CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP042826	Rhizobium sp. WL3 chromosome, complete genome	3 crisprs	csa3,DEDDh,WYL,cas3	3	4
NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	0 crisprs	DEDDh	0	63
NZ_CP042824	Rhizobium sp. WL3 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042826_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042826_1

1837047-1837125

Orphan

Consensus_repeat	Method
CCTTCTCCCCGCTTGCGGGGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042826_1

>merge|NZ_CP042826|1|1837047-1837125|CRISPRCasFinder
CCTTCTCCCCGCTTGCGGGGAGAAGGAGTTTCCGGGCCGACGTCGGTGCTGGCATCCCCTCTCCCCGCTTGCGGGGAGA

>NZ_CP042826|1|1|1837047-1837125|CRISPRCasFinder
CCTTCTCCCCGCTTGCGGGGAGA	AGGAGTTTCCGGGCCGACGTCGGTGCTGGCATC
CCCTCTCCCCGCTTGCGGGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042826.1\|WP_147886715.1\|1836010_1837018_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223787
NZ_CP042826.1\|WP_147886712.1\|1832148_1832946_+\|cellulose-biosynthesis-protein-BcsN	unknown	unknown	gnl\|CDD\|374958
NZ_CP042826.1\|WP_147886720.1\|1841821_1842403_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225158
NZ_CP042826.1\|WP_147886722.1\|1842876_1843989_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP042826.1\|WP_147886710.1\|1827740_1830104_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	unknown	unknown	gnl\|CDD\|377001
NZ_CP042826.1\|WP_147886717.1\|1838022_1838859_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP042826.1\|WP_147886723.1\|1844000_1846244_-\|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl\|CDD\|225789
NZ_CP042826.1\|WP_147886709.1\|1824839_1825100_-\|DUF4212-domain-containing-protein	unknown	unknown	gnl\|CDD\|132686
NZ_CP042826.1\|WP_147888841.1\|1833425_1833884_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042826.1\|WP_147886711.1\|1830100_1832152_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042826.1\|WP_147886719.1\|1840174_1841584_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|223354
NZ_CP042826.1\|WP_147886716.1\|1837183_1838023_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP042826.1\|WP_147888842.1\|1834058_1834859_+\|creatininase-family-protein	unknown	unknown	gnl\|CDD\|376872
NZ_CP042826.1\|WP_147886721.1\|1842418_1842808_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|223329
NZ_CP042826.1\|WP_054148543.1\|1847071_1847968_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP042826.1\|WP_147888840.1\|1825582_1827829_+\|UDP-forming-cellulose-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|274400
NZ_CP042826.1\|WP_147886713.1\|1832973_1833321_-\|DUF393-domain-containing-protein	unknown	unknown	gnl\|CDD\|367833
NZ_CP042826.1\|WP_147886718.1\|1838858_1840172_+\|cytosine-deaminase	unknown	unknown	gnl\|CDD\|236062
NZ_CP042826.1\|WP_147886714.1\|1834878_1835832_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176117
NZ_CP042826.1\|WP_147888843.1\|1846253_1847072_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP042826.1\|WP_147886715.1\|1836010_1837018_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	8.55057e-27
NZ_CP042826.1\|WP_147886712.1\|1832148_1832946_+\|cellulose-biosynthesis-protein-BcsN	gnl\|CDD\|374958	pfam17038, CBP_BcsN, Cellulose biosynthesis protein BcsN. This is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	1.17233e-20
NZ_CP042826.1\|WP_147886720.1\|1841821_1842403_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|225158	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only].	9.93535e-41
NZ_CP042826.1\|WP_147886722.1\|1842876_1843989_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP042826.1\|WP_147886710.1\|1827740_1830104_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	gnl\|CDD\|377001	pfam03170, BcsB, Bacterial cellulose synthase subunit. This family includes bacterial proteins involved in cellulose synthesis. Cellulose synthesis has been identified in several bacteria. In Agrobacterium tumefaciens, for instance, cellulose has a pathogenic role: it allows the bacteria to bind tightly to their host plant cells. While several enzymatic steps are involved in cellulose synthesis, potentially the only step unique to this pathway is that catalyzed by cellulose synthase. This enzyme is a multi subunit complex. This family encodes a subunit that is thought to bind the positive effector cyclic di-GMP. This subunit is found in several different bacterial cellulose synthase enzymes. The first recognized sequence for this subunit is BcsB. In the AcsII cellulose synthase, this subunit and the subunit corresponding to BcsA are found in the same protein. Indeed, this alignment only includes the C-terminal half of the AcsAII synthase, which corresponds to BcsB.	2.69826e-18
NZ_CP042826.1\|WP_147886717.1\|1838022_1838859_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	3.12552e-52
NZ_CP042826.1\|WP_147886723.1\|1844000_1846244_-\|glycoside-hydrolase-family-2-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	1.98998e-110
NZ_CP042826.1\|WP_147886709.1\|1824839_1825100_-\|DUF4212-domain-containing-protein	gnl\|CDD\|132686	TIGR03647, Na_symport_sm, putative solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments. [Transport and binding proteins, Unknown substrate].	1.40122e-33
NZ_CP042826.1\|WP_147886718.1\|1838858_1840172_+\|cytosine-deaminase	gnl\|CDD\|236062	PRK07583, PRK07583, cytosine deaminase.	0
NZ_CP042826.1\|WP_054148543.1\|1847071_1847968_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.85981e-80
NZ_CP042826.1\|WP_147886716.1\|1837183_1838023_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.70046e-108
NZ_CP042826.1\|WP_147888842.1\|1834058_1834859_+\|creatininase-family-protein	gnl\|CDD\|376872	pfam02633, Creatininase, Creatinine amidohydrolase. Creatinine amidohydrolase (EC:3.5.2.10), or creatininase, catalyzes the hydrolysis of creatinine to creatine.	4.7048e-78
NZ_CP042826.1\|WP_147886721.1\|1842418_1842808_-\|RidA-family-protein	gnl\|CDD\|223329	COG0251, TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis].	6.7485e-25
NZ_CP042826.1\|WP_147888840.1\|1825582_1827829_+\|UDP-forming-cellulose-synthase-catalytic-subunit	gnl\|CDD\|274400	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.	0
NZ_CP042826.1\|WP_147886713.1\|1832973_1833321_-\|DUF393-domain-containing-protein	gnl\|CDD\|367833	pfam04134, DUF393, Protein of unknown function, DUF393. Members of this family have two highly conserved cysteine residues near their N-terminus. The function of these proteins is unknown.	9.59051e-21
NZ_CP042826.1\|WP_147886719.1\|1840174_1841584_+\|FAD-binding-protein	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.62184e-49
NZ_CP042826.1\|WP_147886714.1\|1834878_1835832_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176117	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.3334e-65
NZ_CP042826.1\|WP_147888843.1\|1846253_1847072_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.48405e-69

>NZ_CP042826.1|WP_147886715.1|1836010_1837018_+|ABC-transporter-substrate-binding-protein
MRDMLTKTSLLAVIGLAALTSAAFALDEVTYGTNWLAQAEHGGFYQAVADGTYEKYGLKVTVVQGGPQAANRALLIAGKVDFYMGSPLGEMDAVKEGIPLIDVAAIFQKDPQVLLAHPDQGIETFADLAKLDSIFMGKDGYVTYYEWMKKNFEGFTDEKYKPYTFNPAPFIVDPKSAQQGYLTSEPYEIEKQAGWAPKVFLLADNGYNPYSTMITTTTTMVETKADVVQRFVDASAEGWYNYLYGDNKAANDLIKVDNPEMTDGQIEYSIAKMKEYGIVESAEALDKGIGCMTDEKYKAFFDAMVQIGVQPADLDYKKAYTTQFVCKGVGMALKK
>NZ_CP042826.1|WP_147886714.1|1834878_1835832_-|LysR-family-transcriptional-regulator
MLHSRKLLYINEIVRCGSIRKAAARLNVASSAVNRQILAFEEELGAPIFERLPKGLRLTAAGELCVEHIRDVLKNYERLEGRIRGLKTPHAGKVSLVTTVGLASGPLPEILAGFIAKHPRVQIKLRNDGGSTTINPVLTGEVDLGLGFNIPATPGIRTLANFDVPVGVVLPPGHRLAQEEGPVDLVEVVQEPLILAQSGTSLRNIIDLALAPLPLLVEPVVETNSSELMKQLVKAGTGLTLLNPLDAVAECRRGELIFRPLTEAHIRHQPMKLFARARAPLDSATSLFVEYLMQELLAQVQDLKARGHIPETIRGQG
>NZ_CP042826.1|WP_147888842.1|1834058_1834859_+|creatininase-family-protein
MVKPFFWNELNTTDFAGLSADTMIAILPIASTEQHGPHLPIATDVAIANGMLAELKVQRPDDLDFLVLPTQEIGKANEHVYGPGSLSFGPEILIPAWTAIGSKVAEAGVRKLVIVNSHGGNVDVMSIVARELRVRHQMAVVSTQWGRFGNPDGMISDHESRYGIHGGEVETSLMLHFRPDLVRMDKAQNFVSKAEEMRASSKFLTPLPPHSLAWIAHDLNPHGVVGDASKGTAEKGEAICKHQVAGFIELLRDVAAYPLSNLYVPD
>NZ_CP042826.1|WP_147888841.1|1833425_1833884_+|hypothetical-protein
MLEFTPPSEQAEPRWNEPDLQRKASRISETVVEHATIKTEHGLVLLPGVQGFGPDEQADEPVVKMAYWIFPGLTDFGRLSSRFPSKTLMESGVTLLRGARGHQGLPPESDAEADDGNDEADRRAEPADLADAEGQAGREQGASRNRLKDAHS
>NZ_CP042826.1|WP_147886713.1|1832973_1833321_-|DUF393-domain-containing-protein
MNPEVTVWFDSSCPLCQREISLMRRLDRRGAILFVDACDPSTGCPLDRAEILSRFHAEEKGRLLSGAPAFAAMWRAIPLLRPLGVAAGWAPLTPVFEAAYRGFLRVRPRLQRLFR
>NZ_CP042826.1|WP_147886712.1|1832148_1832946_+|cellulose-biosynthesis-protein-BcsN
MKTSSLLFLGFLALHGCNTVEDPFLDGMTSAAGTAQTGNRELPVHLARASLTGLGEAPLSVRQTMSNGGARQDIVYANRTAVPGDNRLTLVAASAAKRDGQRGPSRNEIAKALQTDFPGIRMGIDPVIRRNSYGPYGTATGKLGNDGGCVYAWQALDKNAAVDLAEPITIRLRYCRPDIGPEILADLLGGLTLGGGAGAQVGPVLGSLHQTTSTYAYSAPETDKAPPRATAFISRIEPARDQTAPAEVSAEETPPSTAAAIPMPE
>NZ_CP042826.1|WP_147886711.1|1830100_1832152_+|hypothetical-protein
MKKNSRVAVLCAGTILNTFFLAMPLTATPLVVRQAASTMAPPSTEAVNEASTPEIGSGPDSVDLAALYYYARNGEADRVEAETRRLAVKFPDFALPADLYAPEAGNKVDESSLWQLYERDDYAGIDQEVSRIAAANPGWEPSDDFRVKLERRKLRNTITEAHANKDFTTIVRIGTGLDPMLETEIDLLWMMIDAYRANDMREALTDIYRGILFRGQGKAFSNELVLTTLQKAIEDVPAADLREAMQVLSADPDLALGMKALQLDLMRREIGDYAASVPGAPRPGDGILSTVRQVAETEGSPEDLALMGWYLLKSEQPKEASAWFERLMADRPTAEAVRGLALSLVHLSKEGEAFALVSKHMDLLYAEDAFVANQLSFAFKGEGKAKIEDSVVARYSEAIQKTESADHARLLGWYAYNSRQFEPARAWFAKAFDWQPEGDSLKGIALSLTRLGEKIQVSELRKRHGEAYASIFAELKSATEPRGKSGKAVDAPSGIEARYLSSLQKKDYGACIADLRKLEAKGPLRPDVQVSKGWCLLGLNHLAEARQAFTDGLSRGGGKADDAAYGLGLTLLRASLTDDAEALLMQQSLTPLRERELRAELLWQKARTAFDRKQYRQTLEALNARLQLTSEPVGISQMRAWSHYHLGNLAQSRAIFAQLNQVMADPANSRGIAAINERMGITR
>NZ_CP042826.1|WP_147886710.1|1827740_1830104_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB
MHRWPSMLPPCAWTPPPPCRLRREERHMRKRNLTVLLSTATILLLAAPNLSTVANDLTPATTSTSATTPMSRGQSQLVSFRQSESEMRLEGEDAVRELTFYLSPDQAATGGALRLSYTNAVSVLPDDGTVDVELNGKPLSSFPIRSPHGPTTHDLPVAAKNLVAGWNSVRIRARQHHRIDCSIDATYELWSQFDPLVSGFVAGVAAKDGDLASLLSVGRNGDAATEIRLIAKPETARLALRDSLALMQTLALILGRNDIVVTVGELEGTGPGIDLHVGDLDNPELPQASQDALAGAPRGLSVRRNDAGRYTVTMRASGQAETQALLLAAVNGPLQHLIRANKLAASRSIVDGSEPGTHELSGVGYKTSPFSGRLFQTSFDVVMPADFYPGDYATVDLHLNAATAPGLAAGTQILVRVNERAAASQMLHDPEGVRLEDKPLELPLRAFHPGVNHVRILAELPTASDLACDPAARDESRSRFLMLQETTVTIPPLARAGRLPDLAAFAGKSFPFAGSGAFDIYVDAPTPARLGSALTVLARMAISAGHPLPAELKIGRPDPAKTTGNVLVVNADGGAAESAELVVPKGNRLHMQATDALVTASIGDTGPSSDSEALLNAFQVETKLDEEKLSAKSRVTAWLSAAATTVNRWLTYREIGDDVHIEMQDRLISLRQSQVPEGDAVWTVVSAADETSLSLGVAALTRPETWTALEGEESVIRRSDLELVNRKPQAYSFFPITDTSPANLRRLAAAWLSDNFLVYVALVVLLMGGFGWWVGYMVPRKGVRTVE
>NZ_CP042826.1|WP_147888840.1|1825582_1827829_+|UDP-forming-cellulose-synthase-catalytic-subunit
MCVALPAIFAGLLGVFLLWLPISLQAQLVLSLAILGLMLLFMMRPQNKTFRLMTFVFSAVLALRYAFWRTTETLPDIHEPLNFIPGIILYAAEMYCLVMLAINFFIVADPLQRKPAPRLQDSEKPTVDVFVPSYNESADLLALTLAAAKSMNYPADKLTVYLLDDGGTDAKCNQSDPRAAIAARRRRDELQGLAAALGVRYHARAENSHAKAGNLNAGLGISSGELVVVFDADHAPVREFLNETVGYFAEDEKLFLVQTPHYFLNPDPLEKNLQTFGKMPSENEMFYSVVQRGLDKWNASFFCGSAAVLRRKALKETDGFSGQSITEDCESALALHCRGWHSLYVDKPLIAGLQPETLVSFIGQRVRWAQGMLQILTLNRPFLQRGLTTAQRICYAGTNLFWLFPLTRLTFMFSPLLYIFFSLQIFEANITEFVCYSVTYLISSFAMQSYLFGRVRWPWVSELYEYVQSVMLFGAILSVVRNPRKPTFNVTSKGQTLDESKLSPLARPYFLIFFLLFAATCYAIWRYTTEAMPSELLLIVAGWNIINMGVAGAALGSVSERRERRRNQRLNVRRHAILHLGGTGYAVIIGDVSSGGLALQFIDGKPVDGIDKGHEAVIEVRRHGRSMEVPLICRSVIRRPDETNFGFAFAERTPETFVAIAEMMYCDQQPLQDRWNRVQKHKGFFIGTIRFALWTMTETLRAFSCALRLVRETTEVSHPDAPMAIHAPTMRLDTPAAVSATQRGTAYA
>NZ_CP042826.1|WP_147886709.1|1824839_1825100_-|DUF4212-domain-containing-protein
MTDKTSSNAYWSANVRIIYICLAIWAVVSYGFGILLRPALSGIAVGGTDLGFWFAQQGSIVVFIALIFGYAIYMNKIDREFGVDEQ
>NZ_CP042826.1|WP_147886716.1|1837183_1838023_+|ATP-binding-cassette-domain-containing-protein
MSLSEDPTTPPPPEQRRALVVLKDVSKVFSSGTVALTGMSLTVNGGEFVSLLGPSGCGKSTALRIIAGLGDTTTGTIDWPSSRINSKGLPEGDISFVFQEPTLMPWATVFGNVYLPLRLRGISKSAAKADILAALDRVGLKDFVDAYPRELSGGMKMRVSIARALVTKPKLLLMDEPFAALDEITRQKLNDDVLRLWRETGITVIFVTHSVFESAYLSNRIIVMKARPGRVHDDFPLVTSAERGLQYRTSEEYRATCDKVSRSLIEAIGFPLADGMERH
>NZ_CP042826.1|WP_147886717.1|1838022_1838859_+|ABC-transporter-permease-subunit
MSNLPPVHPPRSGFASLYGETLLKVLIPILVVCLLIVVWQVGVWVSGVPQYILPGPIAVAGALFKDWGTLSPALWVTTKITLMSLGLALLGGVGIAVALVQSKWIEIAFYPITVILQVTPIVAIAPLILIYSPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLLNLFDLYGASRWQTLLYLKLPASLPYFMTGLKIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQFRLNIPRLFAALFLLSCLGVVIFAITSFISWLALHRWHESSLKREN
>NZ_CP042826.1|WP_147886718.1|1838858_1840172_+|cytosine-deaminase
MSSPVTALPAAKRFVLANATLPQICVDGVESPACEGLISADIVVADGKVEAILKPGKAPSGLPSTDLRNGMVWPTFVDMHTHLDKGHIWDRRPNPSGDFVGALEAVKTDREAKWSAADVKTRMEFSLKTAYAHGTSLIRTHLDSLAPQHRISFEVFSEIRDAWAGKVDLQAAALFPFDQITDEAFFKDLVEVIVAHKGLLGGVTYLMPGLDEKLDILFRTASENGLDIDLHVDETQDKETLTLKTIAEAKIRNGYQGAVTVGHCCSLARQDDDLAKRTIDLVAEAGLSVVSLPMCNMYLQDRVAGRTPRQRGVTLFHELTAAGVATAVSSDNTRDPFYAYGDLDPVEVFREAVRIIHLDHPLDTAARVVTRTPADILKRPDHGRIAVGGKADLVLFSARRWSEFLSRPQADRIVMRNGMGIDRSLPDYRDLDPLLGV
>NZ_CP042826.1|WP_147886719.1|1840174_1841584_+|FAD-binding-protein
MADYAKIIEELEGIAVEDNPALVKQKSRDFYWYSPILKEELDNVVGDLVVSPTTEEEVIRTLKVAYAHGVPVTPRGGGTGNYGQAMPLSGGIVLNLINMNKVKQILPGRVICEPGIIISELDKQTKEHSGQELRFHPSTKQTASVAGFIAGGSGGVGSITWGGLRDLGNILRLRVVTMEAEPRVLELSAWDLQKVSHAYGTNGIITEVEMPLAPAYDWVDVIVGYDEFMDAVKFADALSHKNGILLKEVAPIAAPIPYDYFTRHKPWLKEGQSVVVLMVAPHSMEPFLALAGRMKGDVRFRSDTVESMKGIPHAYELTWNHTTLRALKLDTNITYLQVQYPGPDHVEKVRVMTELFPDEVIGHLEFIKFDGHIQCAGLPLVRYTTRERLEEIIRIHEENGCPIFNPHRYTLEEGGMKQTDQVQLAFKKETDPKGLLNPGKMIAWENPDFDFSAGKNYLFPGLEVFSEAS
>NZ_CP042826.1|WP_147886720.1|1841821_1842403_+|NAD(P)H-dependent-oxidoreductase
MRVLVLHSHPLEESFGRALYKLTCDSLEKAGHEVDGCNLYEEGFDPVLSAHDRRVYHDIPDNLSLVQPYVERLRQAEALVIVTPVWNFGFPAMLKGYFDRVWLPGVSFDLVDGKLTPTLRHIKKLAAVMTYGATPMRAFLAGNPPKKIVKRVIRAQIKIGAPVKYLAHYDMNNCTEETRAAFMAKVRREMENF
>NZ_CP042826.1|WP_147886721.1|1842418_1842808_-|RidA-family-protein
MKKVFNPPSVRRPFGHYNHGLLVPPGASLLVTSGQLGIRPDDTIPTDVTGQAELCFEAIKAILEEAEMTFADVIRVSGFVTRREDFADYMAVRDRYTLDPKPVSTLLVVGGFTRPEFLVEVEVTAAKLV
>NZ_CP042826.1|WP_147886722.1|1842876_1843989_-|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MAEVRLTDIRKSYGSLEVIKGVNLEVSSGEFVVFVGPSGCGKSTLLRMIAGLEDISSGDLTIGGTVMNDVDPSKRGIAMVFQTYALYPHMTVRENMGFALRFAGMAKDEIEQRVNAAAKILELDALMDRKPKALSGGQRQRVAIGRAIVRQPDVFLFDEPLSNLDAELRVHMRVEIARLHKELNATIVYVTHDQVEAMTLADKIVVMRGGIVEQVGAPLVLYDDPDNMFVAGFIGSPRMNFLPAAVVAQAEGGQVTVALKARPDTQLTVSCATPPMVGDAVTVGVRPEHFLPDGSGDTQLTAHVDVVEHLGNNSYVYAHTVPGEQIIIEQEERRHGARYGDEIAVGLAAKTSFLFDASGRRIRKPTGPDL
>NZ_CP042826.1|WP_147886723.1|1844000_1846244_-|glycoside-hydrolase-family-2-protein
MRIIETFNKDWTFRAGFELGFASALQPGETVQLPHTAVELPYNYFDEKIYQKAFTYQKVIAWDPRFEGREVSLVFDAAMADSVVYLNGVEITAHKDGYTPFEARLTPHMKGGDNLLTVKIDGSENPEIPPFGGVIDYLTYAGIYRDVWLKVTAPVSIRNVKIETPDVLAETNQVTAKVWISNPTDQALSGKVTAVLKDGAGQEIARTEASVSGGEVSLGFSGLQGITLWDIDNPALYQLTVTLESAAGADETTSRFGFRSAEYTIEGFKLNGRVVKLRGLNRHQAWPHLGYAMGRRGQEKDADILKFDLACNIARTSHYPQSKYFLDRCDEIGLLVFEEIPGWQHIGGETWKAESVQNVRRMIERDWNHPSIIIWGVRINESQDAHDFYVETNAMARSLDTTRQTGGVRYITESELLEDVYTMNDFILGMEELPGHNRERLVLRDQREVTGLDRKVPYMITEYGGHMYPTKRFDQEQRQAEHVGRHLAILNAAAGDPSISGSTGWCMFDYNTHKDFGSGDRICYHGVTDMYREPKFAGYAYASQGDPHDGIVLQPVSFWARGERNIGGVLPLIILTNCDYVEIRMGHIVKRIEPDTKTYPHLPHPPCILDHSMVTPEEFGEWGMTWRDGELVGFINGEEVVRRHLPADPLPTTLEIAADDTELRAGEKDTVRVILRALDQGGNVLGFFDDPVEVSLEGPGRIVGPSLLSFKGGAVGVYVEAGNEAGHLTLTATCRPFGTQRITFNVT
>NZ_CP042826.1|WP_147888843.1|1846253_1847072_-|ABC-transporter-permease-subunit
MTTLRRRLPDIVQYGVLSLAAFLSIFPFIWMVIGATNTTSQIIRGKVTFGTALLDNIASFFAQVDVPLVFWNSVKIALVGTALTLLVSSLAGYGFEMFRSKLRERVYTVILLTLMVPFAALMIPLFMLMGQAGLLNTHIAIMLPMIASAFIIFYFRQASKAFPTELRDAAKVDGLKEWQIFFYIYVPVMRSTYAAAFVIVFMLNWNNYLWPLIVLQSNDTKTITLVVSSLASAYSPEYGTVMIGTILATLPTLLVFFAMQRQFVQGMLGSVK
>NZ_CP042826.1|WP_054148543.1|1847071_1847968_-|sugar-ABC-transporter-permease
MATTSRSSLKRYYDVNGWLFVAPAIALISLFMLYPIARSLVLSLYSGRGMMLKFSGTGNLVRLWNDPVFWQALQNTVIFFIIQVPIMITMALILAAMLNNPKLRFSGLFRTMIFLPCVASLVAYSILFKSMFSLDGVVNNTLLAIGIIGEPIGWLTDPFWAKVLIIIAITWRWTGYNMIFYLAALQNIDRSIYEAAKIDGVPSWGRFAFLTIPMLKPVILFTTITSTIGTLQLFDEVYNFTEGTGGPANSTLTLSLYIYNLTFRFMPSFGYAATVSYVIVLMVAVLSFLQFYAARERR

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Crispr_ID: NZ_CP042826_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042826_2

2264938-2265056

Orphan

Consensus_repeat	Method
ACCCAGATTGCAGCACTGAAGCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP042826_2

>merge|NZ_CP042826|2|2264938-2265056|CRISPRCasFinder
ACCCAGATTGCAGCACTGAAGCCGACGCAGATCGCCGCTTTAAGCCCCACCCAGATTGCAGCACTGACGCCTGAGCAAGTCGGAGCTTTCTCGAACCCGCAGATTGCGGCGCTGAGCGC

>NZ_CP042826|2|2|2264938-2265056|CRISPRCasFinder
ACCCAGATTGCAGCACTGAAGCC	GACGCAGATCGCCGCTTTAAGCCCC
ACCCAGATTGCAGCACTGACGCC	TGAGCAAGTCGGAGCTTTCTCGAAC
CCGCAGATTGCGGCGCTGAGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042826.1\|WP_147887020.1\|2273433_2274141_+\|phosphonate-C-P-lyase-system-protein-PhnL	unknown	unknown	gnl\|CDD\|227118
NZ_CP042826.1\|WP_147887010.1\|2256069_2257086_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176222
NZ_CP042826.1\|WP_147887014.1\|2261342_2264048_-\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319775
NZ_CP042826.1\|WP_147887009.1\|2255017_2255989_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP042826.1\|WP_147887019.1\|2271743_2272649_+\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	unknown	unknown	gnl\|CDD\|226154
NZ_CP042826.1\|WP_147887008.1\|2253413_2254967_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP042826.1\|WP_147887016.1\|2269558_2270029_+\|phosphonate-C-P-lyase-system-protein-PhnG	unknown	unknown	gnl\|CDD\|377702
NZ_CP042826.1\|WP_136559871.1\|2272645_2273422_+\|phosphonate-C-P-lyase-system-protein-PhnK	unknown	unknown	gnl\|CDD\|183280
NZ_CP042826.1\|WP_147888862.1\|2257150_2257759_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223477
NZ_CP042826.1\|WP_147887011.1\|2258876_2259776_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP042826.1\|WP_136559866.1\|2268737_2269457_-\|phosphonate-metabolism-transcriptional-regulator-PhnF	unknown	unknown	gnl\|CDD\|131378
NZ_CP042826.1\|WP_136559874.1\|2274873_2275731_+\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226164
NZ_CP042826.1\|WP_136559855.1\|2252326_2253313_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380663
NZ_CP042826.1\|WP_147887021.1\|2274137_2274752_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|132351
NZ_CP042826.1\|WP_147887022.1\|2275808_2276714_+\|phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|132472
NZ_CP042826.1\|WP_147887018.1\|2270640_2271747_+\|carbon-phosphorus-lyase-complex-subunit-PhnI	unknown	unknown	gnl\|CDD\|226153
NZ_CP042826.1\|WP_136559860.1\|2257820_2258753_-\|ring-cleaving-dioxygenase	unknown	unknown	gnl\|CDD\|319935
NZ_CP042826.1\|WP_147887013.1\|2260637_2261327_+\|FCD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224715
NZ_CP042826.1\|WP_147887012.1\|2259793_2260480_-\|C26-family-cysteine-hydrolase-domain-containing-family	unknown	unknown	gnl\|CDD\|153212
NZ_CP042826.1\|WP_147887017.1\|2270028_2270637_+\|phosphonate-C-P-lyase-system-protein-PhnH	unknown	unknown	gnl\|CDD\|236655

Protein	Function_ID	Function_description	E-value
NZ_CP042826.1\|WP_147887020.1\|2273433_2274141_+\|phosphonate-C-P-lyase-system-protein-PhnL	gnl\|CDD\|227118	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.57389e-144
NZ_CP042826.1\|WP_147887010.1\|2256069_2257086_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176222	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	4.58243e-155
NZ_CP042826.1\|WP_147887014.1\|2261342_2264048_-\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319775	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase. This subfamily includes the P-type Na(+)-ATPase of an alkaliphilic bacterium Exiguobacterium aurantiacum Mna and cyanobacterium Synechocystis sp. PCC 6803 PMA1, a cation-transporting ATPase which may translocate calcium. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP042826.1\|WP_147887009.1\|2255017_2255989_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.69866e-87
NZ_CP042826.1\|WP_147887019.1\|2271743_2272649_+\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	gnl\|CDD\|226154	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism].	0
NZ_CP042826.1\|WP_147887008.1\|2253413_2254967_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP042826.1\|WP_147887016.1\|2269558_2270029_+\|phosphonate-C-P-lyase-system-protein-PhnG	gnl\|CDD\|377702	pfam06754, PhnG, Phosphonate metabolism protein PhnG. This family consists of several bacterial phosphonate metabolism protein PhnG sequences. In Escherichia coli, the phn operon encodes proteins responsible for the uptake and breakdown of phosphonates. The exact function of PhnG is unknown, however it is thought likely that along with six other proteins PhnG makes up the the C-P (carbon-phosphorus) lyase.	3.8326e-56
NZ_CP042826.1\|WP_136559871.1\|2272645_2273422_+\|phosphonate-C-P-lyase-system-protein-PhnK	gnl\|CDD\|183280	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional.	0
NZ_CP042826.1\|WP_147888862.1\|2257150_2257759_-\|alpha/beta-hydrolase	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	2.6805e-65
NZ_CP042826.1\|WP_147887011.1\|2258876_2259776_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.45798e-76
NZ_CP042826.1\|WP_136559866.1\|2268737_2269457_-\|phosphonate-metabolism-transcriptional-regulator-PhnF	gnl\|CDD\|131378	TIGR02325, Probable_transcriptional_regulator_PhnF, phosphonates metabolism transcriptional regulator PhnF. All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond. [Transport and binding proteins, Anions, Regulatory functions, DNA interactions].	1.20895e-91
NZ_CP042826.1\|WP_136559874.1\|2274873_2275731_+\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	9.62881e-137
NZ_CP042826.1\|WP_136559855.1\|2252326_2253313_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380663	cd20008, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate-binding protein such as CUT2. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	7.15357e-114
NZ_CP042826.1\|WP_147887021.1\|2274137_2274752_+\|acetyltransferase	gnl\|CDD\|132351	TIGR03308, phn_thr-fam, phosphonate metabolism protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.	2.64709e-115
NZ_CP042826.1\|WP_147887022.1\|2275808_2276714_+\|phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|132472	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein. This model is a subset of the broader subfamily of phosphate/phosphonate binding protein ABC transporter components, TIGR01098. In this model all members of the seed have support from genomic context for association with pathways for the metabolims of phosphonates, particularly the C-P lyase system, GenProp0232. This model includes the characterized phnD gene from E. coli. Note that this model does not identify all phnD-subfamily genes with evident phosphonate context, but all sequences above the trusted context may be inferred to bind phosphonate compounds even in the absence of such context. Furthermore, there is ample evidence to suggest that many other members of the TIGR01098 subfamily have a different primary function.	7.54632e-111
NZ_CP042826.1\|WP_147887018.1\|2270640_2271747_+\|carbon-phosphorus-lyase-complex-subunit-PhnI	gnl\|CDD\|226153	COG3626, PhnI, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism].	0
NZ_CP042826.1\|WP_136559860.1\|2257820_2258753_-\|ring-cleaving-dioxygenase	gnl\|CDD\|319935	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.	1.51885e-53
NZ_CP042826.1\|WP_147887013.1\|2260637_2261327_+\|FCD-domain-containing-protein	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.3423e-40
NZ_CP042826.1\|WP_147887012.1\|2259793_2260480_-\|C26-family-cysteine-hydrolase-domain-containing-family	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	2.07724e-50
NZ_CP042826.1\|WP_147887017.1\|2270028_2270637_+\|phosphonate-C-P-lyase-system-protein-PhnH	gnl\|CDD\|236655	PRK10147, phnH, phosphonate C-P lyase system protein PhnH.	1.33178e-90

>NZ_CP042826.1|WP_147887014.1|2261342_2264048_-|HAD-IC-family-P-type-ATPase
MTDNGDEMAVHALPQEEALRRVGSSSTGIETQEAERRLATYGPNRLVAAPRRGALVRFLAQFHNVLIYVLIASAIVTAFLQHWIDTGVIVAVVLGNSIVGFLQEGRAEDAMNAIRGMLAPRAAVLRDGRRTSVDASDLVPGDVVLIEAGDRVPADVRLLEARSLKLEEAALTGESVPVDKSADPVAIDAALGDRSCMLYSGTLVAAGTGRGVVVATGMLTEIGKISGMLDRVETLSTPLVQQMDVFARWLTLFILIIAALLLAYGLVVEQLPFVELFMIIVGLSVAAIPEGLPAVMTITLAVGVQAMARRNAIVRRLPAIETLGSVSVICTDKTGTLTRNEMVVADLVASRHVYSVDGEGYSPEGAIRWNDADADPGEHAVLAEFARAAGLCNDAVLHSADGAWRVEGDPMEGALMALAGKITGDGGDPFTAGWTRIDAIPFDAAHRYMAVLHLDGDGRRHVHVKGAPEAVLALCAAQRMPDGETAVLDMPYWEQMVERLAAEGQRVLAVAVGAPPTGEQQLMQDHLSGSLTLIGLVGLIDPPRPEAIAAVADCHLAGIRVKMITGDHAATARAIAAMIGLKNCERVLTGADIDRLDDATLSLAASETDIFARTSPAHKLRLVTALQSQGLTVAMTGDGVNDAPALKRADAGIAMGVKGSEAAKEAADLVLADDNFASIAAAVREGRTVYDNIKKVISWTLPTNAGEAATIIIALFAGFALPVTAVQILWINLVTAITLGLALAFEPSEEGTMRRPPRRRDEPLLTAELIWHVGLVSLLFAAAVFGIFFYALDKGHSIELARTMAMNTLVVMEIFHVFFIRNIYGTSLTWRAVRGTMVVWICVISVTIAQFAVTYLPFMQSLFGTESVPLFEGVLIFAIGWVFFALVEIEKQMRLTLRKRG
>NZ_CP042826.1|WP_147887013.1|2260637_2261327_+|FCD-domain-containing-protein
MASEERKVEESLKQRVYRTLRARVMSGAVAPGLPITINGVADDLGVSAMPVREALHRLVADGALEYLDNRRVRVPEMTLSKFEEIIAARTALETLAAIRALPHIDTARLAHLQEIDSQIDEAYAAEDLLRSTELNFLFHRTLYEPGASGVLLDLMESVWLRLGPFMRLATAKLEESYRIDRHAEALDAIRERDPEALSAAIEADIQDGVGHLGRHFLGNGAASPPPSAN
>NZ_CP042826.1|WP_147887012.1|2259793_2260480_-|C26-family-cysteine-hydrolase-domain-containing-family
MTTKTIGILVTGHSPTELTDEYGNYADMFAALLGKFDFAFKRYFVVDGEFPDSPTEVDGWLLTGSKFGVYEEHDWIRRLEDFIRQVHAAKVPMVGICFGHQVMAKALGGEVEKFKGGWSAGPVRYKRSDTGEEQVLLAWHQDQVIRVPEGAEVVGKTDACENAVIRYGDWGLSYQPHPEFSPRFFEGLAEARKAAIPEPLFERVKKVNVPIATDKIAEEIGEFFGRER
>NZ_CP042826.1|WP_147887011.1|2258876_2259776_+|LysR-family-transcriptional-regulator
MGEVEAIRTFLAVAEQNSFSAAARLLAMTPASVTRTVSALEDQLGVQLLLRTTRKVSLTSAGAAYAARVAPLVEGLARATEETRDLQKVTAGSLRVSAPMSLGMKVLPTVLSQFSIMHPRTSVAIELSDRFVDILQENYDLAIRISGPPTDKSTIWRKIRPVSRLLVASPSFLARHGTPKVPEDLTTLECLSYHDQSKTETWELSRPGQVRTIEARGRFSINNGDFLCKLAIAGEGIALLPRFIVDEELRAGKLVEVLPGWNTPEIWLTLYYPPYEQLPLRVATFSDFFEAFIKESWDA
>NZ_CP042826.1|WP_136559860.1|2257820_2258753_-|ring-cleaving-dioxygenase
MLTQIKGLHHVTSMAADAQENNDFFTKTLGLRRVKKTVNFDAPDVYHLYYGDEVGNAGSVMTYFPFANMGKGGRGAGEVSETVFSVPKGTLGFWQERLSKEGVKELGSYSLFGEDRLRFAGPDGDGFALAEVDGDSRVPFAGGPVGVSEGVHGFRGVTMRLRDEGATGELLKFMGYQPVDSQGDFVRYAVTGGNGADYIDLEVLPGASRAQQGAGSVHHVAFAVEDRAAQLEVRKALLDTGYQVTPVIDRDYFWAIYFRTPGGVLFEIATNEPGFNRDEDTAHLGEALKLPTRYQQYRSQIEAQLPPIQD
>NZ_CP042826.1|WP_147888862.1|2257150_2257759_-|alpha/beta-hydrolase
MAIDSYIHLYQAPQGAAPLVFTFHGTGGDEHQFPGLVNRILPEAGIVSPRGDVSEYGAARFFKRTGEGVYDMADLAQRTVQMAAFIRAHKEKSPDRPIYGLGYSNGANIMASVLFEAPDLFDRVILMHPLIPFDPPAQPGLSDVAVLVTAGQRDPICPLPLTKRLAAYFEAQGAQVESFLHQGGHEVSQGEVDAIGAFLQKP
>NZ_CP042826.1|WP_147887010.1|2256069_2257086_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MKAALCVEPGRLEIVDRDPPPRPKTGEARIAISHVGICGTDYHIFEGKHPFLEYPRVMGHEISATVVEAGDGVDLGAGTKVIVNPYIACGTCIACRKDKPNCCTNIRVLGVHTDGAMCEEITVPAVNLYPADDLSPEAAATVEFLAIGAHAVRRSMAPAGSRALVIGAGPIGLGTAIFARIAGHDVTLLDTSSERLSMAADRLGFTSGLLADDSLESAVADLTGGDGFDVVFDATGYRPSMERAFRFVAHGGSLVLVSVVKEDITFSDPEFHKREMMLIGSRNATRVDFDHVRKSIADGLVPIDQLITHRTTLADLAADLPRWAREKSGLIKALIQIG
>NZ_CP042826.1|WP_147887009.1|2255017_2255989_+|ABC-transporter-permease
MSTDTTETKVAPKRGMSILFSLTLLGLLLFLWLLLGFATNSFWSPNNISNLLRQGSMTAILAVGQTFVIITAGIDLSVGAVVGFASVILAWLLAAGLPVWLAIILTLLMGVAIGSFHAFGIVRMGLPAFIITLATLTSLRGIGLLITNGSTISISNEAFTNFARADFLGVPSLFWMVIVVAVPAYIFLHLSRWGRYLFAVGSNSEAARLSGVNVNRTIYMAYILSSTCAAFVGILLASRIGIGNATQAEGWELQAIASSVIGGTSLFGAVGSVQGPLLGAFILATINNGANLMNVNSFWQRIITGALIILIVYFDQLRRRGSR
>NZ_CP042826.1|WP_147887008.1|2253413_2254967_+|ATP-binding-cassette-domain-containing-protein
MTSLHDVSHRHDDAPELLETDRIPPGTPILELIGLQKKYGAVEALKPATVSFLAGEIHAIVGENGAGKSTLIKLLTGVIPRTSGEIRWCGKPVALGTPNEAIQRGINAVHQEVVLCSHLSVAANMFLGDEMSSGGIMRQRAMTTAAQNVLDDLGFNLPAGEILGNLTIGQQQLIATAKAAMRGIRFIIFDEPTAYLTRQESAQLFRLIRRLQSEGVTIVYISHRMEEVFELADRVSVLRDGTHVGTRLIGETNDAELISLMINRSIEQIYHKEKLPIGATILEAKGLSGPGFSDVSLSVRSGEIVGLYGLIGAGRSEFALGLYGRHKLTGGEVFWDGKKVVIDTERKAMDLGIALAPESRRDQGLCLNLPIGLNINLPVFGRLSRGLTISPKLEAGNADKQINDLKIKTPTRAVLASAMSGGNQQKIVIGKWLSHGARLFIFDEPTVGVDVGTKAEIYRLFAELLKQGAGIILISSYLPEVYELSDRLHVFRQGKLVASHDYRTASHEDVLTEAIGV
>NZ_CP042826.1|WP_136559855.1|2252326_2253313_+|ABC-transporter-substrate-binding-protein
MTILKSMTRRALMGIAGAAMMTSMMPAASFAQDVTIPIIVKDTTSFYWQIVLAGARQAGKDLGVSVPELGAQSESDINGQISILENAVAGSPAAVVISPTEFKALGKPIDEAAKAVPIIGIDSGADSQAFTSFLTTDNVQGGRIAADGLAAAIKAATGKEEGEVAIITSLPGVGSLDQRREGFLDQMKTKYPGITVVVDRFADGQATTGLNMMTDLITANPNIVGVFASNLIMAQGVGQAIAENKLGDKIKVIGFDSDEKTVGFLKEGVLAGLVVQDPYRMGYDGVKTALAVSKGEKVETFVDTGANLVTQANMAEPKMDALLNPKVN
>NZ_CP042826.1|WP_136559866.1|2268737_2269457_-|phosphonate-metabolism-transcriptional-regulator-PhnF
MQRQKGVALWRQISDRIRANILAGLYDGTGMVPAETALAQEFGVNRHTVRAALAALQQEGIVRAAQGRGTMITQRDKFDFPIGRRTRFTEGIGEQARDLKAILLSSSREVATSELIGRLQLAQGDEVLRLDGVRKADGRAVSRSTMWFPAERFAGIDKAFAETGSITRALSACGVDDYLRDVTEISAVHAEPDDVAHLELTPGAIVLVTRALNTDAQGRPIQFAVTRFPADRVQFTIRN
>NZ_CP042826.1|WP_147887016.1|2269558_2270029_+|phosphonate-C-P-lyase-system-protein-PhnG
MHTANEIQSGAQTDRKRIVDLLGRATLAELQDALATIEPTPAFTPLRGPETGLVMVKGRIGGGGAPFNLGEATVSRASIRLADGRIGHGYRLGTDRKAASLSAVLEAVTQDDSVRAALEPALLAPLEARLAQEAERLEAETAATKVDFFTMVRGED
>NZ_CP042826.1|WP_147887017.1|2270028_2270637_+|phosphonate-C-P-lyase-system-protein-PhnH
MLEHTESLDGGFPDAVTHAQQVFRSVMDSMARPGTIGLVDVPVAPPAPLGIAAGALLLTLCDHDTPIWVTPGLSKSALPGWIGFHTGASMTGDKSEAKFAFVEVGAPVPSLTQFASGTQEYPDRSTTLVIEVPALEGGQPLQLAGPGIRDTANIAPKGLPETFLRQWSDNRGIFPRGVDVVLTSGRRFVALPRTTKIREMEA
>NZ_CP042826.1|WP_147887018.1|2270640_2271747_+|carbon-phosphorus-lyase-complex-subunit-PhnI
MYVAVKGGEKAIANAHKLLADRRRGDRALPSVTIDQIVAQLGLAVDRVMAEASLYDCALAALALKQARGDMIEAIFLLRAYRTTLPRFGTSRPIETGHMRVERRVSATYKDLPGGQLLGPTFDYTHRLLDPSLLADDAVETGDQREEGLDHVMRVSDILDGEGLIEPDGEMPEDHLAGDITREPMEFPMPRDLRLQALARGDEGFLLALGYSTQRGYGRSHPFVGEIRMGLVEIEFDVPELGFAVSLGEIRVTECQMVNQFKGSAKAPPQFTRGYGLVFGQSERKAMSMSLVDRALRTQEFGENVVAPAQDEEFVISHCDNVQATGFVEHLKLPHYVDFQAELDLVRRMRAKHEARRTEQTDLKEAAE
>NZ_CP042826.1|WP_147887019.1|2271743_2272649_+|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ
MSALATELATYNFAYLDEQTKRMIRRAILKAIAIPGYQVPFASREMPMPYGWGTGGVQVTASIIGRDDTLKVIDQGADDTTNAVSIRAFFQKVAEVAVTTKTSDATIIQTRHRIPEEKLKEGQVLVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDIARHGRIATTYAYPVKVEGRYVMDPSPTPKFDNPKMHMSEALQLFGAGREKRIYAVPPFTEVVSLDFEDHPFEIQTFDKPCALCGAHNVYLDEVVLDDKGGRMFVCSDTDHCETRQADGHVGEMLAQNPKLAKEAAE
>NZ_CP042826.1|WP_136559871.1|2272645_2273422_+|phosphonate-C-P-lyase-system-protein-PhnK
MSDQPLLKVRNLSKFYGNRIGCSNVSFDLWPGEVLAIVGESGSGKTTLLSCLSTRLMPTTGSVDYHMRDGQYRELYHMGEAERRFLMRTDWGFVHQNPADGLRMTVSAGANVGERLMAIGDRHYGKIRQTASEWLERVEISTDRMDDQPRDFSGGMRQRLQIARNLVTGPRLVFMDEPTGGLDVSVQARLLDLVRGLVNDLGLSAIVVTHDLAVARLLSHRMMVMKDGNVIEHGLTDRVLDDPREPYTQLLVSSILQV
>NZ_CP042826.1|WP_147887020.1|2273433_2274141_+|phosphonate-C-P-lyase-system-protein-PhnL
MATPLIVSEVAKSFIMHLRGGLVLPVISNVSFSVAAGECVVLGGPSGIGKSSILKMLYGNYAVDQGQILVDHGGRIVDIASADPRTVLEVRRGTLGYVSQFLRTVPRVSTLDVVAEPLVARGIPAEEARERASELLSRLNLPRDLWQLPPSTFSGGEQQRVNIARGFITDHAVLLLDEPTASLDATNRAVVVSMIRAKKEAGVALLGIFHDEEVREAVADRILDVMQFSPRKAAA
>NZ_CP042826.1|WP_147887021.1|2274137_2274752_+|acetyltransferase
MRKKLGIEPLVHETAQVVNSTLGRYTEVADRCRLEEVEMGDYSYIMQDGSIWCAKVGKFANIAAAVRINATNHPTWRPTLHHFTYRAADYFDDAENDHDFFAWRRENRVVIGHDVWIGHGATVLPGVTVGDGAVIGAGAVVSRDVAPYTIVGGVPARLIRERFPKSVAERMQALAWWDWDHDRLFAALDDFRHIDTEAFLEKYA
>NZ_CP042826.1|WP_136559874.1|2274873_2275731_+|phosphonate-ABC-transporter-ATP-binding-protein
MLFRLDNLTRQFGTNKAVDSVALEIPTGQMVGVIGRSGAGKSTLLRMINRLVDPTSGSIRFGDLEISNLHGAALRNWQRDCAMIFQQFNLVPRLDVLTNVLLGRLNHRSTALSILNVFTREERLMAIAALERLGIEQTALQAAGTLSGGQQQRVAIARALMQSPKMILADEPIASLDPLNAKIVMDALRDINEREGITVITNLHTLDTARNYCERIIGMARGRVVFDGTPAELTAEAVHEIYGADQHGAGIDETMTSTSINIAHQDNEQRKIPSAGLRPLAVAEA
>NZ_CP042826.1|WP_147887022.1|2275808_2276714_+|phosphonate-ABC-transporter-substrate-binding-protein
MLKKTLLATAALVALASGVHAEDLKEFRIGILGGENEADRLRNFQCMTEKLPSVLGVEKVSLFPAADYDGVVQGLLGGTLDYAELGASAFAKVYLAKEDAVEPILTTVQTDGSSGYYSIMVARKDSGITKIEDVKGKKLGYADPDSTSGYLVPLVTLPEALGAPVDQVVASTGFGGGHENLVLEVVKGTFDVGTTWGSGVGDFKDGYSSGNLRKMVDKGVLNMDDLVEVWKSPLIPNGPIVVRTSMNDDMKTKFKQFMVDLPKSDPACFSAVQGGDFSGYTEVNVDFYKPIIDARKATIGG

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Crispr_ID: NZ_CP042826_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042826_3

4511417-4511499

Orphan

Consensus_repeat	Method
AAGAAGGCAGCCCCGAAGAAGAAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042826_3

>merge|NZ_CP042826|3|4511417-4511499|CRISPRCasFinder
AAGAAGGCAGCCCCGAAGAAGAAGGCTGCTGCCAAGGCTGACGACGCTGCCGAAGGCGAAGAAGCAGCACCGAAGAAGAAGGC

>NZ_CP042826|3|3|4511417-4511499|CRISPRCasFinder
AAGAAGGCAGCCCCGAAGAAGAAGGC	TGCTGCCAAGGCTGACGACGCTGCCGAAGGC
GAAGAAGCAGCACCGAAGAAGAAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042826.1\|WP_136558313.1\|4514061_4514241_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
NZ_CP042826.1\|WP_147888700.1\|4501033_4502275_+\|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	unknown	unknown	gnl\|CDD\|225151
NZ_CP042826.1\|WP_147888713.1\|4515140_4516352_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341024
NZ_CP042826.1\|WP_147888702.1\|4503008_4504850_+\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NZ_CP042826.1\|WP_147888707.1\|4509067_4509643_+\|GDYXXLXY-domain-containing-protein	unknown	unknown	gnl\|CDD\|379571
NZ_CP042826.1\|WP_147888709.1\|4511616_4512366_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NZ_CP042826.1\|WP_006728511.1\|4507241_4507388_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP042826.1\|WP_147888705.1\|4506184_4507150_+\|nucleoside-hydrolase	unknown	unknown	gnl\|CDD\|239116
NZ_CP042826.1\|WP_147888701.1\|4502271_4503009_+\|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl\|CDD\|180341
NZ_CP042826.1\|WP_147888703.1\|4504846_4505632_+\|precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl\|CDD\|225430
NZ_CP042826.1\|WP_147888717.1\|4521195_4521915_-\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NZ_CP042826.1\|WP_147888712.1\|4514598_4515105_+\|DUF992-domain-containing-protein	unknown	unknown	gnl\|CDD\|368782
NZ_CP042826.1\|WP_147888714.1\|4516446_4517871_-\|Si-specific-NAD(P)(+)-transhydrogenase	unknown	unknown	gnl\|CDD\|235373
NZ_CP042826.1\|WP_147888706.1\|4507961_4509071_+\|DUF2157-domain-containing-protein	unknown	unknown	gnl\|CDD\|227209
NZ_CP042826.1\|WP_147888704.1\|4505666_4506119_+\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP042826.1\|WP_147888715.1\|4518181_4519321_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224748
NZ_CP042826.1\|WP_147888979.1\|4500399_4501041_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181352
NZ_CP042826.1\|WP_147888710.1\|4512449_4513934_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|225107
NZ_CP042826.1\|WP_147888711.1\|4514278_4514602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042826.1\|WP_147888716.1\|4520330_4521155_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576

Protein	Function_ID	Function_description	E-value
NZ_CP042826.1\|WP_136558313.1\|4514061_4514241_+\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	4.22047e-10
NZ_CP042826.1\|WP_147888700.1\|4501033_4502275_+\|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	gnl\|CDD\|225151	COG2242, CobL, Precorrin-6B methylase 2 [Coenzyme metabolism].	5.82008e-73
NZ_CP042826.1\|WP_147888702.1\|4503008_4504850_+\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	4.31496e-123
NZ_CP042826.1\|WP_147888707.1\|4509067_4509643_+\|GDYXXLXY-domain-containing-protein	gnl\|CDD\|379571	pfam14345, GDYXXLXY, GDYXXLXY protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 171 and 199 amino acids in length. It contains a conserved GDYXXLXY motif.	2.50158e-40
NZ_CP042826.1\|WP_147888709.1\|4511616_4512366_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	5.00357e-13
NZ_CP042826.1\|WP_006728511.1\|4507241_4507388_-\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	3.42608e-09
NZ_CP042826.1\|WP_147888705.1\|4506184_4507150_+\|nucleoside-hydrolase	gnl\|CDD\|239116	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. .	6.32257e-127
NZ_CP042826.1\|WP_147888701.1\|4502271_4503009_+\|precorrin-2-C(20)-methyltransferase	gnl\|CDD\|180341	PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed.	2.31975e-90
NZ_CP042826.1\|WP_147888703.1\|4504846_4505632_+\|precorrin-4-C(11)-methyltransferase	gnl\|CDD\|225430	COG2875, CobM, Precorrin-4 methylase [Coenzyme metabolism].	4.85724e-123
NZ_CP042826.1\|WP_147888717.1\|4521195_4521915_-\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	1.2422e-114
NZ_CP042826.1\|WP_147888712.1\|4514598_4515105_+\|DUF992-domain-containing-protein	gnl\|CDD\|368782	pfam06186, DUF992, Protein of unknown function (DUF992). This family consists of several hypothetical bacterial proteins of unknown function.	7.46358e-51
NZ_CP042826.1\|WP_147888714.1\|4516446_4517871_-\|Si-specific-NAD(P)(+)-transhydrogenase	gnl\|CDD\|235373	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase.	0
NZ_CP042826.1\|WP_147888706.1\|4507961_4509071_+\|DUF2157-domain-containing-protein	gnl\|CDD\|227209	COG4872, COG4872, Predicted membrane protein [Function unknown].	1.80003e-44
NZ_CP042826.1\|WP_147888704.1\|4505666_4506119_+\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	4.86247e-29
NZ_CP042826.1\|WP_147888715.1\|4518181_4519321_+\|acyltransferase-family-protein	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	4.61848e-50
NZ_CP042826.1\|WP_147888979.1\|4500399_4501041_+\|precorrin-8X-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	7.59977e-113
NZ_CP042826.1\|WP_147888710.1\|4512449_4513934_+\|PAS-domain-S-box-protein	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.47574e-20
NZ_CP042826.1\|WP_147888713.1\|4515140_4516352_-\|MFS-transporter	gnl\|CDD\|341024	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters. This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.53192e-49
NZ_CP042826.1\|WP_147888716.1\|4520330_4521155_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	3.15254e-158

>NZ_CP042826.1|WP_147888707.1|4509067_4509643_+|GDYXXLXY-domain-containing-protein
MIAAKPFAAVALFIAIVQTAILGYMIEGRASILRSGTEVLLKTAPVDPRDLLRGDYVILTYDISTISTTSITGTRPETGEVARLHVRLKPGADGFWMVSAASFDPLIEEDGSVVLLTQPVTIYDWEWQNAGNLAVSYGIERFYVPEGEGRPIEDGRNQGRVSVAVRVSADGQAQIRALMLDNEPLYEEPLY
>NZ_CP042826.1|WP_147888706.1|4507961_4509071_+|DUF2157-domain-containing-protein
MYRGRLKRDLDDWVGRGLIDAATAGRLLEDVDRRGARFSIGGVLSMFAALLIAASLLMLIAANWELIPRLVKVIGIIGLIWIFHAVGAVARLRGADRIAAGSLVLGSAAFGGAIALIGQLYHLSGDTFSAMFLWFTVTAVSAVLFRSGALAIVAGALSLVTFGGGFDSFGWDIGSHGVWAWWPPFGAAVVFGLSHRTGANRAKHFGYVLLVTWIWWMTILDRGEVYAFGVAIAATLIFLALTVPRSPLAAIHRKLGASGSFYALLLALSGFAYVQGSAVGAVSIAVLSVIILALSIAAIALDGRDNGAVRFLAYGAFAAEVLYLSYETIDSILGTSAFFLLAGLVVAILAFIVIRLEKRFSRPVAEVTP
>NZ_CP042826.1|WP_006728511.1|4507241_4507388_-|DUF1127-domain-containing-protein
MNIARSLNNWRKYRQTITELGRMSDRELRDLGIGREDIRRVARHAVNG
>NZ_CP042826.1|WP_147888705.1|4506184_4507150_+|nucleoside-hydrolase
MHKVIFDTDPGVDDAMALLFLHHHPDIDLLGITTVFGNAEIDITTRNALFLKREWKIDAPVARGAGETFIPHRVSHEPPKFIHGDDGLGNIGVPEVTDVHADPRPAHRFIVETVRANPGEVTIVAVGRMTNLANALKEDPELVGLVKEIVIMGGAFDVNGNVTPAAEANIHGDPEAADVVMTAKWPVVVVGLDVTMQTVMTRTQLADIRDAAGTSRARLLFDLSQFYIDFYEGLVDDGMVVHDSCACVYVVAPELFKTRSGVIRVVCGGIADGQTIQKPDGRGFGPSDWDGDLPSQKICTGIDAPAVLKLIHDVIVAVRED
>NZ_CP042826.1|WP_147888704.1|4505666_4506119_+|GFA-family-protein
MEGVDEDRGSCRCGQVTLKVKSRPLMTMACHCKGCQRMTASAYSLSALFPDDCVEITGLVPVIGGMHGELRHHFCPQCLSWIFTRAEMMGPLINIRATMLDSTAELAPFIETCVAEKLPWVTVPARHSYAQFPLMEDFPKLMGEFAETCA
>NZ_CP042826.1|WP_147888703.1|4504846_4505632_+|precorrin-4-C(11)-methyltransferase
MTVYFIGAGPGAPDLITVRGLRLIERCPVCLYAGSLVPEEIVEAAPEGAIVKDTAPMHLDEIVADMVAAHERGEDVARVHSGDPSIYGAIAEQMRRLDAAGIPYDVVPGVPAFAATAARLKTELTLPEIAQTVIVTRTEMKASSMPEFETLEILGRSRATLAIHLSIRNLTHIRDTLTPYYGEDCPVVVAYRSTWPDELFIRTTLKDMAEEVRRAKITRTALIMVGKVFGHVEFRDSDLYNSDFSHVLRNVGKKKKVAKTG
>NZ_CP042826.1|WP_147888702.1|4503008_4504850_+|precorrin-3B-C(17)-methyltransferase
MAAASATPAIPAVVILNEAAAPLGRRIAAVISGELHGAVARVTSADVLFPSVKDHVQALFSAGRPIVAVMASGALIRLLAPLLCDKQTESPVIVVAEDGSSVVPLLGGHHGANDLARSIATSLGAHAAITTAGDLKFGVALDQPPEGYVLANSNAAKAVMAELVAGAGVRLDASSAAWLTQSRLPFEQEARVTLTVTDQNKTAGELELVYHPKTLVLGMGCERHAKPAEAITLAEEALTKGGFARQSLAAVCSIDLKADETAIHAVAAHFGVPARFFTAATLEAEAPRLKNPSEVVFAEVGCHGVAEGAALAAVGQTGALVVEKIKSKGATAAIAQATEIVDPTTLGRARGTLFVVGIGPGSDDWRSPEVSRMVQASTDLVGYSLYLDLLGPLADGKVRHDFGLGKEEARVVHAMEMAGQGNTVALVCSGDAGIYAMATLVFELFDKGGITDGASRIEVQVSPGISALQAAAARIGAPLGHDFCTISLSDLLTPWEHIQRRVKAAGEGDFVIAFYNPVSMKRRTQLAYARDELLKYRPATTPVILATNLGREGEHVRTVPLGELNVDDVDMLTVVVVGSSESRTVTTGDGKTWVYTPRGYSGKADTGMKGNEA
>NZ_CP042826.1|WP_147888701.1|4502271_4503009_+|precorrin-2-C(20)-methyltransferase
MTGKLYGLGLGPGDPELLTLKAHRILMRCPVVAYPAPDTGPSFARQIAAPYLTTAQLEVPIIVPMRVERFPAQDIYTKAAETLSRHLDAGADVAVLCEGDPFFYGSFMYLFERLADRYPTEVVPGVSSMMAAAAGLGRPLAARNDVLTVLPGPLPDEELAARIEASGAVAIIKLGRHFARIRALIESLGLTAQAGYAERVSLAEQKLVPLAEVADDTAPYFSMILIYKGEERWHPALAKTLGSGV
>NZ_CP042826.1|WP_147888700.1|4501033_4502275_+|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE
MSDALHGPWLTIIGIGDNGLESLTPEAQAVVWQAETLVIGERLDAVIDGSSLPDLKRILTWGAGFRETLAEILKLRGTPVTVLATGDPMHFGIGATLRRYVAAEEMFVLPSPSAFSLAAARLGWPLQSVTQISLHGRPLAFLNRHVMPRARILVLTSDASTVQTAAVVLAERGFGASVLHVLEHMGGTKERLLRMTALEMAETCPVISDFNTLAIDCAWDGPLLAPVPGLPDEAFRHDGQLTKREIRAATLAQLAPFPNARLWDVGAGCGSIAIEWMRSGMGARAIAIETKPERLAMIRENAETLGVPDLDVVEGEAPAVLAGLKTPDVIFIGGGISGEGLFEACWAALPPGGRLVANAVTIEGEARLVELRSRHGGDLARIQVARAAPVGRYCGWKSLMPVTMWTVVKGEVE
>NZ_CP042826.1|WP_147888979.1|4500399_4501041_+|precorrin-8X-methylmutase
MELLDYIRDPAEIYRQSFATIRAEADLDRFPSVIQPLVIRLIHACGMVDLADDIAYSDSAFEAGAAALEKGAPVLVDVEMVRHGVIRRLMPAENEILCLLNDERVRPKADEIGNTRSAAQVDLWDEHLSGAVVAIGNAPTALFRLLERIDAGAPKPAIILGMPVGFVGAAESKDALIADSRGIPYIAVRGRRGGSAMASAAVNALAGGLGTNV
>NZ_CP042826.1|WP_147888709.1|4511616_4512366_+|MBL-fold-metallo-hydrolase
MQIRLIRSATLTVELAEIRLLIDPWLAGKGEGRSYSGRGPSPLVDLPVPISELLQGIDAVLISHLHSDHFDETAQQVLPKSTPILCHARDRVAIQRIGFDDVRAIGDGLTLGAVNIRTTEGRHGPPDVLDDMGEVSGFLISAAGEPTLYWAGDTILCPEVEAVLADERLQVVVVHGCGAIWNGKGPLVMDLAMLARTLELVDPVHVVVTHLDAVDHATVSRSDIVTAAETWPGPARLHVPSDGETLSFE
>NZ_CP042826.1|WP_147888710.1|4512449_4513934_+|PAS-domain-S-box-protein
MTDVDQAPKINRAVLQQVIAGLSDGLILVETDGSIAWANQSALDMHRIEAIDELGGDVAGYRRRFTLRYRNKHRLDEGQYPLERLLAGEMVEDITVEVSPATDEDVIWIHTLRSLVIEDAGARPDVLVLVLRDETPRYEAEKRFESAFNANPAPGLICRLEDQRFIRVNQGFMEMTGLAREDVIGRTVEEIGLFSNCETGEDATEKLAEGRLIRQREALIPIPGSDRLVIVAGEPIPVGEEACMLFTFADLDGRRRAQNALRQSEERFSKSFRLSPAPTAISRLHDFVFTEVNEAFLQLCGRKAEEVIGKTAAELGLWEDVKLRRALEQKLKDNTPVRDEALTMRLKDGGMAECLVAAERVEIADQQCVIWAMQDVTERRRTEDELIQAIESVMADTSWFSRTVVDRLATLRQSSRGKPSTAQLQDLSERETEILSLICQGLSDAEMGDVLHLSKHTIRNHVASLYAKIGVNRRAAAVIWARERGFLGEQPKRR
>NZ_CP042826.1|WP_136558313.1|4514061_4514241_+|CsbD-family-protein
MDKNRIEGAVRQVKGSVKEAAGKISGNRQLEVEGKSDKLAGEAQSALGKAKDNVKDALR
>NZ_CP042826.1|WP_147888711.1|4514278_4514602_+|hypothetical-protein
MMDLQCVPAGSLAGRWVHLDLPKAVEALIEPAGRDARSNLRVAEDSGDLRITGDAACMDAFETIVALAEVYSGRRVVAELTIRPHLRVRSSSAGTGALITDFERKLS
>NZ_CP042826.1|WP_147888712.1|4514598_4515105_+|DUF992-domain-containing-protein
MKKLVTLALAATVVSSSMALAADSRKQASATETGKAQRVGTLSCEIEGGVGLLVTSSRAVDCQFRGSDGEVERYTGSIGRLGLDVGVTGKTYMSWIVVNTEASRIGDGALAGSYVGASANAALGVGLGANALIGGNAKNFGLQPLSAQAGTGLNLAAGVTRLQLQKAR
>NZ_CP042826.1|WP_147888713.1|4515140_4516352_-|MFS-transporter
MSSSFSQIAARPQLVILSIMIFVQGCAYGATLPYLGVTAIGALGMSNQAYSALTVVASIMTVAISVSLGILSDGMGDRRRMIALLALAGTIGYGAIFLLPTIPVFVIATALIIPFAQAVHSLLFASARIETSALSPRDAAAVNTIVRSFLSASWVVMPAILGLALAQSANMIGAWGAAATCTLLIAIGSLLLLAPPRERTEATGTTGAAFFDALREFVRAEMLIRMVAMAAVTGTTRLAMMIWPLILTLELGGSTRDVGFIAALIALIEIPFMLIAATLLKRVSLLALIIVSALLYGLHMVGFAFATAPWHFYALAVPGAATAAGLLSLPITYFQDLFPTRLGLGTAFMPINSFLGNAVSAGTFAIGSHYLGYSGTAWLGLALALTGVAGLLLVENASLRKRA
>NZ_CP042826.1|WP_147888714.1|4516446_4517871_-|Si-specific-NAD(P)(+)-transhydrogenase
MNQYDFVVIGSGPAGRRAAIQAAKLEKKVLVIEKGTRVGGVSVHTGTIPSKTLRETALNLTGWRERGFYGRSYRVKQEINADDLRRRLLITLDHEVEVLEHQFSRNRVQQMRGTARFINAHTIEVTKEDGEVLQVQAGSVLLAVGTRPFKPSHIPFDGVSVIDSDEILEIKELPRSMIVIGAGVIGIEYATIFSALDTVVTVVEPRDTMLDFIDKEIVEDFTYQLRDRNMKLIFGQTVEGVEKVDGKCRVTLKNGRVLTSEMVLFAAGRVGAVDSLNLEAAGLEADNRGRLKVNPETFQTAVPTIYAAGDVVGFPSLASTSMEQGRIAARHAVGAPSHEPPQFFPYGIYAVPEISTCGLTEEEVIQRAIPYETGIAHFRETSRGHIMGLDSGMLKMIFSLKTRRLLGVHIVGEGATELVHIGQAVLNLKGTVEYFVENTFNYPTLAEAYKIAGLDAWNRMGELKVEKIERRAAE
>NZ_CP042826.1|WP_147888715.1|4518181_4519321_+|acyltransferase-family-protein
MHEMTKESVSGTVRNYRSDIDGLRALAVVAVIIFHYFPTWLPGGLVGVDIFFVISGYLISGHIVQQMQTDRFSLLDFYSRRVRRIFPALIVVLIFSLCFGWMVMSVYAFGLLGKHVAGGADFVANLVLWAERGGGEGESNFDPMLHLWSLGVEEQFYILWPLVAWFAWRRGMNVLGTIAMVAFLSMIANLVIVNIDRVSAFYLPVSRFWELLAGAALVEVERQYGNMPNALTPFAAVTGLILLGLSFALIRVEQAFPGVIALAPVAGAVLVIAAGRDIAVKRLVFSNRFAIAIGLISYPLYLWHWPLVSFAYVIEGGTPDKGIRIALLALAFVLAALTYFLIEKPIRFGMFKRSQVALPLCAAMAITGLCGIGIYVWAG
>NZ_CP042826.1|WP_147888716.1|4520330_4521155_-|type-I-methionyl-aminopeptidase
MVTYIDAASAPLKNTGAIRLYGAEDFEGMRCACQLTARCLDALVPMVKPGVTTAAIDRFVFEFGADHGALPATLNYRGYKYSVCTSINHVVCHGMPDDKPLRDGDIVNIDVTFLLDGWHGDSSRMYPVGNIKRAAERLMEVTYECLMRGIGAVRPGARTGAIGEAIQTYAEAERCTVVRDFCGHGVGRLFHDSPNILHYGKANEGPELREGMIFTIEPMINLGKPHVKVLSDGWTAVTRDRSLTAQYEHTVGVTSEGCEIFTLSPAGLDRPGLG
>NZ_CP042826.1|WP_147888717.1|4521195_4521915_-|DNA/RNA-nuclease-SfsA
MIFSPPLIPAKLVRRYKRFLFDALLDDGTEITGFCPNTGSMRGLTEPGSRIWLSRHDAATRKYAHALELVEADGTVVGVNTALPNRLAEEAILAGLVPPLADFAALKREQRYGRNSRIDILLDDETRGSVHVEVKNVHFIRETGLAEFPDSVTTRGAKHLDEMGDLVETGKRAAMLFMIQRADCDRLKICADLDPSYGRAFARAIARGVEAYAVRCHLDPVKIVPESLIPIDEAGLGRL

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042826_2	2.1\|2264961\|25\|NZ_CP042826\|CRISPRCasFinder	2264961-2264985	25	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	863764-863788	4	0.84
NZ_CP042826_3	3.1\|4511443\|31\|NZ_CP042826\|CRISPRCasFinder	4511443-4511473	31	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	382029-382059	6	0.806
NZ_CP042826_3	3.1\|4511443\|31\|NZ_CP042826\|CRISPRCasFinder	4511443-4511473	31	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	655523-655553	6	0.806
NZ_CP042826_3	3.1\|4511443\|31\|NZ_CP042826\|CRISPRCasFinder	4511443-4511473	31	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	571664-571694	6	0.806
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	MK804891	Aeromonas phage 2_D05, complete genome	40913-40945	7	0.788
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	MK804892	Aeromonas phage 4_D05, complete genome	40279-40311	7	0.788
NZ_CP042826_3	3.1\|4511443\|31\|NZ_CP042826\|CRISPRCasFinder	4511443-4511473	31	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	284006-284036	8	0.742
NZ_CP042826_3	3.1\|4511443\|31\|NZ_CP042826\|CRISPRCasFinder	4511443-4511473	31	MH616765	Inoviridae sp. isolate ctcf1, complete genome	4411-4441	9	0.71
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	MG962374	Mycobacterium phage Paola, complete genome	586-618	10	0.697
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	KX636165	Mycobacterium phage Gengar, complete genome	611-643	10	0.697
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	MF185720	Mycobacterium phage Guillsminger, complete genome	586-618	10	0.697
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	NC_024366	Mycobacterium phage OkiRoe, complete genome	586-618	10	0.697
NZ_CP042826_1	1.1\|1837070\|33\|NZ_CP042826\|CRISPRCasFinder	1837070-1837102	33	MH651171	Mycobacterium phage Collard, complete genome	585-617	10	0.697

1. spacer 2.1|2264961|25|NZ_CP042826|CRISPRCasFinder matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gacgcagatcgccgctttaagcccc	CRISPR spacer
agcgcagatcgccgccttgagcccc	Protospacer
..*************.**.******

2. spacer 3.1|4511443|31|NZ_CP042826|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.806

tgctgccaaggctgacgacgctgccgaaggc	CRISPR spacer
ccgggccaaggctgacgacgaagccgaaggc	Protospacer
.   ****************  *********

3. spacer 3.1|4511443|31|NZ_CP042826|CRISPRCasFinder matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.806

tgctgccaa--ggctgacgacgctgccgaaggc	CRISPR spacer
--ccacgaagcggctgacgacgctgccgacggc	Protospacer
  *..* **  ****************** ***

4. spacer 3.1|4511443|31|NZ_CP042826|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.806

tgctgccaa--ggctgacgacgctgccgaaggc	CRISPR spacer
--ccacgaagcggctgacgacgctgccgacggc	Protospacer
  *..* **  ****************** ***

5. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to MK804891 (Aeromonas phage 2_D05, complete genome) position: , mismatch: 7, identity: 0.788

aggagtttccgggccgacgtcggtgctggcatc-	CRISPR spacer
acttatttccgggtcgaggtcggtgctgg-atca	Protospacer
*   .********.*** *********** ***

6. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to MK804892 (Aeromonas phage 4_D05, complete genome) position: , mismatch: 7, identity: 0.788

aggagtttccgggccgacgtcggtgctggcatc-	CRISPR spacer
acttatttccgggtcgaggtcggtgctgg-atca	Protospacer
*   .********.*** *********** ***

7. spacer 3.1|4511443|31|NZ_CP042826|CRISPRCasFinder matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 8, identity: 0.742

tgctgccaaggctgacgacgctgccgaaggc	CRISPR spacer
tcgcgccaaggctgaggacgatgccgaaaca	Protospacer
*  .*********** **** *******.

8. spacer 3.1|4511443|31|NZ_CP042826|CRISPRCasFinder matches to MH616765 (Inoviridae sp. isolate ctcf1, complete genome) position: , mismatch: 9, identity: 0.71

tgctgccaaggctgacgacgctgccgaaggc	CRISPR spacer
agctgccaaggctgccgatgctgctaatact	Protospacer
 ************* ***.*****..* . .

9. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to MG962374 (Mycobacterium phage Paola, complete genome) position: , mismatch: 10, identity: 0.697

aggagtttccgggccgacgtcggtgctggcatc	CRISPR spacer
ctcggtgtccgggccgacgtcggtgatgatcgc	Protospacer
   .** ****************** **..  *

10. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to KX636165 (Mycobacterium phage Gengar, complete genome) position: , mismatch: 10, identity: 0.697

aggagtttccgggccgacgtcggtgctggcatc	CRISPR spacer
ctcggtgtccgggccgacgtcggtgatgatcgc	Protospacer
   .** ****************** **..  *

11. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to MF185720 (Mycobacterium phage Guillsminger, complete genome) position: , mismatch: 10, identity: 0.697

aggagtttccgggccgacgtcggtgctggcatc	CRISPR spacer
ctcggtgtccgggccgacgtcggtgatgatcgc	Protospacer
   .** ****************** **..  *

12. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to NC_024366 (Mycobacterium phage OkiRoe, complete genome) position: , mismatch: 10, identity: 0.697

aggagtttccgggccgacgtcggtgctggcatc	CRISPR spacer
ctcggtgtccgggccgacgtcggtgatgatcgc	Protospacer
   .** ****************** **..  *

13. spacer 1.1|1837070|33|NZ_CP042826|CRISPRCasFinder matches to MH651171 (Mycobacterium phage Collard, complete genome) position: , mismatch: 10, identity: 0.697

aggagtttccgggccgacgtcggtgctggcatc	CRISPR spacer
ctcggtgtccgggccgacgtcggtgatgatcgc	Protospacer
   .** ****************** **..  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

76972 : 145895

uncultured_Mediterranean_phage(41.67%)

integrase,tRNA,holin,terminase,transposase

attL 83132:83177|attR 93183:93228

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885412.1\|76972_78025_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-26	34.5
WP_136558193.1\|78017_78932_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA
WP_147885413.1\|79150_80149_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_147885414.1\|81153_82608_+	cobyric acid synthase	NA	NA	NA	NA
83132:83177	attL	NA	NA	NA	NA
WP_147885415.1\|83337_84678_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_147885416.1\|84674_85283_+	hypothetical protein	NA	NA	NA	NA
WP_147885417.1\|85584_86199_+	hypothetical protein	NA	NA	NA	NA
WP_147885418.1\|86192_87683_+	hypothetical protein	NA	NA	NA	NA
WP_147885419.1\|88119_88812_+	hypothetical protein	NA	NA	NA	NA
WP_147885420.1\|89208_89592_+	hypothetical protein	NA	NA	NA	NA
WP_147885421.1\|89743_90487_+\|terminase	terminase	NA	NA	NA	NA
WP_147885422.1\|90480_91185_+	hypothetical protein	NA	NA	NA	NA
WP_147885423.1\|91199_91916_+	hypothetical protein	NA	NA	NA	NA
WP_147885424.1\|91928_92438_+	hypothetical protein	NA	NA	NA	NA
WP_147885425.1\|92447_92948_-	hypothetical protein	NA	NA	NA	NA
WP_136558190.1\|93443_94190_+	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
93183:93228	attR	NA	NA	NA	NA
WP_147885426.1\|94231_95194_+	AEC family transporter	NA	NA	NA	NA
WP_147885427.1\|95170_96376_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA
WP_147885428.1\|96566_97295_+\|holin	phosphatidylcholine/phosphatidylserine synthase	NA	NA	NA	NA
WP_147885429.1\|97412_99008_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	5.6e-19	29.7
WP_147885430.1\|98997_100089_+	ABC transporter permease	NA	NA	NA	NA
WP_136558184.1\|100085_101006_+	ABC transporter permease	NA	NA	NA	NA
WP_147885431.1\|101045_102119_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_147885432.1\|102269_103022_+	FCD domain-containing protein	NA	NA	NA	NA
WP_147885433.1\|103094_104456_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	7.3e-20	30.8
WP_147885434.1\|104595_106422_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	7.8e-110	40.0
WP_147885435.1\|106524_107253_+	DUF502 domain-containing protein	NA	NA	NA	NA
WP_147885436.1\|107264_109370_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_147885437.1\|109465_109780_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA
WP_147885438.1\|109783_113293_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_147885439.1\|113326_114262_-	EamA family transporter	NA	NA	NA	NA
WP_147885440.1\|114319_114991_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_147885441.1\|115089_116955_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_147885442.1\|117167_117803_+	invasion associated locus B family protein	NA	NA	NA	NA
WP_136558170.1\|117884_118214_-	heat shock protein HspQ	NA	NA	NA	NA
WP_147885443.1\|118301_119222_-	EamA family transporter	NA	NA	NA	NA
WP_136558168.1\|119374_120784_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_006727717.1\|120846_121185_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_147885444.1\|121536_123012_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_147885445.1\|123045_124761_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_147885446.1\|124858_125662_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_147885447.1\|125756_128678_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	60.8
WP_147885448.1\|128946_129480_+	single-stranded DNA-binding protein	A0A0K1LLZ9	Caulobacter_phage	4.0e-46	76.7
WP_147888759.1\|129564_130800_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_136558160.1\|130852_131482_-	MarC family protein	NA	NA	NA	NA
WP_147885449.1\|131677_134488_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.4e-97	30.9
WP_147885450.1\|135457_135952_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	6.7e-24	35.7
WP_147885451.1\|135980_136550_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	3.2e-46	54.8
WP_147885452.1\|136589_137099_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	7.1e-45	57.5
WP_147885453.1\|137190_138285_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_147885454.1\|138288_139419_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.5e-103	53.5
WP_147885455.1\|139460_139895_-	DUF4864 domain-containing protein	NA	NA	NA	NA
WP_147885456.1\|140265_141021_+	hypothetical protein	NA	NA	NA	NA
WP_147884900.1\|141239_142613_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_147885457.1\|142810_143566_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_147885458.1\|143813_144779_+	ABC transporter	NA	NA	NA	NA
WP_147885459.1\|144878_145895_+\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.1e-28	40.5

DBSCAN-SWA_2

864312 : 902405

Pseudomonas_phage(10.0%)

integrase,protease,transposase

attL 862470:862485|attR 887568:887583

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
862470:862485	attL	NA	NA	NA	NA
WP_147885997.1\|864312_865785_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_147885998.1\|865894_866245_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	6.5e-05	51.1
WP_147885999.1\|866241_866586_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	6.6e-10	31.6
WP_147886000.1\|866659_868252_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.9e-51	33.6
WP_147886001.1\|869185_870130_-	hypothetical protein	NA	NA	NA	NA
WP_147886002.1\|870275_871280_-	restriction endonuclease	NA	NA	NA	NA
WP_147884980.1\|871291_872451_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-18	32.6
WP_147886003.1\|872644_875512_-	NACHT domain-containing protein	NA	NA	NA	NA
WP_147886004.1\|875613_876048_+\|integrase	integrase arm-type DNA-binding domain-containing protein	E5AGD0	Erwinia_phage	1.2e-05	38.0
WP_147886005.1\|876329_878957_+	hypothetical protein	NA	NA	NA	NA
WP_147886006.1\|878949_880152_+	hypothetical protein	NA	NA	NA	NA
WP_147886007.1\|880435_881434_-	ATP-binding cassette domain-containing protein	A0A1V0SBM3	Catovirus	8.0e-08	26.1
WP_147886008.1\|881445_882270_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_147886009.1\|882281_883154_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_147886010.1\|883190_884465_-	D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit	NA	NA	NA	NA
WP_147888796.1\|884466_885375_-	sugar kinase	NA	NA	NA	NA
WP_147888797.1\|885833_887087_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_147886011.1\|887217_887988_+	L-iditol 2-dehydrogenase	A0A0N9R355	Chrysochromulina_ericina_virus	5.4e-12	23.7
887568:887583	attR	NA	NA	NA	NA
WP_147886012.1\|888004_889018_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_147888798.1\|889118_890138_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147886013.1\|890259_891501_-	hydantoinase/carbamoylase family amidase	NA	NA	NA	NA
WP_147886014.1\|891512_892157_-	TenA family transcriptional regulator	NA	NA	NA	NA
WP_147886015.1\|892158_893001_-	BtpA/SgcQ family protein	NA	NA	NA	NA
WP_147886016.1\|893026_893938_+	ribokinase	NA	NA	NA	NA
WP_147886017.1\|893965_894736_-	cytoplasmic protein	NA	NA	NA	NA
WP_147886018.1\|894765_895830_-	phosphotriesterase	NA	NA	NA	NA
WP_147886019.1\|895836_896838_-	ABC transporter permease	NA	NA	NA	NA
WP_147886020.1\|896834_897653_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.2e-11	32.3
WP_147886021.1\|897649_898600_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147886022.1\|898636_899659_-	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	1.2e-35	31.2
WP_147888799.1\|900537_900681_+	hypothetical protein	NA	NA	NA	NA
WP_147886023.1\|900815_901319_+	hypothetical protein	NA	NA	NA	NA
WP_147886024.1\|901401_901746_+	hypothetical protein	NA	NA	NA	NA
WP_136557882.1\|901820_902405_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.3e-29	39.5

DBSCAN-SWA_3

3883511 : 3913582

Pseudomonas_phage(22.22%)

capsid,portal,head,tail,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147888236.1\|3883511_3884894_+\|transposase	transposase	NA	NA	NA	NA
WP_147888237.1\|3885128_3885878_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_147888238.1\|3886008_3886479_-	hypothetical protein	NA	NA	NA	NA
WP_147888952.1\|3886663_3887761_-	diguanylate cyclase	NA	NA	NA	NA
WP_147888239.1\|3888153_3890403_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_147888953.1\|3890684_3891149_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_147888240.1\|3891473_3891755_-	XRE family transcriptional regulator	A0A2D1GR59	Pseudomonas_phage	2.3e-13	46.3
WP_147888241.1\|3891751_3892081_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_147888242.1\|3892180_3892663_-	hypothetical protein	NA	NA	NA	NA
WP_147888954.1\|3892724_3895325_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	5.2e-83	32.7
WP_136559077.1\|3895495_3895939_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_147888955.1\|3896014_3896215_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_147888243.1\|3896361_3896712_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_147888956.1\|3896905_3898084_+	diguanylate cyclase	NA	NA	NA	NA
WP_147888244.1\|3898444_3898936_+	hypothetical protein	NA	NA	NA	NA
WP_147888245.1\|3899141_3899564_+	VOC family protein	NA	NA	NA	NA
WP_147888957.1\|3899937_3901197_+	DNA-packaging protein	A0A0U4IJ26	Arthrobacter_phage	1.9e-67	41.0
WP_147888246.1\|3901756_3902377_+	hypothetical protein	R9U4A9	Rhizobium_phage	1.6e-38	47.4
WP_147888247.1\|3902453_3902759_+	Dabb family protein	NA	NA	NA	NA
WP_136558900.1\|3902771_3903170_-	hypothetical protein	NA	NA	NA	NA
WP_147888248.1\|3903174_3903405_-	hypothetical protein	NA	NA	NA	NA
WP_147888249.1\|3903450_3904623_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	3.8e-65	38.6
WP_147888250.1\|3904824_3905733_+	hypothetical protein	NA	NA	NA	NA
WP_147888251.1\|3905745_3906315_+	alpha-ketoglutarate-dependent dioxygenase AlkB	H2EFG4	Moumouvirus	6.6e-23	34.1
WP_147888252.1\|3906549_3906837_+	hypothetical protein	NA	NA	NA	NA
WP_147888253.1\|3907040_3907616_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.5e-27	46.9
WP_147888254.1\|3907621_3908953_+\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	5.0e-82	45.9
WP_147888255.1\|3909155_3909725_+	hypothetical protein	NA	NA	NA	NA
WP_147888256.1\|3909727_3910063_+\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	1.2e-05	32.3
WP_147888257.1\|3910307_3910706_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_147888258.1\|3910799_3911156_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_147888259.1\|3911097_3911595_+	HEPN domain-containing protein	NA	NA	NA	NA
WP_147888260.1\|3911591_3912788_-	MFS transporter	NA	NA	NA	NA
WP_147888261.1\|3913174_3913582_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA

DBSCAN-SWA_4

4439526 : 4448754

uncultured_Mediterranean_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147888977.1\|4439526_4440324_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.7e-35	38.3
WP_147888647.1\|4440331_4441066_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	8.4e-39	48.8
WP_147888648.1\|4441155_4442283_+	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	6.7e-11	30.7
WP_136558384.1\|4442295_4442523_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	2.6e-07	55.6
WP_147888649.1\|4442636_4443377_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_147888650.1\|4443373_4444195_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	5.7e-44	41.6
WP_147888651.1\|4444300_4445584_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.8e-100	47.0
WP_147888652.1\|4445606_4446377_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.7e-27	32.5
WP_147888653.1\|4446373_4447027_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1J0MC50	Streptomyces_phage	5.6e-10	33.6
WP_147888654.1\|4447206_4448754_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0Y0AH42	Bacillus_phage	1.8e-06	32.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP042825

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 13002

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884746.1\|1540_2758_+	cytochrome P450	NA	NA	NA	NA
WP_147884747.1\|2838_3948_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_147884748.1\|4051_5266_+	cytochrome P450	NA	NA	NA	NA
WP_147884749.1\|5887_6604_+	response regulator	NA	NA	NA	NA
WP_147884750.1\|6816_7773_+	glyoxalase	NA	NA	NA	NA
WP_147884751.1\|8560_9538_+	alpha/beta fold hydrolase	A0A249XU20	Mycobacterium_phage	4.9e-10	25.4
WP_147884752.1\|9803_10370_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147884753.1\|10663_10993_-	hypothetical protein	NA	NA	NA	NA
WP_147884754.1\|11064_13002_-	hypothetical protein	A0A1V0SGX0	Hokovirus	1.3e-09	26.6

DBSCAN-SWA_2

18345 : 19386

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884760.1\|18345_19386_+	glutamine synthetase	A0A1V0SG77	Hokovirus	1.0e-69	42.4

DBSCAN-SWA_3

30018 : 34217

Pike_perch_iridovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884770.1\|30018_31614_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	1.6e-18	63.9
WP_147884771.1\|31613_32777_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_147884772.1\|32822_34217_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-40	27.4

DBSCAN-SWA_4

39049 : 47685

Diadromus_pulchellus_ascovirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884777.1\|39049_39817_+	SDR family NAD(P)-dependent oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	5.6e-09	28.5
WP_147884778.1\|39837_41025_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_147884779.1\|41039_42176_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_147884780.1\|42230_43118_+	3-hydroxyisobutyrate dehydrogenase	A0A077SLF7	Escherichia_phage	8.4e-17	28.4
WP_147884781.1\|43849_45505_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	8.1e-21	23.7
WP_147884782.1\|46323_47685_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-59	32.5

DBSCAN-SWA_5

50779 : 51703

Bordetella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884784.1\|50779_51703_+	helix-turn-helix domain-containing protein	A0A291LAM3	Bordetella_phage	7.4e-08	35.2

DBSCAN-SWA_6

64992 : 68513

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884793.1\|64992_65823_+	alpha/beta fold hydrolase	A0A2D1GKK1	Mycobacterium_phage	3.4e-12	29.5
WP_147884794.1\|65942_66707_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_147884795.1\|66777_67812_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_147884796.1\|67808_68513_+	glutamine amidotransferase	A0A2K9L2L9	Tupanvirus	1.4e-06	33.3

DBSCAN-SWA_7

72853 : 74356

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884802.1\|72853_74356_+	catalase	A0A2K9L0T1	Tupanvirus	7.9e-84	41.7

DBSCAN-SWA_8

83968 : 84955

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885323.1\|83968_84955_+	zinc-binding dehydrogenase	E3SJ82	Synechococcus_phage	5.0e-10	29.1

DBSCAN-SWA_9

105246 : 106290

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884829.1\|105246_106290_+	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	3.9e-21	30.0

DBSCAN-SWA_10

113083 : 124113

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884837.1\|113083_113998_-	NAD-binding protein	A0A077SLF7	Escherichia_phage	1.2e-71	50.0
WP_147884838.1\|114341_115343_+	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	5.0e-18	27.1
WP_147884839.1\|115370_116636_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.2e-79	43.7
WP_147884840.1\|116632_117274_+	aldolase	A0A077SK32	Escherichia_phage	2.4e-45	47.1
WP_147884841.1\|117366_118428_-	aldo/keto reductase	NA	NA	NA	NA
WP_147885325.1\|118453_119137_-	hypothetical protein	NA	NA	NA	NA
WP_147884842.1\|119136_120219_-	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	2.7e-17	27.7
WP_147884843.1\|120404_121427_+	ABC transporter permease	NA	NA	NA	NA
WP_147884844.1\|121457_122468_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147885326.1\|122568_124113_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	7.5e-13	28.4

DBSCAN-SWA_11

128757 : 137957

Bacillus_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884849.1\|128757_131418_-	EAL domain-containing protein	G3MA91	Bacillus_virus	1.1e-16	35.6
WP_147885327.1\|132293_132644_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_147884850.1\|133078_133378_+	hypothetical protein	NA	NA	NA	NA
WP_147884851.1\|133374_134967_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.9e-07	31.4
WP_147884852.1\|135716_137957_-	EAL domain-containing protein	G3MA91	Bacillus_virus	1.6e-16	29.6

DBSCAN-SWA_12

143524 : 147030

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884856.1\|143524_144598_+	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9L7I1	Tupanvirus	2.3e-08	26.0
WP_147884857.1\|144738_145023_+	YciI family protein	NA	NA	NA	NA
WP_147884858.1\|145019_146033_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_147884859.1\|146046_147030_+	zinc-binding dehydrogenase	K7Z7U2	Megavirus	1.9e-09	26.0

DBSCAN-SWA_13

154415 : 167663

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884867.1\|154415_156917_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-18	30.9
WP_147884868.1\|156983_157508_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_147884869.1\|158025_158304_-	HU family DNA-binding protein	A0A249Y2G7	Serratia_phage	1.4e-10	40.7
WP_147884870.1\|158796_159729_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147884871.1\|159740_160637_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147884872.1\|160688_162947_-	EAL domain-containing protein	G3MA91	Bacillus_virus	3.1e-15	33.5
WP_147884873.1\|163951_164263_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_136559098.1\|164448_164652_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	4.0e-07	50.0
WP_147884874.1\|164894_166796_+	EAL domain-containing protein	A0A2D0W9J3	Bordetella_phage	6.2e-09	40.8
WP_147884875.1\|167231_167663_+	helix-turn-helix domain-containing protein	Q8W6G2	Sinorhizobium_phage	2.4e-25	52.4

DBSCAN-SWA_14

174663 : 176347

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884881.1\|174663_175587_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	2.5e-72	49.3
WP_147884882.1\|175615_176347_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	5.5e-30	36.5

DBSCAN-SWA_15

184984 : 186502

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884892.1\|184984_186502_-	autoinducer 2 ABC transporter ATP-binding protein LsrA	G3M9Y6	Bacillus_virus	1.3e-09	24.8

DBSCAN-SWA_16

196607 : 200306

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884898.1\|196607_198065_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	9.6e-26	38.5
WP_147884899.1\|198203_198437_+	hypothetical protein	NA	NA	NA	NA
WP_147884900.1\|198932_200306_+\|transposase	ISNCY family transposase	A1YTJ2	Porcine_endogenous_retrovirus	1.8e-05	27.2

DBSCAN-SWA_17

211957 : 230766

Tupanvirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884913.1\|211957_212674_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.1e-10	25.5
WP_147884914.1\|212666_213383_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	9.2e-14	24.3
WP_147884915.1\|213422_214421_+	acetamidase	NA	NA	NA	NA
WP_147884916.1\|214484_216227_+	amidohydrolase	M1I9K9	Paramecium_bursaria_Chlorella_virus	1.2e-14	28.5
WP_147884917.1\|217575_217887_+	DUF736 family protein	NA	NA	NA	NA
WP_147884918.1\|218166_229323_+	type I secretion C-terminal target domain-containing protein	A0A2H4JEI4	uncultured_Caudovirales_phage	2.5e-09	33.3
WP_147884919.1\|229449_230766_-	AarF/ABC1/UbiB kinase family protein	M4QMK7	Micromonas_pusilla_virus	1.2e-22	29.7

DBSCAN-SWA_18

234481 : 237850

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884925.1\|234481_237850_+	Ti-type conjugative transfer relaxase TraA	A0A2R8FE73	Brazilian_cedratvirus	1.1e-16	28.2

DBSCAN-SWA_19

242020 : 243448

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884931.1\|242020_243448_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.9e-55	31.7

DBSCAN-SWA_20

251314 : 258841

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884940.1\|251314_252304_-	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	4.2e-41	32.5
WP_147884941.1\|252628_253516_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.2e-63	47.0
WP_147884942.1\|253629_255036_+	phosphomannomutase	NA	NA	NA	NA
WP_147884943.1\|255552_256035_-	hypothetical protein	NA	NA	NA	NA
WP_147884944.1\|256505_257522_-	NAD-dependent epimerase/dehydratase family protein	A0A2K9L4U8	Tupanvirus	6.0e-27	28.0
WP_147884945.1\|257524_258841_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	2.7e-80	38.8

DBSCAN-SWA_21

265053 : 265845

Caulobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884949.1\|265053_265845_+	serine/threonine protein phosphatase	A0A1V0EC57	Caulobacter_phage	3.8e-21	32.7

DBSCAN-SWA_22

271502 : 273580

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885330.1\|271502_272633_+	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	3.2e-130	65.1
WP_147884952.1\|272635_273580_+	NAD-dependent epimerase/dehydratase family protein	R9S8B8	Prochlorococcus_phage	8.8e-97	54.5

DBSCAN-SWA_23

286524 : 287445

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884965.1\|286524_287445_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	7.7e-05	31.1

DBSCAN-SWA_24

290823 : 291909

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884970.1\|290823_291909_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	1.3e-27	33.8

DBSCAN-SWA_25

297078 : 303385

Gordonia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884979.1\|297078_298122_-	acyltransferase family protein	A0A166XZF2	Gordonia_phage	1.2e-06	27.8
WP_147884980.1\|298187_299346_+\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	2.1e-20	31.9
WP_147884981.1\|301867_303385_-	AMP-binding protein	Q75ZG1	Hepacivirus	1.9e-40	28.5

DBSCAN-SWA_26

308709 : 309759

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884985.1\|308709_309759_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	3.1e-26	35.6

DBSCAN-SWA_27

320569 : 323263

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147884996.1\|320569_321352_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-14	31.4
WP_147884997.1\|321351_322293_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_147884998.1\|322285_323263_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.4e-51	37.9

DBSCAN-SWA_28

331836 : 332883

Mycoplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885005.1\|331836_332883_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	1.1e-18	39.6

DBSCAN-SWA_29

342715 : 343804

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885014.1\|342715_343804_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.9e-27	32.4

DBSCAN-SWA_30

352089 : 354342

Oenococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885023.1\|352089_353274_-	muconate cycloisomerase	Q6A202	Oenococcus_phage	8.9e-06	22.3
WP_147885024.1\|353427_354342_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.1e-11	26.2

DBSCAN-SWA_31

361569 : 363375

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885032.1\|361569_362364_-	response regulator	W8CYM9	Bacillus_phage	4.0e-10	26.6
WP_147885033.1\|362571_363375_+	response regulator	W8CYM9	Bacillus_phage	4.6e-06	25.4

DBSCAN-SWA_32

375031 : 378651

Ochrobactrum_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885042.1\|375031_376219_+	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	2.7e-135	59.5
WP_147885043.1\|376293_377271_+	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	5.5e-62	43.1
WP_147885044.1\|377436_378651_+	replication initiation protein RepC	L7TKN6	Rhizobium_phage	5.3e-22	28.7

DBSCAN-SWA_33

389218 : 391131

Brochothrix_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885054.1\|389218_390325_+	DUF4172 domain-containing protein	D7RWK9	Brochothrix_phage	5.4e-05	23.0
WP_147885055.1\|390408_391131_+\|transposase	IS6 family transposase	A0A1X9I6E7	Streptococcus_phage	6.8e-25	36.7

DBSCAN-SWA_34

394776 : 404396

Acanthamoeba_polyphaga_mimivirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885058.1\|394776_396090_-	alpha/beta hydrolase fold domain-containing protein	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	5.8e-22	26.3
WP_147885059.1\|396109_396517_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_147885060.1\|396698_397613_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147885061.1\|397642_398521_-	helix-turn-helix domain-containing protein	A0A291LAM3	Bordetella_phage	1.2e-07	32.7
WP_147885062.1\|399217_399547_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147885063.1\|399671_400562_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	3.0e-06	25.4
WP_147885064.1\|400846_400963_-	hypothetical protein	NA	NA	NA	NA
WP_112241122.1\|401357_401981_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_112241120.1\|402318_402627_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_147885065.1\|402626_403169_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_147885066.1\|403322_404396_-	Fic family protein	D7RWK9	Brochothrix_phage	1.1e-10	24.2

DBSCAN-SWA_35

414212 : 416179

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885073.1\|414212_415199_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	4.5e-11	28.7
WP_147885074.1\|415195_416179_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.7e-16	31.5

DBSCAN-SWA_36

426454 : 427126

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885082.1\|426454_427126_-	response regulator	A0A1V0SGX0	Hokovirus	5.6e-05	26.4

DBSCAN-SWA_37

437283 : 439149

Micromonas_sp._RCC1109_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885092.1\|437283_439149_-	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	E5EQ70	Micromonas_sp._RCC1109_virus	1.2e-20	22.7

DBSCAN-SWA_38

442542 : 452127

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885096.1\|442542_443541_-	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	9.4e-25	28.7
WP_147885097.1\|443713_444664_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147885098.1\|444763_445876_+	ABC transporter permease	NA	NA	NA	NA
WP_147885099.1\|445877_446678_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.1e-11	28.6
WP_147885100.1\|446917_447079_+	hypothetical protein	NA	NA	NA	NA
WP_147885101.1\|447063_447237_+	hypothetical protein	NA	NA	NA	NA
WP_147885102.1\|447994_448654_-	hypothetical protein	NA	NA	NA	NA
WP_147885103.1\|449022_450075_+	zinc-binding dehydrogenase	M1PHA2	Moumouvirus	5.1e-05	24.8
WP_147885104.1\|450187_450757_-	hypothetical protein	NA	NA	NA	NA
WP_147885105.1\|451146_452127_+	3'-5' exonuclease	A0A223W0B0	Agrobacterium_phage	5.1e-31	36.0

DBSCAN-SWA_39

460341 : 462855

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885112.1\|460341_461124_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-14	29.9
WP_147885113.1\|461154_462855_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	5.5e-57	29.9

DBSCAN-SWA_40

469909 : 470668

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885118.1\|469909_470668_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.4e-14	32.7

DBSCAN-SWA_41

479674 : 486548

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885127.1\|479674_480748_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	7.3e-23	33.0
WP_147885128.1\|480808_481714_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_147885129.1\|481717_482563_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_147885130.1\|482562_483297_+	glucose 1-dehydrogenase	F2NZ40	Diadromus_pulchellus_ascovirus	2.0e-16	34.0
WP_147885131.1\|483311_484079_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.9e-13	29.6
WP_147885132.1\|484153_485386_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_147885133.1\|485450_486548_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.2e-30	38.6

DBSCAN-SWA_42

491694 : 493503

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885139.1\|491694_493503_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	6.3e-19	35.6

DBSCAN-SWA_43

496705 : 499869

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885142.1\|496705_497800_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.9e-27	34.6
WP_147885340.1\|498049_498988_+	hypothetical protein	NA	NA	NA	NA
WP_147885143.1\|498984_499869_+	ThiF family adenylyltransferase	A0A1V0SIK8	Klosneuvirus	5.1e-06	35.4

DBSCAN-SWA_44

506379 : 506784

Ralstonia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885148.1\|506379_506784_+	recombinase family protein	A0A1W5LU24	Ralstonia_phage	1.6e-07	42.5

DBSCAN-SWA_45

511626 : 513597

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885155.1\|511626_513597_-	glycosyltransferase	M1I277	Paramecium_bursaria_Chlorella_virus	4.2e-24	28.3

DBSCAN-SWA_46

517536 : 518769

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885160.1\|517536_518769_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	1.1e-30	37.6

DBSCAN-SWA_47

523507 : 526859

Burkholderia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885165.1\|523507_524416_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.5e-32	31.6
WP_147885166.1\|524536_525790_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_147885167.1\|525779_526859_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0E3I315	Synechococcus_phage	6.7e-08	39.0

DBSCAN-SWA_48

533134 : 533887

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885173.1\|533134_533887_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	6.4e-34	40.3

DBSCAN-SWA_49

547863 : 551127

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885344.1\|547863_551127_+	DNA polymerase III subunit alpha	A0A0K1Y8T6	Streptomyces_phage	1.7e-91	26.9

DBSCAN-SWA_50

561457 : 562456

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885345.1\|561457_562456_+	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	2.8e-16	28.3

DBSCAN-SWA_51

565608 : 566778

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885200.1\|565608_566778_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	5.9e-26	31.7

DBSCAN-SWA_52

570710 : 571481

Chrysochromulina_ericina_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885205.1\|570710_571481_+	exodeoxyribonuclease III	A0A0N9QXX6	Chrysochromulina_ericina_virus	2.6e-14	25.2

DBSCAN-SWA_53

575353 : 582187

Bacillus_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885211.1\|575353_577483_+	EAL domain-containing protein	G3MA91	Bacillus_virus	1.9e-14	33.5
WP_147885212.1\|577990_578452_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147885213.1\|578848_579067_-	hypothetical protein	NA	NA	NA	NA
WP_147885214.1\|579331_579802_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	4.0e-10	34.5
WP_147885215.1\|580249_582187_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-14	33.8

DBSCAN-SWA_54

585382 : 586468

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885218.1\|585382_586468_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.7e-25	36.2

DBSCAN-SWA_55

589660 : 608270

Pandoravirus(10.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885222.1\|589660_590833_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	2.1e-15	29.9
WP_147885223.1\|590829_591564_-	FCD domain-containing protein	NA	NA	NA	NA
WP_147885224.1\|592025_592295_+	hypothetical protein	NA	NA	NA	NA
WP_147885225.1\|592507_592711_-	cold shock domain-containing protein	A0A2H4N7Y6	Lake_Baikal_phage	1.8e-07	51.7
WP_147885226.1\|593140_593506_+	hypothetical protein	NA	NA	NA	NA
WP_147885227.1\|593505_593874_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_147885228.1\|594167_596228_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	6.8e-70	29.8
WP_147885229.1\|596632_596890_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147885346.1\|597283_597547_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147885230.1\|597641_598532_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	3.3e-05	31.1
WP_147885231.1\|599596_600535_-	acyltransferase family protein	A0A0M4REL5	Salmonella_phage	7.0e-22	29.0
WP_147885232.1\|601442_602450_+	NAD-dependent epimerase/dehydratase family protein	A0A2K9L0I7	Tupanvirus	7.8e-35	31.0
WP_147885233.1\|602452_603748_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA
WP_147885234.1\|603852_604848_+	SDR family NAD(P)-dependent oxidoreductase	A0A1D7XFE8	Escherichia_phage	3.5e-27	31.2
WP_147885235.1\|604840_606028_+	LegC family aminotransferase	A0A0F7LAY0	uncultured_marine_virus	2.4e-19	28.8
WP_147885236.1\|606024_607188_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	A0A2K9V8D8	Bandra_megavirus	3.9e-06	20.6
WP_147885237.1\|607184_608270_+	N-acetylneuraminate synthase	A0A1B1IVE2	uncultured_Mediterranean_phage	2.0e-28	32.1

DBSCAN-SWA_56

611570 : 612395

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885242.1\|611570_612395_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	7.8e-09	28.6

DBSCAN-SWA_57

615996 : 617223

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885247.1\|615996_617223_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-12	26.0

DBSCAN-SWA_58

628833 : 632410

Tetraselmis_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885347.1\|628833_629664_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.1e-34	36.5
WP_147885257.1\|629820_630501_+	glycosyltransferase	A0A2P0VNH9	Tetraselmis_virus	3.3e-45	41.2
WP_147885258.1\|630446_631673_+	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA
WP_147885259.1\|631690_632410_+	NTP transferase domain-containing protein	A0A1B1IVD3	uncultured_Mediterranean_phage	8.1e-10	38.3

DBSCAN-SWA_59

637330 : 641286

Moumouvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885264.1\|637330_638185_+	sugar nucleotide-binding protein	A0A2P1ELT6	Moumouvirus	2.8e-33	32.8
WP_147885348.1\|638196_639210_+	polysaccharide biosynthesis protein	K7Y9E1	Megavirus	2.1e-40	35.6
WP_147885265.1\|639202_640330_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	2.7e-108	48.9
WP_147885266.1\|640365_641286_-	NAD-dependent epimerase/dehydratase family protein	M1H4P8	Acanthocystis_turfacea_Chlorella_virus	7.7e-05	25.9

DBSCAN-SWA_60

650456 : 652566

Oenococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885273.1\|650456_651665_+	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.4e-35	30.1
WP_147885274.1\|651807_652566_-	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.8e-07	24.7

DBSCAN-SWA_61

656744 : 657191

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885279.1\|656744_657191_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	2.6e-06	29.6

DBSCAN-SWA_62

662446 : 663193

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885284.1\|662446_663193_+	SDR family NAD(P)-dependent oxidoreductase	W8CYX9	Bacillus_phage	6.4e-10	41.6

DBSCAN-SWA_63

666627 : 673938

Oenococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147885287.1\|666627_667776_-	galactonate dehydratase	Q6A202	Oenococcus_phage	3.7e-57	35.4
WP_147885288.1\|667814_668576_-	FCD domain-containing protein	NA	NA	NA	NA
WP_147885289.1\|668780_669764_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147885290.1\|669830_671333_+	L-arabinose ABC transporter ATP-binding protein AraG	A0A1J0FA64	Only_Syngen_Nebraska_virus	1.8e-11	25.1
WP_147885291.1\|671345_672296_+	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_147885292.1\|672292_673156_+	aldose 1-epimerase	NA	NA	NA	NA
WP_147885293.1\|673158_673938_+	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	3.0e-10	24.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042826

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP042825

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection