CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041361	Bacillus velezensis strain WRN014 chromosome, complete genome	0 crisprs	csa3,DinG,cas3,DEDDh	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

608374 : 655940

uncultured_Caudovirales_phage(33.33%)

head,capsid,portal,integrase,tail,protease,tRNA,terminase

attL 618565:618585|attR 660186:660206

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003155999.1\|608374_608851_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_024084958.1\|608831_609521_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_003155993.1\|609531_609987_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_069013100.1\|609979_611020_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	7.7e-62	41.7
WP_079005209.1\|611243_613172_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	7.9e-60	32.6
WP_003155986.1\|613311_613824_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_003155984.1\|613820_614468_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_003155981.1\|614486_614657_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_007609791.1\|614663_615422_+	twin-arginine translocase subunit TatC	NA	NA	NA	NA
WP_003155975.1\|615463_615655_-	YdiK family protein	NA	NA	NA	NA
WP_003155972.1\|615651_616386_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003155970.1\|616622_616907_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	2.2e-19	51.6
WP_003155941.1\|616948_618583_+	chaperonin GroEL	A0A219YK78	uncultured_virus	3.7e-159	57.5
618565:618585	attL	NA	NA	NA	NA
WP_003155938.1\|618673_619870_-\|integrase	site-specific integrase	S6C485	Thermus_phage	3.5e-82	44.6
WP_003155936.1\|619887_620394_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	1.4e-56	62.8
WP_071348587.1\|620466_621366_-	hypothetical protein	NA	NA	NA	NA
WP_003155933.1\|621620_621983_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	4.9e-16	44.8
WP_079005208.1\|622143_622374_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003155930.1\|622414_622594_+	hypothetical protein	NA	NA	NA	NA
WP_003155923.1\|622577_622823_-	hypothetical protein	X2KU02	Streptococcus_phage	1.1e-22	61.3
WP_003155921.1\|622903_623218_+	hypothetical protein	A0A2H4JDL0	uncultured_Caudovirales_phage	2.8e-15	50.0
WP_003155918.1\|623214_623985_+	phage antirepressor Ant	A0A290FZK7	Caldibacillus_phage	8.5e-74	68.5
WP_003155916.1\|624094_624667_+	helix-turn-helix transcriptional regulator	A0A2H4J884	uncultured_Caudovirales_phage	1.3e-58	55.0
WP_003155914.1\|624663_624921_+	hypothetical protein	A0A2H4J4M9	uncultured_Caudovirales_phage	1.0e-07	39.2
WP_003155912.1\|624917_625121_+	hypothetical protein	NA	NA	NA	NA
WP_003155909.1\|625222_625414_+	hypothetical protein	NA	NA	NA	NA
WP_003155908.1\|625410_626328_+	hypothetical protein	A0A0A7S0A9	Clostridium_phage	9.4e-88	61.7
WP_076983163.1\|626347_627085_+	hypothetical protein	A0A0A7RUC1	Clostridium_phage	3.9e-52	44.9
WP_003155906.1\|627084_627273_+	hypothetical protein	NA	NA	NA	NA
WP_079005213.1\|627282_627984_+	DnaD domain protein	A0A2H4J6G9	uncultured_Caudovirales_phage	5.3e-06	33.3
WP_131259882.1\|627868_628816_+	ATP-binding protein	A0A0K2CPA5	Brevibacillus_phage	1.0e-57	51.6
WP_079005207.1\|629050_629479_+	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	2.8e-42	62.0
WP_079005206.1\|629770_629974_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	1.3e-21	76.2
WP_003155893.1\|630114_630495_+	hypothetical protein	NA	NA	NA	NA
WP_079005205.1\|630491_630866_+	hypothetical protein	K4I239	Lactobacillus_phage	4.1e-05	43.1
WP_071348438.1\|630862_631123_+	hypothetical protein	F8WQ54	Bacillus_phage	5.7e-06	43.2
WP_079005204.1\|631126_631969_+	DNA adenine methylase	U5P0W8	Brevibacillus_phage	1.0e-88	57.9
WP_079005203.1\|631947_632361_+	hypothetical protein	A0A1P8CWZ8	Bacillus_phage	9.5e-72	94.7
WP_079005202.1\|632503_632854_-	hypothetical protein	NA	NA	NA	NA
WP_079005201.1\|632962_633397_+	hypothetical protein	A0A2H4J8A0	uncultured_Caudovirales_phage	1.2e-48	70.0
WP_072565159.1\|633580_633784_+	hypothetical protein	NA	NA	NA	NA
WP_095836083.1\|634049_634178_+	hypothetical protein	NA	NA	NA	NA
WP_079005200.1\|634192_634708_+	sigma-70 family RNA polymerase sigma factor	A0A1L2JY33	Aeribacillus_phage	1.5e-26	42.6
WP_013351218.1\|635049_635241_+	hypothetical protein	NA	NA	NA	NA
WP_003155868.1\|635248_635461_+	helix-turn-helix domain-containing protein	A0A1Z1LZP5	Bacillus_phage	9.6e-12	52.9
WP_079005199.1\|635593_635779_+	hypothetical protein	NA	NA	NA	NA
WP_079005198.1\|635845_636607_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_079005197.1\|636752_637514_+	hypothetical protein	A0A2H4J4R0	uncultured_Caudovirales_phage	4.0e-68	57.3
WP_079005196.1\|637500_638709_+\|terminase	PBSX family phage terminase large subunit	A0A2H4J8B0	uncultured_Caudovirales_phage	6.4e-209	87.0
WP_079005195.1\|638708_640112_+\|portal	phage portal protein	A0A2H4J4Q7	uncultured_Caudovirales_phage	1.4e-151	59.8
WP_079005194.1\|640098_641025_+\|head	phage head morphogenesis protein	A0A1Q1PVS0	Bacillus_phage	3.0e-81	51.5
WP_079005193.1\|641127_641709_+	DUF4355 domain-containing protein	A0A2H4J4P4	uncultured_Caudovirales_phage	2.1e-53	54.2
WP_015388406.1\|641724_642642_+\|capsid	phage major capsid protein	A0A2H4JCG0	uncultured_Caudovirales_phage	2.9e-113	67.9
WP_079005192.1\|642646_642982_+	hypothetical protein	NA	NA	NA	NA
WP_014304502.1\|642983_643256_+	hypothetical protein	NA	NA	NA	NA
WP_014304503.1\|643264_643573_+	hypothetical protein	R4IFL8	Staphylococcus_phage	4.8e-12	39.6
WP_079005191.1\|643569_643908_+\|head	phage head closure protein	NA	NA	NA	NA
WP_014471518.1\|643900_644317_+	HK97 gp10 family phage protein	O48447	Bacillus_phage	7.4e-32	54.2
WP_003155849.1\|644335_644734_+	DUF3168 domain-containing protein	W8EK61	Geobacillus_phage	6.4e-25	44.6
WP_017417511.1\|644747_645272_+\|tail	phage major tail protein, TP901-1 family	Q0PDK9	Bacillus_phage	3.7e-28	42.9
WP_069013025.1\|645312_645528_+	fibronectin type III domain-containing protein	Q0PDK9	Bacillus_phage	1.2e-17	72.7
WP_076983593.1\|645541_645784_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_079005190.1\|645840_646347_+	hypothetical protein	I6T7F0	Staphylococcus_virus	5.1e-11	33.3
WP_071348589.1\|646394_646703_+	hypothetical protein	NA	NA	NA	NA
WP_079005189.1\|646707_651783_+	hypothetical protein	M9NRJ5	Staphylococcus_phage	5.1e-34	26.1
WP_031378548.1\|651779_652544_+\|tail	phage tail family protein	NA	NA	NA	NA
WP_079005188.1\|652556_655940_+	hypothetical protein	Q5YA57	Bacillus_phage	3.9e-131	45.9
660186:660206	attR	NA	NA	NA	NA

DBSCAN-SWA_2

695505 : 705396

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408896.1\|695505_696798_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.3
WP_003155762.1\|696873_697593_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	5.2e-49	45.2
WP_003155758.1\|697592_697847_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	4.7e-05	33.3
WP_043866890.1\|697843_698527_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003155755.1\|698510_700739_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.2e-158	40.4
WP_003155754.1\|700714_702145_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.6e-54	32.9
WP_003155753.1\|702236_703277_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.4e-63	41.1
WP_003155752.1\|703273_703861_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.0e-26	39.3
WP_057080046.1\|703857_705396_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.1e-77	50.8

DBSCAN-SWA_3

1260752 : 1292651

Bacillus_phage(32.26%)

portal,plate,holin,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087920760.1\|1260752_1261889_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	1.3e-94	47.9
WP_003154881.1\|1261878_1262013_+	PhrA family phosphatase inhibitor	NA	NA	NA	NA
WP_003154880.1\|1262155_1263109_+	LysM peptidoglycan-binding domain-containing protein	A0A218KC88	Bacillus_phage	1.1e-62	69.3
WP_003154878.1\|1263146_1263524_-	PH domain-containing protein	A5GYQ0	Lactococcus_phage	1.1e-15	40.6
WP_063174231.1\|1263633_1264239_+	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	3.3e-41	47.3
WP_003154873.1\|1264393_1264984_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.0e-39	51.7
WP_003154871.1\|1265132_1265471_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	8.4e-18	45.8
WP_063174230.1\|1265662_1265842_+	hypothetical protein	NA	NA	NA	NA
WP_063174229.1\|1265831_1266659_+	hypothetical protein	S6BFM4	Thermus_phage	1.3e-19	49.0
WP_063174228.1\|1266558_1267359_+	ATP-binding protein	A6XMI1	Bacillus_virus	6.1e-59	45.1
WP_063174227.1\|1267623_1267965_+	hypothetical protein	NA	NA	NA	NA
WP_003154859.1\|1267954_1268158_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	5.4e-12	48.5
WP_063174226.1\|1268270_1268783_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	5.0e-22	42.7
WP_057080061.1\|1268895_1269693_+\|terminase	terminase	A0A0S2MVB6	Bacillus_phage	2.7e-59	50.2
WP_063174225.1\|1269689_1270988_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	9.4e-150	59.2
WP_099762611.1\|1271036_1272416_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	5.1e-138	55.4
WP_015417286.1\|1272447_1273293_+	hypothetical protein	A0A1B1P7E4	Bacillus_phage	4.3e-55	57.6
WP_003154848.1\|1273319_1274255_+\|portal	phage portal protein	A0A1B1P7E3	Bacillus_phage	2.5e-104	62.8
WP_003154846.1\|1274271_1274655_+	DUF3199 family protein	NA	NA	NA	NA
WP_063174224.1\|1274651_1275008_+	DUF3599 family protein	NA	NA	NA	NA
WP_052585748.1\|1275004_1275508_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	1.6e-36	41.1
WP_014304848.1\|1275504_1275951_+	hypothetical protein	NA	NA	NA	NA
WP_003154839.1\|1275947_1276157_+	hypothetical protein	NA	NA	NA	NA
WP_044053125.1\|1276156_1277554_+\|portal	phage portal protein	A0A0A7RTT5	Clostridium_phage	9.0e-82	40.4
WP_003154837.1\|1277555_1277999_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	8.4e-26	45.2
WP_003154836.1\|1278074_1278521_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.0e-10	35.8
WP_015239684.1\|1278562_1278715_+	hypothetical protein	NA	NA	NA	NA
WP_099762609.1\|1278702_1283829_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	2.0e-41	46.6
WP_007610816.1\|1283821_1284481_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.8e-08	45.3
WP_003154829.1\|1284494_1285472_+	hypothetical protein	A0A1L6BY20	Clostridium_phage	2.9e-34	30.9
WP_007610818.1\|1285471_1285738_+	DUF2577 family protein	S6C459	Thermus_phage	1.2e-06	38.6
WP_003154825.1\|1285841_1286267_+	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	1.5e-11	35.9
WP_079004808.1\|1286259_1287306_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.0e-69	43.8
WP_003154823.1\|1287289_1287868_+	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	2.4e-12	31.0
WP_003154822.1\|1287864_1288137_+	hypothetical protein	NA	NA	NA	NA
WP_063174222.1\|1288139_1289762_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	5.3e-41	39.3
WP_014304856.1\|1289774_1290146_+	hypothetical protein	NA	NA	NA	NA
WP_003154819.1\|1290151_1290349_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	4.3e-14	61.8
WP_063174221.1\|1290405_1291167_+	hypothetical protein	NA	NA	NA	NA
WP_032866112.1\|1291218_1291482_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	5.2e-23	63.1
WP_003154813.1\|1291495_1291759_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	2.3e-23	65.5
WP_024085195.1\|1291772_1292651_+	LysM peptidoglycan-binding domain-containing protein	Q9ZXD7	Bacillus_phage	4.8e-81	60.5

DBSCAN-SWA_4

1840656 : 1846869

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014305044.1\|1840656_1841049_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	6.5e-30	59.1
WP_003154060.1\|1841008_1843111_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	86.0
WP_003154059.1\|1843128_1844118_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	8.7e-156	83.6
WP_003154057.1\|1844166_1844787_+	hypothetical protein	A0A127AYS1	Bacillus_phage	2.7e-46	47.4
WP_069013563.1\|1844835_1845594_-	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	6.2e-53	50.4
WP_015388200.1\|1845627_1845852_-	hypothetical protein	NA	NA	NA	NA
WP_015417523.1\|1845900_1846869_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	8.0e-53	40.9

DBSCAN-SWA_5

2135865 : 2149009

Bacillus_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063174275.1\|2135865_2136240_+	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	3.6e-30	52.8
WP_057080783.1\|2136474_2136927_-	hypothetical protein	O64117	Bacillus_phage	4.1e-60	76.0
WP_057080784.1\|2137288_2138425_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	2.4e-165	76.4
WP_063174276.1\|2138414_2138597_+	hypothetical protein	NA	NA	NA	NA
WP_044053348.1\|2138921_2139941_+	hypothetical protein	NA	NA	NA	NA
WP_014305240.1\|2140001_2140361_-	hypothetical protein	O64028	Bacillus_phage	3.7e-32	60.5
WP_024085506.1\|2140366_2140834_-	DUF4879 domain-containing protein	O64027	Bacillus_phage	1.0e-42	57.1
WP_014305242.1\|2141408_2141747_-	hypothetical protein	A0A1P8CWM9	Bacillus_phage	1.1e-25	56.2
WP_063174277.1\|2142504_2143101_-	SMI1/KNR4 family protein	O64025	Bacillus_phage	8.5e-90	84.6
WP_024085508.1\|2143155_2143614_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_063174278.1\|2143628_2145428_-	ribonuclease YeeF family protein	A0A1P8CWI7	Bacillus_phage	4.2e-172	65.0
WP_041482372.1\|2146362_2146671_-	hypothetical protein	NA	NA	NA	NA
WP_043867223.1\|2146728_2148396_+	recombinase family protein	O64015	Bacillus_phage	1.1e-272	89.1
WP_025852502.1\|2148418_2149009_+	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	1.1e-12	30.5

DBSCAN-SWA_6

2183033 : 2214445

Bacillus_phage(90.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079005139.1\|2183033_2183588_-	hypothetical protein	O64195	Bacillus_phage	7.2e-91	92.1
WP_014470254.1\|2183685_2183925_+	helix-turn-helix transcriptional regulator	A0A1P8CX60	Bacillus_phage	6.5e-25	65.8
WP_079005138.1\|2184498_2185047_-	hypothetical protein	NA	NA	NA	NA
WP_079005137.1\|2185027_2185573_-	hypothetical protein	NA	NA	NA	NA
WP_095836066.1\|2185562_2185718_-	hypothetical protein	A0A1P8CX49	Bacillus_phage	1.3e-13	85.4
WP_079005136.1\|2185750_2185963_-	hypothetical protein	NA	NA	NA	NA
WP_079005135.1\|2185996_2186827_-	metallophosphoesterase	O64184	Bacillus_phage	1.9e-151	88.0
WP_042976081.1\|2186985_2187198_+	alpha/beta-type small acid-soluble spore protein	A0A1P8CX76	Bacillus_phage	4.1e-31	100.0
WP_079005134.1\|2187279_2187468_-	hypothetical protein	A0A1P8CX75	Bacillus_phage	1.4e-25	96.8
WP_079005133.1\|2187977_2188298_-	hypothetical protein	NA	NA	NA	NA
WP_072589202.1\|2188444_2188975_+	hypothetical protein	NA	NA	NA	NA
WP_079005132.1\|2189026_2189392_-	hypothetical protein	NA	NA	NA	NA
WP_079005131.1\|2189521_2190028_-	dihydrofolate reductase	A0A0H3UYW4	Geobacillus_virus	2.4e-32	39.8
WP_079005130.1\|2190027_2190867_-	thymidylate synthase	A0A1P8CX42	Bacillus_phage	1.9e-151	90.3
WP_045207798.1\|2191642_2191942_-	hypothetical protein	O64180	Bacillus_phage	1.3e-17	51.1
WP_045207799.1\|2191934_2192243_-	hypothetical protein	NA	NA	NA	NA
WP_079005129.1\|2192263_2192569_-	hypothetical protein	A0A1P8CX64	Bacillus_phage	3.1e-11	58.8
WP_077722340.1\|2192860_2193475_-	hypothetical protein	A0A127AYS1	Bacillus_phage	2.1e-43	42.2
WP_079005128.1\|2193716_2193956_-	thiol reductase thioredoxin	A0A1P8CX24	Bacillus_phage	1.2e-26	76.2
WP_079005127.1\|2193952_2194939_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4JMU8	Bacillus_phage	6.4e-151	83.6
WP_079005126.1\|2194939_2195260_-	hypothetical protein	NA	NA	NA	NA
WP_079005125.1\|2195279_2198534_-	hypothetical protein	A0A1P8CX40	Bacillus_phage	0.0e+00	95.6
WP_079005124.1\|2198505_2198892_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A1P8CX56	Bacillus_phage	8.9e-56	84.4
WP_038458556.1\|2198888_2199239_-	hypothetical protein	O64171	Bacillus_phage	4.5e-22	47.5
WP_079005123.1\|2199531_2199798_-	hypothetical protein	NA	NA	NA	NA
WP_079005122.1\|2199821_2200184_-	hypothetical protein	NA	NA	NA	NA
WP_095836067.1\|2200189_2200333_-	hypothetical protein	O64168	Bacillus_phage	1.9e-16	90.9
WP_079005121.1\|2200325_2200538_-	hypothetical protein	NA	NA	NA	NA
WP_079005120.1\|2200600_2201068_-	hypothetical protein	O64167	Bacillus_phage	3.8e-69	87.8
WP_131259890.1\|2201119_2201293_-	DUF1653 domain-containing protein	A0A1P8CX21	Bacillus_phage	4.3e-10	69.2
WP_079005119.1\|2201282_2201474_-	hypothetical protein	S6BUY9	Bacillus_phage	6.8e-09	46.8
WP_079005118.1\|2201518_2201812_-	hypothetical protein	NA	NA	NA	NA
WP_079005117.1\|2201854_2202052_-	hypothetical protein	NA	NA	NA	NA
WP_079005116.1\|2202070_2202418_-	hypothetical protein	O64164	Bacillus_phage	9.8e-54	93.0
WP_079005115.1\|2202432_2202843_-	hypothetical protein	A0A1P8CX27	Bacillus_phage	6.8e-38	64.9
WP_079005114.1\|2202854_2203304_-	hypothetical protein	NA	NA	NA	NA
WP_038458576.1\|2203320_2203500_-	hypothetical protein	NA	NA	NA	NA
WP_079005113.1\|2203531_2204005_-	hypothetical protein	O64162	Bacillus_phage	6.2e-59	66.7
WP_014470217.1\|2204325_2204550_-	hypothetical protein	NA	NA	NA	NA
WP_079005111.1\|2205055_2205283_-	hypothetical protein	O64157	Bacillus_phage	8.1e-25	70.7
WP_079005110.1\|2205320_2205548_-	hypothetical protein	O64155	Bacillus_phage	4.5e-15	61.8
WP_079005109.1\|2205585_2205864_-	hypothetical protein	NA	NA	NA	NA
WP_079005108.1\|2205904_2206456_-	hypothetical protein	NA	NA	NA	NA
WP_079005107.1\|2206581_2206929_+	hypothetical protein	NA	NA	NA	NA
WP_038458597.1\|2206991_2207510_-	5'-3'-deoxyribonucleotidase	A0A1P8CX15	Bacillus_phage	5.7e-90	90.7
WP_038458598.1\|2207487_2208015_-	AAA family ATPase	A0A1P8CX28	Bacillus_phage	1.7e-70	79.4
WP_014417936.1\|2208174_2208378_-	YorP family protein	O64150	Bacillus_phage	1.0e-26	80.6
WP_079005165.1\|2208389_2209049_-	hypothetical protein	A0A1P8CX16	Bacillus_phage	3.1e-24	35.8
WP_079005106.1\|2209111_2210833_-	hypothetical protein	A0A1B1P7M5	Bacillus_phage	8.6e-175	56.0
WP_079005105.1\|2210842_2211910_-	hypothetical protein	NA	NA	NA	NA
WP_079005104.1\|2211925_2212942_-	hypothetical protein	A0A1W6JK26	Lactococcus_phage	2.1e-16	29.6
WP_029974388.1\|2212963_2214445_-	DNA helicase	V9VET6	Lactococcus_phage	1.5e-42	26.9

DBSCAN-SWA_7

2217472 : 2248314

Bacillus_phage(86.84%)

integrase

attL 2235917:2235939|attR 2253472:2253494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079005100.1\|2217472_2217847_-	hypothetical protein	A0A1P8CX10	Bacillus_phage	2.3e-53	79.0
WP_038458623.1\|2217985_2218369_-	hypothetical protein	NA	NA	NA	NA
WP_014471971.1\|2218560_2218938_-	hypothetical protein	A0A1P8CX06	Bacillus_phage	3.4e-52	76.2
WP_046559760.1\|2218976_2220719_-	right-handed parallel beta-helix repeat-containing protein	O64135	Bacillus_phage	6.8e-220	64.0
WP_079005164.1\|2220715_2221537_-	poly-gamma-glutamate hydrolase family protein	O64134	Bacillus_phage	6.9e-90	62.9
WP_077722306.1\|2221636_2222014_-	hypothetical protein	A8ASN9	Listeria_phage	1.2e-17	41.2
WP_079005099.1\|2222047_2222500_-	hypothetical protein	K4I239	Lactobacillus_phage	4.0e-15	47.3
WP_079005098.1\|2222517_2222790_-	hypothetical protein	A0A1P8CWZ5	Bacillus_phage	4.7e-35	81.1
WP_079005097.1\|2222779_2223667_-	hypothetical protein	A0A1P8CWZ3	Bacillus_phage	2.0e-159	93.2
WP_079005096.1\|2223715_2224195_-	hypothetical protein	A0A191ZDH8	Pseudoalteromonas_virus	6.8e-13	46.1
WP_061573857.1\|2224210_2224462_-	hypothetical protein	NA	NA	NA	NA
WP_061573814.1\|2224487_2224733_-	hypothetical protein	A0A1P8CWZ6	Bacillus_phage	7.2e-27	85.5
WP_079005095.1\|2224804_2225479_+	SOS response-associated peptidase	A0A1P8CX02	Bacillus_phage	2.1e-76	95.8
WP_079005094.1\|2225548_2226361_+	ATP-dependent DNA ligase	O64130	Bacillus_phage	3.9e-138	86.3
WP_079005093.1\|2226434_2226842_-	hypothetical protein	A0A1P8CWZ8	Bacillus_phage	8.5e-65	88.7
WP_079005092.1\|2227297_2227801_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	D2XR49	Bacillus_phage	7.8e-36	52.1
WP_062623441.1\|2227841_2228150_-	hypothetical protein	NA	NA	NA	NA
WP_062623442.1\|2228161_2228686_-	hypothetical protein	A0A1Z1DA37	Bacillus_phage	4.6e-47	56.1
WP_079005091.1\|2229054_2229429_+	hypothetical protein	A0A1P8CWZ2	Bacillus_phage	1.4e-34	61.8
WP_046559767.1\|2229442_2229658_-	hypothetical protein	A0A1P8CX01	Bacillus_phage	1.1e-31	97.2
WP_020954117.1\|2229831_2230014_-	hypothetical protein	NA	NA	NA	NA
WP_045207879.1\|2230058_2230322_-	hypothetical protein	NA	NA	NA	NA
WP_079005090.1\|2230335_2230962_-	DUF1273 family protein	A0A1P8CWY2	Bacillus_phage	4.6e-102	87.6
WP_079005089.1\|2231116_2231455_-	hypothetical protein	NA	NA	NA	NA
WP_079005088.1\|2231784_2231988_-	hypothetical protein	O64115	Bacillus_phage	1.6e-32	92.5
WP_079005087.1\|2232033_2234232_-	AAA family ATPase	Q4Z932	Staphylococcus_phage	1.3e-156	42.2
WP_079005086.1\|2234328_2234712_-	hypothetical protein	A0A1P8CWY3	Bacillus_phage	3.6e-57	91.4
WP_041352901.1\|2234708_2234912_-	hypothetical protein	NA	NA	NA	NA
WP_061573808.1\|2234908_2235319_-	hypothetical protein	A0A1P8CWX0	Bacillus_phage	3.4e-37	60.9
WP_053574311.1\|2235315_2235516_-	hypothetical protein	M4ZRU5	Bacillus_phage	1.0e-26	89.1
2235917:2235939	attL	NA	NA	NA	NA
WP_020954128.1\|2235962_2236208_-	hypothetical protein	A0A1P8CWW5	Bacillus_phage	5.7e-16	52.0
WP_045207904.1\|2236282_2236582_-	hypothetical protein	A0A1P8CWX3	Bacillus_phage	2.7e-20	52.0
WP_014471994.1\|2236746_2236968_+	helix-turn-helix transcriptional regulator	A0A1P8CWW6	Bacillus_phage	1.4e-26	78.1
WP_079005084.1\|2237189_2238173_-\|integrase	integrase	A0A1P8CWX4	Bacillus_phage	4.8e-138	77.1
WP_079005083.1\|2238193_2239543_-	hypothetical protein	A0A1P8CWX1	Bacillus_phage	7.6e-187	74.8
WP_079005082.1\|2239619_2240678_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8CWW9	Bacillus_phage	1.0e-154	75.7
WP_014471999.1\|2240890_2241121_-	hypothetical protein	A0A1P8CWW1	Bacillus_phage	5.5e-21	72.3
WP_014472000.1\|2241135_2241348_-	hypothetical protein	A0A1P8CWW7	Bacillus_phage	1.6e-22	78.5
WP_108490789.1\|2241774_2241915_-	lysogeny pheromone AimP family peptide	NA	NA	NA	NA
WP_079005081.1\|2241936_2243085_-	hypothetical protein	NA	NA	NA	NA
WP_079005080.1\|2243247_2243658_-	pilus assembly protein HicB	A0A1L2JY34	Aeribacillus_phage	1.6e-39	59.7
WP_079005079.1\|2243762_2244452_-	hypothetical protein	NA	NA	NA	NA
WP_095836069.1\|2244522_2244654_-	hypothetical protein	A0A1P8CWV9	Bacillus_phage	1.0e-16	86.0
WP_079005078.1\|2244666_2244882_-	hypothetical protein	A0A1P8CWW0	Bacillus_phage	9.4e-15	56.3
WP_079005077.1\|2244884_2245136_-	hypothetical protein	A0A1P8CWV6	Bacillus_phage	1.2e-21	62.2
WP_014417903.1\|2245206_2245389_+	hypothetical protein	A0A1P8CWV7	Bacillus_phage	1.7e-25	87.9
WP_079005076.1\|2245403_2245628_-	hypothetical protein	NA	NA	NA	NA
WP_079005075.1\|2245673_2246306_-	hypothetical protein	A0A1P8CWV5	Bacillus_phage	2.2e-51	52.4
WP_079005074.1\|2246386_2246860_-	hypothetical protein	NA	NA	NA	NA
WP_079005073.1\|2246872_2247190_-	hypothetical protein	NA	NA	NA	NA
WP_079005072.1\|2247229_2247619_-	hypothetical protein	NA	NA	NA	NA
WP_079005071.1\|2247678_2247993_-	hypothetical protein	NA	NA	NA	NA
WP_014470137.1\|2248110_2248314_-	helix-turn-helix transcriptional regulator	A0A1P8CWU2	Bacillus_phage	4.0e-23	80.3
2253472:2253494	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2262674 : 2312538

Bacillus_phage(85.71%)

capsid,holin,integrase,tail

attL 2270506:2270521|attR 2300523:2300538

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079005057.1\|2262674_2265203_+	hypothetical protein	O64076	Bacillus_phage	0.0e+00	84.0
WP_077722257.1\|2265456_2265732_+	HU family DNA-binding protein	A0A1P8CWT5	Bacillus_phage	3.5e-38	93.4
WP_003230977.1\|2267803_2268004_+	hypothetical protein	NA	NA	NA	NA
WP_079005054.1\|2268015_2269215_+	metallophosphoesterase	A0A0N9SK37	Staphylococcus_phage	8.3e-68	37.5
WP_079005053.1\|2269363_2269864_+\|capsid	capsid protein	A0A1P8CWS3	Bacillus_phage	5.1e-19	31.4
WP_079005052.1\|2269972_2270980_+	hypothetical protein	Q331V7	Clostridium_botulinum_C_phage	2.8e-08	24.2
2270506:2270521	attL	NA	NA	NA	NA
WP_079005051.1\|2270979_2274045_+	heavy metal transporter	A0A0K2FLD6	Brevibacillus_phage	8.1e-51	30.0
WP_079005050.1\|2274063_2275605_+	hypothetical protein	NA	NA	NA	NA
WP_079005049.1\|2275622_2276777_+	hypothetical protein	NA	NA	NA	NA
WP_046559809.1\|2276817_2277282_+	hypothetical protein	NA	NA	NA	NA
WP_046559810.1\|2277305_2278412_+	hypothetical protein	NA	NA	NA	NA
WP_046559811.1\|2278466_2278940_+	hypothetical protein	NA	NA	NA	NA
WP_064778365.1\|2278953_2279340_+	hypothetical protein	NA	NA	NA	NA
WP_079005048.1\|2279349_2280015_+	hypothetical protein	A0A1P8CWR8	Bacillus_phage	4.0e-48	50.0
WP_095836098.1\|2280017_2280518_+	hypothetical protein	A0A1P8CWR3	Bacillus_phage	1.2e-63	68.7
WP_022553075.1\|2280514_2281225_+	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	6.0e-90	64.7
WP_022553074.1\|2281265_2282069_+	hypothetical protein	A0A1P8CWR0	Bacillus_phage	1.3e-69	56.6
WP_064778362.1\|2282084_2282552_+	hypothetical protein	NA	NA	NA	NA
WP_022553073.1\|2282623_2282980_+	hypothetical protein	O64055	Bacillus_phage	8.2e-48	79.7
WP_079005047.1\|2282979_2284314_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	1.3e-26	34.6
WP_076982967.1\|2284647_2284842_+	XkdX family protein	A0A1P8CWR4	Bacillus_phage	2.6e-11	63.0
WP_064778360.1\|2284924_2285410_+	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	1.8e-58	72.3
WP_079005046.1\|2285409_2285826_+	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	7.6e-45	65.5
WP_064778358.1\|2285839_2286817_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2FM05	Brevibacillus_phage	7.9e-109	59.7
WP_064778356.1\|2287416_2288097_+	hypothetical protein	Q37974	Bacillus_phage	8.6e-78	68.3
WP_079005045.1\|2288155_2295040_+\|tail	phage tail tape measure protein	A0A1P8CWQ1	Bacillus_phage	0.0e+00	58.6
WP_079005044.1\|2295097_2295856_+\|tail	phage tail protein	O64045	Bacillus_phage	4.2e-126	84.1
WP_079005043.1\|2299170_2299986_+	hypothetical protein	A0A1P8CWP7	Bacillus_phage	2.1e-94	63.2
WP_079005042.1\|2299999_2302549_+	hypothetical protein	D6R401	Bacillus_phage	4.9e-142	37.5
2300523:2300538	attR	NA	NA	NA	NA
WP_079005041.1\|2302718_2303765_+	N-acetylmuramoyl-L-alanine amidase family protein	A0A1J0MS59	Bacillus_phage	1.1e-87	54.7
WP_014472511.1\|2303871_2304243_+	hypothetical protein	NA	NA	NA	NA
WP_014470077.1\|2304255_2304507_+\|holin	phage holin	A0A1P8CWN5	Bacillus_phage	6.9e-33	85.5
WP_099762739.1\|2304845_2305151_+	hypothetical protein	NA	NA	NA	NA
WP_020954197.1\|2305302_2306463_+	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	1.3e-33	26.5
WP_046559826.1\|2306626_2307877_-	UV damage repair protein UvrX	O64031	Bacillus_phage	2.1e-223	92.1
WP_064778347.1\|2307869_2308202_-	YolD-like family protein	A0A1P8CWP2	Bacillus_phage	6.9e-41	73.6
WP_079005039.1\|2308418_2309177_-	sporulation protein YunB	NA	NA	NA	NA
WP_064778345.1\|2309304_2309646_-	hypothetical protein	NA	NA	NA	NA
WP_076982784.1\|2309848_2309938_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_079005038.1\|2310232_2310784_-	SMI1/KNR4 family protein	A0A1P8CWM6	Bacillus_phage	5.0e-52	57.8
WP_079005037.1\|2310783_2312538_-	hypothetical protein	A0A1P8CWI7	Bacillus_phage	2.0e-240	70.2

DBSCAN-SWA_9

2417349 : 2423602

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003153378.1\|2417349_2417943_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-14	36.6
WP_003153377.1\|2417932_2418688_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.5e-10	25.3
WP_003153376.1\|2418895_2418985_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_003153375.1\|2419072_2419594_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003153374.1\|2419538_2419754_+	hypothetical protein	NA	NA	NA	NA
WP_003153373.1\|2419659_2420034_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_003153372.1\|2420150_2420615_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-43	59.3
WP_003153371.1\|2420647_2421844_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.1e-116	54.9
WP_079005021.1\|2421858_2422506_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.1e-39	44.3
WP_014305330.1\|2422486_2423602_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.5e-55	36.6

DBSCAN-SWA_10

3728562 : 3773684

Cafeteria_roenbergensis_virus(11.11%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003151043.1\|3728562_3729222_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003151042.1\|3729327_3729516_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_003151040.1\|3729553_3729973_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003151038.1\|3730071_3730305_+	hypothetical protein	NA	NA	NA	NA
WP_003151037.1\|3730363_3731743_+	amino acid permease	NA	NA	NA	NA
WP_003151036.1\|3731806_3732307_-	YwgA family protein	NA	NA	NA	NA
WP_003151035.1\|3732346_3733648_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.0e-23	29.5
WP_003151034.1\|3733808_3734033_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_003151032.1\|3734237_3735011_+	RsfA family transcriptional regulator	NA	NA	NA	NA
WP_003151030.1\|3735311_3735587_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_024085924.1\|3735587_3736142_+	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_060387228.1\|3736239_3737160_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	8.4e-36	38.3
WP_003151025.1\|3737156_3738110_+	ABC transporter permease	NA	NA	NA	NA
WP_014306028.1\|3738099_3738936_-	hypothetical protein	NA	NA	NA	NA
WP_014306029.1\|3738926_3739724_-	hypothetical protein	NA	NA	NA	NA
WP_063174469.1\|3739692_3740616_-	hypothetical protein	NA	NA	NA	NA
WP_003151018.1\|3740664_3740844_-	hypothetical protein	NA	NA	NA	NA
WP_063174468.1\|3740995_3741859_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_003151014.1\|3741905_3742805_-	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	2.1e-07	40.2
WP_015387551.1\|3742920_3743898_+	putative sulfate exporter family transporter	NA	NA	NA	NA
WP_003151012.1\|3743934_3744906_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_003151011.1\|3745168_3745933_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_003151010.1\|3746052_3746832_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_052586859.1\|3746848_3748048_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003151007.1\|3748060_3749242_-	MFS transporter	NA	NA	NA	NA
WP_057080304.1\|3749238_3750657_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_003151003.1\|3750674_3751436_-	dihydroanticapsin 7-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	4.4e-22	30.5
WP_015387548.1\|3751432_3752143_-	cupin domain-containing protein	NA	NA	NA	NA
WP_003150997.1\|3752132_3752747_-	bacilysin biosynthesis protein BacA	NA	NA	NA	NA
WP_014306036.1\|3752908_3754147_-	MFS transporter	NA	NA	NA	NA
WP_052586863.1\|3754370_3755573_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	8.4e-28	26.6
WP_014306038.1\|3755605_3757024_-	amino acid permease	NA	NA	NA	NA
WP_014306039.1\|3757048_3758731_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_003150992.1\|3758802_3760350_-	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015387545.1\|3760557_3761844_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_003150988.1\|3762029_3762491_-	hypothetical protein	NA	NA	NA	NA
WP_015387544.1\|3762706_3763162_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003150984.1\|3763158_3764007_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.4e-37	37.3
WP_014306044.1\|3764027_3764975_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.7e-69	42.9
WP_003150981.1\|3764977_3765715_-	NTP transferase domain-containing protein	G3MA50	Bacillus_virus	5.0e-47	42.7
WP_063174466.1\|3765742_3766747_-\|coat	spore coat protein	NA	NA	NA	NA
WP_014306047.1\|3766748_3767492_-\|coat	spore coat protein	NA	NA	NA	NA
WP_060387235.1\|3767481_3768603_-\|coat	spore coat protein	NA	NA	NA	NA
WP_025853631.1\|3768602_3769466_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003150976.1\|3769466_3770636_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_015387538.1\|3770658_3772083_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_024085938.1\|3772087_3772858_-	glycosyltransferase family 2 protein	A0A0F7L2F7	uncultured_marine_virus	4.4e-06	26.3
WP_003150971.1\|3773138_3773684_+\|coat	spore coat protein GerQ	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage