CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042912	Mariniblastus fucicola strain FC18 chromosome, complete genome	11 crisprs	csa3,WYL,DinG,cas3,RT,cas2,cas1,cas4,cas7,cas8c,cas5	2	7	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042912_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_1

1680196-1680965

Orphan

Consensus_repeat	Method
GAAGCCCAGCGTCTGGCCGA	CRT

12 spacers

The CRISPR arrays of NZ_CP042912_1

>merge|NZ_CP042912|1|1680196-1680965|CRT
GAAGCCCAGCGTCTGGCCGACGAAGCCGAAGCTCAACTTCTCGCCGACGAAGCCGAAGCTCAGCGTCTTGTTGATGAAGCGGAAGCCCAGCGTCTGGCCGATGAACAGGCTGAACTTGAAGCCAAGCAAGAAGCGGAAGCCGCCGAAGCCCAGCGTCTGGCCGACGAAGCCGAAGCTCAACGTCTCGCGGATGAAGCGGAAGCCAAACGTCTGGCCGATGAACAGGCTGAACTCGAAGCCAAGCAAGAAGCGGAAGCTGCCGAAGCCCAGCGTCTGGCCGACGAAGCCGAAGCTCAACGTCTCGCTGATGAAGCGGAAGCCCAGCGTCTGGCCGATGAACAGGCTGAACTTGAAGCCAAGCAAGAGGCGGAAGCCGCCGAAGCCCAGCGTCTTGCCGACGAAGCCGAAGCTCAACGTCTCGTTGATGAAGCGGAAGCCCAGCGTCTGGCCGATGAACAGGCTGAGCTCGAAGCCAAGCAAGAAGCGGAAGCTGCCGAAGCTCAGCGTCTTGCCGACGAAGCTGAAGCTCAACGTCTCGCGGATGAAGCGGAAGCCAAACGTCTGGCCGATGAACAGGCTGAACTCGAAGCCAAACAAGAAGCGGAAGCCGCCGAAGCTCAGCGTCTGGCCGACGAAGCCGAAGCCCAGCGTCTCGCCGATGAAGCGGAAGCCAAACGTCTGGCGGATGAACAGGCTGAACTCGAAGCCAAGCAAGCCGCTGAAGCATTGCGATTGGCGGAAGAAGCTGCCGAAGCTCAGCGTCGTGCGGA

>NZ_CP042912|1|1|1680196-1680965|CRT
GAAGCCCAGCGTCTGGCCGA	CGAAGCCGAAGCTCAACTTCTCGCCGACGAAGCCGAAGCTCAGCGTCTTGTTGATGAAGCG
GAAGCCCAGCGTCTGGCCGA	TGAACAGGCTGAACTTGAAGCCAAGCAAGAAGCGGAAGCCGCC
GAAGCCCAGCGTCTGGCCGA	CGAAGCCGAAGCTCAACGTCTCGCGGATGAAGCG
GAAGCCAAACGTCTGGCCGA	TGAACAGGCTGAACTCGAAGCCAAGCAAGAAGCGGAAGCTGCC
GAAGCCCAGCGTCTGGCCGA	CGAAGCCGAAGCTCAACGTCTCGCTGATGAAGCG
GAAGCCCAGCGTCTGGCCGA	TGAACAGGCTGAACTTGAAGCCAAGCAAGAGGCGGAAGCCGCC
GAAGCCCAGCGTCTTGCCGA	CGAAGCCGAAGCTCAACGTCTCGTTGATGAAGCG
GAAGCCCAGCGTCTGGCCGA	TGAACAGGCTGAGCTCGAAGCCAAGCAAGAAGCGGAAGCTGCC
GAAGCTCAGCGTCTTGCCGA	CGAAGCTGAAGCTCAACGTCTCGCGGATGAAGCG
GAAGCCAAACGTCTGGCCGA	TGAACAGGCTGAACTCGAAGCCAAACAAGAAGCGGAAGCCGCC
GAAGCTCAGCGTCTGGCCGA	CGAAGCCGAAGCCCAGCGTCTCGCCGATGAAGCG
GAAGCCAAACGTCTGGCGGA	TGAACAGGCTGAACTCGAAGCCAAGCAAGCCGCTGAAGCATTGCGATTGGCGGAAGAAGCTGCC
GAAGCTCAGCGTCGTGCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_087149646.1\|1682297_1682675_+\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP042912.1\|WP_075084380.1\|1686919_1689949_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_CP042912.1\|WP_075084389.1\|1674854_1675523_-\|50S-ribosomal-protein-L4	unknown	unknown	gnl\|CDD\|235404
NZ_CP042912.1\|WP_075084391.1\|1673604_1674462_-\|50S-ribosomal-protein-L2	unknown	unknown	gnl\|CDD\|236488
NZ_CP042912.1\|WP_075084378.1\|1691407_1692556_+\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|376451
NZ_CP042912.1\|WP_168211075.1\|1678858_1679014_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075084427.1\|1672934_1673282_-\|50S-ribosomal-protein-L22	unknown	unknown	gnl\|CDD\|234793
NZ_CP042912.1\|WP_162273946.1\|1693803_1694436_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP042912.1\|WP_162273947.1\|1677429_1678743_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP042912.1\|WP_075084392.1\|1673329_1673599_-\|30S-ribosomal-protein-S19	unknown	unknown	gnl\|CDD\|178985
NZ_CP042912.1\|WP_075084377.1\|1692667_1693003_+\|hydroxyisourate-hydrolase	unknown	unknown	gnl\|CDD\|100114
NZ_CP042912.1\|WP_075084382.1\|1683572_1686560_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP042912.1\|WP_075084376.1\|1693006_1693771_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP042912.1\|WP_075084390.1\|1674528_1674852_-\|50S-ribosomal-protein-L23	unknown	unknown	gnl\|CDD\|235586
NZ_CP042912.1\|WP_075084426.1\|1676457_1676781_-\|30S-ribosomal-protein-S10	unknown	unknown	gnl\|CDD\|179076
NZ_CP042912.1\|WP_075084383.1\|1682690_1683449_+\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|366716
NZ_CP042912.1\|WP_075084388.1\|1675582_1676296_-\|50S-ribosomal-protein-L3	unknown	unknown	gnl\|CDD\|234564
NZ_CP042912.1\|WP_075084385.1\|1681758_1682286_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075084393.1\|1672172_1672880_-\|30S-ribosomal-protein-S3	unknown	unknown	gnl\|CDD\|234722
NZ_CP042912.1\|WP_075084379.1\|1690018_1691068_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238331

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_087149646.1\|1682297_1682675_+\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.9667e-36
NZ_CP042912.1\|WP_075084380.1\|1686919_1689949_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	4.91394e-149
NZ_CP042912.1\|WP_075084389.1\|1674854_1675523_-\|50S-ribosomal-protein-L4	gnl\|CDD\|235404	PRK05319, rplD, 50S ribosomal protein L4; Provisional.	1.32756e-89
NZ_CP042912.1\|WP_075084391.1\|1673604_1674462_-\|50S-ribosomal-protein-L2	gnl\|CDD\|236488	PRK09374, rplB, 50S ribosomal protein L2; Validated.	0
NZ_CP042912.1\|WP_075084378.1\|1691407_1692556_+\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	8.67628e-145
NZ_CP042912.1\|WP_075084427.1\|1672934_1673282_-\|50S-ribosomal-protein-L22	gnl\|CDD\|234793	PRK00565, rplV, 50S ribosomal protein L22; Reviewed.	2.05781e-37
NZ_CP042912.1\|WP_162273946.1\|1693803_1694436_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	1.38562e-08
NZ_CP042912.1\|WP_162273947.1\|1677429_1678743_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.29991e-78
NZ_CP042912.1\|WP_075084392.1\|1673329_1673599_-\|30S-ribosomal-protein-S19	gnl\|CDD\|178985	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed.	5.45504e-54
NZ_CP042912.1\|WP_075084377.1\|1692667_1693003_+\|hydroxyisourate-hydrolase	gnl\|CDD\|100114	cd05822, TLP_HIUase, HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). HIUase has high sequence similarity with transthyretins and is a member of the transthyretin-like protein (TLP) family. HIUase is distinguished from transthyretins by a conserved signature motif at its C-terminus that forms part of the active site. In HIUase, this motif is YRGS, while transthyretins have a conserved TAVV sequence in the same location. Most HIUases are cytosolic but in plants and slime molds, they are peroxisomal based on the presence of N-terminal periplasmic localization sequences. HIUase forms a homotetramer with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located between a pair of subunits.	2.26211e-53
NZ_CP042912.1\|WP_075084382.1\|1683572_1686560_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.18797e-66
NZ_CP042912.1\|WP_075084376.1\|1693006_1693771_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.13152e-69
NZ_CP042912.1\|WP_075084390.1\|1674528_1674852_-\|50S-ribosomal-protein-L23	gnl\|CDD\|235586	PRK05738, rplW, 50S ribosomal protein L23; Reviewed.	6.37302e-35
NZ_CP042912.1\|WP_075084426.1\|1676457_1676781_-\|30S-ribosomal-protein-S10	gnl\|CDD\|179076	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed.	5.33326e-55
NZ_CP042912.1\|WP_075084383.1\|1682690_1683449_+\|chemotaxis-protein-CheW	gnl\|CDD\|366716	pfam01584, CheW, CheW-like domain. CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA binds to CheW, suggesting that these domains can interact with each other.	1.53425e-24
NZ_CP042912.1\|WP_075084388.1\|1675582_1676296_-\|50S-ribosomal-protein-L3	gnl\|CDD\|234564	PRK00001, rplC, 50S ribosomal protein L3; Validated.	2.16916e-107
NZ_CP042912.1\|WP_075084393.1\|1672172_1672880_-\|30S-ribosomal-protein-S3	gnl\|CDD\|234722	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed.	7.79349e-107
NZ_CP042912.1\|WP_075084379.1\|1690018_1691068_+\|hypothetical-protein	gnl\|CDD\|238331	cd00588, CheW_like, CheW-like domain. CheW proteins are part of the chemotaxis signalling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in the chemotaxis associated histidine kinase CheA binds to CheW, suggesting that these domains can interact with each other.	8.15585e-06

>NZ_CP042912.1|WP_168211075.1|1678858_1679014_+|hypothetical-protein
MPIPDNIRKNWIELQKKFDHPVNAIGVKIAESDAKTLSVWKEEGIDQYQQK
>NZ_CP042912.1|WP_162273947.1|1677429_1678743_+|insulinase-family-protein
MLTTPQTGWTRLDNGVRVVTERVQNSVSTGISVLVDAGPQDEADGKLGLAHLCEHAAFLGTPLRTSRELARMIDAAGGCFGAFTAPDYTCYYSHVLDEYASYAMDLLGDILVASKYPEEALEREKDVICQEIIGGQDSPDERLLELTKKNLWPEDTLSNSLIGSEEDVRALDRSDVVQFVSRQYTPDRIIVAAAGSVEHDSIVEQVQDAFWPLRGQSSPRPMDPPVVRGGVAIEAMPTSHCNFAIAVPTPGFADERRYVLHVMNNLIGGGMSSRLFQSLREEHGLVYSVQSSILSYRRGGALVVTGATSSDQLIKAVNLVMMQLISLAMGEPAVDEEELWKSKMQVRSQSRLATDMVSNRVSRIATQEFHLQTRIEDEKILEAIDSVTIEAVQEMAIEILLGGMGRLSLVAVGPLERDGPIYSELNNIYGSFSALEA
>NZ_CP042912.1|WP_075084426.1|1676457_1676781_-|30S-ribosomal-protein-S10
MAGNHEVIRIRMEAYDHSILDQSAQDIVDTAKRTHSEVHGPIPLPTRIEKYTVLSGPFVNKKARHQFEIRTHKRLIDIVQATAKTIEALNKLSLPAGVSIKIKASTK
>NZ_CP042912.1|WP_075084388.1|1675582_1676296_-|50S-ribosomal-protein-L3
MAKGILGRKVGMTQVFDPETGVVTPVTVIEAGPCKVLQVRTPEKDGYSAVQLGFGEKARPKKDLRSRQSQASRAERGHVADIKSKRSQKLAAAGQLREKANCEPAKFVREIRGNSESEVGNEVKVDVLAEVPRVDVMGISKGRGTAGVMKRHNFSGQRATHGVKKCHRHAGGTGMSAYPSRTFKGKRMAGRYGNAQVTVRNLNLVQVDAENNLLLVEGAVPGPNGGYLVIRETNMKK
>NZ_CP042912.1|WP_075084389.1|1674854_1675523_-|50S-ribosomal-protein-L4
MASLPVYDSAGKEVGKYEISPEDISATINKQLLHDVVVMYQASARQGTHKTKSRSEVAGSGKKMYRQKGTGNARAGSRRSNIRRGGGHAFARRPRDYSYRLPRKAVRAATRMAIAGKIRDEQVAVIDKLAMETPKTSEIAGMLKGMGLCGSTTLIATAEVSSAVHKSARNIQGVSVMPVCDLNALEVLKPKKVLFTREALDQLKNGVPPKAQPEAATSGEEA
>NZ_CP042912.1|WP_075084390.1|1674528_1674852_-|50S-ribosomal-protein-L23
MGLKRKPPAPRKGPKLEPHQVIIKPMVTEKGVYQSNELNQYTFKVNALATKTEIKAAVEELFKVKVEKVATQTRKGKPRRYRFTWGRTKAWKKAIVKLNSEHRIDFF
>NZ_CP042912.1|WP_075084391.1|1673604_1674462_-|50S-ribosomal-protein-L2
MGIRKYKPTSPGRRDASVCDFKELTKGAKPEKSLLRPLKKHAGRNNQGKITVRHRGGGHKRMYRVIDFKRSKDGVSSFVDSIQYDPNRSARIALLKYADGEKRYIIWPEGLKKGMTVESGPDAPPTVGNCLPLKNIPLATVIHNVEMRPGQGAILCRSAGSSATLMAREANWAQISLPSGEIRRIPAACRATIGRVGNSEHSSVRLGKAGRSRWLGRRPTVRGTAMNPIDHPHGGGEGRTKGGRHPVSPSGKPAKGGRTRQLAKASNAAIVRRRKSKRYGQLKVK
>NZ_CP042912.1|WP_075084392.1|1673329_1673599_-|30S-ribosomal-protein-S19
MSRSQKKGPYVDEKLYAKVEKAEAAGSKEPIKTWARSCTVVPEFIGYTFMVHNGRQHMKVYVTEDMVGHKLGEFAATRTFRGHGGGKKK
>NZ_CP042912.1|WP_075084427.1|1672934_1673282_-|50S-ribosomal-protein-L22
MAFESKLRYAKISARKVRPLADLVRGQFVDDALDILRYQPHRGARMLEKTIKAALANAQDPEQNPGRIVDEHRLIVSEACIDGGPMFKRVRPCGRGMARMILKRQSHIRIKLEEV
>NZ_CP042912.1|WP_075084393.1|1672172_1672880_-|30S-ribosomal-protein-S3
MGQKVNPVAFRCGVMETWKSRWYASKGEFAQFLLEDKKIRDFIKKHPTQNYKAAGIDKIEIERTRDEVKVTLFVARPGLIIGKKGQEVERLQNEIQNLVGRRINLKIEEVSRPDMQAQLVAEKIAEQLTRRSSFRRTMKRAAEESMDAGAKGIKIQLAGRLGGAEMARREKQISGSIPLSTLRAKINYGFTEALTAQGHIGVQVWINQGNYGDEDNGADAKTGQASKSPKRSYKR
>NZ_CP042912.1|WP_075084385.1|1681758_1682286_+|hypothetical-protein
MSQTKSYPPSGPQGSEVATGIKVSSAELELGCINLISQLEMQIESARSGSGHVEKASVNTDKLLSVLLDFCDQYFDGDTAGVALESIEKASFASLAHREVLSSLGWGFAVRNLFGKSVCSDDRVRQTYDSLGNALLTACVSVLRQAVLAVGCDSAVGKTIEQSTAVFVEEFKANW
>NZ_CP042912.1|WP_087149646.1|1682297_1682675_+|response-regulator
MQKVLVVEDSPTTRRQITDILEGAGYEVISAEDGEAALELVREHHPELVVLDIVLPKKNGYQVCRNIKADPELAIKVMMLTAKDQEKDRIWGQRQGADVYLSKPVDADELVKAVNDMVSTPSRIN
>NZ_CP042912.1|WP_075084383.1|1682690_1683449_+|chemotaxis-protein-CheW
MTDPTNILPSDDPLKADVQKALLAAFGEEAIGWLDEADDLELEVQADESPQQETESSSVEITKPDQGLSNLLDQISAAIEGSSTDALASGIDDEADEDGDAVVELGPRYVVFEIGDQQYGIPLDGVLEIDRCGKVTSLPRTPAWLRGVTNLRGQILSVTDFRDLLGLSDQRRAVGEKIIVVHSESHDSCTALVVDRVLGIRNLRGEQGPLEGLSDRLAVFADSLAVTDQATTVLIDPDLLLGSNELSAFAVE
>NZ_CP042912.1|WP_075084382.1|1683572_1686560_+|HAMP-domain-containing-protein
MATKSSFTENGLFKFFGKTIQRKLVALLIAVGLLPMLAVAISMYQSTSDGLFNKSFAQLEAIKTIKANQVSDYFGFIDKQIRTFSEDIAVVDAMKAFPGAEKTARTEVGATDDDLAKMEQHLRGYYTDKFGAEYGSRNDGAAPPTDEQFQPLDKDSIYLQYQYISANPNPLGSKEVLDAAEDGTAYGKLHAKFHPMVRSYLQKFGYYDIFLCDLESGDIVYSVFKELDFTTSLKDGPYAETNFGRAFQLAAEAKSAEEVFLVDYEEYVPSYNDAASFISSPIYDGDKKIGVAIFQMPIDKIAAIMGERTGMGESGETYAVGTDMLLRNDSRFTPDTMMNPEYVINTKAVQEAFKGNSGLEVIDDYRGVPVLSAWSPVTIYDGIPGRAEPITWALMSEIDDAEVREPLGFMTVAQTGLVWIIGAILGGGLLIWFVARGITQQAASIKEMLGNVGIGLLDARAEKITNDELGDVAEALNAMSETTLSLIESDEKRQGVQQSIEELIGEMEQIAGGNLAVNADVKEDITGTIAGTVNHMTEQLRMIVQQVQNATYMVTSSADEIADQSTQLSQDNEQQAQDIETTSAEVLQITGQFQNVARKTEESVQVAQQARESANRGYKAVTDTVDGMDRIREQVQTTSKRIKRLGESSQEVGEIVQLISDIADRTSILALNASIQASMAGDAGQGFAVVAEEVERLAERSTDATKQISTLIKAIQTGTSEAISDMEEATREVVEGSQLATQAGQTLAEINEVSQQLETSIKQVSDSALEQAAAATRIASTMNNISTTTKQSAEKSRSATEQVTALATLANQLGDSVSRFQLEQGEDQAYTVMNQVNEMSEIASSATRSTANTTLTRLVYTSVRTASCNDAAVEDIVASAQRNNPPLDLTGVLFHTKNRFLQVLEGPHDNVMETYEKIVEDTRHRSALVRFCEPIQQRHFGNWGMGSSFVEQELMHGSEIDRAVYDAVVHGDTDSFGDSGMDVLKDFLNNATQRV
>NZ_CP042912.1|WP_075084380.1|1686919_1689949_+|hybrid-sensor-histidine-kinase/response-regulator
MPSNDNVDINEVLRQLRAGGNMPEELAEIFSEEAEEHMRNIYDGLDRLRVDPNDEPALSDVRRSSHTLKGAAGAVGFEAITRLAHRMEDLLDWLGDHKQGPNENQLQLLLTTADQIDDLTTSEIDFEEMAGTLIEIYGQYDKVMASLGTANVDPVGDDAMSANAHSDEEDAAEALGESQAEVPAVDVDEIRTELESGSTISDELAEIFAEEADEHLAAIGTGLTQLISDPADKSAAADVRRSAHTLKGAAGAVGMMSMHRLAWRVEMLLDALAESAATLTAEQVELLNESGERLLELRNGSYKTDDLTAALATIYGRYEQELALLVPAKQVQPETSNEVVAADAAGDLPKNTAGKGEAVEAKDAAQDSNVEPGKSQKQKAAANQPTQYLRVPLDRLDSLVSLVGEMVVNRSTFSQRLNDFADRIEEMNSSLDRLRTVASDVETRYSVEALQAGKLRERGLGVNRIKATLAGNEATDELDSLEFDRYTDFHLLARSLSEATNDIAVISSELRNLHGDFDSLINRQQRFNRDAQSNLMHVRMVPVGNIANRLDRTIRSVSNKLGKKIDLAISGENTELDKTVLEEITDPLLHLIRNAMDHGIETPAQRLSAGKPERSQLRIEALNQGTQVTIRVIDDGRGLDAEKIRLKAVERKLIREDQKLTKEETHALIFTPGFSTADALTDVSGRGVGMDVVREAVQRLKGTIQVESVVGVGSTFTIHLPTTLAVSNALLVESSGHTFAIPMQSVQQIKRLDPTAVTKVGAHPMINLGDRMLLLKDLANHMELRSDQEKFEETKAMLLIRTGDDEVAVTIDSIEGGQDIVVKSLGDHLRHVPGYLGATVSGDGTVIPILDPADLCGQESSAKRANRMRRRSDNAPKIHRKTAMVVDDSLSVRRVTTNLLRSFGWEVIDAKDGVDALEKLAAADTPPDVFLCDMEMPRMDGLELVSRIRSQAEFRTTPVVMVTSRAGEKHRKLAREAGADEHVVKPFNDENLIGLIDRMVTEHRELVGV
>NZ_CP042912.1|WP_075084379.1|1690018_1691068_+|hypothetical-protein
MLTQTPTLTEAFHPEQLSAGRSNQFVRVRIGEIELVMGTKYLSGVYQASRQHRLTENNTVLTPKGEFPVASLNDVLQQKLNLPITSFEGRALIAVGVDGQVGMLRADSVSRPASIRPAHVHPMPKVAHDESEGSRLIRSVVNVEPSAANPNDCVRLEFDPRVALGMTVPAEPADQPNPLPKEAASAIAAAVAATSRRGSQDNRKSGQLLAFIPDDVAKSEVEQVFCLPLTAVAEVVTTQRHLNSTVSSDVFDGFVLWRKVPVPIVQLGKIFGFNLERETESSRRLVIARATGNRFLGFYAQPQMQTMKVPESVPGSNTLFEGRPHLGCFRTELGELVVPDLNRILDNGF
>NZ_CP042912.1|WP_075084378.1|1691407_1692556_+|alpha-hydroxy-acid-oxidizing-protein
MAEHFNSEFPSVEHLIRQAKKRMPGFAFDYLTAGCFGEVNLDRNQKDIRDVQLKPWYLRDYEGSNLKTELFGKTYDAPFGMAPVGLQGLMWPKACEYLAQAATDHNIPFCLSTVSTASIETVSAITGGDFWFQLYHPAEDKLRDKLLERAWESGCKTLVILADTPTFAYRPKEIRNGLSIPPRMTMRNILQMCTRPTWSLGQLMAGAPEFKTMKPYIPAGLNMKHLGLFMNKTFSGRLTESKIAPIRDQWKGNLVIKGVVNPEDAELAIKHGLDGMIVSNHGGRQLDRGESTIRPLARLAPEFGDRIKIMMDSGIRSGADVASTIASGAAFTFLGRTPMFGVCALGKYGGHHTFEMLKKQIQQVMEQVGCESVDRLPEHLVG
>NZ_CP042912.1|WP_075084377.1|1692667_1693003_+|hydroxyisourate-hydrolase
MSGITSHVLDTSRGVPAANIEVQLELKKDNEWKRIGEGTTNKDGRLPEPLATELVAGHYRIVFLVADYFSDMKKPSFFPRVRIEFLVDDPMEHYHVPLLLSPFGYSTYRGS
>NZ_CP042912.1|WP_075084376.1|1693006_1693771_+|SDR-family-oxidoreductase
MHATYHDLKDSSVFITGGGSGIGAAITESFLAQGAKVAFVQRSDASEFVAEMKAKHGAAPLYIECDVTDVDALKAAIAQAGDAHGTITTLVNNAAWDNRHPVQGFTPDEWDSMMRVNLRPHFFGAQAVAPGMKEAGGGSIINFSSIAFRIAVQGFPAYATAKAGIVGLTNSMARELGPDFIRVNSVLPGWVLTKRQMDLWATEEALKEFLAMQCLPEHLHEKDIVGTVLFLASNSSRMMTGQSLVVDGGVTFPG
>NZ_CP042912.1|WP_162273946.1|1693803_1694436_-|sigma-70-family-RNA-polymerase-sigma-factor
MAQTELFELYSPAVKRYLLASLGNRESADEVFQEFALRIVRGDFRNADFEKGRFRNMLKTSLYRLMVDFHRRKQKQRKLGTADQIDFIAAEEDADSGCDAFTLAWRQTMLDQAWRRLEQLQIESSKPYYTILRARVDHPEMTTKQLHEHLHESQPIAIPAEGSFRVYLHRARRRFAKLLTEQVAISIEEPTPDNIEAELIDLGLHVFCRP

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Crispr_ID: NZ_CP042912_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_2

1941467-1941656

Orphan

Consensus_repeat	Method
GCAGCTAAAACTCACGACGAAGCGGCGCAAACAAATGATTCCT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP042912_2

>merge|NZ_CP042912|2|1941467-1941656|PILER-CR
GCAGCTAAACCTCACGACGAAGCGGCGCAAACAATTGTTTTAGTGGCTTAAACAAATGGTTTCGCGGTTAAAACTCACGACGAAGCGGCGCAAACAAATGATTCCGTGGCGCAAACAATTGTTTTCGTGGCTAAAACTCTCGACCAGGCCGCTAAAACTCACGACGAAGCGGCGCAAACAAATGATTCCT

>NZ_CP042912|2|1|1941467-1941656|PILER-CR
GCAGCTAAACCTCACGACGAAGCGGCGCAAACAATTGTTTTAGTGGCTTAA	ACAAATGGTTTCGCGGTTAAAACTCACGACGAA
GCGGCGCAAACAAATGATTCCGTGGCGCAAACAATTGTTTTCGTGGCTAAA	ACTCTCGACCAGGCCGCTAAAACTCACGACGAAGCGGCGC
AAACAAATGATTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075082173.1\|1940726_1941134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_084416931.1\|1935893_1937378_+\|haloacid-dehalogenase-type-II	unknown	unknown	gnl\|CDD\|319787
NZ_CP042912.1\|WP_075085050.1\|1945144_1946182_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225041
NZ_CP042912.1\|WP_075083249.1\|1939472_1939862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_084417193.1\|1948953_1949964_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP042912.1\|WP_075083267.1\|1938565_1939078_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226339
NZ_CP042912.1\|WP_075083265.1\|1935062_1935812_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187612
NZ_CP042912.1\|WP_075083246.1\|1934405_1934972_+\|carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|130981
NZ_CP042912.1\|WP_068267841.1\|1939917_1940697_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP042912.1\|WP_075085044.1\|1954311_1955760_+\|DUF1593-domain-containing-protein	unknown	unknown	gnl\|CDD\|377887
NZ_CP042912.1\|WP_148618693.1\|1937939_1938440_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085046.1\|1952296_1953175_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377098
NZ_CP042912.1\|WP_075083245.1\|1931725_1932499_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP042912.1\|WP_148618695.1\|1953453_1954161_+\|Mpv17/PMP22-family-protein	unknown	unknown	gnl\|CDD\|367825
NZ_CP042912.1\|WP_075085048.1\|1946972_1948787_-\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|273909
NZ_CP042912.1\|WP_087149669.1\|1955818_1956415_-\|DUF4254-domain-containing-protein	unknown	unknown	gnl\|CDD\|379447
NZ_CP042912.1\|WP_068267800.1\|1942759_1943989_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP042912.1\|WP_075085049.1\|1946230_1946902_+\|AhpC/TSA-family-protein	unknown	unknown	gnl\|CDD\|239268
NZ_CP042912.1\|WP_075085047.1\|1950318_1952034_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235131
NZ_CP042912.1\|WP_087149607.1\|1932646_1934191_+\|mercuric-reductase	unknown	unknown	gnl\|CDD\|235787

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_084416931.1\|1935893_1937378_+\|haloacid-dehalogenase-type-II	gnl\|CDD\|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.97697e-73
NZ_CP042912.1\|WP_075085048.1\|1946972_1948787_-\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|273909	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	7.85668e-98
NZ_CP042912.1\|WP_075085050.1\|1945144_1946182_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|225041	COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only].	0
NZ_CP042912.1\|WP_084417193.1\|1948953_1949964_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP042912.1\|WP_075083267.1\|1938565_1939078_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226339	COG3818, COG3818, Predicted acetyltransferase, GNAT superfamily [General function prediction only].	8.2105e-37
NZ_CP042912.1\|WP_075083265.1\|1935062_1935812_+\|SDR-family-oxidoreductase	gnl\|CDD\|187612	cd05354, SDR_c7, classical (c) SDR, subgroup 7. These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	2.41796e-111
NZ_CP042912.1\|WP_075083246.1\|1934405_1934972_+\|carboxymuconolactone-decarboxylase	gnl\|CDD\|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	2.08431e-15
NZ_CP042912.1\|WP_068267841.1\|1939917_1940697_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	2.49194e-26
NZ_CP042912.1\|WP_075085044.1\|1954311_1955760_+\|DUF1593-domain-containing-protein	gnl\|CDD\|377887	pfam07632, DUF1593, Protein of unknown function (DUF1593). A family of proteins in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus. These proteins mat be related to pfam01156.	2.44619e-159
NZ_CP042912.1\|WP_075085046.1\|1952296_1953175_-\|hypothetical-protein	gnl\|CDD\|377098	pfam03690, UPF0160, Uncharacterized protein family (UPF0160). This family of proteins contains a large number of metal binding residues. The patterns are suggestive of a phosphoesterase function. The conserved DHH motif may mean this family is related to pfam01368.	1.79647e-11
NZ_CP042912.1\|WP_075083245.1\|1931725_1932499_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.92201e-29
NZ_CP042912.1\|WP_148618695.1\|1953453_1954161_+\|Mpv17/PMP22-family-protein	gnl\|CDD\|367825	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family. The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesized on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance.	0.00135573
NZ_CP042912.1\|WP_087149669.1\|1955818_1956415_-\|DUF4254-domain-containing-protein	gnl\|CDD\|379447	pfam14063, DUF4254, Protein of unknown function (DUF4254). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 195 and 207 amino acids in length.	3.11874e-65
NZ_CP042912.1\|WP_068267800.1\|1942759_1943989_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	2.52331e-92
NZ_CP042912.1\|WP_075085049.1\|1946230_1946902_+\|AhpC/TSA-family-protein	gnl\|CDD\|239268	cd02970, PRX_like2, Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.	1.28702e-37
NZ_CP042912.1\|WP_075085047.1\|1950318_1952034_-\|hypothetical-protein	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	9.41433e-90
NZ_CP042912.1\|WP_087149607.1\|1932646_1934191_+\|mercuric-reductase	gnl\|CDD\|235787	PRK06370, PRK06370, FAD-containing oxidoreductase.	0

>NZ_CP042912.1|WP_075082173.1|1940726_1941134_+|hypothetical-protein
MKIPLGQSGADTGREIAENLEKIVDGQDRLLVEVLLPHQIKRLKEISFQALEKEYGIMTVLQSSRIRKDFDIGTDQLTSFQQEAKKIENKLAEDIEKLKTKARQDLLSHLSSDQRAKYDDLHGETFQSTQSDWKR
>NZ_CP042912.1|WP_068267841.1|1939917_1940697_+|IS5-family-transposase
MSIEYPSSLSDDQWRLLRRLIPPAKLRGRKRIDRRQIVDAILYWCRTGCQWRLLPDCFPNWNTVYGVYRAWRIDGTWQRIHDRLREKVRRKEGRKPTPTAAIIDSQSIRSAEGGELRGYDAAKRITGRKRHILVDTLGLVMVVVVHSADLQDYEGAHLVLENIRQKFRRLRVIFADSIYGRADLPEFLKQWYRVILQTVKRPVEAEGFVVLPKRWIVERTFAWLGKFRRLSKDYERLTQNSETVIRIAMIQFMLNRLEK
>NZ_CP042912.1|WP_075083249.1|1939472_1939862_+|hypothetical-protein
MTSFNTIASVALFFILMFLQLANGQEGLPEGTIALPTVDSQGNVVTVSGITFDKEGARPSYELGLGSEVFGVRVSKGPSEVAPAPLINLMNHLSIKKELELTDEQQEAVSKIRLEGQKALRRCFETALS
>NZ_CP042912.1|WP_075083267.1|1938565_1939078_-|GNAT-family-N-acetyltransferase
MNNLTIRDMTPEDASDVIALNEAVVHTTSPMDIDRFKVLYALSDLKLIAQVNGDVVAFVMGIASDSSYDNGNYDWFSERLKRFLYVDRVVVSDRCRGMGVGRLLYSQIHDWAVRSRLLTVCAEMNLNPPNHQSLRFHRNAGFVQIGTRMLENGKLVSMQIRSISEDSETT
>NZ_CP042912.1|WP_148618693.1|1937939_1938440_-|hypothetical-protein
MLTTLVSVFLAGYMLKPVSKPTFAPIEIYETSLAEFAAGDLVPCEKEEAEFVLSISCLKTSAERHMWREYFCIYDGSNTDPSSNSTMHGAHSITCGDLGSVLLGVELVRLGPSALEIDFSCHIIENGTELDFSSSIHPQLNAKGIVTLEEDSSIAWDFNAVDANDR
>NZ_CP042912.1|WP_084416931.1|1935893_1937378_+|haloacid-dehalogenase-type-II
MRNLRLTLAWAAALLVAVSPLVNAQTTSEKNLKSDKKAAMSKETLPRPKVIIFDVNETLLDLAPLKSSVGKALNGREDLLPLWFSTMVHYSLVETLSDDYHSFGEIGTAALMMVAETQGIELSYDDAKTAIVTPLRSLPPHADVIEALKALKADGYKIVSLTNSSSVGVETQFKNAGLTEFFEKRYSVDSVKKFKPHPETYKMALADLGVKPEEALMVAAHAWDIAGADNVGLQTAFVARPGKTLYPNADKPDYVVNDLSELVKHLAATKTAQADTESDKTLAEQLAAQAAKSAKRFPESVRKVYAEGIETVRATQIEESAKQVGDAAIDAELTNWNGETVKLSELWSEGPVVLMWYRGGWCPYCNIQLRAMQQNLDKIENAGARLVVLTPELPEKAKETAATNNLDIVALHDNGSAVARKYGILFKLPAAIVPSYRDKLKLPEYNGNDAMELPLSATYVIDKSGTITYAFLDADYKKRAEPADVIEAVKAAAK
>NZ_CP042912.1|WP_075083265.1|1935062_1935812_+|SDR-family-oxidoreductase
MTFEAKDKTVLVTGANRGIGKVILEEALQRGATKVYAAVRDLDSAKPLVEAHGDRVVPVRLDLNDPASITAAAELANDVDVVVNNAGVLKQSEATSDDAIESLKFEMDVNVYGLIRVAQAFAPALKSNGGGALVQLNSVASVKTFANMATYCASKAASYSITQGLRDSLREQGTLVVSVHPGPIQTDMGHDAGFQDIAESPTLVASAIFDAIANGQFHVWPDSMAQQVGGAYQSFAENVVEANMEESVA
>NZ_CP042912.1|WP_075083246.1|1934405_1934972_+|carboxymuconolactone-decarboxylase
MTDFQLHNVESAPEASKASLEASQKAYGVVPNLHAAMAESPALLEAYKTIGGIFGKTELSMTEQQIVAMTNNRLNGCTYCMAAHTTIMQGAKVPEDVITSLREGTQIADPKLEALRQFAEKVNLKRGHLDDGDIEALIDAGYTKQTVLEVILGTAFKVLSNYTNHVVQTPLDDMFAKNEWAGESQPAS
>NZ_CP042912.1|WP_087149607.1|1932646_1934191_+|mercuric-reductase
MIQLQPHDEHNRELESNVHPPEWQNPTPADNYHLVVIGAGTAGLVTAAGAAGLGARVALIERELMGGDCLNVGCVPSKGLIGAARVAATVRDAAPFGVNVPEGSAVDFGKAMERMREKRAGISHVDSAQRFKDLGVDVFLGQGKFTDDNTVTVTRKDGSVSQLKFKKGVIATGARAAAPPIKGLDSVDYLTNENLFSLTELPKRFGIVGSGPIGAEMAQSFARFGSEVFLFERGDHILTREDDEAAAVVQNQFEKDGVNLMLNSKDMELAPAADGKISVKVTQNGTQSETVVDQLLVAVGRAPNTDGLNLEGVNVDFDKKGIQVNDNLQTTNPRIYAAGDICSKYQFTHAADFQARIVIQNALFAVGPFGKKKSSDLIIPWATYTSPEIAHVGMYPKDAKEAGIEIDTYTQQLEHVDRAILEGNDEGFVKVHTKKGTDKIVGATIVAENAGDLISEITVAMQNKIGLAGIGSTIHPYPTQADAIRKLGDQFNKTKLTPFSEKMLGLLRRLNVGK
>NZ_CP042912.1|WP_075083245.1|1931725_1932499_+|TVP38/TMEM64-family-protein
MPDENESKSDSGRGIWTKLIVLGIVVSLAAVVYFFFGDMLSLDSLAEQESQLRDFQTQHPVLVFGIAFLIYVAVTGLSLPGAAALTLLYGWYFGLVPGFLLVSFASTTGATIAFLFSRYLFRDAIQNRFGERLEKFNESLEREGPFFLFTLRLIPAVPFFVINAVMGLTPIKTRTFWWVSQLGMLAGTLVYVYAGSRVPSLSKLAEEGINAVFSPTQMVQIVIALALLGAFPLIARWVMKAFFQKSAATDSANSAVT
>NZ_CP042912.1|WP_068267800.1|1942759_1943989_+|ISL3-family-transposase
MQDTELYQQILGIETPWEVSNVDLNMELGEIVVSVRHAQGTKFCCPQCDQKLSCYDHSPSRRWRHLDSCQFKTMLEASIPRVDCPEHGVKLVQVPWSSPNSRFTLMFEAFAIRLLKATQTIEGARTILRTGWEATWTILERAVERGQARKQSSPLPHIGIDEKSFKKGQNYITLIYDLDNSTVEAISEGHNKEAANECFSQLLPGQIETVEAIAMDMSSAFVNAAKSNIPLAETKIVHDRFHVMKLVNEAVDKVRKQENKRLRSEGDDTLTGTRYLFLKNYDNLKESSQQRLDALFSFKLETGKAWTYKEMLRDLWHHDTAKEAKEFFRWWYRKVIHTRLEPMKKVARTIKTRIDNVVSYCTFSGISNGVAEGINSKIQSIKRRVGGYRNRQNYKTAIFFYCGGLDLDP
>NZ_CP042912.1|WP_075085050.1|1945144_1946182_+|NADP-dependent-oxidoreductase
MTTQTTDRNRRIVLASRPHGQPKPENFRLEQTDVPQPGDGEVLLRTMYLSLDPYMRGRMSDGPSYADPVAIDDVMVGGTVCRVEKSNNEKFSQGDMVLGYSGWQDFAISDGGGLVKLDANMQRPSLALGVLGMTGFTAYMGLLDIGQPKAGETVVVAGATGAVGSVVGQIAKIKGCRMVGVAGGETKCRLAVDELGFDACIDHRADDFDEQLAAACTDGIDVYFENVGGKVFDGVLPLLNTKARIPLCGLIAHYNDTELPPGPDRLSLLTRKLLTKRIRMQGFIIFDDYGHRYGEFAAEMGQWVKDKKIKAHEDIVEDLENAPDAFIGLLEGQNQGKLVIRVANE
>NZ_CP042912.1|WP_075085049.1|1946230_1946902_+|AhpC/TSA-family-protein
MNADTDPTNTLRAQTEAKFATTRKNNPEFAKRIDDLLASAEVFQSGANATEVGQQAPGFELPNSQGEKVSLASLLSKGPVVVTFYRGSWCPYCSLQLQAMKSRLEEIHSLGAELVAISPQLPDDSVSQTGQEPLPFPVLSDQDALVAAEYGVSWQVPEVILGHMRNDRGLQLEEINGGNGTVLPIPATFVLNREGVVTWRFVDVDYRQRAEPADIVAALKELQ
>NZ_CP042912.1|WP_075085048.1|1946972_1948787_-|AarF/ABC1/UbiB-kinase-family-protein
MEITELPQLVRNAGRFREVVTILAKHGLADWLTLASPRWLDWLRGKTSDDEDDCSTEQRIRIALTELGTTFIKLGQVLSTRPDLVGQTLATELAELRANTPADDPDSVRAMIESELGGAIEELFAKFEPEAMASASIGQVHKAILHGGEHVVVKVQHPGIEKRIVNDLEIISKLAELAEQHSVYLRQYRPVKTAQEFQRTLMRELDFGREQRNMTRFRENFSDNSQVRFPAAYPELCSRRVLTMDLFEGISVSEKQKLETCGLDLKQVAIDGANLFLDMIFRDGFYHADPHPGNLMVLSASDVAGSSDQRSAGLPSAAGIGVEVDAETPRRRLNGAVGAALVTEKITGPRNESNSSAVIGVLDSGMVGRIDDALQQELELALIAAVHQDGEVITEIIARVGDLPSDFDESELQSAVQEFLDEYSHQSLDDFDLSGCLNEMILIIRSHQIYLPAKIAMLLKVLIMLEGTAQQLSPKFNLAELIQPYGTTAMWRRYSPKRFFSRMKSTVKDWDRLMAILPRDVADILHNMKRGKFDVHLEHRRLEPIVNRLVKGILTAALFMGSASLSSYQVPPTINGFSIPGFLGCGVALYMGWSITRAINRSKK
>NZ_CP042912.1|WP_084417193.1|1948953_1949964_-|alcohol-dehydrogenase-AdhP
MKAAVAHAFGQPLKIEQVAVPQPAAGEVLIRVEACGVCHTDLHAVNGDWPVKPELPFIPGHEGVGIVEAVGSETSLVKVGDRVGVPWLYKACGSCEYCITGWETLCPSQQNAGYSVNGSYADFVVAPEAYVAKIPDGLDPVHAGPILCAGVTTYKGIKETEAKPGEWIVISGIGGLGHLAVQYAKAMGLHVAAVDVADEKLELARSLGAEVTVNANSENPIDQVQQQTGGAHGALVTAVSVPAFHQALGMLRRGGTCALVGLPPGEFPTPIFDVVLKRITVRGSIVGTRKDMQEALQFAAEGKVKTTVEVQPLSAINEIFTRLENGEINGRVVIQP
>NZ_CP042912.1|WP_075085047.1|1950318_1952034_-|hypothetical-protein
MEDVFALLPAILLLAICIVSILLMRRLGLSPIVGYLLGGVLIGHHAFGWIHENGTTHLLAELGVVFLLFDIGMHFSVRHIWETRRDIFGLGSLQMGLTLLAFGGGLMLCGFPFEIALVLGGALSLSSTAVVIPTLSERGQSKCPVGRTSTAVLIFQDVFAIFLLILAGSLTGGGGTEAVESADVAQTSLLTSVGLAVVKGAIAFAIAFALGRYAIRPLFSVVARTRNDEIFTALALLIVLAMAAASGWAGLSLTLGAFLGGMMLAETPYRHLIRTEVKPFRGLLLAFFFISIGMSLDWHVLLSGWWQILSLVAAMILIKAIAISASAKIVGWSLPGSMQLGFVLAQGSEFVFVIVSIPAVRAAVGEQYVGVLFCATAISLALTPTVSELGNRLALHVRTRRSIELPKSEVTPIETTAPVVIFRMNEVGRTVADALTAHQIEFTAIDNDYDRFNAATVDGYQVTFGDLADLRMAETISMDQRSVLVFGNIRVDVAIDLNHIVLERFPKLMRIASVTDKADVERLENLGMHAIVTNSENPGVGLAEKVLSAMSVEQEKIDAWIERRIRKEVSA
>NZ_CP042912.1|WP_075085046.1|1952296_1953175_-|hypothetical-protein
MTIKLIVTHPGGAHKDDFLACSLLAHLHGAPIQRREPNDEDLANVSTCVVDVGGVHDAELNNFDHHQFPRDAPPLCALSLVLQHMGLYDDALSFCAWLRPTEWLDTRGPNETAKLMGIPRQALSELNSPIDVTLLNRFANEAELSPEHPIYQVMCMVGEDLVNYVRSLRERLDFLAQHCQWWTVETEGANEAPIEALFLEQHAEIANDPSFGLHAFITEQKKEDIVHALIYPDRRGSGYGLTRYEDCPRLNFSQIENQEDVRFAHKRGFVAKVDATDPARLKELLAGAVVDA
>NZ_CP042912.1|WP_148618695.1|1953453_1954161_+|Mpv17/PMP22-family-protein
MKPNSALATAIQTGKQAAWQNRWPGAALWLFGVALIAGYYWFEPIRSGLERIGEVKTRYGILFGIVSTAIFGGLIPSILRVAVDRKVPQAFWGLLIANVIFWAFKGAEIDLFYRFQAWMFGDDSSVKTIASKVSFDALRYGPLMGLLNCVLFYIWQDNGYSFSQTRTALGRNWYVRKVLPALISNWCVWLPSAIMIYSLPLALQLPVQNLILCFWVLVLVFFTTTIEDEAAESIA
>NZ_CP042912.1|WP_075085044.1|1954311_1955760_+|DUF1593-domain-containing-protein
MKNYLSCLICCVCIGTAVAKPTVADESTVPEKARVFVLTDIENEPDDAMSMVRFLVYANHYDIEGLAATTSLHQQRRVAPQRIRRIVEAYGKVRDNLEKHEQGFPTAKSLLGMVTEGLPVYGMNGVGEGKDSEASEALVKAVDKDDPRPIWVTAWGGPNVLAQALWKVRETRTAEELKKFVSKIRVYTISDQDDSGPWLREQFPDLFYVASPGFHPGAAYHHATWSGISGDKFHARCAGADFDLVTNEWLDKNIRRKGPLGKEYPHWEYLMEGDTPSFLNLINNGLNNHDHPNWGGWGGRYEFYTPRMQKWFLQKETRPFWACADDEVKGIDGRWYDTNHATIWRWREAYQNDFASRMDWTVKDFGNANHPPIAKLGHPDRLTAKKGEEVSLSAEGSADPDGDALSYHWFAYVEAGTFLCSSATSGQPIEIEGFDQQKATFKIPTRNVMPPGTGTLHIILAVTDHGSPRLTRYRRVIVDLTN
>NZ_CP042912.1|WP_087149669.1|1955818_1956415_-|DUF4254-domain-containing-protein
MINVQDIVTLQMETVSRWHHEPIDNPYSDLEQAVCTQHQFNYQLWHQEDIARSRDVTDEKIAEVKRAIDGFNQNRNDWIEKVDDYITELVQSRSVKVQPDARLNTETPGSVIDRLSILSLRIYHMEEQLERSDVNQEHLDSVNHKIAICRLQQDELSNSLQELLDDIFAGRKRHRTYRQLKMYNDPSLNPYLYKKQVA

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Crispr_ID: NZ_CP042912_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_3

2101416-2101479

Orphan

Consensus_repeat	Method
AACAAGTCTGGGACAGACTTGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042912_3

>merge|NZ_CP042912|3|2101416-2101479|CRISPRCasFinder
AACAAGTCTGGGACAGACTTGGCTACTTACTACGGTGGTGAACAAGTCTGAGGCAGGCTTGGCT

>NZ_CP042912|3|1|2101416-2101479|CRISPRCasFinder
AACAAGTCTGGGACAGACTTGGCT	ACTTACTACGGTGGTG
AACAAGTCTGAGGCAGGCTTGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075085438.1\|2100027_2101134_-\|methyltransferase	unknown	unknown	gnl\|CDD\|368316
NZ_CP042912.1\|WP_075085450.1\|2111655_2115342_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP042912.1\|WP_075085440.1\|2101530_2102757_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP042912.1\|WP_157665197.1\|2108494_2109979_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367483
NZ_CP042912.1\|WP_075085443.1\|2105242_2106781_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_CP042912.1\|WP_075085442.1\|2104723_2105215_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_CP042912.1\|WP_075085432.1\|2081358_2082330_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|274090
NZ_CP042912.1\|WP_075085451.1\|2115334_2115934_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|254323
NZ_CP042912.1\|WP_075085439.1\|2101189_2101387_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_084417262.1\|2096418_2098443_-\|flotillin	unknown	unknown	gnl\|CDD\|225177
NZ_CP042912.1\|WP_075085435.1\|2090773_2096185_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|378861
NZ_CP042912.1\|WP_075085437.1\|2099625_2099874_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|379097
NZ_CP042912.1\|WP_075085433.1\|2083811_2087408_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341059
NZ_CP042912.1\|WP_075085445.1\|2107054_2108053_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_084417296.1\|2082501_2083716_+\|aminoacetone-oxidase-family-FAD-binding-enzyme	unknown	unknown	gnl\|CDD\|272992
NZ_CP042912.1\|WP_075085448.1\|2109975_2111244_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP042912.1\|WP_148618701.1\|2098489_2099140_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369302
NZ_CP042912.1\|WP_075085449.1\|2111321_2111630_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085434.1\|2087939_2090750_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|223003
NZ_CP042912.1\|WP_075085441.1\|2103050_2104535_+\|decarboxylating-NADP(+)-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075085438.1\|2100027_2101134_-\|methyltransferase	gnl\|CDD\|368316	pfam05175, MTS, Methyltransferase small domain. This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.	6.34626e-26
NZ_CP042912.1\|WP_075085450.1\|2111655_2115342_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.62407e-80
NZ_CP042912.1\|WP_075085440.1\|2101530_2102757_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	1.48733e-123
NZ_CP042912.1\|WP_157665197.1\|2108494_2109979_+\|hypothetical-protein	gnl\|CDD\|367483	pfam03412, Peptidase_C39, Peptidase C39 family. Lantibiotic and non-lantibiotic bacteriocins are synthesized as precursor peptides containing N-terminal extensions (leader peptides) which are cleaved off during maturation. Most non-lantibiotics and also some lantibiotics have leader peptides of the so-called double-glycine type. These leader peptides share consensus sequences and also a common processing site with two conserved glycine residues in positions -1 and -2. The double- glycine-type leader peptides are unrelated to the N-terminal signal sequences which direct proteins across the cytoplasmic membrane via the sec pathway. Their processing sites are also different from typical signal peptidase cleavage sites, suggesting that a different processing enzyme is involved. Peptide bacteriocins are exported across the cytoplasmic membrane by a dedicated ATP-binding cassette (ABC) transporter. The ABC transporter is the maturation protease and its proteolytic domain resides in the N-terminal part of the protein. This peptidase domain is found in a wide range of ABC transporters, however the presumed catalytic cysteine and histidine are not conserved in all members of this family.	2.01382e-19
NZ_CP042912.1\|WP_075085443.1\|2105242_2106781_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP042912.1\|WP_075085442.1\|2104723_2105215_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	3.76926e-08
NZ_CP042912.1\|WP_075085432.1\|2081358_2082330_+\|DnaJ-domain-containing-protein	gnl\|CDD\|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	5.09254e-83
NZ_CP042912.1\|WP_075085451.1\|2115334_2115934_-\|hypothetical-protein	gnl\|CDD\|254323	pfam07638, Sigma70_ECF, ECF sigma factor. These proteins are probably RNA polymerase sigma factors belonging to the extra-cytoplasmic function (ECF) subfamily and show sequence similarity to pfam04542 and pfam04545.	9.45306e-23
NZ_CP042912.1\|WP_075085441.1\|2103050_2104535_+\|decarboxylating-NADP(+)-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP042912.1\|WP_084417262.1\|2096418_2098443_-\|flotillin	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	2.4806e-53
NZ_CP042912.1\|WP_075085435.1\|2090773_2096185_-\|AAA-family-ATPase	gnl\|CDD\|378861	pfam12458, DUF3686, ATPase involved in DNA repair. This domain family is found in bacteria, and is approximately 450 amino acids in length. There are two conserved sequence motifs: DVF and SPNGED.	0
NZ_CP042912.1\|WP_075085437.1\|2099625_2099874_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|379097	pfam13275, S4_2, S4 domain. The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4.	4.91612e-23
NZ_CP042912.1\|WP_075085433.1\|2083811_2087408_+\|hypothetical-protein	gnl\|CDD\|341059	cd09596, M36, Peptidase M36 family, also known as fungalysin family. The M36 peptidase family, also known as fungalysin (elastinolytic metalloproteinase) family, includes endopeptidases from pathogenic fungi. Fungalysin can hydrolyze extracellular matrix proteins such as elastin and keratin, with a preference for cleavage on the amino side of hydrophobic residues with bulky side-chains. This family is similar to the M4 (thermolysin) family due to the presence of the HEXXH motif in the active site residues, as well as its fold prediction. Some of these enzymes also contain a protease-associated (PA) domain insert. The eukaryotic M36 and bacterial M4 families of metalloproteases also share a conserved domain in their propeptides called FTP (fungalysin/thermolysin propeptide). Aspergillus fumigatus causes the pulmonary disease aspergillosis by invading the lungs of immuno-compromised animals; it secretes fungalysin that possibly breaks down proteinaceous structural barriers. A solid lesion known as an aspergilloma can grow in a lung cavity, particularly following recovery from tuberculosis. Fungalysins are also found as multiple copies in the human and animal pathogenic fungi such as Microsporum canis, Trichophyton rubrum and T. mentagrophytes, which cause cutaneous infections.	7.51712e-19
NZ_CP042912.1\|WP_084417296.1\|2082501_2083716_+\|aminoacetone-oxidase-family-FAD-binding-enzyme	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	7.91906e-142
NZ_CP042912.1\|WP_075085448.1\|2109975_2111244_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.72376e-28
NZ_CP042912.1\|WP_148618701.1\|2098489_2099140_-\|hypothetical-protein	gnl\|CDD\|369302	pfam07290, DUF1449, Protein of unknown function (DUF1449). This family consists of several bacterial proteins of around 210 residues in length. The function of this family is unknown.	4.33291e-05
NZ_CP042912.1\|WP_075085434.1\|2087939_2090750_+\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	9.27676e-06

>NZ_CP042912.1|WP_075085439.1|2101189_2101387_+|hypothetical-protein
MDDSTQTNSDSHEEEDSIAEELRRKYLYRKLVINGGIKMPARLAMKMVGPDCAFHLYRNHQPDEE
>NZ_CP042912.1|WP_075085438.1|2100027_2101134_-|methyltransferase
MTDPNRTPDPAFAPPEVKVEIRPNEACLHEVASKLPGNSIVVVSNGRAQAAEMLASARPNANVTAWYLDSYRCSLARTHYSDPPANLDFACDADWGKDSESAQVDLVCLALLKGGEAELNREILQTAYHHLEIGGALVVAINNPKDKWLYEQMQAFNKSVKVRKFKQSNVYYVIKRKELKKRKDYSCQLAFRDEGNLIQIVTRPGVFAHRQFDNGARQILDVVEVFPECDIIEIGCGSGAMSLALAKRDPSCSLYAIDSYSRAIDCTRRGAELNGLSNVVAELNHDGHLGNRAGQFDMAIANPPYYADFRIAKHFIETAVRALRIGGRMVLVTRMPQWYRDNLGQWLDEVEVFESRRYHIATGIARRQ
>NZ_CP042912.1|WP_075085437.1|2099625_2099874_+|RNA-binding-S4-domain-containing-protein
MSEENQPAESPAEDVPLNIRLDQFLQLCGVPTGGQAKILIQDGQVTVNGEVETRRRKKLVIGDEVGLDGEVYDVALSADEEE
>NZ_CP042912.1|WP_148618701.1|2098489_2099140_-|hypothetical-protein
MIDFINETFQLVNLPATGLLLLCLLYWMMVIVGAIGVDAIDIDFDTDLNVLDVDGDFDTHTGGFSSFAELMHLNHVPVVLVASVFALLFWAASFLGNHLLNPGGNVLAGLLIGTVNVAACLFLTRLILGPFAEGFKPQENDTTRDRMIGMIGAVTTSEVTESFGQVSIKLDGPELVINARKQPDKPNLGKGDAARILSYNYENDTYMVELCKWEDK
>NZ_CP042912.1|WP_084417262.1|2096418_2098443_-|flotillin
MIDSTILAISPMGWFFMILGGALFFIAVGAFVFMLRYYRKVNQGSAIVRNGMGGTNVSFSGDWVIPILHKAELMDISVKRIEIDRSGEDGLICRDNMRADIKVCFFVRVNKTKEDVERVAQFLGCDRASDETALRALFEPKFSEALKTVGKQFDFVELYNSREKFREQILRIIGTDLNGYVLDDAAIDYLEQTDLEKLNPNNVLDAEGIKKITDLTAEEITRANFIQREKEKTLKKQDVEAREAILALERQQVEAEEKQQREIAEVTARQTADAKVVQEEERQRQETARIRAEEEILVAEENKKRAVIVAAKSKERTEAVETERVEKDRGLEITERERIVTLAQIDKEKAVEVEKKNIQDVIRERVIVERAVVEEEEKIKDTREFAAADRKKQVAVTAAEELAQQQLVQQVQAAEAKKQAATLDAETVIVTAEAERSAAEKQTDAKKMLAEALQAETAAPGLAEADVILAKADAIEKEGTAEAKVAELKFSADARGITEKAEAMKLFDSVGREHEEFKLELQKEKDIELAGIDAQRQIAEAQAGMIAESLREANIDIVGGDGQFFDSIVNSITAGKQVDRLVGESTVLTDVKNTFFNGDPAQLSSEIKKHIDMFGISSEDLKNLSVAALLGQMMGLTNDVNVLGQLQSMMGMANKAGVATENAGAVLKKLSVKS
>NZ_CP042912.1|WP_075085435.1|2090773_2096185_-|AAA-family-ATPase
MPPTETQPDSQSDPNEPTLERGTYEIIQNRLKSHSAELDARLQKLNNERRNVFGAIPTELVSKQRITTEHNCTARDIVPIGDKFLFGYNVHMGLKSVTELPDVFSVYRFEDGSFHEESLDLLSDKQFGVDFHALYKYYKDTRFAKFHVSGPYLYLVFRTGKSLTDIKTFKFLMQGDKLKYIDNRSDHEVKYPPQHEFKWKRTTREFHRGGLHPHISIEDRVYIETVGGDLTVKIEDNTEDGSGIYAEPVDDPDQTLDDAEIFYAIVGNIILMKIKPFKEEQFRYVIYNEKTQTAQRLDSIAESCIFLPEDHGLIFANGYYLQTGQSKIFDNGLTNLAFERRIASPNGEDYLYAFYNQSTGDYALLMYNVIEQRVDTPILCNGFSIFDNGHLIYFKADEEPQKHHAIQIWQTPFVADESASSEQTDSYIFKIGNKEIVRAMAEAHEIMTLIDQEDSYANLYVDIVKRSSDILDSNFWLSDEQTFNLAEPVEAIREAATAAVDEFEKVVRVRSNTAKQYKETAKAAKEVVRNATSGRFDNIDRFVQALSSLRTVRGQVISLKELKYVDLAAVESLESEISENADRLSHKCVEFLLDDAALAPYQQRVAEQNDSIDELKTGVEAKVLDEAIVQVGNELEMLIEIVSNLKIDDPTQRTRIIDNISAIYSSLNSTRASIKKKSQELFSVEGKAEFNSQIKLVSQAVVNYLDVCDTPEKCDEYLTKMMVQVEEIEGRFAEFDEFVVQLAEKREEIYAAFDTKKLQLVEARNRRATALMAAADRILKGIRNRVANFDSVDEINSYFSSDLMIDKVRDIVSELEELEESVKVDDIQSRLKTVREDTIRQLRDKNELYVDGQNIIQFGTHKFSVNVQPLDLTTVIKDGDMHFHLSGTNYFETATSPELNATKPVWDQTVVSENRDVYRAEYLAYQMLRSPDLDLKKLFKADDEKRLETVSQFMAPRYSEGYIKGVHDHDANLILSQLLKMHLDLGLLKYSPKSRAKAAMYWLELGELSPGVKQAWEDKLASLGAATKLFGGLKEREDYINKLRAEILAGEGDIDFQPVDTTAVDTVDARSKKLSSLQNDHRLENVATVSETAEYLYEQLASGGKWPSSKAATELGDRFTDFIAKKKGGNQLAETLGSDSLSIQERFEIACGWVGAFVESNAKTDPHLRDYIEETAAILIEGNADHRKMLDMKTVVEIEGMLGDHRVVDSKIYELDYHEFMLRLAKFETNTVPAYEAYTHLKKEIVDQRREELRLGEFKPRVLTSFVRNKLINDTYLPMIGANLAKQMGVVGEEKRTDLMGLLLLISPPGYGKTTLMEYVANRLGITFMKINGPAIGHQVTSLDPNEAPNASAREEVEKLNLALEMGDNVMIYLDDIQHCNPEFLQKFISLCDATRRIEGVFGGKTKTYDLRGRKVAVVMAGNPYTESGEKFQIPDMLASRADTYNLGDVIGGNADSFELSYLENCLTSNSTLARLNSKSREDVYRVIKMAASKGAPSESLAGNYSVEEVNEFVSVMRKLLKVRDVVLHVNQLYIESAAQADDYRTEPAFKLQGSYRDMNKIAEQIRPVMNDEELLTLIRSHYNNQAQTLTTGAQANLLKLKELMGELEGEELERWEDIKRTFQRNLLLSGASEDDGLGRVIAQMTTVSDGLISIKKAVESGMNQMITASSADPSAERMTTAVSELEKFNKTLTGIKKLMKDGIKTQGSAVVAPATNPVANVHDKGVDPIEVEVINKVPTIFLDIIRNQFRVLQTWMDPILAMAEALPEARGIRDAARVTELNYSELLEKIQKFKEENPGDIE
>NZ_CP042912.1|WP_075085434.1|2087939_2090750_+|PEP-CTERM-sorting-domain-containing-protein
MTDFFRASTLMMSLALFSVAICCTEQSSLAASPQLDGEHGEDGVSGDPGTDGEDGTDGSDIVESATDEIGFSVFGARGGNGGTGGDGIDGDDEGSSAQGGNGGNAGNGGDVHVSRSAPADPDTFFSTAVRGGHGGDGGGGGIGTGFELGGDGGSGGHGGRGIIDGEIGEYASFSARGGDGGDAIGVGAVAGDGGRSYVKSRFLSNFRYATINQNGGRGGAGFDGAEGGQGAGSTIGFNPDQFVFDPAGGGGGGDLNLNVNISGGRGGDSYNGTVGRGGTARLNLAPLAGGASSLGYTVNASIVAGQGGRGISTGNQDTDGATGAIALLNTDDQQLRTSSFFIRGGNGGSALGRQNQGDGGQGAAAIVNGAIRVAESNRFGRLSLTMYGGTGGHAQGTGWSGNGGSVIAPDMELHADGGDYLQVFLAGGDGGWGKRNGSGGDAIIQNQNAQLELGTEVKYLGTYEATAFGGNAGQGKNAVNAATGGNAVAELSQTGYSGINASTVAQGGFGNDGASGNATAKTFAHSLLDDRFDFDNSVTTSAVAATRRGSRGNWRPAYGTNSVAESTAINENEGRTNAVASAYGGWGFLQGGDAIATASSHSMVDGSDSFANAYTRGSGSTNSSDGNLSESTAVATSGLQASSQALANSERIGHNVTAKSLATATGDRIYSNSYASTRTSSWEHYASVRTGSTRSLSDQIVTVDTGSLVQFRSSDAIARPVLEGQMTAALLVNPISDQVAEFFEDESDFGDVFLGSEGSEVIGVGSVFASGVDETQLFSNAHIELDLEIQEEQSGGRFQIGFFGLDDDFGGFEEISVWGTLNGREFINEEWEGEDSATDAMSFFDDLLLDVADTPQNLEHIDLDFHLNFVSNDATDLFGLGFVFGNVEVDELETGLAVRAPSQRFSLGGITAVPEPSSIVVLMSLAVIAGFRRQRS
>NZ_CP042912.1|WP_075085433.1|2083811_2087408_+|hypothetical-protein
MTSSRSRSRARFSYGPLEQKRLLAADLSTATTAEASYYLEDFKQESVARTYLDSQTETADLQTGDVELRLVEIQRGLASTVTRFQQTVHGVPVADAWVATIQGPTGDFVHVHDQSVEAVFDASCEPGKTSINFELSEEIALEYAGAKTMFADTRGELVWLPGEGNDKSASLVWQTTVFAVRDGSVDDDHDHDDGHSHSENEHGDFLTYIDAFSGEVISQENRISHFTEGSGDVFYPNPYQTLGSDTGITDNNDANSTALENQHISVTLEGLDEGTGLIKGEFVDLSTLNSSTITDVDADEADRVYEYTRDDPRFEQVQIYHTVDQINRYFHDLGFDDDTGTPNGIRDFPTLANAHWFTDDQSFYSSGNDAIHFGDGGVDDGEDGDIIAHEYGHAIQNNQNAAWGGGEMGAMGEGFGDYLAASFFQNVGDAAFQATHAAAVGEWDATSYSSDNPPNLRRVDGNKMYPTDLVGQVHADGEIWSRALWDLNQDIGAAAADQLVLESHFLLPGSSSMVTAAEMILMADENLNGGLYESNIRAAFEARGILEAPETIGVVSFDSSVYAVGDTIEIDVADGNAPSNIQVVVTSSNGDSETLSLTGSGSYSTSIVSVEGAVTADDGQLQAAIGDTITVSYFDADDGAGDSFTATDTAVFQNISVYHSEDTPTPINDNSTITSTITIADEGNLLDVDLLLDITHTWDGDLTAVLTAPGGQQFTLFDRIGSSGDNFTDTLFDDDAPDSIDSGTAPYTGTFRPNDAFTSLVGTSITGDWVLSISDAATQDTGSLNNWSLYIVVEIDEPVGPITDSNSATNTVAEDAAIGASVGVTASATDPNDDVTYSLTADAGGLFDIDPVFGVVTVAGALDFESAATHTVTVRADSDDGSFSEADFDIAVTNVNDAVVTTRQLFYLGSDYDTGDAFDSVATDKQFLLPGETATFANYSSYSLGINGLALELNDLNQVPTLANIGDFFDFKVGNDDTTADWTDAPAPISLDYVSNVDASGTDQIVLQWADNAIENQWLQITVNAGNTTGLAAPDVFYFGNAIGETGDSTTDARVDADDVSRVRQNLSGFFSVGIDNVYDFDRDSRVDADDVSIARQNLSGFFPIRLITPGAGKADFGSGSDLLFDAAGDDGKPTTSKEAGLAKRSIVVQTNEKVELSGAIVADNDVAVVESPAQERVKAEAELDRAFVEFDFEAELV
>NZ_CP042912.1|WP_084417296.1|2082501_2083716_+|aminoacetone-oxidase-family-FAD-binding-enzyme
MAAASAAQLGKRTLLLEKNRKFGVKILMSGGTRCNITHNTDARGIVEAFGRNGKFLHSALATMSPADCVELFNSLGVETKVESTGKVFPVSNKAIDVRDALVRYAEDSGAILQNECPVHGMSKLDSGEFVVESDHGSFQCRGVILTTGGLSFPGCGTTGDGYPWARGFGHSIVETVPALTPLLSRCEWANELKGLTIDPTRVEVCEPEKEGAKKKRKPLAKTTGSLLFTHFGFSGPAAMDVSSAVAGHKTKNRLTLVCDFLPAQKMSAVEQQLQTAKSSAGGRSALRVVSDLFPQFPKRLVEQLLAQASVPVDRRFAELSSQQLARISSQLKQLAFPVQGTLGYEKAEVTSGGVKLSEVNSSTMESKLVANLFFAGEILDLDGPIGGFNFQSAWSTGWLAGQSV
>NZ_CP042912.1|WP_075085432.1|2081358_2082330_+|DnaJ-domain-containing-protein
MAADDYYEVLGVSKTATVEEIQKAYRKLARKYHPDLHTDESDREKEKAKQNFQKVQQAYDVLSDEKKRQMYDQMGPGFEQMGGGGQPFPGGQGNPFGGMDIDLSSLFGGGGGRGAPGGGGAGFEQIFRQMGGGGPQQRTQAPAKPEPVEQEITVPFATSVLGGDHQVSFKRTTGKVETISVKIPAGIESGKKIRLRGQGAESYSGQRGDMMIVVKVAPHPNYGRKGLNLLLTVPITLAEAALGAKVDVPTPHGTVTLTVPAGTSSGKSLRLKGMGVRTKDKKGDLIAELQIQLPEKLTEDDEKLIRQLELAYEDKNPRSDIRW
>NZ_CP042912.1|WP_075085440.1|2101530_2102757_-|chorismate-synthase
MEILGGPLFAVAGAGESHGPGITTITFGCPSGIRIERDQIQHFLNRRRPGSNKHGTPRNEADQVVLTSGVFDDQNHDAMLAGPAFSIGGGAEIATYKSGFATGEPIAAFVGSASSKSGHYQQFAGPQGEVRPGHTDLVKHHQSKGFVDYRGGGRSSYRSAISDVVGGSIARAFLAEAFGTRFLSNIVQVGSLKSKRHLADVFDSQDSSATDVDDLEASLAASEIYTIDPEFADAAAKLIIETRKGGDSLGGIVEVIAVNVPPLVGAPLYNSLKLRLMGSLGGLHAARAVEVGSGNDVVTRLGSENNDSIRGDGYKSNHHGGMLGGITTGRPLVARVAFKPTSTITTAQKSVRKDLSEIDYQLDKGRHDPCVAIRAGVALESRMAIELANAVLQHQSGRVHADDFKLFE
>NZ_CP042912.1|WP_075085441.1|2103050_2104535_+|decarboxylating-NADP(+)-dependent-phosphogluconate-dehydrogenase
MPKQGSNRRPSLSEADIGLIGLAVMGENLVLNMASHDFTVAVYNRTTSKVDNFIEGRASGKSIIGTHSLEELCSKLKRPRRVMIMVKAGGPVDAVIAGLLPFLEEGDIVIDGGNSEFPDSVRRTEDLAAKGILYIGTGVSGGEEGALKGPSIMPGGNPEAWPHVKPIFQAISAKTDKGEPCCDWVGRGGAGHFVKMVHNGIEYGDMQMICETYQMMKSGLGMSNDEMHEVFARWNNGVLDSYLVEITRDILGYREDDGSATVDVILDTAGQKGTGKWTAITALDVGQPLTLIGEAVFARCLSALKDERVAASKVLNGPEVSFDGDKAAFVNDLEQALYASKIVSYAQGYQLMRAVSDERDWELNYGGIAMMWRGGCIIRSAFLNNIRDAFEKDSGLTNLLLDPFFEKAVETAQASWRNVVATGVKLGIPLPAISSALCYYDGYRTERLPANLLQAQRDYFGAHTYERLDKERGEYFHTNWTGRGGTTSSTSYNV
>NZ_CP042912.1|WP_075085442.1|2104723_2105215_+|DinB-family-protein
MNVNEAIKLGIDCADMICGAYLDDLTNEEAMQRPHSGCNHVNWQIGHLIASDNAMCNGCVPGSVPALPDGFEEKYSKEKAASDNADDFIPKTELMEIYRNQRQVIKDVLAGLSEEQLSAASPESFQSYAPTVASLFSMIGSHWLMHSGQWTVLRRELGREIVI
>NZ_CP042912.1|WP_075085443.1|2105242_2106781_+|glucose-6-phosphate-dehydrogenase
MDMSTRDIEPVVFVIFGASGDLTRRKLIPAIYDLFKCKLLPENFALLGVSRSKLSDDDFRQKAFLNNELFDISEEPAETVEAFAKLLFYQPIDTNSSDDYAKVKSRLDQLDGEFKTAGNFVFYLSTPPVLYDKIPAFLSAHGLNRCEGSFRRLVIEKPFGYDSQSARELNKSLTEYFPEDEIYRIDHYLGKETVQNLLVTRFANSVFEPLWNRNYIQHVQITSAEPIGVGNRGGYYDESGALRDMLQNHLMQIVAHIAMEPPISPSAEAIRAEKSKLFQSLRPIAESEVAKYCIRGQYMASKMRGEMVKGYREEEGVPSESKTETYAAVKFFIDNWRWSGVPFYIRTGKRLPTKVTEVAITFDRPPHKIFRTDQDLHLAHNQLVMRIQPDEGLLLSFGMKVPGEGFDVKNVGMDFHYSDLAEADVPEAYERLLLDCIKGDPTLYAHGDSVEYSWKFVEPILKAWKNDDSIPVYGYPAGSWGPELADDLIEPAEITWRNPCRKLTEDTSFCEL
>NZ_CP042912.1|WP_075085445.1|2107054_2108053_+|hypothetical-protein
MSANHSRTETSYIDRNQFLDVYPICSRLVSEIGRVFIRSWTDEQASLHREELVGRLIESGVSKAKAEIAWKLIVQDHAKSGARSAPNSDSVSAMNLNVSAANSANGNSEFRNSGSGAQTDENIFSFEHGRWVVRYLGQTIYPQDITGIKYLHCLIANPGVTFSPQELYNGFGGRKTRQRPKAMSAGDALRTGVGFEPTKPDVLIDQQGRKAMLARLESIESEMANAKLVPDADLIEKLVAERIGITAHLRKAFTPVGSRRIQEPDLVRRMKAVDIAIRRAKEKIQRAGHYELLRHLNDTVEVKVKSGCRYHSTAEPVWRTSAVAFIAPNQPR
>NZ_CP042912.1|WP_157665197.1|2108494_2109979_+|hypothetical-protein
MGKIERQLTDSDCAVWAIKAICFQAGVSVPPANTIRRHIDLEDGGTSIRGVRDALSEFGVSAQPVQGPSDAIDQAPLPAIALIRVAGTLLHYVVVLEANRNRVKYLDPGIGGVAVEVSSSQFADVFTGSLILCERKPDYVAVDFGQEIDANRFLVGAVAHESNAATALCIGEVFQLALLLIGILMLKNFFSSSSLGTPNFWYLGGIAICAVLYLWIGKLHHLIKADVKSRALLSLFNFSTSLIEQHEFDPKKGLRQASSRCVGAVTSVADSLTNLISFPGNTASLLLYLGLMAWFDLYAAGYATLLGVALTVYCVWFSSASRRSHREVLRVRDRNEAGLAFLMANVEPESKVVTDMPWSQLAYCDAVAKSDNFTSLDGTVSASVGRANLIAGLLIGGLQHTTLGMGHTMAVFFMLSIYTSIIVRWSKRVASIPECRFHVRRLLDFLSDFTSDSLQYSVVRNANPKSRVGAPSITTLSVPESSGNELTVEAGGVL
>NZ_CP042912.1|WP_075085448.1|2109975_2111244_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSHHLQVASEFYRVARGKKPAGKLLIQLTFAILILTIWASLTPISETVSHTVKIVPNASGFESSDGALFPNSSTSGSVAEMLCGELESVRKGDVLARLDTREIAAKRKGELQKIQNFELEIEAKSVQIELAAATFRTQRAELLAQLKSEQQIDSKRSEERSIQIRSATSQSQHLEREWARAQKLASRNAISQSEAAALQADFEKAKQDLAMAQLPIADSKIAELESRIESLVASHEEQVHSIETERLGLQNRLSAARNEVELLELRIRQCEIVAPSDGQVSQCSLRVGDWVSPGVVGITVSKNGFMAETLLPSSKIGSVKTGDPACIVVDGIDWLVNGSLKARVTEISPDLYQKEVVQGDGSRVRVDGYRVRLELDADRNDFERWDSIRLGMTGIVEIETGQKKLAIHLLEQALGNDWLSGK
>NZ_CP042912.1|WP_075085449.1|2111321_2111630_+|hypothetical-protein
MNSTTTNDGLNTNSGNSAFVPMTESQMESTKAGTDWVEWFIETAEEVGNDVTAIYDHFVAQLVPLDVNNIPWEDLLMEMQNHGFVYPDPNEGDPTLTDDGTW
>NZ_CP042912.1|WP_075085450.1|2111655_2115342_-|serine/threonine-protein-kinase
MSNSRLRALKQIDDICEQFELMLKQGQQVEIANWIQLVHEDDQSELFYELLRLETHHDLASRSSNSIGDYFRQFPEFSNEIVKVFARNRGDDSETSSLPVSHSPMEPVSVGDFISRFRIISPLGAGGFSAVFLAHDPEINQAVALKVLRPDVVVEDSRYLECIVNEANVLSRIDHPAIPKVFDVGEDDDGRPWVAMEFIKGESLYKTLATDQHSLVEVLRILVRTAKAVHEIHQAGFAHRDIKPDNIIIGLDGEPRILDYGLALHENIQRRKSGERAGTTAFMSPEQVRGENEDLDGRTDVWSLGVILYLVVAKRLPFHGETKEDTRRDILKQPVKPPRQIKNNLATVELENVCFRALKKHPEDRFPTANDFANELQAAIDVLPAEFLLQDASRTRKLSTRENCELQLARQARIWTAQPSARNLPGPVRFAKFRMWTDKGYWSDSESSLMTAASKRLLKYGYAFAAIAIILAFTQYRVRESSLDARVQETVAAVREAPIPEVRSVFDSMSSFAPDRCLDAVQTAFDESQPVDEISAEGLRYAIILADLHPEYREIFRNSIITADADELYVLVELAFGDGEDDLLEPIDEQLRKRLVNLISRSHDAGIERLWPAAPEEYAERFDSLNGSMTPRYAYCPQMRLGEFKKTCEELREYRYCPVNVRPWKDKLNNTFVAAIWHRSTSDWKISWDLSPTDFLAMKSRENMNLVDVCDGLNSNDEDPLLVAVWSREKNPYGKARQMLLAEKIPQLFDPAWSQKFDPNYSVIGKDIESYYLEDTPLLVDVSVHNDHTFQPLVSREQEKIRVGEMILNACAPGEEDVPDPRLANRLEAAENLKAEAYYTLRRFDRSSDHFQKNASEEGTWQDELTRTLSFTRSGDMVNAHYSKAVLTRKMNFAVKNGTRPYLNYSVARAINGSLNAEMEFWQSRDVTEFIDFVKTRIEFVEANPSATFVTPWAEYYALALATSSVSQAIAITGEQSSKDAKVLGQLKSKLVQESLVLKPSLRRRYAKWVEFQSTLNLPTVVPLLHEIEQPIRSSAWSTHASMCESRFVELRSPLAHAAECARFERGFFPVSIVLGKTVRGRPRVGSVWHYELETAEFVKREQTLANAFCYALRHDEDLGVWKILGSPDTDTLKRRIIDTISRFDVDPLILVRRLGQTSSPSEQLSILKSLRQYSVADIDLHKIDDILNLIKPIEAAGSSEHRQLCKIIRINLTAVQIANTNKNRVRY
>NZ_CP042912.1|WP_075085451.1|2115334_2115934_-|hypothetical-protein
MEMNSSVTDWITQLRNGHSSACDKLWPFYLQRLTAIICQKLESSRTEVSDEEDVLIDTCEVCFRKIKEGVYPNISSRHDLWRLLTKIATRKSIDQIRRSRKGVDRLRQEATQTINSTNDSFEVNHIDSFPGAEPTPEFAAMVADESRYRLSQLPEKMVDVVKLRLQGFTLKEIAAKTGVSLPTVQRYLSFVREAWSQDE

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Crispr_ID: NZ_CP042912_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_4

2184863-2184985

Orphan

Consensus_repeat	Method
GAACAGGAACCTGAACAGTGTAACGCT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP042912_4

>merge|NZ_CP042912|4|2184863-2184985|PILER-CR
GAACAGGAACCTGAACAGTGTAAGGCTGATCAACGTAGATTGTTGAGCAGGTTGGAACCTGAACAGTGTAGTTCTCTGTGCGATACGAAGTCGACTGAACAGGAACCTGAACAGTGTAACGCT

>NZ_CP042912|4|2|2184863-2184985|PILER-CR
GAACAGGAACCTGAACAGTGTAAGGCT	GATCAACGTAGATTGTTGAGCAGGTT
GGAACCTGAACAGTGTAGTTCTCTGTG	CGATACGAAGTCGACTGAACAGGAAC
CTGAACAGTGTAACGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_084417275.1\|2191925_2192705_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|275103
NZ_CP042912.1\|WP_075085486.1\|2177026_2180233_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NZ_CP042912.1\|WP_084417273.1\|2173068_2174337_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	unknown	unknown	gnl\|CDD\|238430
NZ_CP042912.1\|WP_157665200.1\|2186946_2187930_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP042912.1\|WP_075085483.1\|2174339_2175389_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP042912.1\|WP_075085494.1\|2189350_2190205_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224017
NZ_CP042912.1\|WP_157665198.1\|2175533_2176343_+\|glutaminyl-peptide-cyclotransferase	unknown	unknown	gnl\|CDD\|368283
NZ_CP042912.1\|WP_162273978.1\|2194312_2194864_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP042912.1\|WP_157665199.1\|2186184_2186361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085481.1\|2171807_2172935_+\|GNAT-family-N-acetyltransferase	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085642.1\|2186661_2186862_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP042912.1\|WP_075085488.1\|2181207_2181570_-\|glyoxalase	unknown	unknown	gnl\|CDD\|319909
NZ_CP042912.1\|WP_168211076.1\|2176575_2176950_+\|four-helix-bundle-copper-binding-protein	unknown	unknown	gnl\|CDD\|153434
NZ_CP042912.1\|WP_075085495.1\|2190207_2191005_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349977
NZ_CP042912.1\|WP_075085489.1\|2181573_2182947_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP042912.1\|WP_075085480.1\|2170691_2171666_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187539
NZ_CP042912.1\|WP_075085493.1\|2188322_2189366_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369680
NZ_CP042912.1\|WP_084417276.1\|2192938_2194243_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234824
NZ_CP042912.1\|WP_148618705.1\|2180446_2181067_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085496.1\|2191014_2191761_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_084417275.1\|2191925_2192705_-\|glycosyltransferase	gnl\|CDD\|275103	TIGR04283, glycosyl_transferase_family_2, transferase 2, rSAM/selenodomain-associated. This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine. [Unknown function, Enzymes of unknown specificity].	1.08078e-31
NZ_CP042912.1\|WP_075085486.1\|2177026_2180233_-\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	3.12614e-74
NZ_CP042912.1\|WP_084417273.1\|2173068_2174337_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	3.12363e-109
NZ_CP042912.1\|WP_157665200.1\|2186946_2187930_+\|hypothetical-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	3.56986e-22
NZ_CP042912.1\|WP_075085483.1\|2174339_2175389_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.91343e-54
NZ_CP042912.1\|WP_075085494.1\|2189350_2190205_+\|hypothetical-protein	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	2.40793e-39
NZ_CP042912.1\|WP_157665198.1\|2175533_2176343_+\|glutaminyl-peptide-cyclotransferase	gnl\|CDD\|368283	pfam05096, Glu_cyclase_2, Glutamine cyclotransferase. This family of enzymes EC:2.3.2.5 catalyze the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.	9.59133e-99
NZ_CP042912.1\|WP_162273978.1\|2194312_2194864_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	2.08021e-13
NZ_CP042912.1\|WP_075085642.1\|2186661_2186862_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	0.000201174
NZ_CP042912.1\|WP_075085488.1\|2181207_2181570_-\|glyoxalase	gnl\|CDD\|319909	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.80489e-27
NZ_CP042912.1\|WP_168211076.1\|2176575_2176950_+\|four-helix-bundle-copper-binding-protein	gnl\|CDD\|153434	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	3.27993e-23
NZ_CP042912.1\|WP_075085495.1\|2190207_2191005_+\|RNA-methyltransferase	gnl\|CDD\|349977	cd18104, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	4.13359e-62
NZ_CP042912.1\|WP_075085489.1\|2181573_2182947_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	5.28833e-28
NZ_CP042912.1\|WP_075085480.1\|2170691_2171666_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187539	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs. This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.6016e-79
NZ_CP042912.1\|WP_075085493.1\|2188322_2189366_+\|hypothetical-protein	gnl\|CDD\|369680	pfam08070, DTHCT, DTHCT (NUC029) region. The DTCHT region is the C-terminal part of DNA gyrases B / topoisomerase IV / HATPase proteins. This region is composed of quite low complexity sequence.	2.55464e-05
NZ_CP042912.1\|WP_084417276.1\|2192938_2194243_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|234824	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0

>NZ_CP042912.1|WP_075085489.1|2181573_2182947_-|Gfo/Idh/MocA-family-oxidoreductase
MGTRRTFLQQSAAVSALPFVSSISQPFARLANRNSRLQYALIGAGGNGTRTAPVAQKFVDMVAICDVDTRHLERGNEMLTGGKADTYRDYRKVLARDDIDVVQISTPDHWHTKILIEAMLAGKDAYCEKPLTLTIDEGKLIRKVQKETGRVVQVGTQQRSSFDLFNKALAIIADGRLGKLHTVTTNIGSGGWSPEIPLADVPKELDWDRWLGPSPEMPFRYAVDPKKPDRKYTNGHTQFRWWYEHSGGKLTDWGAHHIDIAMLGIAAAGQNNDPVSVEGTSKHAVEFKDGIPLQDDRYNTAQKFDLSVAFADGDVNLKIQNGGDNGILFEGDQGRIFVNRGKLVGAPVEGLKDKPLPEDAIAKIYRGMTINGNNRDAHWANLVESIEKRTLPISDVHSHMKMLNVCHLAGICCRLGRKIHWDQASETITGDELAASMMKRPYREGYEIDMGTLVGNK
>NZ_CP042912.1|WP_075085488.1|2181207_2181570_-|glyoxalase
MNILQLDHVALHVSDLAVSDKFYGDVLQLPAIPRPDFDFPGAWYSIGSHELHLIGNRDKEVHSHHRGTHFAVRVSDCDVVEERLTSCGIDFIPKTRPDGARQVFVQDPDGHFVEFTQPPA
>NZ_CP042912.1|WP_148618705.1|2180446_2181067_-|hypothetical-protein
MPYHVPFEHRRRPQPVYIGFDVPQRPRRKFNWWGFWGLLMSLGSFLTAGFASPLSLLVSLNGMRKKKGPRKAATAGTVFSLMGILLAGSIVTFAVNEEHAHRQKRMERKLQREVAAQVEETQVAIAIAERELDEFRGETGYLPTGIDGNMLMLKHTDAWGKEIRYDAEASPALLRSAGPDQTYNTDDDVTSEVEGEVDSSGAIEVQ
>NZ_CP042912.1|WP_075085486.1|2177026_2180233_-|PAS-domain-S-box-protein
MPNSREELQRLNDELAKVNLEHERKIAELTELTDDMNSLFALTDVGVVFLDRNLNIRRFTPRIGQTIGVTASDLGRPIKQFIARFFIDDVDDCFSTVLKTGDRVEREVSDRDGGYWLLKIMQHATKTGSEGVVLTMVDIKSVKETDAKLERYRSIIDSTHEAVIGTDLDGYIQSWNQGAAQLYGYTAEEATGQHVAMLMPDSVKPEVPKLLKQAISGIPIKGYQTDRICKDGSTIHVALAVSPVHDASGVVVGVSSISHDHSQQRKAELEQKKLATILELTSDFVGVCDGNGTTLSINAAGRRMLGIDPDYDIVGDPIKNWHSPEDLKVIFEEALPQSIEKGEWRGILSAVDRHGHQTPLSAVIIAHKGSDGSVNYYSMVGRDITQQLQFEDQLKDREIFLRRTLDGLYAFAGVLLPDGTLVEANLPALSAANLKAEDVIGTPFPDAYWWAYSEEVQEKLWDSIRTAAAGNLVRYDVDVRLAEDHFICIDFQLTPLRNDAGKVTHLIPSGINITDRVELETRQRVFRHAFESSLTAMVITDPTQPDNPIIYVNPGFEKLTGYTSADAVGKNCRFLQGPETNPETVGEIGVGIRQGRATHVTVLNYRKNGEQFWNELVITPVHNDQEVLTHFIGVLFDMTEHQEVEANLARARDVAEAANAAKSSFVANMSHEIRTPLTTIVGMTEMLLEQESDQATRDTLQLIHQSGRHLATLVNDVLDLSKIEAGKLEADFSDASPMQIIEDVAASMRYRAEEKGIKFRLKFSGMVPEAIRTDPLRFRQVLFNLTGNAIKFTEVGSVELRCEVEPGGSDPMLKMEVDDTGVGFAPSEVKRLFEQFTQVDDSPTRRQGGSGLGLFISRRIAELLGGQLSATSKPSGGSVFTLRLPTGDLSGQTMIDPNATLSQQQSADRLKNRLPVRLDNRRILIVEDTRGIQLLLKRILENAGAIVEVADDGQHAMETIQASLFGKSPDSGRPDSGMGNGEPGCRPRHDLILLDMHMPRLSGYETAALIRKLGLTTPIIALTASAMRGDRNKCIQSGCDAYLTKPIDRQKLMKKVVRLLGKADAATD
>NZ_CP042912.1|WP_168211076.1|2176575_2176950_+|four-helix-bundle-copper-binding-protein
MAFATQVVSPDCPSKFQRERAVNKFQSCIDACQQCIIDCQNCLGETITKSSGNDCPACCLECTELCELCVRLMSRGGKFSKEICRICAGACDWCAEQCGAHDHEHCKRCAESCRKCADECRKMA
>NZ_CP042912.1|WP_157665198.1|2175533_2176343_+|glutaminyl-peptide-cyclotransferase
MPTSRTRWELVALFLVIAVGGTYLAVWMKTGDAIPEFGYKVVDKFPHDEKAYTQGLLFHDGFLYESTGLTGQSSLRKVEPETGVVLKQFDLSDELFGEGLTWFNDQFIQLTWQNDTGIVYKETDDGFEEVKRFPVDHEGWGITDDGNSLIVSDGTANLRFLDPDSFEETSRLYVRRKDRRVLGQLNELEHFGSKIYANIYNSDKIYRIDENSGDVEAIIDLSGLWPFSDRPRGNNAVLNGIAIKPGSNGTMWVTGKLCPYVYEIEIVPK
>NZ_CP042912.1|WP_075085483.1|2174339_2175389_+|Gfo/Idh/MocA-family-oxidoreductase
MSLKVGIVGIGFMGWMHWLAWKNVGGAEVVAVCSRDAAKRAGDWTTIKGNMGPPGEQVDLSQIKAFETLDAMLADDEIDLIDVCLPPAMHRDAIIACAKAGKNIFCEKPLALNLLDCDAAIEACDQNEVRLFVGHVLPFFTEFSYAVKLIRSGEFGKLLGGNFKRVISDPFWLEDFYNREKVGGPLLDLHVHDAHLIRVLFGMPKTVYSGGRFKNGVPEYCNSVFTFEDADVSVACTGGVVRQQGRPFNHAFEIHLEKATMCFEFAAHADEAETIRLKILKEDGSVERPEDLGDPDSIFAFQREMEELVEAIFTGRDSDSLSGASARDAIAICEAEEKSLLNNTLVELG
>NZ_CP042912.1|WP_084417273.1|2173068_2174337_+|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein
MNSTGDVVVSGMGVVSPIGVGIDSFWQNLLDGVSGIRVRESFAETDMPLRIGAPIADFDPKPFVKPRKALKIMCQPIQFGCAAANLAFEDAGFEKQSLESVVSPDRIGTLFGTETFFADPAEVARVFRSCTEDDNYQHDRWGEFAMRQIQPLWMLKYLPNMAASHISIAIDARGPSNSICQGEASGLLALIEAADLIKRGVVDVVIAGGTGSQMALTAMLYRGIGDLSRRINEPEKASRPFDAERDGMVIGEGSGVVVLESAEHAAKRGATPVARLAGWSRGFSDPNRVERNEAFVASIKAVLADSGMTPDQIGLVSANAHGSIEGDASEAQAIQSVLGDVPVVAHKSNFGNLGPGTSVVELIGSLMALKHRKIPPTLNYENPDPDCPVNVSNEVRSMDKSAMLKTGCSGTGQMVSVVFEGM
>NZ_CP042912.1|WP_075085481.1|2171807_2172935_+|GNAT-family-N-acetyltransferase
MSSISVIPVSTKAQQKAFVHFVWDHYQGDPNWVPPLVHNVKELLNYKKHPFYDDAECQTFLAMDGDKVVGRIAAIIDHNHNRHHDELRGMFGFFESIDDQDVANALFDAAKKWFSDKGIGLMRGPANPSQNYEWGMLVEGFHSPPTFLMTYNKPYYDKLVLGYGFEQSQDLYSYNAPVEMLENLDPKLLFVATEATKRFNVDVRPVSKKEFAKDVGIFLKIYNSALQAQWGFTPMSEGELSSTATNLKFLIATEMTSVAEVDGKAVGIVFGLLDYNPLIKKINGKLYPFGWLRLLWGRKKLKRVRLMSTNVSPEYQRWGLGIVLMARMVPEVLKWGIDEGEFSWVLESNKLSRGTLERSGLTSDKTFRIYDYTPS
>NZ_CP042912.1|WP_075085480.1|2170691_2171666_-|NAD-dependent-epimerase/dehydratase-family-protein
MKILVTGATGFLGNNLARKMLQQGHEIVTTVRATSDLRPLDGIDVEVIHADLTDPNAMAPVVEDVELIVHCAAMIQIGHSKRESCTAFNVGSTKLLAEAARRREIRMINVSTVDTMAAATDGVPVTENSADGPKYDCSYVFSKRAAASAFMEEVEKGLDGVTVCPGFMLGPNDWKPSSGEMLLFVAKTPLFFVAAGGCSVVDVRDVADGIMLAIKHGKTGEKYILAGENISYMELWKRMAKIVGCWPPRRKVSNFVAGLAGRTGDLISKFTKEELALNSATITMGQMLNWYSSEKAINELGYSIGEIDIAIEDAWKWFKLHDYA
>NZ_CP042912.1|WP_157665199.1|2186184_2186361_-|hypothetical-protein
MSEPSQSNDPRANLIEELLTRQDEVIRRLDELDTQLIRTIESIRPPQDADAEPTKKAA
>NZ_CP042912.1|WP_075085642.1|2186661_2186862_+|30S-ribosomal-protein-S21
MVKLLVREKESIQEAVRRFRKLVERSGIKKEMRRREFYEKPSETKRRARLRAERRSKRNRMLAARR
>NZ_CP042912.1|WP_157665200.1|2186946_2187930_+|hypothetical-protein
MNPKTIVTILKYIASIGLLTYLIYSRRDQFTAFLEQEKNFWWLAAALATMTTAFMFSYLRWQWLANAIRLDLTLGEAIKLGFIGAFFNVVAFGVVGGDSLRAFYAARTKKGRVPEAILSVFIDRAIGLMVMCGFAGLAWQINGYFGNAAETKEQLAIASICNTAGILSLLGAIGLMAFLMFPGIRKFAPFRALTKLPKVGDLIDQGMEAAALYSKNQKAIGMAIVFSIASNLLFATTIWLVSLGVSESPPSFVQHMVIAPIAMVANSIPLPGGVGGMEVALAAMYESYGASSGVIVAICYRLCILFVSLIGWIVWLVGGGDKMRVES
>NZ_CP042912.1|WP_075085493.1|2188322_2189366_+|hypothetical-protein
MLIEFRCGNYSRFDAATGQYTVCGQRMQADAEDAGMIVSCPRCKQDCEVPVPKKARGAGKRKSSDQGSPEGKPNPRKSANPGKSGAANSAAKKAPASLEEEALIAQSRQRPTAAAPKAKSQRCPKCGGVLDSRGVCGECRWVRPRFAKANQSLEEMEMEPAGMMLWFSQILSEGVPMNLLCMAANIAIPMLLSALMAFALFVMGGFMGGFFFLIMLAMLLLYIGLAYKGYQFLRDGNARLAWFQKPFWNGILAFCRSRKWKGIDAKLKNRNVVDFHGEAITDEQLIAQKEFRSAQVLDLEGTLITDKTIEQLYQLKYLQCLVVRNTEVSHLAVTRLQQSFPKLWIWH
>NZ_CP042912.1|WP_075085494.1|2189350_2190205_+|hypothetical-protein
MDLALVFESEQYELIDFGDGTKVERFGDRIVARESPSVEMFEPKMPLGEVEVDASFDSRDGDCRWHGELDSEWATSHSQSQFSLRQTPTGQVGVFPEQAANWDWIAKHADVVSGKKAINLFAYTGGSTLALAAAGAHITHVDSASSVVTWARENAAKSGLADRPIRWIVEDAMKFVQREIKRGNSYDIFVADPPSFGRGKKNETWKIERDLEDLVELAKALCPDPKMVILSCHTPTWDASDLEFVLERQFASHSEKFEAFALSLNTNDGRTLPSGDCARFVVED
>NZ_CP042912.1|WP_075085495.1|2190207_2191005_+|RNA-methyltransferase
MEVISSHQNPRIKKLIKLHSSRGRQKQNRIAVFGSREILRALRSGVAPDEIFVCEPLADAKILTEIRELVAGFESLTRLVPTELFEKICFGDRTDGIVMTADRPELSMDRVFDQSPAPIIAVVESIEKPGNLGAILRSADGAGLDGLIVADPLTDWFHPNTIRSSLGTCFSVPGSVIDTETLRQRLIDDEFQVIVASLQGATDFYEADLTKKTAIVLGNEAKGVSDAWVRGEFQMAKLPMLGIADSLNVSATAAAMFYEARRQRR
>NZ_CP042912.1|WP_075085496.1|2191014_2191761_-|hypothetical-protein
MRQLYCTTGIAFSALFLAMACLFASSSADEVIIEEGLSRANIAIGDYSCSPCLSKLVAASFEMKGDQNLGTVELTAGELWQFFNDNGYDSVNTMTLFLDVDQISSEDSFNLSKLNVQIQSPIGGNLLTDTNLGAHQIIVPGYETSSSRPEAELKFDLGYDFMKLFTPESTELVRVSINTPVDGALAPTFHLTANDGVFGQTNLGQMFMFVLFWGAVFLVLLRWMKPVRTAIPVRPVTARPIAVRQRTA
>NZ_CP042912.1|WP_084417275.1|2191925_2192705_-|glycosyltransferase
MHLMNVDGKPSRPTIGKHRSDWRDFTIVIPAHNEENYLPNTLATVQQSLQEIDHPAKVVVVNDASTDLTREVAIEHGAEVIDVSLRNIGAVRNAGARTCDTPWLFFLDADTLLPAATLAAALDQLAKGAAGGGAAVDIAPEIKLSVVKWAMFYAVKIGWQSIGGWAAGCFMFCRKDAFEAFGGFDEDFYAIEELFFSRGIASQGRFSMLRQSVVTSARKLEAYSTLELLRFVTLPIMQPTTLFKSKVGLELLYDDEKAR
>NZ_CP042912.1|WP_084417276.1|2192938_2194243_+|glucose-1-phosphate-adenylyltransferase
MKDVMAVILAGGKGSRLEPLTRDRAKPAVPFGGGYRIADFALSNCLNSGIRKILLLTQYKAISLDRHINTGWRQFFCRELGEFIDIVPPQQRIDEHWYQGTADAVYQNIYTIEKEKPNSVLILAGDHIYKMNYGAMVDYHEKMKADLTVAALQVDPEEAKSFGVMQVNEQNRIVGFEEKPDAPKSIPGDPNQCLASMGVYVFSARFLFEQLLRDANQPDSQRDFGKNIIPSVIDSHRVFAFPFQDENRKSQAYWRDVGTIDAYYDANMDLISVDPMLNMYDQQWPIRTFQENCPPPKFVFGGDDEEGRVGMATDSIVCPGSIISGGRVERSIVGLHCRINSFANVSDSILFDSVTVGRHAQVRRAIIDKGVSIPSGTRIGFDLEADRKRGLTVTESGIVVIGKGDVISKVHDEANAEGTVPAPHLNQKTQRQNR
>NZ_CP042912.1|WP_162273978.1|2194312_2194864_-|RDD-family-protein
MSELNPYAPAPVDQTKTPLAVSELPLATLWQRFAGNFIDSILLLLVMMVPYFVLIMVYGILVDPSYFETASLEPRHLQDFVAETVLMLISLTAAFFLLNGYLLAKQGQTIGKLAMKTRILGDDNQLVPLGRLFLMRYLWLWLITIIPVIGGLIGLVNAVSIFGADRKCLHDKVASTKVISLRG

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Crispr_ID: NZ_CP042912_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_5

2493367-2493478

Orphan

Consensus_repeat	Method
GCAAACGGTGGAGACCACCGTTCCACTTATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042912_5

>merge|NZ_CP042912|5|2493367-2493478|CRISPRCasFinder
GCAAACGGTGGAGACCACCGTTCCACTTATGAGGTGGCATAGGCTTCCAGCCTGTGGTTGCATTGTTGGCCAAGGCAGGATGCAAACGGCGGAGACCACCGTTCCACTTATG

>NZ_CP042912|5|2|2493367-2493478|CRISPRCasFinder
GCAAACGGTGGAGACCACCGTTCCACTTATG	AGGTGGCATAGGCTTCCAGCCTGTGGTTGCATTGTTGGCCAAGGCAGGAT
GCAAACGGCGGAGACCACCGTTCCACTTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075082200.1\|2489062_2489509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075082203.1\|2491377_2493309_+\|mucoidy-inhibitor-MuiA-family-protein	unknown	unknown	gnl\|CDD\|274045
NZ_CP042912.1\|WP_075082199.1\|2487572_2488811_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP042912.1\|WP_084416790.1\|2499170_2502218_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP042912.1\|WP_075082206.1\|2495385_2496309_+\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|366491
NZ_CP042912.1\|WP_087149594.1\|2503566_2505249_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP042912.1\|WP_148618759.1\|2486196_2487162_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_157665014.1\|2505540_2506308_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_148618760.1\|2490437_2490860_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_148618758.1\|2481954_2482839_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042912.1\|WP_075082201.1\|2489681_2490272_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075082363.1\|2506405_2507770_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP042912.1\|WP_075082195.1\|2483108_2485610_+\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319849
NZ_CP042912.1\|WP_148618757.1\|2481652_2481958_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP042912.1\|WP_075082211.1\|2507808_2508963_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375248
NZ_CP042912.1\|WP_075082827.1\|2480222_2481077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237191
NZ_CP042912.1\|WP_075082207.1\|2496386_2498990_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173810
NZ_CP042912.1\|WP_075082204.1\|2493491_2494313_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|367711
NZ_CP042912.1\|WP_084416772.1\|2502368_2503574_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP042912.1\|WP_075082205.1\|2494618_2495392_+\|isoprenyl-transferase	unknown	unknown	gnl\|CDD\|184840

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075082203.1\|2491377_2493309_+\|mucoidy-inhibitor-MuiA-family-protein	gnl\|CDD\|274045	TIGR02231, Hypothetical_protein_ZK1055.6b, conserved hypothetical protein. This family consists of proteins over 500 amino acids long in Caenorhabditis elegans and several bacteria (Pseudomonas aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans, etc.). The function is unknown.	2.74237e-61
NZ_CP042912.1\|WP_075082199.1\|2487572_2488811_+\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.43644e-16
NZ_CP042912.1\|WP_075082206.1\|2495385_2496309_+\|phosphatidate-cytidylyltransferase	gnl\|CDD\|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	1.11127e-37
NZ_CP042912.1\|WP_084416790.1\|2499170_2502218_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP042912.1\|WP_087149594.1\|2503566_2505249_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.03419e-62
NZ_CP042912.1\|WP_075082195.1\|2483108_2485610_+\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP042912.1\|WP_075082363.1\|2506405_2507770_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.65797e-30
NZ_CP042912.1\|WP_148618758.1\|2481954_2482839_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.8991e-74
NZ_CP042912.1\|WP_148618757.1\|2481652_2481958_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.1959e-08
NZ_CP042912.1\|WP_075082211.1\|2507808_2508963_-\|hypothetical-protein	gnl\|CDD\|375248	pfam17675, APG6_N, Apg6 coiled-coil region. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway.	0.0010291
NZ_CP042912.1\|WP_075082827.1\|2480222_2481077_+\|hypothetical-protein	gnl\|CDD\|237191	PRK12757, PRK12757, cell division protein FtsN; Provisional.	0.000140456
NZ_CP042912.1\|WP_075082207.1\|2496386_2498990_-\|S8-family-serine-peptidase	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	1.73625e-18
NZ_CP042912.1\|WP_075082204.1\|2493491_2494313_+\|phosphotransferase	gnl\|CDD\|367711	pfam03881, Fructosamin_kin, Fructosamine kinase. This family includes eukaryotic fructosamine-3-kinase enzymes. The family also includes bacterial members that have not been characterized but probably have a similar or identical function.	8.51719e-87
NZ_CP042912.1\|WP_084416772.1\|2502368_2503574_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	9.42616e-29
NZ_CP042912.1\|WP_075082205.1\|2494618_2495392_+\|isoprenyl-transferase	gnl\|CDD\|184840	PRK14830, PRK14830, undecaprenyl pyrophosphate synthase; Provisional.	1.37965e-125

>NZ_CP042912.1|WP_075082203.1|2491377_2493309_+|mucoidy-inhibitor-MuiA-family-protein
MNRRFRYSCLLIATLLASVIANPVAFADDGPEETVLESKVTEVTLYRTQALVTRTIELDGEPGAKELVIGDLPENIDPATLFAESDSGVEVRAVRYRARAVSDSPREEVRVLEQEINDFQEQLRVNEKQIDLLKKQAKYLDKLESFTAPTADFDLGRGVLNAETIEQLTNFSFGQRKEILESEVALTKTQQSLKKQLELAQRKIREISNGSTRQERQAVLFAQKTAAGKQSIRLNYLTNSCGWSPAYTVRAATGADTVRIEYNGLIQQMSGEDWDDVKLTLSTASPALSAAGPGLAPFRLTLRPNADPFANSMGGMGGGGMGAPNQQQAQVMMMGKPSDLKSLMRVQSEAIRGNRVATSNADNLKTAWTINNVVNNFDCLAITSDTPIDAMPIGEAGQAGEAGQAGEEPALSYEIASAVSLQSRKSQQMVRVMAEDLDSEFYHIATPVLTSYVYREAELSNNSQSDLLAGPLTVYLDGRFVGRSEIPTVARGQDFVVGLGADSQLRARRELADRSNQINGGNRETSLDYKLFIENYKDTLAKIRVVDRMPIADDESKIRVTLGDGVEDQLSKDGVYVRTMLPKGILRWDIDVAGRSIGESAHEIAYSYSLEYDRQYVASLPSNVQEQQIEYNDLENTRRGGKR
>NZ_CP042912.1|WP_148618760.1|2490437_2490860_-|hypothetical-protein
MRPTGEAHIRFSTRTLLIVVAFVAFALASVFAVSRWVDPFDDRNFDSQQWATASSDNRAPMARDVVSRVRGMDRDGVIELLGQPGDRLDSATDAGGHPLRGAEVFSYYIGSWSMHGMDDAFVYVHFDTDGAVIHSEITGY
>NZ_CP042912.1|WP_075082201.1|2489681_2490272_-|hypothetical-protein
MNQRDRAAKLAKTDFSAALKLARDITEVRERIQSLGWVARYAPAAEIPRVVAMAAKSAGTSSDFYADTMALAWPLRALHDTGNGGSIPPLLKTAISLSADVQPASSRAEALGLLIHAVLPDGLRTAEPAIAKLKSVASDSHWRVVRSLIDAALLVNAFDRQSALSIANAIPLENKRNSAVQRLSDGETMEPRPFFW
>NZ_CP042912.1|WP_075082200.1|2489062_2489509_-|hypothetical-protein
MSESVFKFYPLEPTRGFLPGEADTIISAFSDANDLSIAADSIRVHDHCGVQFIDCGSSLERIACPLCGAAIPMTHWQSAMDADFDTSAGFALASFIQCDCGRQLPLHGLRYDAHCGFSRSWVSVVVHSHFWLGWMLQYPWIGHVEAHV
>NZ_CP042912.1|WP_075082199.1|2487572_2488811_+|site-specific-integrase
MSDKDKRHNEEIHCRYFRWLVYLRNGVLTADGRGNPVNAGRRSLRTRKWDVARKRIHKLDEKMAEKLGLIRFSRREEDVDFRLNIKKGIEIYLEFIERPRIAGGIADSTRKRYKRAINSFIDYVDANPIQYWEQIDSPFMASFIKSLSTQYKPSSIVTIATTVRTLHRYLITHKYLDDRCSFPFTIARPKESTKYCPGEEELRTILACLKGCDWIFDATTVLSHSGLRFGELAQLTRFDADLKESLIYVRDETFNSNSSRTTKSGRSRTVPMHPAVRVIIERRLLLDQDLLFVGPMGGKLRSDTYGRHLRKLALDPLSKKFPHPKFQTITAHSFRHFFASMCAANKVSEQTTMDWMGHRTSNMAKYYYRSNHKAAVKMIQQFEDFTEASPADDASNSKPDSETSNEDTEQNK
>NZ_CP042912.1|WP_148618759.1|2486196_2487162_+|hypothetical-protein
MSVEDKTLAETHLERLAQVLLTAINVSPIGCDPALDFEQLGSEHLKSGWMSGAVHPLSNRQLLSVLMAYLPKETLAEVGLCMMHAGLEKDIDGEPRKLREIRNLINLDCAGLDSYPDHPFVSINPAASSRDIKDSMNQLLAEWKREQGLSEQRIPSKEKLETYLQVWDDREGWFKGEYIRAREMTFSEIANRNDRSIKTVHNQYKSGFQLITGHEYSVDNWSELFGPLKVSEIFGDFGRATRLRPLIQKTRRAIPESVISSGQLPGFISRNSCTEEIPAEGLFRQIKQLIAAEKSDQEIAEELDLQHPEYLPLLRRRFDEI
>NZ_CP042912.1|WP_075082195.1|2483108_2485610_+|heavy-metal-translocating-P-type-ATPase
MNKTKIDIELALPDVTDLRDQCIARLNGMLESRIGIDKAHVREHDGDVDKRICIHFDPNRISIGEIRQFAIQAGTELGNRYGHLLLKSAAMDARKARRFNDQLSQIKGVLDSGVSANGIIRIEFAKDMTTASSVLDGVKQLGIRVDKQLVPLGEPPKTDREHTDHDHDHDDAHDHKKSGGAHDHKHGGIFGERSELIFAIICGVLLLTGWLISFSSSINTWISWAFYAGAYFFGGYYIVREAIEKILLRRFEIDFLMIVAAIGAAILGAWAEGALLLFLFAIGHALENYAMGRARQAIEALANLAPETAVVRRNESTQEIPVEELVRGDIVVVKTNERIAADGFVVKGQSSVDQAAITGESVPVDKQPVVDPVEAAKNPSALAPENRVFAGTINQSGSLEIHVTQLASESTLARVVTMVSEAETQQSPTQQFTDKFEKFFVPAVVALAVLLMFAFLMIDEPFSASFYRAMAVLVAASPCALAIATPSAVLSGVARAARGGVLIKGGGPLENLGRLTAIAFDKTGTLTEGKPRITDVVPYGDVFADDFLKTAIAVEKLSDHPLAAAVVRDGLEKLTGTSISEATDLQSITGRGIKATVDGQPVFIGKDDLFAEVDGPALPDDLRTTVENLESQGRTTMIVRRGEQYLGIIGLMDTPREAAKTMIANLRELGIERMIMISGDNQQVANAVAKEVGIDDAWGDLMPDDKVDSIKKLRSEGDVAMVGDGVNDAPAMANATVGIAMGAAGSDVALETADVALMADELSHLPFAVGLSRQTSRIIRQNLWYSLGMVAILVPATILGLNIGFAVILHEGSTLVVVINALRLLVYKNSVGN
>NZ_CP042912.1|WP_148618758.1|2481954_2482839_+|IS3-family-transposase
MKYAWIKQHRDQYCITLMCEIFGVSKSGYYDSIDRPESKRAVRSRAIRESVKQVYEESGQIYGSYKIAEELANDAQLETACRNTVATAMREMGLKSCVSRQFKPTTTKSDPDKKPAENLLSQEFDAEAPNRKWVADITYLPTAGGWVYLAVVLDLFSRKVVGWQMSDRLTTQIVTEALRKAIESRRPESGTLLHHSDRGCQYTSDAFQGILRTLNIQCSMSRTGCCYDNAVMERFFWSLKHEWTKHRRYGNLEEARMSVFKYIEAFYNSKRIHQTLGYQTPEEFERNYRAALAA
>NZ_CP042912.1|WP_148618757.1|2481652_2481958_+|transposase
MSSNGKRTRRTFSEEFKRDAVNLIVSEGYSFRAAAEAVNVNENSLRSWHRKYAPEPEPCGPEASLQQVLEENKRLRKQLKRAELEREILKKATAYFAKESQ
>NZ_CP042912.1|WP_075082827.1|2480222_2481077_+|hypothetical-protein
MKTSFVAILLLSACVVFATSNANAQQQTTQQQQQTTQQQQQTTQQQQQTTQQLQQTNQQNSAQAANAATQPQVVKKVGFRMANWRTIHGDGTKATTDLVTTLQKIGCEVKQDNHGNHTDISFRCPSWKTVSVQNDDQSNQWHQWLVDNEFETVVLNPPAATKLPTVKIRMAAWKTIHARSAQQAQALKETYELIGCEAVVDSHGDHIDLKFRCPNWTTVALVNSQAAHVWQDWLNKSGFETQHDHSADGHDAHAGHNHGATGHAGHDHSHDDHSGHNHEGHDHK
>NZ_CP042912.1|WP_075082204.1|2493491_2494313_+|phosphotransferase
MSTSNFITLGEAAVRFPDFDLPSGLNDQTRVFVKSSHNDVFGQEAAGLESLRRTDSIRIAEVIYVSQREPFVLILKAIESTPPSADFFERFARKLAQMHRCSAEQFGFEHDNFLGATAQPNSWTSDWVEFWAVHRLGFQLRLAADNGLGGSELQRLGQALIHRLDEQIGGSNERPALIHGDLWSGNWLCDEHGEPALIDPAVYFANREAEFGMTTLFGGLPPRFYGAYREAWPLEDGWEDRVAVYRLYHLLNHLNLFGSSYLGECLESLRRFG
>NZ_CP042912.1|WP_075082205.1|2494618_2495392_+|isoprenyl-transferase
MPSTETENEFWSGIPEEKRPRHIAMIMDGNGRWAQERSQPRVKGHQQGAETVRVITEECARLGIEQLTLYCLSSENWKRPELELEFLMHLLTEYLVNERETLNKNNIRLQIIGRRDRIRPEVQAEMDRSIELTSQNTGPTLCLAINYGGRAEIVDAIRSISQRVKDEGLEVDAIDEQMVSEHLYTAGMSDPDLMIRTAGEMRISNYLLWQLSYAELWVTQKYWPEFDTDDLRTAIRDYAKRKRRFGGLNRNEQEPSC
>NZ_CP042912.1|WP_075082206.1|2495385_2496309_+|phosphatidate-cytidylyltransferase
MLGRRLASAAVLITTMILLLWADFSLGQPDSLGRSGVLLAILCVIISTAAADEFHRLWKGTGCHPSWLMMVGAAVMVSMSNLPVFWKDYPADCPIGKLGWTLSGVGAAVLIAFAYEMLTFDPESASAESNRGAVATRIGKSSLAFVYIAMLFGFVLSHRQIQDNNHLGVAAIVLIIATTKLSDSFAYFVGKAIGSRKVAPKLSPNKTVEGAFGAIVGGIVGAAIVVFLVSPFIIEVTIPKPWWWFLVYGVAVTLAGMVGDLAESLLKRDAQIKDSSSWLPGLGGVLDVIDSLVFAAPVSFVIWLIGN
>NZ_CP042912.1|WP_075082207.1|2496386_2498990_-|S8-family-serine-peptidase
MFRLTKSSQRRRPSRNANSPLNFAKLELKNPLAANFLDFSVLDASQDLTTDTVFESGALSIDYDVDVTSGSLVAVEIFAQNGGSIQKLGEFFTANESDSLISLEGFSSLSGTQQIFGVASTSDGQHATSSSIDIDVLQTTTEVGSFLGTTFNYSGTSDSAYVLEALGGTDTLALNFSSTLVTDFNGESLASYDRDAFVTSQAFYQGSVYDYMTTSDGRELYFQGVERLEFSNGSTVLLQTQPNDPQFVEQWDIATGDVGDAWRFTRGSDEVLIVSLDTGVPFTSGTPTTSDFDLSNMDFISPDNESVSNGDHGHRATSVMVAEPNNNFGLAGINWNSPTLMIDVYPSTHPDIGSNILTDAILESIAFLDSTAASRIVFQGGIQGEYWLSRLDQSLLTTYQDSTLYSVAAGNGSVDLEDATSNPVYSAGVARLAGTYDNVMAIGALEPVFEYVDGYKNASQLPLAGYSNYGENLTFSGPSRTRSIGPTGSVANFGGTSNSNPVVAAYSSLVWSVDPDLTSVEVRDILIETAMDLGTAGRDTQFGWGTPDAGSAVRRAWAMSQNSELALLGANVFGDGADTDLGYLLASNSQLGENIDTSGGPVEVGLLSTTNTNLSSLSYTLVAGAGDADNGSFEITGDSLSIKQGTMVDFESQSSYSIRVEASDGSVTHEQDLLISVIDDAESTTFTIADGEIQRSMLNNFVVAFDGIVTLGSTPFEVVKRGTDGGVVDVSAGIDNSSGSSVVTLTFSGMFAETSGSLVDGNYQLTVFGDQIQTASGQSFDADGNGVAGGDLVFGDSKSAGVYRLYGDSNGDRNVNVVDLLALRQSWLGEFGDDIYNPAFDYNRDDLVSVFDLLPFRQNYNEQLDFA
>NZ_CP042912.1|WP_084416790.1|2499170_2502218_-|efflux-RND-transporter-permease-subunit
MTRNSIAANLLMVLLLGGGIWSTFTIQKEVFPNFLLDSVEISVGYPGAAPEEVEQGILRPIEQALREVEGIREITSYAREGRAYVEAQIVAGEPRMKVYQDIDQAVNRIRTFPDQIEQPEVRLASEQKEVMALNLFGNIEIKALRKLGEQLRDQLQAHEDITQIEFWRAPPYVTHVEIPRQTLREYGLTLSDIANVIRRSSQDVAAGSVQSNSGEILLRVKARKQWADEFAGIEIVSGRGGQVVKLGDIAEVRDGFEEAGFHSQFNQTPSVELEIYRVGSQSPQDVAAAVEETMANFESQLPPGVAWRIDLNNAKEFESRLWLVIKNAMMAVVIVFSILALFLEIRLAFWVMMGMVVSFIGGILLLPMFGVSINMISLFGFLVVLGIVVDDAVVVGENVYEKRQTESSLETAAIVGTREVSGPVTFSILTNIVAFIPLMFIPGETGKFWSPLPWVVIIVLALSLIESLFILPAHLAHIRRKKGESESAGQQRWFGRMFSRLVDLLYQPLLKFCLKFRYITASLALASLLILGGYALSSHMGMVLMPEVSANEIEAGVRMPTGTTPDQAAAIANAVTTASLEMFDKHDLYRCAEGIKTNVRGEGFIDVEIVMKPPNERDMTSKEVIELWRQEIGDLPGVSQISFRAERGPGGHRRDISVDLSHSDIDVLEKATAALVERVKAYSNTRDVNDNYDRGKTQFDFKLRPEGRALGLTDENLGDQLRGAFFGSLALRLLRGMNEIEVRVKLPEEQRKNLHNLEDLIIQTPDGSEVPLMDVAEVEEAQAFNRINRRNGRRVISVSMDAEPPGAVNQVIAALQANELPRLRDDFPGITWDFSGSNAEMRDATSTLWSHFALALAVIYSLLAIAFRRYVQPLIVIVAIPFGMVGALIGHIILGYDISLVSVMGVIALSGVVINDSLIMIDYANRMRGEHSALESISLAGVRRFRPILLTTLTTFGGLMPLIFEESLQAQYIIPMAISLGFGILFSTAIILVLVPCLYMIQEDLQSLWKRVTGA
>NZ_CP042912.1|WP_084416772.1|2502368_2503574_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNESSDQRTRSGVRWLRIVFNAIVCAAILSGAAYAIVVINRTEPVAEKANSTRKSSALVDTITVNYGTYSPAVSVLGTVRPAQQISLRPRVSGQVVELADAFVPGGMIGKGDLLLRIDPADFENALSISKSELEQAKASMEIEKARQRLAEKELKLLEDSIDGTNRGLVLREPQIASIKAEVSAAEAAVERAQLDLERATIYAPFDSQVLDRSVNVGSQVSPGNDLGQLVGLEQYWVMASVPIRSLRWVELPDEKEIGGSKVTLRNPDAWGPDITREGRVSRLIGTLDEQTRLARVMIIVEDPLGRDNGAPPLILDSLLTTEIQGKAVERVVRLDREYVRDEDTVWAMRDGKLEIQPVTVEYRDSEFAYISDGLVDGDEVVISTLATPAEGIGLKKRGASK
>NZ_CP042912.1|WP_087149594.1|2503566_2505249_-|TolC-family-protein
MNLRVAQWLLVMLLVGGCADRNTRGPIPTLHTSPEFTESGSDIAPNRWWTAFEDPQLDLQINDALTNNYSLASATYRVQAARAVTQREASDFWPDIDGILGFGSDMGPGENGETYNFGLDASYPVDLWGEIESRVEAQRLRAIAECWDYHTGALALTAEITSVWFSLIEAHAQAKLLEEQIKTNRTGLELQEERFRLGLIRSADVLRQRQLLESTLEQEVVVELQVEVLEHQLAVLLGDMPQLASYESGTLFPEMPPLPTTGFPSELLLRRPDIQRNYYALMAADKDLASAISAQYPRLNLGGSIQNIAENPEELFKDWFVSLGGQLIAPLFDGGQRRAEVERNRAVKYQLFNDYAQSVLVAFREVEDALAQEKYQLKQIEHLEEQVKLAGQASIQLREQYLIGDVEYLDVLSAITGQQSLQRRLLSAQLDLRLIRVSLYLALAGSIEATNVEGEDFAVDDFRIENAAVGNDQPIFDVDSRTVGVNEPINTANVDPNLDPPGREPFGSDRFSDLLPEESGVDESRFGQTRVNRSKTPVAPDANPQEIPLLERLRGTTNNE
>NZ_CP042912.1|WP_157665014.1|2505540_2506308_+|PEP-CTERM-sorting-domain-containing-protein
MKTKTNLVLLVAILFAACDSLAAHDGKRLDIVVINNQLYAQGYLSGTDPIDDGGGIVRPYLNVVHGHLSNVGSTIANSTLPGFDLDLDNAPQLLGHDLTLSLMGAGKWDEPPRQDGTGLAQDFGTPVLSDLSVGELLSISFRIESISTDNPGSITLGSDISEDLPDLDPTYEVNLQPDNVIYFLEWELSTSNPDILASETIYTIHSPPGVGPEERLHFQSLALERHFGIQAVPEPGSVCLIALAGASLLMVRRRS
>NZ_CP042912.1|WP_075082363.1|2506405_2507770_+|Gfo/Idh/MocA-family-oxidoreductase
MSSDATPNRSPNRRQFLAATASAAAITAAPMFIPRTSLGYGRTAPSDRIAIGAIGCGGKGRHNTSAFLADDRVQVIAACDVDANHLNQGADLIDAHYKNSDCARVEDLRELIARSDIDAVHVSTPDHWHSFASVRAMQAGKDVYCEKPLANSFGESKAIRDTAIRTGRILQCGSHERSNNNCRFAAELVRSGRIGKVHTVRIQMPCEQDHHMSARAFRKKAEPQEIPEGLNWDMWQGHTHPVAYWEKGCHFWWRFILNYGGGEMTDRGAHIIDIAQLGLNRDSSGPVSFEAKGIQVAESPYDAFWDYEFTNTYADGTKLIGTTEGPRGLKFEGEDGWIFVAIHGGALSASDPEVLPQSVRDGKPVAFDQIDDSLKVQLGRSAGHHKNFIDCIISRAEPMATAEIGHRTATICHLNNIAMKVGRPVRWDPGTEELIGDFEAGELLLPNMRDPWQV
>NZ_CP042912.1|WP_075082211.1|2507808_2508963_-|hypothetical-protein
MKTDKSNRANSTLKRYADIMEPTELEQQPSKAETDAPLVKPNPAAEAADALAKPMFCLSLVFLVLLAGLVVAWVDVLPDPTDANLVADSQGAISWIDEFWKHPAVVTGYVLLGALLLIWPLFLIEPLYVRSLAKGHAMPSKNRFGWSCILCPPLRLAKSIPAKEGKIWLPRMGWRAPGKALHKEMERMFSKPMLIIAMLILPVLLIEFRFQELLQSTMWLKLLLSISMGLIWCAFTYEFILMVSSTKKKLFYVKKNWIDLAIILLPLVSFLRSFRVVRAAKVARFAKLQQLTKMGRVYRMRGLLAKTIRAFLVLELVHRILRTSPEKRLQKLLAQVEDKQDELRELEKQVKSVRAEIELQQSSEDLENAVPEIQAAALPLRNSE

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Crispr_ID: NZ_CP042912_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_6

2789964-2790093

Orphan

Consensus_repeat	Method
TCCGTCGTTTAACGGCAAGCCGCAGGCGACTGCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042912_6

>merge|NZ_CP042912|6|2789964-2790093|CRISPRCasFinder
TCCGTCGTTTAACGGCAAGCCGCAGGCGACTGCGTTCTCACACCAACCAATCGTCTCAAACGCCGCGCCACTAGCCGCATCCCTTCCCATCCCCCTCCGTCGTTTAACGGCAAGCCGTAGGCGACTGCGT

>NZ_CP042912|6|3|2789964-2790093|CRISPRCasFinder
TCCGTCGTTTAACGGCAAGCCGCAGGCGACTGCGT	TCTCACACCAACCAATCGTCTCAAACGCCGCGCCACTAGCCGCATCCCTTCCCATCCCCC
TCCGTCGTTTAACGGCAAGCCGTAGGCGACTGCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_157664982.1\|2795426_2796263_+\|NAD-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|349379
NZ_CP042912.1\|WP_084416669.1\|2790942_2792454_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP042912.1\|WP_075081546.1\|2786445_2787702_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766
NZ_CP042912.1\|WP_075081615.1\|2785936_2786311_-\|YraN-family-protein	unknown	unknown	gnl\|CDD\|237119
NZ_CP042912.1\|WP_075081550.1\|2781004_2781493_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP042912.1\|WP_084416668.1\|2800085_2801000_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197317
NZ_CP042912.1\|WP_148618795.1\|2778310_2780038_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223080
NZ_CP042912.1\|WP_084416670.1\|2784740_2785220_+\|TM2-domain-containing-protein	unknown	unknown	gnl\|CDD\|222840
NZ_CP042912.1\|WP_148618796.1\|2798161_2799892_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP042912.1\|WP_075081614.1\|2793375_2794242_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200589
NZ_CP042912.1\|WP_075081542.1\|2792829_2793351_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081537.1\|2801242_2801857_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081547.1\|2785537_2785861_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP042912.1\|WP_075081548.1\|2783209_2784445_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP042912.1\|WP_075081551.1\|2780042_2780930_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176524
NZ_CP042912.1\|WP_075081539.1\|2797350_2797542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081553.1\|2777187_2778129_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081545.1\|2787946_2789938_+\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273429
NZ_CP042912.1\|WP_075081540.1\|2796373_2797312_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|377306
NZ_CP042912.1\|WP_075081544.1\|2790153_2790693_-\|DsrE-family-protein	unknown	unknown	gnl\|CDD\|376874

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075081546.1\|2786445_2787702_-\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	3.45755e-09
NZ_CP042912.1\|WP_075081615.1\|2785936_2786311_-\|YraN-family-protein	gnl\|CDD\|237119	PRK12497, PRK12497, YraN family protein.	1.48578e-38
NZ_CP042912.1\|WP_084416669.1\|2790942_2792454_+\|hypothetical-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	1.55999e-15
NZ_CP042912.1\|WP_084416668.1\|2800085_2801000_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197317	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds. Their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.18308e-105
NZ_CP042912.1\|WP_075081544.1\|2790153_2790693_-\|DsrE-family-protein	gnl\|CDD\|376874	pfam02635, DrsE, DsrE/DsrF-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. This family also includes DsrF.	7.03637e-11
NZ_CP042912.1\|WP_148618795.1\|2778310_2780038_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223080	COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].	1.82877e-40
NZ_CP042912.1\|WP_084416670.1\|2784740_2785220_+\|TM2-domain-containing-protein	gnl\|CDD\|222840	PHA01886, PHA01886, TM2 domain-containing protein.	6.1657e-11
NZ_CP042912.1\|WP_148618796.1\|2798161_2799892_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	8.24671e-08
NZ_CP042912.1\|WP_075081614.1\|2793375_2794242_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200589	cd10967, CE4_GLA_like_6s, Putative catalytic NodB homology domain of gellan lyase and similar proteins. This family is represented by the extracellular polysaccharide-degrading enzyme, gellan lyase (gellanase, EC 4.2.2.-), from Bacillus sp. The enzyme acts on gellan exolytically and releases a tetrasaccharide of glucuronyl-glucosyl-rhamnosyl-glucose with unsaturated glucuronic acid at the nonreducing terminus. The family also includes many uncharacterized prokaryotic polysaccharide deacetylases, which show high sequence similarity to Bacillus sp. gellan lyase. Although their biological functions remain unknown, all members of the family contain a conserved domain with a 6-stranded beta/alpha barrel, which is similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, belonging to the larger carbohydrate esterase 4 (CE4) superfamily.	1.76717e-38
NZ_CP042912.1\|WP_157664982.1\|2795426_2796263_+\|NAD-dependent-DNA-ligase	gnl\|CDD\|349379	cd17748, BRCT_DNA_ligase_like, BRCT domain of bacterial NAD-dependent DNA ligase (LigA) and similar proteins. LigA, also called NAD(+)-dependent polydeoxyribonucleotide synthase, catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. The Trp-X-X-X-Cys/Ser signature motif of the BRCT family is not conserved in this family.	2.47756e-17
NZ_CP042912.1\|WP_075081547.1\|2785537_2785861_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	9.8058e-32
NZ_CP042912.1\|WP_075081548.1\|2783209_2784445_+\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	5.02469e-07
NZ_CP042912.1\|WP_075081551.1\|2780042_2780930_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176524	cd08582, GDPD_like_2, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	2.1272e-85
NZ_CP042912.1\|WP_075081545.1\|2787946_2789938_+\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP042912.1\|WP_075081540.1\|2796373_2797312_+\|ATP-binding-protein	gnl\|CDD\|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	2.92308e-12
NZ_CP042912.1\|WP_075081550.1\|2781004_2781493_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.000208693

>NZ_CP042912.1|WP_075081545.1|2787946_2789938_+|UvrD-helicase-domain-containing-protein
MSGLNAAQQEAVDTLSGPLLVLAGAGTGKTRVITFRIAKLIKHGVPRHKILGVTFTNKAANEMKERLTGLIGGSIGTKNKYKKKAEQSENEPTISTFHSLCVRILRRRIEKLGYPLKFAIYNRGDQESLARQILREIRVPDKALKPNQLLFHISNWKCKSLNAKQAMMQSESDAQHLAAVGFERYQKQLKLRGAVDFDDLLLLTEQLFREHPDVRQEEADRFDHLLVDEYQDTNTSQYRIVKALAGEHRNLCVVGDDDQSIYAWRGAEVEHILAFAKDWPDAKVVRLEENYRSTEAIIKYANTLIRFNSTRHDKVLVAARPGGELPIINQWEDETQEAEEVVRSISNRLNLHGREPRDFAILFRTNEQPRPFETALREAKLPYILVGGMSFFDRKEVKDVLAYLRLLDEPDEVSILRIINTPPRGIGKKSIENLLDRTVREKVPMWDMVCGYAERPKVTARVKQGLDQLAAAVNEVRSVAGNHSLVDQARMLIDKIDYKSEIDRIYSEPDDRESRWSVVEQVVNALADYEQSRKKPTMTNFLDRLLLGDQDANSDKEKQLKKNAIALMTMHAAKGLEFPEVYIVGLEEGILPHQRSLEDDEAGVPEERRLCYVGVTRAEERLTMSMSLTRKKWGKARETIPSRFLYELTDQADNPNYAKCSKR
>NZ_CP042912.1|WP_075081546.1|2786445_2787702_-|hypothetical-protein
MSKTKPNSKKKTGSQKVKPSDVNEIPVDGEAEEELSAGEKFLMASKPYWAHILLGVLCVIFASVLYTSYTSMSTESASQPWRDLNNAMTQAGLTSDVSSLKEMATNNEGTAAGHWALLMAGDSEVNRGIDMLGRDRAGGFKLIKRGVESLQTVVDAPASEKSPMVQRRSLFRLANGKEALGEFEAAKGLYQTLLDAAPDSPFADVSLRGIERCSNTELAAVYDKFRNWEESTGVAPGPLVPDKPTFNMDEIKLPEGQSDTVSGGDFGGEAKKEEAESEDPASEGDAEDKSTDEPAAEMPSETEPAKETEPAKETEPAKDTEPAKETEKPAETPAESETPTESETPAEPGSEPPVKTETPAETPTETETPAAEPKADPPAETEVPTTEPDVPTETPATEVPETPAEGEPPVEPSTGDDG
>NZ_CP042912.1|WP_075081615.1|2785936_2786311_-|YraN-family-protein
MPLGRRGERAAERFLLKQGYWIVERSFGEKVGEIDLIVSDGWTVVFVEVKTRTSDVAGDPAEAVDLKKQRHITQTARLFATKNRLENTSLRFDVVGILWPDLSRPPHIYHYVDAFEATGDFQMF
>NZ_CP042912.1|WP_075081547.1|2785537_2785861_-|metal-sulfur-cluster-assembly-factor
MALHEDHVREALKQVIDPELFINIVDLGLIYEVDVLPVEGEEDQNDVKIKMTMTSPMCPAGPQLVADTKKYASEVEQVREVEVEVVMDPPWTQDMMTDDARDQLGIF
>NZ_CP042912.1|WP_084416670.1|2784740_2785220_+|TM2-domain-containing-protein
MKGQAVPPTKQYVKYVPVGYVESHSMAVGYLFWLIGFTGAHRFYFGKPVSGAIWFFTFGLLGVGWLIDLFLIPSMNREAAEQFFPGRTDYNIAWILLVFFGLFGVHRFYEGKIFTGLLFLLTGGLMGVGYVYDVLTMNDQISDRNRSTVREFSHYQMAW
>NZ_CP042912.1|WP_075081548.1|2783209_2784445_+|PEP-CTERM-sorting-domain-containing-protein
MTKHFQLGAKLFASLAAVSMLAIPASAQTVEEIFFDPAVAAGDIDEFAISPDGTQIVMVADLGDGDQTYVASLNSGVMNTATLVSPAGVGDNDGGVAWTPDGLHVTARYAAGGATNEIFLVPADGSQTAQQLTFTGNNAFDPQISADGNSFFYSDGGSLFVTPIAGASATSSIQLNAGDISEIDTGSYAQVGSNIIFAGFSAPIPGAGNGDPETAFYLTAADGSTAASPTLISIDNFETNNPGGSDIDFVDVTSDGQTIVFRGDLTTDDQDELYSLSINGGDAVSLIAGTLRDDFDLNYFTISPDGSTIAFIGDYLTNGVAEAFVVPVTGGDPTLVSDSSFFDQENGFDVDFGGVDTLQFSPDGNSLYYLSDSGDDGRFRLFRASINAVPEPTALPLILAAASTILFRRRK
>NZ_CP042912.1|WP_075081550.1|2781004_2781493_-|carboxypeptidase-regulatory-like-domain-containing-protein
MKFSNRPIAMGICLIAITMVSGCIGSNEANYSQLGLIKVTGNIKLDGEPLPDTVVFFEQTDGTMSYATTDANGDYRMKFNSEVDGVLPGEVVVKISTLASTGELKTDEGDAEVDPDLPKPKEKKELVPVEYHKESKLNLTIPTGNNVFNFDLNSDGSTTGPI
>NZ_CP042912.1|WP_075081551.1|2780042_2780930_-|glycerophosphodiester-phosphodiesterase
MKLSRLPLPLVFLLISILPGLAPAQLFVAHRGASHDAPENTLAAFRLAWKQGADAIEGDFHLTSDKQIVCIHDKDTERVCPTKPVLKVAESDLATLQNLEVGSWKGRQFSSEKIPTLSDVLATVPEGKKIFVEIKCGPEILPVLEKELAASNLEPEQIVIICFKSAVIQQVRESMPQYKANWLTSYKLKGSEDDPSWTPTQDEVLATLARTQATGLGSQGHEDVVTEEFVAAMVDAGFEFHAWTIDDPNQAVQLKSFGTSSLTTNRPEFLRQQLADPKLAAPKPTTESPRELLVK
>NZ_CP042912.1|WP_148618795.1|2778310_2780038_+|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MRSRIYIVRTTVILSNMLSDSINLKLLEHHARLTAEARYRLLYHRFDPHLQQPIYGERVLPKFSKRASGCQIWDILGSVYLDWTGSSDSNLLGHRHPAVVDAIKQWAIDEPAHELDEPAACDGPLTDPREVSLAKKFADVFNHGDELLVGFTRGRSEALYCATEMARTLTGRPMIAVHEVHSNRPLFAEDQRFRFTRSHFEETNVKTIPLDDVKAIEWLLKTNPDQLAAVVINPPTFQLPPTGYYKELHSLLQKHGTLLILDESETAFRLDIGGAQQHFSIAPDITVTGEKLGGAFAFSAVLGRKELLGRAWRSTMRTLDRPGGLTLDVVEAAFDVVVGRCLPSELRHVGSQLRDGFNDFAQEQGFPCQLVGDPTRLALQFDAQEFLTPEQLRAAFCMFALEEGLITHGEFWPNAAHNGDALFDTMRMLERTTESMTRWMREIVKPEEAIGEPFSKFELRGRIDALNMIRKTMVLTGWVLIDGEPVELSAVDEDGTRVAAEQVQRKDLAAGMPNSPQANNAGFKLSVEVQSIKKPSRFLIEAHRDGKLIYRTLLVHDPAEQSSAPYPFRDGYIFT
>NZ_CP042912.1|WP_075081553.1|2777187_2778129_-|hypothetical-protein
MSSNRNIVCAVVLCVVGMSFTGCRNRCQPNYYPYQQQPYANQYGYNTAPNYGQQYGAAGGRSQVIPPPGTGTLNIPSIARNNPFGVNQNRGLLNTGGNAPTPANGASQFNQQNGWQSVGGNTANPASNPNPNNNQSNATQPTSGTTTLGSNSTANPAATGQESAAPASARSVLVQNTQAPANQGYGDSYVRSPDYSTTAVNETYDRTRLPATDASAVRAPSQYYARASGVQVAQLPGQGMSGYQQPYYSGTFSVPSGQYNAASGMVQTGNATNAVFAANTNAVVQGQSTASYDPYNNTRSADWRNRDTSGTFQ
>NZ_CP042912.1|WP_075081544.1|2790153_2790693_-|DsrE-family-protein
MFLKLSVCFLVLFAAVAIPQQKDVFRAGSVIPEFGKIASVDSDVKLSADTELKICFDVAEKSGAKINRTFDSAARFINVNVDGGADPKKVSVAIVVHGTAAIDVSKNEFYGNENDGIENPNAAIIAALQKNRTTIYLCGQTAAWRGIGKEDLLPGVKLAPSAMTAHALLQHDGYALCPF
>NZ_CP042912.1|WP_084416669.1|2790942_2792454_+|hypothetical-protein
MTTIGNPRTVWQYTPALLLLVLVSFCSTLTAAADEKPMLYFFTSKGCAPCIQVKHVIKQLGTEGYPVTTVDVGERPDWADAFRVTHTPTLALVRSNEVLAWQPRPMRAEELRGWFRTIGYTPTRPAGTLKQSTRTASDDSPRTRPVQTKVSLASNKSVAKSGAAFSTPTMHKGTDRPQNRFEARALNATVRLQVKDETGTSYATGTVIHTHQGESLVMTCGHVFRESGGSGEITAEFGFANGATVKVPGKLLDYDAKANDIALVAIQNGNHSLNAVEVAIADLKVDRGDRVFSVGCDHGDDPTIRNTAIKNLARYDGSMKYDIYGRPVNGRSGGGLFNAQGQLIGVCNAAAVEVDEGIYSALETVHWQITKTNLEHLFQSTPASPLRDRRMIASNAAANAADSRNLVPIRRQRETPRSLAPRTAPRTAPRVAAASSPVQNVSFQSPVRSSDQEVIITVRSKSNPQDSRTITISDPTPKLLDYLGGMEGDESRSLKMAQYREWR
>NZ_CP042912.1|WP_075081542.1|2792829_2793351_+|hypothetical-protein
MQQLFEQFAADVAAQPQWLQIWGNILGPVTLLSMILFLFRRNLIPVALLTVFVLPSMLLLYHNFGYSRILGLAHIVFWTPADVYLLKIRTTWRVRETWLGKWIIVALAVMLISLAFDYVDLARWLLGDRGRVHLSMMRTELAGLSQRHERGQITIAEDGTASRMALAAPKHGS
>NZ_CP042912.1|WP_075081614.1|2793375_2794242_-|polysaccharide-deacetylase-family-protein
MPVTLQPKWFLLFIMLISFPAVATAQDGYWPEGKTFCVTLTYDDGLPSHLEHALPQLKAAAFKGTFFWLGEEVHRWSQDDLDQVREAGHELAGHTIFHPCPRKFDWVKAGNASEDYNDERMAKELDKNLANQINNGVEQGTATFAYPCGCTYIDEDKHSYVPLVKERFFAARSTRNGIEVPGNGNIDLFDVKTIAGDQHDLAFQLAQVDAAKEANGWLVFMFHGVGGDHLAISADDHREILRALQEDDSVWVATFQEAAAWVKSKQENANAKQDNAEPGTPDSATKVK
>NZ_CP042912.1|WP_157664982.1|2795426_2796263_+|NAD-dependent-DNA-ligase
MHTLEGLVTGIAIDSKINDKELAALTGWIASHREHANRHPFNEVIGRLNEILADGILDDDEKADILWLCNKFSTENSFFSQVSSDMQRLQGILGGIAADGKITVDELENLNEWLYEHEHLKTCWPYDELEALIIAVLEDGVIDEGEHKALLAFFREFTDRPGHKAVKLPAKSEDLLLGGVCAVCPEIQFLKQKFCFTGTSTRMTRDELAQQVANFGGMFSRGLTQSVNYLIVGADGNPCWAYACYGRKVEQAVSFRKKGLPIVIVHENDYWDAVADYT
>NZ_CP042912.1|WP_075081540.1|2796373_2797312_+|ATP-binding-protein
MPTRYKTITKRARMLLNREEGLDVDFKKNSKLDQDDLVAFANASDGGAILLGVAEYTGSDGRQETEIAGCQLNDNIRLEITNRANSCSPPVDLEVIEENGSRKPFIRIEIPSGNSKPYCTSGGTYKIRGDGHNRALLPNEVLQILLANETETFVTRFREATDHVHEQLQQLTANLSQQFDSVFNDVQSIRENLEEATCQIFSETSDAASNAEDSTSGIYENQRHILENKEAIEFIRRDVEIASRKIDSLLVGQHIQDLSVPLLEKDLSRELLGTSVVTKKQQKRFIEWAQDAYPTVPPEKIELIVAQYATLQ
>NZ_CP042912.1|WP_075081539.1|2797350_2797542_+|hypothetical-protein
MIAGSGMMIARLDCNVRTGTCDRRLVKPVILRALGALAATMAEATIAVFQVSNAMFGAANADY
>NZ_CP042912.1|WP_148618796.1|2798161_2799892_-|PQQ-binding-like-beta-propeller-repeat-protein
MTDQEPSNPDQPPILPTKTSKAYFPWVVVFVVGALLIALNFFDDLLAEAVNLDPGVRNLAMFLLPLVALTLVGWWYLIRRARSLNWKSLLAVFAVLAPVVFFVLYQPVFGGNANLERFEPRFWSDGKEIAIKPAETKTSRLATTTEYDFPQFLGPDRDGTIRNVKLASWKESPPELIWKQPVGDAWSGFAVVNGYAITQEQRDDQECVVCYEVETGNTVWNYSVTRRHEDFSSFGRVGPRATPTIHDGKVYAVSGTGVLDCLNGEDGSLIWSFDVPKKMGIEQVSNSNSRGLEFTQENSTLTWGRSQSPLIIDDLLILPGGGIAQPDANAEEPDLRVEAPGATLIAINRETGEEVWRGGDRSIAYGSPILATVAGVSQILLIAEDHCVSHDPKTGKELWAWSWPGGSNGAANCSQVTVIDDNTVMISKGYSTGAQVISLENEDGKLIPIPEARDPRALKTKFSNPAIHDGYAYAISDRFLECADAKTLKKQWRHRGFGTGQLLLVGDKLLVHAETGKLSLVTATPESYEELGSVETVDGTCWNTIALFKDLVLVRSEKEAACFRLPLDSQTGPLTQ
>NZ_CP042912.1|WP_084416668.1|2800085_2801000_+|endonuclease/exonuclease/phosphatase-family-protein
MTSIASCKQVHGRVVILLAFVFSSIVLIGTATAQEPLRVLSFNLRYGLANDGDNSWDNRKDHVVTTIENYQPDVVGTQETLEFQAAHIGDKLTEFTYAGRSRQKDGKGEHCGIFFRTSRFDKLIEGHFWLSENPDQPGSKSWDSSLPRMATWLKLWDRTNQHAFYLINTHFDHRGANARAESAKLIRRFVESLPSGSNVIITGDFNAGVNSGPYTALFAEDATASPATPSPVVDTFAAMNPDAKDNVGTFNAFKGTDSGARIDWIAASRKIEILNASIDRTAFDGKFPSDHFPVTAELRLPKLE
>NZ_CP042912.1|WP_075081537.1|2801242_2801857_-|hypothetical-protein
MTLQSIDIPEDIKQLAHDDAATNLIALGHERIEAFMQDNDSVTENFVRCDFHLLDQALTWIEQNHLLTGRRFCELGSGFGVAAMLASLHGLESVGIEVESYLVDQASDLADELDLPTAFYCGSFVPRGVLDIEQLGSEVEHVETHEDDVYEEIGLAMDDFDLFFAFPWPGEEHFFEAVFEAGAAVNSLLLTFRGRDGMGLLRKV

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Crispr_ID: NZ_CP042912_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_7

2877932-2878291

Orphan

Consensus_repeat	Method
CCTTACACTGAGANNNNNACTCAG	CRT

8 spacers

The CRISPR arrays of NZ_CP042912_7

>merge|NZ_CP042912|7|2877932-2878291|CRT
CCTTACACTGAGCCTGTTTCTCAGAACTACACAGTCATGGTTCCTTACACTGAGAACGTTACTCAGAACTACACGGTTCAGGTTCCTTACACTGAGAACACTACTCAGGAGTACCAGGTTACTGTTCCTTACACTGAGACAACTACTCAGACTTACAACGTGCAAGTTCCTTACACTGAGAACACAACTCAGGAGTACCAGGTTTCAGTTCCTTACACTGAAATGACGACTCAGGACTACACGGTTACAGTTCCTTATACTGAGAACGTTACTCAGTCGTACCAGGTTTCAGTTCCTTACACTGAAATGACGACTCAGGAATACGCAGTTCAGGTTCCTTACACAGAGAACACAACTCAG

>NZ_CP042912|7|2|2877932-2878291|CRT
CCTTACACTGAGCCTGTTTCTCAG	AACTACACAGTCATGGTT
CCTTACACTGAGAACGTTACTCAG	AACTACACGGTTCAGGTT
CCTTACACTGAGAACACTACTCAG	GAGTACCAGGTTACTGTT
CCTTACACTGAGACAACTACTCAG	ACTTACAACGTGCAAGTT
CCTTACACTGAGAACACAACTCAG	GAGTACCAGGTTTCAGTT
CCTTACACTGAAATGACGACTCAG	GACTACACGGTTACAGTT
CCTTATACTGAGAACGTTACTCAG	TCGTACCAGGTTTCAGTT
CCTTACACTGAAATGACGACTCAG	GAATACGCAGTTCAGGTT
CCTTACACAGAGAACACAACTCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075081496.1\|2865018_2866149_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|226040
NZ_CP042912.1\|WP_084416660.1\|2882126_2882987_+\|porin-family-protein	unknown	unknown	gnl\|CDD\|226163
NZ_CP042912.1\|WP_075081493.1\|2871925_2872846_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_148618802.1\|2873151_2875137_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081483.1\|2887300_2888245_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213236
NZ_CP042912.1\|WP_075081610.1\|2866185_2867298_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP042912.1\|WP_148618804.1\|2880412_2881804_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP042912.1\|WP_148618805.1\|2890472_2892110_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042912.1\|WP_084416835.1\|2893326_2894211_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042912.1\|WP_075081484.1\|2885963_2887304_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NZ_CP042912.1\|WP_075081495.1\|2869448_2870309_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081491.1\|2875232_2876243_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP042912.1\|WP_075081486.1\|2883071_2884559_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224706
NZ_CP042912.1\|WP_075081609.1\|2867968_2869273_+\|ammonium-transporter	unknown	unknown	gnl\|CDD\|274697
NZ_CP042912.1\|WP_075081494.1\|2870571_2871894_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340851
NZ_CP042912.1\|WP_087149579.1\|2888464_2890147_-\|sodium/solute-symporter	unknown	unknown	gnl\|CDD\|271363
NZ_CP042912.1\|WP_075081490.1\|2876287_2876812_-\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377164
NZ_CP042912.1\|WP_068267815.1\|2893024_2893330_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP042912.1\|WP_075081485.1\|2884677_2885445_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|131644
NZ_CP042912.1\|WP_075081497.1\|2864078_2864864_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075081496.1\|2865018_2866149_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|226040	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism].	6.16417e-52
NZ_CP042912.1\|WP_084416660.1\|2882126_2882987_+\|porin-family-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	4.0552e-09
NZ_CP042912.1\|WP_075081483.1\|2887300_2888245_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213236	cd03269, ABC_putative_ATPase, ATP-binding cassette domain of an uncharacterized transporter. This subgroup is related to the subfamily A transporters involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two integral membranes. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.35823e-102
NZ_CP042912.1\|WP_075081610.1\|2866185_2867298_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	9.50876e-120
NZ_CP042912.1\|WP_148618804.1\|2880412_2881804_-\|hypothetical-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	0.00214896
NZ_CP042912.1\|WP_084416835.1\|2893326_2894211_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.31945e-73
NZ_CP042912.1\|WP_075081484.1\|2885963_2887304_-\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	4.54957e-29
NZ_CP042912.1\|WP_148618805.1\|2890472_2892110_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.44598e-06
NZ_CP042912.1\|WP_075081491.1\|2875232_2876243_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP042912.1\|WP_075081486.1\|2883071_2884559_-\|hypothetical-protein	gnl\|CDD\|224706	COG1793, CDC9, ATP-dependent DNA ligase [DNA replication, recombination, and repair].	3.64936e-15
NZ_CP042912.1\|WP_075081609.1\|2867968_2869273_+\|ammonium-transporter	gnl\|CDD\|274697	TIGR03644, marine_trans_1, probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.	7.12701e-122
NZ_CP042912.1\|WP_075081494.1\|2870571_2871894_-\|glycosyltransferase	gnl\|CDD\|340851	cd03825, GT4_WcaC-like, putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.	1.83852e-100
NZ_CP042912.1\|WP_087149579.1\|2888464_2890147_-\|sodium/solute-symporter	gnl\|CDD\|271363	cd10329, SLC5sbd_SGLT1-like, Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain. This subfamily includes the solute-binding domain of SGLT proteins that cotransport Na+ with various solutes. Its members include: the human glucose (SGLT1, -2, -4, -5 ), chiro-inositol (SGLT5), and myo-inositol (SMIT) cotransporters. It also includes human SGLT3 which has been characterized as a glucose sensor and not a transporter. It belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP042912.1\|WP_075081490.1\|2876287_2876812_-\|PepSY-domain-containing-protein	gnl\|CDD\|377164	pfam03929, PepSY_TM, PepSY-associated TM region. The PepSY_TM family is so named because it is an alignment of up to five transmembranes helices found in bacterial species some of which carry a nested PepSY domain, pfam03413.	1.32994e-14
NZ_CP042912.1\|WP_068267815.1\|2893024_2893330_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.79379e-08
NZ_CP042912.1\|WP_075081485.1\|2884677_2885445_-\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|131644	TIGR02595, conserved_hypothetical_protein, PEP-CTERM protein-sorting domain. This model describes a 25-residue domain that includes a near-invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In nearly every case, this motif is found within nine residues, and usually within five residues, of the extreme C-terminus of the protein. Proteins with this motif typically have signal sequences at the N-terminus. This region appears many times per genome or not at all, and co-occurs in genomes with a proposed protein-sorting integral membrane protein we designate exosortase (see TIGR02602). PEP-CTERM proteins frequently are poorly conserved, Ser/Thr-rich proteins and may become extensively modified proteinaceous constituents of extracellular material in bacterial biofilms. [Cell envelope, Surface structures].	0.00127545

