CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043222	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT chromosome, complete genome	2 crisprs	DEDDh,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,DinG	2	29	10	1
NZ_CP043223	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence	0 crisprs	csa3	0	0	1	0
NZ_CP043224	Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.2-IncN, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043222_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043222_1

2373543-2374852

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTNTTCCCCGCGCCAGCGGGGATAAACCG	CRT

21 spacers

cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of NZ_CP043222_1

>merge|NZ_CP043222|1|2373543-2374852|PILER-CR,CRISPRCasFinder,CRT
GTATTCCCCGCGCCAGCGGGGATAAACCGCCCGGTTTTACCGCCAACACTCACTATATTGTGTATTCCCCGCGCCAGCGGGGATAAACCGCGGCTCGACCGGGAGCTTGCCGGCATCGTGGAGTATTCCCCGCGCCAGCGGGGATAAACCGCAATCATCTGATTTTTTATCATTGAGAGATATGTATTCCCCGCGCCAGCGGGGATAAACCGGCAACTTCTTATATGTAAAAAACCGTTATGATGTATTCCCCGCGCCAGCGGGGATAAACCGTCCGGGGAAAGAACTCGCCTCGTCCAGCGTCAGTATTCCCCGCGCCAGCGGGGATAAACCGGCAATATGAATAACAACGTACCACTCATCGCAGTATTCCCCGCGCCAGCGGGGATAAACCGGAGCACTTTTACTGTAGGACTTGTATGAATCTGTATTCCCCGCGCCAGCGGGGATAAACCGCGGCCGTAGCGCCGCTCAGTCCGGGGGATGGTGTATTCCCCGCACCAGCGGGGATAAACCGCAATTGCGTTCTTGCTTATGCCCAGCGACTTAGTGTTCCCCGCGTCAGCGGGGATAAACCGATTTCAAACACTCCGGGTCTGCCAGCGCCTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCGGCGGACGCCGCTCAGATAGCCAAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGTATACAGGATTCTCACACTTTGGTTTGGTCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTTTTTTATTTGTACTATTGTCAGTACCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGAAACAAACAAAGTTTTGCGCGATTCCACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCACCAGGTAACAATATCGTCCCCGACCTTTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAAATTCCCCAGATACCGCGCATCGGCACTGTGTTCCCCGCGTCAGCGGGGATAAACCGCAAAATTAATGTCCAGGACCTTATTAAGTTACGTGTTCCCCGCGTCAGCGGGGATAAACCGCTCGGGGATTTTGTGCCACCCAAAACGCTCGCGTGTTCCCCGCGTCAGCGGGGATAAACCGTTGCCACAACCACAATGGATCAGGAGCAATTAGTGTTCCCCGCGTCAGCGGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCTAGCGGGGATAAACCGCCGGATGAAAACGCCTACCCGGAAGACTACGAGTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP043222|1|1|2373543-2374791|PILER-CR
GTATTCCCCGCGCCAGCGGGGATAAACCG	CCCGGTTTTACCGCCAACACTCACTATATTGT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCTCGACCGGGAGCTTGCCGGCATCGTGGA
GTATTCCCCGCGCCAGCGGGGATAAACCG	CAATCATCTGATTTTTTATCATTGAGAGATAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTCTTATATGTAAAAAACCGTTATGAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGGAAAGAACTCGCCTCGTCCAGCGTCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAATATGAATAACAACGTACCACTCATCGCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GAGCACTTTTACTGTAGGACTTGTATGAATCT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCCGTAGCGCCGCTCAGTCCGGGGGATGGT
GTATTCCCCGCACCAGCGGGGATAAACCG	CAATTGCGTTCTTGCTTATGCCCAGCGACTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATTTCAAACACTCCGGGTCTGCCAGCGCCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGCGGACGCCGCTCAGATAGCCAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATACAGGATTCTCACACTTTGGTTTGGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTTTTTATTTGTACTATTGTCAGTACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAAACAAACAAAGTTTTGCGCGATTCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCAGGTAACAATATCGTCCCCGACCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAATTCCCCAGATACCGCGCATCGGCACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAATTAATGTCCAGGACCTTATTAAGTTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTCGGGGATTTTGTGCCACCCAAAACGCTCGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCCACAACCACAATGGATCAGGAGCAATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCTAGCGGGGATAAACCG

>NZ_CP043222|1|1|2373543-2374852|CRISPRCasFinder
GTATTCCCCGCGCCAGCGGGGATAAACCG	CCCGGTTTTACCGCCAACACTCACTATATTGT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCTCGACCGGGAGCTTGCCGGCATCGTGGA
GTATTCCCCGCGCCAGCGGGGATAAACCG	CAATCATCTGATTTTTTATCATTGAGAGATAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTCTTATATGTAAAAAACCGTTATGAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGGAAAGAACTCGCCTCGTCCAGCGTCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAATATGAATAACAACGTACCACTCATCGCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GAGCACTTTTACTGTAGGACTTGTATGAATCT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCCGTAGCGCCGCTCAGTCCGGGGGATGGT
GTATTCCCCGCACCAGCGGGGATAAACCG	CAATTGCGTTCTTGCTTATGCCCAGCGACTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATTTCAAACACTCCGGGTCTGCCAGCGCCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGCGGACGCCGCTCAGATAGCCAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATACAGGATTCTCACACTTTGGTTTGGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTTTTTATTTGTACTATTGTCAGTACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAAACAAACAAAGTTTTGCGCGATTCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCAGGTAACAATATCGTCCCCGACCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAATTCCCCAGATACCGCGCATCGGCACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAATTAATGTCCAGGACCTTATTAAGTTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTCGGGGATTTTGTGCCACCCAAAACGCTCGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCCACAACCACAATGGATCAGGAGCAATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGGATGAAAACGCCTACCCGGAAGACTACGA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

>NZ_CP043222|1|1|2373543-2374852|CRT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CCCGGTTTTACCGCCAACACTCACTATATTGT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCTCGACCGGGAGCTTGCCGGCATCGTGGA
GTATTCCCCGCGCCAGCGGGGATAAACCG	CAATCATCTGATTTTTTATCATTGAGAGATAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTCTTATATGTAAAAAACCGTTATGAT
GTATTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGGAAAGAACTCGCCTCGTCCAGCGTCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GCAATATGAATAACAACGTACCACTCATCGCA
GTATTCCCCGCGCCAGCGGGGATAAACCG	GAGCACTTTTACTGTAGGACTTGTATGAATCT
GTATTCCCCGCGCCAGCGGGGATAAACCG	CGGCCGTAGCGCCGCTCAGTCCGGGGGATGGT
GTATTCCCCGCACCAGCGGGGATAAACCG	CAATTGCGTTCTTGCTTATGCCCAGCGACTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATTTCAAACACTCCGGGTCTGCCAGCGCCTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCGGCGGACGCCGCTCAGATAGCCAAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATACAGGATTCTCACACTTTGGTTTGGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTTTTTTATTTGTACTATTGTCAGTACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGAAACAAACAAAGTTTTGCGCGATTCCACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCAGGTAACAATATCGTCCCCGACCTTTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAATTCCCCAGATACCGCGCATCGGCACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAATTAATGTCCAGGACCTTATTAAGTTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTCGGGGATTTTGTGCCACCCAAAACGCTCGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGCCACAACCACAATGGATCAGGAGCAATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CCGGATGAAAACGCCTACCCGGAAGACTACGA
GTGTTCCCCGCGCCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043222.1\|WP_000706479.1\|2359340_2360483_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP043222.1\|WP_000108313.1\|2375834_2376197_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP043222.1\|WP_000666424.1\|2388882_2389608_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP043222.1\|WP_000186400.1\|2360526_2363283_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP043222.1\|WP_000210864.1\|2369420_2371058_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP043222.1\|WP_000226841.1\|2364687_2366922_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP043222.1\|WP_000210451.1\|2368392_2369193_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP043222.1\|WP_058111547.1\|2374949_2375747_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP043222.1\|WP_023217503.1\|2363340_2364636_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP043222.1\|WP_001261199.1\|2367328_2367625_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP043222.1\|WP_001049217.1\|2385637_2387173_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP043222.1\|WP_072210335.1\|2381040_2381994_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP043222.1\|WP_000480218.1\|2367006_2367363_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP043222.1\|WP_000935101.1\|2387189_2387792_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP043222.1\|WP_000080397.1\|2380218_2380953_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP043222.1\|WP_000606120.1\|2387808_2388873_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP043222.1\|WP_000036734.1\|2371140_2372439_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP043222.1\|WP_000210922.1\|2376631_2378431_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP043222.1\|WP_001290664.1\|2378430_2380143_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP043222.1\|WP_001199956.1\|2372574_2373246_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_CP043222.1\|WP_000706479.1\|2359340_2360483_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP043222.1\|WP_000108313.1\|2375834_2376197_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP043222.1\|WP_000666424.1\|2388882_2389608_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38262e-47
NZ_CP043222.1\|WP_000186400.1\|2360526_2363283_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP043222.1\|WP_000210864.1\|2369420_2371058_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP043222.1\|WP_000226841.1\|2364687_2366922_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP043222.1\|WP_000210451.1\|2368392_2369193_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP043222.1\|WP_058111547.1\|2374949_2375747_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.51648e-102
NZ_CP043222.1\|WP_023217503.1\|2363340_2364636_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP043222.1\|WP_001261199.1\|2367328_2367625_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	4.79136e-12
NZ_CP043222.1\|WP_001049217.1\|2385637_2387173_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP043222.1\|WP_072210335.1\|2381040_2381994_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP043222.1\|WP_000480218.1\|2367006_2367363_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP043222.1\|WP_000935101.1\|2387189_2387792_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.9872e-37
NZ_CP043222.1\|WP_000080397.1\|2380218_2380953_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.66828e-138
NZ_CP043222.1\|WP_000606120.1\|2387808_2388873_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.61141e-122
NZ_CP043222.1\|WP_000036734.1\|2371140_2372439_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP043222.1\|WP_000210922.1\|2376631_2378431_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP043222.1\|WP_001290664.1\|2378430_2380143_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP043222.1\|WP_001199956.1\|2372574_2373246_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.27998e-154

>NZ_CP043222.1|WP_001199956.1|2372574_2373246_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQDYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP043222.1|WP_000036734.1|2371140_2372439_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP043222.1|WP_000210864.1|2369420_2371058_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK
>NZ_CP043222.1|WP_000210451.1|2368392_2369193_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP043222.1|WP_001261199.1|2367328_2367625_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRTVKLTPKASEDLENIWHYGWLYFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFERHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP043222.1|WP_000480218.1|2367006_2367363_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP043222.1|WP_000226841.1|2364687_2366922_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP043222.1|WP_023217503.1|2363340_2364636_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAVLLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMIARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP043222.1|WP_000186400.1|2360526_2363283_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP043222.1|WP_000706479.1|2359340_2360483_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP043222.1|WP_058111547.1|2374949_2375747_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDDSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKQIYALIGGFHLRCASPFTMWRVRRFLQEQKPEKLCGCHCTGVWGRLWLPEITAPATGDVLRF
>NZ_CP043222.1|WP_000108313.1|2375834_2376197_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP043222.1|WP_000210922.1|2376631_2378431_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMLGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRVPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>NZ_CP043222.1|WP_001290664.1|2378430_2380143_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP043222.1|WP_000080397.1|2380218_2380953_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP043222.1|WP_072210335.1|2381040_2381994_-|SPI-1-type-III-secretion-system-effector-SopD
MPVILSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTMISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTSNAQIKVAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLT
>NZ_CP043222.1|WP_001049217.1|2385637_2387173_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLITEKWLPVIFSSGEKTRISLRDLLDNRIQDLAYPRPDFQGAAWQMLIGILQCTIAPEDKEEWADIWHDGIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNTLKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNSHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNNMSLWCFAFDMDNAKARCWYQHRIPLISVSHEEQFLAALNTVLVLASEALSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>NZ_CP043222.1|WP_000935101.1|2387189_2387792_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAALCRILHPDAQKALLDWFATLSERYERKDGKRVNGRVWRAELKRMAPPYGVMICEGYDALRQTLLKHMRLQPLDEMALALFVSVAVHIKSHKENISFAAQLGEKLNGSTPCVSVLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRTPFERNRIRWANEYLSTSRGK
>NZ_CP043222.1|WP_000606120.1|2387808_2388873_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MIMTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIAAGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_CP043222.1|WP_000666424.1|2388882_2389608_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT

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Crispr_ID: NZ_CP043222_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043222_2

2391610-2392553

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

15 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP043222_2

>merge|NZ_CP043222|2|2391610-2392553|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAAACATCCGATCAAATACTGCGTTCGTTTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTATTTTTGAACTGGCCAGCGCCACCGATGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTACGCGGGCGTCTGTTAAAGAGTCCTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGGGGTTTCCCAGAGGCATTCTGATGAAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATGCAGATGCCTCCCGTACTGCCGCCGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTGGCCCTTAGATAACGGGAGATCAAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCATAACCTTCGCTACCACACTTGCCGGTACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTGAGGTTAGGGGAGTCAGGAAATTGCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGACAAAATCGGCGGCCCAATCGCCGGCGCTGACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCTGCCGTCTTTTTATTGAGGTCTGTAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCTTAATCATTTTGTTTAAATCCCGGATCACCTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGTTATTGTCACTCGTCAGTGATAATTTTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCGTTGAAGATCTGGACGCATGGGGCAAAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAGCTCGGTTTTAATTTCGTCGCTAAGGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAGGCCGACAGTGTGTACACCTCTAAAAAGTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP043222|2|2|2391610-2392552|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAACATCCGATCAAATACTGCGTTCGTTTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTATTTTTGAACTGGCCAGCGCCACCGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGTTACGCGGGCGTCTGTTAAAGAGTCCTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCCGGGGTTTCCCAGAGGCATTCTGATGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAATGCAGATGCCTCCCGTACTGCCGCCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGATTGGCCCTTAGATAACGGGAGATCAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATAACCTTCGCTACCACACTTGCCGGTACTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCTTGAGGTTAGGGGAGTCAGGAAATTGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACAAAATCGGCGGCCCAATCGCCGGCGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCCTGCCGTCTTTTTATTGAGGTCTGTAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	TTAATCATTTTGTTTAAATCCCGGATCACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGTTATTGTCACTCGTCAGTGATAATTTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCCGTTGAAGATCTGGACGCATGGGGCAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGAGCTCGGTTTTAATTTCGTCGCTAAGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAAAAGGCCGACAGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACA

>NZ_CP043222|2|2|2391610-2392553|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACATCCGATCAAATACTGCGTTCGTTTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTATTTTTGAACTGGCCAGCGCCACCGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTACGCGGGCGTCTGTTAAAGAGTCCTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGGGGTTTCCCAGAGGCATTCTGATGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATGCAGATGCCTCCCGTACTGCCGCCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTGGCCCTTAGATAACGGGAGATCAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAACCTTCGCTACCACACTTGCCGGTACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGAGGTTAGGGGAGTCAGGAAATTGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAATCGGCGGCCCAATCGCCGGCGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGCCGTCTTTTTATTGAGGTCTGTAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TAATCATTTTGTTTAAATCCCGGATCACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTTATTGTCACTCGTCAGTGATAATTTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTTGAAGATCTGGACGCATGGGGCAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGCTCGGTTTTAATTTCGTCGCTAAGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAGGCCGACAGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP043222|2|2|2391610-2392553|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACATCCGATCAAATACTGCGTTCGTTTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTATTTTTGAACTGGCCAGCGCCACCGATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTACGCGGGCGTCTGTTAAAGAGTCCTCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGGGGTTTCCCAGAGGCATTCTGATGAAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATGCAGATGCCTCCCGTACTGCCGCCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTGGCCCTTAGATAACGGGAGATCAAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAACCTTCGCTACCACACTTGCCGGTACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTGAGGTTAGGGGAGTCAGGAAATTGCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAAAATCGGCGGCCCAATCGCCGGCGCTGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGCCGTCTTTTTATTGAGGTCTGTAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TAATCATTTTGTTTAAATCCCGGATCACCTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTTATTGTCACTCGTCAGTGATAATTTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGTTGAAGATCTGGACGCATGGGGCAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGCTCGGTTTTAATTTCGTCGCTAAGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAGGCCGACAGTGTGTACACCTCTAAAAA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043222.1\|WP_000062281.1\|2391231_2391525_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP043222.1\|WP_000436059.1\|2393864_2394773_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP043222.1\|WP_000490481.1\|2392567_2393614_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP043222.1\|WP_072210335.1\|2381040_2381994_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP043222.1\|WP_000606120.1\|2387808_2388873_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP043222.1\|WP_001221538.1\|2399924_2400686_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP043222.1\|WP_001092269.1\|2394782_2396222_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP043222.1\|WP_001290664.1\|2378430_2380143_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP043222.1\|WP_000281417.1\|2389607_2390315_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
NZ_CP043222.1\|WP_001219244.1\|2398418_2398898_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP043222.1\|WP_001118109.1\|2396831_2397188_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP043222.1\|WP_001173663.1\|2396208_2396814_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP043222.1\|WP_001049217.1\|2385637_2387173_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP043222.1\|WP_000741649.1\|2397708_2398419_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP043222.1\|WP_000134246.1\|2398894_2399944_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP043222.1\|WP_000517480.1\|2397378_2397690_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP043222.1\|WP_000080397.1\|2380218_2380953_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP043222.1\|WP_000666424.1\|2388882_2389608_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP043222.1\|WP_000935101.1\|2387189_2387792_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP043222.1\|WP_000118671.1\|2390311_2391229_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693

Protein	Function_ID	Function_description	E-value
NZ_CP043222.1\|WP_000062281.1\|2391231_2391525_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.59475e-65
NZ_CP043222.1\|WP_000436059.1\|2393864_2394773_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP043222.1\|WP_000490481.1\|2392567_2393614_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP043222.1\|WP_072210335.1\|2381040_2381994_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP043222.1\|WP_000606120.1\|2387808_2388873_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.61141e-122
NZ_CP043222.1\|WP_001221538.1\|2399924_2400686_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP043222.1\|WP_001092269.1\|2394782_2396222_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP043222.1\|WP_001290664.1\|2378430_2380143_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP043222.1\|WP_000281417.1\|2389607_2390315_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.13186e-88
NZ_CP043222.1\|WP_001219244.1\|2398418_2398898_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP043222.1\|WP_001118109.1\|2396831_2397188_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP043222.1\|WP_001173663.1\|2396208_2396814_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP043222.1\|WP_001049217.1\|2385637_2387173_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP043222.1\|WP_000741649.1\|2397708_2398419_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP043222.1\|WP_000134246.1\|2398894_2399944_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP043222.1\|WP_000517480.1\|2397378_2397690_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP043222.1\|WP_000080397.1\|2380218_2380953_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.66828e-138
NZ_CP043222.1\|WP_000666424.1\|2388882_2389608_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38262e-47
NZ_CP043222.1\|WP_000935101.1\|2387189_2387792_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	2.9872e-37
NZ_CP043222.1\|WP_000118671.1\|2390311_2391229_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.48412e-156

>NZ_CP043222.1|WP_000062281.1|2391231_2391525_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP043222.1|WP_000118671.1|2390311_2391229_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWLGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAEGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>NZ_CP043222.1|WP_000281417.1|2389607_2390315_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLSQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQYRFVRKDQQKPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKRR
>NZ_CP043222.1|WP_000666424.1|2388882_2389608_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>NZ_CP043222.1|WP_000606120.1|2387808_2388873_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MIMTTFIQLHLLTAYAPANLNRDDSGRPKTAYMGGVERLRVSSQSLKRAWRVSETFEGAMDGFMGKRTRRIGVDYVYRPMIAAGVTGKIAKSAAEKIAAQFGKLKSDKNAPEEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLATAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_CP043222.1|WP_000935101.1|2387189_2387792_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAALCRILHPDAQKALLDWFATLSERYERKDGKRVNGRVWRAELKRMAPPYGVMICEGYDALRQTLLKHMRLQPLDEMALALFVSVAVHIKSHKENISFAAQLGEKLNGSTPCVSVLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRTPFERNRIRWANEYLSTSRGK
>NZ_CP043222.1|WP_001049217.1|2385637_2387173_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLITEKWLPVIFSSGEKTRISLRDLLDNRIQDLAYPRPDFQGAAWQMLIGILQCTIAPEDKEEWADIWHDGIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNTLKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNSHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNNMSLWCFAFDMDNAKARCWYQHRIPLISVSHEEQFLAALNTVLVLASEALSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>NZ_CP043222.1|WP_072210335.1|2381040_2381994_-|SPI-1-type-III-secretion-system-effector-SopD
MPVILSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTMISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTSNAQIKVAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLT
>NZ_CP043222.1|WP_000080397.1|2380218_2380953_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP043222.1|WP_001290664.1|2378430_2380143_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP043222.1|WP_000490481.1|2392567_2393614_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP043222.1|WP_000436059.1|2393864_2394773_+|sulfate-adenylyltransferase-subunit-CysD
MEQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP043222.1|WP_001092269.1|2394782_2396222_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP043222.1|WP_001173663.1|2396208_2396814_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP043222.1|WP_001118109.1|2396831_2397188_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP043222.1|WP_000517480.1|2397378_2397690_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP043222.1|WP_000741649.1|2397708_2398419_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP043222.1|WP_001219244.1|2398418_2398898_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP043222.1|WP_000134246.1|2398894_2399944_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP043222.1|WP_001221538.1|2399924_2400686_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP043222_2	2.2\|2391699\|33\|NZ_CP043222\|PILER-CR	2391699-2391731	33	NZ_CP043222.1	2083273-2083305	0	1.0
NZ_CP043222_2	2.17\|2391700\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391700-2391731	32	NZ_CP043222.1	2083274-2083305	0	1.0

1. spacer 2.2|2391699|33|NZ_CP043222|PILER-CR matches to position: 2083273-2083305, mismatch: 0, identity: 1.0

gcgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
gcgtatttttgaactggccagcgccaccgatgc	Protospacer
*********************************

2. spacer 2.17|2391700|32|NZ_CP043222|CRISPRCasFinder,CRT matches to position: 2083274-2083305, mismatch: 0, identity: 1.0

cgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
cgtatttttgaactggccagcgccaccgatgc	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043222_2	2.1\|2391638\|33\|NZ_CP043222\|PILER-CR	2391638-2391670	33	NC_010392	Phage Gifsy-1, complete genome	47888-47920	0	1.0
NZ_CP043222_2	2.5\|2391882\|33\|NZ_CP043222\|PILER-CR	2391882-2391914	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	65911-65943	0	1.0
NZ_CP043222_2	2.5\|2391882\|33\|NZ_CP043222\|PILER-CR	2391882-2391914	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	87247-87279	0	1.0
NZ_CP043222_2	2.5\|2391882\|33\|NZ_CP043222\|PILER-CR	2391882-2391914	33	NC_010391	Salmonella phage Fels-1, complete genome	37115-37147	0	1.0
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	515-547	0	1.0
NZ_CP043222_2	2.12\|2392309\|33\|NZ_CP043222\|PILER-CR	2392309-2392341	33	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	5506-5538	0	1.0
NZ_CP043222_2	2.16\|2391639\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391639-2391670	32	NC_010392	Phage Gifsy-1, complete genome	47888-47919	0	1.0
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	65912-65943	0	1.0
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	87247-87278	0	1.0
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NC_010391	Salmonella phage Fels-1, complete genome	37116-37147	0	1.0
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	515-546	0	1.0
NZ_CP043222_2	2.27\|2392310\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392310-2392341	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	95-126	0	1.0
NZ_CP043222_2	2.27\|2392310\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392310-2392341	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	2585-2616	0	1.0
NZ_CP043222_2	2.27\|2392310\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392310-2392341	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	105065-105096	0	1.0
NZ_CP043222_2	2.27\|2392310\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392310-2392341	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	5506-5537	0	1.0
NZ_CP043222_1	1.9\|2374060\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374060-2374091	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	50515-50546	1	0.969
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NC_010392	Phage Gifsy-1, complete genome	21497-21529	1	0.97
NZ_CP043222_2	2.5\|2391882\|33\|NZ_CP043222\|PILER-CR	2391882-2391914	33	NC_010393	Phage Gifsy-2, complete genome	38914-38946	1	0.97
NZ_CP043222_2	2.6\|2391943\|33\|NZ_CP043222\|PILER-CR	2391943-2391975	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	28846-28878	1	0.97
NZ_CP043222_2	2.9\|2392126\|33\|NZ_CP043222\|PILER-CR	2392126-2392158	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	32069-32101	1	0.97
NZ_CP043222_2	2.12\|2392309\|33\|NZ_CP043222\|PILER-CR	2392309-2392341	33	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	94-126	1	0.97
NZ_CP043222_2	2.12\|2392309\|33\|NZ_CP043222\|PILER-CR	2392309-2392341	33	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	2584-2616	1	0.97
NZ_CP043222_2	2.12\|2392309\|33\|NZ_CP043222\|PILER-CR	2392309-2392341	33	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	105065-105097	1	0.97
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NC_010392	Phage Gifsy-1, complete genome	21497-21528	1	0.969
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NC_010393	Phage Gifsy-2, complete genome	38915-38946	1	0.969
NZ_CP043222_2	2.21\|2391944\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391944-2391975	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	28847-28878	1	0.969
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	32069-32100	1	0.969
NZ_CP043222_2	2.2\|2391699\|33\|NZ_CP043222\|PILER-CR	2391699-2391731	33	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	2256-2288	2	0.939
NZ_CP043222_2	2.5\|2391882\|33\|NZ_CP043222\|PILER-CR	2391882-2391914	33	NC_010392	Phage Gifsy-1, complete genome	7891-7923	2	0.939
NZ_CP043222_2	2.5\|2391882\|33\|NZ_CP043222\|PILER-CR	2391882-2391914	33	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	9101-9133	2	0.939
NZ_CP043222_2	2.17\|2391700\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391700-2391731	32	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	2256-2287	2	0.938
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NC_010392	Phage Gifsy-1, complete genome	7891-7922	2	0.938
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	9101-9132	2	0.938
NZ_CP043222_2	2.3\|2391760\|33\|NZ_CP043222\|PILER-CR	2391760-2391792	33	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	35847-35879	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_KP987215	Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence	70790-70822	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP029733	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence	37641-37673	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP035635	Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence	62133-62165	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP030079	Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence	45128-45160	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP038468	Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence	85530-85562	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP024681	Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence	103609-103641	3	0.909
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP022492	Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence	90997-91029	3	0.909
NZ_CP043222_2	2.12\|2392309\|33\|NZ_CP043222\|PILER-CR	2392309-2392341	33	NZ_CP014707	Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence	36455-36487	3	0.909
NZ_CP043222_2	2.18\|2391761\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391761-2391792	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	35847-35878	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_KP987215	Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence	70790-70821	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP029733	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence	37642-37673	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP035635	Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence	62133-62164	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP030079	Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence	45128-45159	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP038468	Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence	85530-85561	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP024681	Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence	103610-103641	3	0.906
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP022492	Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence	90998-91029	3	0.906
NZ_CP043222_2	2.27\|2392310\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392310-2392341	32	NZ_CP014707	Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence	36455-36486	3	0.906
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	9205-9237	4	0.879
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	280926-280958	4	0.879
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	9212-9244	4	0.879
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	9215-9247	4	0.879
NZ_CP043222_2	2.4\|2391821\|33\|NZ_CP043222\|PILER-CR	2391821-2391853	33	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	9215-9247	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	19008-19040	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	19008-19040	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	84372-84404	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	63167-63199	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	NZ_MG825379	Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence	85305-85337	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	86223-86255	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	35260-35292	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	35685-35717	4	0.879
NZ_CP043222_2	2.10\|2392187\|33\|NZ_CP043222\|PILER-CR	2392187-2392219	33	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	112673-112705	4	0.879
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	9205-9236	4	0.875
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	280926-280957	4	0.875
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	9212-9243	4	0.875
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	9215-9246	4	0.875
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	9215-9246	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	CP054337	Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence	35260-35291	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	MN232192	Escherichia coli plasmid pGD27-62, complete sequence	19009-19040	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	MF510496	Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence	19009-19040	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	NZ_CP052881	Escherichia coli strain C21 plasmid pC21-4, complete sequence	84373-84404	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	NZ_CP015837	Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence	35685-35716	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	NZ_CP033848	Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence	63168-63199	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	NZ_LT985263	Escherichia coli strain 511 plasmid RCS54_p, complete sequence	112673-112704	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	NZ_MG825379	Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence	85306-85337	4	0.875
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	NZ_MG288678	Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence	86224-86255	4	0.875
NZ_CP043222_1	1.10\|2374121\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374121-2374152	32	MH001450	Mycobacterium phage Jeon, complete genome	52496-52527	6	0.812
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	282027-282058	7	0.781
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	277006-277037	7	0.781
NZ_CP043222_1	1.3\|2373694\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373694-2373725	32	MN694526	Marine virus AFVG_250M936, complete genome	19637-19668	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	18540-18571	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP021139	Sulfuriferula sp. AH1 plasmid unnamed, complete sequence	34949-34980	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	713509-713540	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1958338-1958369	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1607565-1607596	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1733499-1733530	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1309026-1309057	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1322594-1322625	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1412851-1412882	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1412851-1412882	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1412851-1412882	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1412054-1412085	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1446942-1446973	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	738218-738249	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1412850-1412881	7	0.781
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1446945-1446976	7	0.781
NZ_CP043222_2	2.27\|2392310\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392310-2392341	32	NZ_CP044178	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1	11447-11478	7	0.781
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	16478-16509	8	0.75
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	16478-16509	8	0.75
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	242615-242646	8	0.75
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	224573-224604	8	0.75
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP054026	Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence	285767-285798	8	0.75
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	494228-494259	8	0.75
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	267700-267731	8	0.75
NZ_CP043222_1	1.8\|2373999\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373999-2374030	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	701316-701347	8	0.75
NZ_CP043222_1	1.9\|2374060\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374060-2374091	32	NZ_CP028385	Providencia heimbachae strain 99101 plasmid unnamed, complete sequence	46735-46766	8	0.75
NZ_CP043222_2	2.9\|2392126\|33\|NZ_CP043222\|PILER-CR	2392126-2392158	33	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	18540-18572	8	0.758
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP050076	Enterobacter kobei strain 070 plasmid p070_B, complete sequence	2769-2800	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP041049	Citrobacter sp. CF971 plasmid pBM527-3, complete sequence	2001-2032	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP022300	Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence	1471-1502	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_KX912255	Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence	23292-23323	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_KX863568	Citrobacter freundii strain AtetA plasmid pLNU-11, complete sequence	34497-34528	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_022346	Pseudomonas aeruginosa strain ST308 plasmid pCOL-1, complete sequence	6722-6753	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	LC486677	Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence	27530-27561	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_KU578314	Pseudomonas aeruginosa strain 10265 plasmid p10265-KPC, complete sequence	37605-37636	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_KR014106	Aeromonas hydrophila strain WCHAH01 plasmid pKPC2, complete sequence	39677-39708	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	MN539620	Citrobacter sp. strain 172116965 plasmid p116965-KPC, complete sequence	38679-38710	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_007100	Pseudomonas aeruginosa plasmid Rms149, complete sequence	112-143	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	MN436715	Klebsiella pneumoniae strain NMI4661/17 plasmid pKRA-GES-5, complete sequence	14017-14048	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	LC155906	Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507	2656-2687	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP027855	Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-3, complete sequence	1966-1997	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP038596	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.1, complete sequence	12810-12841	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_AP019194	Aeromonas hydrophila strain GSH8-2 plasmid pGSH8-2, complete sequence	37837-37868	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	KM659090	Achromobacter sp. LM16 plasmid pLM16A1, complete sequence	2611-2642	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_AP019197	Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-2, complete sequence	52395-52426	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	DQ839391	Uncultured bacterium plasmid pRSB105, complete sequence	18510-18541	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	MK050973	Citrobacter freundii plasmid pCRE12-KPC, complete sequence	30111-30142	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP028566	Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 plasmid pKPC2_045096, complete sequence	37642-37673	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP019671	Burkholderia cenocepacia strain VC12308 plasmid unnamed, complete sequence	16427-16458	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP018968	Escherichia coli strain Ecol_542 plasmid pEC542_KPC, complete sequence	10052-10083	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_LS998784	Pseudomonas aeruginosa isolate 1 plasmid 2, complete sequence	22863-22894	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP026224	Aeromonas sp. ASNIH3 plasmid pKPC-cd17, complete sequence	34896-34927	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	MN477223	Enterobacter cloacae strain 30860 plasmid p30860-KPC, complete sequence	37679-37710	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP040685	Pseudomonas aeruginosa strain C79 plasmid p1, complete sequence	2881-2912	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_019267	Serratia marcescens plasmid pRIO-5, complete sequence	3873-3904	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_011604	Salmonella enterica subsp. enterica serovar Westhampton plasmid pWES-1, complete sequence	9118-9149	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_005909	Pseudomonas alcaligenes plasmid pRA2, complete sequence	19963-19994	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP026703	Serratia marcescens strain AR_0027 plasmid unitig_1_pilon, complete sequence	10311-10342	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_LT992437	Citrobacter freundii isolate CF121SC21 plasmid 1, complete sequence	38852-38883	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MH909348	Klebsiella pneumoniae strain A1705 plasmid pA1705-KPC, complete sequence	40721-40752	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MH909350	Klebsiella pneumoniae strain A1706 plasmid pA1706-KPC, complete sequence	17232-17263	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MF497782	Morganella morganii strain Mmo-37590cz plasmid pMMO-37590cz, complete sequence	536-567	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MH624130	Aeromonas taiwanensis strain L186 plasmid p186-KPC, complete sequence	2824-2855	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MH919378	Citrobacter braakii strain CRE3 plasmid pCRE3-KPC, complete sequence	35841-35872	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP032895	Enterobacter kobei strain WCHEK045523 plasmid pKPC2_045523, complete sequence	41791-41822	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MF168945	Pseudomonas aeruginosa strain FFUP_PS_35 plasmid pJB35, complete sequence	21390-21421	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MG558000	Citrobacter freundii strain Cfr-33795cz plasmid pCfr-33795cz, complete sequence	536-567	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_047756	Caulobacter phage Sansa, complete genome	24638-24669	8	0.75
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	466363-466394	8	0.75
NZ_CP043222_1	1.1\|2373572\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373572-2373603	32	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	364322-364353	9	0.719
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	40929-40960	9	0.719
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	157802-157833	9	0.719
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	179339-179370	9	0.719
NZ_CP043222_1	1.11\|2374182\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374182-2374213	32	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	79853-79884	9	0.719
NZ_CP043222_1	1.13\|2374304\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374304-2374335	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	1340-1371	9	0.719
NZ_CP043222_1	1.13\|2374304\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374304-2374335	32	KX156762	Staphylococcus phage vB_SauS_IMEP5, complete genome	15936-15967	9	0.719
NZ_CP043222_1	1.21\|2374792\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2374792-2374823	32	NC_047851	Brevibacterium phage LuckyBarnes, complete genome	31262-31293	9	0.719
NZ_CP043222_2	2.2\|2391699\|33\|NZ_CP043222\|PILER-CR	2391699-2391731	33	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	59147-59179	9	0.727
NZ_CP043222_2	2.9\|2392126\|33\|NZ_CP043222\|PILER-CR	2392126-2392158	33	NC_047756	Caulobacter phage Sansa, complete genome	24637-24669	9	0.727
NZ_CP043222_2	2.17\|2391700\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391700-2391731	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	59147-59178	9	0.719
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP012988	Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence	126334-126365	9	0.719
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP045676	Klebsiella pneumoniae strain WSD411 plasmid pWSD411_3, complete sequence	47101-47132	9	0.719
NZ_CP043222_2	2.19\|2391822\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391822-2391853	32	NZ_CP012993	Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence	126334-126365	9	0.719
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NZ_LR723669	Rhizobium sp. Khangiran2 plasmid 2	73596-73627	9	0.719
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	MK392366	Streptomyces phage Janus, complete genome	15497-15528	9	0.719
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP034654	Xanthomonas vasicola pv. arecae strain NCPPB 2649 plasmid pXCARECAE29, complete sequence	10636-10667	9	0.719
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP015374	Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence	16041-16072	9	0.719
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NC_016053	Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence	36980-37011	9	0.719
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_LR594694	Variovorax sp. WDL1 plasmid 6	124-155	9	0.719
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_MF344578	Pseudomonas aeruginosa strain 60512 plasmid p60512-IMP, complete sequence	23499-23530	9	0.719
NZ_CP043222_2	2.25\|2392188\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392188-2392219	32	HG796856	Uncultured bacterium plasmid pRGF00250	451-482	9	0.719
NZ_CP043222_2	2.26\|2392249\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392249-2392280	32	MT374854	Yersinia phage vB_YpM_6, complete genome	883-914	9	0.719
NZ_CP043222_2	2.26\|2392249\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392249-2392280	32	MT374853	Yersinia phage vB_YpM_5, complete genome	2308-2339	9	0.719
NZ_CP043222_1	1.1\|2373572\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373572-2373603	32	NZ_KT937281	Edwardsiella ictaluri strain RUSVM-1 plasmid pEI2, complete sequence	935-966	10	0.688
NZ_CP043222_1	1.2\|2373633\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373633-2373664	32	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	24503-24534	10	0.688
NZ_CP043222_1	1.7\|2373938\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2373938-2373969	32	NZ_CP017759	Cupriavidus necator strain NH9 plasmid pENH92, complete sequence	55897-55928	10	0.688
NZ_CP043222_1	1.13\|2374304\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374304-2374335	32	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	24667-24698	10	0.688
NZ_CP043222_1	1.13\|2374304\|32\|NZ_CP043222\|PILER-CR,CRISPRCasFinder,CRT	2374304-2374335	32	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	396582-396613	10	0.688
NZ_CP043222_2	2.9\|2392126\|33\|NZ_CP043222\|PILER-CR	2392126-2392158	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	243222-243254	10	0.697
NZ_CP043222_2	2.20\|2391883\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391883-2391914	32	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	126933-126964	10	0.688
NZ_CP043222_2	2.24\|2392127\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2392127-2392158	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	243222-243253	10	0.688

1. spacer 2.1|2391638|33|NZ_CP043222|PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

gaaacatccgatcaaatactgcgttcgtttgag	CRISPR spacer
gaaacatccgatcaaatactgcgttcgtttgag	Protospacer
*********************************

2. spacer 2.5|2391882|33|NZ_CP043222|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccgga	Protospacer
*********************************

3. spacer 2.5|2391882|33|NZ_CP043222|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccgga	Protospacer
*********************************

4. spacer 2.5|2391882|33|NZ_CP043222|PILER-CR matches to NC_010391 (Salmonella phage Fels-1, complete genome) position: , mismatch: 0, identity: 1.0

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccgga	Protospacer
*********************************

5. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
ggcctgccgtctttttattgaggtctgtaaacc	Protospacer
*********************************

6. spacer 2.12|2392309|33|NZ_CP043222|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
ggagttattgtcactcgtcagtgataattttct	Protospacer
*********************************

7. spacer 2.16|2391639|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 0, identity: 1.0

aaacatccgatcaaatactgcgttcgtttgag	CRISPR spacer
aaacatccgatcaaatactgcgttcgtttgag	Protospacer
********************************

8. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccgga	Protospacer
********************************

9. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccgga	Protospacer
********************************

10. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_010391 (Salmonella phage Fels-1, complete genome) position: , mismatch: 0, identity: 1.0

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccgga	Protospacer
********************************

11. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gcctgccgtctttttattgaggtctgtaaacc	Protospacer
********************************

12. spacer 2.27|2392310|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

13. spacer 2.27|2392310|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

14. spacer 2.27|2392310|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

15. spacer 2.27|2392310|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactcgtcagtgataattttct	Protospacer
********************************

16. spacer 1.9|2374060|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

caattgcgttcttgcttatgcccagcgactta	CRISPR spacer
caattgcgttcttgcttatgcccagcgactga	Protospacer
****************************** *

17. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 1, identity: 0.97

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaaag	Protospacer
**************.******************

18. spacer 2.5|2391882|33|NZ_CP043222|PILER-CR matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 1, identity: 0.97

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgcctcccgtactgccgccggc	Protospacer
********************************

19. spacer 2.6|2391943|33|NZ_CP043222|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.97

ggattggcccttagataacgggagatcaagcgc	CRISPR spacer
ggattggcccttagataacgggagatcaagtgc	Protospacer
******************************.**

20. spacer 2.9|2392126|33|NZ_CP043222|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.97

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
gacaaaatcggcggcccgatcgccggcgctgac	Protospacer
*****************.***************

21. spacer 2.12|2392309|33|NZ_CP043222|PILER-CR matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 1, identity: 0.97

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
tgagttattgtcactcgtcagtgataattttct	Protospacer
 ********************************

22. spacer 2.12|2392309|33|NZ_CP043222|PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 1, identity: 0.97

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
tgagttattgtcactcgtcagtgataattttct	Protospacer
 ********************************

23. spacer 2.12|2392309|33|NZ_CP043222|PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 1, identity: 0.97

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
tgagttattgtcactcgtcagtgataattttct	Protospacer
 ********************************

24. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 1, identity: 0.969

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaaag	Protospacer
*************.******************

25. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 1, identity: 0.969

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgcctcccgtactgccgccggc	Protospacer
*******************************

26. spacer 2.21|2391944|32|NZ_CP043222|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

gattggcccttagataacgggagatcaagcgc	CRISPR spacer
gattggcccttagataacgggagatcaagtgc	Protospacer
*****************************.**

27. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
acaaaatcggcggcccgatcgccggcgctgac	Protospacer
****************.***************

28. spacer 2.2|2391699|33|NZ_CP043222|PILER-CR matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

gcgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
gcgtatttttgaactggccagtgctaccgatgc	Protospacer
*********************.**.********

29. spacer 2.5|2391882|33|NZ_CP043222|PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 2, identity: 0.939

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcagatgtctcccgtactgccgccggc	Protospacer
*************.******************

30. spacer 2.5|2391882|33|NZ_CP043222|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 2, identity: 0.939

gcgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgaatgcggacgcctcccgtactgccgccgga	Protospacer
********.**.*********************

31. spacer 2.17|2391700|32|NZ_CP043222|CRISPRCasFinder,CRT matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

cgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
cgtatttttgaactggccagtgctaccgatgc	Protospacer
********************.**.********

32. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 2, identity: 0.938

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcagatgtctcccgtactgccgccggc	Protospacer
************.******************

33. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 2, identity: 0.938

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
cgaatgcggacgcctcccgtactgccgccgga	Protospacer
*******.**.*********************

34. spacer 2.3|2391760|33|NZ_CP043222|PILER-CR matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.909

gggttacgcgggcgtctgttaaagagtcctcgt	CRISPR spacer
gggttgcgcgggcgtctgttgaagagtcctcgc	Protospacer
*****.**************.***********.

35. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_KP987215 (Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

36. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP029733 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

37. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP035635 (Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

38. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP030079 (Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

39. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP038468 (Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

40. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP024681 (Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgaata	Protospacer
**************.**************** .

41. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP022492 (Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.909

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggggtttcccggaggcattctgatgacaa	Protospacer
**************.*************** *.

42. spacer 2.12|2392309|33|NZ_CP043222|PILER-CR matches to NZ_CP014707 (Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence) position: , mismatch: 3, identity: 0.909

ggagttattgtcactcgtcagtgataattttct	CRISPR spacer
ggagttattgtcactggtcagtgatagtttttt	Protospacer
*************** **********.****.*

43. spacer 2.18|2391761|32|NZ_CP043222|CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

ggttacgcgggcgtctgttaaagagtcctcgt	CRISPR spacer
ggttgcgcgggcgtctgttgaagagtcctcgc	Protospacer
****.**************.***********.

44. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KP987215 (Citrobacter freundii strain 112298 plasmid p112298-KPC, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

45. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP029733 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

46. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP035635 (Enterobacter cloacae strain EN3600 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

47. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP030079 (Enterobacter hormaechei strain 20710 plasmid p5-20710, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

48. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP038468 (Citrobacter sp. SNU WT2 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

49. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP024681 (Citrobacter freundii strain UMH14 plasmid pUMH14_1, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgaata	Protospacer
*************.**************** .

50. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP022492 (Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggggtttcccggaggcattctgatgacaa	Protospacer
*************.*************** *.

51. spacer 2.27|2392310|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP014707 (Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence) position: , mismatch: 3, identity: 0.906

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattgtcactggtcagtgatagtttttt	Protospacer
************** **********.****.*

52. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

53. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

54. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

55. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

56. spacer 2.4|2391821|33|NZ_CP043222|PILER-CR matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 4, identity: 0.879

ggccggggtttcccagaggcattctgatgaaag	CRISPR spacer
ggccggagtttcccggaggcattctgatgaaga	Protospacer
******.*******.****************..

57. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

58. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

59. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

60. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

61. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

62. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

63. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

64. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

65. spacer 2.10|2392187|33|NZ_CP043222|PILER-CR matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 4, identity: 0.879

ggcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
gtcctgccgtcttcttattgaggtcggtaaatc	Protospacer
* ***********.*********** *****.*

66. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

67. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

68. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

69. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

70. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 4, identity: 0.875

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gccggagtttcccggaggcattctgatgaaga	Protospacer
*****.*******.****************..

71. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to CP054337 (Escherichia coli strain SCU-120 plasmid pSCU-120-2, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

72. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MN232192 (Escherichia coli plasmid pGD27-62, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

73. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MF510496 (Klebsiella pneumoniae strain SCKP-LL83 plasmid pMCR_SCKP-LL83, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

74. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052881 (Escherichia coli strain C21 plasmid pC21-4, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

75. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP015837 (Escherichia coli strain MS6198 plasmid pMS6198C, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

76. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP033848 (Escherichia coli strain FDAARGOS_497 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

77. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_LT985263 (Escherichia coli strain 511 plasmid RCS54_p, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

78. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MG825379 (Escherichia coli strain 1108 plasmid p1108-IncY, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

79. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MG288678 (Klebsiella pneumoniae strain F160070 plasmid p160070-MCR, complete sequence) position: , mismatch: 4, identity: 0.875

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcctgccgtcttcttattgaggtcggtaaatc	Protospacer
 ***********.*********** *****.*

80. spacer 1.10|2374121|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to MH001450 (Mycobacterium phage Jeon, complete genome) position: , mismatch: 6, identity: 0.812

atttcaaacactccgggtctgccagcgcctca	CRISPR spacer
agtccatccactccgggtcttccagctcctca	Protospacer
* *.**  ************ ***** *****

81. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 7, identity: 0.781

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cgtctcgaccggtagcttgccggaggcttggt	Protospacer
** ********* ********** . * ***

82. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 7, identity: 0.781

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cgtctcgaccggtagcttgccggaggcttggt	Protospacer
** ********* ********** . * ***

83. spacer 1.3|2373694|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to MN694526 (Marine virus AFVG_250M936, complete genome) position: , mismatch: 7, identity: 0.781

caatcatctgattttttatcattgagagatat	CRISPR spacer
atatcatctaattttttatcattaagaagaat	Protospacer
  *******.*************.***.. **

84. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
ccggcctcggcggcccaatcgctggcgctggc	Protospacer
 *..  ****************.*******.*

85. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tccagcacggcggcccaatcgcgggcgctgcc	Protospacer
 * *.  *************** ******* *

86. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

87. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

88. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

89. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

90. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

91. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

92. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

93. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

94. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

95. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

96. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

97. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

98. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

99. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

100. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

101. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

102. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

103. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 7, identity: 0.781

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tgagcaccggccgcccaatcgccggcgctgtc	Protospacer
  *. *.**** ****************** *

104. spacer 2.27|2392310|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP044178 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1) position: , mismatch: 7, identity: 0.781

gagttattgtcactcgtcagtgataattttct	CRISPR spacer
gagttattattactcgtcagtgaaagcctttt	Protospacer
********.*.************ *...**.*

105. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ctctacgaccgggagctcgccggcatcgaagg	Protospacer
*  . ************.********** .*.

106. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ctctacgaccgggagctcgccggcatcgaagg	Protospacer
*  . ************.********** .*.

107. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccggcgccctggagcttgccggcatcgtgcg	Protospacer
*    ** ** ******************* .

108. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ctctacgaccgggagctcgccggcatcgaagg	Protospacer
*  . ************.********** .*.

109. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccggcgccctggagcttgccggcatcgtgcg	Protospacer
*    ** ** ******************* .

110. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cggctcgactgggtgcttgccgggctgctgac	Protospacer
*********.*** *********  *  **.

111. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 8, identity: 0.75

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccgtcgatcgggagcttgccggcttcacggc	Protospacer
*   ****.*************** **..**

112. spacer 1.8|2373999|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

---cggccgtagcgccgctcagtccgggggatggt	CRISPR spacer
gttcgagc---acgccgctcaagccgggggatggt	Protospacer
   **. *   .*********. ************

113. spacer 1.9|2374060|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028385 (Providencia heimbachae strain 99101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

caattgcgttcttgcttatgcccagcgactta	CRISPR spacer
caattgcgttctggcttacgccctgggtatcg	Protospacer
************ *****.**** * *  *..

114. spacer 2.9|2392126|33|NZ_CP043222|PILER-CR matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
cccggcctcggcggcccaatcgctggcgctggc	Protospacer
  *..  ****************.*******.*

115. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP050076 (Enterobacter kobei strain 070 plasmid p070_B, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

116. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP041049 (Citrobacter sp. CF971 plasmid pBM527-3, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

117. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP022300 (Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .  *************** ******* *

118. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KX912255 (Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

119. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KX863568 (Citrobacter freundii strain AtetA plasmid pLNU-11, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

120. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_022346 (Pseudomonas aeruginosa strain ST308 plasmid pCOL-1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

121. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to LC486677 (Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

122. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KU578314 (Pseudomonas aeruginosa strain 10265 plasmid p10265-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

123. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_KR014106 (Aeromonas hydrophila strain WCHAH01 plasmid pKPC2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

124. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MN539620 (Citrobacter sp. strain 172116965 plasmid p116965-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

125. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_007100 (Pseudomonas aeruginosa plasmid Rms149, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

126. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MN436715 (Klebsiella pneumoniae strain NMI4661/17 plasmid pKRA-GES-5, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

127. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to LC155906 (Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcctgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

128. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP027855 (Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-3, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

129. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP038596 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

130. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_AP019194 (Aeromonas hydrophila strain GSH8-2 plasmid pGSH8-2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

131. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to KM659090 (Achromobacter sp. LM16 plasmid pLM16A1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

132. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_AP019197 (Aeromonas caviae strain GSH8M-1 plasmid pGSH8M-1-2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

133. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to DQ839391 (Uncultured bacterium plasmid pRSB105, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

134. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MK050973 (Citrobacter freundii plasmid pCRE12-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

135. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP028566 (Aeromonas hydrophila subsp. hydrophila strain WCHAH045096 plasmid pKPC2_045096, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

136. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP019671 (Burkholderia cenocepacia strain VC12308 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

137. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP018968 (Escherichia coli strain Ecol_542 plasmid pEC542_KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

138. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_LS998784 (Pseudomonas aeruginosa isolate 1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

139. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP026224 (Aeromonas sp. ASNIH3 plasmid pKPC-cd17, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

140. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MN477223 (Enterobacter cloacae strain 30860 plasmid p30860-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

141. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP040685 (Pseudomonas aeruginosa strain C79 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

142. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_019267 (Serratia marcescens plasmid pRIO-5, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

143. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_011604 (Salmonella enterica subsp. enterica serovar Westhampton plasmid pWES-1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

144. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_005909 (Pseudomonas alcaligenes plasmid pRA2, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

145. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP026703 (Serratia marcescens strain AR_0027 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

146. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_LT992437 (Citrobacter freundii isolate CF121SC21 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

147. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MH909348 (Klebsiella pneumoniae strain A1705 plasmid pA1705-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

148. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MH909350 (Klebsiella pneumoniae strain A1706 plasmid pA1706-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

149. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MF497782 (Morganella morganii strain Mmo-37590cz plasmid pMMO-37590cz, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

150. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MH624130 (Aeromonas taiwanensis strain L186 plasmid p186-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

151. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MH919378 (Citrobacter braakii strain CRE3 plasmid pCRE3-KPC, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

152. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP032895 (Enterobacter kobei strain WCHEK045523 plasmid pKPC2_045523, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

153. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MF168945 (Pseudomonas aeruginosa strain FFUP_PS_35 plasmid pJB35, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcggcccaatcgcgggcgctgcc	Protospacer
 *  .  *************** ******* *

154. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MG558000 (Citrobacter freundii strain Cfr-33795cz plasmid pCfr-33795cz, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcggacggcggcccaatcgcgggcgctgcc	Protospacer
 *. .. *************** ******* *

155. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_047756 (Caulobacter phage Sansa, complete genome) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
ccgcgatcggcggcccgatcggcggcgctatc	Protospacer
 *. .***********.**** *******. *

156. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
gcaggatcggcggcacaatcgtcggcgcattc	Protospacer
.**..********* ******.******   *

157. spacer 1.1|2373572|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.719

cccggttttaccgccaacactcactatattgt	CRISPR spacer
gccacagttaacgccaacactgactatattca	Protospacer
 **.   *** ********** ********

158. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 9, identity: 0.719

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ttcgcggaccgggagttcgccggcatcgtggc	Protospacer
.   . *********.*.*************

159. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 9, identity: 0.719

--cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
accga--ggacggggaacttgccggcatcgtccg	Protospacer
  **.   *** ****.**************  .

160. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.719

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
cccggcgccctggagcttgccggcatcgtccg	Protospacer
*    ** ** ******************  .

161. spacer 1.11|2374182|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cggcggcggacgccgctcagatagccaaaacc	CRISPR spacer
gggcggcggaagccgctcagatagcaggcgat	Protospacer
 ********* ************** .. . .

162. spacer 1.13|2374304|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.719

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
atctttttttatttgttctattgccagtttaa	Protospacer
  .************* ******.**** .

163. spacer 1.13|2374304|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to KX156762 (Staphylococcus phage vB_SauS_IMEP5, complete genome) position: , mismatch: 9, identity: 0.719

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
ctctttttttatttgtacaagtgtcaaacacg	Protospacer
* .*************** * *****.   *

164. spacer 1.21|2374792|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_047851 (Brevibacterium phage LuckyBarnes, complete genome) position: , mismatch: 9, identity: 0.719

ccggatgaaaacgcctacccggaagactacga	CRISPR spacer
gcagatgaaatcgcctaccgggaagagctggc	Protospacer
 *.******* ******** ****** .  *

165. spacer 2.2|2391699|33|NZ_CP043222|PILER-CR matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.727

gcgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
gaatttttttgaactggccgtcgccaccgcaat	Protospacer
* .* **************. ********  ..

166. spacer 2.9|2392126|33|NZ_CP043222|PILER-CR matches to NC_047756 (Caulobacter phage Sansa, complete genome) position: , mismatch: 9, identity: 0.727

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
accgcgatcggcggcccgatcggcggcgctatc	Protospacer
. *. .***********.**** *******. *

167. spacer 2.17|2391700|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

cgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
aatttttttgaactggccgtcgccaccgcaat	Protospacer
 .* **************. ********  ..

168. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP012988 (Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gaaaaagtttcccggagacattctgatgagaa	Protospacer
*  ...*******.***.***********.*.

169. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP045676 (Klebsiella pneumoniae strain WSD411 plasmid pWSD411_3, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gaaaaagtttcccggagacattctgatgagaa	Protospacer
*  ...*******.***.***********.*.

170. spacer 2.19|2391822|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP012993 (Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence) position: , mismatch: 9, identity: 0.719

gccggggtttcccagaggcattctgatgaaag	CRISPR spacer
gaaaaagtttcccggagacattctgatgagaa	Protospacer
*  ...*******.***.***********.*.

171. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_LR723669 (Rhizobium sp. Khangiran2 plasmid 2) position: , mismatch: 9, identity: 0.719

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
catcgacccatgcctccgatactgccgccgga	Protospacer
*.   .*  ******** .*************

172. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MK392366 (Streptomyces phage Janus, complete genome) position: , mismatch: 9, identity: 0.719

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gacaggaagctgcctgccgtactgccgccgat	Protospacer
 . * * ** ***** **************.

173. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP034654 (Xanthomonas vasicola pv. arecae strain NCPPB 2649 plasmid pXCARECAE29, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcgcgcacggcagcccaatcgcgggcgctgcc	Protospacer
 *. .  ****.********** ******* *

174. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP015374 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggccgcccaatcgcgggcgctgcc	Protospacer
 *  .  **** ********** ******* *

175. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NC_016053 (Xanthomonas arboricola pv. pruni str. CFBP 5530 plasmid pXap41, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggccgcccaatcgcgggcgctgcc	Protospacer
 *  .  **** ********** ******* *

176. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_LR594694 (Variovorax sp. WDL1 plasmid 6) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggccgcccaatcgcgggcgctgcc	Protospacer
 *  .  **** ********** ******* *

177. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_MF344578 (Pseudomonas aeruginosa strain 60512 plasmid p60512-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
tcccgcacggcagcccaatcgcgggcgctgcc	Protospacer
 *  .  ****.********** ******* *

178. spacer 2.25|2392188|32|NZ_CP043222|CRISPRCasFinder,CRT matches to HG796856 (Uncultured bacterium plasmid pRGF00250) position: , mismatch: 9, identity: 0.719

gcctgccgtctttttattgaggtctgtaaacc	CRISPR spacer
tcgttttttcttttttttgaggtcagtaaaca	Protospacer
 * * .. ******* ******** ******

179. spacer 2.26|2392249|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MT374854 (Yersinia phage vB_YpM_6, complete genome) position: , mismatch: 9, identity: 0.719

taatcattttgtttaaatcccggatcacctcc	CRISPR spacer
tcgccattttgtttaaatcccgtgtcattatc	Protospacer
* ..****************** .***.. .*

180. spacer 2.26|2392249|32|NZ_CP043222|CRISPRCasFinder,CRT matches to MT374853 (Yersinia phage vB_YpM_5, complete genome) position: , mismatch: 9, identity: 0.719

taatcattttgtttaaatcccggatcacctcc	CRISPR spacer
tcgccattttgtttaaatcccgtgtcattatc	Protospacer
* ..****************** .***.. .*

181. spacer 1.1|2373572|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT937281 (Edwardsiella ictaluri strain RUSVM-1 plasmid pEI2, complete sequence) position: , mismatch: 10, identity: 0.688

cccggttttaccgccaacactcactatattgt	CRISPR spacer
actttttttaccgccaacactccctctaactg	Protospacer
 *.  ***************** ** ** .

182. spacer 1.2|2373633|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 10, identity: 0.688

cggctcgaccgggagcttgccggcatcgtgga	CRISPR spacer
ttcctcggccgggaacttgccggcataacgct	Protospacer
.  ****.******.*********** ..*

183. spacer 1.7|2373938|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017759 (Cupriavidus necator strain NH9 plasmid pENH92, complete sequence) position: , mismatch: 10, identity: 0.688

gagcacttttactgtaggacttgtatgaatct	CRISPR spacer
cagcacttttactgtcggccttgtctccgggg	Protospacer
 ************** ** ***** *  .

184. spacer 1.13|2374304|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
tattttttttatttttactaatgtcttttttt	Protospacer
..************ ***** ****  * ...

185. spacer 1.13|2374304|32|NZ_CP043222|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgttttttttatttgtactattgtcagtaccc	CRISPR spacer
ttctttttttattttgactattgtcaacaata	Protospacer
. .***********  **********..* .

186. spacer 2.9|2392126|33|NZ_CP043222|PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

gacaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
gctggtctcggtggcccaatcgctggcgctgga	Protospacer
* ...  ****.***********.*******.

187. spacer 2.20|2391883|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 10, identity: 0.688

cgaatgcagatgcctcccgtactgccgccgga	CRISPR spacer
gcgccgacgatgccgcccgtgctgccgccggt	Protospacer
  . .*  ****** *****.**********

188. spacer 2.24|2392127|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

acaaaatcggcggcccaatcgccggcgctgac	CRISPR spacer
ctggtctcggtggcccaatcgctggcgctgga	Protospacer
 ...  ****.***********.*******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6039 : 27257

Enterobacteria_phage(48.65%)

integrase,holin,terminase,lysis

attL 15047:15059|attR 27990:28002

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060644711.1\|6039_7452_-\|terminase	PBSX family phage terminase large subunit	Q716H3	Shigella_phage	5.4e-276	99.1
WP_000542583.1\|7893_8073_-	hypothetical protein	Q9AZ02	Salmonella_phage	2.1e-23	93.2
WP_021571708.1\|8074_8317_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	3.7e-36	98.8
WP_001058931.1\|8564_9050_-	GIY-YIG nuclease family protein	C6ZR70	Salmonella_phage	8.5e-88	100.0
WP_001543881.1\|9254_9407_-	hypothetical protein	C6ZR68	Salmonella_phage	1.2e-21	100.0
WP_060644715.1\|9394_9832_-\|lysis	lysis protein	A5VW79	Enterobacteria_phage	2.3e-68	93.1
WP_001167371.1\|9828_10266_-	lysozyme	Q5G8R3	Enterobacteria_phage	2.2e-74	97.9
WP_000738703.1\|10249_10576_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_060644719.1\|10696_10888_-	hypothetical protein	M1E3N9	Enterobacteria_phage	4.7e-26	96.4
WP_001047571.1\|11019_11784_-	antitermination protein	Q5G8R6	Enterobacteria_phage	1.4e-140	97.6
WP_000219137.1\|11780_11960_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	2.1e-23	96.6
WP_000149880.1\|11940_12144_-	protein ninH	A0A1V0E5I5	Salmonella_phage	5.5e-33	100.0
WP_000036321.1\|12140_12365_-	hypothetical protein	I6R0N9	Salmonella_phage	6.3e-38	100.0
WP_060647190.1\|12361_12967_-	recombination protein NinG	G9L693	Escherichia_phage	4.2e-92	94.5
WP_072210018.1\|12959_13304_-	hypothetical protein	NA	NA	NA	NA
WP_060635833.1\|13269_13473_-	protein ninF	A0A220NRM2	Escherichia_phage	2.8e-24	93.1
WP_060635832.1\|13465_13798_-	DUF2591 domain-containing protein	A0A075B8G3	Enterobacteria_phage	6.2e-58	95.5
WP_024240377.1\|13800_13977_-	NinE family protein	K7PH28	Enterobacteria_phage	6.1e-28	100.0
WP_045133258.1\|13973_14384_-	recombination protein NinB	K7PK24	Enterobacteria_phage	1.2e-71	99.3
WP_000344554.1\|14355_14718_-	hypothetical protein	A0A2I6PIG0	Escherichia_phage	4.4e-33	67.9
WP_001579629.1\|14735_14942_-	hypothetical protein	G8C7M4	Escherichia_phage	1.9e-25	94.1
WP_060635831.1\|15018_16899_-	DNA replication protein	K7PK08	Enterobacteria_phage	0.0e+00	99.2
15047:15059	attL	NA	NA	NA	NA
WP_000166207.1\|17836_17983_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_000424167.1\|18017_18296_-	transcriptional regulator	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
WP_000276884.1\|18402_18588_-	hypothetical protein	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
WP_001095984.1\|18668_19319_+	LexA family transcriptional regulator	B1B6L9	Salmonella_phage	5.4e-122	100.0
WP_024139125.1\|19657_19990_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	4.3e-51	93.6
WP_000392424.1\|19998_20448_+	hypothetical protein	I6RSN8	Salmonella_phage	8.7e-71	89.3
WP_023242793.1\|20526_20997_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.1e-87	98.7
WP_072210017.1\|21086_21350_+	hypothetical protein	K7PGS9	Enterobacteria_phage	9.0e-44	100.0
WP_052942523.1\|21616_22324_+	recombinase	K7PKU3	Enterobacteria_phage	1.6e-119	88.5
WP_001253476.1\|22323_22608_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_052942524.1\|22654_22951_+	DUF2856 family protein	A5VWB0	Enterobacteria_phage	1.1e-50	98.0
WP_072104056.1\|22961_23129_+	DUF2737 family protein	Q716F2	Shigella_phage	1.2e-22	96.4
WP_000118152.1\|23125_23425_+	hypothetical protein	Q716F3	Shigella_phage	1.5e-58	100.0
WP_052942525.1\|23426_24017_+	ead/Ea22-like family protein	K7P6J7	Enterobacteria_phage	1.6e-48	50.4
WP_000661511.1\|24020_24320_+	hypothetical protein	NA	NA	NA	NA
WP_000206020.1\|24357_24630_+	hypothetical protein	NA	NA	NA	NA
WP_001531074.1\|24738_24981_+	DUF551 domain-containing protein	NA	NA	NA	NA
WP_001060562.1\|24977_25655_+	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	6.9e-19	29.6
WP_001531071.1\|26093_27257_+\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	1.9e-218	96.1
27990:28002	attR	NA	NA	NA	NA

DBSCAN-SWA_2

237256 : 280866

Enterobacteria_phage(36.21%)

head,portal,lysis,tail,integrase,holin,terminase

attL 236606:236645|attR 276982:277021

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
236606:236645	attL	NA	NA	NA	NA
WP_126790267.1\|237256_237532_+	GtrA family protein	A0A1R3Y5Q2	Salmonella_virus	1.6e-43	96.7
WP_024143049.1\|237603_239526_+	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	0.0e+00	97.2
WP_065314658.1\|239561_241529_-	hypothetical protein	T1SBJ2	Salmonella_phage	3.8e-304	96.6
WP_023277599.1\|241707_242586_-	antirepressor protein ant	I6R977	Salmonella_phage	1.1e-96	78.9
WP_072101348.1\|242648_242822_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_032178570.1\|242910_243147_+	Arc family DNA-binding protein	G0ZNE9	Cronobacter_phage	1.7e-17	60.5
WP_052941096.1\|243143_243353_+	hypothetical protein	I6R975	Salmonella_phage	1.3e-29	97.1
WP_000151196.1\|243327_243513_-	hypothetical protein	I6RSG3	Salmonella_phage	1.1e-08	100.0
WP_000275950.1\|243780_244101_+	hypothetical protein	NA	NA	NA	NA
WP_060647138.1\|244109_246113_-	hypothetical protein	A0A2I7QW93	Vibrio_phage	2.6e-98	36.9
WP_060647136.1\|246112_247519_-	DNA transfer protein	I6RSG0	Salmonella_phage	4.9e-128	56.1
WP_000964882.1\|247528_248221_-	DNA transfer protein	G5DA80	Enterobacteria_phage	9.2e-112	100.0
WP_052862072.1\|248223_248679_-	DUF2824 family protein	B8K1I4	Salmonella_phage	6.7e-87	98.7
WP_103035127.1\|248678_249317_-\|tail	phage tail protein	A8CGD2	Salmonella_phage	4.5e-89	98.6
WP_060635838.1\|249320_250739_-	hypothetical protein	A0A075B8I2	Enterobacteria_phage	3.1e-271	96.6
WP_060635837.1\|250747_251230_-	packaged DNA stabilization protein p27	Q9AYZ5	Salmonella_phage	4.2e-87	99.4
WP_000375637.1\|251204_251390_-	hypothetical protein	Q716G9	Shigella_phage	2.7e-26	100.0
WP_060635836.1\|251432_252704_-\|head	head protein	Q9AYZ7	Salmonella_phage	1.8e-230	95.7
WP_000426729.1\|252715_253600_-	hypothetical protein	Q716H1	Shigella_phage	1.8e-144	99.3
WP_060644709.1\|253613_255740_-\|portal	portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	99.4
WP_060644711.1\|255742_257155_-\|terminase	PBSX family phage terminase large subunit	Q716H3	Shigella_phage	5.4e-276	99.1
WP_000190002.1\|257151_257574_-	hypothetical protein	Q716H4	Shigella_phage	3.6e-74	99.3
WP_000542583.1\|257597_257777_-	hypothetical protein	Q9AZ02	Salmonella_phage	2.1e-23	93.2
WP_021571708.1\|257778_258021_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	3.7e-36	98.8
WP_001058931.1\|258268_258754_-	GIY-YIG nuclease family protein	C6ZR70	Salmonella_phage	8.5e-88	100.0
WP_001543881.1\|258958_259111_-	hypothetical protein	C6ZR68	Salmonella_phage	1.2e-21	100.0
WP_060644715.1\|259098_259536_-\|lysis	lysis protein	A5VW79	Enterobacteria_phage	2.3e-68	93.1
WP_001167371.1\|259532_259970_-	lysozyme	Q5G8R3	Enterobacteria_phage	2.2e-74	97.9
WP_000738703.1\|259953_260280_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_060644719.1\|260400_260592_-	hypothetical protein	M1E3N9	Enterobacteria_phage	4.7e-26	96.4
WP_001047571.1\|260723_261488_-	antitermination protein	Q5G8R6	Enterobacteria_phage	1.4e-140	97.6
WP_000219137.1\|261484_261664_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	2.1e-23	96.6
WP_000149880.1\|261644_261848_-	protein ninH	A0A1V0E5I5	Salmonella_phage	5.5e-33	100.0
WP_000036321.1\|261844_262069_-	hypothetical protein	I6R0N9	Salmonella_phage	6.3e-38	100.0
WP_060647190.1\|262065_262671_-	recombination protein NinG	G9L693	Escherichia_phage	4.2e-92	94.5
WP_072210018.1\|262663_263008_-	hypothetical protein	NA	NA	NA	NA
WP_060635833.1\|262973_263177_-	protein ninF	A0A220NRM2	Escherichia_phage	2.8e-24	93.1
WP_060635832.1\|263169_263502_-	DUF2591 domain-containing protein	A0A075B8G3	Enterobacteria_phage	6.2e-58	95.5
WP_024240377.1\|263504_263681_-	NinE family protein	K7PH28	Enterobacteria_phage	6.1e-28	100.0
WP_045133258.1\|263677_264088_-	recombination protein NinB	K7PK24	Enterobacteria_phage	1.2e-71	99.3
WP_000344554.1\|264059_264422_-	hypothetical protein	A0A2I6PIG0	Escherichia_phage	4.4e-33	67.9
WP_001579629.1\|264439_264646_-	hypothetical protein	G8C7M4	Escherichia_phage	1.9e-25	94.1
WP_060635831.1\|264722_266603_-	DNA replication protein	K7PK08	Enterobacteria_phage	0.0e+00	99.2
WP_000166207.1\|267540_267687_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_000424167.1\|267721_268000_-	transcriptional regulator	Q5G8T2	Enterobacteria_phage	2.5e-44	100.0
WP_000276884.1\|268106_268292_-	hypothetical protein	Q5G8T3	Enterobacteria_phage	5.4e-27	100.0
WP_001095984.1\|268372_269023_+	LexA family transcriptional regulator	B1B6L9	Salmonella_phage	5.4e-122	100.0
WP_024139125.1\|269361_269694_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	4.3e-51	93.6
WP_000392424.1\|269702_270152_+	hypothetical protein	I6RSN8	Salmonella_phage	8.7e-71	89.3
WP_023242793.1\|270230_270701_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.1e-87	98.7
WP_072210017.1\|270790_271054_+	hypothetical protein	K7PGS9	Enterobacteria_phage	9.0e-44	100.0
WP_052942523.1\|271320_272028_+	recombinase	K7PKU3	Enterobacteria_phage	1.6e-119	88.5
WP_001253476.1\|272027_272312_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_052942524.1\|272358_272655_+	DUF2856 family protein	A5VWB0	Enterobacteria_phage	1.1e-50	98.0
WP_072104056.1\|272665_272833_+	DUF2737 family protein	Q716F2	Shigella_phage	1.2e-22	96.4
WP_000118152.1\|272829_273129_+	hypothetical protein	Q716F3	Shigella_phage	1.5e-58	100.0
WP_052942525.1\|273130_273721_+	ead/Ea22-like family protein	K7P6J7	Enterobacteria_phage	1.6e-48	50.4
WP_000661511.1\|273724_274024_+	hypothetical protein	NA	NA	NA	NA
WP_000206020.1\|274061_274334_+	hypothetical protein	NA	NA	NA	NA
WP_001531074.1\|274442_274685_+	DUF551 domain-containing protein	NA	NA	NA	NA
WP_001060562.1\|274681_275359_+	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	6.9e-19	29.6
WP_060647241.1\|275797_276961_+\|integrase	site-specific integrase	A0A2H5BFK7	Salmonella_phage	1.5e-228	99.2
WP_000893218.1\|277166_278417_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.7e-98	48.2
276982:277021	attR	NA	NA	NA	NA
WP_060647239.1\|279813_280866_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.3e-112	58.5

DBSCAN-SWA_3

718130 : 768750

Mycobacterium_phage(30.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001563101.1\|718130_720965_+\|tRNA	isoleucine--tRNA ligase	A0A2K9L260	Tupanvirus	3.8e-79	26.1
WP_000042736.1\|720964_721465_+	lipoprotein signal peptidase	NA	NA	NA	NA
WP_000047269.1\|721619_722069_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_001166423.1\|722071_723022_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
WP_023214725.1\|723221_724424_+	hypothetical protein	NA	NA	NA	NA
WP_000741408.1\|724439_725360_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_000377415.1\|725381_726068_-	response regulator	NA	NA	NA	NA
WP_023215404.1\|726069_727689_-	sensor histidine kinase	NA	NA	NA	NA
WP_000444883.1\|727823_729125_-	oxalacetate decarboxylase subunit beta	NA	NA	NA	NA
WP_103035134.1\|729137_730907_-	sodium-extruding oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_001001155.1\|730922_731162_-	oxaloacetate decarboxylase subunit gamma	NA	NA	NA	NA
WP_000183606.1\|731320_732661_-	citrate/sodium symporter CitN	NA	NA	NA	NA
WP_000934791.1\|732905_733949_+	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
WP_000691461.1\|733978_734272_+	citrate lyase acyl carrier protein	NA	NA	NA	NA
WP_001247811.1\|734268_735138_+	citrate (pro-3S)-lyase subunit beta	NA	NA	NA	NA
WP_000665573.1\|735148_736669_+	citrate lyase subunit alpha	NA	NA	NA	NA
WP_000679050.1\|736668_737220_+	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
WP_001103238.1\|737197_738106_+	triphosphoribosyl-dephospho-CoA synthase CitG	NA	NA	NA	NA
WP_000544045.1\|738285_739107_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_000597270.1\|740144_741293_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	6.8e-51	33.6
WP_001126310.1\|741311_744539_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_000333324.1\|744812_745208_+	carnitine metabolism transcriptional regulator CaiF	NA	NA	NA	NA
WP_000122863.1\|745284_745881_-	carnitine operon protein CaiE	NA	NA	NA	NA
WP_000004385.1\|745990_746776_-	crotonobetainyl-CoA hydratase	NA	NA	NA	NA
WP_023137176.1\|746829_748383_-	crotonobetaine/carnitine-CoA ligase	Q75ZG1	Hepacivirus	6.8e-30	24.8
WP_001016212.1\|748445_749663_-	L-carnitine CoA-transferase	NA	NA	NA	NA
WP_000347134.1\|749774_750917_-	crotonobetainyl-CoA dehydrogenase	NA	NA	NA	NA
WP_000787073.1\|750951_752469_-	L-carnitine/gamma-butyrobetaine antiport BCCT transporter	A0A2I7QNT1	Vibrio_phage	1.4e-08	22.2
WP_000692185.1\|752949_753720_+	electron transfer flavoprotein FixA	NA	NA	NA	NA
WP_001032188.1\|753735_754677_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_001287763.1\|754726_756013_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000203736.1\|756009_756297_+	ferredoxin-like protein FixX	NA	NA	NA	NA
WP_001187057.1\|756443_757784_+	MFS transporter	NA	NA	NA	NA
WP_001172089.1\|757872_758103_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA
WP_000768937.1\|758396_758819_+	hypothetical protein	NA	NA	NA	NA
WP_011805383.1\|758984_760238_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	5.6e-99	48.2
WP_032728035.1\|760709_761726_-\|transposase	IS30-like element IS1394 family transposase	Q9MBM9	Staphylococcus_prophage	3.5e-51	37.5
WP_052905207.1\|761903_762410_-	AAA family ATPase	NA	NA	NA	NA
WP_011805383.1\|762496_763750_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	5.6e-99	48.2
WP_032728035.1\|764221_765238_-\|transposase	IS30-like element IS1394 family transposase	Q9MBM9	Staphylococcus_prophage	3.5e-51	37.5
WP_052905207.1\|765415_765922_-	AAA family ATPase	NA	NA	NA	NA
WP_011805383.1\|766008_767262_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	5.6e-99	48.2
WP_032728035.1\|767733_768750_-\|transposase	IS30-like element IS1394 family transposase	Q9MBM9	Staphylococcus_prophage	3.5e-51	37.5

DBSCAN-SWA_4

2052801 : 2108769

Cronobacter_phage(61.36%)

head,capsid,portal,tail,integrase,holin,tRNA,transposase,terminase

attL 2046868:2046888|attR 2094846:2094866

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2046868:2046888	attL	NA	NA	NA	NA
WP_000478462.1\|2052801_2054370_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.2e-12	33.5
WP_000983434.1\|2054366_2055014_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000213763.1\|2055245_2056013_+	siderophore-interacting protein	NA	NA	NA	NA
WP_001145216.1\|2056223_2057261_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	6.6e-122	64.7
WP_000568369.1\|2057264_2057831_-	hypothetical protein	Q4ZA70	Staphylococcus_virus	3.0e-20	35.0
WP_000102874.1\|2057847_2058429_-	phage repressor protein CI	F1BUS8	Erwinia_phage	2.5e-33	39.8
WP_001247709.1\|2058564_2058786_+	hypothetical protein	NA	NA	NA	NA
WP_000460877.1\|2058816_2059320_+	hypothetical protein	F1BUN6	Cronobacter_phage	3.5e-60	72.5
WP_000643375.1\|2059329_2059557_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_000996838.1\|2059546_2059972_+	hypothetical protein	F1BUN5	Cronobacter_phage	7.6e-24	50.4
WP_000022787.1\|2059971_2060373_+	hypothetical protein	F1BUN2	Cronobacter_phage	3.2e-48	66.2
WP_071601531.1\|2060518_2060695_+	DUF2732 family protein	NA	NA	NA	NA
WP_000422609.1\|2060685_2061282_+	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	3.8e-74	72.3
WP_000153510.1\|2061278_2061608_+	DUF3850 domain-containing protein	Q2P9X4	Enterobacteria_phage	2.5e-11	44.0
WP_000279405.1\|2061597_2062458_+	DNA adenine methylase	F1BUN1	Cronobacter_phage	1.3e-131	82.7
WP_000170880.1\|2062454_2064476_+	replication endonuclease	F1BUM9	Cronobacter_phage	9.4e-298	74.8
WP_000353141.1\|2064595_2064802_+	hypothetical protein	NA	NA	NA	NA
WP_001552031.1\|2064775_2065099_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	8.0e-50	92.3
WP_000038207.1\|2065095_2066157_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	5.1e-162	77.1
WP_001151944.1\|2066153_2067929_-	hypothetical protein	F1BUM5	Cronobacter_phage	2.2e-290	83.1
WP_000018798.1\|2068089_2068890_+\|capsid	phage capsid scaffolding protein	F1BUM4	Cronobacter_phage	3.2e-76	54.8
WP_000550496.1\|2068951_2069974_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.1e-158	81.2
WP_001218534.1\|2069977_2070682_+\|terminase	terminase	F1BUM0	Cronobacter_phage	1.0e-86	67.4
WP_000398492.1\|2070685_2070880_+	hypothetical protein	Q8W634	Enterobacteria_phage	3.3e-11	58.6
WP_000447490.1\|2070940_2071429_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	4.3e-63	81.3
WP_000084220.1\|2071425_2071932_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	5.2e-64	69.8
WP_000560081.1\|2071928_2072636_+	hypothetical protein	F1BUL6	Cronobacter_phage	3.4e-101	76.5
WP_000220205.1\|2072632_2073760_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	3.3e-175	83.7
WP_000166743.1\|2073756_2074212_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
WP_001154425.1\|2074221_2074515_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
WP_000175560.1\|2074511_2074853_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
WP_000376374.1\|2074852_2075185_+	hypothetical protein	F1BUL2	Cronobacter_phage	2.0e-35	70.0
WP_001270304.1\|2075156_2075345_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.5e-21	79.0
WP_000411340.1\|2075331_2075589_+	hypothetical protein	A5X9I7	Aeromonas_virus	3.6e-21	63.4
WP_000811089.1\|2075776_2077747_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	1.6e-254	67.4
WP_001002797.1\|2077743_2078073_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
WP_000136922.1\|2078069_2079254_+	hypothetical protein	F1BUK6	Cronobacter_phage	2.0e-178	78.1
WP_001001827.1\|2079246_2079834_+	hypothetical protein	F1BUK5	Cronobacter_phage	2.1e-88	81.5
WP_000083767.1\|2079843_2081856_+\|tail	tail protein	F1BUK3	Cronobacter_phage	2.1e-148	81.2
WP_001215677.1\|2081858_2082389_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	4.4e-13	32.4
WP_000267951.1\|2082378_2083104_+	hypothetical protein	F1BUK1	Cronobacter_phage	6.6e-68	56.4
WP_000200796.1\|2083075_2083621_+	hypothetical protein	F1BUJ9	Cronobacter_phage	1.4e-59	72.0
WP_052945080.1\|2083623_2085324_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.3e-223	81.3
WP_071530430.1\|2085482_2085704_+	hypothetical protein	NA	NA	NA	NA
WP_000237776.1\|2086496_2087003_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_001519776.1\|2087126_2088974_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_000918865.1\|2089123_2090869_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
WP_001144069.1\|2091104_2091320_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_001264396.1\|2091547_2092561_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	59.5
WP_001272785.1\|2092783_2093401_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_000355776.1\|2093507_2093867_+	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
WP_001281933.1\|2093964_2094786_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000708456.1\|2094889_2096131_-	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	2.5e-91	51.4
2094846:2094866	attR	NA	NA	NA	NA
WP_001125344.1\|2096193_2096808_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_000046225.1\|2097049_2098351_+	inorganic triphosphatase	NA	NA	NA	NA
WP_000188297.1\|2098468_2101312_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_000867682.1\|2101359_2102793_+	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	A0A1B1IUK5	uncultured_Mediterranean_phage	8.8e-40	29.0
WP_106086611.1\|2102952_2103171_-	type I toxin-antitoxin system Ibs family toxin	NA	NA	NA	NA
WP_000342873.1\|2103251_2104931_-	flotillin family protein	NA	NA	NA	NA
WP_060647178.1\|2104949_2105570_-	YqiJ family protein	NA	NA	NA	NA
WP_000928927.1\|2105827_2106037_+	cell surface composition regulator GlgS	NA	NA	NA	NA
WP_000566826.1\|2106110_2106407_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_001076978.1\|2106843_2107497_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.6e-44	43.8
WP_086011183.1\|2107513_2108769_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.2e-18	34.5

DBSCAN-SWA_5

3095031 : 3104203

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|3095031_3095979_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
WP_000824858.1\|3095962_3096694_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|3096674_3096782_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|3096841_3097573_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|3097795_3099481_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|3099477_3100197_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|3100243_3100711_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001221798.1\|3100767_3101298_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703136.1\|3101469_3101928_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
WP_000195345.1\|3102169_3104203_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_6

3171432 : 3181939

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111835.1\|3171432_3172836_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
WP_000981469.1\|3173013_3173907_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697850.1\|3174283_3175369_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.4e-103	53.9
WP_001023663.1\|3175368_3176268_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_024132299.1\|3176315_3177194_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.5e-108	65.2
WP_000973712.1\|3177194_3177746_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.9e-52	58.0
WP_000018225.1\|3177751_3178726_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648783.1\|3178741_3179515_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565904.1\|3179519_3180599_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	2.3e-16	24.5
WP_000126349.1\|3180625_3181939_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_7

3568943 : 3575605

Salmonella_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000230462.1\|3568943_3569750_-	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	4.6e-14	27.4
WP_001128869.1\|3569751_3570744_-	peptide ABC transporter ATP-binding protein SapD	NA	NA	NA	NA
WP_001146150.1\|3570743_3571634_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_001605109.1\|3571770_3572157_+	DUF4102 domain-containing protein	K7PLT1	Enterobacteria_phage	1.6e-28	59.4
WP_001605114.1\|3572456_3573179_-	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	4.3e-35	38.9
WP_001096568.1\|3573649_3573832_+	hypothetical protein	S4TSR3	Salmonella_phage	1.0e-22	77.6
WP_001605117.1\|3574081_3574222_+	hypothetical protein	A0A0U2KD26	Escherichia_phage	6.5e-09	77.1
WP_001605118.1\|3574260_3574560_+	putative pertussis-like toxin subunit	A0A0U2KD26	Escherichia_phage	3.2e-13	54.3
WP_000727927.1\|3574486_3574912_+	subtilase	NA	NA	NA	NA
WP_077946977.1\|3575290_3575605_+	recombinase family protein	A0A1S6L009	Salmonella_phage	2.8e-39	85.1

DBSCAN-SWA_8

4045552 : 4099330

Salmonella_phage(52.46%)

head,capsid,portal,tail,integrase,holin,plate,tRNA,terminase,protease

attL 4052530:4052545|attR 4095231:4095246

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000497451.1\|4045552_4045792_+	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
WP_001529135.1\|4046664_4047474_+	cytolethal distending toxin S-CDT	A5LH53	Enterobacteria_phage	2.1e-62	50.0
WP_001277616.1\|4047546_4047924_+	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
WP_000158843.1\|4048071_4048614_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	6.2e-71	67.0
WP_000733630.1\|4048806_4049535_-	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	1.6e-61	52.5
WP_000275700.1\|4049551_4049965_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	4.2e-19	38.6
WP_000917280.1\|4051011_4052136_-	type III secretion system effector SopF	NA	NA	NA	NA
4052530:4052545	attL	NA	NA	NA	NA
WP_148910460.1\|4052581_4052794_-	isocitrate dehydrogenase	Q77Z09	Phage_21	9.6e-20	90.6
WP_000334550.1\|4053047_4053719_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-80	61.3
WP_023171144.1\|4053711_4054980_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	7.3e-240	96.0
WP_023171145.1\|4054982_4055402_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.8e-36	59.1
WP_077909836.1\|4055738_4055951_-	hypothetical protein	A0A1B0V844	Salmonella_phage	9.3e-07	62.9
WP_023171148.1\|4056075_4057209_+	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	1.6e-36	33.0
WP_023171149.1\|4057246_4057459_-	hypothetical protein	F1BUK1	Cronobacter_phage	1.6e-11	60.9
WP_094445164.1\|4057448_4058054_-\|tail	tail fiber assembly protein	Q8HAB3	Salmonella_phage	1.4e-100	93.1
WP_023244258.1\|4058023_4059277_-	hypothetical protein	A0A1S6KZZ0	Salmonella_phage	4.6e-178	95.6
WP_023171039.1\|4059263_4059851_-	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	1.4e-113	99.0
WP_023215805.1\|4059853_4060933_-\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	1.2e-203	99.2
WP_000605051.1\|4060925_4061339_-	hypothetical protein	A0A192Y6D0	Salmonella_phage	3.1e-75	100.0
WP_001273648.1\|4061343_4061877_-\|plate	phage baseplate assembly protein	A0A192Y8K5	Salmonella_phage	8.4e-97	100.0
WP_001066631.1\|4061876_4062935_-	hypothetical protein	A0A192Y7L7	Salmonella_phage	6.6e-202	99.7
WP_023171041.1\|4062931_4064272_-\|tail	tail/DNA circulation protein	A0A192Y5U9	Salmonella_phage	1.1e-249	99.3
WP_023171042.1\|4064305_4066234_-\|tail	phage tail tape measure protein	A0A192Y6D8	Salmonella_phage	0.0e+00	99.1
WP_000588852.1\|4066318_4066645_-\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
WP_000515952.1\|4066641_4066998_-\|tail	tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
WP_060646850.1\|4066997_4068494_-\|tail	phage tail protein	Q8HAC5	Salmonella_phage	1.2e-276	99.2
WP_000497755.1\|4068483_4068648_-	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	8.4e-24	96.3
WP_023171043.1\|4069210_4069723_-	hypothetical protein	Q8HAC8	Salmonella_phage	6.2e-81	87.1
WP_023171044.1\|4069694_4070108_-\|head	phage head closure protein	A0A192Y6C2	Salmonella_phage	6.0e-50	74.8
WP_000886224.1\|4070119_4070443_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	2.2e-31	57.4
WP_023171045.1\|4070442_4070667_-	hypothetical protein	K7PHI6	Enterobacteria_phage	2.5e-10	66.0
WP_023171046.1\|4070710_4071928_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	4.6e-199	88.9
WP_023171047.1\|4071937_4072786_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	7.5e-132	88.2
WP_023171048.1\|4072799_4074104_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	1.9e-219	86.6
WP_077909829.1\|4074103_4075846_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	5.3e-140	44.5
WP_023171050.1\|4075799_4076264_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.7e-48	62.1
WP_024147208.1\|4076396_4076741_-	HNH endonuclease	K7P7P6	Enterobacteria_phage	8.8e-47	73.9
WP_001070544.1\|4076875_4077103_-	hypothetical protein	NA	NA	NA	NA
WP_000495545.1\|4077199_4077577_-	hypothetical protein	Q6UAR9	Klebsiella_phage	2.2e-43	68.5
WP_023171052.1\|4077619_4078159_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	1.3e-07	49.3
WP_023171053.1\|4078155_4078770_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.4e-108	93.1
WP_000250465.1\|4078769_4079051_-\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	8.2e-19	51.1
WP_023171055.1\|4079037_4079424_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	8.9e-56	92.2
WP_023171056.1\|4079574_4080498_+	hypothetical protein	A0A1B5FPA3	Escherichia_phage	1.6e-42	56.4
WP_023171057.1\|4080604_4081435_-	antitermination protein	A0A1B5FPA5	Escherichia_phage	5.0e-56	43.3
WP_024147207.1\|4081465_4082455_-	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	1.5e-192	98.8
WP_023171059.1\|4082462_4083323_-	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	2.7e-161	98.6
WP_023171060.1\|4083339_4083729_-	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	7.1e-69	97.7
WP_023171061.1\|4083725_4084619_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	8.7e-163	93.9
WP_023171062.1\|4084618_4085101_-	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	1.6e-86	98.8
WP_000104924.1\|4085102_4086062_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.6e-117	80.9
WP_000620702.1\|4086058_4086283_-	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
WP_023244168.1\|4086279_4087422_-	antirepressor	A0A1C9IHV9	Salmonella_phage	6.3e-182	87.4
WP_000509731.1\|4087418_4087973_-	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
WP_001191666.1\|4088001_4088226_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_071591199.1\|4088164_4088350_-	hypothetical protein	NA	NA	NA	NA
WP_001020640.1\|4088323_4089019_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	4.6e-127	99.6
WP_000997190.1\|4089833_4090205_+	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
WP_023171064.1\|4090262_4091090_+	YfdQ family protein	Q8HAA2	Salmonella_phage	4.1e-151	98.5
WP_000008351.1\|4091226_4091766_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
WP_100514545.1\|4091893_4092568_+	ead/Ea22-like family protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	5.4e-40	94.3
WP_023171066.1\|4092567_4093041_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.1e-67	78.8
WP_000089141.1\|4093801_4094038_+	excisionase	NA	NA	NA	NA
WP_000741325.1\|4094027_4095170_+\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	8.2e-174	80.3
WP_000444509.1\|4095283_4096534_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
4095231:4095246	attR	NA	NA	NA	NA
WP_001249416.1\|4096705_4097371_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000825956.1\|4097367_4097697_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_000476063.1\|4097708_4098170_+	NUDIX hydrolase	NA	NA	NA	NA
WP_060647024.1\|4098223_4099330_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_9

4250551 : 4293916

Salmonella_phage(48.0%)

lysis,tail,integrase,terminase,protease

attL 4250283:4250342|attR 4292758:4292835

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4250283:4250342	attL	NA	NA	NA	NA
WP_001670820.1\|4250551_4250818_+	hypothetical protein	A0A0M3ULK3	Salmonella_phage	7.3e-33	78.4
WP_000503667.1\|4250874_4251522_+	hypothetical protein	NA	NA	NA	NA
WP_001670723.1\|4251564_4251762_-	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	1.4e-09	97.0
WP_127913510.1\|4251944_4252190_+	hypothetical protein	NA	NA	NA	NA
WP_000033280.1\|4252387_4252780_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	8.5e-14	37.4
WP_000370530.1\|4252889_4253498_-	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	1.1e-31	44.7
WP_071786695.1\|4253560_4253746_-	hypothetical protein	NA	NA	NA	NA
WP_000421108.1\|4253994_4254513_-\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	2.0e-47	53.8
WP_060647010.1\|4254527_4256060_-	hypothetical protein	S4TP62	Salmonella_phage	1.8e-128	66.5
WP_000049939.1\|4256059_4256740_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	5.5e-125	96.0
WP_001197089.1\|4256736_4257936_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	5.5e-213	96.7
WP_060647008.1\|4257936_4258290_-	hypothetical protein	A0A0M4R339	Salmonella_phage	8.7e-58	94.9
WP_000301078.1\|4258289_4259042_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	9.7e-91	69.8
WP_000931859.1\|4259160_4259616_+	hypothetical protein	NA	NA	NA	NA
WP_000819157.1\|4259699_4260032_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	1.7e-23	69.1
WP_000081749.1\|4260028_4261096_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	2.0e-174	91.5
WP_060647006.1\|4261098_4261401_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.6e-52	99.0
WP_060647005.1\|4261400_4261976_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	5.9e-96	99.0
WP_000990866.1\|4261975_4263985_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	0.0e+00	95.2
WP_024131618.1\|4263974_4264151_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	4.7e-12	72.9
WP_000389049.1\|4264162_4264615_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	1.3e-61	78.7
WP_000257262.1\|4264618_4265059_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.5e-54	73.3
WP_023972347.1\|4265070_4266216_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	5.9e-164	74.8
WP_060647002.1\|4266219_4266765_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	5.7e-48	50.8
WP_001526520.1\|4266757_4267162_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	4.1e-43	69.2
WP_023972349.1\|4267161_4267671_-	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	8.5e-22	40.7
WP_023972350.1\|4267667_4268078_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	2.5e-32	57.4
WP_023972351.1\|4268046_4268415_-	hypothetical protein	NA	NA	NA	NA
WP_060647000.1\|4268464_4269412_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	3.6e-98	54.5
WP_023972353.1\|4269423_4269927_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	5.2e-32	47.0
WP_023972354.1\|4269938_4271216_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.6e-77	42.8
WP_001526527.1\|4271267_4271801_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	5.5e-48	56.9
WP_023972355.1\|4271871_4273341_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.1e-157	55.7
WP_060646998.1\|4273380_4274799_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	3.4e-185	69.7
WP_023972357.1\|4274764_4275517_-	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	2.6e-11	55.2
WP_024156461.1\|4275580_4275769_-	DUF826 domain-containing protein	NA	NA	NA	NA
WP_023972360.1\|4276081_4276549_-\|lysis	lysis protein	S4TNN7	Salmonella_phage	2.5e-60	80.6
WP_023972361.1\|4276545_4277457_-	site-specific DNA-methyltransferase	A0A088FRS2	Escherichia_phage	3.2e-88	53.0
WP_060646996.1\|4277453_4277951_-	lysozyme	A0A1R3Y5W5	Salmonella_virus	6.3e-54	63.4
WP_001526513.1\|4277928_4278231_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000658037.1\|4278433_4278622_-	hypothetical protein	NA	NA	NA	NA
WP_060646994.1\|4279014_4279593_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	2.4e-44	52.0
WP_060646992.1\|4279879_4280476_-	DUF1367 family protein	H9C173	Pectobacterium_phage	4.2e-81	73.2
WP_000474096.1\|4280544_4280736_-	hypothetical protein	NA	NA	NA	NA
WP_001129735.1\|4280919_4281258_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.7e-50	86.6
WP_000180135.1\|4281257_4281428_-	hypothetical protein	I6S1S6	Salmonella_phage	6.3e-06	87.5
WP_001037052.1\|4281424_4282027_-	adenine methylase	G9L699	Escherichia_phage	1.7e-98	87.3
WP_000918617.1\|4282019_4282268_-	hypothetical protein	NA	NA	NA	NA
WP_000130738.1\|4282271_4282952_-	hypothetical protein	NA	NA	NA	NA
WP_000074839.1\|4282989_4284378_-	DNA helicase	Q76H51	Enterobacteria_phage	1.2e-105	47.1
WP_000063056.1\|4284374_4285355_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	2.3e-44	80.6
WP_001195066.1\|4285357_4285582_-	hypothetical protein	H9C163	Pectobacterium_phage	1.0e-08	44.7
WP_001643782.1\|4285604_4286051_-	hypothetical protein	H9C162	Pectobacterium_phage	5.5e-25	50.4
WP_001526889.1\|4285985_4286201_+	hypothetical protein	NA	NA	NA	NA
WP_001670726.1\|4286115_4286349_-	helix-turn-helix transcriptional regulator	A0A0U2S629	Escherichia_phage	6.2e-12	48.6
WP_000467661.1\|4286447_4286912_+	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	2.7e-35	51.7
WP_000387662.1\|4287596_4287920_+	hypothetical protein	NA	NA	NA	NA
WP_001192832.1\|4287927_4288173_+	hypothetical protein	A0A1B1W282	Salmonella_phage	3.5e-13	53.8
WP_060646990.1\|4288202_4290476_+	hypothetical protein	H9C157	Pectobacterium_phage	6.1e-104	35.0
WP_000205292.1\|4290472_4291027_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.3e-47	59.3
WP_000916251.1\|4291029_4291212_+	hypothetical protein	NA	NA	NA	NA
WP_024131616.1\|4291261_4291459_+	hypothetical protein	H9C154	Pectobacterium_phage	8.3e-10	58.5
WP_000196402.1\|4291424_4291649_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533596.1\|4291649_4292669_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	1.2e-91	53.5
WP_000374046.1\|4293256_4293916_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
4292758:4292835	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4738221 : 4766017

Salmonella_phage(38.89%)

holin,head,portal,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053259004.1\|4738221_4740219_-	hypothetical protein	Q76H13	Enterobacteria_phage	0.0e+00	87.4
WP_053259008.1\|4740218_4741541_-	DNA transfer protein	A0A220NR03	Salmonella_phage	3.1e-233	97.3
WP_023206221.1\|4741583_4742273_-	hypothetical protein	B9UDK9	Salmonella_phage	2.3e-102	99.6
WP_023206220.1\|4742275_4742731_-	DUF2824 family protein	E7C9U3	Salmonella_phage	5.2e-87	99.3
WP_060635839.1\|4742730_4743369_-	hypothetical protein	A8CGD2	Salmonella_phage	1.6e-89	99.1
WP_060635838.1\|4743372_4744791_-	hypothetical protein	A0A075B8I2	Enterobacteria_phage	3.1e-271	96.6
WP_060635837.1\|4744799_4745282_-	packaged DNA stabilization protein p27	Q9AYZ5	Salmonella_phage	4.2e-87	99.4
WP_000375637.1\|4745256_4745442_-	hypothetical protein	Q716G9	Shigella_phage	2.7e-26	100.0
WP_060635836.1\|4745484_4746756_-\|head	head protein	Q9AYZ7	Salmonella_phage	1.8e-230	95.7
WP_000426729.1\|4746767_4747652_-	hypothetical protein	Q716H1	Shigella_phage	1.8e-144	99.3
WP_060644709.1\|4747665_4749792_-\|portal	portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	99.4
WP_000190002.1\|4751202_4751625_-	hypothetical protein	Q716H4	Shigella_phage	3.6e-74	99.3
WP_000542583.1\|4751648_4751828_-	hypothetical protein	Q9AZ02	Salmonella_phage	2.1e-23	93.2
WP_021571708.1\|4751829_4752072_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	3.7e-36	98.8
WP_001058931.1\|4752319_4752805_-	GIY-YIG nuclease family protein	C6ZR70	Salmonella_phage	8.5e-88	100.0
WP_001543881.1\|4753009_4753162_-	hypothetical protein	C6ZR68	Salmonella_phage	1.2e-21	100.0
WP_060644715.1\|4753149_4753587_-\|lysis	lysis protein	A5VW79	Enterobacteria_phage	2.3e-68	93.1
WP_001167371.1\|4753583_4754021_-	lysozyme	Q5G8R3	Enterobacteria_phage	2.2e-74	97.9
WP_000738703.1\|4754004_4754331_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_060644719.1\|4754451_4754643_-	hypothetical protein	M1E3N9	Enterobacteria_phage	4.7e-26	96.4
WP_000219137.1\|4755534_4755714_-	hypothetical protein	A0A1V0E5I7	Salmonella_phage	2.1e-23	96.6
WP_000149880.1\|4755694_4755898_-	protein ninH	A0A1V0E5I5	Salmonella_phage	5.5e-33	100.0
WP_000036321.1\|4755894_4756119_-	hypothetical protein	I6R0N9	Salmonella_phage	6.3e-38	100.0
WP_060647190.1\|4756115_4756721_-	recombination protein NinG	G9L693	Escherichia_phage	4.2e-92	94.5
WP_072210018.1\|4756713_4757058_-	hypothetical protein	NA	NA	NA	NA
WP_060635833.1\|4757023_4757227_-	protein ninF	A0A220NRM2	Escherichia_phage	2.8e-24	93.1
WP_060635832.1\|4757219_4757552_-	DUF2591 domain-containing protein	A0A075B8G3	Enterobacteria_phage	6.2e-58	95.5
WP_024240377.1\|4757554_4757731_-	NinE family protein	K7PH28	Enterobacteria_phage	6.1e-28	100.0
WP_045133258.1\|4757727_4758138_-	recombination protein NinB	K7PK24	Enterobacteria_phage	1.2e-71	99.3
WP_000344554.1\|4758109_4758472_-	hypothetical protein	A0A2I6PIG0	Escherichia_phage	4.4e-33	67.9
WP_001579629.1\|4758489_4758696_-	hypothetical protein	G8C7M4	Escherichia_phage	1.9e-25	94.1
WP_000166207.1\|4761586_4761733_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_148910465.1\|4762491_4762794_+	helix-turn-helix domain-containing protein	B1B6L9	Salmonella_phage	2.6e-42	100.0
WP_148910466.1\|4764262_4764793_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	1.7e-86	98.7
WP_148910467.1\|4765368_4765596_+	hypothetical protein	Q716E7	Shigella_phage	4.0e-24	78.5
WP_148910469.1\|4765526_4765769_+	hypothetical protein	G5DA86	Enterobacteria_phage	2.0e-21	100.0
WP_148910468.1\|4765678_4766017_+	hypothetical protein	Q8VNQ0	Enterobacteria_phage	8.6e-39	72.1

Anti-CRISPR protein detection

Acr_ID: NZ_CP043222.1|WP_001247709.1|2058564_2058786_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP043222.1|WP_001247709.1|2058564_2058786_+|hypothetical-protein

2058564_2058786_+

73 aa aa

2052801-2108769

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP043222_2	TypeI-E	2.2\|2391699\|33\|NZ_CP043222\|PILER-CR	2391699-2391731	33	2083273-2083305	0
NZ_CP043222_2	TypeI-E	2.17\|2391700\|32\|NZ_CP043222\|CRISPRCasFinder,CRT	2391700-2391731	32	2083274-2083305	0

1. spacer 2.2|2391699|33|NZ_CP043222|PILER-CR matches to NZ_CP043222 position: 2083273-2083305, mismatch: 0

gcgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
gcgtatttttgaactggccagcgccaccgatgc	Protospacer
*********************************

2. spacer 2.17|2391700|32|NZ_CP043222|CRISPRCasFinder,CRT matches to NZ_CP043222 position: 2083274-2083305, mismatch: 0

cgtatttttgaactggccagcgccaccgatgc	CRISPR spacer
cgtatttttgaactggccagcgccaccgatgc	Protospacer
********************************

2. NZ_CP043223

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

180427 : 190053

Stx2-converting_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001682306.1\|180427_181351_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.4e-168	94.5
WP_001000406.1\|181667_183203_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	4.8e-262	88.1
WP_000609174.1\|183252_183600_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-59	95.7
WP_001201739.1\|183596_183980_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.1e-13	36.3
WP_148910474.1\|184375_186055_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	3.4e-67	31.0
WP_011805383.1\|186047_187301_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	5.6e-99	48.2
WP_000114859.1\|187707_188871_-	hypothetical protein	A0A1P8DTT7	Salmonella_phage	1.3e-17	32.1
WP_001121575.1\|189240_190053_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	3.0e-45	38.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043222

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

2. NZ_CP043223

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection