLHEFNDYLNREKTLGQLLYYSQLFQEWSMVANTQRSFLPKKLPDTTSIEVGAYFQPLVHVSGDYYDIIKIDEDKTLLVTGDVSGKGLAAALVMGIIMNTIQIIENKEDLAGIIYAIDTAIKRMKLQDKYTVLFLGLIDTKKMTIKYVNASMEKPFILTESRPTFKVKTLESNCSVVGIIDLDEVIVEERPLYHGDVILMLSDGIPETMDANGIELGETDYYLDSIKEFAHNPPAEMVKNIADMALSFSANNAMRDDVTIVAVKLKR
>NZ_CP042816.1|WP_024752024.1|2284541_2286674_-|SpoIIE-family-protein-phosphatase
MGLLFFAYFFAVIIILDSVYLKFNDRQSSVFLRRIAHTAGIAALLSAVSISFVMYNKVEAQAFMFKLAMVAFTLTSHSLLNMTFKVPYFEKNKTFSILNFLLHTFGIFLVFFAVGRFSWNSIVSFKFYSKKILPFLTGAELYVYIFLFAVPVVSFILLVVKAFKIKSNIYRQQLILIAFSVLAALISWIVIVRLFAFFPWVFSLFPIGILCVLFISQAAFSLTSVFDLKQILLSFARFIFFTLMFALTAGLAAAFIVQTSPTLRMLLLGGIITSFILFITRDFITKKFAFLLGDTSDYESKLTEELQQFDYTLGRDSILQSFVELMKTRIDCCGLGILITDENGVFKTVYSDFEKRLSIPTGKKCFAFLMNRNVSVITKTEIVANYIYENIKSEMLDVFTEMDAQTIILIREGQKLIGCIGLGAKNRGAEYNQYDIRVLRNIYSYFFLIIYYLSNIAKQDIILTVDREVEMSDQIIGSIQKNMDKIENKAITVGSVSYSAHQLGGDFIDFIKLTEDRFLFLIGDVAGKGLAASMSMVILKSVIHTFLQETGDFKKLIIKINSFVKDNLPRGTFFAGLFGIIDFPTNTVYYLNCGIPLMAMYIQTYQNVIEVQGEGRVLGFVKNIAPFLKVRKITLHPKDVVVFTTDGVLEAQNLRGDRFGNDRVNRILQANKDKNTEEIAKDIYSGLLDFISNEIQDDVTILVMKNNEKP
>NZ_CP042816.1|WP_002701506.1|2284181_2284511_-|STAS-domain-containing-protein
MESVQITEKITPDYILLSVVGSINSYTYQEFESKIYSSIKENNIVLELSNVTNMSSSGLGVLMSAHDEGEEHGHKLYILAPSEIVRLAIDSTGFSEMFTIIHSVSDLSQ
>NZ_CP042816.1|WP_039943366.1|2283780_2284185_-|hypothetical-protein
MSRVCRLTVTPDTKHLAQLEALIETSPAIPDNKRMNILIIVTEMFDNIAEHALIPDGQSVTMEIKISKQNTIVTFIYKTKNFEELLEGVHTGRPHFDKNAKRYRGLGLIMSKNLSQKVKYKKSIFNTARLIFYV
>NZ_CP042816.1|WP_024752022.1|2282942_2283788_-|M15-family-metallopeptidase
MYKKRIGLCFLICIFFAGYSKAHSDDSFQKEKNTMIPLTVSPAEKIFVAPSSIPKKIIENIIQNQKEFIFELSEVLAEEKEYLLILVDKQHPLPDGYTPKNLVALTNTRAYAINRSDLSLTKTAEEALHIMARAARKDGVTLLVSSSYRSYLYQVNLFARYVRESGEKAAERFSARPGTSQHQLGTVVDFGSITNEFANTRAGKWMEAHAGNYGWSLSFPKDYETVTGYVWESWHFRYIGIKACRLQKKWFNDIQQYMLEFIDAWKRQVVTAEEQPKAISE
>NZ_CP042816.1|WP_002701513.1|2281987_2282980_+|AAA-family-ATPase
MEMQKPVEIIQRFKQEMKKTIIGQDALIEGILTAYIAKGHVLLEGVPGLAKTLIVKTFASIVGLDFKRIQFTPDLLPADLIGTLIFNQAQADFSVKKGPIFANIILADEINRAPAKVQSALLEAMAEGQVTIGEKTYILPEPFFVLATQNPIEQEGTYPLPEAELDRFFAKLFVPYPSFEEEKKIITGFSDIVTNAESERQDTIKILSKEELGVLQTAAHAIHCDETLVEYIASIVAATRPITEKSDTVTKGSYLSYISFGASPRAGIALYKAAKIKALFSERDYVTPQDIKDCAPAILRHRLKLSYEAIADNLSADDIILKLLSVVPQP
>NZ_CP042816.1|WP_039943365.1|2280630_2281923_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKIHPIAKELNEILEQTVAGKLLSNLGKRLFFPKGIIAQGAEVKLKAPNANATIGMMCKNKIPVELNALHDLLPAFSPSEIVAYTPTAGTETVRKLWYNNMLLKNPSLENKKISLPVLVPGLTAGLSFTLDLFLSSKDRLIVPQPAWDNYQLIAEARRNASTAAFPIFDGDNFNIKGFTSCVEREAKSGMLKILLNFPQNPSGYTPTEQEVDSMYSILFEQAEKGVAILIIFDDAYFGLEYESEAIKESLFVRFADAHKNILAVKIDGPTKEDYVWGLRTGFITFASKGFNDIHYETVIKKLLGAIRSSVSCSATPSQTFAVKILENEKTDSEIQNLHTLLNDRYKEVKRVLKKFSSSEKLKPLPFNSGYFMCMHCSGFNAETLRQKLLNEYQIGVVAVDDCHIRIAFSSLDIENIEPVYTAIFEAAENL
>NZ_CP042816.1|WP_024752020.1|2279128_2279836_+|TrkA-family-potassium-uptake-protein
MSIKKNFVVIGLGAFGNKICEILTEGGGNVIAIDKNADTLDKVKNFVSAAILIDTTNEGDLLKAPLDDIDIAIVAIGDNIEASILTTTLLKQRGIPYIVARTISPLHATVLRRVGANEVLNIEVSSATSLARRLVAPDRTNSIAITEDVTIREIIAPKFFDDKTIDDLALRDKFNLKIIAAVRTEIDIDSAGNSIPKKKLYYPDNIFTFKSADRIFVLGKNHDIKELIFTSENLK
>NZ_CP042816.1|WP_148879838.1|2276213_2277932_+|potassium-transporter
MKQKNGMLFLAASMSILLIILEEINSFSSVMYIAFGGNILILLLIGATILLPMKNEKYAKIFIQKNLLKLLTIILLIALFVLAKITSGIKTVNIYTLFNLIKNIFLLALVITAIRGQGKISKQAVTNPAQTLILSFLTVIIIGAYLLKFPISSSDHVGLSLLSSLFTATSAVCVTGSTVINVAEQLSGFGKLILILLIQIGGLGFMVLSFFGMLALRRKLSLQDKLIVSYMINEDDMSDLFKGLKVIIIATFTIEAISAFFLFFGFMQIEGFGIKALAYACFHAVSAFCNAGFSLYPNNMESFTGNYIIGLVIPCTIILGGISFVVISEMAMRSKRRIKNLFSAQKKALKPMSLNTYVVLKITAVVLIVSFSGFYLLEHEYAMKDYGLGTQYLASFFQAVTLRTAGFSSLPFGSFRQPTLFFMVFIMFLGGASGSTAGGIKLNTIAAIIASFKSFLKNEQHAKIRNMVLHIKQIEKAFLIFGFGLSVVCVGVFCLSITERFYFLPLLFETVSAFATVGLSTGITPELTVYGQLIIIVLMFIGRVGPLTILTAVSKPEPESNITYAYSSLAIG
>NZ_CP042816.1|WP_024752018.1|2274143_2276105_-|penicillin-binding-protein-PBP4B
MKKNVIFVLSILLTACASSPKIIVSPTTAPRFLSEQHEAEFQVDTVFPIDFSNYDDSILTNNFISFIGFSEQGKLYFTAKGIKNFNLYVNGYNINTKKICDQENTCIDISTITKNGKNILYIGNIQIVKKGDQKTETKPFLKLQIPYPEIIYKPTNIGTVDYRAFQLVDSIINAEVQNGFPGAQLVIVKDGKLLKSSSYGNISTVDIFGKPVKKPIPVTNSTLFDLASNTKIYAANFALQKLIYEQKISIHDRVVSFFPEFVDSKKAKFTGKKYITIHDLLTHQAGFPAGARYFAKISKPLTKTIRKKNSKGKIRYVIVVSDEVLSPRERTFRLIMETPLVYKPGTQVLYSDIDYLLLTFIIEKITKMPLDEYVTKNFYKPLNLNSICFEPLKHNFMLDEIAATAITGNTASSTDENKNLRRFLIHGTVHDEEAFHSMEQVSGHAGLFANAESLAVLAQVMLNRGGYGTIKLFDENTVSLFASQSYISPSYGLGWRRQGAQNYAWAFSPLADSNTVGHTGWTGTLTVIDPKKNLIIILLTNAKNTPYPDKKRSAVKTEGDYYLAKCYGAITTILYNAFENTDKDFFDFMLIELVEKKYAMLKAIKNFNNSGYIKDLRALMDTVKSSAKHSSKLRAFLKSPTGKAIEKKLESIK
>NZ_CP042816.1|WP_148879840.1|2289025_2290510_-|transposase
MSIPQSIKQFRPTQFGAVEIRFIGNYYYVYQVSSKWDGAKGRAQKVTGKSIGKITEADGFIPNANGLRLMQQMRSTADVAPTVKNYGAYELLQQLALELNDKLKQHFPDIFREIRTIALLRLVGSICSAKMIQPLFLDSYMSTLCTDIAVSEASVRKFITLLGSLQEQADAFMRDQVMPANALLFDGTSIFTRSADSLAAKGYNPQHSRGTQARILYVFEKNSHKPVFYRVLQGSIVDKVAFMETVHAAGCKDCIIIADKGFYSKENLAALMNAGLQFILPLRKDTVNVEPAFYENTDDSKWDGVFTYNKRPIWFRKKTSGTKGNFIYTYRDDSRKAELVGQYVEKVEKFYGERTHEPKDVLKKIRMGYFSFCSNLDVSARDIYMNYKERWDIEQCFDYLKNSVSQSASHAHTDEYFRGWAFVNHISLLYYYGLLNALRNSKLDEQYSASDVLKLTKNIYLVDSGDNQGFKLSAIQKRTQRILDTLGIELLCNN
>NZ_CP042816.1|WP_024752027.1|2290919_2293670_-|preprotein-translocase-subunit-SecA
MLADTIIKFFFGSQHERDLKALLPILHKINAKEAWALRLSEADFKQKTADFKERFQKGESLDDFVPEAFAMAREAARRILGERPYDVQMLGSLVLHSGRIVEMKTGEGKTLMSVAAAYLNSLSGKGVHVVTVNDYLAERDTEWMRPVYEYLGVSVGTILSNMDNDARKIAYNCDITYGTNNEFGFDYLRDNMQLSLDEKTQRGFSFAIVDEIDSILIDEARTPLIISGSAEDDTQRYFEVDKLINQLTEVQKNPETGEYPNEVEGEEVIGDYIIDEKSKRVSFSGPGMLHIQDILLNQGLIQGSLFDEENFEYIHYFTQSVRAHILYHIDVDYVVKDGQVQIVDEFTGRILEGRRYSDGLHQAIEAKEHIRIAQRNRTMATVTFQNFFRMYDKLSGMTGTADTEAVEFNKIYKLDVVVIPTNLPVARKDEHDVIYMNEDEKWAALCDEIADAYKRGQPVLVGTVSIEKSEKLSALLTRKGVRHEVLNAKNHAREALIIAEAGAKGSITIATNMAGRGTDIKLGGNPEFRAKKRAGTEATHEEYLRAYEDEYKKWQDEYEKVKELGGLYVIGTERHESRRIDNQLRGRSGRQGDPGRSKFFLSLDDDLMRLFGGESLKRFMGKVGMEPGEPIEHPWLNKSIEKAQTKVESRNFDIRKHLLEYDDVLNEQRSFIYEQRDSILADSNLSERIYVTILEYLDEGFADLKGGSKKEKEEVITAFQAELKRLFNYTLDAEDIPLLDSKEAESVKTKIFEAIKANIEEKIALAGAENINMFLRYQYLQAIDKKWLDHLENLESLREAVYLRSYGQKNPLTEYKLEGFDIFYSMLDEIRLSIASRMALVTVRTDDDSSAGRQVRRRQGTAQHNSMEAFHSHGASPMGASSQPDKVQVVRTMPKVGRNDPCPCGSGKKYKHCCGR
>NZ_CP042816.1|WP_024752028.1|2294118_2295894_-|ABC-transporter-ATP-binding-protein
MKDYTDKIKTSVLIKRFLPYFRKYYGVLALDLTCAFFTTLCEIVFPLMVRNITNKAIWDISTLTMDFVIKICIIYFLLRLVDTAANYYMASVGHIMGAKIEKDMRRDLFAHLQKLSFSYFDNTKIGQIMGRITSDLFEIAEFAHHCPEEFFIAGVKILISFIILCQANILLTVIVFSVIPLMIISTVYFRRRMRLAFKRSREQIGDLNARVEDSLLGVRVVRSFANEETEEQKFERGNNGLLNIKRYQYRYMAGFKAVTQFFDGLMYVTVLLCTAYFLIKGKITAGDMIAYMLYVSMLLASIKRIVEFAEQFQRGMTGVERFIEIMDAKVEITDREGATEIKDAKGDILFDKVSFQYPEHDKVVLSNIDLHVRPEQKIALVGPSGGGKTTLCNLIPRFYEVSKGRILLDGKDIRDITQESLRSQIGVVQQDVYLFSGTVSENIEYGKIGASREEIIEAAKKAGAHDFIMELEDGYDTCVGERGVKLSGGQKQRISIARVFLKNPPILILDEATSALDNENERIVQKSLETLAKGRTTFTIAHRLTTIRNADTILVLTENGIEESGSHETLMKKKGRYYSLYQLYGQGYFEE
>NZ_CP042816.1|WP_044634917.1|2296547_2297738_+|dicarboxylate/amino-acid:cation-symporter
MKKFGLLPRLILAIVLGIVIGFVAPLPVVRTLATFNGLFGNFLSFVIPLIIVGFVAPGIAALGSGAGKSLAITAGLAYGSTITFGTLAYIAGSIFLPIFTRGGSMHVFEQTDAVTPFFNSPMPPIFGVTTALILSFILGVGIASLGEKRDALKNMVHEFADIVTKLIKIIVIPLLPVHICGIFATMAHEGTVARVMSVFAKVFILIIIMHWLTIFIQYTLASLIGGGNPFSKIRVLIPAYLTAIGTQSSAATIPVTLAQTIKMGVNKGVAEFVIPLCATIHLSGSTITLLTCSMTIMFLNGMDTSFTAIFPFILMLGVTMVAAPGVPGGAVMAAIGIMESMLGFDKSMIALMIALYLAQDSFGTACNISGDGAIACIVNKINGYKLTPGQKTELVK
>NZ_CP042816.1|WP_024752030.1|2297867_2299067_+|threonine-ammonia-lyase
MINLQMIHEARQKVSEIINATPIFTASRLGDNIYIKMENLQKTGSFKIRGAYNKISNLTDEEKKKEVIACSAGNHAQGVALSATKQGIKSYICVPSVTPLSKIDATKGYGGEVIVVEGSFDDAMKRALELKEEHNYTFIHPFDDEYVIAGQGTIGLEILEQLEDIENIIVPIGGGGLISGIALAVKETNPKVKIIGVEPENAASMRDSIKANKRMLLDSVNTIAEGVAVKIPGEQTFALVKKYVDEIVTVSESEISNSILRLLEEGKTTAEGAGACSIAAAISDKYSFKGKTVCVLSGGNINVNMISKIIKTGLFGSGRLTEVVTTLVDKPGELVKILEIVKKCGANVLNINQYSESSHMQLNTMVVRIVLETFNETHQRAVWQALRDAGYEHFREAIY
>NZ_CP042816.1|WP_044634916.1|2299216_2300416_-|methionine-gamma-lyase
MDKDELKNMGFASKQIHAGYTKNTYGALATPIYQTSTFVFDSAEQGGRRFALEEAGYIYTRLGNPTTSAVEEKLACLENGEACVATSSGIGAISSSLWTLVSAGDHIVAGKTLYGCTFSLLSRGLTRFGVDVTFIDTRDPENLRKAMKPNTKVVYLESPANPNMYLCDIQALSAIAHQNSDCKVIVDNTYMTPYLQRPLNLGADIVVHSATKYLNGHGDVIAGFAVGKKDVIDQIRFLGIKDMTGSVLGTFEAYLIGRGMKTLDIRMEKHCANAQKVAEFLETHPTVESIAYPGLPSFPQYELAKRQMALPGAMIAFTVKNGLEAGRKLMNSVKFATLAVSLGDAETLIQHPASMTHSPYTAEERAASDIAEGLIRISVGLEDAKDIIDDLRQALNTLI
>NZ_CP042816.1|WP_081718643.1|2300723_2300978_+|hypothetical-protein
MVPNRSDVLKQSNLQSFKTRRFGFDKDGKNPEPPRTAVVLNRIEFENYHSYINRSFQTHRFHFATDGKMKPLCRALFYTIFYHS
>NZ_CP042816.1|WP_148879032.1|2301059_2304668_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MQKKTQTMTGNNAASYVAYAFTDVAAIYPITPSSDMAELIDSWSANGKKNIFGQTVLVSELESEAGAAGAMHGALSAGALAASFTASQGLLLMIPNMYKMSGELLPGVLHVSARALSSHALSIFGDHQDVMACRQTGFGMLASGSVQEIIDLGGIAHLAAIKGRVPFMHFFDGFRTSHELQNVELIDYEDFAKMIDWKALNDWRTTAMNPEHPFTKGTAQNPDIYFQAAEASNRFYIDAVEIVADYMKQISSLTGRTYKPFDYHGAADAERVIVAMGSITETAEETVDYLVSQGEKVGLIKVRLYRPFSPQYLFEVMPKTVKKIAVLDRTKEKGALYEPLHLDILGAYIDVPNKPIIVGGRYGLASKDTTPTMVKSVFDNLKSDTPKNNFSVGIEDDITHLNLPMPEEIKTEPTGNIRCKFWGFGSDGTVGANKSAIKIIGDSTGMYAQAYFAYDSKKSGGVTVSHLRFGKKPIKSAYLISDADFISCSKQSYVHQYDLLKGLKKGGTFLLNCLWSDAELENTIPAAMKKFIAKNDIKFYTINATEIAQKIGLGHRINMIMQSAFFKLAEIIPIEQAVESLKSSILSTYGKKGDDIVKMNYTAVDMGIESPHQVTVPKSWADAEDKSIDNAHLPPYIRNILVPINRLEGDRLKVSAFKGVEDGRMPNCTSRFEKRGIAVEVPHWIKENCIQCNQCSFVCPHAVIRPFLLNEKENSAKPQVFETIKANGKGLEDMTYRMQVSVLDCTGCSNCANICPAKNKALVMKPLAEEEAQAANWDFAVDEVSNKHGVMDQFSVKGSQFKQPLLEFHGACAGCGETAYATLVTQLFGDRMMIANASGCSSIWGGSYPTAGFSYNEKGKGPTWASSLFEDNANYGYGMALGTRKLREQAEDYMKKFLELNVGTDFTPLFKEWIENKKNLAANVITCDKIKALFDKHQKPVNQIIKNTPEADYLPKPESHVFKYDTGNIEADRLLEYIYKLKDFLVKKSVWSFGGDGWAYDIGYGGLDHTMASGEDFNILVFDTEVYSNTGGQSSKSTPTAAVAKFAAGGKRMRKKDLGAMLMTYGYVYVAQVSLGANMNQLVKALKEAESYDGPSIVLCYAPCVNHGLRSGMGRSVEQEKKAVEAGYWHLYRFDPRLKKEGKNPFQLDSKEPTASFQDFINSEVRYTSLKKTFPDVADELFLKAEEDAKDRYDRYKKMAQN
>NZ_CP042816.1|WP_024752033.1|2305052_2306549_+|histidine-ammonia-lyase
MDTLLLTGTPLSLDDVYSVAYDRRSVEISEEAEKRVQTARQILFDMAAEGKPVYGLNRGVGWNKDKEFDSEFFATYNRNLLNSHCLGVKPYHTDEQVRAILLLRLNKALTGHTGISAELLYHYRDFLNYGIHPKIPMRSSIGEGDITTLSHIGLAFIGEEDVSFNGETMNSRVAMEKVGLKPAKLGPKDGLSIVSCNAQGEAMTAIVLKEIEDVIQISNLIFCLSLEGLNGVVQSLREDVNAVRGIKGQIKAAKMCREFLKGSFLYDFDPERALQDPLSFRCAHAVNGSMYDAMEYVKEQLLITMNTTDDNPCILIDEHTAFVSANFEITSLAIGVEMLATALSHISKTSCYRMIKLADPAFTKLNRFLTPEDVKTIAFGTIQKTFTMLDSQNRGLANPSSMDFYSLAGTIEDHASNLPLACYKIFQMIDNIYYIIGIEAMHAAQAIDLRKNYKLGTGTKKAYALIREVLPFYSEDRNLSKDIEKIYEFIKSKKLLHI
>NZ_CP042816.1|WP_024752034.1|2306562_2308107_+|BCCT-family-transporter
MAENQKKEIRWAVFIPALAFVLIAAITGIVSNETLTSVSNSFFAWSLESFGWLYQITLIAVLIITCVIMFSKLGSVRIGGKDAKPKYSFGTWFAMTLTGGVATGIVTWGVNEPIIYLGNIWGELDAVGITPGTPEAARFAMGRCFYNWTFIPYAIYALAGVVVAYVYFNKKQQLNVTSTLEPLFGEKIKKGIIANIIDTLSMLAIAIGLCTALTMCITLITTGLNASYGVTNNLKLFVIVGVLIVAMFTLSSYVGLDNGLKKLAGINAYFYYGLLLLLLVTGPTLYIVRNTTAGMAVWLDKFWLWGLDPIDIGGAPLTRSWTLFDFAFWVAYAPVTGIFLGQISYGRTIRECLIVNLVLPSVFGIIWFGVWGSTAMNMQLTGQLDLVAIIQNSNAVMGLFEFIKNMPLAVILVPVNLFVILISFVTAADATANNVASMCIKNIPIGSEAPRYLKALWGIIIGIIAIVMAAFGGGEQGVAGVKSLAAAGGFIVLFIFILQVISAVKMFFVDKIVE

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Crispr_ID: NZ_CP042816_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042816_13

2348727-2348816

Orphan

Consensus_repeat	Method
TTTTGACACGGACGTCAAAAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042816_13

>merge|NZ_CP042816|13|2348727-2348816|CRISPRCasFinder
TTTTGACACGGACGTCAAAAACTCAGAACCGCCACGGATGGCGGTGGTTCCAAGCAGACGGTTTAGTTTTTGACACGGACGTCAAAAACT

>NZ_CP042816|13|13|2348727-2348816|CRISPRCasFinder
TTTTGACACGGACGTCAAAAACT	CAGAACCGCCACGGATGGCGGTGGTTCCAAGCAGACGGTTTAGT
TTTTGACACGGACGTCAAAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042816.1\|WP_024751819.1\|2348869_2350375_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|180842
NZ_CP042816.1\|WP_044634936.1\|2359003_2360266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP042816.1\|WP_148879849.1\|2365249_2366887_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP042816.1\|WP_148879848.1\|2351837_2353553_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP042816.1\|WP_002697897.1\|2338933_2339458_-\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|223877
NZ_CP042816.1\|WP_082048247.1\|2340588_2341998_+\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP042816.1\|WP_148879041.1\|2346569_2346785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024751815.1\|2339728_2339977_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NZ_CP042816.1\|WP_002697896.1\|2339476_2339710_-\|KH-domain-containing-protein	unknown	unknown	gnl\|CDD\|224750
NZ_CP042816.1\|WP_148879847.1\|2351196_2351799_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP042816.1\|WP_148879846.1\|2346881_2348063_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP042816.1\|WP_002695094.1\|2342219_2342930_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199892
NZ_CP042816.1\|WP_082048242.1\|2341930_2342146_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_044634469.1\|2363498_2364290_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|213994
NZ_CP042816.1\|WP_024751814.1\|2338208_2338937_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP042816.1\|WP_044634937.1\|2353552_2355283_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP042816.1\|WP_148879845.1\|2343151_2346427_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042816.1\|WP_024752382.1\|2361066_2362593_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_024752383.1\|2360688_2360934_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042816.1\|WP_002695105.1\|2363224_2363506_-\|acylphosphatase	unknown	unknown	gnl\|CDD\|376373

Protein	Function_ID	Function_description	E-value
NZ_CP042816.1\|WP_024751819.1\|2348869_2350375_-\|IMP-dehydrogenase	gnl\|CDD\|180842	PRK07107, PRK07107, IMP dehydrogenase.	0
NZ_CP042816.1\|WP_044634936.1\|2359003_2360266_-\|hypothetical-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	8.14277e-06
NZ_CP042816.1\|WP_148879849.1\|2365249_2366887_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	0.000166141
NZ_CP042816.1\|WP_148879848.1\|2351837_2353553_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.84288e-134
NZ_CP042816.1\|WP_002697897.1\|2338933_2339458_-\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|223877	COG0806, RimM, RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis].	1.94221e-34
NZ_CP042816.1\|WP_082048247.1\|2340588_2341998_+\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	2.82749e-84
NZ_CP042816.1\|WP_024751815.1\|2339728_2339977_-\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	1.77002e-36
NZ_CP042816.1\|WP_002697896.1\|2339476_2339710_-\|KH-domain-containing-protein	gnl\|CDD\|224750	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only].	4.10131e-24
NZ_CP042816.1\|WP_148879847.1\|2351196_2351799_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.15394e-12
NZ_CP042816.1\|WP_148879846.1\|2346881_2348063_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.41425e-24
NZ_CP042816.1\|WP_002695094.1\|2342219_2342930_-\|hypothetical-protein	gnl\|CDD\|199892	cd07184, E_set_Isoamylase_like_N, N-terminal Early set domain associated with the catalytic domain of isoamylase-like (also called glycogen 6-glucanohydrolase) proteins. E or "early" set domains are associated with the catalytic domain of isoamylase-like proteins at the N-terminal end. Isoamylase is one of the starch-debranching enzymes that catalyze the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminal domain of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase. This domain is also a member of the CBM48 (Carbohydrate Binding Module 48) family whose members include pullulanase, maltooligosyl trehalose synthase, starch branching enzyme, glycogen branching enzyme, glycogen debranching enzyme, and the beta subunit of AMP-activated protein kinase.	1.55288e-07
NZ_CP042816.1\|WP_044634469.1\|2363498_2364290_-\|PHP-domain-containing-protein	gnl\|CDD\|213994	cd12110, PHP_HisPPase_Hisj_like, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase of Hisj like. Bacillus subtilis YtvP HisJ has strong histidinol phosphate phosphatase (HisPPase) activity. The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to produce histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	5.5077e-51
NZ_CP042816.1\|WP_024751814.1\|2338208_2338937_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	2.32264e-142
NZ_CP042816.1\|WP_044634937.1\|2353552_2355283_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.22429e-130
NZ_CP042816.1\|WP_148879845.1\|2343151_2346427_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.8676e-09
NZ_CP042816.1\|WP_002695105.1\|2363224_2363506_-\|acylphosphatase	gnl\|CDD\|376373	pfam00708, Acylphosphatase, Acylphosphatase.	7.52551e-28

>NZ_CP042816.1|WP_148879846.1|2346881_2348063_+|IS630-family-transposase
MPKPPSKLELNPEELTYLESLVRLRTIQAQTLTRARILLLKSKGLSIKETADKVGYTYRSVALCLKKYKQGGVEHALTDAPGRGNNPEITDEEKSWIINLACQKPTTFGYAAETWTYALLTKHINTTAESAGYLRLATIHKTTVFKILTEADIKPYKIEYYCENRDPDFDRKMHNVLLVYKQLELYFEENKPLQTEEGKNIHVVSYDEKPGIQAIATTSDDLPADETHQCIRRDYEYKRLGTLSLLAGIDLQTGDAIPLVSDSHTSKDYVQFLKILDERYPQEDKIRIILDNLKVHTSKETIRYLSTVPGRFEFVFTPKHGSWLNMIEGFFSKLTRQLLRGMRVKSKTELVNRLYKYFDEINEEPVVFHWKYNLDDLDVSEAVITDALEYKLN
>NZ_CP042816.1|WP_148879041.1|2346569_2346785_+|hypothetical-protein
MLFKSKTFILTALKILHSLCKQVQTPVVPRRSDVLKQDYLQSFKTRRHNFATDGKTQNGHGCPWFQAAAMF
>NZ_CP042816.1|WP_148879845.1|2343151_2346427_+|tetratricopeptide-repeat-protein
MPSLQELKEFRDELKHIGNEPEVTADWGDLYDELPPPSEAPVPDVNVDDLLDSIGIDTDALLAAEQSAQSRNEDKKPEKEKRNLEAELVDIDLDDIGKDPAPVNPPSETGDALPEMDLTSDFFDSSDSDWKTHEIPETDVSLDVLDAPEEKTEIKELPEEPLSIPQSNFSDAADFDDLLSSLDLDEPMQDQNTEKEESFSDVPESLLAGLQDDLNTAKTESEDASLPEFDLGDFDFNSPEIDDLDIDKIGEAEALDLQEIEDAPLESADHNAFDIPASAFDEIPSSTDEKDSDTFPEDFLNLSLPAESDDGFSDNAFNLEDSLTLQPESGLKDDFTPDISALNAPPEENVDIESFTAPPEIDVENFTAQDQNQTDEHTGFAVEDNALDTSIEDINEGAFELPESFQSFAQESKLHDFRPLSHDDEEIDENAALSNDDYLYFLHRLESFPLNVRLIIQDYLANVPDSDAAKMNLIRMIVDDTSLKKVAAHLETILEKSVNIPKGFERKTAEEYEREKRTFSYRLKHRILPIATMSFLALLFAFCISVLSWQFIYKPIHSEILYKTGYTALESANYQAAISKFDEAGTYWKKRRWYFSFARGFRDKKQYLNAEKIYLRLLYDFKQDKEGGIEYAEMLSKDLRNYEKAETVLRRQVLDYHINDSDALIALGNLFLDWGDEDSSKYQEAEKIYQSLISMYGTKDPYLSGLMRYYIRTDNLAKVLPIQEILTDKNSMLVSDLIELGGYLLEKRYEPKPSDSEKLRAKIEDLRKLLDKALQAAPAEPEAYYNLGRFYIYNYKPAKAKDFLSEAIRLYQKSAHLTAGKTIKKINAMRLLGELLCDDKEYLDAHDLYAQALTEYQEYTAIRALPPHRIIGLLYSNYADIDYFISGNFDSALENYRSAVKELNNTPSIQYRIGFLEYKRDNYPAAIQAMSLAYAEKPDDKNLLYGFGTVLFKRGNYFAAQGYYNHLMELLDIERLRKGIMFPYTNKEDAAFIDEYMRTSNNFGVVLNRLAETNGDSQKNARAMALFAESSRAWDALTRNPDTMIRSKSASLAYLNIQNMVNSLSAYEPEVYADIPMTLQYEKVLQQKEDR
>NZ_CP042816.1|WP_002695094.1|2342219_2342930_-|hypothetical-protein
MKSIKLVFFLSAIFCAAAGFCSEQIEPLVYNSLVDSIHKAKEPSIQGKYIIFTANGSSRYAGIAFAHENYKKIYSFKKLNLETTGKTSNDPVLFFIMPIPEGMRQIRYRMVIDGLWTADPYNANQIYDYAEKMSVSILDVPFQKEYKTNVENGLTQFVYQGEAGQRISLAGTFNAWDPFMYVLKEISPGYYELYLPLPPGTWLYAFFKDGNQLPDIANSDHVYTVDGRTASVLQVK
>NZ_CP042816.1|WP_082048242.1|2341930_2342146_-|hypothetical-protein
MAPLTLRLFLRYFRRAKRIRLRTFEKVLAAPPIPHAQALCCITGFVSLPFKNTASDNPRNLHRADQAQSCE
>NZ_CP042816.1|WP_082048247.1|2340588_2341998_+|alpha-L-fucosidase
MLFYKTGEDFWRKIMEEPIMEKGVHAYSEEDRYVVPKSAAVRKHLEFFTGLKFGLMMHWAPGCQIATYESWPLCDDADDWSREDVIWTDDMEEFKHHYWNANKTFNPIKFRPDHWADFAKRAGFKYLLFTTKHHDGFCMFDTQQTDYKITASDCPFSSNKRANIVQEVFNAFRAEGLAISAYFSKPDWHSEYFWAPEMGKAETRNANYDIPSHPELWNKFVDFTHQQLREICSLYGHIDVLWLDGGQISPRIHNQDIRLGEIIEEIRNTTQPHLIVCDRTVGGEYENIITPEQSIPSHYIGCPWEACITAGDYFSFHYEDNFKSPHAIVRLLIEVVSKGGNLALNIPPQPDGQLPAKAMRNLLRVGEWLHIHGQAIYNTRGYPIAQEQKIFITEGSENVFVFYCYDENTPRLPRRVNIKLKDERAVQKITCLRSGAAVSFIQNGKILVIHTIELDPLGANYADCLKLCF
>NZ_CP042816.1|WP_024751815.1|2339728_2339977_-|30S-ribosomal-protein-S16
MSVKIRLKKFGSKKRPFYRIVVQDSREPRDGKTIEELGIYHPIAAEDKQIAFDSEKVRSWLDKGAEPTDTVRRLLNKKQFTL
>NZ_CP042816.1|WP_002697896.1|2339476_2339710_-|KH-domain-containing-protein
MDKDLVEYIAKSLVDDPSAVQVTRTEEENLVVLQLRVAENDVGKVIGKNGRIVKALRTLLSASAGNARTRYSLEILD
>NZ_CP042816.1|WP_002697897.1|2338933_2339458_-|16S-rRNA-processing-protein-RimM
MDLLVTAKIFGTFGVEGFVKISSFSGEYEHLLNLAEIRLRLPKSKTGKETQELLYTIEEIELRYTDALLKLEGIDSVEAAKKLVGSELLVPRDMACPLYEGEFYITDLCNSILVYQETPVGTITSVAEGGGGYVLEISEAETGLVKYVPFIKQFIGKVDIAQKRVELMHRWILE
>NZ_CP042816.1|WP_024751814.1|2338208_2338937_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRFDVLTLFPQIPQAFFDSSIMAKAVQKGIISYTLVNIRDFAHDKHKTCDDIPYGGGAGMLMLAEPLALALDSVQAKEKRVLYLSPSGKKFSQKTAEQLSKEESLVLICGRYEGIDQRIIDEYVDDEVCIGDYVMSSGELAALVVIDTIYRLIDGVISGESLEEESFTDGLLEYPQYTRPRVFRNREVPAVLLSGHHANIRRWRLEKRIEKTLKNRPDLLQVLQESGTMSQEAQIILKELIK
>NZ_CP042816.1|WP_024751819.1|2348869_2350375_-|IMP-dehydrogenase
MAFYYTEPSHTFNEYLLIPRYSSKEHSPQNVSLRTPLVRMKNGEEPQFTLNIPLVSAIMQSVSNDKTAIALAKEGGLSFIFGSQAIEKQAEMVSAVKNYKAGFVESDSNILPRQTLQDILDLKIKTGHTTVAVTEDGSAHGKLLGVVTGRDYRPSRMDRSLLVSEFMTPISKLTVGKEGISLAEANDLIWEYKLNSLPIVNEKGELVAFVFRKDYESKKENPNELLDEKKRYIVGAGINTRDYKERVPALIEAGADILCIDSSDGFSEWQKETIQFVKKQYNGRVPVGAGNIVDKDGFDFLADAGADFIKVGIGGGSICITRETKGIGRGQATALIEVAKARNEYYERTGVYIPICSDGGIVYDHHITLALAMGADFCMLGRYFARFDESPTNKVLVNGTYMKEYWGEGSSRARNWQRYDSGGDAKLAFEEGVDSYVPYAGPLHDNVQESMHKVKATMCNCGTLTIPELQKHAKLTLVSSASITEGGAHDVILKDIHANRT
>NZ_CP042816.1|WP_148879847.1|2351196_2351799_+|TetR-family-transcriptional-regulator
MCAKKRLPAEVRKKEIRDAAKKVFLQKGFSNTSMEDVIAEVGMSKGGVYRHYKSTAEMLHDLMTDGNHNRYNLIDDFLAKEKNISEPDVAIEVSLMKLLDKNDYKSLYAMFLMESEKNPDLKKLKNKFFNEGKKEFLRVVTQRDLKELECFISDEWVAFTNAIIVATEILDVRKVFCNHKDFFKDIIRQYMEKSQNKNNF
>NZ_CP042816.1|WP_148879848.1|2351837_2353553_+|ATP-binding-cassette-domain-containing-protein
MNLIKRYVQKNKGKYIASIFFAVVGVIMDLAAYIILSKIIAALITGSTDAGFYGKNILYILLVLVLKEIFAGTSTTISHTATFKSLKEIRKEIARKLFKMPLGDILNQSSGKLKNIIVDQVDHMETTLAHVIPEATANIVGPAILLIYMFILDWRLALLSLIPLIIGMLAIMSVMNESYKKNYKESVELGQNMNNAIVEYVGGVEVIKTFNQSETSYKKYSDAVYDNARFYYNWMKGCMMQVSIGRFISPMGLLTILPFGVFFYIRGTIALTALIQLIILSFGTVSGILKVMNFMDDLARVGTITGEIESILNARELSHSEESVSINNHTIEFTDVNFSYEKDKKVIDNLNLKINEGDVTAFVGPSGGGKSTIAKLIAGFWDTDAGEITIGGANLKEIPLSQLSDLISYVSQDNFLFDMSVLENIRIGNPNASDSEVKEIAKKSGCEKFILELENGYDTLVGEGGGHLSGGERQRISIARAMLKNAPIVILDEATSYIDPENESIMQEAIGNLVQNKTLIIIAHRLRTITDADKIFVIQGGHIESSGTHQELLEKSSLYSDMWNAAIKGDE
>NZ_CP042816.1|WP_044634937.1|2353552_2355283_+|ABC-transporter-ATP-binding-protein
MLTIFKKIWNFSKQEQSNIKFSLFFGFLNAVFNALQFAAIYYMLIKILQNEIAVIDIGIVSAIMLTSAVGKVLTQNKSQLQQTHAGYFMAAHKRISIGEKLKKVPMGFFSDFSLGKITTLATTSLSQIEIWVPLLLVLVLGGILNTVVFVLSLFFLNVTITAAAVVGIIGFFIVTSLMERKSRRNAHHVQEVQTALTKEVLSTVQGMQVIKSYNLDGENNKELDDSFERTHVLLLKLEKLMIPFTVIQRIVIGLTITCMLYLAVTMYISGTLTLAKTIMSMIASFIIFEGLLAAGSSMAVLRIAENAIDSLDYVNTIPDMEEGKDEKEISNSNIEFKNVSFSYDKKKILDDVSCVIKENTMTALVGPSGSGKTTFSQLIARFWDVNAGKITIGGKDIREYTLPNLMSNISYVFQNVYLFNDTIENNIKFGSPDASREEVIAAAKKACCHDFITALPNQYETIVGEGGAALSGGEKQRISIARAMLKNAPIIIFDEATANVDPENEDKLQTAIEALTKNKTVIMIAHRLKTVRNANQIIVLNDGKIEELGTHNQLMQKEGTYKKFIEARQSASSWKI
>NZ_CP042816.1|WP_044634936.1|2359003_2360266_-|hypothetical-protein
MRRNIVFVFGLLLSVFVFSCKNAEDSIAVIWTNNIDFVLYCELFNQSQKNYKIVVQYKTNPAQAVIEKTETFPDVVIGPWLKGGAARTEFTKIASVLGEDKIPEDSFYPELLQLGNINGNQYLLPVSFNLPTIIFSQKQANRIDSDFSLSLDEIRALSKEYNKIQNGIYTRMGFSPRWEDSFLYLTAEGFKASFEEKENFFTWNTQALSETVTYIRNWSAEVNTSAASEDDFKFRYLYDPPYMLITGGRCLFWYLPSDNLFAMSQDKLNNIDFRWITYKGKTPLQEDIVYAGIHKKARNTAAAKAFLIWFFSVDTQKELMEKIQEEHLIAQSFGIAGGFSALKNVTENVFPNYYPLLLKHLPQTNTFETPKILPSNWTQLKKAIVLPYLKEAGALPLGKSEENIQSLNKRSSEWYKNQQQ
>NZ_CP042816.1|WP_024752383.1|2360688_2360934_+|hypothetical-protein
MVPRSSDVLKQDYLQSFKTRRVCFATDGKIRTATDGGGSMQKRCFKARLFAKLLNSQGLFCHGWQNQNRHGRRWFHAETMF
>NZ_CP042816.1|WP_024752382.1|2361066_2362593_+|hypothetical-protein
MRQKKLNFFQWLIDKFFPQDDDEAFKRRMLKNIAKEISKNRYSRWYKQNTSDLLPAFGKVMYEIYKIVGPARSFLMTTLSSQVFKTITVEYFLSDKAHKLKDQLDQEFLLEQSKTLSVAAIEAEAKKKLAIISAEFTADKIQEIDLVYEHMDSFIHFVLYDYYFLLKKLDPTLPEGDFSYVPQFEPTNALFLLEDLKDFAVILYSLPLEINWSKLFEIITVYKNIRPVNETQWARLIKLLSDIRRSNIFEKIIQHISKDPTYKIESVPFNEKIAEAYFTRLKQTSEATIRKLQQEQKKAKMEYAAKNIFSDMSASGMKNYTSAANNAFKRRGLKGFTHTTEMDYLKIFLLDFFKADIRALSDLFLVRGNWGQQELSKNYSESYHTLMQICDKVLEFDENLSEGSDLGVKFRTLLSRSEREPGAAKQAMNLSEKVNDTAYKLLKISVKHLIVIGNNFKDIIADYDKPHRTLIQNWKEIEQHSDRPVKEWLTDAYKKIYNFVLLIRMSFN
>NZ_CP042816.1|WP_002695105.1|2363224_2363506_-|acylphosphatase
MPEKTFKAVHAFVYGRVQGVGFRYTTLNLARKMGVTGWVRNKADYSVEIFAEAPQPILADFFMALQSEHPYARVENIDIHVVPPQGFKSFTVR
>NZ_CP042816.1|WP_044634469.1|2363498_2364290_-|PHP-domain-containing-protein
MINNFHTHTFLCKHADGKAIDYALQAAEDGCSALGFSDHCPYPDGVWPDSRMEVDEIPFYKEMVEEARRAVDFPVYFGFECEWDPRYYSWYKDYLIDEVGAEYLVFGSHWYPMDGKFLYINNIRDKKIIGKYIDFTIQGMQSGLYKFLAHPDLFLASVEDVDKDYQACAEALIDAAIDLHMPLEINGYGLLKNTVQRTYGEDYGYPVKPFWEMARDKGAIIICNSDAHFPSHTISSCKKAFDYAEHLHIQPHDAAQVLNFSYA
>NZ_CP042816.1|WP_148879849.1|2365249_2366887_+|PQQ-binding-like-beta-propeller-repeat-protein
MKKKQGLKQIFFLIFFLFSCFSHAQENTAFWTLVLAGENLTNPVLHGQQIYTFSADKALNCFSTNGSFLWRRNVKISSKVFLHVSPAGIVYLIEKKGGTVHSFSAQGLPLHSYVLRSDIFFPPVCTKDGRVLFIAKNKLFCVTAQGNTLWTLSLSSPPIFVPAIMGGDDFLLITKNGYAYRISIFGEILHKQKIKGRVSALASIADGFIISTKDGVLARYKYNESAPVWKITETPCTAILAVGNFIYYLSKDGRITCRSAEGYKQIYSFVAATQFTQSVFCKVQGDELLVSDTGIAFTITKDGKIKWMQHMYDTAFTPVITENGLVVSAGGWIINAYRAEAKIISQKAQKFMPLGNFSILTKYNSLIPFSAQYFSTKEFFEEIEKALQSGTVGVKEAQYAKQLCTILKNASVAEYYPKTFTVDERAQAALLLGKLGSYEYRDILIFELQKTSDSRLAEGILRALATIEYDFDGKTFETIQMIINRFKGSNTAVMAAACQALFSIIKTAPKDIVQKAGGELFRIAEETPNSDVRKQARMLIDTLME

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP042816_6	6.1\|1588325\|59\|NZ_CP042816\|CRISPRCasFinder	1588325-1588383	59	NZ_CP042816.1	226123-226181	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	484660-484697	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	806668-806705	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1254870-1254907	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1402543-1402580	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1802792-1802829	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2501564-2501601	0	1.0
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	3149696-3149733	0	1.0
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	805431-805485	0	1.0
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	1046814-1046868	0	1.0
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2066481-2066535	0	1.0
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2081221-2081275	0	1.0
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2269852-2269906	0	1.0
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2612948-2613002	0	1.0
NZ_CP042816_5	5.1\|1402591\|38\|NZ_CP042816\|CRISPRCasFinder	1402591-1402628	38	NZ_CP042816.1	1242151-1242188	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	424157-424194	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	511107-511144	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	552271-552308	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	752771-752808	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	802553-802590	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	948655-948692	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1363112-1363149	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1363225-1363262	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1408336-1408373	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1408447-1408484	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1714376-1714413	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1756451-1756488	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2067059-2067096	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2131999-2132036	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2166012-2166049	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2269713-2269750	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2614494-2614531	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2758201-2758238	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2807418-2807455	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	3012156-3012193	1	0.974
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	3024996-3025033	1	0.974
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	427957-428011	1	0.982
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	474272-474326	1	0.982
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	1592672-1592726	1	0.982
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2181807-2181861	1	0.982
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2360582-2360636	1	0.982
NZ_CP042816_13	13.1\|2348750\|44\|NZ_CP042816\|CRISPRCasFinder	2348750-2348793	44	NZ_CP042816.1	794385-794428	1	0.977
NZ_CP042816_1	1.1\|230383\|40\|NZ_CP042816\|CRISPRCasFinder	230383-230422	40	NZ_CP042816.1	234053-234092	2	0.95
NZ_CP042816_3	3.1\|770951\|58\|NZ_CP042816\|CRISPRCasFinder	770951-771008	58	NZ_CP042816.1	905568-905625	2	0.966
NZ_CP042816_5	5.1\|1402591\|38\|NZ_CP042816\|CRISPRCasFinder	1402591-1402628	38	NZ_CP042816.1	2181842-2181879	2	0.947
NZ_CP042816_8	8.1\|1808701\|50\|NZ_CP042816\|CRISPRCasFinder	1808701-1808750	50	NZ_CP042816.1	1670747-1670796	2	0.96
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	154128-154165	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	211517-211554	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	376483-376520	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	442373-442410	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	699145-699182	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	752994-753031	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	812528-812565	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1216944-1216981	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	1234488-1234525	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2157105-2157142	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2262561-2262598	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2364631-2364668	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2459868-2459905	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2612837-2612874	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2740231-2740268	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2743982-2744019	2	0.947
NZ_CP042816_9	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	NZ_CP042816.1	2830317-2830354	2	0.947
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	340275-340329	2	0.964
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	1147646-1147700	2	0.964
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	1242169-1242223	2	0.964
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	1294961-1295015	2	0.964
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	1761196-1761250	2	0.964
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2066679-2066733	2	0.964
NZ_CP042816_11	11.1\|2269247\|55\|NZ_CP042816\|CRISPRCasFinder	2269247-2269301	55	NZ_CP042816.1	2600949-2601003	2	0.964

1. spacer 6.1|1588325|59|NZ_CP042816|CRISPRCasFinder matches to position: 226123-226181, mismatch: 0, identity: 1.0

cgcagcagcgacgttttaaagcaaagtaatttacaaagctttaaaactcgcaagtttgg	CRISPR spacer
cgcagcagcgacgttttaaagcaaagtaatttacaaagctttaaaactcgcaagtttgg	Protospacer
***********************************************************

2. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 484660-484697, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

3. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 806668-806705, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

4. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1254870-1254907, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

5. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1402543-1402580, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

6. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1802792-1802829, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

7. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2501564-2501601, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

8. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 3149696-3149733, mismatch: 0, identity: 1.0

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaagcaga	Protospacer
**************************************

9. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 805431-805485, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

10. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 1046814-1046868, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

11. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2066481-2066535, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

12. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2081221-2081275, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

13. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2269852-2269906, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

14. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2612948-2613002, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

15. spacer 5.1|1402591|38|NZ_CP042816|CRISPRCasFinder matches to position: 1242151-1242188, mismatch: 1, identity: 0.974

atggcaaaaactaaaccgtctgcttggaaccaccgcca	CRISPR spacer
atgtcaaaaactaaaccgtctgcttggaaccaccgcca	Protospacer
*** **********************************

16. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 424157-424194, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

17. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 511107-511144, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

18. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 552271-552308, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

19. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 752771-752808, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

20. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 802553-802590, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

21. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 948655-948692, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

22. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1363112-1363149, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

23. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1363225-1363262, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

24. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1408336-1408373, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

25. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1408447-1408484, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

26. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1714376-1714413, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

27. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1756451-1756488, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtagttccaagcaga	Protospacer
*************************.************

28. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2067059-2067096, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

29. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2131999-2132036, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

30. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2166012-2166049, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

31. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2269713-2269750, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

32. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2614494-2614531, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

33. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2758201-2758238, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

34. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2807418-2807455, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

35. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 3012156-3012193, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccacgcaga	Protospacer
******************************** *****

36. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 3024996-3025033, mismatch: 1, identity: 0.974

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

37. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 427957-428011, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

38. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 474272-474326, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

39. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 1592672-1592726, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

40. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2181807-2181861, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

41. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2360582-2360636, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

42. spacer 13.1|2348750|44|NZ_CP042816|CRISPRCasFinder matches to position: 794385-794428, mismatch: 1, identity: 0.977

cagaaccgccacggatggcggtggttccaagcagacggtttagt	CRISPR spacer
cagaaccgccacggacggcggtggttccaagcagacggtttagt	Protospacer
***************.****************************

43. spacer 1.1|230383|40|NZ_CP042816|CRISPRCasFinder matches to position: 234053-234092, mismatch: 2, identity: 0.95

gagctgtactgcaacaacaatcagctaaccacattgaacg	CRISPR spacer
gagttgtactgcaacaacaatcagctaaccacattaaacg	Protospacer
***.*******************************.****

44. spacer 3.1|770951|58|NZ_CP042816|CRISPRCasFinder matches to position: 905568-905625, mismatch: 2, identity: 0.966

actaaaccacgagttttaagagcacttggaaaaaatttgtgcttttaaaacatcgctg	CRISPR spacer
actaaaccacgagttttaaaagcacttggaaaaagtttgtgcttttaaaacatcgctg	Protospacer
*******************.**************.***********************

45. spacer 5.1|1402591|38|NZ_CP042816|CRISPRCasFinder matches to position: 2181842-2181879, mismatch: 2, identity: 0.947

atggcaaaaactaaaccgtctgcttggaaccaccgcca	CRISPR spacer
atggcaaaaactaaaccatctgcgtggaaccaccgcca	Protospacer
*****************.***** **************

46. spacer 8.1|1808701|50|NZ_CP042816|CRISPRCasFinder matches to position: 1670747-1670796, mismatch: 2, identity: 0.96

tgcctgatgcatttattctaaacaggcaaaactcgttggcgaagttacag	CRISPR spacer
tgcctgatgcatttattctaaacaggcaaaactcgtaggcgaagttaaag	Protospacer
************************************ ********** **

47. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 154128-154165, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcatggacgcccgtggttccacgcaga	Protospacer
**************.***************** *****

48. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 211517-211554, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcgcggacgcccgtggttccaaacaga	Protospacer
*************.*******************.****

49. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 376483-376520, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacaggcacggacgcccgtggttccaaacaga	Protospacer
*********.***********************.****

50. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 442373-442410, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttgcacgcaga	Protospacer
***************************** ** *****

51. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 699145-699182, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacagacgcccgtggttccaaacaga	Protospacer
***************.*****************.****

52. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 752994-753031, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
acacagaacgggcacggacgcccgtagttccaagcaga	Protospacer
** **********************.************

53. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 812528-812565, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggatgcccgtggttccacgcaga	Protospacer
******************.************* *****

54. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1216944-1216981, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacggcggtggttccaagcaga	Protospacer
******************** * ***************

55. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 1234488-1234525, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggtttcaaacaga	Protospacer
*****************************.***.****

56. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2157105-2157142, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacgaacgcccgtggttccaaacaga	Protospacer
****************.****************.****

57. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2262561-2262598, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtgattccacgcaga	Protospacer
**************************.***** *****

58. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2364631-2364668, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttcaaaacaga	Protospacer
****************************** **.****

59. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2459868-2459905, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtagttccatgcaga	Protospacer
*************************.****** *****

60. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2612837-2612874, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtgcttccatgcaga	Protospacer
************************** ***** *****

61. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2740231-2740268, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagcacgggcacggacgcccgtggttccatgcaga	Protospacer
****** ************************* *****

62. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2743982-2744019, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgagcacggacgcccgtggttccaaacaga	Protospacer
**********.**********************.****

63. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to position: 2830317-2830354, mismatch: 2, identity: 0.947

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttctaaacaga	Protospacer
******************************.**.****

64. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 340275-340329, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaacactaaaaatcagggcgtggcggtggttccaagcaga	Protospacer
******************.****************************** *****

65. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 1147646-1147700, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

66. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 1242169-1242223, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccaagcaga	Protospacer
******************************* ***************** *****

67. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 1294961-1295015, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

68. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 1761196-1761250, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cattgatttaatcaagaatactaaaaatcagggcgtggcggtggttccatgcaga	Protospacer
**.**********************************************.*****

69. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2066679-2066733, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

70. spacer 11.1|2269247|55|NZ_CP042816|CRISPRCasFinder matches to position: 2600949-2601003, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaagactaaaaatcaggacgtggcggtggttccacgcaga	Protospacer
****************** *************.**********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

80164 : 151461

Salicola_phage(12.5%)

transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044634762.1\|80164_81529_+\|tRNA	tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB	NA	NA	NA	NA
WP_002701293.1\|81678_81966_+	HPF/RaiA family ribosome-associated protein	NA	NA	NA	NA
WP_024752850.1\|82485_84888_-	VWA domain-containing protein	NA	NA	NA	NA
WP_024752851.1\|84921_87603_-	transcription elongation factor GreA	A0A248SJQ8	Salicola_phage	1.3e-07	27.1
WP_024752852.1\|87620_88568_-	hypothetical protein	NA	NA	NA	NA
WP_044634763.1\|89173_91576_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_002701312.1\|91983_92997_-	ketopantoate reductase family protein	NA	NA	NA	NA
WP_148878525.1\|93298_93418_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002701318.1\|93807_94506_+	hypothetical protein	NA	NA	NA	NA
WP_148878526.1\|94650_94863_+	hypothetical protein	NA	NA	NA	NA
WP_002701322.1\|95109_95736_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002701324.1\|95728_97096_+	MATE family efflux transporter	NA	NA	NA	NA
WP_039915987.1\|97169_97511_+	hypothetical protein	NA	NA	NA	NA
WP_039915994.1\|97702_99091_+	MATE family efflux transporter	NA	NA	NA	NA
WP_044634647.1\|99349_100246_-	hypothetical protein	NA	NA	NA	NA
WP_148879952.1\|100314_101952_-	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	8.5e-07	42.3
WP_024752858.1\|102252_103428_+	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_044634645.1\|103428_106518_+	exonuclease subunit SbcC	NA	NA	NA	NA
WP_024752862.1\|107252_107438_-	hypothetical protein	NA	NA	NA	NA
WP_024752863.1\|107779_109435_+	ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	3.1e-49	27.7
WP_052335749.1\|110167_111421_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_024752864.1\|111534_112005_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_024752865.1\|112195_113557_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	8.9e-18	27.9
WP_024752866.1\|113559_114330_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_024752867.1\|114311_115061_+	UDP-N-acetyl-D-mannosamine transferase	NA	NA	NA	NA
WP_024752868.1\|115827_116955_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_002700578.1\|116941_117664_-	rRNA methylase	NA	NA	NA	NA
WP_002700580.1\|117920_118466_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_148879331.1\|118587_118869_+	hypothetical protein	NA	NA	NA	NA
WP_024752871.1\|119083_120262_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002700584.1\|120447_121131_-	hypothetical protein	NA	NA	NA	NA
WP_148879330.1\|121708_122305_+	hypothetical protein	NA	NA	NA	NA
WP_002700592.1\|122350_123139_+	RNA polymerase sigma factor WhiG	I1ZBD5	Salisaeta_icosahedral_phage	9.8e-09	30.6
WP_148879329.1\|123149_125117_+	DUF342 domain-containing protein	NA	NA	NA	NA
WP_024752873.1\|125097_125439_+	hypothetical protein	NA	NA	NA	NA
WP_002700598.1\|125443_126037_+	hypothetical protein	NA	NA	NA	NA
WP_052335659.1\|126792_128046_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_044634707.1\|128676_130875_-	AAA family ATPase	G3MBE0	Bacillus_virus	7.2e-102	46.6
WP_148879498.1\|130867_131875_-	hypothetical protein	NA	NA	NA	NA
WP_024752876.1\|131886_132564_-	hypothetical protein	NA	NA	NA	NA
WP_024752877.1\|132730_133612_+	bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.1e-29	35.1
WP_081718764.1\|133584_134439_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_081718765.1\|134536_134806_+	hypothetical protein	NA	NA	NA	NA
WP_024752878.1\|134880_135663_-	TdeIII family type II restriction endonuclease	NA	NA	NA	NA
WP_148879326.1\|135664_137272_-	site-specific DNA-methyltransferase	NA	NA	NA	NA
WP_148879327.1\|137402_138092_-	hypothetical protein	NA	NA	NA	NA
WP_024752881.1\|138102_138801_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_148878577.1\|139488_140742_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_148879499.1\|141239_141437_+	hypothetical protein	NA	NA	NA	NA
WP_024752883.1\|141759_142881_+	hypothetical protein	NA	NA	NA	NA
WP_024752884.1\|142867_143641_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_044634710.1\|143661_144204_+	signal peptidase II	NA	NA	NA	NA
WP_024752886.1\|144193_144466_+	hypothetical protein	NA	NA	NA	NA
WP_024752887.1\|144920_146546_-	hypothetical protein	NA	NA	NA	NA
WP_024752888.1\|146956_147790_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_002700602.1\|147903_148128_+	hypothetical protein	NA	NA	NA	NA
WP_024752889.1\|148188_148749_-	hypothetical protein	NA	NA	NA	NA
WP_148879500.1\|148982_150236_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_148879501.1\|150283_151159_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.8e-33	35.4
WP_024752891.1\|151143_151461_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

240361 : 250185

Campylobacter_phage(11.11%)

portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148879532.1\|240361_241381_+	modification methylase	A0A1B0XVT8	Campylobacter_phage	6.4e-37	44.8
WP_024751666.1\|241580_241979_+	single-stranded DNA-binding protein	E5DV85	Deep-sea_thermophilic_phage	1.4e-16	41.4
WP_148879533.1\|241991_242351_+	hypothetical protein	NA	NA	NA	NA
WP_044634232.1\|242686_242878_+	hypothetical protein	NA	NA	NA	NA
WP_148878754.1\|242874_243672_+	hypothetical protein	NA	NA	NA	NA
WP_148878755.1\|243780_245376_+	hypothetical protein	S5MBV8	Brevibacillus_phage	5.3e-70	35.6
WP_148878756.1\|245408_247181_+\|portal	phage portal protein	F8WPY2	Bacillus_phage	7.0e-39	29.6
WP_081718581.1\|247194_247524_+	hypothetical protein	D2ECI8	Treponema_phage	2.7e-05	64.9
WP_148879534.1\|247618_248359_+	oxidoreductase	A0A139ZPI9	Marinitoga_camini_virus	3.6e-37	42.2
WP_148879535.1\|248355_249234_+	DNA adenine methylase	A0A0H3UZK1	Geobacillus_virus	5.6e-29	32.8
WP_024751735.1\|249230_249560_+	DUF4406 domain-containing protein	A0A1B0YZW9	Pseudomonas_phage	9.4e-14	41.5
WP_024751714.1\|249556_249838_+	hypothetical protein	NA	NA	NA	NA
WP_082048203.1\|249921_250185_+	DUF1064 domain-containing protein	B0VK09	Azospirillum_phage	4.0e-07	46.5

DBSCAN-SWA_3

628850 : 698957

uncultured_Caudovirales_phage(31.58%)

integrase,protease,transposase

attL 628755:628814|attR 668043:669347

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
628755:628814	attL	NA	NA	NA	NA
WP_024752136.1\|628850_630044_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_148879591.1\|630214_632209_-	RecQ family ATP-dependent DNA helicase	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	4.2e-40	30.3
WP_148879592.1\|632210_633212_-	hypothetical protein	NA	NA	NA	NA
WP_044634789.1\|633397_634273_-	hypothetical protein	NA	NA	NA	NA
WP_044634788.1\|634272_634713_-	hypothetical protein	NA	NA	NA	NA
WP_148879593.1\|634841_636695_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-07	32.6
WP_024752137.1\|636936_637833_-	site-specific DNA-methyltransferase	A0A1D8KJW7	Synechococcus_phage	6.5e-41	44.3
WP_039943402.1\|637825_638692_-	hypothetical protein	NA	NA	NA	NA
WP_044634789.1\|638911_639787_-	hypothetical protein	NA	NA	NA	NA
WP_044634788.1\|639786_640227_-	hypothetical protein	NA	NA	NA	NA
WP_148879591.1\|640385_642380_-	RecQ family ATP-dependent DNA helicase	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	4.2e-40	30.3
WP_148879592.1\|642381_643383_-	hypothetical protein	NA	NA	NA	NA
WP_024752137.1\|643525_644422_-	site-specific DNA-methyltransferase	A0A1D8KJW7	Synechococcus_phage	6.5e-41	44.3
WP_039943402.1\|644414_645281_-	hypothetical protein	NA	NA	NA	NA
WP_148879231.1\|645464_647270_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-07	32.6
WP_148879222.1\|647546_648314_-	hypothetical protein	A0A2R2ZH57	Clostridioides_phage	1.2e-30	35.3
WP_148879221.1\|648373_648964_-	hypothetical protein	NA	NA	NA	NA
WP_148879220.1\|649088_651194_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	9.9e-08	37.7
WP_024752142.1\|652342_653176_-	hypothetical protein	NA	NA	NA	NA
WP_024752143.1\|653169_653838_-	hypothetical protein	NA	NA	NA	NA
WP_024752144.1\|653909_654491_-	hypothetical protein	NA	NA	NA	NA
WP_024752145.1\|654475_655054_-	hypothetical protein	NA	NA	NA	NA
WP_148879957.1\|655484_656027_-	hypothetical protein	R4THJ7	Phaeocystis_globosa_virus	7.9e-26	45.0
WP_024752139.1\|656445_657591_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_148879958.1\|657786_659430_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-07	32.6
WP_148879594.1\|659996_660947_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BUR2	Microcystis_phage	2.1e-21	32.9
WP_148879595.1\|661116_662202_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_148879596.1\|662343_663366_-	restriction endonuclease subunit M	A0A1B0XVT8	Campylobacter_phage	2.1e-35	45.5
WP_148879959.1\|663518_663875_-	hypothetical protein	NA	NA	NA	NA
WP_148879597.1\|664582_665848_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	6.1e-61	40.2
WP_148879960.1\|666136_667780_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-07	33.3
WP_024752136.1\|668138_669332_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_148879214.1\|669332_670286_+	Fic family protein	NA	NA	NA	NA
668043:669347	attR	NA	NA	NA	NA
WP_044634957.1\|670505_671654_-	Fic family protein	D7RWK9	Brochothrix_phage	5.0e-38	31.8
WP_148879598.1\|672335_676487_+	TIGR02680 family protein	NA	NA	NA	NA
WP_148879212.1\|676709_678596_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.0e-105	35.4
WP_002699611.1\|678801_679020_-	hypothetical protein	NA	NA	NA	NA
WP_024752158.1\|679317_679683_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024752159.1\|680002_681292_+	DUF2399 domain-containing protein	NA	NA	NA	NA
WP_024752160.1\|681603_682239_+	hypothetical protein	NA	NA	NA	NA
WP_148879599.1\|682235_685772_+	hypothetical protein	NA	NA	NA	NA
WP_024751992.1\|685899_686916_-\|transposase	IS5 family transposase	Q38213	Escherichia_phage	9.0e-23	30.3
WP_081718667.1\|687319_687562_-	hypothetical protein	NA	NA	NA	NA
WP_148878912.1\|687622_688819_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_148879396.1\|689033_690338_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_148878573.1\|690646_691150_-	hypothetical protein	NA	NA	NA	NA
WP_148879600.1\|691190_693437_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	4.0e-07	50.0
WP_024752166.1\|694956_696738_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	9.0e-111	37.3
WP_039943445.1\|696851_697580_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_024752168.1\|697928_698957_+\|protease	omptin family outer membrane protease	NA	NA	NA	NA

DBSCAN-SWA_4

1206134 : 1272615

Brevibacillus_phage(12.5%)

integrase,protease,transposase,tRNA

attL 1201610:1201625|attR 1232867:1232882

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1201610:1201625	attL	NA	NA	NA	NA
WP_148878807.1\|1206134_1207058_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	1.6e-26	30.2
WP_024753359.1\|1207089_1207632_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_044634343.1\|1207631_1209047_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	3.6e-38	27.5
WP_148879671.1\|1208970_1209183_-	hypothetical protein	NA	NA	NA	NA
WP_002695188.1\|1209555_1209966_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_024753361.1\|1209988_1210447_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_002695192.1\|1210475_1210844_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_024753362.1\|1210943_1212647_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_024753363.1\|1212648_1213710_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_002695197.1\|1213759_1214689_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_024753364.1\|1214703_1216140_+	flagellar protein export ATPase FliI	NA	NA	NA	NA
WP_024753365.1\|1216146_1216590_+	flagellar export protein FliJ	NA	NA	NA	NA
WP_081718819.1\|1216938_1217130_-	hypothetical protein	NA	NA	NA	NA
WP_024753366.1\|1217237_1218407_+	type III PLP-dependent enzyme	NA	NA	NA	NA
WP_148878810.1\|1219007_1219193_-	hypothetical protein	NA	NA	NA	NA
WP_024753367.1\|1219402_1219813_-	hypothetical protein	NA	NA	NA	NA
WP_024753368.1\|1219823_1220954_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002695719.1\|1221043_1222210_+	DEAD/DEAH box helicase	E3T5E1	Cafeteria_roenbergensis_virus	4.9e-41	29.5
WP_024753369.1\|1222206_1223907_-	hypothetical protein	NA	NA	NA	NA
WP_052335785.1\|1223916_1225509_-	hypothetical protein	NA	NA	NA	NA
WP_024753371.1\|1225516_1226650_-	glycosyltransferase	NA	NA	NA	NA
WP_024753373.1\|1227002_1227740_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_002695738.1\|1230264_1230633_+	DUF1667 domain-containing protein	NA	NA	NA	NA
WP_024753376.1\|1230629_1232189_+	carbohydrate kinase	NA	NA	NA	NA
WP_024753377.1\|1232235_1233999_+	FAD-binding oxidoreductase	NA	NA	NA	NA
1232867:1232882	attR	NA	NA	NA	NA
WP_148879965.1\|1234470_1234662_+	hypothetical protein	NA	NA	NA	NA
WP_024753378.1\|1234768_1235221_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_002697877.1\|1235217_1235829_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002697870.1\|1236305_1237346_-	hypothetical protein	NA	NA	NA	NA
WP_024753379.1\|1237917_1238667_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_002697862.1\|1238786_1238957_-	hypothetical protein	NA	NA	NA	NA
WP_024753380.1\|1239427_1240624_+	amidohydrolase	NA	NA	NA	NA
WP_002697855.1\|1240620_1241445_+	DUF3100 domain-containing protein	NA	NA	NA	NA
WP_002697854.1\|1241434_1241881_+	hypothetical protein	NA	NA	NA	NA
WP_039914746.1\|1242805_1244056_-	radical SAM protein	NA	NA	NA	NA
WP_002697846.1\|1244119_1245022_-	radical SAM protein	NA	NA	NA	NA
WP_052335749.1\|1245475_1246729_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_024753383.1\|1247929_1248346_-	YjbQ family protein	NA	NA	NA	NA
WP_148879672.1\|1248406_1249615_-	hypothetical protein	NA	NA	NA	NA
WP_002697839.1\|1250093_1251965_-	hypothetical protein	NA	NA	NA	NA
WP_024753385.1\|1252092_1254672_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.0e-91	31.2
WP_002695817.1\|1255221_1256157_+	ribokinase	NA	NA	NA	NA
WP_148879673.1\|1256153_1256855_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_024753388.1\|1257211_1258240_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.1e-65	42.5
WP_044634354.1\|1258460_1259789_-	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_148878815.1\|1259880_1261038_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.1e-08	30.3
WP_024753391.1\|1261079_1261577_-	hypothetical protein	NA	NA	NA	NA
WP_148879674.1\|1263049_1264303_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_081718823.1\|1264758_1265079_-	hypothetical protein	NA	NA	NA	NA
WP_002699885.1\|1265276_1265963_+	DNA repair protein RadC	NA	NA	NA	NA
WP_002699887.1\|1266018_1268274_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_002699889.1\|1268270_1269104_-	carbon monoxide dehydrogenase	NA	NA	NA	NA
WP_148879675.1\|1269103_1269565_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	1.0e-18	35.8
WP_148879676.1\|1270107_1270986_-	hypothetical protein	NA	NA	NA	NA
WP_002699896.1\|1271394_1272615_+\|protease	trypsin-like serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	4.7e-26	30.5

DBSCAN-SWA_5

1781834 : 1845932

Staphylococcus_phage(20.0%)

protease,coat,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148879765.1\|1781834_1784420_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	3.4e-268	55.3
WP_148879766.1\|1784492_1784735_+	hypothetical protein	NA	NA	NA	NA
WP_148879048.1\|1784762_1785992_+\|coat	spore coat protein	NA	NA	NA	NA
WP_002700544.1\|1786022_1786442_+	J domain-containing protein	NA	NA	NA	NA
WP_024752405.1\|1786443_1788396_+	hypothetical protein	NA	NA	NA	NA
WP_002700547.1\|1788392_1789580_+	DNA polymerase IV	A0A290GHP0	Caldibacillus_phage	2.4e-11	25.8
WP_148879767.1\|1789754_1795304_+	hypothetical protein	NA	NA	NA	NA
WP_024752403.1\|1795320_1797654_+	penicillin-binding protein 1C	NA	NA	NA	NA
WP_002700565.1\|1798120_1798885_+	ParA family protein	Q8JL10	Natrialba_phage	3.1e-20	26.9
WP_024752402.1\|1798868_1799780_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.5e-16	35.8
WP_148879768.1\|1799833_1800349_+	transcriptional repressor	NA	NA	NA	NA
WP_044634962.1\|1800955_1802008_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_148879425.1\|1803243_1804140_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_024752400.1\|1804136_1805432_+	lytic transglycosylase domain-containing protein	C1KFN7	Lactobacillus_virus	5.2e-07	31.2
WP_002695130.1\|1805520_1806834_+	OmpA family protein	NA	NA	NA	NA
WP_024752398.1\|1807685_1808456_+	ComF family protein	NA	NA	NA	NA
WP_044634961.1\|1809235_1810162_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_081718726.1\|1811231_1812908_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_148878890.1\|1813005_1815213_+	glycoside hydrolase family 95 protein	NA	NA	NA	NA
WP_148878912.1\|1815561_1816758_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_024752393.1\|1817236_1818565_-	ATP-binding protein	NA	NA	NA	NA
WP_024752392.1\|1819240_1819894_+	response regulator transcription factor	NA	NA	NA	NA
WP_044634654.1\|1820008_1820692_+	serine/threonine protein phosphatase	NA	NA	NA	NA
WP_024752390.1\|1821094_1821967_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_024752389.1\|1822430_1823933_-	NADPH-dependent glutamate synthase	A0A249XZT7	Enterococcus_phage	7.1e-08	26.3
WP_002699093.1\|1823978_1824812_-	sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA	NA	NA	NA
WP_002699091.1\|1824923_1825517_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.1e-31	38.9
WP_148879769.1\|1827515_1828769_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_148879770.1\|1830932_1831871_+	AEC family transporter	NA	NA	NA	NA
WP_002699078.1\|1832357_1832735_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002699076.1\|1832747_1833614_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-18	30.1
WP_024751880.1\|1833615_1834311_+	hypothetical protein	NA	NA	NA	NA
WP_148878990.1\|1834775_1835102_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_024751882.1\|1835062_1835314_-	hypothetical protein	NA	NA	NA	NA
WP_044634652.1\|1835631_1836426_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.6e-43	36.5
WP_002698290.1\|1836422_1837709_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-90	45.9
WP_024751884.1\|1837727_1838309_-	hypothetical protein	NA	NA	NA	NA
WP_024751886.1\|1839184_1839934_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	NA	NA	NA
WP_044634651.1\|1840353_1840998_-	DUF3160 domain-containing protein	NA	NA	NA	NA
WP_148879429.1\|1840939_1841038_-	DUF3160 domain-containing protein	NA	NA	NA	NA
WP_148879771.1\|1841062_1842226_-	DUF3160 domain-containing protein	NA	NA	NA	NA
WP_024751890.1\|1843090_1843474_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_024751891.1\|1843518_1844148_-	adenylate kinase	NA	NA	NA	NA
WP_148879772.1\|1844840_1845932_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1914668 : 1925980

Clostridium_phage(11.11%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148879785.1\|1914668_1916285_-	hypothetical protein	A0A0A8WIZ2	Clostridium_phage	5.4e-30	32.8
WP_002695934.1\|1916281_1916665_-	hypothetical protein	NA	NA	NA	NA
WP_148879786.1\|1916667_1918161_-	hypothetical protein	NA	NA	NA	NA
WP_148879787.1\|1918188_1919652_-	DNA-packaging protein	A0A0K1LMR9	Caulobacter_phage	3.0e-51	32.7
WP_148879788.1\|1919629_1920232_-	hypothetical protein	NA	NA	NA	NA
WP_148879789.1\|1920816_1921341_-	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	3.9e-06	26.8
WP_081718583.1\|1921429_1921693_-	DUF1064 domain-containing protein	B8Q5A6	Abalone_shriveling_syndrome-associated_virus	2.3e-07	46.3
WP_024751734.1\|1921776_1922058_-	hypothetical protein	NA	NA	NA	NA
WP_024751735.1\|1922054_1922384_-	DUF4406 domain-containing protein	A0A1B0YZW9	Pseudomonas_phage	9.4e-14	41.5
WP_148879073.1\|1922487_1923309_-	oxidoreductase	A0A139ZPI9	Marinitoga_camini_virus	2.3e-37	42.1
WP_081718571.1\|1923403_1923745_-	hypothetical protein	D2ECI8	Treponema_phage	2.8e-05	64.9
WP_044634724.1\|1923772_1924276_-	hypothetical protein	NA	NA	NA	NA
WP_148879973.1\|1924497_1925184_-	site-specific DNA-methyltransferase	A0A1P8CMS8	Staphylococcus_phage	1.0e-33	35.2
WP_024751628.1\|1925191_1925980_-	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	2.8e-11	25.7

DBSCAN-SWA_7

2748860 : 2757629

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024753051.1\|2748860_2749739_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.1e-08	26.4
WP_024753050.1\|2749731_2750394_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-07	26.7
WP_044634514.1\|2750513_2752247_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.8e-34	26.3
WP_044634515.1\|2752243_2753929_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.6e-38	28.2
WP_024753047.1\|2754102_2755836_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-35	28.8
WP_044634516.1\|2755832_2757629_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.0e-25	23.5

DBSCAN-SWA_8

2761399 : 2808329

Lactobacillus_phage(33.33%)

integrase,transposase,tRNA

attL 2769339:2769385|attR 2808330:2808376

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024753043.1\|2761399_2763118_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_148879206.1\|2763795_2764194_-	DUF1284 domain-containing protein	NA	NA	NA	NA
WP_024753041.1\|2764193_2764700_-	META domain-containing protein	NA	NA	NA	NA
WP_002698206.1\|2764913_2765351_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_024753040.1\|2765600_2766692_-	nickel/cobalt transporter	NA	NA	NA	NA
WP_002698199.1\|2767445_2768225_+	TSUP family transporter	NA	NA	NA	NA
WP_148879898.1\|2768250_2769024_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
2769339:2769385	attL	NA	NA	NA	NA
WP_148879899.1\|2769385_2769733_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6J1X2	Lactobacillus_phage	2.5e-09	40.4
WP_148879205.1\|2769943_2770231_+	hypothetical protein	NA	NA	NA	NA
WP_024753037.1\|2770239_2770506_-	hypothetical protein	NA	NA	NA	NA
WP_081718783.1\|2771137_2771989_+	hypothetical protein	NA	NA	NA	NA
WP_024753035.1\|2772569_2773166_+	cytidylate kinase-like family protein	NA	NA	NA	NA
WP_148879900.1\|2773362_2774436_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_044634518.1\|2774504_2775446_-	transketolase	NA	NA	NA	NA
WP_148879901.1\|2775442_2776273_-	transketolase	G9E5U1	Micromonas_pusilla_virus	3.2e-10	33.3
WP_024753032.1\|2776480_2777749_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_024753031.1\|2777833_2778118_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_024753030.1\|2778834_2779491_-	hypothetical protein	NA	NA	NA	NA
WP_024753029.1\|2779492_2780218_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_024753028.1\|2780219_2780771_-	biotin transporter BioY	NA	NA	NA	NA
WP_044634522.1\|2781788_2782895_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_044634523.1\|2783342_2784425_-	6-phosphofructokinase	NA	NA	NA	NA
WP_148879902.1\|2784447_2786535_+	hypothetical protein	NA	NA	NA	NA
WP_024753023.1\|2786590_2787214_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.8e-29	40.1
WP_024753022.1\|2787213_2788860_-	iron ABC transporter permease	NA	NA	NA	NA
WP_024753021.1\|2788874_2789894_-	thiamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002699538.1\|2790364_2791330_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_148879903.1\|2791360_2792389_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_002699534.1\|2792439_2793489_-	hypothetical protein	NA	NA	NA	NA
WP_024753017.1\|2793698_2794313_+	hypothetical protein	NA	NA	NA	NA
WP_002699530.1\|2794353_2794635_+	hypothetical protein	NA	NA	NA	NA
WP_148879397.1\|2794719_2794896_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_024753016.1\|2794892_2795330_-	hypothetical protein	NA	NA	NA	NA
WP_148879904.1\|2795494_2796748_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_002696721.1\|2796872_2797073_-	hypothetical protein	NA	NA	NA	NA
WP_024753013.1\|2797190_2797415_+	hypothetical protein	NA	NA	NA	NA
WP_148879905.1\|2797625_2798198_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_148878579.1\|2798145_2798268_-\|transposase	transposase	NA	NA	NA	NA
WP_148879906.1\|2798450_2800496_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.1e-06	32.1
WP_148879907.1\|2800870_2804287_-	UvrD-helicase domain-containing protein	A0A068EQC7	Bacillus_phage	1.2e-15	23.1
WP_148878580.1\|2804286_2807058_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_024752184.1\|2807588_2807870_+\|transposase	transposase	NA	NA	NA	NA
WP_047170260.1\|2807981_2808329_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6J1X2	Lactobacillus_phage	4.3e-09	43.4
2808330:2808376	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3028670 : 3087473

Macacine_betaherpesvirus(18.18%)

integrase,transposase,tRNA

attL 3036665:3036724|attR 3087556:3087626

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002700233.1\|3028670_3030560_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_024751843.1\|3031295_3033620_-\|tRNA	methionine--tRNA ligase	A0A2K9KZR3	Tupanvirus	5.5e-116	42.9
WP_044634922.1\|3033829_3034111_+	hypothetical protein	NA	NA	NA	NA
WP_081718609.1\|3034065_3034269_+	hypothetical protein	NA	NA	NA	NA
WP_024751842.1\|3034292_3035435_-	cysteine desulfurase	H7BUW1	unidentified_phage	5.6e-21	34.3
WP_024751841.1\|3035496_3036252_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
3036665:3036724	attL	NA	NA	NA	NA
WP_148879931.1\|3036958_3039178_-	leucine-rich repeat protein	NA	NA	NA	NA
WP_148879932.1\|3039455_3039947_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2I6AZV9	Macacine_betaherpesvirus	2.3e-16	43.9
WP_024751837.1\|3040108_3040876_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_148879984.1\|3041800_3044965_-	DEAD/DEAH box helicase family protein	A0A2K5B2C2	Erysipelothrix_phage	1.4e-125	32.6
WP_148879985.1\|3044988_3046887_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	1.6e-105	42.8
WP_148878685.1\|3046948_3047176_-	hypothetical protein	NA	NA	NA	NA
WP_044634428.1\|3047678_3049058_+	tryptophanase	NA	NA	NA	NA
WP_148879933.1\|3049166_3050489_+	sodium-dependent transporter	NA	NA	NA	NA
WP_002700688.1\|3050601_3051333_-	endonuclease III	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	3.7e-18	31.4
WP_148879986.1\|3051614_3052184_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_002700690.1\|3052642_3053317_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.8e-36	41.6
WP_024751829.1\|3053364_3053646_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_148878683.1\|3053729_3054878_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_024751828.1\|3054900_3055707_+	TrmH family RNA methyltransferase	NA	NA	NA	NA
WP_024751827.1\|3056104_3056860_+	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_024751826.1\|3056899_3057676_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_002700699.1\|3057827_3057989_+	rubredoxin	NA	NA	NA	NA
WP_148879404.1\|3058026_3058314_+	hypothetical protein	NA	NA	NA	NA
WP_148879934.1\|3058632_3060381_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.3e-08	35.5
WP_148878677.1\|3060454_3060655_-	hypothetical protein	NA	NA	NA	NA
WP_024751767.1\|3060808_3062110_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_024751766.1\|3062106_3063363_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002696846.1\|3064144_3064777_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_024751764.1\|3064769_3065795_+	sugar kinase	NA	NA	NA	NA
WP_148879935.1\|3065893_3068494_+	hypothetical protein	NA	NA	NA	NA
WP_024751762.1\|3069205_3069556_-	hypothetical protein	NA	NA	NA	NA
WP_148878730.1\|3069822_3070797_+	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	8.1e-05	36.8
WP_024751760.1\|3070793_3071768_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_024751759.1\|3071922_3072429_+	hypothetical protein	NA	NA	NA	NA
WP_148879936.1\|3072440_3074009_+	hypothetical protein	NA	NA	NA	NA
WP_002696392.1\|3074266_3075556_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_024751757.1\|3075583_3076447_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_024751756.1\|3076469_3077294_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_052335749.1\|3077443_3078697_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_002696386.1\|3079251_3080721_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_002696384.1\|3080739_3081288_-	antiterminator LoaP	NA	NA	NA	NA
WP_148878732.1\|3081550_3081754_+	hypothetical protein	NA	NA	NA	NA
WP_148879937.1\|3082111_3082987_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.3e-33	35.4
WP_024752891.1\|3082971_3083289_-\|transposase	transposase	NA	NA	NA	NA
WP_148879938.1\|3083890_3084541_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024752898.1\|3084952_3085315_+	hypothetical protein	NA	NA	NA	NA
WP_148879939.1\|3085498_3086128_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.9e-29	38.8
WP_024752896.1\|3087191_3087473_-\|transposase	transposase	NA	NA	NA	NA
3087556:3087626	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP042816.1|WP_002699530.1|2794353_2794635_+|hypothetical-protein

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Acr_ID: NZ_CP042816.1|WP_024753016.1|2794892_2795330_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP042816.1|WP_002699530.1|2794353_2794635_+|hypothetical-protein

2794353_2794635_+

93 aa aa

2761399-2808329

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP042816_9	Orphan	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	2807455-2807418	1

1. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to NZ_CP042816 position: 2807455-2807418, mismatch: 1

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

NZ_CP042816.1|WP_024753016.1|2794892_2795330_-|hypothetical-protein

2794892_2795330_-

145 aa aa

2761399-2808329

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP042816_9	Orphan	9.1\|1965101\|38\|NZ_CP042816\|CRISPRCasFinder	1965101-1965138	38	2807455-2807418	1

1. spacer 9.1|1965101|38|NZ_CP042816|CRISPRCasFinder matches to NZ_CP042816 position: 2807455-2807418, mismatch: 1

actcagaacgggcacggacgcccgtggttccaagcaga	CRISPR spacer
actcagaacgggcacggacgcccgtggttccaaacaga	Protospacer
*********************************.****

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042816

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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