>NZ_CP042912.1|WP_075081490.1|2876287_2876812_-|PepSY-domain-containing-protein
MNRWSRRLHRWGGILIAIPLLLVIATGLILQFKKEFAWIQPKTLSGSPNQMTIGWPKVLESAMGDEDARINSWADVDRLDVRPAKGVIKVRAKNGWEVQLDSATGEILSSAYRRSDFIESLHDGSYFSDFVKLYVFSANGMILLGLWISGIYLWFLPIQAKRKKKRRLAKKAQP
>NZ_CP042912.1|WP_075081491.1|2875232_2876243_+|UDP-glucose-4-epimerase-GalE
MNILVVGGAGYIGSHMVRLLDSAGHKVWVLDNLSTGFMQAVTAGELIVGDMNDSELVKSVLGDNRIDIVMHFAACALVGESCANPAKYYQNNVVNTLLLLESMRATNVRKIVFSSTCATYGIPDKVPISEATPQQPVNPYGFTKLVIERALRDYSQAHNFGYAALRYFNAAGASPLGGIGEDHTPESHLIPIVLQVAMGQREQVTVFGNDWPTLDGSCVRDYIHVDDLADAHLRAMERLKPGTGIELNLGTGTGFSVRQIIETCREVTNVDIKSVDGDRRAGDPPELVADASKAESELGWVPQYTSPRSIIETAWEWHRNNPAGYGDTALAEGQVE
>NZ_CP042912.1|WP_148618802.1|2873151_2875137_+|hypothetical-protein
MARLYIIDQSLCKPGGHHFDYVNCVARAAHLDSHETIVATNRRFVSRRQTKNDAELPLHTIAKVVPSFRNSTYQKVSWLAGLRHLKRATSIEDLSVEEHASRLFSMQRFLRRRRTKLFRKQRRKVIAQFACDCSRFFGAAVPEKFERGDQIFFTTVSELELMGLAIYLASNPSSRLATWHLQFHFNLFDGRTPEFESQSAVQRKVRGCFLAALSRIPDHNLMFYCTSEELVEQYSRLNVADFWRLPYPVNQRFSPEGNRIETRTVDAAKIPAKAFATSSNAAGLTHDPENVDSFETSERATTSSVLPRITSHSGTARMVVPGELRREKGSAVHLQGVIDGLWDEYLSTGRLQVAVQRPNRKMLGRQKLELTLPEGSHGVTDAPVIDYLRHPLSEEQYCRFIRGADFGLLLHDSRAYYSRRAGVLGELLSCGKPVIVPAGCWLAHQLQEPQFRHVDRMMRQLPSGRKVELREMSFDSDNAPLSGGIVSFDRQRHPFRADCAKSPDENIVIVSFDWQHPQSRGVDARIHCTESTADGSQQTSTQVVGHRFSAGKCHVMFRVDFGGNKIGLEIENAFDDSTASIRNLSMDLFQADNPRQVPLGAIGMIYADRDSIQDCVAELVEHLDHYQFSAQDYSQRWWNAHDPKRTLDYLVGSGNANLSVA
>NZ_CP042912.1|WP_075081493.1|2871925_2872846_-|hypothetical-protein
MTQTRKHVVILPHFCEEEVDRYLRIATLLKSWPKPKVETDFLLAASPKRKPSQRLVEAYQSLGNAIPFQCPTQIFGYPEGPTAMFWDCMEYVEQAYQNNDGFSLWLESDMCPTQSDWIDRLSQMWYSGSQRPLMMGCYVPEVYKYRILKRPKRILEPHINGGACYAMNFASQMPTDAREGVFDMAVYQFAKARGLARECRAISFSTTDRVRRDLMDASKVLLHGFMQEKDEFIEDCIRPLDGAELQKAKWNALQEQIETTRRKLRVWFVRRGREAMLENMFLAKQRYEQDNPVEELAETTHSRKAA
>NZ_CP042912.1|WP_075081494.1|2870571_2871894_-|glycosyltransferase
MKVSHFNTFPYGGAATAARRLSRRLRKSGVRSTFYYSRSDRDDVVQIGNKSEAIEQTQIAAEPSTNGLSMFARRREKKRLREIWRLHNEHIATRPAGEETFSMARLPDESTLNWFQINSDIVHLHWISFFADYPSFFRSIPDHVPLVWTLHDQNAFTGGCHYAGGCEKYQKGCGSCPQVTNAHSRDVSVDSFQTKRRALSGRNVHVVAPSRWMLDLAKQSPVWPRTASFHHIRLGFNLKKFYPVDRIHARKQLGIRSDAFLIGFGADDVRSKRKGVGSLVSALDHVSTDQEVEGIVFGSGEVQSTGRVKKFHELGYVDSIDRQRLIYSAADVVVVPSTEDNQPQVGLEAMACGTPVVGFDTCGIPEMVQNGKTGLLAKAGDSQDLAKQISWIINNPLQRQQMGIEARKMMELNHDSEIQAAQYIQLYENATQFGRKLKAA
>NZ_CP042912.1|WP_075081495.1|2869448_2870309_-|hypothetical-protein
MRNNFSVLTPFVIALSLLQTSWANNNHFLPGDAFFPTELTKADVERIQKAKGNINFKYSKLGGYGGAFCGGAGYHKASMPVADDAFAKNLAKAYERIREFEDRELIEFEGEDGKIEYDEINGVKVLFYNSDFDFNKHALGLRYNENWLKEVVAFGHSRDHARLCCLLQSQEAVTTSWRDGDLVPAFKAKTPNADGKSLRETMGEPIVFDTKVKAIVIPASTSLDDLFERSAGSQLLVVDSSGVKEMRIENYKWQEGNIDIGGFGAGKDSKDGEKSKGGGRSNGGVF
>NZ_CP042912.1|WP_075081609.1|2867968_2869273_+|ammonium-transporter
MIAGMLVFIMHLGFATLESGLTRSKNTVNILFKNTAIVCLGLISYAVMGFLMMYPASFLEYSGWSEAEQANYLETTEDGFLKKNGYFAFDGFGMVMNGPTQAAVGDEATAEEIAGFNAASTEEGYGNPYTLFTDFFFQAMFAATCCTIVSGAVAGRIKLGTFLIFCLFFVSLSYPITGSWKWGYGWLDRAGFYDFAGSTLVHSVGGWGALVMAFLLGPRAGKYVNGKAMAIAPSNMPMATIGVFLLWFGWFGFNGGSVLSADPGLVSLTLCTTSMAAAAGGLAAALVSTVHGKKPDLSMTLNGILAGLVGITAGADQMSLLEAIIIGLIAGVLVYVAVIFIDGVLKIDDPVGAISVHLVCGIWGTLAVGIFGAMAGTEQLLIQVKGIVAIGLFTLLFCLVLGLILKFTLGLRVSEAEEQEGLDLGEHGIHAYSL
>NZ_CP042912.1|WP_075081610.1|2866185_2867298_+|A/G-specific-adenine-glycosylase
MINDSPILLTESTAAERTKFRRALLKWFDSHQRDLPWRKDRTPYRIWVSEIMLQQTQVATVIDYFKRFMKRFPTVSKLAAADQSEVLKLWEGLGYYRRARQLHTAASVVVERHRGNFPETFDEVLALPGIGRYTAGAILSISLDQQLPILEGNTIRLFARLMQMESDPRSSANQKLLWQFSESLLPKKRAGDFNQSLMEIGSEICTPRCPKCSECPIIKFCPTFRGGLQNQIPAPSVKMKYESIREAVVLVSKVTRGQTKFLVRLCGEGERWTGLWDFPRFELGNRRAEVWLPEQIKSLTGLDVSVGSSSLQMKHAVTRFRITLDVFSSEQVTGRLKSGAASELRWATNKELLEMPMSTTGRKIADRCCI
>NZ_CP042912.1|WP_075081496.1|2865018_2866149_+|prolyl-oligopeptidase-family-serine-peptidase
MRNFLTASVAVLFLFAVTLSVSQLHSQSLQEESKSQGRDNVDAKPRGGNWLRRQKLEPTGVEVQLEHQGRDRKYRIHVPDSVDAATPVPLVICLHGGGGNSDQGSVMGVTPLADEHNFIVVYPNAIDKHWNCGRDSELFREHNRTIDDVDFLMSIVAKVRKQYRVDEKRIFAVGVSNGGFMTQRLAMEHPETFSAVGIVIATMAESLEKDFKPTLPVSVVYMNGTSDPLVPYDGGALTVDLFPKLRKAMNRKLEDRGSCVSTDAAVEHWVKRNGIKAKPAVSTFEDVNEEDGSTVEFSLWTGGQQGTAVGLYKVIGGGHGIPGRPQRMERVVGTYNQDVDGWAEIWKFLNDHHRGHEQKSINKQSDLKRGAKAVSR
>NZ_CP042912.1|WP_075081497.1|2864078_2864864_+|hypothetical-protein
MGKRIALTNGRRLVDDVIRMANRTPLASIACDWELREVAQLRRMAKPRISWNVLVMKAMAAVAEQMPMLKQGYVSFPWGHLYEHHQSVGMMTMSRQYRGEERLLFARFNEPNNHTLVDLQAQYDFYRKAPIEEIKQFRHQIMFAKCPSLLRRFAWWALFNVWPVKRAFHMGTFGMSISGHRGAYGSKHLGPNTATIGVDPMPKNGISRALFTFDHRVIDGAPASEIVLRTRNILNTAIRQELAKMAGVHPATLQPLKRNAA
>NZ_CP042912.1|WP_148618804.1|2880412_2881804_-|hypothetical-protein
MFSPKTTSMLFVLPLSIAAFLTTSANAQNAASVQYQARMAAIQQAQARAQTQQAVSQAEPVRVAQASATRVPRQVVPGQAASSSARSASQTYAPSGTRTAQLLTEGTVIDGGSPIMGETVLSQPVMSGEVIGAPMAGQPIYTDSIQGSIDSGVVYSDDVVVGCDSCGDSGSYFTDDCCGRGGCPDDTPCWQGPLGRALRSGSYFFGATAFQHPAYTSPVGTDLVQDSNFGAYAGFNLGIPLCRLFCGRVSGQFGMRSVQTNFGGSDVTEASRDQLFITAGLYRRVDYGLQAGLVVDVLAEEYFTESDIAQLRGELSWAYPNGGAIGFRFTSSQQDDTSLGIFDGTRFSGLTTTTDEHYRFFLRKVLSTGGWEEIFAGWTGNDHFAVGADFDIPVSQFMALEAGAAYYLNDTEAPNSNLGSSRIEDTFNIYVGFAFRPQGVAYYRSYDRPLLPVADNGTMIIRR
>NZ_CP042912.1|WP_084416660.1|2882126_2882987_+|porin-family-protein
MKTSFWFGQLNFTMYSKLICFLFVAVTLQSCVSQVEAQVTYALGDTPITSGARNVGPVRRAAQRVRSGSARVVPTFDKNGRFNREAAYSFNESRPLAGLFAPDFELTASVFGGWNRIVGLGPDSADDGNFDDDLAVGFAYGRRHNKRLRSEFEFTYRSNEASADVIGASMPQPLLGEVQVYSIMKNFVIDIEVPSQFATPYVGIGIGYAHFDADFNRSSGVVLENSSSFAWQPIGGVSLQLTERAFYYIEYRYFSTTELEVTQFGSDVEGVTYSAHNLFMGLRFEF
>NZ_CP042912.1|WP_075081486.1|2883071_2884559_-|hypothetical-protein
MSEPLLEPGLIGIKLGTYGVGAGTAIKDPRIVPTVQNYKRQIASRMFPLGRHDIDRKVADAEYYVSRKIDGEFTVCVFQDGQIYSVNPGGTVRVGMPWQKEALEILKAANVDSALFAGELHKEIDGDRRCRVHDVISSARQPKSEQDLQSLHFAVFDLIAINGETVDQPYAETWTKIEELFSGGSKIQPVETVKVKGRKAVKMKFDEWVDKEKAEGIVVRSDVAGNFKIKPLHTLDALVLGFTESTDDREGMLHDLLLGIVREDGAVQVMCRVGGGFSDDDRRGMLSDLKDMVVESEYAEVNSDHVAYQMVRPEWVIEITCLDIISQNTRGGPINRMVLNWNHETDAYEVVRRLPLVSIISPQFVRIREDKKFNKDDVRIAQITNVVPVQKVDVNATELKLSTSSVLKREVYTKTLKGKLMVRKFLMWKTNKENEGSEYPAYVVHYTDYSPGRKVPLDREVRISNSEQQINDLFEQLKKDNIKKGWAIQEPDAKA
>NZ_CP042912.1|WP_075081485.1|2884677_2885445_-|PEP-CTERM-sorting-domain-containing-protein
MIKPRFSLRPLLFALALSIVLPQTSRADIDFSSSIFEGTIVTQDDAAGYAVTADILESGSVVGQFSASVTYGAGTNTFNSGSSWGPSADGFGIYPDSTGSFAGDDTASGFWQISVTPNAGWTVDGISIFTVGTTIANPDFTSVTSDGVGSIFDENNLITNYTDGASFVDGDDILFAGGSITNGIPGSDHSRHWAYSSAGATQVSFNYLAGFDESVSTIGIEGLQVGMQLSAVPEPATATISLLLLAGLSVRRRRK
>NZ_CP042912.1|WP_075081484.1|2885963_2887304_-|ABC-transporter-permease
MIGTVAWHEFWFTVRKKSYYLVTLGMPLLALGYLGIITLIIAMTVPGEISRMSKPTGLIDQSGILTAEGAPLADAVPGEVFEIQQTDDASNDVPEELKKLTGDTDINRFFEQKVVLLDSVDAGRAELEDESWKAIVVIPPDYIESGQVEVYTRRSDLFGSSMKTGWLSKMIRHEILKKTELTENEVERIRNFAQATKFEINSEGKFEEVNLLSKGLSMGIPLAVAGLLVLALMMNASALLASIAEEKENKVMEVIVSSVSADDLLFGKVLGIVCAGLLQIAIWMVMVSVIPIILQTVMNEFVDYDINVLQLLISGVFMVMGFLFYGSLLAGMGSLGSTYKDCQQLSAAVIICACVPMMMPTVFISDPNAMVPRVLSMIPFFSPIGMTLRLGSGDIALWEAAVSFLILAVSTWFAIKIAARLFRAGTLMRGKPPGIREIWKVLTQRT
>NZ_CP042912.1|WP_075081483.1|2887300_2888245_-|ATP-binding-cassette-domain-containing-protein
MEIELQNVCKTYGRGANQKVAVDNVSWKSGGGEIFGLLGPNGAGKTTMIRMMLDIIRPDSGQILLNGDPAANRTIDFKRRIGYLPEERGLYQKRKVMDVLLYFAALKGFDRAAARIKAMELLERFELADCANKKIHDLSKGMGQKIQIASCVLHDPDLVVLDEPFSGLDPVNTRLIRETILDLRAAGKLVFLSTHMMAEVEALCDRIFMINDGKQVLYGSLDEIRKSYTRYEVLMDHDAETGGLDCIESITRSAQGQCIKLKNGRSMHDLMQELAAGKRNFRRFEEARMPIEDIFVEVVGKAPEYKATAAGVTT
>NZ_CP042912.1|WP_087149579.1|2888464_2890147_-|sodium/solute-symporter
MGPIDWAIVLVYFVLLILIVWFTSRKQDSADEYFLAGRNVGWFVIGCSLFASNVGSEHIVGLAGSGATQGMTMAHWELHAYILIMLGWIFVPFYYTSTVSTMPEFLEKRFGSATRWILSVVSLAAYVLTKVSVNVYAGAIVFETLLPNTFGSPAAAFWVGALTTVILTGIYTIFGGFRAVLFTDTAQAFILIIGSALITWIGLGKLGATGDLSGWAELQSFAKTNVAEYALWHPLSDPEFPWLGILMASPIIGIWYWCTDQYIVQRTLAAKNLTVARQGTIWGAFLKVWPVMIFLVPGMIAAALDAKGVIDLPVTGDGSIDGDKVFATMVTEMLPIGLRGLVIGGLLAALMSSLSSLFNSCATLFTIDIYQKLRPKTSQAQLVNVGRIATAIVVVLGILWIPILRSLSEDSGLYSYLQSVQGYLAPSITAVFLLGLFYQRTNSPGAIVGLVAGFVMGMGKLTIELLYATEEGAEPQNILNSIADINFLYASGILFAITVVMVLLVSHMTSPPKDENLQGLTWYSIDKMMVRDSWSTIDVITTAIVLGLVVAIYGYFSFWI
>NZ_CP042912.1|WP_148618805.1|2890472_2892110_+|hypothetical-protein
MLERLLFLPIWISSVFVDQLARLMRSLARMFFGLFDSDDDLDDDTDPRTRRKSKRLKRGMRRLRPYFIWGFVLLTLVGAAGLFLFRANRGYSKRLAERYELALAAAIESGDEHEAELFRRKLSQLGVSTDAGEFRTALALAEKGDVSGAYEMMQTMASADSPGYPWAHFWQAQQLIDGKLDVPTNEALPLALRHLEQVKTRSGKLAQINYLEGVAYVKMGQVDAAVDALEQASAEVPVANALLMELRRSSGDVEKAKSDAKKIRKYLSGKKIDGEKLTDVELRWQTSAARLLGDVDAETDAVQQWYEANPEDPRARFNQAVIHLRTVNAWLDEVDDRWLVEDARIPVQQLVDAAQLMPVGDYDRVRATLGEIWQKRKSSTTVQSYYDRLMGFDDAKDAETAAADESSLPMLTGKAIEFFGTSAAMEADWQAADRLLGLATESDPEWSHAWNNRAFVVGEGFPDRLEEAVGYADRAIELEPNNAEFHETRGMLNMKLQRWESAVSDLEIAVNGLVGQNKSIHRVLSQAHRRMGNENLAQTHERASK
>NZ_CP042912.1|WP_068267815.1|2893024_2893330_+|transposase
MSSNGKRTRRTFSEEFKRDAVNLIVSEGYSFRAAAEAVNVNENSLRNWHRKYAPEPEPCGPEASLQQVLEENKRLRKQLKRAELEREILKKATAYFAKESQ
>NZ_CP042912.1|WP_084416835.1|2893326_2894211_+|IS3-family-transposase
MKYAWIKQHRDQYSITLMCEIFGVSKSGYYDSIDRPESKRAVRSRAIRESVKQVYEESGQIYGSYKIAEELANDAQLETACRNTVATAMREMGLKSCVSRQFKPTTTKSDPDKKPAENLLSQEFDAEAPNRKWVADITYLPTVGGWVYLAVVLDLFSRKVVGWQMSDRLTTPIVTEALRKAIESRRPESGTLLHHSDRGCQYTSDAFQGILRTLNIQCSMSRTGCCYDNAVMERFFWSLKHEWTKHRRYGNLEEARISVFKYIEAFYNSKRIHQTLGYQTPEEFERNYRAALAA

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Crispr_ID: NZ_CP042912_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_8

2879231-2879517

Orphan

Consensus_repeat	Method
ACTGAAACTCGTACTCGTCAGGTTCCTGTAACCAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP042912_8

>merge|NZ_CP042912|8|2879231-2879517|CRISPRCasFinder
ACTGAAACTCGTACTCGTCAGGTTCCTGTAACCAAGACTCGTGTTGAAACCAAAACTCGTACTGTTCCAGTTCAGAAAGTTCGTACTGAAACTCGTACTCGTCAGGTTCCTGTAACCAAAACGAAGGTTGAAACTCGTCAGCGTACCGTTGCAGTTCAGAAGTCACGAACTGAAACTCGTACTCGTCAGGTTCCAGTTCAGCGTACTCGTCTTGAGACACGTACTCGTACGGTTGCTGTTACTAAGATGAAGACAGAAACTCGTACACGTGAAGTACCTGTTCAGCG

>NZ_CP042912|8|4|2879231-2879517|CRISPRCasFinder
ACTGAAACTCGTACTCGTCAGGTTCCTGTAACCAA	GACTCGTGTTGAAACCAAAACTCGTACTGTTCCAGTTCAGAAAGTTCGT
ACTGAAACTCGTACTCGTCAGGTTCCTGTAACCAA	AACGAAGGTTGAAACTCGTCAGCGTACCGTTGCAGTTCAGAAGTCACGA
ACTGAAACTCGTACTCGTCAGGTTCCAGTTCAGCG	TACTCGTCTTGAGACACGTACTCGTACGGTTGCTGTTACTAAGATGAAG
ACAGAAACTCGTACACGTGAAGTACCTGTTCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075081496.1\|2865018_2866149_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|226040
NZ_CP042912.1\|WP_084416660.1\|2882126_2882987_+\|porin-family-protein	unknown	unknown	gnl\|CDD\|226163
NZ_CP042912.1\|WP_075081493.1\|2871925_2872846_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_148618802.1\|2873151_2875137_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081483.1\|2887300_2888245_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213236
NZ_CP042912.1\|WP_075081610.1\|2866185_2867298_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP042912.1\|WP_148618804.1\|2880412_2881804_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP042912.1\|WP_148618805.1\|2890472_2892110_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042912.1\|WP_084416835.1\|2893326_2894211_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042912.1\|WP_075081484.1\|2885963_2887304_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NZ_CP042912.1\|WP_075081495.1\|2869448_2870309_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075081491.1\|2875232_2876243_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP042912.1\|WP_075081486.1\|2883071_2884559_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224706
NZ_CP042912.1\|WP_075081609.1\|2867968_2869273_+\|ammonium-transporter	unknown	unknown	gnl\|CDD\|274697
NZ_CP042912.1\|WP_075081494.1\|2870571_2871894_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340851
NZ_CP042912.1\|WP_087149579.1\|2888464_2890147_-\|sodium/solute-symporter	unknown	unknown	gnl\|CDD\|271363
NZ_CP042912.1\|WP_075081490.1\|2876287_2876812_-\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377164
NZ_CP042912.1\|WP_068267815.1\|2893024_2893330_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP042912.1\|WP_075081485.1\|2884677_2885445_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|131644
NZ_CP042912.1\|WP_075081497.1\|2864078_2864864_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075081496.1\|2865018_2866149_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|226040	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism].	6.16417e-52
NZ_CP042912.1\|WP_084416660.1\|2882126_2882987_+\|porin-family-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	4.0552e-09
NZ_CP042912.1\|WP_075081483.1\|2887300_2888245_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213236	cd03269, ABC_putative_ATPase, ATP-binding cassette domain of an uncharacterized transporter. This subgroup is related to the subfamily A transporters involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two integral membranes. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.35823e-102
NZ_CP042912.1\|WP_075081610.1\|2866185_2867298_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	9.50876e-120
NZ_CP042912.1\|WP_148618804.1\|2880412_2881804_-\|hypothetical-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	0.00214896
NZ_CP042912.1\|WP_084416835.1\|2893326_2894211_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.31945e-73
NZ_CP042912.1\|WP_075081484.1\|2885963_2887304_-\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	4.54957e-29
NZ_CP042912.1\|WP_148618805.1\|2890472_2892110_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.44598e-06
NZ_CP042912.1\|WP_075081491.1\|2875232_2876243_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP042912.1\|WP_075081486.1\|2883071_2884559_-\|hypothetical-protein	gnl\|CDD\|224706	COG1793, CDC9, ATP-dependent DNA ligase [DNA replication, recombination, and repair].	3.64936e-15
NZ_CP042912.1\|WP_075081609.1\|2867968_2869273_+\|ammonium-transporter	gnl\|CDD\|274697	TIGR03644, marine_trans_1, probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.	7.12701e-122
NZ_CP042912.1\|WP_075081494.1\|2870571_2871894_-\|glycosyltransferase	gnl\|CDD\|340851	cd03825, GT4_WcaC-like, putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.	1.83852e-100
NZ_CP042912.1\|WP_087149579.1\|2888464_2890147_-\|sodium/solute-symporter	gnl\|CDD\|271363	cd10329, SLC5sbd_SGLT1-like, Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain. This subfamily includes the solute-binding domain of SGLT proteins that cotransport Na+ with various solutes. Its members include: the human glucose (SGLT1, -2, -4, -5 ), chiro-inositol (SGLT5), and myo-inositol (SMIT) cotransporters. It also includes human SGLT3 which has been characterized as a glucose sensor and not a transporter. It belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP042912.1\|WP_075081490.1\|2876287_2876812_-\|PepSY-domain-containing-protein	gnl\|CDD\|377164	pfam03929, PepSY_TM, PepSY-associated TM region. The PepSY_TM family is so named because it is an alignment of up to five transmembranes helices found in bacterial species some of which carry a nested PepSY domain, pfam03413.	1.32994e-14
NZ_CP042912.1\|WP_068267815.1\|2893024_2893330_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.79379e-08
NZ_CP042912.1\|WP_075081485.1\|2884677_2885445_-\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|131644	TIGR02595, conserved_hypothetical_protein, PEP-CTERM protein-sorting domain. This model describes a 25-residue domain that includes a near-invariant Pro-Glu-Pro (PEP) motif, a thirteen residue strongly hydrophobic sequence likely to span the membrane, and a five-residue strongly basic motif that often contains four Arg residues. In nearly every case, this motif is found within nine residues, and usually within five residues, of the extreme C-terminus of the protein. Proteins with this motif typically have signal sequences at the N-terminus. This region appears many times per genome or not at all, and co-occurs in genomes with a proposed protein-sorting integral membrane protein we designate exosortase (see TIGR02602). PEP-CTERM proteins frequently are poorly conserved, Ser/Thr-rich proteins and may become extensively modified proteinaceous constituents of extracellular material in bacterial biofilms. [Cell envelope, Surface structures].	0.00127545

>NZ_CP042912.1|WP_075081490.1|2876287_2876812_-|PepSY-domain-containing-protein
MNRWSRRLHRWGGILIAIPLLLVIATGLILQFKKEFAWIQPKTLSGSPNQMTIGWPKVLESAMGDEDARINSWADVDRLDVRPAKGVIKVRAKNGWEVQLDSATGEILSSAYRRSDFIESLHDGSYFSDFVKLYVFSANGMILLGLWISGIYLWFLPIQAKRKKKRRLAKKAQP
>NZ_CP042912.1|WP_075081491.1|2875232_2876243_+|UDP-glucose-4-epimerase-GalE
MNILVVGGAGYIGSHMVRLLDSAGHKVWVLDNLSTGFMQAVTAGELIVGDMNDSELVKSVLGDNRIDIVMHFAACALVGESCANPAKYYQNNVVNTLLLLESMRATNVRKIVFSSTCATYGIPDKVPISEATPQQPVNPYGFTKLVIERALRDYSQAHNFGYAALRYFNAAGASPLGGIGEDHTPESHLIPIVLQVAMGQREQVTVFGNDWPTLDGSCVRDYIHVDDLADAHLRAMERLKPGTGIELNLGTGTGFSVRQIIETCREVTNVDIKSVDGDRRAGDPPELVADASKAESELGWVPQYTSPRSIIETAWEWHRNNPAGYGDTALAEGQVE
>NZ_CP042912.1|WP_148618802.1|2873151_2875137_+|hypothetical-protein
MARLYIIDQSLCKPGGHHFDYVNCVARAAHLDSHETIVATNRRFVSRRQTKNDAELPLHTIAKVVPSFRNSTYQKVSWLAGLRHLKRATSIEDLSVEEHASRLFSMQRFLRRRRTKLFRKQRRKVIAQFACDCSRFFGAAVPEKFERGDQIFFTTVSELELMGLAIYLASNPSSRLATWHLQFHFNLFDGRTPEFESQSAVQRKVRGCFLAALSRIPDHNLMFYCTSEELVEQYSRLNVADFWRLPYPVNQRFSPEGNRIETRTVDAAKIPAKAFATSSNAAGLTHDPENVDSFETSERATTSSVLPRITSHSGTARMVVPGELRREKGSAVHLQGVIDGLWDEYLSTGRLQVAVQRPNRKMLGRQKLELTLPEGSHGVTDAPVIDYLRHPLSEEQYCRFIRGADFGLLLHDSRAYYSRRAGVLGELLSCGKPVIVPAGCWLAHQLQEPQFRHVDRMMRQLPSGRKVELREMSFDSDNAPLSGGIVSFDRQRHPFRADCAKSPDENIVIVSFDWQHPQSRGVDARIHCTESTADGSQQTSTQVVGHRFSAGKCHVMFRVDFGGNKIGLEIENAFDDSTASIRNLSMDLFQADNPRQVPLGAIGMIYADRDSIQDCVAELVEHLDHYQFSAQDYSQRWWNAHDPKRTLDYLVGSGNANLSVA
>NZ_CP042912.1|WP_075081493.1|2871925_2872846_-|hypothetical-protein
MTQTRKHVVILPHFCEEEVDRYLRIATLLKSWPKPKVETDFLLAASPKRKPSQRLVEAYQSLGNAIPFQCPTQIFGYPEGPTAMFWDCMEYVEQAYQNNDGFSLWLESDMCPTQSDWIDRLSQMWYSGSQRPLMMGCYVPEVYKYRILKRPKRILEPHINGGACYAMNFASQMPTDAREGVFDMAVYQFAKARGLARECRAISFSTTDRVRRDLMDASKVLLHGFMQEKDEFIEDCIRPLDGAELQKAKWNALQEQIETTRRKLRVWFVRRGREAMLENMFLAKQRYEQDNPVEELAETTHSRKAA
>NZ_CP042912.1|WP_075081494.1|2870571_2871894_-|glycosyltransferase
MKVSHFNTFPYGGAATAARRLSRRLRKSGVRSTFYYSRSDRDDVVQIGNKSEAIEQTQIAAEPSTNGLSMFARRREKKRLREIWRLHNEHIATRPAGEETFSMARLPDESTLNWFQINSDIVHLHWISFFADYPSFFRSIPDHVPLVWTLHDQNAFTGGCHYAGGCEKYQKGCGSCPQVTNAHSRDVSVDSFQTKRRALSGRNVHVVAPSRWMLDLAKQSPVWPRTASFHHIRLGFNLKKFYPVDRIHARKQLGIRSDAFLIGFGADDVRSKRKGVGSLVSALDHVSTDQEVEGIVFGSGEVQSTGRVKKFHELGYVDSIDRQRLIYSAADVVVVPSTEDNQPQVGLEAMACGTPVVGFDTCGIPEMVQNGKTGLLAKAGDSQDLAKQISWIINNPLQRQQMGIEARKMMELNHDSEIQAAQYIQLYENATQFGRKLKAA
>NZ_CP042912.1|WP_075081495.1|2869448_2870309_-|hypothetical-protein
MRNNFSVLTPFVIALSLLQTSWANNNHFLPGDAFFPTELTKADVERIQKAKGNINFKYSKLGGYGGAFCGGAGYHKASMPVADDAFAKNLAKAYERIREFEDRELIEFEGEDGKIEYDEINGVKVLFYNSDFDFNKHALGLRYNENWLKEVVAFGHSRDHARLCCLLQSQEAVTTSWRDGDLVPAFKAKTPNADGKSLRETMGEPIVFDTKVKAIVIPASTSLDDLFERSAGSQLLVVDSSGVKEMRIENYKWQEGNIDIGGFGAGKDSKDGEKSKGGGRSNGGVF
>NZ_CP042912.1|WP_075081609.1|2867968_2869273_+|ammonium-transporter
MIAGMLVFIMHLGFATLESGLTRSKNTVNILFKNTAIVCLGLISYAVMGFLMMYPASFLEYSGWSEAEQANYLETTEDGFLKKNGYFAFDGFGMVMNGPTQAAVGDEATAEEIAGFNAASTEEGYGNPYTLFTDFFFQAMFAATCCTIVSGAVAGRIKLGTFLIFCLFFVSLSYPITGSWKWGYGWLDRAGFYDFAGSTLVHSVGGWGALVMAFLLGPRAGKYVNGKAMAIAPSNMPMATIGVFLLWFGWFGFNGGSVLSADPGLVSLTLCTTSMAAAAGGLAAALVSTVHGKKPDLSMTLNGILAGLVGITAGADQMSLLEAIIIGLIAGVLVYVAVIFIDGVLKIDDPVGAISVHLVCGIWGTLAVGIFGAMAGTEQLLIQVKGIVAIGLFTLLFCLVLGLILKFTLGLRVSEAEEQEGLDLGEHGIHAYSL
>NZ_CP042912.1|WP_075081610.1|2866185_2867298_+|A/G-specific-adenine-glycosylase
MINDSPILLTESTAAERTKFRRALLKWFDSHQRDLPWRKDRTPYRIWVSEIMLQQTQVATVIDYFKRFMKRFPTVSKLAAADQSEVLKLWEGLGYYRRARQLHTAASVVVERHRGNFPETFDEVLALPGIGRYTAGAILSISLDQQLPILEGNTIRLFARLMQMESDPRSSANQKLLWQFSESLLPKKRAGDFNQSLMEIGSEICTPRCPKCSECPIIKFCPTFRGGLQNQIPAPSVKMKYESIREAVVLVSKVTRGQTKFLVRLCGEGERWTGLWDFPRFELGNRRAEVWLPEQIKSLTGLDVSVGSSSLQMKHAVTRFRITLDVFSSEQVTGRLKSGAASELRWATNKELLEMPMSTTGRKIADRCCI
>NZ_CP042912.1|WP_075081496.1|2865018_2866149_+|prolyl-oligopeptidase-family-serine-peptidase
MRNFLTASVAVLFLFAVTLSVSQLHSQSLQEESKSQGRDNVDAKPRGGNWLRRQKLEPTGVEVQLEHQGRDRKYRIHVPDSVDAATPVPLVICLHGGGGNSDQGSVMGVTPLADEHNFIVVYPNAIDKHWNCGRDSELFREHNRTIDDVDFLMSIVAKVRKQYRVDEKRIFAVGVSNGGFMTQRLAMEHPETFSAVGIVIATMAESLEKDFKPTLPVSVVYMNGTSDPLVPYDGGALTVDLFPKLRKAMNRKLEDRGSCVSTDAAVEHWVKRNGIKAKPAVSTFEDVNEEDGSTVEFSLWTGGQQGTAVGLYKVIGGGHGIPGRPQRMERVVGTYNQDVDGWAEIWKFLNDHHRGHEQKSINKQSDLKRGAKAVSR
>NZ_CP042912.1|WP_075081497.1|2864078_2864864_+|hypothetical-protein
MGKRIALTNGRRLVDDVIRMANRTPLASIACDWELREVAQLRRMAKPRISWNVLVMKAMAAVAEQMPMLKQGYVSFPWGHLYEHHQSVGMMTMSRQYRGEERLLFARFNEPNNHTLVDLQAQYDFYRKAPIEEIKQFRHQIMFAKCPSLLRRFAWWALFNVWPVKRAFHMGTFGMSISGHRGAYGSKHLGPNTATIGVDPMPKNGISRALFTFDHRVIDGAPASEIVLRTRNILNTAIRQELAKMAGVHPATLQPLKRNAA
>NZ_CP042912.1|WP_148618804.1|2880412_2881804_-|hypothetical-protein
MFSPKTTSMLFVLPLSIAAFLTTSANAQNAASVQYQARMAAIQQAQARAQTQQAVSQAEPVRVAQASATRVPRQVVPGQAASSSARSASQTYAPSGTRTAQLLTEGTVIDGGSPIMGETVLSQPVMSGEVIGAPMAGQPIYTDSIQGSIDSGVVYSDDVVVGCDSCGDSGSYFTDDCCGRGGCPDDTPCWQGPLGRALRSGSYFFGATAFQHPAYTSPVGTDLVQDSNFGAYAGFNLGIPLCRLFCGRVSGQFGMRSVQTNFGGSDVTEASRDQLFITAGLYRRVDYGLQAGLVVDVLAEEYFTESDIAQLRGELSWAYPNGGAIGFRFTSSQQDDTSLGIFDGTRFSGLTTTTDEHYRFFLRKVLSTGGWEEIFAGWTGNDHFAVGADFDIPVSQFMALEAGAAYYLNDTEAPNSNLGSSRIEDTFNIYVGFAFRPQGVAYYRSYDRPLLPVADNGTMIIRR
>NZ_CP042912.1|WP_084416660.1|2882126_2882987_+|porin-family-protein
MKTSFWFGQLNFTMYSKLICFLFVAVTLQSCVSQVEAQVTYALGDTPITSGARNVGPVRRAAQRVRSGSARVVPTFDKNGRFNREAAYSFNESRPLAGLFAPDFELTASVFGGWNRIVGLGPDSADDGNFDDDLAVGFAYGRRHNKRLRSEFEFTYRSNEASADVIGASMPQPLLGEVQVYSIMKNFVIDIEVPSQFATPYVGIGIGYAHFDADFNRSSGVVLENSSSFAWQPIGGVSLQLTERAFYYIEYRYFSTTELEVTQFGSDVEGVTYSAHNLFMGLRFEF
>NZ_CP042912.1|WP_075081486.1|2883071_2884559_-|hypothetical-protein
MSEPLLEPGLIGIKLGTYGVGAGTAIKDPRIVPTVQNYKRQIASRMFPLGRHDIDRKVADAEYYVSRKIDGEFTVCVFQDGQIYSVNPGGTVRVGMPWQKEALEILKAANVDSALFAGELHKEIDGDRRCRVHDVISSARQPKSEQDLQSLHFAVFDLIAINGETVDQPYAETWTKIEELFSGGSKIQPVETVKVKGRKAVKMKFDEWVDKEKAEGIVVRSDVAGNFKIKPLHTLDALVLGFTESTDDREGMLHDLLLGIVREDGAVQVMCRVGGGFSDDDRRGMLSDLKDMVVESEYAEVNSDHVAYQMVRPEWVIEITCLDIISQNTRGGPINRMVLNWNHETDAYEVVRRLPLVSIISPQFVRIREDKKFNKDDVRIAQITNVVPVQKVDVNATELKLSTSSVLKREVYTKTLKGKLMVRKFLMWKTNKENEGSEYPAYVVHYTDYSPGRKVPLDREVRISNSEQQINDLFEQLKKDNIKKGWAIQEPDAKA
>NZ_CP042912.1|WP_075081485.1|2884677_2885445_-|PEP-CTERM-sorting-domain-containing-protein
MIKPRFSLRPLLFALALSIVLPQTSRADIDFSSSIFEGTIVTQDDAAGYAVTADILESGSVVGQFSASVTYGAGTNTFNSGSSWGPSADGFGIYPDSTGSFAGDDTASGFWQISVTPNAGWTVDGISIFTVGTTIANPDFTSVTSDGVGSIFDENNLITNYTDGASFVDGDDILFAGGSITNGIPGSDHSRHWAYSSAGATQVSFNYLAGFDESVSTIGIEGLQVGMQLSAVPEPATATISLLLLAGLSVRRRRK
>NZ_CP042912.1|WP_075081484.1|2885963_2887304_-|ABC-transporter-permease
MIGTVAWHEFWFTVRKKSYYLVTLGMPLLALGYLGIITLIIAMTVPGEISRMSKPTGLIDQSGILTAEGAPLADAVPGEVFEIQQTDDASNDVPEELKKLTGDTDINRFFEQKVVLLDSVDAGRAELEDESWKAIVVIPPDYIESGQVEVYTRRSDLFGSSMKTGWLSKMIRHEILKKTELTENEVERIRNFAQATKFEINSEGKFEEVNLLSKGLSMGIPLAVAGLLVLALMMNASALLASIAEEKENKVMEVIVSSVSADDLLFGKVLGIVCAGLLQIAIWMVMVSVIPIILQTVMNEFVDYDINVLQLLISGVFMVMGFLFYGSLLAGMGSLGSTYKDCQQLSAAVIICACVPMMMPTVFISDPNAMVPRVLSMIPFFSPIGMTLRLGSGDIALWEAAVSFLILAVSTWFAIKIAARLFRAGTLMRGKPPGIREIWKVLTQRT
>NZ_CP042912.1|WP_075081483.1|2887300_2888245_-|ATP-binding-cassette-domain-containing-protein
MEIELQNVCKTYGRGANQKVAVDNVSWKSGGGEIFGLLGPNGAGKTTMIRMMLDIIRPDSGQILLNGDPAANRTIDFKRRIGYLPEERGLYQKRKVMDVLLYFAALKGFDRAAARIKAMELLERFELADCANKKIHDLSKGMGQKIQIASCVLHDPDLVVLDEPFSGLDPVNTRLIRETILDLRAAGKLVFLSTHMMAEVEALCDRIFMINDGKQVLYGSLDEIRKSYTRYEVLMDHDAETGGLDCIESITRSAQGQCIKLKNGRSMHDLMQELAAGKRNFRRFEEARMPIEDIFVEVVGKAPEYKATAAGVTT
>NZ_CP042912.1|WP_087149579.1|2888464_2890147_-|sodium/solute-symporter
MGPIDWAIVLVYFVLLILIVWFTSRKQDSADEYFLAGRNVGWFVIGCSLFASNVGSEHIVGLAGSGATQGMTMAHWELHAYILIMLGWIFVPFYYTSTVSTMPEFLEKRFGSATRWILSVVSLAAYVLTKVSVNVYAGAIVFETLLPNTFGSPAAAFWVGALTTVILTGIYTIFGGFRAVLFTDTAQAFILIIGSALITWIGLGKLGATGDLSGWAELQSFAKTNVAEYALWHPLSDPEFPWLGILMASPIIGIWYWCTDQYIVQRTLAAKNLTVARQGTIWGAFLKVWPVMIFLVPGMIAAALDAKGVIDLPVTGDGSIDGDKVFATMVTEMLPIGLRGLVIGGLLAALMSSLSSLFNSCATLFTIDIYQKLRPKTSQAQLVNVGRIATAIVVVLGILWIPILRSLSEDSGLYSYLQSVQGYLAPSITAVFLLGLFYQRTNSPGAIVGLVAGFVMGMGKLTIELLYATEEGAEPQNILNSIADINFLYASGILFAITVVMVLLVSHMTSPPKDENLQGLTWYSIDKMMVRDSWSTIDVITTAIVLGLVVAIYGYFSFWI
>NZ_CP042912.1|WP_148618805.1|2890472_2892110_+|hypothetical-protein
MLERLLFLPIWISSVFVDQLARLMRSLARMFFGLFDSDDDLDDDTDPRTRRKSKRLKRGMRRLRPYFIWGFVLLTLVGAAGLFLFRANRGYSKRLAERYELALAAAIESGDEHEAELFRRKLSQLGVSTDAGEFRTALALAEKGDVSGAYEMMQTMASADSPGYPWAHFWQAQQLIDGKLDVPTNEALPLALRHLEQVKTRSGKLAQINYLEGVAYVKMGQVDAAVDALEQASAEVPVANALLMELRRSSGDVEKAKSDAKKIRKYLSGKKIDGEKLTDVELRWQTSAARLLGDVDAETDAVQQWYEANPEDPRARFNQAVIHLRTVNAWLDEVDDRWLVEDARIPVQQLVDAAQLMPVGDYDRVRATLGEIWQKRKSSTTVQSYYDRLMGFDDAKDAETAAADESSLPMLTGKAIEFFGTSAAMEADWQAADRLLGLATESDPEWSHAWNNRAFVVGEGFPDRLEEAVGYADRAIELEPNNAEFHETRGMLNMKLQRWESAVSDLEIAVNGLVGQNKSIHRVLSQAHRRMGNENLAQTHERASK
>NZ_CP042912.1|WP_068267815.1|2893024_2893330_+|transposase
MSSNGKRTRRTFSEEFKRDAVNLIVSEGYSFRAAAEAVNVNENSLRNWHRKYAPEPEPCGPEASLQQVLEENKRLRKQLKRAELEREILKKATAYFAKESQ
>NZ_CP042912.1|WP_084416835.1|2893326_2894211_+|IS3-family-transposase
MKYAWIKQHRDQYSITLMCEIFGVSKSGYYDSIDRPESKRAVRSRAIRESVKQVYEESGQIYGSYKIAEELANDAQLETACRNTVATAMREMGLKSCVSRQFKPTTTKSDPDKKPAENLLSQEFDAEAPNRKWVADITYLPTVGGWVYLAVVLDLFSRKVVGWQMSDRLTTPIVTEALRKAIESRRPESGTLLHHSDRGCQYTSDAFQGILRTLNIQCSMSRTGCCYDNAVMERFFWSLKHEWTKHRRYGNLEEARISVFKYIEAFYNSKRIHQTLGYQTPEEFERNYRAALAA

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Crispr_ID: NZ_CP042912_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_9

3156571-3156678

Orphan

Consensus_repeat	Method
CGGCGGCTAGCGCCTTGCCGCTCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042912_9

>merge|NZ_CP042912|9|3156571-3156678|CRISPRCasFinder
CGGCGGCTAGCGCCTTGCCGCTCACTACAGGTTCGTTGCTCGCCGGCTTATACCGAGTTATACCGGCTTGTACCGACTTATGCCGGCGGCTAGCGCCTTGCCGCTCAC

>NZ_CP042912|9|5|3156571-3156678|CRISPRCasFinder
CGGCGGCTAGCGCCTTGCCGCTCAC	TACAGGTTCGTTGCTCGCCGGCTTATACCGAGTTATACCGGCTTGTACCGACTTATGC
CGGCGGCTAGCGCCTTGCCGCTCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075086390.1\|3141454_3143818_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275079
NZ_CP042912.1\|WP_084416794.1\|3162599_3164090_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP042912.1\|WP_075086389.1\|3143843_3144680_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075086378.1\|3161156_3161978_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130902
NZ_CP042912.1\|WP_075086384.1\|3151603_3153034_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP042912.1\|WP_075086385.1\|3149592_3151416_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075082382.1\|3164138_3164933_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224401
NZ_CP042912.1\|WP_075086388.1\|3144829_3145816_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP042912.1\|WP_075084562.1\|3165030_3166149_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143478
NZ_CP042912.1\|WP_075086386.1\|3147409_3149584_+\|polyphosphate-kinase-1	unknown	unknown	gnl\|CDD\|235469
NZ_CP042912.1\|WP_084417467.1\|3153302_3155543_-\|1,4-alpha-glucan-branching-protein-GlgB	unknown	unknown	gnl\|CDD\|235445
NZ_CP042912.1\|WP_075086387.1\|3145812_3147390_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|223326
NZ_CP042912.1\|WP_084417119.1\|3166415_3167969_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP042912.1\|WP_075086381.1\|3157693_3158413_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP042912.1\|WP_075086544.1\|3156712_3156907_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_148618825.1\|3140920_3141121_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075086379.1\|3160156_3160942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075086380.1\|3158425_3160033_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP042912.1\|WP_075086382.1\|3156921_3157599_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_157665258.1\|3155584_3156265_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178927

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075086390.1\|3141454_3143818_+\|hypothetical-protein	gnl\|CDD\|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	1.48892e-09
NZ_CP042912.1\|WP_084416794.1\|3162599_3164090_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.54756e-23
NZ_CP042912.1\|WP_157665258.1\|3155584_3156265_-\|hypothetical-protein	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	3.72679e-15
NZ_CP042912.1\|WP_075086384.1\|3151603_3153034_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP042912.1\|WP_084417467.1\|3153302_3155543_-\|1,4-alpha-glucan-branching-protein-GlgB	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP042912.1\|WP_075082382.1\|3164138_3164933_+\|ATP-binding-protein	gnl\|CDD\|224401	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair].	6.98065e-67
NZ_CP042912.1\|WP_075086381.1\|3157693_3158413_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	1.2011e-69
NZ_CP042912.1\|WP_075084562.1\|3165030_3166149_+\|hypothetical-protein	gnl\|CDD\|143478	cd07562, Peptidase_S41_TRI, Tricorn protease; serine protease family S41. The tricorn protease (TRI), a member of the S41 peptidase family and named for its tricorn-like shape, exists only in some archaea and eubacteria. It has been shown to act as a carboxypeptidase, involved in the degradation of proteasomal products to preferentially yield di- and tripeptides, with subsequent and final degradations to free amino acid residues by tricorn interacting factors, F1, F2 and F3. Tricorn is a hexameric D3-symmetric protease of 720kD, and can self-associate further into a giant icosahedral capsid structure containing twenty copies of the complex. Each tricorn peptidase monomer consists of five structural domains: a six-bladed beta-propeller and a seven-bladed beta-propeller that limit access to the active site, the two domains (C1 and C2) that carry the active site residues, and a PDZ-like domain (proposed to be important for substrate recognition) between the C1 and C2 domains. The active site tetrad residues are distributed between the C1 and C2 domains, with serine and histidine on C1 and serine and glutamate on C2.	1.26336e-71
NZ_CP042912.1\|WP_075086378.1\|3161156_3161978_+\|hypothetical-protein	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	0.00629188
NZ_CP042912.1\|WP_075086387.1\|3145812_3147390_+\|HD-domain-containing-protein	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	1.58355e-62
NZ_CP042912.1\|WP_084417119.1\|3166415_3167969_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP042912.1\|WP_075086388.1\|3144829_3145816_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.09655e-60
NZ_CP042912.1\|WP_075086380.1\|3158425_3160033_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP042912.1\|WP_075086386.1\|3147409_3149584_+\|polyphosphate-kinase-1	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0

>NZ_CP042912.1|WP_157665258.1|3155584_3156265_-|hypothetical-protein
MPTTAPHYLLLTETDDRSADNHGGRWRFVLESMTSDDDRIEVSERESDIKGERLQLLAVVRGVEALEQPSRLTLITSSAYVGKRIRKGFDRWIENEWRWERFGALKPIKDADLWKRIHAATLIHKIECRLWQFGTQRRTVEPQNAEMNSWTRIDDNHSTPRRPFGPVEFENNRNTVRQPELATASHGTYHEPRFVATKTGWTRVTEIDPDTNQPLQFPQAFGETAH
>NZ_CP042912.1|WP_084417467.1|3153302_3155543_-|1,4-alpha-glucan-branching-protein-GlgB
MKTMPALDIGAFKNIIDGKHTNPNAILGPIRLDGPRTREKIRENPHHTTTIRAFLPDADKAWISTESGTVTQQMQPISQCGLFEVSCETDLFQVDSGRYKIQFSDGKQKMSIHDPYAFEPLLSDLDLHLFNEGTHFKIYERLGAHPREIDGIHGINFAVWAPNAQGVSVIGDFNEWDGRRHAMRKQIPSGIWEIFVPELGVDEVYKFRVTDCHGTQVEKSDPFGYFAEVPPKTASIVKDLSGYQWNDDDWMKQRAESNQLEKPISVYEIHPGSWKTKNGQPNGWMNYRDLAHDLVEYCLELGFTHVELMPITEHPYTGSWGYQTVGYFAPTSRYGDTDDFMYFVDYLHQNGLGVIVDWVPAHFPKDGHGLAKFDGTALFEHADPRQGEHPDWDTLIFNYKRTEVSNFLIANAMFWLEKYHIDGLRVDAVASMLYLDYSRKDGEWVPNEYGGRENLGAIDFLKRLNTHVHEDFPGVLTIAEESTAFGGVSRPVKDGGLGFSIKWNMGWMNDSLRYFQKEPIHRKYHHDELTFSLIYAFSENFMLPFSHDEVVHGKGALLDQMPGDIWQKFANLRLLYSYMWAHPGKKLMFMGCEWGQWNEWSCDSGLQWDLLQWESHEGVQRMVGDLNRLYREQPALYELDFDGNGFEWIDCMNRDASVLAWMRKAKDPNDFVIVCGNFTPYVHSNYRVGVPGPGIYKSIFNSDSKFYSGTNVGVGEVVAEEVEAQGKSWSIAIDFPPLATVMYKRD
>NZ_CP042912.1|WP_075086384.1|3151603_3153034_+|replicative-DNA-helicase
MTDQPPFDKKRSKKKKKATAIDRQPPFNLDAEAGVLGSLMLTPDACDDIVAILRPEDFYDEAHAIIFRHMMELHSKGEKIDLLLLRERLAASGDDDIVGGAARLAEIFTSVPHAAHVQYYAQIVRNKSTARNLISTCSELLNDAFMPEVDPNELLNEAEQKVFSIRESRQSNNLSSIDEVLELAMDRLEAKVRGEAMEGTVETHFKDLDKMMGGLHASELLILAARPSMGKTAFAMNIAENVVIKSRKPVLFISLEMAAIELIERMLCSVARVNGHRLRNGTLATDDRKRLVKVAGELSTVPLFIDDSPTRNVSEIAGAARRIVRREGSLSLIVIDYLQLIQPDSSSDPRQEQVAKMARRLKALARELKVPILCLSQLNRQTESSGDHRPKLSHLRESGAIEQDADVVMFVHRESYYKKGTPEEEETMKDAVIIIEKQRNGPTGDVELLWERDFTRFSDRAPERYSEFDNMPQAQF
>NZ_CP042912.1|WP_075086385.1|3149592_3151416_+|hypothetical-protein
MEESGIEITPLGDGVEICLPCRLLGGVARAGWFVIAFGAMATLFMISWISVPVGWGINVVWQGNIFGLLLVGFGCFGLVGLYGTAKLLALGMAIVHNRTRCVVTVGPKRIVSCERFGWFSFKTKINRGDVKQLFVLPLAAVKSGERDSDDEQKALGLLGTFFGGDASDFFSISTRKLKGKLIAPAYPADVLQPVAAAVAQELNRNRSDAVLIVRDSSKQQQPSPKVGVTVEQLSKDEIESADFELPEDSELEAIEEGDSVVYRIPKRTLSKGSNGLFMFSVFWNGFLLLVTLAMIKANAFDWPPIAIITGFWLVGIGLLVTAIYLARQSAMIGVKDRMLFIERTTIFGTRWTEFQSAAVESLEVADANMEVNGVPVMNLRIQPHEGKAVKMFSHLDPQELRWLAQQLRRELGVEEKRLQLNAETFDYSSAESEPHQTDIEVHRDADSTAIRVPPLDFEGSATFQIIGLTMCLLPFPGVLAAIWFAGFDFMFVMFGIVATAIGATMVAIHRVISTRQFQIDVSRNQLDVRVDGFMTNRHHVLSYPQIRSVEVVDSGVKVNNRSMYCLKVKAKQGAGVSIMTGRRQDELVYVASLIREKLNLDPASKSD
>NZ_CP042912.1|WP_075086386.1|3147409_3149584_+|polyphosphate-kinase-1
MKKKKNLYLPREASWIEFNKRVLDRAFMESVPLLERVKFLAITASNLDEFMMVRFGGLKMVKRSSSGITDISGLDANEQIKMIRERVRDMQNRQIDCLGELLPKLAECGIRKLGRTELSDIQRDFLRSHFESEIVTSMAPIGVDESHPPAFIRGLRLHVCVRIKDSKESRLIPKDAATSEDSSLYAEADAAKTDSAHRFVIIPLPRNLARVWAVPTSDQYSFMFLEDIIGLFVEDLFPGQEVLDWTTFRVTRNGDVVLADDDGRADLLRGMEEVIEARKMTDCIRLEISSKASKATGRFLQKLLNVEEPDTYRLAGPLALVDLFAIGGLPGFQHLKNEPWPPHGVPEFDRDDDIFATIAQKDRLIHHPYQSYDAVVNFIRAAATDDRVIAIKQTLYRTARDSEIAAALETAVANGKNVTCIVELKARFDEARNIEWAKRLEAAGVDVIYGVRGLKTHAKMCVVIRKEATGIQRYMHLATGNYNESTARVYSDVSFFTCDEQLGRDAVHLFNAITGLSVPQSMGKIAAAPINLRETTLEYIQFETESARQGNAAAIRVKVNSLVDREIIDALYEASQAGVEVRLNVRGLCCLMPGKKGMSENIRVISVVDRFLEHSRIFYFYHGGDEKMFISSADWMGRNLDRRVELLVPIEDRDCKNRLLKILNSYFNDSESATELMSDGSYVPVEPKKKRQIRSQQWLYEEAGQLLKASTNPRTTVFQPHRPG
>NZ_CP042912.1|WP_075086387.1|3145812_3147390_+|HD-domain-containing-protein
MNRDLQYSNVERNAEPKMVAVIDVGASSLRMQIAEIRYDGSIRKLESFSQALSLGKDSFSTGVIARDTIENCVHVLSIYRAKLDEYEITDPDNIRVIATSGVNEASNRLAFLDRIYVATGFEINSFDEAELHRITYRGIQPYIKSAPKYFKGETLAVEVGGGTTEALWLSNGNVAFARAYRLGALRMRQRLELYDAPLAKARELMERQIRDTIVLLKDSVPDTMDSLIAMGGDIRFAASEIKQSTIGNELVDIKLKALERFVNEVLESSPEHIVMRHHMSLPDAQLLGPGLLTVATFARAWGIDKITVANVNLRDGMISEMAKGRMWNPSIGEQILRGATQLGRKYHFNEAHSIHVAKLTSMLFDQLQPLHGMSGRFRGLLQVAAILHQVGSFISNKGSHKHSMYIIENSEFFGIGSEDKRIVALVARYHRRAMPSSRHIGYSSLSRDLRVAVSKMSSILRLAIALNASNTQRIDSIKCKMLPHEIQLVTEDMSDLSLERMELRQAGRLFESIFGKPVVLTSTSI
>NZ_CP042912.1|WP_075086388.1|3144829_3145816_+|ROK-family-protein
MSDQTDDCWIGFDLGGTKMLAVVYDADFKPLGKARKKTKGHDGKAAGLKRINSVIKEAMEDAGVDNSKIKGLGIGCPGPLDLEKKMIRIAPNLGWENAAVGESIEKEFGFPVAVANDVDAGVFGEYMFGAGKGKRCVAGIFPGTGIGGGCVYEGKLIRGANCTCMEIGHIPVMPGGPRDGAGNPGSLEAVASRLSIAGAAALAAYRGDAPHLREDAGTDISDIRSGALKNSVEKGDEAVIQIVHDACDHLALSVVTMVHLMAPDVIVFGGGLIEAMGKIMLPRIEKAARRRILGSLKDVFEIKEAELGDDAGVMGAAALGKQAVTSNS
>NZ_CP042912.1|WP_075086389.1|3143843_3144680_-|hypothetical-protein
MSISKVLSPEEYVEQAYLFKALMERMSADEPIQELLGYLREEILATTKLPMAIDFLLAEVKQLGTMATAMKRIAHYFTPYQSFLIGTAEDDHAQLQMRSALHLLYHDAKLRSEHADRPTMFFHQFESLCRHSLDYDYGLQAIAVDPIYDDTWQRWILGVRHKLGMVDMADLVYIHSEYYLQRKREDDETPDPILFGEKEGRIALANRTKETHYLFLALQRQLGYPPVPLPQKVDPADELIPKLKRMVERLEVRVKFLEDEQRNQGIDLSKFYKKNQKP
>NZ_CP042912.1|WP_075086390.1|3141454_3143818_+|hypothetical-protein
MSFLNELQSGFLRKAICLLALQLSLYGTFGPDYAVAQNATTAGTATAPFPTIENLSIDWPIAGDDNNNGSVAVRYRQSGQTDWTDSAPLRRVPAGSNAGFSWANKHSGSITRVAAGTSYEIELALTDPDGGSATQTISASTRTWPGSSDQATEVVTPATIAAALANVSPGDVLVLADGNYSGINVFANGTLAEPIVVRAQNFGGAVVNGDIRFDGFGFIHIVGLTVEGQIKFNGSNDIVIRDCLIITDRDGIVSFGAGVSDSLIKDNTVIGPTQWNEPALGNSGNNLGEGIVLTGPGNVIAFNRVEGFRDGISLLEDSDAVNQQSIDIYGNDIYRCGDDGIEADFGMGNVRVHHNRVTDCFIALSSQPSLGGPTYFYRNVVYNAVYQAFKPQRSSDGNLWYHNTIVKPGDAFNVITSNGFSRSVSRNNIFIGGPAGTFNGFSNGAGRVLYLPSADATCDFNYDGFGSSGTGSFVGRIGATNFDGLAQMQALTTETDAVELDLSVFEDSVSVPAIPVEEHSPPSFELAAQSSAIDVGVALTGFNDRFTGTAPDLGAYEFGKPIPVYGPGGNLGVEDEVVNRFVFYNESRFDGDDASANAADFDAAASDKQALLPGQTATFANYTSYVKGINGVIFEIPATSDVSRSDFEFRIGNDNNVAKWESAPEPTSVTFTARMGGAPNRVTVVWPNGAIVNTWLEIKILANANTGLSVEDVSYFGNLIGETGDSPTAARTNATDIGRLRNNLSGFFTVGVENAFDIDRSGRVNANDIGIARNNLSGFSSLSLITP
>NZ_CP042912.1|WP_148618825.1|3140920_3141121_-|hypothetical-protein
MNDDFPNDISTSCLITVNGDPLSANFETADDKDWFRFDVEPYQVYQIQTADYRFATGIYDQQGDLL
>NZ_CP042912.1|WP_075086544.1|3156712_3156907_-|hypothetical-protein
MILFSTIAKIWYSLPLIAVVSLCYGATRHEHLREIAIHAIRTCIWVLGFMALIFLVVVLSGYWI
>NZ_CP042912.1|WP_075086382.1|3156921_3157599_-|hypothetical-protein
MPEIVYTPPEGEPVHVNLKDQYWSAFLAWLLPGAGHFYQGRYAKGMLFMVCILSTFLVGLGLGRGRCVYATDSEGKLNYYYIGQFGVGLPALPAVVQSIKTSDGGDPFFELCERFPGDYAATDLRFHKIDRDRDGERESDIPRSRTLKDGLMAPPAGPINENVPDTLAMWHFDYKHMFEMGVLYTFVAGLLNILAIYDAFCGPAIVTAAQREEMDRRKNKKKGSL
>NZ_CP042912.1|WP_075086381.1|3157693_3158413_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MAERFFLSQPVRENKVTLGDDQAHHLVRVMRAKPGDQIVLFDGCGNEYHATIADVSKKSVSLAIDSTEFVADPNDPEIIVACALPKGDRQKFLIEKMVELGCNQFVPLKTSRSVAEASPKVIERIEKQVVEASKQCRRSWLMKVGGQETVESLIGSFADFDGSRLVADPYATRHDLLLQPDACVIAVGPEGGFTDAENQSLRDSDWTPVCFSPNVLRIETAAAAAVAIARQAKFKRSLS
>NZ_CP042912.1|WP_075086380.1|3158425_3160033_+|acyl-CoA-carboxylase-subunit-beta
MSWSERIAELETQSQQIELGGGQKSIDRQHAKGRMTARERIAALLDDPDGFLEIGRWAAWEMYQEWGGSISASVVCGIGKIENRSVMIIANDATIKAGAFFPMTCKKVLRAQRIAMRCHLPLLYLVDSAGVFLPLQDEIFPDEDDFGRIFRNNAVISAMGIPQIAAIMGNCVAGGGYLPVLCDKLVMTEGSGLYLAGPALVKSAIGQEVTSEDLGGAAMHSEISGTIDFREPDDDAAIARVKQLMKALPVDTEAKEYARDSADATSPEKPTANICDDVPFDPQERFDVRDMIRFIIDADSLVEFKADYGQTVVCAYARIGGYRVGIIANQRNVVKSAKEGLQMGGVIYHDSADKEARFIMDCNQTWTPIIFLQDVMGFMVGRDSEQAGIIRAGAKVVNAISNSRVPKITVITGGSYGAGNYAMCGKAFDPRFIFAWPNARYAVMGGKTAAKTILDITIAAMRRAGNEPDAEEMEALREKVESSYDETTDIRHAASRLWVDGIINPEDTRDVLISALEAVTQHADDEPFRTGVLQV
>NZ_CP042912.1|WP_075086379.1|3160156_3160942_+|hypothetical-protein
MRIVAGIFILTFFGSNIYGQEIQDSFSQPLKISNLRRVPPDESGWIRVSGVGEDGRVHNELVPIPGSFAERELELIDEKILVHRMRTSGLSKILTSLSIEDIELFCQPELLDKQRSDLLEIIDSFRSQVADAEPKEVPAIRTKCLLLVSDTLLPDQKQSLARKFSGTRLITPLLTTDYADKMEITADQRNKIIERCKRANEAVKAALAEQQLILERCRDELRSACEDVLTKEQLRKIDVERQLKKMSIDDLDADTEFEVNE
>NZ_CP042912.1|WP_075086378.1|3161156_3161978_+|hypothetical-protein
MKDNRFSILALLLPFLLVGASFAQLQEEVTSGDGTVTRKTVDSNGGIVIEHFAEGTEKFSLPSPSDFRRVEQQEAQEKREKTGSSLAVRRLSDTFTIIDSIVDQRDFLLKHGFIPEQITELEELADNYSSNLENIQVNISDPDSFKSAKTELMVGLFRNVNEVLLPEQISKLNRWNDAKRGLAKILLSTEIGEELGLSEAQRKAIRQKSQQIADEIEEFIAAKKKDAFKVTDGSLTETQKDKLAELISVETFDLYRDSLPLNQLQQQLDFKDQ
>NZ_CP042912.1|WP_084416794.1|3162599_3164090_+|IS21-family-transposase
MEFWTEVRRQVLVEGLSKRGAVKKYKIGWHTLDKILSLEEPPGYQQKQARPKPKIEAFLPIIAEILTADQKAPRKQRHSAKRIFERLRDEHEFTGGYTIVKDAVREWKHSQKEVFLPLTHRPGEAQMDWGFAKVSIRGHTEPVKVAIFVLTLPYSGAVFCQVFHRECTESFQEGHARAFEFFGGVPWRISYDNSKVAIAKILGSRDRKLTREFLRLQSHYLFAEHFCLVRRPNEKGHVERLVEYARGNFLVPVPVVDSLEELNEKLLAQCHADLEKQSRGKSTNKRLLLEEERSAFLGLPARAFEARRITQAAVSSQSLVRFDRNSYSVPTKYAHRKVTVVAAVDEVRFVFGDRLIARHRRCWEKEQFFYQPIHYLRLLERKPGGLDFAKPVDQWQLPKCFGILRRRLEASDEKHGTRFYIRVLRLLERRSLSQLTDAVEYALDIDVIDPSSIRVILEHRQERPAELFSLDGRPQLKTFNVETTDVSAYAALLSAR
>NZ_CP042912.1|WP_075082382.1|3164138_3164933_+|ATP-binding-protein
MTNKRETKATVLVKHHLKQLRLPTMASECDSLAEQAARDNQDHLAYLLKLTERELIERERKSAERRLKAARFPAHKTLDQFDFSAQPTVNKPLVAQLAAGDYLGSRENILLVGPSGTGKSHLAISLAINACSQGKRVRFWRVTELITCLLEAKEERQLLRIRNQLAKLDLLVLDELGYVPASKAGAELLFDVIATAYERNSIIVTTNLPFENWPEVLGNQRLTGAALDRLTHRCHIIETKGESYRLKDAKRRSGKAQKAKKKTA
>NZ_CP042912.1|WP_075084562.1|3165030_3166149_+|hypothetical-protein
MRAKYRPMAAECLGAAEFSELMNMMLGELNASHMGHRGGSDPLPNFDAQNEWSPTTYHLGLRFELGGKGPGLVVESVIPGSPCARARSLVKVGETLLEIDGTAVGPNVDLEKLLTMDEPKEVTLRVRSAAGEERDVAVRPTASVARLLYDEWVEKTRAKVDELSEGKLGYLHIQGMNFRSFRQMEEDLYHAGAGKEGLVIDVRFNGGGSTADHVMTALTQPHHAITQSRGSGEGYPQDRRVYASWTKPIVMLCNEHSFSNAEIVSHAVKQTGRGRVVGMRTAGGVISTGSVRLLDGGSVRMPRRGWYLSSTGEDMELNGCEPDIAIWNDPSWNSPGGEDVQLAKAVEALAEDVETENTKGKVKIKPASKLRK
>NZ_CP042912.1|WP_084417119.1|3166415_3167969_+|glutamine-hydrolyzing-GMP-synthase
MATSTSDQRILVLDFGSQYAQLIARRVREQNVYCEIVRHDITPEQIKSHNPNGLILSGGPNSVYADGAPKCDPGIFEMGIPVLAICYGMQLLCESLGGKVESTPTREYGRATLKVIESDDIFEGFPAEDQVWMSHGDQVHQVSDDFIGLAKTETCPLAAVRHKSLPVYGLQFHPEVTHTPNGSVLLRNFLYKTCGCTGTWKLTDFADEMIASIRERVGDDRVICGLSGGVDSSVVAALLYKAIGPQLSCILVDNGLLRKNEADIVVEQFTNHFKTDLHVVDGKDRFLETLKGITEPQEKRRRIGHMFIDCFKSESESIDGVKFLAQGTLYPDVIESGAAPDGPAATIKLHHNVGGLPEELGFELIEPLRDLFKDEVRRLGIELGLPEHLVWRHPFPGPGLAVRCLGEVAEPKLKVLREADAIVIEEIMAAGLYRETSQLFAVLLPVQSVGVMGDARTYDNALVIRCVNTDDFMTADWTHLPYEVLGKMSTRIINEVNGINRVCYDISSKPPATIEWE

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Crispr_ID: NZ_CP042912_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_10

5242794-5242891

Orphan

Consensus_repeat	Method
GGTGGCACAGGCTTCCAGCCTGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042912_10

>merge|NZ_CP042912|10|5242794-5242891|CRISPRCasFinder
GGTGGCACAGGCTTCCAGCCTGTGGACGCGCTGGCAGGTGGCATAGGCTTCCAGCCTGTGATTGCGCTGGTTCAGGTGGCATAGGCTTCCAGCCTGTG

>NZ_CP042912|10|6|5242794-5242891|CRISPRCasFinder
GGTGGCACAGGCTTCCAGCCTGTG	GACGCGCTGGCAGGTGGCATAGGCTTCCAGCCTGTGATTGCGCTGGTTCA
GGTGGCATAGGCTTCCAGCCTGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075083525.1\|5246272_5251297_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NZ_CP042912.1\|WP_075083527.1\|5252951_5254235_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP042912.1\|WP_075083521.1\|5240500_5241280_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP042912.1\|WP_075083524.1\|5245053_5245989_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP042912.1\|WP_075083513.1\|5233440_5235207_+\|Na(+)/H(+)-antiporter-subunit-D	unknown	unknown	gnl\|CDD\|237168
NZ_CP042912.1\|WP_075083530.1\|5255477_5257313_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293772
NZ_CP042912.1\|WP_075083514.1\|5235562_5236543_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_087149619.1\|5243038_5243353_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130981
NZ_CP042912.1\|WP_148618998.1\|5254260_5254944_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075083588.1\|5233244_5233448_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_084416967.1\|5243682_5244981_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075083526.1\|5251641_5252955_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227245
NZ_CP042912.1\|WP_075083522.1\|5241393_5242761_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|178182
NZ_CP042912.1\|WP_075083519.1\|5238929_5239385_-\|DNA-mismatch-endonuclease-Vsr	unknown	unknown	gnl\|CDD\|226250
NZ_CP042912.1\|WP_075083523.1\|5243413_5243659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130981
NZ_CP042912.1\|WP_075083515.1\|5236630_5237197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075083531.1\|5257575_5259102_+\|arylsulfatase	unknown	unknown	gnl\|CDD\|293762
NZ_CP042912.1\|WP_075083516.1\|5237324_5238263_+\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273463
NZ_CP042912.1\|WP_075083520.1\|5239445_5240342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075083511.1\|5231479_5232970_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|236251

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075083525.1\|5246272_5251297_-\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	2.09604e-76
NZ_CP042912.1\|WP_075083527.1\|5252951_5254235_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	4.87919e-34
NZ_CP042912.1\|WP_075083521.1\|5240500_5241280_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	5.35841e-21
NZ_CP042912.1\|WP_075083524.1\|5245053_5245989_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	4.65226e-21
NZ_CP042912.1\|WP_075083513.1\|5233440_5235207_+\|Na(+)/H(+)-antiporter-subunit-D	gnl\|CDD\|237168	PRK12668, PRK12668, Na(+)/H(+) antiporter subunit D.	0
NZ_CP042912.1\|WP_075083530.1\|5255477_5257313_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293772	cd16153, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	1.10874e-69
NZ_CP042912.1\|WP_087149619.1\|5243038_5243353_-\|hypothetical-protein	gnl\|CDD\|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	5.47305e-14
NZ_CP042912.1\|WP_075083531.1\|5257575_5259102_+\|arylsulfatase	gnl\|CDD\|293762	cd16143, ARS_like, uncharacterized arylsulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	2.16648e-153
NZ_CP042912.1\|WP_075083526.1\|5251641_5252955_-\|hypothetical-protein	gnl\|CDD\|227245	COG4908, COG4908, Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only].	0.000123933
NZ_CP042912.1\|WP_075083522.1\|5241393_5242761_+\|threonine-synthase	gnl\|CDD\|178182	PLN02569, PLN02569, threonine synthase.	0
NZ_CP042912.1\|WP_075083519.1\|5238929_5239385_-\|DNA-mismatch-endonuclease-Vsr	gnl\|CDD\|226250	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair].	3.19631e-56
NZ_CP042912.1\|WP_075083523.1\|5243413_5243659_-\|hypothetical-protein	gnl\|CDD\|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	3.24595e-09
NZ_CP042912.1\|WP_075083516.1\|5237324_5238263_+\|cysteine-synthase-A	gnl\|CDD\|273463	TIGR01136, Cysteine_synthase, cysteine synthase. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff. [Amino acid biosynthesis, Serine family].	1.20548e-161
NZ_CP042912.1\|WP_075083511.1\|5231479_5232970_+\|cation:proton-antiporter	gnl\|CDD\|236251	PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed.	4.95792e-114

>NZ_CP042912.1|WP_075083522.1|5241393_5242761_+|threonine-synthase
MSTLTTEPSSSATDAQTYFRCFAGCEGKHSIYDVIYTCPTCGSLLEVYHEREPLKARNPYQWQQLVDSRASTTKWPYGSGVWAMREWVVPSLRDENIVSMCEGNTNLFWAERLGRQLGVPDLWIKLCGNSHTGSFKDLGMTVLVSVVKQMMSMEGNPVKAVACASTGDTSAALAAYAAYAGIPAVIFLPAGKVSTAQLIQPVSNGAHVLALDTDFDGCMKIVQEVTNDQSIYLANSMNSLRIEGQKTVGIEIVKQFDWEVPDWIIIPVGNLGNISALHKGFKLMMDLGLINKMPRLVAAQAAKADPFYQSYKNGFKDKISVTAGETLANAIRIGDPVSYHKAVKAVQETDGVVEQATEAELAEAAAEADLTGMYCCPHTGVALAVLKKLVKSGQIKSNERAIVISTAHGLKFTDFKVRYHESKLDDIKSELANPPAYVSADANAVKDEIAKRLGL
>NZ_CP042912.1|WP_075083521.1|5240500_5241280_-|class-I-SAM-dependent-methyltransferase
MAQSDPAKHNRKAWDSLVSKGNRWTVPVTGEQIAAAKAGDWKIVLTPEKPVPDDWLKPVAGKKILCLAGGGGQQAPILAAAGAEVTTLDNSPSQLEQDRLVASREGLAIETVLGDMRDLSAFENESFDVIVNPCSNSFVPDVNPVWKECHRVLKPGGSLMVGFINPLTHIFDYEKMEAGDLEVRHKIPYSDYDLPEAERQALIDQDEPLWFGHSLEDQIGGQIEAGFVITGFYEDRWPELAALSDRINLLIATRALKVA
>NZ_CP042912.1|WP_075083520.1|5239445_5240342_-|hypothetical-protein
MQTGATETKLTQSQWQRLADDYANEVSQWTVPFRQRRRKGKSHPVDDFLFVYYRYSSGQLEHWHPGANVRLECPGGVPNHFSDRHYRKESEIVFADPTLMDEKSFQRLRWTAELLRQTESRKGNFSCLGLHEWAMVYRGHEVRHEKTTPLRLPQAEIDAIVESRPLTCTHFDAFRFYAIDAKPLNRIEPTLESRPDLEQPGCIHANMDLYKWAFKAMPWIGSEFLLRCFRLALFAREIDMRASPYDLSSYGDYEPILIETAQGRAQYEQAQREVADRAAPLRSELADRIESLVALANR
>NZ_CP042912.1|WP_075083519.1|5238929_5239385_-|DNA-mismatch-endonuclease-Vsr
MTDIVDAKTRSRMMSGIGTANTKPEVIVRKLLFAHGFRYRLHRKDLPGKPDIVLPKYEVAVFVHGCFWHCHECHLFKWPKSNAAFWRKKILGNRERDARNVQELRKLGWHVMTVWECAVRSRSEKQLNSLANRMSNWIEADSSRRRSKNFP
>NZ_CP042912.1|WP_075083516.1|5237324_5238263_+|cysteine-synthase-A
MPRGQTFENAVAAIGNTPMIQINRLIPAEHGTVFAKCEFFQPLNSVKDRLGAAMINAGEADGTIKPDTHVVEPTSGNTGIALAFVCAAKGYKLTLTMPESMSVERRALLKAMGANLVLTPASEGIPGAIRKAEEIVAGDAKAWMPQQFENPANPAIHEATTGPEIWEDSAHNIDAIVAGVGTGGTITGVARFIKKLNPDFKAFAVEPAGSPVIGGGSPGPHKIQGIGAGFVPKNLDTSLLDGTITVENEEAFEWGRRLAKEEGIVAGISSGANMCAAAQIAARPEFHGKRIVTIACSLGERYLSTPLFEDQA
>NZ_CP042912.1|WP_075083515.1|5236630_5237197_-|hypothetical-protein
MSDTPNPFKTPENAADVHAEPEATNYDLRGMLILIAVSVALVAFETFVNGLSVTLVFVPPILFFAVAFWSVFAGMRATNKSQGLRIGLSLLAGIVAVPCCQCLLMFTCIPATTAIGSGFDLHNGVTSEMGFTAVSSLLLAGIALLALFLVYLLPQSLRRSNKAAVEYKSQRVSDKSVSGKNVSENPIE
>NZ_CP042912.1|WP_075083514.1|5235562_5236543_+|hypothetical-protein
MFSANRTQIAVTLCCLLTTTVCSAQDKSIEFDVPAVVGAREILPSPFEETKIIEVILPVSTAIAPKLRGNVNEFRFDVSWNQGVYPIFDYGPRTQTATAIKGLLTVEKNESQSFGIDSSLTGTPVDLASINLSSDLGSSNSERKSYQEIPQHDVLVASGTIDRGTGAFFRFHPSKTQTLEGSHDLILAFRVPKEWRNGMLKVECRGIGKRKVIGLWSEPFEVSRSFVAPLYLESNSTSHDLAIGYARAEQEFRKSWQVFEKELRDIRNYIPPRVPLCRQPAIQEMPHLLIQSGDDKHLSHFEGYLTDEVAIAAGKFVQARNSLKAN
>NZ_CP042912.1|WP_075083513.1|5233440_5235207_+|Na(+)/H(+)-antiporter-subunit-D
MDSLRNLPPGTIMMLGALLLPFLAKLGNKLPAIGALVLSVVSLLLFWFTPDGSYGNVEFFGNTLNMVRIDSLSRIFGVIFHLAAIMASIYALHLEDTKQHIAAMIYAGGAIAAACAGDLVTLFVFWELTAVSSVVLVWAGEGKGAYKSGMRYLIIQVISGVLLLSGAILEYSQDGSLMFEAFGDGGSLWDLSPGAQLILLAFGIKAAFPLLHNWLQDAYPQASVTGTVFLSAFTTKLAIYALARGFAGTDELIYIGCAMTLFPIVFAVIENDLRRVLAYSLNNQLGFMVVGIGIGTELAINGAAAHAFCHIIYKALLFMSMGAVLYRVGTTKATELGGLHKSMPWTTGFCLIGAGSISGFPLLSGFVSKSMIITAAGEEHMFWVWIVLLIASAGVMEHSGIKIPFFAFFAHDSGKRVKEAPLNMLIAMGMAAALCIGAGVFYWYLYDLLPSEPVTHHVDHEGHSHAEPYKPYTAPHVVMQLQLLMFAVLAFVFLMQTKLYPAEKRSTNLDTDWIYRRFIPTGLEGIGKVYHKLDAAWRSLAVAGIGGAIATMGKFFNERGVFGRPWATSTMAFWAAVLLGGFLLIYFT
>NZ_CP042912.1|WP_075083588.1|5233244_5233448_+|hypothetical-protein
MIIGLIVVCIGLLLAEFTFENDHAHFPKYENIFGFQAMFGFVAFVVIVFLGMGLRLIIERDEDYYDG
>NZ_CP042912.1|WP_075083511.1|5231479_5232970_+|cation:proton-antiporter
MTPENMILIAMGIPLLAVAWVAIFGKLPDVRETGSIAAAVATFTVCCLLASHVFAGARPTVLIGEMMPGFSISFTVEPLGMAFALIASGLWILTTIYAIGYMRGHHEINQTRFFCCFAIAIFAALAAAFSGNLFTLFVAYEVMTISTYPLVTHHGDEKARAGGRVYLGILLSTSVAFFMLAIVWTWHLAGTLDFTPGGILSLPYRGRQIETLGLAVLLGLFAYGIGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKVGVFSVLKIVVYIFGFDLVRESGISEWLCYVAGASILIGSLVAMTKDNLKARLAYSTISQLAYITLGAALATQASIIGSGMHIAMHAVGKITLFFCAGAIYVGAHKSNISDMRGLGRAMPFTFGAFLLASISIIGLPPGGGAWSKWFLAVGTADRGMYFLLATLMISSLLNIAYLVPIPIQAFMTPKGEEPQKFHEAPMMCVVPLCMTAVGSVLLFFFAQPIYDVLLPITEVVTEVTP
>NZ_CP042912.1|WP_087149619.1|5243038_5243353_-|hypothetical-protein
MIWDYRACDDSELDAVDRALCDYAVKLTLTPGQMDATDVGKLKALGLIDSQITVVVQVIGYFNYINRVADGLDVEPEGWMSRIEKRKWLAEKAKFSAGGEIEAG
>NZ_CP042912.1|WP_075083523.1|5243413_5243659_-|hypothetical-protein
MPFIEQIEPENATGRLARIYASAMKRAGYVAGIIKVMSQDPQSCEGSMGFYGALMKGKNELSTTRREMLAAVVSNVNDCFY
>NZ_CP042912.1|WP_084416967.1|5243682_5244981_-|hypothetical-protein
MKSLRHSLIFAISTAGFCLAVALVGLCSSAKAQQTEVVVAETIIAPYLTTGKLADGEAKLRAALLKSPEDDQLLMELGFVQFFQSVEKMGQTLYRFGPGRSFAMGQIPFLRLPVPDNPDPEPVSLDDVREMIQDFINDLEEVDKTLAKIDSDDVKLPLRVMQIKLDFDGDGVAGANENLGPALMQYLGGRRDPERVKDLMDKSIHFDRADVDWLRGYSCLLRSLGEIFLAYDQTEFWEVVSHRMFEKGETKFDFLTEEADVDGDDRDFYMEIADIIAAIHNIRFPVKEPERLKVAHQHLLNTIGHSRQMWKRINAETDDDQEWIPSPNQSNPFAAVRITRNMTDSWEKFLVEGEQILNGELLIPFWRGTNKKRGIDLHRVFHEPEDFDLVLWIHGSGAVPFVKMGKCSEPETWAEFQRVFRGNFFGFAVWFN
>NZ_CP042912.1|WP_075083524.1|5245053_5245989_-|alpha/beta-hydrolase
MNALLFRSPLVPACLCLLAIIVGNHGYAQEAKQHTTIELWPDGLPADAKPLTEKQIEEAKSKTTDERIFHVESPMLTIYEPPAEKKNGTAVVICPGGGYYMLAYKHEGIDLAKWFNEQGVTAFLLKYRVPRRQEKIHWEPMQDVQRAIRIVRSRADQYKIDSDRIGVLGFSAGGHLTVMAGTQFETQSYDPVDDADKLSCRPNFICPIYAAYLGNDYKDDVVELGDLVNVTENTPPTFMAVTADDNMRGAQAGLLLARLLQNGVKAEVHVWQEGGHGYGLYKRGKATDGWEENLKVWLELNGFLNSPTKDE
>NZ_CP042912.1|WP_075083525.1|5246272_5251297_-|PAS-domain-S-box-protein
MHSTDRDSSESFDGQASAEPQGNQHLIELCTSNRDASTVRQFCQQILKVGSESVVIIPPASQRDPARWLQGDSALQVTPVKNRMLIEPGRIYVVPPRRRVAIASGSFRVSVVKRDAAGEDLVEPIFKSLADMFQSSAVGVSFANEDAFVENGLSAIREVGGLALVCHAGQAPAELASQVLEFLRKQVPFGKSAQTAALESGPATPAVGALLTGGQHQRVAEDLDNLIRSTQTATIFLDNNLLIRSFTPAVTAIYPLQPNDIGRSLESIESRAHFMPPIPRPTDVSESEPEQLTIGTHDERYFVRKALPYRTNQGLLDGLVITFTDVTEFRRKEAGYRQADRQFRSITNTVPAAIAYIDINRRCQFANQKFCDWIGQPSSQIVGSLADGLMTGPFAELADCLDAALRGDRQQYEMAMPRDPEEGIRFASVTFTPDVNDQSELVGTCVLATDITELKRSNYRRKHREKRMSAILAATAEGIYGIDVDGKCTFANQAAARILGYDCPSDFIGHSMHELIHHTKVDGQPYPEHECLINQAYLRGEQVHVDTEVFWRADGASLEVEYWSYPKMIDDEILGCVVTFRDISQRRIWEREIAEQHAGLRRVIDNMLNFVGVLDPSGIMLEVNQTALNAGGLSREDVIGKPFWDCYWWSYSSRVAARLKKAVAKATGGETVRYDETVRMKNDQPMDIDFMMIPVRNDQGSITHLIPSGVDISDRKRAERKARQRERHLSLALEAGQMGTWVWDIAANRISWSDRLYEIYGFEKGEFAETPDAFLELTLPEDRPVVEEVIDSILNSDSKREDYEIRARRGTDGEIIWTKIDGVVDRDQEGNAVRVTGIASDITSRKRGEISLAFFADLVSSINDLHTPDEIIRAACSQIRKFLGLAHCLLVDIDDRAEIANVFHDEHAEHHPNIEGLYEMADFWSVEERHELREGGILVVDDTALMRDSELAASFAELDIHSLVVVGCTQEQRLTFILAAQKDERYSWRQDEIELLREIGDMLYLRIERTRAEQALRSSEEHLRRVINNQLGLVGVIGSDGLLLEVDDRSMNIAGLEREDVIGKHFAECAWWTYDDAVANRIREAMDRAFAGEKVRFDIGLFSKDGKPLMIDFMIAPVHDASGEISYLIPSGVDISDRKAAEQKLADNELRLKMAMKAAGLAAWEWTPEASFWTDELYDMIGADRNQTPSPELFFKNVHPDDVAILKDAWHRSTRRGAPYDSEFRIVRPDGQVRWIYGVGEVVRDENGEILRIFGLNWDNTAERLAAEALRESERRAQQANESKSEFLANMSHEIRTPMSAIIGYADILSGHLNDPDDLNCVSIIRNNGNFLLDIINDILDISKIEAGKLELGRKIFRLDRLLSDVQSLMLVRATEKRLAFEVSIANEIPRKIRSDSKRLKQILVNLLGNAIKFTESGSVQLSVRSERQPDETQCRTYFDVIDTGIGIESEHLTRLFDPFMQGDASVGRKFGGTGLGLAISQRLARNLDGEISVTSEPGGGSQFTLMIQSEIAKGSGFVSQSDWDQPDKAVSRRGLSPTKQTGIDGRILVVDDRREIRFIAQHFIEDAGGTVVTAENGQEAIDAVEAAEQAGQPFDLVVIDMQMPVVDGYEATRRLRASGFDKPVIALTAHAMEGDREVCLEAGCTDYLSKPLDGPLFVQKLVNYLDRDQSPNQ
>NZ_CP042912.1|WP_075083526.1|5251641_5252955_-|hypothetical-protein
MSDQQSFPLSAFEELFLYRDHPDAPSSFFVKFQLNSHLDRAKAQQSIDKVCEHHVLASSRIEVGSNGKSRWVHCPRRIEIQWFENEFEEAGYPQPWFDPEKERPLRVHCYSRPDSSSTMLFHVHHVAFDGLGFLQLFQDWWRIYCGKEPAGDYDQNQLLRRCRPSVSVLQAVKLLPGQWKSVRATVQVLGRKVIPLLGKPIDSAGLDPVPAKVITRCFDRQTSADLRKCARDNRVSTNSLLARNLYVAIDEYQTRHRMEAKGSHLRLAIPFNERNSSSNRLSACNHCTVISFDRSRDEVANPATLLHSVDQEVRVVQRWRLSLNFWRVLGLFRRLPGGIARFGSPQNVTATTLFSNLGRLDRGFEFFDCQNVDGVAVTEVEVVPTMHRGMPIAIVVYEYSGQVRFSMQYDPRSIAQADAERFVDAFFDTTRRLLPSA
>NZ_CP042912.1|WP_075083527.1|5252951_5254235_-|FAD-binding-oxidoreductase
MPCSEPTLEHNSWLDGVGTLPTFSKVEQDQSVDWLIVGAGFTGVAAARRIAIAKPDDRVLIVDAGEVLDGSSSRSSGFVVPIGHFYHPRLPENEKLYRLGSDGIRQLRELVEHHRIDCDWNNAGRLIGARAAPGMKSLNRIARSLEALGSPIVRLSGEQVREHTSMATYHAAIRQTESVMVNPAKLLRGLIETLPPNVTLMTNSAVTAVLPNGNAIVDGGIVIESGQMILSVNAFANQFGIGKHRVFPMRTFVSEVEFPTSGQENPAWGITSSERVGSSIRRVGNRLFIRNTAEFGTRSADPKAELKRVASFQLRTLQSRFSGVADVSKMQVANTWSGPISITANGGSLFGQSSDNVYFATGYNGHGIAHGTTSGRLLAELAMGHRSELLALIQSLKKPNWIPGGAILKSGVDAYVRLLRWRFGAEE
>NZ_CP042912.1|WP_148618998.1|5254260_5254944_-|hypothetical-protein
MSTSSSERSKRRSGHPHRSCNSHRLVVLEGSSRTSYLKRTEEQLDIAFPTHYVDRADVLAVLDEDDQLCGGVMLVGSGPFRSIAGIPDQHRGAHQSLNERGDVAEINGLWLAPKMKSPFLSILFWRLLIGHLVKSKKNSFLFTFDNSNTRMKSLAFWLKPTKLYSGATLTLPGMKYSSEETIALINIEPVKVFLTLLERKAAKSSGRRNGNVVGPANHSSQSAASSF
>NZ_CP042912.1|WP_075083530.1|5255477_5257313_+|sulfatase-like-hydrolase/transferase
MPKFAFFVLLVLVSDLVSGATQVLAEQPNVLWIVTDDQRYDSVQEFNRILHDRDHSALGHVESPNVDRLAKMGTTFINTYCQAPGCAPSRASMHYGRYPFRSGVYEFEYHNNTVEHCRPTLPEEMAAIGYQTVQIGKLGVRIKTLNRNGKPVKHPIYQTEISSKFLAKQGLSDRGKDWFFELDGEKLETPLKSVEYFITPDGEFEMTSPQIEVFEKYKGQSKRIDEKYDLLRHYNKKKPGLPGAGIAITGVSSRKAGKTRDGYYASVFGDFLESADQPLQIGSESFTGVDTSKPLFCHIGFDFPHTPVNPPKSFRDRFQQFDYKIPEFDEAELKTMARQMKKQVTSGYSDHLTDEEKQKMTQDYYAFCAYGDSLVGQSVDSFVQYSEKHNQPWMVVYVCGDHGWKLNEHGSISKFSPWDVDCHNPIIVVSSDKQIFPSGKVVTDFTEFVDIAPTILAAGGAELDNEKFQHLDGQNLAKVVSGEAPVRDYVIGECHAVTGPRAYIRTKDYVFSCQTRPDKRRGRNLQWAMEAKYEEIDPALYQTGTDPGEVNNLAFNEDHKQTALVLKDKLLSIVLGDDRVEVDWGSKGGGTEIFRSNNSPDADDKKLDLSN
>NZ_CP042912.1|WP_075083531.1|5257575_5259102_+|arylsulfatase
MNRLIAVLLVLAFLGNVTFADELSQKPNIVLVLADDLGLGDVSFHTRHVQKKEPLFETPTLDDLAAKSLWFTDGHSATALCAPTRYAVMSGNNNYRSYQPWGVWSTFAKTAFVKGHATLGTVVRDAGYRTGFVGKWHLGGDFNVPGSDQVFRGKKNGDLRGKVDMTKMIGGGPKFCGFDYDFTTPCGIQGPHYLVYENQVWAPINNVSKIIFMNKDTAKNPGDLASKGEGMGDSQWDTRQLGKILSAKAVDFIEESAAQEEPFFLYYCSPMVHRPHVPPKEFDGKPIKGQTPSSHLDMVLDFDMQMKRIVDALKATGEFENTLFVLTSDNGGLQDGPARKVGYQVGGGFNGSKNSPLEGGHRIPCFAMWPGKIEPGICDELVVNQDMIATFAALVGTEIPEGQAQDSNNLLPLLTGDGKFRPRSSWINQAGSKNEVMIRKMPWKLIIQSNNKRSRFEPIALYNLQSDPGEKQNQLKVDAHQNVVATLLAEYLETVNSGQPTAPSRMND

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Crispr_ID: NZ_CP042912_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042912_11

6511616-6513943

TypeI

Consensus_repeat	Method
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CRISPRCasFinder
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CRT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	PILER-CR

35 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP042912_11

>merge|NZ_CP042912|11|6511616-6513943|CRISPRCasFinder,CRT,PILER-CR
GTTTCAATCCACGCGTCCGTGAGGACGCGACAGGGGGAAAGAAAGTACGTCAGCGGCGGACGGGTGTTTCAATCCACGCGTCCGTGAGGACGCGACCGGCTCGAATGCATCGAACCGATAATCAGACGGCTGTTTCAATCCACGCGTCCGTGAGGACGCGACAGCCTGCGGAGCCACAAAGCTACAATGAATGGCTTGTTTCAATCCACGCGTCCGTGAGGACGCGACTAGTGGCTATGACCGTGGGTTCTTCCCGGACGAGGTTTCAATCCACGCGTCCGTGAGGACGCGACGCAATGAGTAGGTTTGGTTACGCGATCGAACATGTTTCAATCCACGCGTCCGTGAGGACGCGACTTTGTTGATATCACCAGCAACAAAAGAGACGACAGTTTCAATCCACGCGTCCGTGAGGACGCGACTACAGATAGAGCGTTGAACCGTCGAGCAAGAATGTTTCAATCCACGCGTCCGTGAGGACGCGACGGGGCCGAGCCTCGAAATATGCCGTCTATCGCCGGTTTCAATCCACGCGTCCGTGAGGACGCGACGGTAAGCGAGGGCACGAAAACGCTGTACCGGGGGTTTCAATCCACGCGTCCGTGAGGACGCGACCACACTGCCATCAGCGCCAGCGATAGGCAACCGAGTGTTTCAATCCACGCGTCCGTGAGGACGCGACGTCAAACGCGCTTCCCCTTGCTTCTGAATTTCGAGTTTCAATCCACGCGTCCGTGAGGACGCGACACTTGATGGCACGCCGATCACTCCGTCTGGCGTGTTTCAATCCACGCGTCCGTGAGGACGCGACGTCCCTTGTAACTTGTTACACGTCTCTATCTGTCAAGTTTCAATCCACGCGTCCGTGAGGACGCGACTGATGTACTCAAACTGGATTGCACGCGACGGTGCGTTTCAATCCACGCGTCCGTGAGGACGCGACCATTTCAACCCTCGTACTTCTTCATTTTTGAATAGAGTTTCAATCCACGCGTCCGTGAGGACGCGACAATCAGTCCAATCAGTTTGCCAGCGACATAAGGGAAGTTTCAATCCACGCGTCCGTGAGGACGCGACCTGGATTGCCCGCGACGGCGCGAACTTCGTTCCTGTTTCAATCCACGCGTCCGTGAGGACGCGACTGTATGATCACCAGCAATATTACAAACAGAATCACGGTTTCAATCCACGCGTCCGTGAGGACGCGACCGGCCAATCCCTCAATCGCTGCTGCCAATGCCTCAAGTTTCAATCCACGCGTCCGTGAGGACGCGACGATGTTTTTCGGGCTGTGGCAAGTAGCAGTTAAACCGGTTTCAATCCACGCGTCCGTGAGGACGCGACCACTCAAAAACGATCCTCTGGATTTGGAGATTGTGTTTCAATCCACGCGTCCGTGAGGACGCGACGGGATTCTTCACGGATGACCAGTGTGAGGTCCCGAAGTTTCAATCCACGCGTCCGTGAGGACGCGACTATCGGGTGGGGCGTCACTGGCAAAGAGATTGTGTTTCAATCCACGCGTCCGTGAGGACGCGACTTTGGCTTGACGTGGATCGGGTCCGAACGACTGAGTTTCAATCCACGCGTCCGTGAGGACGCGACAATCAGTCCAATCAGTTTGCCAGCGATGTACGGGAAGTTTCAATCCACGCGTCCGTGAGGACGCGACAAAAGGAAATGACAAGCAGACTTGATGCCCTGTTGTTTCAATCCACGCGTCCGTGAGGACGCGACCTTTGGCCGTTTGCGACCGACGCCAGCAAGAGCAGTTTCAATCCACGCGTCCGTGAGGACGCGACCAGGCGATAGCTGTTTGGTTGGCATGTTCCAGTTTGTTTCAATCCACGCGTCCGTGAGGACGCGACCCCAAACGTCAACGTGCTCAAGTGGCTTGCCAATGTTTCAATCCACGCGTCCGTGAGGACGCGACGACCAACTGAACAAAAATCCACTCACCAAAGTCTGTTTCAATCCACGCGTCCGTGAGGACGCGACTCCCGCCAACTTGCGTTACGTTGACATCAAAGACATGTTTCAATCCACGCGTCCGTGAGGACGCGACTTATTGCTGAGTCAAACAGGGACAGGCTCAACGGTTTCAATCCACGCGTCCGTGAGGACGCGACATTAAGCGCCGTAGCTGCCGACGCACCGGAAGACGTTTCAATCCACGCGTCCGTGAGGACGCGACAGTACGCCAACCGGACGACAACATCCGAAAGCTCGCGTTTCAATCCACGCGTCCGTGAGGACGCGACGTTCCAAACTGCGTCGTGATTGACAGCGTTAGCGTTGTTTCAATCCACGCGTCCGTGAGGACGCGAC

>NZ_CP042912|11|7|6511616-6513943|CRISPRCasFinder
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGGGGGAAAGAAAGTACGTCAGCGGCGGACGGGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CGGCTCGAATGCATCGAACCGATAATCAGACGGCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGCCTGCGGAGCCACAAAGCTACAATGAATGGCTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TAGTGGCTATGACCGTGGGTTCTTCCCGGACGAG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GCAATGAGTAGGTTTGGTTACGCGATCGAACAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTTGTTGATATCACCAGCAACAAAAGAGACGACA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TACAGATAGAGCGTTGAACCGTCGAGCAAGAAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGGGCCGAGCCTCGAAATATGCCGTCTATCGCCG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGTAAGCGAGGGCACGAAAACGCTGTACCGGGG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CACACTGCCATCAGCGCCAGCGATAGGCAACCGAGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTCAAACGCGCTTCCCCTTGCTTCTGAATTTCGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	ACTTGATGGCACGCCGATCACTCCGTCTGGCGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTCCCTTGTAACTTGTTACACGTCTCTATCTGTCAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TGATGTACTCAAACTGGATTGCACGCGACGGTGC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CATTTCAACCCTCGTACTTCTTCATTTTTGAATAGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AATCAGTCCAATCAGTTTGCCAGCGACATAAGGGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CTGGATTGCCCGCGACGGCGCGAACTTCGTTCCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TGTATGATCACCAGCAATATTACAAACAGAATCACG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CGGCCAATCCCTCAATCGCTGCTGCCAATGCCTCAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GATGTTTTTCGGGCTGTGGCAAGTAGCAGTTAAACCG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CACTCAAAAACGATCCTCTGGATTTGGAGATTGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGGATTCTTCACGGATGACCAGTGTGAGGTCCCGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TATCGGGTGGGGCGTCACTGGCAAAGAGATTGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTTGGCTTGACGTGGATCGGGTCCGAACGACTGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AATCAGTCCAATCAGTTTGCCAGCGATGTACGGGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AAAAGGAAATGACAAGCAGACTTGATGCCCTGTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CTTTGGCCGTTTGCGACCGACGCCAGCAAGAGCA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CAGGCGATAGCTGTTTGGTTGGCATGTTCCAGTTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CCCAAACGTCAACGTGCTCAAGTGGCTTGCCAAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GACCAACTGAACAAAAATCCACTCACCAAAGTCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TCCCGCCAACTTGCGTTACGTTGACATCAAAGACAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTATTGCTGAGTCAAACAGGGACAGGCTCAACG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	ATTAAGCGCCGTAGCTGCCGACGCACCGGAAGAC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGTACGCCAACCGGACGACAACATCCGAAAGCTCGC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTTCCAAACTGCGTCGTGATTGACAGCGTTAGCGTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC

>NZ_CP042912|11|3|6511616-6513943|CRT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGGGGGAAAGAAAGTACGTCAGCGGCGGACGGGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CGGCTCGAATGCATCGAACCGATAATCAGACGGCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGCCTGCGGAGCCACAAAGCTACAATGAATGGCTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TAGTGGCTATGACCGTGGGTTCTTCCCGGACGAG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GCAATGAGTAGGTTTGGTTACGCGATCGAACAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTTGTTGATATCACCAGCAACAAAAGAGACGACA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TACAGATAGAGCGTTGAACCGTCGAGCAAGAAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGGGCCGAGCCTCGAAATATGCCGTCTATCGCCG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGTAAGCGAGGGCACGAAAACGCTGTACCGGGG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CACACTGCCATCAGCGCCAGCGATAGGCAACCGAGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTCAAACGCGCTTCCCCTTGCTTCTGAATTTCGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	ACTTGATGGCACGCCGATCACTCCGTCTGGCGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTCCCTTGTAACTTGTTACACGTCTCTATCTGTCAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TGATGTACTCAAACTGGATTGCACGCGACGGTGC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CATTTCAACCCTCGTACTTCTTCATTTTTGAATAGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AATCAGTCCAATCAGTTTGCCAGCGACATAAGGGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CTGGATTGCCCGCGACGGCGCGAACTTCGTTCCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TGTATGATCACCAGCAATATTACAAACAGAATCACG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CGGCCAATCCCTCAATCGCTGCTGCCAATGCCTCAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GATGTTTTTCGGGCTGTGGCAAGTAGCAGTTAAACCG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CACTCAAAAACGATCCTCTGGATTTGGAGATTGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGGATTCTTCACGGATGACCAGTGTGAGGTCCCGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TATCGGGTGGGGCGTCACTGGCAAAGAGATTGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTTGGCTTGACGTGGATCGGGTCCGAACGACTGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AATCAGTCCAATCAGTTTGCCAGCGATGTACGGGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AAAAGGAAATGACAAGCAGACTTGATGCCCTGTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CTTTGGCCGTTTGCGACCGACGCCAGCAAGAGCA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CAGGCGATAGCTGTTTGGTTGGCATGTTCCAGTTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CCCAAACGTCAACGTGCTCAAGTGGCTTGCCAAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GACCAACTGAACAAAAATCCACTCACCAAAGTCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TCCCGCCAACTTGCGTTACGTTGACATCAAAGACAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTATTGCTGAGTCAAACAGGGACAGGCTCAACG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	ATTAAGCGCCGTAGCTGCCGACGCACCGGAAGAC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGTACGCCAACCGGACGACAACATCCGAAAGCTCGC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTTCCAAACTGCGTCGTGATTGACAGCGTTAGCGTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC

>NZ_CP042912|11|3|6511681-6513943|PILER-CR
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CGGCTCGAATGCATCGAACCGATAATCAGACGGCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGCCTGCGGAGCCACAAAGCTACAATGAATGGCTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TAGTGGCTATGACCGTGGGTTCTTCCCGGACGAG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GCAATGAGTAGGTTTGGTTACGCGATCGAACAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTTGTTGATATCACCAGCAACAAAAGAGACGACA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TACAGATAGAGCGTTGAACCGTCGAGCAAGAAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGGGCCGAGCCTCGAAATATGCCGTCTATCGCCG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGTAAGCGAGGGCACGAAAACGCTGTACCGGGG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CACACTGCCATCAGCGCCAGCGATAGGCAACCGAGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTCAAACGCGCTTCCCCTTGCTTCTGAATTTCGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	ACTTGATGGCACGCCGATCACTCCGTCTGGCGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTCCCTTGTAACTTGTTACACGTCTCTATCTGTCAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TGATGTACTCAAACTGGATTGCACGCGACGGTGC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CATTTCAACCCTCGTACTTCTTCATTTTTGAATAGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AATCAGTCCAATCAGTTTGCCAGCGACATAAGGGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CTGGATTGCCCGCGACGGCGCGAACTTCGTTCCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TGTATGATCACCAGCAATATTACAAACAGAATCACG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CGGCCAATCCCTCAATCGCTGCTGCCAATGCCTCAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GATGTTTTTCGGGCTGTGGCAAGTAGCAGTTAAACCG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CACTCAAAAACGATCCTCTGGATTTGGAGATTGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GGGATTCTTCACGGATGACCAGTGTGAGGTCCCGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TATCGGGTGGGGCGTCACTGGCAAAGAGATTGT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTTGGCTTGACGTGGATCGGGTCCGAACGACTGA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AATCAGTCCAATCAGTTTGCCAGCGATGTACGGGAA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AAAAGGAAATGACAAGCAGACTTGATGCCCTGTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CTTTGGCCGTTTGCGACCGACGCCAGCAAGAGCA
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CAGGCGATAGCTGTTTGGTTGGCATGTTCCAGTTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CCCAAACGTCAACGTGCTCAAGTGGCTTGCCAAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GACCAACTGAACAAAAATCCACTCACCAAAGTCT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TCCCGCCAACTTGCGTTACGTTGACATCAAAGACAT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	TTATTGCTGAGTCAAACAGGGACAGGCTCAACG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	ATTAAGCGCCGTAGCTGCCGACGCACCGGAAGAC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	AGTACGCCAACCGGACGACAACATCCGAAAGCTCGC
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	GTTCCAAACTGCGTCGTGATTGACAGCGTTAGCGTT
GTTTCAATCCACGCGTCCGTGAGGACGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042912.1\|WP_075085810.1\|6516663_6516903_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085808.1\|6517854_6519612_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP042912.1\|WP_084417323.1\|6506136_6507825_+\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|153419
NZ_CP042912.1\|WP_075085817.1\|6508552_6509314_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP042912.1\|WP_075085811.1\|6516167_6516665_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042912.1\|WP_075085818.1\|6507951_6508560_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|153219
NZ_CP042912.1\|WP_075085899.1\|6523464_6524694_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|274511
NZ_CP042912.1\|WP_075085901.1\|6501766_6502792_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP042912.1\|WP_075085815.1\|6510303_6511560_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|376389
NZ_CP042912.1\|WP_075085814.1\|6514136_6514427_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP042912.1\|WP_075085813.1\|6514430_6515462_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP042912.1\|WP_075085822.1\|6499373_6501716_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224196
NZ_CP042912.1\|WP_075085819.1\|6505173_6506049_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234781
NZ_CP042912.1\|WP_157665216.1\|6503028_6504042_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377450
NZ_CP042912.1\|WP_084417322.1\|6515458_6516154_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP042912.1\|WP_075085816.1\|6509310_6510300_+\|phosphoribosyl-ATP-diphosphatase	unknown	unknown	gnl\|CDD\|235067
NZ_CP042912.1\|WP_075085805.1\|6520682_6522932_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP042912.1\|WP_075085807.1\|6519608_6520280_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP042912.1\|WP_075085820.1\|6504066_6504462_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP042912.1\|WP_075085809.1\|6516933_6517788_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458

Protein	Function_ID	Function_description	E-value
NZ_CP042912.1\|WP_075085899.1\|6523464_6524694_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	6.52495e-19
NZ_CP042912.1\|WP_075085808.1\|6517854_6519612_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP042912.1\|WP_084417323.1\|6506136_6507825_+\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|153419	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and some eubacteria while they are encoded as bifunctional enzymes in other eubacteria, such that the enzyme is fused to histidinol-phosphate phosphatase, the penultimate enzyme of the histidine biosynthesis pathway. The histidine biosynthesis pathway is a potential target for development of herbicides, and IGPD is a target for the triazole phosphonate herbicides.	4.77338e-105
NZ_CP042912.1\|WP_075085817.1\|6508552_6509314_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	1.70602e-144
NZ_CP042912.1\|WP_075085818.1\|6507951_6508560_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|153219	cd01748, GATase1_IGP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.	1.87961e-67
NZ_CP042912.1\|WP_075085901.1\|6501766_6502792_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.06526e-87
NZ_CP042912.1\|WP_075085815.1\|6510303_6511560_+\|histidinol-dehydrogenase	gnl\|CDD\|376389	pfam00815, Histidinol_dh, Histidinol dehydrogenase.	2.06485e-177
NZ_CP042912.1\|WP_075085814.1\|6514136_6514427_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.63271e-31
NZ_CP042912.1\|WP_075085813.1\|6514430_6515462_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP042912.1\|WP_075085822.1\|6499373_6501716_-\|ABC-transporter-permease	gnl\|CDD\|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	2.8839e-11
NZ_CP042912.1\|WP_075085819.1\|6505173_6506049_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	4.34801e-74
NZ_CP042912.1\|WP_157665216.1\|6503028_6504042_+\|hypothetical-protein	gnl\|CDD\|377450	pfam05076, SUFU, Suppressor of fused protein (SUFU). SUFU, encoding the human orthologue of Drosophila suppressor of fused, appears to have a conserved role in the repression of Hedgehog signaling. SUFU exerts its repressor role by physically interacting with GLI proteins in both the cytoplasm and the nucleus. SUFU has been found to be a tumor-suppressor gene that predisposes individuals to medulloblastoma by modulating the SHH signaling pathway. Genomic contextual analysis of bacterial SUFU versions revealed that they are immunity proteins against diverse nuclease toxins in polymorphic toxin systems.	5.79315e-09
NZ_CP042912.1\|WP_084417322.1\|6515458_6516154_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.48884e-39
NZ_CP042912.1\|WP_075085816.1\|6509310_6510300_+\|phosphoribosyl-ATP-diphosphatase	gnl\|CDD\|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	4.97152e-49
NZ_CP042912.1\|WP_075085805.1\|6520682_6522932_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	7.56984e-54
NZ_CP042912.1\|WP_075085807.1\|6519608_6520280_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.40786e-105
NZ_CP042912.1\|WP_075085820.1\|6504066_6504462_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	5.17734e-15
NZ_CP042912.1\|WP_075085809.1\|6516933_6517788_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.70756e-148

>NZ_CP042912.1|WP_075085815.1|6510303_6511560_+|histidinol-dehydrogenase
MLKIIQASEFNAQSFPHSIDGETLGVAQSIVDDVRENGETAIRKYAEKFGERTSDQPLLIPREELDAALARISAKDSDLLHRVSARIQKFAAAQLNCLSELTTEVPGGKAGHTIEPIEHAGCYAPAGRYALPSTVMMTAVTARVAGCKRVTVASPNPSDMILATAAVSGADNVLAVGGAHAISAMAYGFDGLDRCDMIAGPGNRFVTAAKKIVHGDCGIDMIAGPSELVLVADESADPATVAADLLGQAEHDDDARPFLITTSAAIADMVSLEVEKQVKELPSCETATTSITNNGAAIVCDSIDQAIDICNRIAPEHLELHVENADSVAAQIRNAGCIFIGHNSAEVFGDYGVGPNHTLPTSGTARFTAGLNVFTFLRVRTWLKLDAAPPELVADTARLAEIEGLIGHQQSALRRSTE
>NZ_CP042912.1|WP_075085816.1|6509310_6510300_+|phosphoribosyl-ATP-diphosphatase
MIIPKVSIFAESMLVEQQESLVAKLKHWGFLGSAFLVVEGSGNEAFAGSLLKVIKKVSGFCDLLIRFDTASDDLAIEMLNVGASSLVVGSASQTEQWPTVPDDRMRIDADLSDVYCTENLESNPNIIADFLIERLKSDRPDGMWPTVICDQLGIALGLAYSNEASLRHAIATRNGTYWSRSRNELWVKGATSGATQQLLGIRLDCDSDCLRFTVTQGPPGFCHKKTHTCFGEERSIATVLHRLAERIESSNEKSFTRRLATDAGLLEKKLLEEAKELSDASQEDDRYEVAWETADVFYFSLVAMLKNGVGLDEVYAELARRMNRVIRRD
>NZ_CP042912.1|WP_075085817.1|6508552_6509314_+|imidazole-glycerol-phosphate-synthase-subunit-HisF
MLKSRIIPCLDVNDGRVVKGVKFQNLRDAGSPVELAAHYEAQGADELVVLDVSATRQARLAMLETIEEVRKQLSIPLTVGGGVGSVEDAGRLLGAGADKVSINSAAVRNPDLINEMADRFGAQCTVVAVDAKRDTSQENFWQVMTRSGTQGEPLDAAKWAGEAQQRGAGEILLTSFDRDGTRSGYDLELMDAVVAACSLPVIASGGADSVQHMVEAFEHGAHAVLAASIFHDKNMTVADVKRDLAKMGIEVRQ
>NZ_CP042912.1|WP_075085818.1|6507951_6508560_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MPPKIQIINTGVANIHSLQASFDRIEAPWALTESASDIESASHVVLPGVGAFGAAAAALDKLNLRDAIRSRLEQPDKTTLCICLGLQLLCNESEESPGAKGLGVLDAKIERFSQDVAVPQLGWNAVVPHESCETQKFPTGEAYFANSFRLGSSPAGWDYATTDYDGGFISSVWRGKTLACQFHPELSGKWGQTLLKGWYENA
>NZ_CP042912.1|WP_084417323.1|6506136_6507825_+|imidazoleglycerol-phosphate-dehydratase-HisB
MAYNPPKFKNEIDLHLSSNESRCPIEDLAAELADQAEIVSRYPNHLPLQNAIGSFVGVDPGRIVVTAGGDDAIDRVIQHSITPERKKIVCHQPSFEMISIYAGMYGATIDAPAWLGGDFPLDDFLSRIDSETAIVIVVTPNNPTGGLILADEIRKIADAAKAAGARLLVDNAYVEFADSDPTAEIASHDNVSIVRTFSKAIGLAGMRVGYLIASDKDYATTIRDASGPYPVSCVSLETSRRAIENFPDRMRANVSQIKQIRRLLDEVITKCGGKTIPSQGNFILAEFADAEKVWEQLAEQGIAVRIFPNSDLLKGKLRITCPTSQGDLVRLGRSLAKACDADVDVIQDVVMPDHYAAEAGSTDATQSPEEKFTSSTNRETKETNIQIELDLYGTGQTEISTGIGFLDHMLTALAFHSSMDLKLICDGDLHIDDHHTAEDCALALGTAIDEALGPRRGIKRFGFAYAPLDESLARTVIDLSGRPWPEIHLDLEREMVGTWACENIVHFFQSFAMTLKCSLHVDVIRGTNDHHKAEAAFKSLAKALQQALTRTEGAVPSTKGVL
>NZ_CP042912.1|WP_075085819.1|6505173_6506049_+|ATP-phosphoribosyltransferase
MSPSRDPNLVRIALPKGRMYDEIVALLKGAGISIRNSIRGYRPTISLANYDAKILKPRNVISMLVAGARDVGFAGADWLDEMGVELPEIIDTGLNPVRLVVAAPHQLLDNGKLPNRHLVIASEYPNMAERWIKDQGIDAEVLTTYGATEVFPPEDADLIIDNTATGSTLRANGLQIIDEIMTSSTRLYASKEAMANPEIKAQLDDLGLLLEAVLRARGRVMMDLNVAAADLDAVLKVLPTMRQPTISSISTDGWHSVRSAVPRKELAEVIPKLKVAGACDIVTTSAEQLIP
>NZ_CP042912.1|WP_075085820.1|6504066_6504462_-|helix-turn-helix-transcriptional-regulator
MNLQDDAWQWSEEPGTHLITDTQWKKISYLLAISDREQEVCRLLFEGITREEIAEKMNIKVRTVRHYLERLHTKLRVNNRVALVLRIIQVRDALKDLPDSDFPDKLGLNDGPPTGEPPSGNPPAPGEPPTG
>NZ_CP042912.1|WP_157665216.1|6503028_6504042_+|hypothetical-protein
MSADPTQNILFETSPFGTLDGIVEHDGRVVYFYLNERPDPAGNQPGKFGTRACWVRNLARGPMVLNKAEMAEGKIPMMPRNDCVDAELHQVPQSESLEIVWFEEGNGAALIEVDRESNTRTTLAIIPPWSGVEDFHGYAANCAHETALAWPLPENKAMQLRIDRAAEFWNSFTSEGSPFASLQQQLVDAYNKQFGEQNQKQYYAIDGGKFPPRGLLRYETESATILVTVGMSLCSQPAVELYVDQPSDLRRVELGVKISRQASDANAELIDTAMQSISTFAAYPWRNHNWLGPGHTIDWSPSGSKATLVRDNELQLSSFRNDPIGLLWIDAENDARR
>NZ_CP042912.1|WP_075085901.1|6501766_6502792_-|ABC-transporter-ATP-binding-protein
MTATAEAELVTANTADSGPPAIVSDKLFKTYSEGIFSRKKFQALKGVSFQVNQGEIFGLLGPNGAGKTTFIKVLLGIIRKSGGSASMMGYPAGSKNCREMVGYLPERLRIPPHLTAYNALEYFGNLSNVPTSVVKAKRDEYLELVGLKGRETDLVKKFSKGMVQRLGLAQALLHDPKMVILDEPTDGLDPRARAEMRAIIKNLANRGVTIFLNSHLLQEVEMICNRVAILDKGNLRYCGPVANIGEFLGAGSVGADGKPVATIKSYLFNLIGTPQTLQSGLEGCEFTIVSNVEGMAAVKVAFQDQSDVDRIVDKLRSSGVSIAGMELQRVSLEDAFLQLID
>NZ_CP042912.1|WP_075085822.1|6499373_6501716_-|ABC-transporter-permease
MRPYLAIIKDSFRAALASKVLYVLLGLIVLFLLLVAPLHVRESLDTHINLDRDVRASNQAQLVYQIKEGVENDNKGMQRIWEMLSQEVKNKVDNATPDENADSDRKVTDVDRIFAAQSVVGELNDLIEDPEFFRDQDWDSKKLGSEARGYLEKDVASLTEKQKQRLNRVLISESFGGMVRKGAKSSLDFYYGPFDWSGALSNLFMTNLSQDQFASQISSTITRFLDKVVLSIGLLIAILVTANVVPQTFEPGTLNLLLSKPVSRMGLFLAKFVGGCMFIALCAMLLFAGLWLWMGLGLGIWERAVLISIPLYIVVFAIYYSVSAFTGLVTRSTILAIVATGLFWAVCWSVGMLYLFFSAQTEAFEITKIVSTDQGVLQTDPGFEPKTWDDETGDWVETKAPELDEEEKIQRMVFRYMGDSVPFPDPLGPVFVEGTNQTAFSRVLVGDPKTHRKQQFFVSGDDGEFIRKGNLPSGIIAMFATKENIICINRRGRFYRYDPDMTFENGETSGETWFVSIAPEERVEVQDQSLVAVNHESEEIAIYQAGKLDVFEVDSDDEEKKYKLRKSAQIETGTREGMTCHVAFQGSTILLALGNGQVILIDAATLEKKNEYLPESRVAIESVSGSPDGRWYSLLYKDETLRLVDTEKDRVEKPSVRGQGSISAVHFGAGEMFVADRTDRVTGYDLKDMTRKETKSPTGTWMQRTWRYGIKPLYFAFPKPGEFYKVVTHLSSSSDAQHNPDIDLTFQEVRPNPWSPLISGLVFMAVMLTISCLTFSRTDY
>NZ_CP042912.1|WP_075085814.1|6514136_6514427_-|CRISPR-associated-endonuclease-Cas2
MYVLVTYDVSTIDKEGRKRLRQIAKICLNYGQRVQNSVFELLVDPAQWAECKAKLLEAYKPEEDSMRFYYLGANWHRRVEHAGAKPGVDISGPLII
>NZ_CP042912.1|WP_075085813.1|6514430_6515462_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKHLNTLFVTTEGAYLKKDGQAVVVSIEKQNRLRLPLHNLDGIVCLGNIMCSPALMGACARAGVSISFLTPYGGFIAAVNGYSPGNVLLRREQYRRADDPDSTLHIARHFVSAKIANSRSVLLRAARDSRDAESKSALQSTAKLMMRNIRAARNATTLDSLRGTEGESANTYFSVFNQMMSNRVKGMEFTFRSRRPPLDRINALLSFLYSMLTHDARSACEATGLDAAVGFLHRDRPGRPGLSLDLIEEFRAFLADRLVLSLLNRKQIQARDFDVTESGAVLLKEKPRKEVLAAYQKRKQDVITHPFLNEKTTVGLLVHLQARLLARYLRGDIDDYPPFVWR
>NZ_CP042912.1|WP_084417322.1|6515458_6516154_-|CRISPR-associated-protein-Cas4
MQSMFTDNQLLPISALQHLIFCERQCALIHVEQLWAENVLTVEGRHLHDKAHDGPSETARDIRIARGLWLKSNRLGLIGQADVVEFHRGGVVRPIEYKRGKPKKDASDRIQLCAQTLCLEEMLETDIDEGFLFYGTRKRRTKVEFDASIRDLTMRKIERLRQMIEDRETPTARRMPKCEKCSLVELCLPDSQRFRNGVAAWNDRQFHCDDDVDDVPETDPFDIGLDLLEPR
>NZ_CP042912.1|WP_075085811.1|6516167_6516665_-|hypothetical-protein
MTIPDEFQLAVNQFLKSRNHELISHLGTGTQGTVYLVNNPSRLSPHAVKFHNRKIAYERELAVFLRLKDLEINDVRGHSIPDLIGYDDELLAIEMTIVSPPFCLDFGGAYLDRPPDYTPEVWRDWEEMKSMAFEENWPAVKKILSTFEAFGIYIADVNPGNIKFS
>NZ_CP042912.1|WP_075085810.1|6516663_6516903_+|hypothetical-protein
MIKNSGTFSADVKLLLHIGSEQFEIGSLGPDYGILRDELPIESGEGVLETIVDNQSTRWNIRFTSPITGEAKRFTFEAV
>NZ_CP042912.1|WP_075085809.1|6516933_6517788_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MDHRYDFVLFFDVTDGNPNGDPDAGNLPRVDPETGHGLVTDVCLKRKVRNFVGTVKEEKPPFEIYVKERAVLNSVHDRAYQALKLDPKKAKQPQVEQCRQWMCQNFYDVRTFGAVMSTKVNCGQVRGPIQMAFSRSVDPIVSLEHAITRCAVATEKEAEKQDGDNRTMGRKFTVPYGLYRCHGFVNPFFAKQTGFSKDDLDLFWKSLEQMFELDRSASRGQMSPQALVVFEHKDALGNAAAHKLQQRVTTELVASDQPPRTFGDYKLNVDEDNLPEGISIQRKF
>NZ_CP042912.1|WP_075085808.1|6517854_6519612_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQKLCEYYDRIAADPEQSIAAVGFAPQKIGFEVVIESDGSLHALQDIRDTSGRKPANRIIELPYGGKRANAIAPMFLWDKAEYLLGWVPPELKVEPDSESEKDKEKRQKKIDRVGLCFRAAQEFHIGFAEELLMPEYQSLVAFWKNWKPDSLTEEQLQFLADIGTGFGVFRIRKSTNFLHDIPAVQEFWAQSQTVAEDSDTDGFCLVSGSNTTLARLHPVVKGIAGAQSAGASIVSFNDDAFTSYGKEQSFNAPIGESSAFKYATVLNRMLERDSGRRLRIGDTTCVFWADQSTEAEEIEDIFAFGLDNDQFEDETRANEIGAMLSRIAQGEAEPPGAGTGFYVLGLSPNAARLSIRFWISGTAGELIERVAQHQARLEIAKGPKDKTFLPLWLILAQTARESKEIQPLLGGALLRSVLTGGRYPESLLSAIIRRIRAEREIRHPKAAIIKAILNHNHQKEISVMLDIERAEPSYHLGRLFASLERAQEDALPGLNATIKDRYFGAASSTPSSVFPRLIRMSQHHVGKLEAGKKVVAEKRLQEIMGRLDAFPPHLGLADQGLFAIGYYHQRQDFFTKKSKKED
>NZ_CP042912.1|WP_075085807.1|6519608_6520280_-|type-I-C-CRISPR-associated-protein-Cas5
MDIEKNRVSLRIWGEFACFTRPEMKVERVSYDVMTPSAARGVLEAIYWKPEIRWVVRKIHVLQPIRFTNIRRNELGGVGPSDRTLKSYLGGEKTNVLAQVIEDDRQQRAATILQNVEYIIEAHYEVIKGNDPPQKHYEMFKRRASKGQCFQRPYLGCREFVADFEWYEGDPPAADISLAGERDLGFMLHDIDFQNGMTPRFFRATMKGGVIEVPQLYSSEVKA
>NZ_CP042912.1|WP_075085805.1|6520682_6522932_-|CRISPR-associated-helicase/endonuclease-Cas3
MTFYAHSLENQPQEKWETMQQHEDLVAEYCARFLKRIDPSLEAWGELLGKWHDLGKYSERFQNYIAAANHAGYEGDSDGHRAEVRGSVDHSTAAAKLAVRKFGDARGRLLSYSFAGHHAGLPDWDDGKSQSGLKQRLHKEIADWQSNAPSSLVDFEFPGMPQFKKPKNRSHAAFRVAFWIRIVFSALVDADFLATESFMSPGKSAQRPGQSESFIQMRELLEAKLARLTVDADATEVNRIRTLIGQQCKEKATLPNGLFSLCVPTGGGKTLASLRFALTHAIENNLDRVIVAVPFTSIIEQNADVYRKLFASLDSELMLEHHSNLDPEKDTTTSRLQSENWDASLVVTTNVQLFESLFASKTSRCRKLHRIANSVIILDEAQTLPIELLQSTMMALQELVDSYGCTVVLCSATQPALKKSAEFKIGLEDITPIIDDPQQLHQSLVRTRVEVAGKIGNEELAENIRREDQVLCIVNTRAEAAELFERLNDSESDSSFHLSTRMCASHRTRQLDNIRERLKNGESCRVVSTQLIEAGVDVDFPVVYRASCGLDSLAQAAGRCNREGKLDCGRVVLFEGENLPPPGFLRQSADSGKELIDEFADDLLSPQAIESYFRLHYWKKSDAWDYHRVLAAIGNRPSDMQFNFREIAQRYRFIKDDTETLLVGWDEKGDRLIEELAKSHPFLHRNTLRRLQRYSVQVRQYELGLLKAAGAIELVNDHWVLSQSHLYDDKLGLQLSRADGVLPVEDCII
>NZ_CP042912.1|WP_075085899.1|6523464_6524694_+|PQQ-binding-like-beta-propeller-repeat-protein
MTFVLWISNSASAQDWPGFLGENGAARSADKVPTTWNENENLLWKLELPGSGSSSPVVVGDRVFVTCFNESKKSFSRFVVCADKKTGQQLWSKEVPVDYLEDSYRGYIQEHGYASNTPVSDGEMLYVFFGKGGVYALDLEGNIKWNTIVGEQSSNRQWGSGASLLLHKNIVVVNASDEARAIIALDKSTGKEVWRSDSGAIDLAYGTPRVVELSDGTKEIVFSSAAKIWAMDPANGKMKWSAKTPTAGTVSPSVIVDGETLYSFGGYRSVGSISVKAGGTGDVSDSNVNWVSRTSSYVATPVLHDGKLYWIDDHGLAYSSNAADGETVYRQRVGLTGRPVYASPVLIDGKIYAVTRRAGTIVYQPGAEYVEIARNKIAGDETDFNASPAVSENRLYLRSNKALYCVGEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP042912_2	2.1\|1941518\|33\|NZ_CP042912\|PILER-CR	1941518-1941550	33	NZ_CP042912.1	2407722-2407754	0	1.0
NZ_CP042912_2	2.2\|1941602\|40\|NZ_CP042912\|PILER-CR	1941602-1941641	40	NZ_CP042912.1	1941658-1941697	0	1.0

1. spacer 2.1|1941518|33|NZ_CP042912|PILER-CR matches to position: 2407722-2407754, mismatch: 0, identity: 1.0

tgttttagtggcttaaacaaatggtttcgcggt	CRISPR spacer
tgttttagtggcttaaacaaatggtttcgcggt	Protospacer
*********************************

2. spacer 2.2|1941602|40|NZ_CP042912|PILER-CR matches to position: 1941658-1941697, mismatch: 0, identity: 1.0

ggcgcaaacaattgttttcgtggctaaaactctcgaccag	CRISPR spacer
ggcgcaaacaattgttttcgtggctaaaactctcgaccag	Protospacer
****************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	14372-14405	7	0.794
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	KJ433975	Mycobacterium phage 40BC, complete genome	30739-30772	8	0.765
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	KJ433973	Mycobacterium phage 39HC, complete genome	30739-30772	8	0.765
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NC_017311	Desulfovibrio vulgaris RCH1 plasmid pDEVAL01, complete sequence	81024-81057	8	0.765
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NC_005863	Desulfovibrio vulgaris str. Hildenborough plasmid pDV, complete sequence	86467-86500	8	0.765
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NC_008741	Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence	117342-117375	9	0.735
NZ_CP042912_11	11.7\|6512038\|33\|NZ_CP042912\|CRISPRCasFinder,CRT,PILER-CR	6512038-6512070	33	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1934716-1934748	9	0.727
NZ_CP042912_1	1.9\|1680711\|34\|NZ_CP042912\|CRT	1680711-1680744	34	MH825712	Microbacterium phage ValentiniPuff, complete genome	15745-15778	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	215299-215332	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP044283	Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence	501554-501587	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP017300	Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence	10150-10183	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	243533-243566	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP015203	Rhodococcus sp. 008 plasmid pR8L1, complete sequence	19874-19907	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP011297	Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence	73249-73282	10	0.706
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	23567-23600	10	0.706
NZ_CP042912_11	11.17\|6512693\|34\|NZ_CP042912\|CRISPRCasFinder,CRT,PILER-CR	6512693-6512726	34	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	2108855-2108888	10	0.706
NZ_CP042912_11	11.17\|6512693\|34\|NZ_CP042912\|CRISPRCasFinder,CRT,PILER-CR	6512693-6512726	34	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	2186377-2186410	10	0.706
NZ_CP042912_11	11.24\|6513156\|34\|NZ_CP042912\|CRISPRCasFinder,CRT,PILER-CR	6513156-6513189	34	CP003954	Rhodococcus opacus PD630 plasmid 5, complete sequence	31078-31111	10	0.706
NZ_CP042912_1	1.3\|1680360\|34\|NZ_CP042912\|CRT	1680360-1680393	34	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	451338-451371	11	0.676
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	57145-57178	12	0.647
NZ_CP042912_1	1.11\|1680828\|34\|NZ_CP042912\|CRT	1680828-1680861	34	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	57146-57179	12	0.647
NZ_CP042912_11	11.6\|6511973\|34\|NZ_CP042912\|CRISPRCasFinder,CRT,PILER-CR	6511973-6512006	34	MT408532	Synechococcus phage SynMITS9220M01, complete genome	144823-144856	12	0.647
NZ_CP042912_11	11.17\|6512693\|34\|NZ_CP042912\|CRISPRCasFinder,CRT,PILER-CR	6512693-6512726	34	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	80733-80766	12	0.647

1. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.794

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
cgaagccgaagcccagcgcctcgccggcatattg	Protospacer
******************.*******... * .*

2. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to KJ433975 (Mycobacterium phage 40BC, complete genome) position: , mismatch: 8, identity: 0.765

cgaagccgaagcccagcgtctcgccgatgaagcg--	CRISPR spacer
ggaagccgaagctcagcgtctcgcc--cgagcccgc	Protospacer
 ***********.************  .**. *

3. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to KJ433973 (Mycobacterium phage 39HC, complete genome) position: , mismatch: 8, identity: 0.765

cgaagccgaagcccagcgtctcgccgatgaagcg--	CRISPR spacer
ggaagccgaagctcagcgtctcgcc--cgagcccgc	Protospacer
 ***********.************  .**. *

4. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NC_017311 (Desulfovibrio vulgaris RCH1 plasmid pDEVAL01, complete sequence) position: , mismatch: 8, identity: 0.765

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
cgaccatgaagcccagcgtctcgcggttgaaggt	Protospacer
***   .***************** * *****

5. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NC_005863 (Desulfovibrio vulgaris str. Hildenborough plasmid pDV, complete sequence) position: , mismatch: 8, identity: 0.765

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
cgaccatgaagcccagcgtctcgcggttgaaggt	Protospacer
***   .***************** * *****

6. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NC_008741 (Desulfovibrio vulgaris DP4 plasmid pDVUL01, complete sequence) position: , mismatch: 9, identity: 0.735

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
cgaccataaagcccagcgtctcgcggttgaaggt	Protospacer
***   ..**************** * *****

7. spacer 11.7|6512038|33|NZ_CP042912|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.727

tacagatagagcgttgaaccgtcgagcaagaat	CRISPR spacer
gcgatctagcgcgttgaaccgtcgagcaagggc	Protospacer
   *  *** ********************...

8. spacer 1.9|1680711|34|NZ_CP042912|CRT matches to MH825712 (Microbacterium phage ValentiniPuff, complete genome) position: , mismatch: 10, identity: 0.706

cgaagctgaagctcaacgtctcgcggatgaagcg	CRISPR spacer
cgaagctgcagctgaacgtctcgcgttcacgcag	Protospacer
******** **** ***********  .. .  *

9. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
tcacgccgaagcccagcgccacgccgatacctag	Protospacer
. * **************.* *******.    *

10. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
acaagccgaagcccagcgactcgtcggccttgcc	Protospacer
  **************** ****.**..   **

11. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP017300 (Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
acaagccgaagcccagcgactcgtcggccttgcc	Protospacer
  **************** ****.**..   **

12. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
ccaggcggaagcccagcgtctcggcgatcggcga	Protospacer
* *.** **************** **** ..  .

13. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
acaagccgaagcccagcgactcgtcggccttgcc	Protospacer
  **************** ****.**..   **

14. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP011297 (Rhodococcus erythropolis strain BG43 plasmid pRLLBG43, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
acaagccgaagcccagcgactcgtcggccttgcc	Protospacer
  **************** ****.**..   **

15. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
acaagccgaagcccagcgactcgtcggccttgcc	Protospacer
  **************** ****.**..   **

16. spacer 11.17|6512693|34|NZ_CP042912|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.706

ctggattgcccgcgacggcgcgaacttcgttcct	CRISPR spacer
ggcgcttgcccgcgacggcgagagcttcggcgcc	Protospacer
   * *************** **.***** . *.

17. spacer 11.17|6512693|34|NZ_CP042912|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.706

ctggattgcccgcgacggcgcgaacttcgttcct	CRISPR spacer
agcgcttgcccgcgacggcgagagcttcggcgcc	Protospacer
   * *************** **.***** . *.

18. spacer 11.24|6513156|34|NZ_CP042912|CRISPRCasFinder,CRT,PILER-CR matches to CP003954 (Rhodococcus opacus PD630 plasmid 5, complete sequence) position: , mismatch: 10, identity: 0.706

tttggcttgacgtggatcgggtccgaacgactga	CRISPR spacer
cggcactcgacgcggatcgggtccgaacgatttc	Protospacer
.   .**.****.*****************.*

19. spacer 1.3|1680360|34|NZ_CP042912|CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 11, identity: 0.676

cgaagccgaagctcaacgtctcgcggatgaagcg	CRISPR spacer
cctggccgaagatcaacgtctcgcgcatctctgc	Protospacer
*  .******* ************* **

20. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.647

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
ttgagccgaaacccagcgtctggccgaaccgatt	Protospacer
. .*******.********** *****   ...

21. spacer 1.11|1680828|34|NZ_CP042912|CRT matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.647

cgaagccgaagcccagcgtctcgccgatgaagcg	CRISPR spacer
ttgagccgaaacccagcgtctggccgaaccgatt	Protospacer
. .*******.********** *****   ...

22. spacer 11.6|6511973|34|NZ_CP042912|CRISPRCasFinder,CRT,PILER-CR matches to MT408532 (Synechococcus phage SynMITS9220M01, complete genome) position: , mismatch: 12, identity: 0.647

tttgttgatatcaccagcaacaaaagagacgaca	CRISPR spacer
aatgtagatatcacctgcaacaaaagttggagtt	Protospacer
  *** ********* **********  . ...

23. spacer 11.17|6512693|34|NZ_CP042912|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.647

ctggattgcccgcgacggcgcgaacttcgttcct	CRISPR spacer
acactttgcccgcgagggcgcgaacgtcgccatc	Protospacer
 ..  ********** ********* ***.. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

160587 : 168161

Only_Syngen_Nebraska_virus(14.29%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075082886.1\|160587_161544_+	GDP-L-fucose synthase	A0A1J0F9I6	Only_Syngen_Nebraska_virus	1.7e-79	48.0
WP_075082887.1\|161709_163110_+	UDP-glucose 6-dehydrogenase	A0A127AXI2	Bacillus_phage	4.8e-59	32.9
WP_075082888.1\|163149_164160_+	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	6.3e-109	59.2
WP_087149600.1\|164271_165258_+	NAD-dependent epimerase/dehydratase family protein	E3T4Y8	Cafeteria_roenbergensis_virus	1.3e-31	31.7
WP_075082913.1\|165340_166426_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.2e-88	47.8
WP_075082890.1\|166422_167283_+	glucose-1-phosphate thymidylyltransferase RfbA	H9NC64	Sphingomonas_phage	5.2e-96	62.6
WP_075082891.1\|167279_168161_+	sugar nucleotide-binding protein	A0A1V0SDM3	Indivirus	1.7e-14	29.2

DBSCAN-SWA_2

1096715 : 1152323

uncultured_Mediterranean_phage(28.57%)

transposase,protease,integrase

attL 1143268:1143327|attR 1152284:1153173

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_084417199.1\|1096715_1097837_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_075085111.1\|1097833_1098805_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_148618623.1\|1098842_1099358_-	DUF4190 domain-containing protein	NA	NA	NA	NA
WP_075085324.1\|1099546_1101145_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_075085109.1\|1101377_1101977_+	recombination protein RecR	NA	NA	NA	NA
WP_075085108.1\|1102121_1103618_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_075085107.1\|1103780_1104188_-	bifunctional nuclease family protein	NA	NA	NA	NA
WP_075085106.1\|1104254_1105049_-	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_084417197.1\|1105148_1106336_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_084417241.1\|1106642_1107287_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_075085103.1\|1107293_1108982_+	serine/threonine protein kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	3.1e-20	31.7
WP_075085102.1\|1109271_1109445_+	Flp family type IVb pilin	NA	NA	NA	NA
WP_075085101.1\|1109809_1110385_+	prepilin peptidase	NA	NA	NA	NA
WP_075085100.1\|1110731_1111727_+	Flp pilus assembly protein CpaB	NA	NA	NA	NA
WP_075085099.1\|1111893_1113594_+	hypothetical protein	NA	NA	NA	NA
WP_075085098.1\|1113649_1114849_+	MinD/ParA family protein	NA	NA	NA	NA
WP_075085097.1\|1114975_1115929_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_075085096.1\|1115915_1116359_-	arsenate reductase ArsC	A0A2H4J437	uncultured_Caudovirales_phage	3.0e-15	40.8
WP_075085323.1\|1116369_1117782_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_075085095.1\|1117968_1120086_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_075085094.1\|1120070_1121228_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_075085093.1\|1121599_1123657_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	4.8e-108	41.7
WP_075085092.1\|1123878_1125141_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_075085091.1\|1125189_1126107_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_148618624.1\|1126116_1126308_-	hypothetical protein	NA	NA	NA	NA
WP_075085090.1\|1126428_1127364_-	aldo/keto reductase	NA	NA	NA	NA
WP_075085322.1\|1127356_1128235_-	1,4-dihydroxy-6-naphthoate synthase	NA	NA	NA	NA
WP_075085321.1\|1128295_1128913_-	futalosine hydrolase	NA	NA	NA	NA
WP_075085089.1\|1128920_1129472_-	hypothetical protein	NA	NA	NA	NA
WP_075085088.1\|1129475_1130354_-	lipase family protein	A0A1B1IWX0	uncultured_Mediterranean_phage	1.9e-61	49.4
WP_075085087.1\|1130641_1130839_+	hypothetical protein	NA	NA	NA	NA
WP_075085086.1\|1130845_1132348_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_075085085.1\|1132547_1135292_-	DUF1553 domain-containing protein	NA	NA	NA	NA
WP_075085084.1\|1135379_1136993_-	sulfatase	NA	NA	NA	NA
WP_075085082.1\|1137380_1137986_-	FHA domain-containing protein	NA	NA	NA	NA
WP_075085081.1\|1138967_1139372_+	hypothetical protein	NA	NA	NA	NA
WP_075085080.1\|1139410_1139641_+	hypothetical protein	NA	NA	NA	NA
WP_148618625.1\|1140291_1140849_+	hypothetical protein	NA	NA	NA	NA
WP_075085078.1\|1140849_1142472_+	hypothetical protein	NA	NA	NA	NA
WP_075085077.1\|1142826_1143285_+	hypothetical protein	NA	NA	NA	NA
1143268:1143327	attL	NA	NA	NA	NA
WP_068267841.1\|1143287_1144067_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_084417250.1\|1144308_1146369_-	DNA phosphorothioation-associated putative methyltransferase	I6X2Y8	Vibriophage	8.8e-17	32.9
WP_075085369.1\|1146848_1147112_-	hypothetical protein	NA	NA	NA	NA
WP_075085368.1\|1147160_1147886_-	hypothetical protein	A0A218MMB6	uncultured_virus	6.0e-29	31.2
WP_075085373.1\|1148003_1148615_-	DNA repair protein RadC	A0A1B2LRS6	Wolbachia_phage	3.1e-10	37.5
WP_075085367.1\|1148754_1148967_+	hypothetical protein	NA	NA	NA	NA
WP_075085366.1\|1148976_1149222_+	hypothetical protein	NA	NA	NA	NA
WP_075085365.1\|1149291_1149648_+	hypothetical protein	NA	NA	NA	NA
WP_075085364.1\|1149634_1150252_+	HNH endonuclease	NA	NA	NA	NA
WP_084417249.1\|1150248_1151244_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068267841.1\|1151543_1152323_+\|transposase	IS5 family transposase	NA	NA	NA	NA
1152284:1153173	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2410754 : 2488811

Burkholderia_phage(18.18%)

transposase,integrase

attL 2408927:2408951|attR 2493323:2493347

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2408927:2408951	attL	NA	NA	NA	NA
WP_068267800.1\|2410754_2411984_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	3.5e-29	27.1
WP_075082881.1\|2412205_2415343_+	DUF1553 domain-containing protein	NA	NA	NA	NA
WP_084416868.1\|2415601_2416975_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_075082911.1\|2417808_2418306_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_075082878.1\|2418606_2418936_-	hypothetical protein	NA	NA	NA	NA
WP_075082877.1\|2419093_2419543_-	hypothetical protein	NA	NA	NA	NA
WP_162273910.1\|2419920_2421855_+	recombinase family protein	NA	NA	NA	NA
WP_148618748.1\|2422137_2422335_+	hypothetical protein	NA	NA	NA	NA
WP_075082873.1\|2422812_2423181_+	DUF1257 domain-containing protein	NA	NA	NA	NA
WP_075082872.1\|2423177_2423369_+	DUF2997 domain-containing protein	NA	NA	NA	NA
WP_075082871.1\|2423446_2424931_+	AAA family ATPase	U5XJW0	Phormidium_phage	1.0e-54	29.5
WP_075082870.1\|2424950_2425241_+	hypothetical protein	NA	NA	NA	NA
WP_075082869.1\|2425314_2426268_+	hypothetical protein	NA	NA	NA	NA
WP_084416867.1\|2426270_2426513_+	hypothetical protein	NA	NA	NA	NA
WP_148618749.1\|2427057_2430750_-	hypothetical protein	NA	NA	NA	NA
WP_075082864.1\|2431317_2431683_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	1.7e-19	43.1
WP_087149599.1\|2431768_2432933_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.3e-36	35.0
WP_148618750.1\|2433071_2434142_+	hypothetical protein	NA	NA	NA	NA
WP_148618751.1\|2436574_2437144_+	hypothetical protein	NA	NA	NA	NA
WP_148618752.1\|2437118_2437442_+	hypothetical protein	NA	NA	NA	NA
WP_075082856.1\|2437505_2438018_+	thioredoxin family protein	A0A1J0GW78	Streptomyces_phage	4.3e-05	36.2
WP_075082855.1\|2438014_2438398_-	glyoxalase	NA	NA	NA	NA
WP_075082910.1\|2438586_2439003_-	MerR family DNA-binding protein	NA	NA	NA	NA
WP_075082854.1\|2439153_2439438_+	hypothetical protein	NA	NA	NA	NA
WP_075082853.1\|2439458_2440286_-	hypothetical protein	NA	NA	NA	NA
WP_075082852.1\|2440403_2444042_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_157665057.1\|2444038_2446315_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_075082849.1\|2447346_2447619_-	hypothetical protein	NA	NA	NA	NA
WP_075082848.1\|2447845_2448700_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_075082847.1\|2448786_2451222_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.6e-89	35.0
WP_075082846.1\|2451526_2453140_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_084416861.1\|2453198_2454758_-	TolC family protein	NA	NA	NA	NA
WP_084416860.1\|2454911_2456405_-	TolC family protein	NA	NA	NA	NA
WP_157665056.1\|2457534_2459031_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_075082842.1\|2459111_2462318_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_075082841.1\|2462343_2462700_+	hypothetical protein	NA	NA	NA	NA
WP_157665059.1\|2462727_2464875_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.7e-151	48.8
WP_075082840.1\|2464933_2465317_-	glyoxalase	NA	NA	NA	NA
WP_075082839.1\|2465591_2465738_+	rubredoxin-like protein	NA	NA	NA	NA
WP_148618753.1\|2465803_2466322_+	hypothetical protein	NA	NA	NA	NA
WP_157665055.1\|2466336_2467254_+	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_084416858.1\|2467289_2469731_-	fused MFS/spermidine synthase	NA	NA	NA	NA
WP_075082836.1\|2469782_2470337_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_162273909.1\|2471354_2472641_+	TolC family protein	NA	NA	NA	NA
WP_148618754.1\|2472804_2473614_+	hypothetical protein	NA	NA	NA	NA
WP_148618755.1\|2473768_2474248_+	hypothetical protein	NA	NA	NA	NA
WP_148618756.1\|2474473_2475847_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_075082829.1\|2475984_2479512_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	2.4e-62	23.5
WP_075082828.1\|2479537_2480101_+	hypothetical protein	NA	NA	NA	NA
WP_075082827.1\|2480222_2481077_+	hypothetical protein	NA	NA	NA	NA
WP_148618757.1\|2481652_2481958_+\|transposase	transposase	A9YX41	Burkholderia_phage	3.8e-09	39.6
WP_148618758.1\|2481954_2482839_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.0e-48	39.2
WP_075082195.1\|2483108_2485610_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.1e-129	42.0
WP_148618759.1\|2486196_2487162_+	hypothetical protein	NA	NA	NA	NA
WP_075082199.1\|2487572_2488811_+\|integrase	site-specific integrase	NA	NA	NA	NA
2493323:2493347	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3381205 : 3455895

Burkholderia_phage(22.22%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148618846.1\|3381205_3382435_-\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	2.7e-29	27.4
WP_075085915.1\|3382459_3382993_-	hypothetical protein	NA	NA	NA	NA
WP_068267815.1\|3383369_3383675_+\|transposase	transposase	A9YX41	Burkholderia_phage	2.9e-09	39.6
WP_148618847.1\|3383671_3384556_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-48	41.3
WP_084417077.1\|3384661_3385366_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_162273941.1\|3385785_3389538_+	hypothetical protein	NA	NA	NA	NA
WP_075084259.1\|3390737_3392120_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_157665122.1\|3392151_3393507_-	hypothetical protein	NA	NA	NA	NA
WP_075084261.1\|3393809_3394538_-	hypothetical protein	NA	NA	NA	NA
WP_075084262.1\|3394724_3395393_-	hypothetical protein	NA	NA	NA	NA
WP_075084263.1\|3395569_3396259_-	hypothetical protein	NA	NA	NA	NA
WP_075084264.1\|3396524_3396824_-	hypothetical protein	NA	NA	NA	NA
WP_075084265.1\|3396875_3397370_-	PH domain-containing protein	NA	NA	NA	NA
WP_075084266.1\|3397430_3399215_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	1.6e-43	27.4
WP_075084267.1\|3399245_3400094_-	hypothetical protein	NA	NA	NA	NA
WP_075084331.1\|3400127_3401195_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_075084268.1\|3401331_3401862_+	hypothetical protein	NA	NA	NA	NA
WP_075084269.1\|3402044_3402395_+	hypothetical protein	NA	NA	NA	NA
WP_168211090.1\|3402462_3403293_-	phosphoesterase	NA	NA	NA	NA
WP_075084270.1\|3403402_3404119_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_075084271.1\|3404485_3405307_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_075084272.1\|3405454_3406426_+	elongation factor Ts	NA	NA	NA	NA
WP_075084333.1\|3406565_3407486_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.3e-22	30.4
WP_075084273.1\|3407543_3408869_+	ABC transporter permease	NA	NA	NA	NA
WP_075084274.1\|3408969_3409710_+	UMP kinase	NA	NA	NA	NA
WP_075084275.1\|3410058_3410331_+	hypothetical protein	NA	NA	NA	NA
WP_075084276.1\|3410542_3413359_-	hypothetical protein	NA	NA	NA	NA
WP_075084277.1\|3413629_3414673_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.6e-59	40.9
WP_075084278.1\|3414677_3416153_+	hypothetical protein	NA	NA	NA	NA
WP_075084279.1\|3416227_3416938_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_075084280.1\|3417005_3417860_+	hypothetical protein	NA	NA	NA	NA
WP_075084281.1\|3417959_3418331_-	group 1 truncated hemoglobin	NA	NA	NA	NA
WP_148618849.1\|3418900_3419665_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_084417081.1\|3419890_3420895_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	5.0e-26	38.6
WP_075084283.1\|3421024_3421435_+	FHA domain-containing protein	NA	NA	NA	NA
WP_148618850.1\|3421567_3422230_-	hypothetical protein	NA	NA	NA	NA
WP_075084335.1\|3422304_3423855_+	sulfatase	NA	NA	NA	NA
WP_075084285.1\|3423946_3425368_+	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_084417087.1\|3425376_3425769_-	cytidine deaminase	NA	NA	NA	NA
WP_075084287.1\|3425785_3426052_-	hypothetical protein	NA	NA	NA	NA
WP_157665126.1\|3426145_3428158_-	hypothetical protein	NA	NA	NA	NA
WP_075084289.1\|3428534_3429374_+	metal-dependent hydrolase	A0A1V0SEU2	Hokovirus	2.0e-12	22.5
WP_075084290.1\|3429402_3430383_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_075084291.1\|3430637_3431717_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_075084292.1\|3431866_3434158_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_157665127.1\|3434362_3436918_-	hypothetical protein	NA	NA	NA	NA
WP_075084294.1\|3437219_3437846_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_148618851.1\|3438080_3439382_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_157665128.1\|3439489_3440689_-	metabolite traffic protein EboE	NA	NA	NA	NA
WP_075084297.1\|3440690_3441113_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_162273943.1\|3441256_3444901_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_075084299.1\|3444902_3446075_-	hypothetical protein	NA	NA	NA	NA
WP_075084300.1\|3446071_3447163_-	hypothetical protein	NA	NA	NA	NA
WP_075084301.1\|3447297_3448992_-	response regulator	A0A2K9L4R0	Tupanvirus	7.5e-06	32.3
WP_075084302.1\|3449523_3450747_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_075084303.1\|3450792_3452304_+	carboxypeptidase M32	NA	NA	NA	NA
WP_148618853.1\|3452435_3453287_+	hypothetical protein	NA	NA	NA	NA
WP_075084305.1\|3453397_3454180_-	hypothetical protein	NA	NA	NA	NA
WP_162273944.1\|3454266_3455895_-\|protease	trypsin-like serine protease	NA	NA	NA	NA

DBSCAN-SWA_5

3492954 : 3588418

Streptococcus_phage(18.18%)

transposase,protease,integrase

attL 3498307:3498338|attR 3596556:3596587

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075082825.1\|3492954_3494229_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_087149597.1\|3494408_3495692_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.1e-93	46.1
WP_075082826.1\|3495781_3496729_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.6e-45	37.5
WP_148618854.1\|3496808_3498083_+\|transposase	IS701 family transposase	NA	NA	NA	NA
3498307:3498338	attL	NA	NA	NA	NA
WP_075085653.1\|3498512_3499784_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.2e-136	57.3
WP_075085654.1\|3500081_3501218_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	4.5e-63	41.6
WP_075082825.1\|3501811_3503086_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_084416869.1\|3503343_3504885_-	serine hydrolase	G1BSP8	Mycobacterium_virus	6.1e-15	25.8
WP_148618855.1\|3504903_3508614_-	hypothetical protein	NA	NA	NA	NA
WP_148618856.1\|3508781_3509435_-	hypothetical protein	NA	NA	NA	NA
WP_075082916.1\|3509728_3510100_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_075082917.1\|3510352_3510619_+	DUF167 domain-containing protein	NA	NA	NA	NA
WP_075082918.1\|3511115_3511661_+	hypothetical protein	NA	NA	NA	NA
WP_157665060.1\|3511780_3512089_+	hypothetical protein	NA	NA	NA	NA
WP_075082920.1\|3512273_3513806_+	rhamnulokinase	NA	NA	NA	NA
WP_148618858.1\|3515365_3516358_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_084416877.1\|3516580_3518920_+	family 78 glycoside hydrolase catalytic domain	NA	NA	NA	NA
WP_084416871.1\|3518936_3522857_+	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_075082924.1\|3523025_3524465_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_075082952.1\|3525507_3526863_+	sulfatase	A0A2K9L1A5	Tupanvirus	3.5e-06	33.7
WP_075082925.1\|3527173_3528478_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_075082926.1\|3528669_3530604_+	hypothetical protein	NA	NA	NA	NA
WP_075082927.1\|3530726_3531041_+	L-rhamnose mutarotase	NA	NA	NA	NA
WP_075082930.1\|3532346_3537281_-	carbohydrate-binding protein	NA	NA	NA	NA
WP_075082931.1\|3537503_3538241_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_084416872.1\|3538668_3541443_+	hypothetical protein	NA	NA	NA	NA
WP_084416873.1\|3541489_3542917_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	3.7e-22	26.3
WP_075082933.1\|3543063_3544515_+	hypothetical protein	NA	NA	NA	NA
WP_148618859.1\|3545007_3545841_+	hypothetical protein	NA	NA	NA	NA
WP_084416874.1\|3546268_3548137_-	glycoside hydrolase	NA	NA	NA	NA
WP_075082955.1\|3548340_3549717_-	sulfatase	NA	NA	NA	NA
WP_075082935.1\|3550036_3553030_+	alpha-L-rhamnosidase	NA	NA	NA	NA
WP_075082936.1\|3553141_3554527_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_168211114.1\|3554761_3556090_+	sulfatase	NA	NA	NA	NA
WP_075082937.1\|3556845_3557919_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_148618860.1\|3558147_3558591_+	hypothetical protein	NA	NA	NA	NA
WP_075082939.1\|3558728_3560021_+	L-rhamnose isomerase	NA	NA	NA	NA
WP_075082940.1\|3560095_3561499_+	hypothetical protein	NA	NA	NA	NA
WP_168211091.1\|3561495_3561672_+	hypothetical protein	NA	NA	NA	NA
WP_075082941.1\|3561869_3564077_+	bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase	NA	NA	NA	NA
WP_075082957.1\|3565625_3566399_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.0e-18	30.9
WP_075082943.1\|3566571_3567777_+	hypothetical protein	NA	NA	NA	NA
WP_084416875.1\|3567869_3569453_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	1.5e-16	23.8
WP_075082945.1\|3569936_3570932_+	hypothetical protein	NA	NA	NA	NA
WP_075082946.1\|3571080_3572985_+	hypothetical protein	NA	NA	NA	NA
WP_157665061.1\|3573302_3574358_+	DUF1573 domain-containing protein	NA	NA	NA	NA
WP_075082948.1\|3574605_3575484_+	hypothetical protein	NA	NA	NA	NA
WP_068267841.1\|3575486_3576266_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_148618861.1\|3576846_3577281_+	hypothetical protein	NA	NA	NA	NA
WP_075085056.1\|3577416_3578010_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_075085057.1\|3578075_3579695_+	serine/threonine protein kinase	Q8QNG7	Ectocarpus_siliculosus_virus	1.7e-15	27.0
WP_075085058.1\|3579875_3581636_+	serine hydrolase	A0A2P1JQM9	Mycobacterium_phage	2.0e-14	22.7
WP_148618862.1\|3582057_3582378_+	hypothetical protein	NA	NA	NA	NA
WP_075085060.1\|3582559_3584518_+	hypothetical protein	NA	NA	NA	NA
WP_157665175.1\|3585054_3586917_+	hypothetical protein	NA	NA	NA	NA
WP_157665176.1\|3587432_3587576_+	hypothetical protein	NA	NA	NA	NA
WP_157665177.1\|3587659_3588418_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
3596556:3596587	attR	NA	NA	NA	NA

DBSCAN-SWA_6

5048557 : 5069203

Enterobacteria_phage(50.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_084416794.1\|5048557_5050048_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.3e-14	24.8
WP_075082382.1\|5050096_5050891_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	5.2e-42	40.5
WP_084416793.1\|5050995_5051754_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	2.8e-21	29.2
WP_075082380.1\|5051831_5052068_-	hypothetical protein	NA	NA	NA	NA
WP_075082379.1\|5052339_5052876_-	hypothetical protein	NA	NA	NA	NA
WP_075082378.1\|5053177_5054578_-	hypothetical protein	NA	NA	NA	NA
WP_075082377.1\|5054571_5055654_-	hypothetical protein	NA	NA	NA	NA
WP_148618981.1\|5055650_5056058_-	hypothetical protein	NA	NA	NA	NA
WP_068267841.1\|5056200_5056980_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_075085382.1\|5056982_5057756_-	hypothetical protein	NA	NA	NA	NA
WP_148618982.1\|5060312_5061092_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_148618854.1\|5061433_5062708_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_148618983.1\|5062952_5063255_+	hypothetical protein	NA	NA	NA	NA
WP_075084618.1\|5063280_5064357_+	hypothetical protein	NA	NA	NA	NA
WP_084417128.1\|5064478_5065591_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_157665153.1\|5065857_5066526_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_075084620.1\|5066590_5069203_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.9e-125	39.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042912

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection