CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP041251	Raoultella electrica strain DSM 102253 plasmid unnamed4, complete sequence	0 crisprs	NA	0	0	0
NZ_CP041248	Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence	0 crisprs	csa3,DinG	0	0	3
NZ_CP041252	Raoultella electrica strain DSM 102253 plasmid unnamed5, complete sequence	0 crisprs	NA	0	0	0
NZ_CP041250	Raoultella electrica strain DSM 102253 plasmid unnamed3, complete sequence	0 crisprs	RT	0	0	1
NZ_CP041247	Raoultella electrica strain DSM 102253 chromosome, complete genome	6 crisprs	csa3,cas3,DEDDh,DinG,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,WYL	1	25	5
NZ_CP041249	Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence	1 crisprs	cas3,csa3	0	1	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2881 : 58441

Stx2-converting_phage(23.08%)

integrase,transposase

attL 1754:1766|attR 63255:63267

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1754:1766	attL	NA	NA	NA	NA
WP_004197635.1\|2881_3676_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
WP_019706038.1\|3829_5857_+	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	2.1e-26	26.6
WP_032436768.1\|5853_7128_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_019705992.1\|7128_10386_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_142255980.1\|10390_11659_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.5e-59	33.1
WP_020315256.1\|11993_13010_-	hypothetical protein	NA	NA	NA	NA
WP_022644730.1\|13006_13330_-	hypothetical protein	NA	NA	NA	NA
WP_072158608.1\|13356_13752_-	hypothetical protein	NA	NA	NA	NA
WP_001568026.1\|13920_14226_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_001568025.1\|14227_14446_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_023340900.1\|15023_16106_+	hypothetical protein	NA	NA	NA	NA
WP_032415726.1\|20341_20590_+	hypothetical protein	NA	NA	NA	NA
WP_040214107.1\|20586_21159_+	hypothetical protein	NA	NA	NA	NA
WP_065242274.1\|21189_21684_+	DNA-binding protein	NA	NA	NA	NA
WP_001568014.1\|21916_22225_-	hypothetical protein	NA	NA	NA	NA
WP_074405024.1\|22718_23267_+	thioredoxin fold domain-containing protein	NA	NA	NA	NA
WP_023316587.1\|23462_25001_-\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.1e-281	94.7
WP_000612626.1\|25049_25397_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000839182.1\|25393_25798_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.6e-68	97.8
WP_167686290.1\|25796_26210_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_001567368.1\|26480_27884_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_001567369.1\|27912_28545_-	hypothetical protein	NA	NA	NA	NA
WP_086074166.1\|28721_29045_-	hypothetical protein	NA	NA	NA	NA
WP_117254344.1\|29218_30250_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_167686291.1\|30620_30797_+	hypothetical protein	NA	NA	NA	NA
WP_009310076.1\|30897_31878_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.2e-184	98.5
WP_000509966.1\|32214_32820_-	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_023307208.1\|32914_35812_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	5.5e-182	37.8
WP_023280901.1\|36187_36457_+	hypothetical protein	NA	NA	NA	NA
WP_023280902.1\|36471_36810_+	hypothetical protein	NA	NA	NA	NA
WP_074186234.1\|37000_37444_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_142255981.1\|37668_38352_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	4.1e-128	100.0
WP_142255982.1\|38388_38802_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA
WP_142255983.1\|38801_41441_-	type IV secretion system protein TraC	NA	NA	NA	NA
WP_014343490.1\|41512_41911_-	hypothetical protein	NA	NA	NA	NA
WP_004197817.1\|42286_42691_-	hypothetical protein	NA	NA	NA	NA
WP_142255984.1\|42757_43069_-	hypothetical protein	NA	NA	NA	NA
WP_014386199.1\|43069_43288_-	hypothetical protein	NA	NA	NA	NA
WP_020805158.1\|43630_43810_-	hypothetical protein	NA	NA	NA	NA
WP_020277945.1\|44183_44768_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA
WP_142255985.1\|44841_46266_-	F-type conjugal transfer pilus assembly protein TraB	NA	NA	NA	NA
WP_048235042.1\|46265_47006_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_004144423.1\|46992_47559_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
WP_142255986.1\|47578_47884_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_019706001.1\|48253_49201_-\|transposase	IS30-like element ISAs2 family transposase	Q9MBM9	Staphylococcus_prophage	1.4e-41	35.7
WP_041204928.1\|49327_50455_+\|transposase	ISAs1-like element ISKpn9 family transposase	NA	NA	NA	NA
WP_046664192.1\|50713_50914_-	TraY domain-containing protein	NA	NA	NA	NA
WP_025712700.1\|50999_51701_-	hypothetical protein	NA	NA	NA	NA
WP_004194114.1\|51930_52323_-	relaxosome protein TraM	NA	NA	NA	NA
WP_001568108.1\|52754_53240_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_011977736.1\|53272_53602_-	hypothetical protein	NA	NA	NA	NA
WP_004182076.1\|53634_54456_-	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	1.2e-44	40.1
WP_001101446.1\|54808_55834_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_167686292.1\|56128_57097_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.5e-179	96.0
WP_001101446.1\|57415_58441_-\|transposase	IS110 family transposase	NA	NA	NA	NA
63255:63267	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041248

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6141 : 42163

Escherichia_phage(33.33%)

integrase,transposase

attL 2805:2818|attR 30816:30829

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2805:2818	attL	NA	NA	NA	NA
WP_001067855.1\|6141_6846_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_009310076.1\|8050_9031_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.2e-184	98.5
WP_016807539.1\|9559_9997_-	hypothetical protein	NA	NA	NA	NA
WP_016807538.1\|9996_10674_-	hypothetical protein	NA	NA	NA	NA
WP_001000409.1\|11359_12895_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	2.0e-260	87.7
WP_000609174.1\|12944_13292_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-59	95.7
WP_001201739.1\|13288_13672_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	4.1e-13	36.3
WP_016807536.1\|15778_17236_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_007372207.1\|17387_17576_-	hypothetical protein	NA	NA	NA	NA
WP_009652915.1\|17611_18802_-	hypothetical protein	NA	NA	NA	NA
WP_099531002.1\|18914_19316_-	hypothetical protein	NA	NA	NA	NA
WP_007372203.1\|19473_19980_+	hypothetical protein	NA	NA	NA	NA
WP_001254932.1\|20761_21913_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_016241518.1\|22971_23397_-	hypothetical protein	NA	NA	NA	NA
WP_099531012.1\|23410_23686_-	hypothetical protein	NA	NA	NA	NA
WP_009652923.1\|23972_24287_-	hypothetical protein	NA	NA	NA	NA
WP_001567368.1\|24501_25905_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_001567369.1\|25933_26566_-	hypothetical protein	NA	NA	NA	NA
WP_001567368.1\|26784_28188_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_001567369.1\|28216_28849_-	hypothetical protein	NA	NA	NA	NA
WP_076611902.1\|29076_30423_+\|transposase	ISNCY-like element ISLad2 family transposase	NA	NA	NA	NA
WP_000589340.1\|30481_31285_+	hypothetical protein	NA	NA	NA	NA
30816:30829	attR	NA	NA	NA	NA
WP_000482601.1\|31298_32660_+	FRG domain-containing protein	NA	NA	NA	NA
WP_016239970.1\|32812_33253_+	hypothetical protein	NA	NA	NA	NA
WP_016239971.1\|33270_34077_+	hypothetical protein	NA	NA	NA	NA
WP_045269655.1\|34442_34847_+	hypothetical protein	NA	NA	NA	NA
WP_045269657.1\|34843_35179_+	hypothetical protein	NA	NA	NA	NA
WP_045269654.1\|35195_35555_+	hypothetical protein	NA	NA	NA	NA
WP_045269653.1\|36337_37270_+	hypothetical protein	A0A223LHZ3	Pseudoalteromonas_phage	1.1e-11	30.8
WP_007372199.1\|38205_39168_+	plasmid stabilization protein	A0A222YXF2	Escherichia_phage	9.6e-59	41.1
WP_009652914.1\|39181_39568_+	plasmid stability protein	NA	NA	NA	NA
WP_080940394.1\|39594_40311_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_043016718.1\|40635_41241_-	hypothetical protein	NA	NA	NA	NA
WP_141963343.1\|41318_42163_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	8.3e-22	47.8

DBSCAN-SWA_2

74138 : 119164

Salmonella_phage(62.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001572362.1\|74138_75161_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_045269834.1\|75184_78223_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	5.0e-295	53.5
WP_045269835.1\|78390_79032_+	recombinase family protein	NA	NA	NA	NA
WP_025760366.1\|79295_80954_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000928911.1\|81114_81465_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000043177.1\|81769_82246_-	DNA starvation/stationary phase protection protein	G0X506	Salmonella_phage	6.7e-05	28.7
WP_016241611.1\|82360_82798_-	PaaI family thioesterase	NA	NA	NA	NA
WP_000626969.1\|82958_83420_-	hypothetical protein	NA	NA	NA	NA
WP_001137910.1\|83394_83715_-	DUF134 domain-containing protein	NA	NA	NA	NA
WP_000427614.1\|84174_85179_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_045269836.1\|85257_86655_-	DUF4158 domain-containing protein	A0A1B0V7H9	Salmonella_phage	1.3e-117	32.1
WP_001162010.1\|86657_87215_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	3.4e-48	81.3
WP_032492248.1\|87344_87557_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001446012.1\|87519_87639_+	hypothetical protein	NA	NA	NA	NA
WP_001087807.1\|87622_87859_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|87855_88221_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|88238_89924_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|89962_90388_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|90415_90691_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294653.1\|90706_91102_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|91173_91629_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_012561145.1\|92086_93247_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_012561144.1\|93288_94284_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_000792636.1\|94283_94817_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
WP_000091613.1\|94989_95304_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|95558_95915_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|95904_96306_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|96302_96593_-	nucleotidyltransferase	NA	NA	NA	NA
WP_032640605.1\|96751_99718_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_022542389.1\|99796_100801_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_011191356.1\|101395_102445_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_011191355.1\|102441_103662_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_018429611.1\|103661_103901_+	DUF2274 domain-containing protein	NA	NA	NA	NA
WP_011191354.1\|103897_104794_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004357616.1\|105050_105584_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004099025.1\|105610_106570_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_004099026.1\|106608_106995_-	hypothetical protein	NA	NA	NA	NA
WP_004099027.1\|107265_107754_+	DUF417 family protein	NA	NA	NA	NA
WP_004357657.1\|107812_107995_+	hypothetical protein	NA	NA	NA	NA
WP_026227539.1\|108230_108806_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004357654.1\|109202_110228_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_025760400.1\|110227_110821_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_045269764.1\|110823_112056_-	OsmC family protein	NA	NA	NA	NA
WP_004099034.1\|112200_113160_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004099035.1\|113305_113749_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_004099036.1\|113750_114290_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_004099038.1\|114422_115127_+	glutathione S-transferase	NA	NA	NA	NA
WP_045269763.1\|115123_116092_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_012817690.1\|116155_119164_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.5

DBSCAN-SWA_3

133738 : 174584

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004099053.1\|133738_134707_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.8
WP_022631502.1\|135007_135208_+	hypothetical protein	NA	NA	NA	NA
WP_023307208.1\|135737_138635_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	5.5e-182	37.8
WP_000509966.1\|138729_139335_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_016241527.1\|139724_142412_-	cation-transporting P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	1.2e-71	27.5
WP_016241528.1\|142462_142894_-	universal stress protein	A0A1W6JNV4	Morganella_phage	2.0e-24	44.1
WP_016241530.1\|143418_144504_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_045270087.1\|144503_147560_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	2.5e-52	22.0
WP_024196075.1\|147752_148676_+	acyltransferase	NA	NA	NA	NA
WP_045270086.1\|148683_149259_-	lipid IV(A) palmitoyltransferase PagP	NA	NA	NA	NA
WP_001166628.1\|149307_149763_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294653.1\|149834_150230_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_000732275.1\|150245_150521_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000522996.1\|150548_150974_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000209296.1\|151012_152698_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_001277466.1\|152715_153081_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_001087807.1\|153077_153314_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001446012.1\|153297_153417_-	hypothetical protein	NA	NA	NA	NA
WP_000993245.1\|153379_153592_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001162010.1\|153721_154279_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	3.4e-48	81.3
WP_001067855.1\|154363_155068_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001752509.1\|155388_155889_-	non-heme ferritin-like protein	NA	NA	NA	NA
WP_004118358.1\|156215_156920_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.6e-138	99.6
WP_016947617.1\|157039_158020_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	98.8
WP_000780222.1\|158297_158579_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_000493286.1\|158559_158889_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
WP_001572362.1\|159935_160958_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_167686288.1\|161142_164169_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.1
WP_001067855.1\|164145_164850_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000948259.1\|168563_169205_-	hypothetical protein	NA	NA	NA	NA
WP_000449980.1\|169204_170143_-	MCE family protein	NA	NA	NA	NA
WP_000254595.1\|170144_170948_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.8e-10	27.7
WP_001325018.1\|170941_172087_-	ABC transporter permease	NA	NA	NA	NA
WP_001067855.1\|172510_173215_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_085954994.1\|173457_174584_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-48	40.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP041247

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041247_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041247_1

140578-140696

Orphan

Consensus_repeat	Method
GGTATGTAGCCCGGATAAGGCGCGATGCGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041247_1

>merge|NZ_CP041247|1|140578-140696|CRISPRCasFinder
GGTATGTAGCCCGGATAAGGCGCGATGCGCCGCTTCCGGGAGTTTCCCCGGCTTGTGCTGCGCTTATCCGGGCTACGGTCTGGCCTGGTATGTAGCCCGGATAAGGCGCGATGCGCCGC

>NZ_CP041247|1|1|140578-140696|CRISPRCasFinder
GGTATGTAGCCCGGATAAGGCGCGATGCGCCGC	TTCCGGGAGTTTCCCCGGCTTGTGCTGCGCTTATCCGGGCTACGGTCTGGCCT
GGTATGTAGCCCGGATAAGGCGCGATGCGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041247.1\|WP_160704216.1\|133291_134242_-\|divergent-polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|225416
NZ_CP041247.1\|WP_131049334.1\|134245_135517_-\|murein-hydrolase-activator-EnvC	unknown	unknown	gnl\|CDD\|236942
NZ_CP041247.1\|WP_100682916.1\|137316_137748_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP041247.1\|WP_141963053.1\|130926_132120_+\|glycine-C-acetyltransferase	unknown	unknown	gnl\|CDD\|235893
NZ_CP041247.1\|WP_100682924.1\|145317_145680_-\|YibL-family-ribosome-associated-protein	unknown	unknown	gnl\|CDD\|182904
NZ_CP041247.1\|WP_004106845.1\|139733_140555_+\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|182987
NZ_CP041247.1\|WP_100682919.1\|140715_141189_-\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	unknown	unknown	gnl\|CDD\|182406
NZ_CP041247.1\|WP_100682918.1\|138636_139653_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
NZ_CP041247.1\|WP_131049336.1\|143235_144891_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|182445
NZ_CP041247.1\|WP_004868904.1\|138169_138637_+\|protein-export-chaperone-SecB	unknown	unknown	gnl\|CDD\|180234
NZ_CP041247.1\|WP_100682917.1\|137859_138111_+\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|182607
NZ_CP041247.1\|WP_100682921.1\|142465_143239_-\|transcriptional-regulator-LldR	unknown	unknown	gnl\|CDD\|236690
NZ_CP041247.1\|WP_100682912.1\|132129_133155_+\|L-threonine-3-dehydrogenase	unknown	unknown	gnl\|CDD\|180054
NZ_CP041247.1\|WP_141963057.1\|135526_137071_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463
NZ_CP041247.1\|WP_141963059.1\|146764_147913_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP041247.1\|WP_100682925.1\|145955_146162_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041247.1\|WP_141963061.1\|148049_149960_-\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP041247.1\|WP_100682926.1\|146168_146768_-\|MltR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236817
NZ_CP041247.1\|WP_100682920.1\|141281_142466_-\|FMN-dependent-L-lactate-dehydrogenase-LldD	unknown	unknown	gnl\|CDD\|183033
NZ_CP041247.1\|WP_141963063.1\|150595_151204_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|182405

Protein	Function_ID	Function_description	E-value
NZ_CP041247.1\|WP_160704216.1\|133291_134242_-\|divergent-polysaccharide-deacetylase-family-protein	gnl\|CDD\|225416	COG2861, COG2861, Uncharacterized protein conserved in bacteria [Function unknown].	1.40234e-111
NZ_CP041247.1\|WP_131049334.1\|134245_135517_-\|murein-hydrolase-activator-EnvC	gnl\|CDD\|236942	PRK11637, PRK11637, AmiB activator; Provisional.	0
NZ_CP041247.1\|WP_100682916.1\|137316_137748_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	4.04564e-27
NZ_CP041247.1\|WP_141963053.1\|130926_132120_+\|glycine-C-acetyltransferase	gnl\|CDD\|235893	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.	0
NZ_CP041247.1\|WP_100682924.1\|145317_145680_-\|YibL-family-ribosome-associated-protein	gnl\|CDD\|182904	PRK11020, PRK11020, YibL family ribosome-associated protein.	9.3429e-57
NZ_CP041247.1\|WP_004106845.1\|139733_140555_+\|serine-O-acetyltransferase	gnl\|CDD\|182987	PRK11132, cysE, serine acetyltransferase; Provisional.	0
NZ_CP041247.1\|WP_100682919.1\|140715_141189_-\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	gnl\|CDD\|182406	PRK10358, PRK10358, tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL.	2.16385e-115
NZ_CP041247.1\|WP_100682918.1\|138636_139653_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	0
NZ_CP041247.1\|WP_131049336.1\|143235_144891_-\|L-lactate-permease	gnl\|CDD\|182445	PRK10420, PRK10420, L-lactate permease; Provisional.	0
NZ_CP041247.1\|WP_004868904.1\|138169_138637_+\|protein-export-chaperone-SecB	gnl\|CDD\|180234	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated.	1.08647e-90
NZ_CP041247.1\|WP_100682917.1\|137859_138111_+\|glutaredoxin-3	gnl\|CDD\|182607	PRK10638, PRK10638, glutaredoxin 3; Provisional.	1.72096e-58
NZ_CP041247.1\|WP_100682921.1\|142465_143239_-\|transcriptional-regulator-LldR	gnl\|CDD\|236690	PRK10421, PRK10421, DNA-binding transcriptional repressor LldR; Provisional.	4.04565e-156
NZ_CP041247.1\|WP_100682912.1\|132129_133155_+\|L-threonine-3-dehydrogenase	gnl\|CDD\|180054	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated.	0
NZ_CP041247.1\|WP_141963057.1\|135526_137071_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
NZ_CP041247.1\|WP_141963059.1\|146764_147913_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP041247.1\|WP_141963061.1\|148049_149960_-\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP041247.1\|WP_100682926.1\|146168_146768_-\|MltR-family-transcriptional-regulator	gnl\|CDD\|236817	PRK11001, mtlR, MltR family transcriptional regulator.	1.41346e-101
NZ_CP041247.1\|WP_100682920.1\|141281_142466_-\|FMN-dependent-L-lactate-dehydrogenase-LldD	gnl\|CDD\|183033	PRK11197, lldD, L-lactate dehydrogenase; Provisional.	0
NZ_CP041247.1\|WP_141963063.1\|150595_151204_+\|glutathione-S-transferase	gnl\|CDD\|182405	PRK10357, PRK10357, putative glutathione S-transferase; Provisional.	2.0123e-129

>NZ_CP041247.1|WP_004106845.1|139733_140555_+|serine-O-acetyltransferase
MPCEELDIVWNNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLASPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVSFQVDIHPAAKIGRGIMLDHATGIVVGETAVIEDDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPESDKPAMDMDQHFNGIHHTFEYGDGI
>NZ_CP041247.1|WP_100682918.1|138636_139653_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MNALNAAMTVIGAGSYGTALAITLARNGHDVVLWGHDPKHIATLQHDRCNAAFLPDVPFPDTLHLESDLSAALAASRDILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDTIPLAVISGPTFAKELAAGLPTAISLASTEPQFADDLQHLLHCGKSFRVYINPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVEMSRLGTALGADPETFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQDKIGQVVEGYRNTREVRVLAQRLGVEMPITEEIYQVLYCGKIAREAALTLLGRARKDERSN
>NZ_CP041247.1|WP_004868904.1|138169_138637_+|protein-export-chaperone-SecB
MSEQNSTEMTFQIQRIYTKDISFEAPNAPQVFQKDWQPEVKLDLDTASSQLAEGVYEVVLRVTVTAALGEETAFLCEVQQGGIFSIDGIDGNQMAHCLGAYCPNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGAEQHQDA
>NZ_CP041247.1|WP_100682917.1|137859_138111_+|glutaredoxin-3
MANIDIYTKATCPFCIRAKALLNSKGVTFNELPIDGNAAKREEMIERSGRTTVPQIFIDEQHIGGCDDLYALDSRGGLDPLLR
>NZ_CP041247.1|WP_100682916.1|137316_137748_+|rhodanese-like-domain-containing-protein
MQEIMQFVGRHPVLSIAWIALLVAVLFTTFKGLMSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKAQPIIVVDGSGMQAQEPASALNKAGFEKVFVLKEGIAGWSGENLPLVRGK
>NZ_CP041247.1|WP_141963057.1|135526_137071_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MSNSKKPMVLVILDGYGYREDQQDNAIYSAKTPVMDALWAKRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTAAVDKAVAAGKAVHIMGLMSPGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAENSLAKFEEKFVALGKGRVASIIGRYYAMDRDNRWDRVEQAYDLMTLAQGEFQADSAVAGLQAAYARDENDEFVKATVIRANGQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKEVKLDFVMLTEYAADIKVACAYPPASLANTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEEPFKGEERILINSPKVATYDLQPEMSSAELTEKLVAAIKGGQYDTIICNYPNGDMVGHTGVMEAAIKAVETLDNCIDQVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKSVKVAEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE
>NZ_CP041247.1|WP_131049334.1|134245_135517_-|murein-hydrolase-activator-EnvC
MRGKATYSNTWIATAVRSVLYASALSAGVLLCAAPAQADDRDQLKSIQADIAAKQRAIQQQQQQRSSLLAQLRAQEEAISAATRKLRETQDTLNQLNRQIDEMNASIAKLERQRATQERNLSAQLDAAFRQGPHTGMQMILSGEEGQRNQRMQVYYGYLNQARQETIAQLKQTREEVSAQKAQLEEKQSQQQTLVYEQRAQQAKLEQARNERKKTLSGLESSIQQGQQQLGEMRANESRLRGRIAQAEAAAKARAESEAREAQAVRDRQQDASRKGTTYKPTESERSLMSRTGGLGSPRGQAYWPVRGTLLHRYGEQLQGELRWKGMVIAASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR
>NZ_CP041247.1|WP_160704216.1|133291_134242_-|divergent-polysaccharide-deacetylase-family-protein
MLQFRRIAFAVAGTLAMASPAFAGKLSIVIDDFGYRPQTENQVLALPATISVAVLPNAPHAREMASKAHNLGHEVLIHLPMAPLSKQPLEKDTLRPDMSSDEIERIIRDAYGKVPYAVGLNNHMGSAMTSSLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDTQNEADIRVQFNRAIALARRNGSAIAIGHPHPTTVRVLQQMVYNLPPDITLVRPSNLLNEPQVDTSRPDSGLPPSATTPPTSPRNPFRGVKFCKTKHPPEPVYASRFFSVLSESISHSPLVQYYQLKWQGWDNPTN
>NZ_CP041247.1|WP_100682912.1|132129_133155_+|L-threonine-3-dehydrogenase
MKALSKLKAEEGIWMTDVPEPEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLGLARKMGVTRAVNVARESLADVMAELGMSEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFAIDEFQQGFDAMRSGQSGKVVLSWD
>NZ_CP041247.1|WP_141963053.1|130926_132120_+|glycine-C-acetyltransferase
MRGDFYEQLINSLETARAEGLFKEERIITSAQQADITVGGSNVINFCANNYLGLANHPQLIAAAKAGMDSHGFGMASVRFICGTQDSHKALEKKLAEFLGMEDAILYSSCFDANGGLFETLLGPEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQGLEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCAVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVESGAELRDRLWANARLFREKMTAAGFTLAGADHAIIPVMLGDAVIAQNFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQIERAVEAFTRIGKQLGVIA
>NZ_CP041247.1|WP_100682919.1|140715_141189_-|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL
MLNIVLFEPEIPPNTGNIIRLCANTGFNLHIIEPMGFTWDDKRLRRAGLDYHEFTAVQRHRDYAAFVESARPQRLFALTTKGTPAHSAVSYQDGDFLMFGPETRGLPASILDALPAQQKIRIPMMPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRS
>NZ_CP041247.1|WP_100682920.1|141281_142466_-|FMN-dependent-L-lactate-dehydrogenase-LldD
MIISAASDYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRVLKNMSDLSLETTLFKEKLSMPVALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAMTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPQDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLTGTKTIGEISRDSLVQNADALQTFNAIKQGNAA
>NZ_CP041247.1|WP_100682921.1|142465_143239_-|transcriptional-regulator-LldR
MIVMPRRLADDVVRRVRALIEEQKLEAGMRLPAERQLAAQLGVSRNSLREALAMLVNEGLLVSRRGGGTFVRWQHETWSEQNIVQPLKTLLADDPDYSFDILEARHAIEASTAWHAAMRATDAEKERIRLCFEATQSEDPDLASQADVRFHLAIAEASHNVVLLQTMRGFFDLLQSSVKQSRQRMYLVPPVFARLTEQHQAVMEAIFAGDAEGARQAMMAHLGFVHATIKHFDEDQARQARITRLPGDHNENARENP
>NZ_CP041247.1|WP_131049336.1|143235_144891_-|L-lactate-permease
MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYLAATWTVAIALSVALLFYKMPVDRALTSVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLIVGFSFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLCLIVNTAPVAFGAMGIPILVAGQVTGIDSFAIGQMVGRQLPFLTIIVLFWIMAIMDGWRGVKETWPAVMVAGGSFAIAQYLSSNFLGPELPDIISSLVSLVCLTLFLKRWQPVRIFRFGDMGAAQVDQTLARTHYSAGQIARAWSPFLFLTATVTLWSIPPFKALFAPGGAMYDFVINISVPFLDKMVARMPPVVSAATPYAAVYKFDWLSATGTAILFAALLSIVWLRMKPKDALVTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGVSDILLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP
>NZ_CP041247.1|WP_100682924.1|145317_145680_-|YibL-family-ribosome-associated-protein
MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKTTLEAEIIRLREVQGQKLSKEAQKLMSLPHRRAITKKEQADMGKLKKSVRGLVIVHPMTALGREMNLKEMTGFSKTEF
>NZ_CP041247.1|WP_100682925.1|145955_146162_+|hypothetical-protein
MAKIGDGVPRIIDKTVDFMASSQAFMEYLKKSPRLQHVPREIPQNKEALFLSRLEYYRQLYRPTCDQV
>NZ_CP041247.1|WP_100682926.1|146168_146768_-|MltR-family-transcriptional-regulator
MRQDLARYEPRPLLLLSDMQAIMEETQAFENRVLERLNAGKTVRSFLITTVELLTEAVNILVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVISRAEYEDAELLMALREELNHDGNEYGFTDDEILGPFGELHCVTALPPTPLFDESDEELLAMQKLRYQQVVRSTMMLSLTELISRISLKKAFQKSTL
>NZ_CP041247.1|WP_141963059.1|146764_147913_-|mannitol-1-phosphate-5-dehydrogenase
MNALHFGAGNIGRGFIGKLLADAGIALTFADVNQVVLDALNARHSYQVHVVGENEQVDTVSGVNAVSSIGDEVIDLIARVDLITTAVGPVVLERIAPAIAQGLAQRKAQGITAPLNIIACENMVRGTTQLKGHVFNALAEEDKAWVEANVGFVDSAVDRIVPPSASATHDPLEVTVETFSEWIVDKTQFKGTLPAIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIREAILDENIRAVVKGAMEESGAVLIKRYGFDAQKHAAYIQKILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYALPHVNLVKGIAAAMHFRSEEDPQAQELADLINEKGPQAALAQISGLDAASAVVTEAVNDYNATK
>NZ_CP041247.1|WP_141963061.1|148049_149960_-|PTS-mannitol-transporter-subunit-IICBA
MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLLPLLIGYTGGKLIGGERGGVVGAITTMGVIVGADMPMFLGAMIAGPLGGWAIKHFDSWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPAVEVLSKILAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIEANPGPGMGVLMAYMFFGRGNAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILNGGLVSPASPGSILAVLAMTPKGAYFANIAAIIAAMVVSFVISAILLKTSKVKEEDDIDAATRRMQDMKAESKGAATPLSAGTVANDLSHVRKIIVACDAGMGSSAMGAGVLRKKVQDAGLSNISVTNCAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTNLTERLVAAQRHTDNEKKVHGSLKDSFDAPETNLFKLGEENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTSTYLGESIAVPHGTIEAKDRVLKTGVVFCQYPEGVRFGEDEDDVARLVIGIAARNNEHIQVITSLTNALDDESVIERLTHTTSVEEVLSLLKV
>NZ_CP041247.1|WP_141963063.1|150595_151204_+|glutathione-S-transferase
MKLIGSYTSPFVRKISVILLEKNLPFEFVNEFPYQEVNGVGKYNPLGKVPVLVTDSGECWYDSPIIAQYLEQLDAAPGMVPSDPNAALKMRQLEALADGVMEAAQALVREKTRPAAQQSESELLRQREKVARGLDELEARVADGSLRIDEVNLATISAACAIAYLNFRRVAPGWCATRPQLIKLVDALFQRASFARTEPPRT

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Crispr_ID: NZ_CP041247_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041247_2

888817-888949

Orphan

Consensus_repeat	Method
TTTTGTAGCCCGGGTCAGGCGTTTACGCCGCGACCCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041247_2

>merge|NZ_CP041247|2|888817-888949|CRISPRCasFinder
TTTTGTAGCCCGGGTCAGGCGTTTACGCCGCGACCCGGGAATCTCCCCGGCTCGCGCTGCGCTTAGCCGGGCTACCGTATCCTGCATGCGGCGGTTTTGTAGCCCGGGTAAGGCGTTTACGCCGCGACCCGGG

>NZ_CP041247|2|2|888817-888949|CRISPRCasFinder
TTTTGTAGCCCGGGTCAGGCGTTTACGCCGCGACCCGGG	AATCTCCCCGGCTCGCGCTGCGCTTAGCCGGGCTACCGTATCCTGCATGCGGCGG
TTTTGTAGCCCGGGTAAGGCGTTTACGCCGCGACCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041247.1\|WP_141963599.1\|896668_897463_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|234984
NZ_CP041247.1\|WP_100686116.1\|893275_895522_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|182937
NZ_CP041247.1\|WP_141963597.1\|891354_892050_-\|DNA-mismatch-repair-endonuclease-MutH	unknown	unknown	gnl\|CDD\|179923
NZ_CP041247.1\|WP_131048659.1\|890234_890453_-\|YgdI/YgdR-family-lipoprotein	unknown	unknown	gnl\|CDD\|380215
NZ_CP041247.1\|WP_131048658.1\|888958_889999_-\|NADP(H)-dependent-aldo-keto-reductase	unknown	unknown	gnl\|CDD\|236727
NZ_CP041247.1\|WP_100686121.1\|890577_891291_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP041247.1\|WP_160703337.1\|892066_892279_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041247.1\|WP_141963586.1\|880598_881861_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|236867
NZ_CP041247.1\|WP_141963593.1\|885234_887394_+\|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase	unknown	unknown	gnl\|CDD\|181207
NZ_CP041247.1\|WP_100686130.1\|878857_879550_+\|aspartate/glutamate-racemase	unknown	unknown	gnl\|CDD\|182300
NZ_CP041247.1\|WP_141963584.1\|879536_880463_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236819
NZ_CP041247.1\|WP_100686117.1\|892732_893263_+\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_CP041247.1\|WP_131048655.1\|883075_883555_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP041247.1\|WP_100686115.1\|895786_896662_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
NZ_CP041247.1\|WP_004115132.1\|877005_877896_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP041247.1\|WP_167686260.1\|881857_882856_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380494
NZ_CP041247.1\|WP_131048664.1\|897650_898118_+\|prepilin-peptidase-dependent-protein	unknown	unknown	gnl\|CDD\|236704
NZ_CP041247.1\|WP_141963582.1\|878396_878717_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380366
NZ_CP041247.1\|WP_141963595.1\|887386_888580_+\|lysophospholipid-transporter-LplT	unknown	unknown	gnl\|CDD\|236879
NZ_CP041247.1\|WP_141963591.1\|883515_884532_-\|HTH-type-transcriptional-regulator-GalR	unknown	unknown	gnl\|CDD\|182681

Protein	Function_ID	Function_description	E-value
NZ_CP041247.1\|WP_141963599.1\|896668_897463_+\|thymidylate-synthase	gnl\|CDD\|234984	PRK01827, thyA, thymidylate synthase; Reviewed.	0
NZ_CP041247.1\|WP_100686116.1\|893275_895522_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|182937	PRK11061, PRK11061, phosphoenolpyruvate--protein phosphotransferase.	0
NZ_CP041247.1\|WP_141963597.1\|891354_892050_-\|DNA-mismatch-repair-endonuclease-MutH	gnl\|CDD\|179923	PRK05070, PRK05070, DNA mismatch repair protein; Provisional.	9.49888e-166
NZ_CP041247.1\|WP_131048659.1\|890234_890453_-\|YgdI/YgdR-family-lipoprotein	gnl\|CDD\|380215	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein. Members of this family are exclusively lipoproteins of small size, including YgdI and YgdR from E. coli K-12.	4.22227e-34
NZ_CP041247.1\|WP_131048658.1\|888958_889999_-\|NADP(H)-dependent-aldo-keto-reductase	gnl\|CDD\|236727	PRK10625, tas, putative aldo-keto reductase; Provisional.	0
NZ_CP041247.1\|WP_100686121.1\|890577_891291_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	5.2736e-78
NZ_CP041247.1\|WP_141963586.1\|880598_881861_+\|diaminopimelate-decarboxylase	gnl\|CDD\|236867	PRK11165, PRK11165, diaminopimelate decarboxylase; Provisional.	0
NZ_CP041247.1\|WP_141963593.1\|885234_887394_+\|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase	gnl\|CDD\|181207	PRK08043, PRK08043, bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase.	0
NZ_CP041247.1\|WP_100686130.1\|878857_879550_+\|aspartate/glutamate-racemase	gnl\|CDD\|182300	PRK10200, PRK10200, putative racemase; Provisional.	1.52281e-158
NZ_CP041247.1\|WP_141963584.1\|879536_880463_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|236819	PRK11013, PRK11013, DNA-binding transcriptional regulator LysR; Provisional.	0
NZ_CP041247.1\|WP_100686117.1\|892732_893263_+\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	1.75323e-106
NZ_CP041247.1\|WP_131048655.1\|883075_883555_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	3.52452e-11
NZ_CP041247.1\|WP_100686115.1\|895786_896662_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	1.38173e-114
NZ_CP041247.1\|WP_004115132.1\|877005_877896_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.62345e-77
NZ_CP041247.1\|WP_167686260.1\|881857_882856_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380494	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type 1 periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar binding of ABC-type transport systems.	8.70348e-128
NZ_CP041247.1\|WP_131048664.1\|897650_898118_+\|prepilin-peptidase-dependent-protein	gnl\|CDD\|236704	PRK10506, PRK10506, prepilin peptidase-dependent protein.	4.43878e-71
NZ_CP041247.1\|WP_141963582.1\|878396_878717_-\|cupin-domain-containing-protein	gnl\|CDD\|380366	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain. This family includes bacterial and archaeal pectin degradation protein KdgF that catalyzes the linearization of unsaturated uronates from both pectin and alginate, which are polysaccharides found in the cell walls of plants and brown algae, respectively, and represent an important source of carbon. These polysaccharides, mostly consisting of chains of uronates, can be metabolized by bacteria through a pathway of enzymatic steps to the key metabolite 2-keto-3-deoxygluconate (KDG). Pectin degradation is used by many plant-pathogenic bacteria during infection, and also, pectin and alginate can both represent abundant sources of carbohydrate for the production of biofuels. These proteins belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	1.80458e-52
NZ_CP041247.1\|WP_141963595.1\|887386_888580_+\|lysophospholipid-transporter-LplT	gnl\|CDD\|236879	PRK11195, PRK11195, lysophospholipid transporter LplT; Provisional.	0
NZ_CP041247.1\|WP_141963591.1\|883515_884532_-\|HTH-type-transcriptional-regulator-GalR	gnl\|CDD\|182681	PRK10727, PRK10727, HTH-type transcriptional regulator GalR.	0

>NZ_CP041247.1|WP_141963595.1|887386_888580_+|lysophospholipid-transporter-LplT
MSESVHTNTSLYSKGMMAVICAQFLSAFGDNALLFATLALMKQQFYPDWSQPVMQMLFVGAYILFAPFVGQFADSFAKGRVMMVANGMKLVGAGCICFGLNPFIGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMESSTIAAILLGSMAGGILADWHVLAALAICALVYGGAVIANLWIPKLPAARPGQSWRFTPMTYSFFSACKTLWRNGETRFSLTGTSLFWGAGVTLRFLLVLWVPAALGITSNAMPTYLNAMVAVGIVLGAGAAAKLVTLQTVSRCMPAGILIGVAVIFFALQQSLLPAFALLLLLGIFGGFFIVPLNALLQERGKHTVGAGNAIAVQNLGENVAMLLMLGLYSLAVSIGIPVVGVGIGFGAVFALAIAALWIWGRRQ
>NZ_CP041247.1|WP_141963593.1|885234_887394_+|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase
MLLAFFRLLFKGLYRVRLTGDTQPLQQQKVLITPNHVSFLDGILLALFLPVRPVFAVYSSISQRWFMRVLTPLIDFVPLDPTKPMSIKHLVRLIEQGRPVVIFPEGRISVSGSLMKIYDGAAFVAAKSQATIIPLRIEGAELTPFSRLKGLVKRRLFPRIRLHLLPPTRIEMPQAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYQSLLAAQDRFGARKHCVEDINFQPDTYRKLLTKTLFVARILEKYSTQGEKIGLMLPNAGISAAVIFGAIARGRIPAMMNYTAGVKGLSSAITAAEIKTVFTSRTFLDKGKLWHLPEQLTQVRWVFLEDLKGDITTGDKLWIFGHLLAPKLAQVKQQPEDAAMILFTSGSEGNPKGVVHSHKSLLANVEQIKTIADFTANDRFMSALPLFHSFGLTVGLLTPLFTGAEVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFLANYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKVGTVGRILPGMDARLLAMPGIAEGGRLQLKGPNIMNGYLRVENPGVLEAPAAENQHGEVESGWYDTGDIVTFDEQGYVRIQGRAKRFAKIAGEMVSLEMVEQVALAVSPDKMHATAIKQDAAKGEALVLFTTDNELNREKLLRYAREHGVPELAVPRDIRWLKQLPVLGSGKPDFVTLKGMVEQTEDSDE
>NZ_CP041247.1|WP_141963591.1|883515_884532_-|HTH-type-transcriptional-regulator-GalR
MATIKDVARLAGVSVATVSRVINNSPKASETSRQSVTAAMETLNYHPNANARALAQQSTETVGLVVGDVSDPFFGAMVKAVEQVAYNTGNFLLIGNGYHSIKKERQAIEQLIRHRCAALVVHAKMIPDDELVGLMKQIPGMVLINRILAGFEQRCVALDDRYGAWLATRHLIQQGHTRIGYLCSNHAISDAEDRLQGYYSALTESGLPCNDRLVTFAEPDESGGEQAITELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPREISLIGFDDVLISRYVRPRLTTVRYPIVTMATQAAELALALADQRPAPEITHLFSPTLVRRHSVMAPSESDKS
>NZ_CP041247.1|WP_131048655.1|883075_883555_+|GNAT-family-N-acetyltransferase
MHIQPLYAAPQHAEQVAMWLWQAFGGETLPLPFFATLIAHSQTPEALPLTFIAVEGETLAGTVGLWRCDLISRQDLFPWMAALYVAPHARGRGIAGKLQQHAIDYARRLGHPQLYLYSACRDFYERFGWQYIGEGLDYPATPVSLYRYDLSLSDGAITE
>NZ_CP041247.1|WP_167686260.1|881857_882856_-|substrate-binding-domain-containing-protein
MLDVSIRAGVSKATVSRVLNGTGQVKESTRQQVFKAMEELGYRPNFLARSLANRTSNSIGLVVSTFDGFYFGRLLQQASRQTEAWGKQLIVTDGHDAPEREEEAVQMLADRQCDAIILYTRHMSEKEIMSLIESIDTPLVVINRDVSLARERCVFFEQEDAAFQAVSYLITQGHRDIACITVPMHTPTGKARLQGYRKALKKHGIAWDPAKVKYGDSTMTRGYELCRELLAENTTFSALFSCNDDMALGASKALHQAGLQIPQDVSLFGFDDAPSAKWLEPGLSTVYLPIDNMITTAIDQAIKLANDQPIETIPPFTGTLVLRESVTTGPYF
>NZ_CP041247.1|WP_141963586.1|880598_881861_+|diaminopimelate-decarboxylase
MPRSLYATDTDLTAGNLLRLPGEFGCPVWVYDAQIIRRQIAQLSQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQQHPEDIVFTADLIDEATLERVKALQIPVNAGSVDMLSQLGEVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYSYLPAALEIMRRYQLQLVGIHMHIGSGVDYGHLEQVCGAMVRQVVEFGQDLQAISAGGGLSIPYREGEEAIDTDHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHITALAADGRNLSAAPLVDTVVAGPLCESGDVFTQQEGGKVETRLLPEVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGSARLIRRRQTIQELLALEQF
>NZ_CP041247.1|WP_141963584.1|879536_880463_-|LysR-family-transcriptional-regulator
MPAVNLRHIEIFHAVMTTGNLTEAARLLNTSQPTVSRELARFEKVIGLQLFERTRGRLQPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSVACLPVFSQSFLPLLLQPFLARYPEVSLQIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTPLLTLNEVCVLPRSHPLASKPVLTPADFHGENYISLSRTDSYRQLLDALFLEHQVKRRMVVETHSAASICAMVRAGVGLSVVNPLTALDYAESGVAVRRFSVDVPFTVSLIRPLHRPGSALVETFIQHLQGSLQRIQGPLDAVLKRA
>NZ_CP041247.1|WP_100686130.1|878857_879550_+|aspartate/glutamate-racemase
MKTIGLLGGMSWESTIPYYRLINEGIKTHLGGLHSASLLLHSVDFHEIEACQSAGDWDRAGEMLAQAAFGLQQAGAEGIVLCTNTMHKVAQAIETRCEVPFLHIADATGRAITAKGQKRVALLGTRYTMEQDFYRGRLQAQFAIETLIPQADDRERINRIIFDELCLGAFNDDSRDYYLQVIDALAAQGAEGVIFGCTEIGLLVPVESSPLPVFDTAAIHAADAVTFMLS
>NZ_CP041247.1|WP_141963582.1|878396_878717_-|cupin-domain-containing-protein
MFIFHNQTTLEDLGNGVTRRILAHGGNMMAVEVNFDAGAIGPMHNHPHEQLTYVLSGEFEFTIGEEKRVVRAGDTLYKKPHIMHGCLCLKAGILLDTFTPVREDFL
>NZ_CP041247.1|WP_004115132.1|877005_877896_-|sugar-ABC-transporter-permease
MNENKMLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDGLFWKSMGVTFAYVFLTIPLKLAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVLWRALFAIDGLLNSFIGVLGFDPVNWLGEPSLALMSVTLLRVWQFGSAMVIFLAALQNVPQSQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYSTYLFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFAAIAFKSSKYWVFYSADKGGKNG
>NZ_CP041247.1|WP_131048658.1|888958_889999_-|NADP(H)-dependent-aldo-keto-reductase
MQYHRIPHSSLEISTLGLGTMTFGEQNSEADAHQQLDYAVSQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKRGNREKLVIASKVSGPARNNDSSIRPNHALDRKNIRDALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYTWTDSAPVVTLLDTLEALTEFQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSYEVGLAEVSQYEGVELLAYSCLAFGTLTGKYLHGAKPAGARNTLFSRFTRYSSEQSQKAVAAYVDIARRHNLDPAQMALAFVRRQPFVASTLLGATTLEQLKTNVESLHLELSEEVLAEIEAVHQVYTYPAP
>NZ_CP041247.1|WP_131048659.1|890234_890453_-|YgdI/YgdR-family-lipoprotein
MKKWAVLISAVGLTFSVSGCSSDYVMATKDGRMILTDGKPAVDDDTGLISYEDQQGNKMQINRDDVSQIIKR
>NZ_CP041247.1|WP_100686121.1|890577_891291_-|TerC-family-protein
MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRIGLMGAMLMRLGLLASIAWVVKLTHPLFTVFDHAISFRDLILLLGGLFLIWKASKEIHESIEGEEEGLKTNVHSFMGAIVQIMVLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARPIGDFVDRHPSVKMLALSFLILVGFTLMLESFEIHIPKGYIYFAMFFSIAVESLNLLRNKKNPL
>NZ_CP041247.1|WP_141963597.1|891354_892050_-|DNA-mismatch-repair-endonuclease-MutH
MPAIAPLASPPHTQQQLLTQAQGLAGYSLGELAALAGIAIPRDLKRDKGWIGILLEIWLGASAGSKPEQDFAALGVELKTIPVDSQGRPLETTFVCVAPLTGNSGVTWESSHVRHKLKRVLWIPVEGDRAIPLAERRVGAPLLWSPNEEEDRQLRMDWEELMDLIVLGQVERITARHGEVLQLRPKAANSKALTEAIGARGEPILTLPRGFYLKKNFTAALLARHFLLDHD
>NZ_CP041247.1|WP_160703337.1|892066_892279_-|hypothetical-protein
MPLFPSYPIFLWITWCKILFIASDQFWKTRFHCFHNDKKMKKNPYESSNCHSYPEKGKLYPQCAELAFTF
>NZ_CP041247.1|WP_100686117.1|892732_893263_+|RNA-pyrophosphohydrolase
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLIGSDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASMTMSLAESAPKPQSAPAYRRKRG
>NZ_CP041247.1|WP_100686116.1|893275_895522_+|phosphoenolpyruvate--protein-phosphotransferase
MLTRLREIVEKVASAPRLNEALDILVTDICIAMETEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGLVGLVGRLAEPINLADAQKHPSFKYIPAVKEDRFRAFLGVPIIQRRQLLGVLVVQQRELRQFDESEESFLVTLATQMAAILSQSQLTALFGQYRQTRIRALPASSGVAIAEGWMDISLPLMEQVYEASTLDTASERERLTGALEEAASEFRRYSKRYAAGAQKETSAIFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALSDGYLKERAGDLRTLGQRLLFHLDDSIQGPNTWPARIVLVADELSATTLAEVPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSLLHGHMLVVDGYRGELLVDPEPALLQEYQRLVSEENELSRLAEDDLEHTSELKSGERVKVMLNAGLSLEHEEKLGNFIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNEKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVTSLDEVDEARRLIDRASREVEEMIGYAIPRPRLGVMLEVPSMVFMLPNLASRVDFISVGTNDLTQYILAVDRNNTRVASMYDSLHPAVLRALAMIAHDAERFGIDLRLCGEMAGDPMCVTILIGLGYRHLSMNGRSVARVKYLLRRIDIAEAQELSRRSLEAQMATEVRHQVAAFMERRGLGGLIRGGR
>NZ_CP041247.1|WP_100686115.1|895786_896662_+|prolipoprotein-diacylglyceryl-transferase
MNSGYLHFPDFDPVIFSVGPVSLHWYGLMYLVGFVFAMWLATRRANRPGSGWSKNEVENLLYAGFLGVFLGGRIGYVLFYNLPVFLQDPLYLFRVWDGGMSFHGGLIGVILVMIIFAKRTKRTFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPSFHYSMIFPGSRAEDLALLPSHPQWQSLFDTYGALPRHASQLYELALEGVVLFLILNLFIRKPRPTGSVSGLFLIGYGLFRIIVEFFRQPDQQFTGEWVQYISMGQILSIPMVLAGIIMMVWAYRRRPQQQTS
>NZ_CP041247.1|WP_141963599.1|896668_897463_+|thymidylate-synthase
MKQYLDLMQKVLAEGTQKNDRTGTGTISIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRSWPAPDGRHIDQISTVMEQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMVAQQCDLEVGDFVWTGGDTHLYSNHLAQTDLQLSREPRPLPKLVIKRKPASIFDYRFEDFDIEGYDPHPGIKAPVAI
>NZ_CP041247.1|WP_131048664.1|897650_898118_+|prepilin-peptidase-dependent-protein
MNRQRGYTLIETLIALALIFILSAGGVYSWQSWQQQQRLWQTANQVRDYLVLLRDDANWHNRNRLVKVGQRGGGWCLSAEETLAECATATPFTLHPRWPEVALSHITPGLGFYGLRNSAWAGHIRLQSAGGSWNIIVSDWGRIRLCRNEETASCL

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Crispr_ID: NZ_CP041247_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041247_3

2299038-2300567

TypeI

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRT

25 spacers

csa3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP041247_3

>merge|NZ_CP041247|3|2299038-2300567|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGTACAGGCAGCTTAGAAATGCTGATATCGCATTATCAATTTTGTCTTCGAGTTCACTGCCGTACAGGCAGCTTAGAAATATAACCCGGTGGTGGCAGAGCTGGATTTTATGTTCACTGCCGTACAGGCAGCTTAGAAACTGAGACAGATCAAACATACAGCCGGTGAGATAGTTCACTGCCGTACAGGCAGCTTAGAAATTTACCCACCCCAGTAAAGCCGGGAATAGCTGGTTCACTGCCGTACAGGCAGCTTAGAAACGTCAGCTGCGGCAATCAGCGTGCCGCCGTCGGTTCACTGCCGTACAGGCAGCTTAGAAAGTACGGGCGGGTCGCCCAGAACTCGGCTGCAGGTTCACTGCCGTACAGGCAGCTTAGAAAACCAGTCTGGATAACGAACACGACCACAACGGTGTTCACTGCCGTACAGGCAGCTTAGAAAGGCTGACCCGGATCAAGCAGGTCGAGCACATCGTTCACTGCCGTACAGGCAGCTTAGAAAAGTACCGGGGAACGCGCCTTCTGGATGGTTTTGTTCACTGCCGTACAGGCAGCTTAGAAAAGAAGAGAACGATCTAACAGATAGATCACTGGTTCACTGCCGTACAGGCAGCTTAGAAAACCAAGGGATAATCAATTCAATATCCCCTATAGTTCACTGCCGTACAGGCAGCTTAGAAAGGAATGACACTGATTCAGCGTCAAACGCTTCCGTTCACTGCCGTACAGGCAGCTTAGAAAACTTGCGATGGCGGGAATCTCCGCGACGGTAAGTTCACTGCCGTACAGGCAGCTTAGAAAGCCGTGAGGTTGTTGAGGCATGGGTTGATGAAGTTCACTGCCGTACAGGCAGCTTAGAAAAGAACACCAGCTGATTCAGGATGGCCGCCAGCGTTCACTGCCGTACAGGCAGCTTAGAAAATCTGTAGCAATAACAATGCGTCCAATGTACTGTTCACTGCCGTACAGGCAGCTTAGAAAAAAACGCATCATTGAATGCGTCTAATTAACTAGTTCACTGCCGTACAGGCAGCTTAGAAATTTACCTGCCGCGCTGAAAGGCTGGCACGGGCGTTCACTGCCGTACAGGCAGCTTAGAAAGCTGGCGCATCGATGCTCGAGCTGAACAACCGGTTCACTGCCGTACAGGCAGCTTAGAAAGATGAAGTTTTCCCCGTCAACAAAGAGGGTAAAGTTCACTGCCGTACAGGCAGCTTAGAAATCTCGCGCCAGGCCATCAGCTCGCGCAGCTCCGTTCACTGCCGTACAGGCAGCTTAGAAAATACCGTGGCGGTTGAACGCGTGCAGGAAGTCGTTCACTGCCGTACAGGCAGCTTAGAAAAGTAGATTGCATGGCAGTGGCAATGCAGGCGGGTGCACTGCCGTACAAGCAGCTTAGAAAATGACATTCGTCGCGAAAATCTCAAAGACCTGGTGCACTGCCGTACAAGCAGCTTAGAAAATGACATTCGTCGCGAAAATCTCAAAGACCTGGTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP041247|3|1|2299038-2300567|PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCTGATATCGCATTATCAATTTTGTCTTCGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TATAACCCGGTGGTGGCAGAGCTGGATTTTAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTGAGACAGATCAAACATACAGCCGGTGAGATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTACCCACCCCAGTAAAGCCGGGAATAGCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGTCAGCTGCGGCAATCAGCGTGCCGCCGTCG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTACGGGCGGGTCGCCCAGAACTCGGCTGCAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCAGTCTGGATAACGAACACGACCACAACGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGCTGACCCGGATCAAGCAGGTCGAGCACATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTACCGGGGAACGCGCCTTCTGGATGGTTTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAAGAGAACGATCTAACAGATAGATCACTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCAAGGGATAATCAATTCAATATCCCCTATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAATGACACTGATTCAGCGTCAAACGCTTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACTTGCGATGGCGGGAATCTCCGCGACGGTAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCCGTGAGGTTGTTGAGGCATGGGTTGATGAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAACACCAGCTGATTCAGGATGGCCGCCAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCTGTAGCAATAACAATGCGTCCAATGTACT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAAACGCATCATTGAATGCGTCTAATTAACTA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTACCTGCCGCGCTGAAAGGCTGGCACGGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCTGGCGCATCGATGCTCGAGCTGAACAACCG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATGAAGTTTTCCCCGTCAACAAAGAGGGTAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTCGCGCCAGGCCATCAGCTCGCGCAGCTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATACCGTGGCGGTTGAACGCGTGCAGGAAGTC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTAGATTGCATGGCAGTGGCAATGCAGGCGG
GTGCACTGCCGTACAAGCAGCTTAGAAA	ATGACATTCGTCGCGAAAATCTCAAAGACCTG
GTGCACTGCCGTACAAGCAGCTTAGAAA	ATGACATTCGTCGCGAAAATCTCAAAGACCTG
GTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP041247|3|3|2299038-2300567|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCTGATATCGCATTATCAATTTTGTCTTCGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TATAACCCGGTGGTGGCAGAGCTGGATTTTAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTGAGACAGATCAAACATACAGCCGGTGAGATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTACCCACCCCAGTAAAGCCGGGAATAGCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGTCAGCTGCGGCAATCAGCGTGCCGCCGTCG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTACGGGCGGGTCGCCCAGAACTCGGCTGCAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCAGTCTGGATAACGAACACGACCACAACGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGCTGACCCGGATCAAGCAGGTCGAGCACATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTACCGGGGAACGCGCCTTCTGGATGGTTTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAAGAGAACGATCTAACAGATAGATCACTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCAAGGGATAATCAATTCAATATCCCCTATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAATGACACTGATTCAGCGTCAAACGCTTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACTTGCGATGGCGGGAATCTCCGCGACGGTAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCCGTGAGGTTGTTGAGGCATGGGTTGATGAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAACACCAGCTGATTCAGGATGGCCGCCAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCTGTAGCAATAACAATGCGTCCAATGTACT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAAACGCATCATTGAATGCGTCTAATTAACTA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTACCTGCCGCGCTGAAAGGCTGGCACGGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCTGGCGCATCGATGCTCGAGCTGAACAACCG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATGAAGTTTTCCCCGTCAACAAAGAGGGTAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTCGCGCCAGGCCATCAGCTCGCGCAGCTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATACCGTGGCGGTTGAACGCGTGCAGGAAGTC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTAGATTGCATGGCAGTGGCAATGCAGGCGG
GTGCACTGCCGTACAAGCAGCTTAGAAA	ATGACATTCGTCGCGAAAATCTCAAAGACCTG
GTGCACTGCCGTACAAGCAGCTTAGAAA	ATGACATTCGTCGCGAAAATCTCAAAGACCTG
GTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP041247|3|1|2299038-2300567|CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGCTGATATCGCATTATCAATTTTGTCTTCGA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TATAACCCGGTGGTGGCAGAGCTGGATTTTAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	CTGAGACAGATCAAACATACAGCCGGTGAGATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTACCCACCCCAGTAAAGCCGGGAATAGCTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	CGTCAGCTGCGGCAATCAGCGTGCCGCCGTCG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GTACGGGCGGGTCGCCCAGAACTCGGCTGCAG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCAGTCTGGATAACGAACACGACCACAACGGT
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGCTGACCCGGATCAAGCAGGTCGAGCACATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTACCGGGGAACGCGCCTTCTGGATGGTTTT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAAGAGAACGATCTAACAGATAGATCACTG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACCAAGGGATAATCAATTCAATATCCCCTATA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAATGACACTGATTCAGCGTCAAACGCTTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ACTTGCGATGGCGGGAATCTCCGCGACGGTAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCCGTGAGGTTGTTGAGGCATGGGTTGATGAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGAACACCAGCTGATTCAGGATGGCCGCCAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCTGTAGCAATAACAATGCGTCCAATGTACT
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAAACGCATCATTGAATGCGTCTAATTAACTA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTACCTGCCGCGCTGAAAGGCTGGCACGGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	GCTGGCGCATCGATGCTCGAGCTGAACAACCG
GTTCACTGCCGTACAGGCAGCTTAGAAA	GATGAAGTTTTCCCCGTCAACAAAGAGGGTAAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TCTCGCGCCAGGCCATCAGCTCGCGCAGCTCC
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATACCGTGGCGGTTGAACGCGTGCAGGAAGTC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AGTAGATTGCATGGCAGTGGCAATGCAGGCGG
GTGCACTGCCGTACAAGCAGCTTAGAAA	ATGACATTCGTCGCGAAAATCTCAAAGACCTG
GTGCACTGCCGTACAAGCAGCTTAGAAA	ATGACATTCGTCGCGAAAATCTCAAAGACCTG
GTGCACTGCCGTACAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041247.1\|WP_141964153.1\|2300652_2301327_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP041247.1\|WP_141964469.1\|2309095_2310406_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP041247.1\|WP_141964471.1\|2312356_2312911_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP041247.1\|WP_141964155.1\|2301690_2303247_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP041247.1\|WP_141964154.1\|2301323_2301671_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP041247.1\|WP_141964462.1\|2290126_2291350_-\|SfnB-family-sulfur-acquisition-oxidoreductase	unknown	unknown	gnl\|CDD\|274924
NZ_CP041247.1\|WP_131047972.1\|2295693_2296329_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
NZ_CP041247.1\|WP_141964467.1\|2304758_2305742_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP041247.1\|WP_141964470.1\|2310402_2311338_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|187867
NZ_CP041247.1\|WP_131047979.1\|2311348_2312347_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP041247.1\|WP_141964465.1\|2294251_2294635_-\|glyoxalase/bleomycin-resistance/extradiol-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|319905
NZ_CP041247.1\|WP_142255873.1\|2288631_2289408_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270315
NZ_CP041247.1\|WP_131047966.1\|2289450_2290125_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP041247.1\|WP_141964464.1\|2292215_2293508_+\|arsenical-efflux-pump-membrane-protein-ArsB	unknown	unknown	gnl\|CDD\|185342
NZ_CP041247.1\|WP_165785358.1\|2303612_2304182_-\|DJ-1/PfpI/YhbO-family-deglycase/protease	unknown	unknown	gnl\|CDD\|153243
NZ_CP041247.1\|WP_141964466.1\|2296408_2298019_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP041247.1\|WP_141964463.1\|2291849_2292170_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|236654
NZ_CP041247.1\|WP_131047970.1\|2293517_2293943_+\|glutaredoxin-dependent-arsenate-reductase	unknown	unknown	gnl\|CDD\|182200
NZ_CP041247.1\|WP_141964468.1\|2305738_2308966_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP041247.1\|WP_131047971.1\|2294725_2295496_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268

Protein	Function_ID	Function_description	E-value
NZ_CP041247.1\|WP_141964153.1\|2300652_2301327_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.19638e-17
NZ_CP041247.1\|WP_141964469.1\|2309095_2310406_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	3.74326e-160
NZ_CP041247.1\|WP_141964471.1\|2312356_2312911_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.95901e-93
NZ_CP041247.1\|WP_141964155.1\|2301690_2303247_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.43499e-122
NZ_CP041247.1\|WP_141964154.1\|2301323_2301671_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	8.89676e-55
NZ_CP041247.1\|WP_141964462.1\|2290126_2291350_-\|SfnB-family-sulfur-acquisition-oxidoreductase	gnl\|CDD\|274924	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family. Members of this protein family belong to the greater family of acyl-CoA dehydrogenases. This family includes the sulfate starvation induced protein SfnB of Pseudomonas putida strain DS1, which is both encoded nearby to and phylogenetically closely correlated with the dimethyl sulphone monooxygenase SfnG. This family shows considerable sequence similarity to the Rhodococcus dibenzothiophene desulfurization enzyme DszC, although that enzyme falls outside of the scope of this family. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_CP041247.1\|WP_131047972.1\|2295693_2296329_+\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.33893e-88
NZ_CP041247.1\|WP_141964467.1\|2304758_2305742_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP041247.1\|WP_141964470.1\|2310402_2311338_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	2.08262e-127
NZ_CP041247.1\|WP_131047979.1\|2311348_2312347_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP041247.1\|WP_141964465.1\|2294251_2294635_-\|glyoxalase/bleomycin-resistance/extradiol-dioxygenase-family-protein	gnl\|CDD\|319905	cd07241, VOC_BsYyaH, vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YyaH. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	8.18568e-51
NZ_CP041247.1\|WP_142255873.1\|2288631_2289408_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270315	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold. This group includes the lipoprotein Tp32, a periplasmic component of a methionine uptake transporter system, and its closely related homologs. The Tp32 has both structural and sequential homology to the MetQ family of substrate-binding protein, and thus it belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	4.12218e-108
NZ_CP041247.1\|WP_131047966.1\|2289450_2290125_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	2.04126e-92
NZ_CP041247.1\|WP_141964464.1\|2292215_2293508_+\|arsenical-efflux-pump-membrane-protein-ArsB	gnl\|CDD\|185342	PRK15445, PRK15445, arsenical efflux pump membrane protein ArsB.	0
NZ_CP041247.1\|WP_165785358.1\|2303612_2304182_-\|DJ-1/PfpI/YhbO-family-deglycase/protease	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.92116e-108
NZ_CP041247.1\|WP_141964466.1\|2296408_2298019_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP041247.1\|WP_141964463.1\|2291849_2292170_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|236654	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional.	3.82469e-59
NZ_CP041247.1\|WP_131047970.1\|2293517_2293943_+\|glutaredoxin-dependent-arsenate-reductase	gnl\|CDD\|182200	PRK10026, PRK10026, arsenate reductase (glutaredoxin).	3.40136e-81
NZ_CP041247.1\|WP_141964468.1\|2305738_2308966_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP041247.1\|WP_131047971.1\|2294725_2295496_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.41025e-78

>NZ_CP041247.1|WP_141964466.1|2296408_2298019_-|FAD-NAD(P)-binding-protein
MKKIAIIGAGPTGIYTLFSLLKHQQPLAVTVYEQARQAGVGMPYSDEENSRMMLANIASIEIPPILCRYIDWLKQQSEEHLARYGVSHDSLHVRQFLPRVLLGEYFRDQFIGLTARARQQGFPLTVHESCEVTDLQATAEGVRLWAQGGPVAERFDLAVIATGHVWPAEEESTRTFFPSPWSGLMDAQIPACRVGIMGTSLSGIDAAMAVVMQHGEFVESAERPLQFRLNPASEALNIVLMSRAGILPEADFYCPIPYEPLAVVTPDALDKAIAAGAKGLLDRVFRLMAQEIARADPQWSARIALPTLDADSFSDAWFAERRKHDPFHWAQANLMEVERNKREKYTVAWRYSLLRLHEAVQEIVPHLDARDSQRFRAGLARVFIDNYAAIPSESIRRLLALREAGVIRIVALGEAYQMTIEEDKTRITTRETGDTYDVFIDARGQKALKTNDLPFPTLREQIQATGDDIPDVGDDYTLQEPAEVRGRVAFAALPWLMHDQPFVQGITACAGMAEAIAGAISRPASRRRRRLPLTEL
>NZ_CP041247.1|WP_131047972.1|2295693_2296329_+|carbonic-anhydrase
MQHIIEGFLNFQKEIFPQRKELFRSLASSQNPKALFISCSDSRLVPELVTQQEPGQLFVIRNAGNIVPSFGPEPGGVSATIEYAVVALGVTDIVICGHSNCGAMSAVATCQCLDPMPAVAHWLRYADAAKAVVEKGTWNSEIDKVNAMVRENVIAQLNNIKTHPSVAVGLRDKALRLHGWVYDIESGAIGALDKHTKTFVSLSENPAVYFE
>NZ_CP041247.1|WP_131047971.1|2294725_2295496_+|DeoR/GlpR-transcriptional-regulator
MLDYAAFPQQRQALICQILQENGRVVCSELASRLNVSEHTIRRDLHELSKDGFCKKVYGGAVMNLPEAGDYSERKDKNAATKLRIAQKCARLVKPGGCIFIDTGTTNLAMAEALPAELALTVVTNSPEIAAELLKKPLYDVVMLGGQVQRASGGCVGTSAVAQLQGVLFDQGFIGGCAMAPESGLTGFDYADCEFKKAVIKQCSEIIVGLTSDKIPAVARFVVAQSSDIDVLVVEENISREYRDTFREHDIRIYTV
>NZ_CP041247.1|WP_141964465.1|2294251_2294635_-|glyoxalase/bleomycin-resistance/extradiol-dioxygenase-family-protein
MKIAHIALWTRQLEQQARFWSGFFSGQINEKYCSRTNPGFESYFVKIGEDIAIELMSKPGLQTIAPDNNHTGWAHLAISVGGEQQVDALAKRAETQGILVSPPRTTGDGYYEAVIKDPDGNLIEIVA
>NZ_CP041247.1|WP_131047970.1|2293517_2293943_+|glutaredoxin-dependent-arsenate-reductase
MSNTIIYHNPDCGTSRNTLAMIRNSGIEPTIIYYLDTPPSREELVALIAAMGITVRALLRKNVEPYAQLGLDDDTLSDEQLIACMLQQPILINRPIVVTPLGTRLCRPSEVVLEILTQPQKQPFRKEDGEWVVAPSDQRQP
>NZ_CP041247.1|WP_141964464.1|2292215_2293508_+|arsenical-efflux-pump-membrane-protein-ArsB
MLLAGTIFLFTLLLVIWQPKGLGIGWSASLGAVLALASGVIQLSDIPLVWNIVWNATAAFIAVIVISLLLDESGFFSWAALHVARWGNGRGRMLFSWIIVLGAVVAALFANDGAALILTPIVIAMLSALGFSPRATLAFVMAAGFIADSASLPLVVSNLVNIVSADFFHLGFSTYAAVMVPVDIAAILATLAMLHLVFRRDIPPVYDLALLPEPASAIKDRPTFLTGWVVLVALLAGFFVLEPRGIPVSAIAATGAAVLLAVAKTGRVINTGNVLRGAPWQIVVFSLGMYLVVYGLRNAGLTAALSAVLNVLAENGLWVATFGTGVLTAFLSSLMNNMPTVLVGALSIDGSTATGVIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNRAISWGYYFRTGIVMTLPVLLVTLAALAWRLSFSLS
>NZ_CP041247.1|WP_141964463.1|2291849_2292170_+|metalloregulator-ArsR/SmtB-family-transcription-factor
MPHPLEVFKVLSDATRLTVVMLLRERGELCVCDICALTAESQPKISRHMAILRQSGLVIDRREGKWVHYRLSPHMPAWAAEIVDSAWRCLRDEVRARLADAAPSSC
>NZ_CP041247.1|WP_141964462.1|2290126_2291350_-|SfnB-family-sulfur-acquisition-oxidoreductase
MSERQTPVSYTRHSPDAHVIRSDEEAIAIAHEIALLLQPGAAERDRSGTVAPEIIDTFSNSGLWGITVPRQWGGAEVSAATLAQVIAIISAADPSLGQIPQNHYCLLEDIRLQGSPEQQAFFFGLVLQGHRFANALSETGGKTVLDIRTRLESRGDGLYINGRKGYCTGSLYAHWLGILALDADDRAQLAFVPRDSAGLTVLDDWDCLGQRNTASGTVLAENLAVAPFHLFPTWESYAVPTLAGPFAQLTTAAIDAGIARAALNDTVAFVRQFARPWIDAGVERASDDPLTIYHIGQIDSRLAAAEALLEQAGKVLDRFKHDLSEEHVAQASIAVARAKVFTTEVALDAASRLFELSGTRATSNRYHFDRHWRNARVHTLHDPVRWKYQLLGNWVLNGVRPQRHDWN
>NZ_CP041247.1|WP_131047966.1|2289450_2290125_-|ABC-transporter-permease
MAPVLEFFADIDWNDVTQAGIDTLIMLGCSLGFTVLFGLPLGIVLYLTGQPRLLHAPRLYRLLSFCVNVLRSLPFIILLIVMIPVTTLITGTSLGVEGTIPPLVAGCAPFFARLVESALREVDHGLVEASWSMGGNTAQLIWHTLLPESRAGLLAAVTVTAILLVDYTSMAGVIGGGGLGDLAIRFGYQRFQTDVMVVTVLLLIALVQVLQMSGDRLVRYVSRK
>NZ_CP041247.1|WP_142255873.1|2288631_2289408_-|ABC-transporter-substrate-binding-protein
MHKTLIAAGLLTLFSASAAASETLTVGATPVPHAEILEFVKPELARQGVDLKIKVFNDFIQPNQQLAEKNLDANYYQYRPFLDNYNQTRHTHLVPVVGVHIEPFGAYSSKYHDIKALPDGATIAIPNDPVNTGRALVMLSDAGLITLKNPKDPQSATKDIVANPHHFKIRELEGAMLARAVNQVDLAFIFANYALEAGIDTDKALLVEKGSDLYVEYLVARPDNLNDPGIQKLAKALHSDAVRNFILTRYKGKIVPGF
>NZ_CP041247.1|WP_141964153.1|2300652_2301327_+|transposase
MNSQTTKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQRFIASGIAWPLPDSVSFAQLDAILYANRKNESTRPEISEEKWRKERRASYSREFKVSLAKQALQPGAVVARIAREHDINDNLLFKWKSQYEDGLLSDDDIQECMPVPVALTDTPEPIRPVTNPFWRNKPDECPECDPENVPRCELHLKSGVVKLFDPLTPELLRALIREMKGGAR
>NZ_CP041247.1|WP_141964154.1|2301323_2301671_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MITLPTGTRIWIIAGVTDMRCGFNGLASKVQNTLKDDPFSGHIFVFRGRSGKMVKILWADRDGLCLFAKRLEQGRFVWPVTRDGKVHLTPAQLSMLLEGIAWQHPKRTERPGIRI
>NZ_CP041247.1|WP_141964155.1|2301690_2303247_+|IS66-family-transposase
MNNTLPDDIEQLKALLIAQQAVIVRLSGEITGYAREIDSLRALVAKLQRMLFGRSSEKNREKIEKKIAQAEKRITELQNRLGEAQSQLTSMAGDTGSKTSDTPARKALPVTLPRDRRVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPKLACSRCDCIVQAPLPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELSRNTMGRWVDIMGEQLRPLYDELNHYVLMPGKVHADDTPVSVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYSGILQADAYAGYNALYESGRVTEAACMAHARRKLHDVHVRHPTAVTAEALNRIGALYAIESEIRGSPAEERLTARKARSVPLMQSLYDWIQQQMGTLSRHSDTAKAFAYLLKQWDALNEYCRNGWVEIDNNLCENALRVVALGRRNYMFFGSDSGGDSAAVMYSLLGSCKLNGIEPEAWLHHVISVINTWPANRVKDLLPWNVTLSVN
>NZ_CP041247.1|WP_165785358.1|2303612_2304182_-|DJ-1/PfpI/YhbO-family-deglycase/protease
MMSKKILMLVGDYAEDYETMVPFQALQMIGHQVDAVCPDKSKGDYIMTAIHDFDGAQTYSEKPGHRFVLNADFAAVKEQDYDALLIPGGRAPEYLRLNDEVLKLVQAFDAAHKPIAAVCHGPQLLAAAGILKGRTCSAYPACAPEVRLSGGHYAEIGIDQAHVDGNLVTAPAWPAHPQWLAKFAEVLQQ
>NZ_CP041247.1|WP_141964467.1|2304758_2305742_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MPENTITPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYVTQEGKESFYWNIPIANTTAVMLGMGTSVTQMAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLCPQSEYRPTGYLQNWVSFWFDEAKRLQAAKTFQFIRLQQIEKQWSGLRMQRETSFQSDMDVLQAILERARQGMESANDHTSLMLQEAQLTKSLYKLASQTVGYGNFTRAKRGGGVDTANRFLDQGNYLAYGLAAVAAWVTGIPHGLAVMHGKTRRGGLVFDIADLIKDALVLPQAFIAAMEGEDNQMFRQRCINVFQQADALDVMIATLQETSLSLAKVAP
>NZ_CP041247.1|WP_141964468.1|2305738_2308966_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILIISRCTKKAREESCRIIDQFAERTGDAAWQTAITLDGVNTLRKLLRKTARRNTAVACHWLKKNGQTELLWIVGNIRRFNAQGRAPTNRTTLDVLKNGAEHRWNSAESIALLAAIAGLFHDFGKAGMCFQQTLRGESQHVCQPYRHEWISVRLFQAFVGERTDEQWLGRLGQLNASDEKEMLKAVKMDSPTWTCSPLSTLPPLAKVVGWLMLSHHRLPQSLSAQPQLMYCEGWIERQLNADWNSLNHTSSGKHQWKDRDFKNVWKFPHGTPLKSKTWREKARQIGKRIRNLPGLLHYGSLDNLFTLHLARLSLMLADHVYSSQPAYAGWQDEAIQTWANSDRQTRQLKQKLDEHNIGVAHHALLLGRSLPTLRRTLPAIARHKTFRERAKDARFLWQNKAWDVALSLRDKSVEQGFFGINMASTGCGKTFANARIMYALSDEQEGCRFSVALGLRTLTLQTGQALQSRLGLDDDTLAVVTGSAAVRELYQGNDGEDTNSASDEAFFACHHYVHYEGATGSGIARQWLAQEPALNRLVSAPVLVTTIDHLMPATEGVRGGRQIPAMLRLLTSDLVLDEPDDFDIDDLHALCRLVNWAGMLGSRVLLSSATLPPALTEALFEAYREGRKAWQAACGVSGRPVNICCAWFDEYGAQSHDVADEALFRQAHGKFVTQRVKRLPEKPCLRLGKLAIVALHSAGNSGIVSAVANTLHQQMRILHQHHNTHKNGKTVSFGLVRLANINPLVAIAQTLMEIPSPENYRIHYCVYHSQHPLAVRALIEKRLDGAFTRHDPQAIWQLPEVQQALAMPEQNHLFVVLGTSVLEVGRDFDADWGIAEPSSMRSLIQFAGRIQRHRQHVPVRENLVILERNVRALQGKTVAYCRPGFETEKHLLPYHDMHDLLSEESCRTIDAVPRIAESIPGNRLAALEHTRLRAALLDGGDKQEAIAASWWRLPLTWSGELQRRTPFRRSSPQASFFLSMEEDDDEPEFCLMQENGGLKPAGRFRWQALTLADGVQPWFGVDYAQVLLALAESKQMELAAVSRRFGEITLRVAKEEETEEWLYHPVLGVFRAL
>NZ_CP041247.1|WP_141964469.1|2309095_2310406_+|type-I-F-CRISPR-associated-protein-Csy1
MDEGALIAALRNYIAGRRQAKLEAFDKAAAKRSDADSATLAAERRELELRYEPKAWLTDAAKRAGQINLVTHAAKFTHGDSKSSSIFSEAVAQEGYLSSATMSGLEPDAVGNAAALDVAKLLQMRIENGDSLLASLKRDDRSPLAAFTDDAAELAEWVSGFSRAFTPGEPASHKLAKQGYFPVGDDYRLLSPLFATSLAHAVHQRMIALRFGDDVKAIWKARREKTWHPTPLTLFPDAAEMHFGGTKPQNISYLNSVRGGRTWLLSCQPPQWKRAEKKPTNLRSVFTFGGQFDRRANGKLQLLVSLLTRTGDYTSFRIREARDEYIDALIDLLFDVVSDLQRETWQNWTLDCPELKAHQQLWLDPWRTKTDEAFRLERDKDDWQAKVAEDFALWLNARLRKALPDVGAVEKHEWETRERLRTNLREMEKIIQEALK
>NZ_CP041247.1|WP_141964470.1|2310402_2311338_+|type-I-F-CRISPR-associated-protein-Csy2
MSSLILLRRIKVENANAVAGLTYGFPAITHFLGFAHALSRRLTQTHGLRIDGCAVVSHEHQIHAHISGRDYQFALTRNPLTREAKTASFNEEGRMHLTVSLLLECHGEIPNGEYGQRELADYLAQVCPTFRLAGGIIVSIEGISVMPMPATGREMYRLQWQLMPGFALRDRSSWLCEHHQMLLENDPAATLLDAWLDFAALKIQAETPEDKGIQEGDPAEWRHVPKPKPGFLVPLMTGYQRISELYAPGVVVNARDAQTPFAFTEAVYAIGEWCGLHRIQSLDDIFWRYHTTETGYYCQGAGAPLAPEHLK
>NZ_CP041247.1|WP_131047979.1|2311348_2312347_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAPTAVKTASVLAFERKLATSDAVMYSGRWQGNEWQPVRVQEKAVRGTISNRLKNALTSDPAKLDAEIQKANLQRVDVAALSAEADTLLVKFSLRVLGNLSTPSVCNDRDYQDALRQVIDGYIRENGFAELARRYATNLANGRFLWRNRVGAEKIVVKVTGSKEWTFDAHEYGLRDFSASDKSLDELAREIEKGLSGEGFVLLNVEAQVFLGAGQEVFPSQELVLDSNSSKSRLLYQVDDIAGMHSQKIGNALRTIDTWHPEADELGAIAVEPYGSVTSRGVACRQPREKMDFYTLLDNWVTKGQTPDKKQQHYVMAVLIRGGVFGEKSE
>NZ_CP041247.1|WP_141964471.1|2312356_2312911_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEIRVLPDPEFSEEMLMAALVARLHRALGRRGKGDIGVSFPSHHIKPGAVLRLHGQHRALNELESTGWRKGLNDYCLCSQVQPVPEAASWRCVSRVQVKSSPERLLRRSVRKGWLTEEEAQKLMATMEEERTDLPWLNLRSLSSGQSFRLFIRHGDLLPAPVAGLFSTYGLSATATVPWF

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Crispr_ID: NZ_CP041247_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041247_4

2314085-2315012

TypeI-F

I-F

Consensus_repeat	Method
GTGCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
GTGCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTGCACTGCCGTACAGGCAGCTTAGAAA	CRT

15 spacers

cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1

The CRISPR arrays of NZ_CP041247_4

>merge|NZ_CP041247|4|2314085-2315012|PILER-CR,CRISPRCasFinder,CRT
GTGCACTGCCGTACAGGCAGCTTAGAAACGCAAATAACACGATCTCTGAACAGGTCAAGAGTGCACTGCCGTACAGGCAGCTTAGAAAGGGTAGCGCCGCTTAATTAATGCATCATTGATGTGCACTGCCGTACAGGCAGCTTAGAAATGGCGGGCATGGTCAGCGCTGCAGATATCGTTGTGCACTGCCGTACAGGCAGCTTAGAAAATCAGAGAGGCGGCATTGTTTGACGAGGACGGGTGCACTGCCGTACAGGCAGCTTAGAAAACCCGTGACGCGGCCAGCGGTCAGGCGTTCCTGTGCACTGCCGTACAGGCAGCTTAGAAAAGTTTAAACCGGGACAGTGAAACAAACGTCATGTGCACTGCCGTACAGGCAGCTTAGAAAAGCACATCGCTTTGCCTGGCAAGGCACAGATAGTGCACTGCCGTACAGGCAGCTTAGAAAACATAGAGCAGGCGCGATTGGCGTAGCGAATTGTGCACTGCCGTACAGGCAGCTTAGAAAAGTAACTTTGACCACGGTATAAAGCCCACCAGGTGCACTGCCGTACAGGCAGCTTAGAAATGGTTGATGCTCGCAACAAGGTTGAAGCCGCGGTGCACTGCCGTACAGGCAGCTTAGAAAAGTAATTCGTCCGATGCCTCGATGATGGCGATGTGCACTGCCGTACAGGCAGCTTAGAAATCAAGCCGGAATGTTCCTGGCTCGTCGCCGACGTGCACTGCCGTACAGGCAGCTTAGAAAGACACCGAATCGTCTGTAAATGTCGGGATGAAGTGCACTGCCGTACAGGCAGCTTAGAAACAGATCCGCAGCGTTCCGCCATGGTTTTCCACGTGCACTGCCGTACAGGCAGCTTAGAAAAGAGAGCAGCTTCACGAACGCGCCCGCGAAAAGTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP041247|4|2|2314085-2315012|PILER-CR
GTGCACTGCCGTACAGGCAGCTTAGAAA	CGCAAATAACACGATCTCTGAACAGGTCAAGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GGGTAGCGCCGCTTAATTAATGCATCATTGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGCGGGCATGGTCAGCGCTGCAGATATCGTT
GTGCACTGCCGTACAGGCAGCTTAGAAA	ATCAGAGAGGCGGCATTGTTTGACGAGGACGG
GTGCACTGCCGTACAGGCAGCTTAGAAA	ACCCGTGACGCGGCCAGCGGTCAGGCGTTCCT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTTTAAACCGGGACAGTGAAACAAACGTCAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGCACATCGCTTTGCCTGGCAAGGCACAGATA
GTGCACTGCCGTACAGGCAGCTTAGAAA	ACATAGAGCAGGCGCGATTGGCGTAGCGAATT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTAACTTTGACCACGGTATAAAGCCCACCAG
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGTTGATGCTCGCAACAAGGTTGAAGCCGCG
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTAATTCGTCCGATGCCTCGATGATGGCGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCAAGCCGGAATGTTCCTGGCTCGTCGCCGAC
GTGCACTGCCGTACAGGCAGCTTAGAAA	GACACCGAATCGTCTGTAAATGTCGGGATGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	CAGATCCGCAGCGTTCCGCCATGGTTTTCCAC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGAGAGCAGCTTCACGAACGCGCCCGCGAAAA
GTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP041247|4|4|2314085-2315012|CRISPRCasFinder
GTGCACTGCCGTACAGGCAGCTTAGAAA	CGCAAATAACACGATCTCTGAACAGGTCAAGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GGGTAGCGCCGCTTAATTAATGCATCATTGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGCGGGCATGGTCAGCGCTGCAGATATCGTT
GTGCACTGCCGTACAGGCAGCTTAGAAA	ATCAGAGAGGCGGCATTGTTTGACGAGGACGG
GTGCACTGCCGTACAGGCAGCTTAGAAA	ACCCGTGACGCGGCCAGCGGTCAGGCGTTCCT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTTTAAACCGGGACAGTGAAACAAACGTCAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGCACATCGCTTTGCCTGGCAAGGCACAGATA
GTGCACTGCCGTACAGGCAGCTTAGAAA	ACATAGAGCAGGCGCGATTGGCGTAGCGAATT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTAACTTTGACCACGGTATAAAGCCCACCAG
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGTTGATGCTCGCAACAAGGTTGAAGCCGCG
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTAATTCGTCCGATGCCTCGATGATGGCGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCAAGCCGGAATGTTCCTGGCTCGTCGCCGAC
GTGCACTGCCGTACAGGCAGCTTAGAAA	GACACCGAATCGTCTGTAAATGTCGGGATGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	CAGATCCGCAGCGTTCCGCCATGGTTTTCCAC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGAGAGCAGCTTCACGAACGCGCCCGCGAAAA
GTGCACTGCCGTACAGGCAGCTTAGAAA

>NZ_CP041247|4|2|2314085-2315012|CRT
GTGCACTGCCGTACAGGCAGCTTAGAAA	CGCAAATAACACGATCTCTGAACAGGTCAAGA
GTGCACTGCCGTACAGGCAGCTTAGAAA	GGGTAGCGCCGCTTAATTAATGCATCATTGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGCGGGCATGGTCAGCGCTGCAGATATCGTT
GTGCACTGCCGTACAGGCAGCTTAGAAA	ATCAGAGAGGCGGCATTGTTTGACGAGGACGG
GTGCACTGCCGTACAGGCAGCTTAGAAA	ACCCGTGACGCGGCCAGCGGTCAGGCGTTCCT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTTTAAACCGGGACAGTGAAACAAACGTCAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGCACATCGCTTTGCCTGGCAAGGCACAGATA
GTGCACTGCCGTACAGGCAGCTTAGAAA	ACATAGAGCAGGCGCGATTGGCGTAGCGAATT
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTAACTTTGACCACGGTATAAAGCCCACCAG
GTGCACTGCCGTACAGGCAGCTTAGAAA	TGGTTGATGCTCGCAACAAGGTTGAAGCCGCG
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGTAATTCGTCCGATGCCTCGATGATGGCGAT
GTGCACTGCCGTACAGGCAGCTTAGAAA	TCAAGCCGGAATGTTCCTGGCTCGTCGCCGAC
GTGCACTGCCGTACAGGCAGCTTAGAAA	GACACCGAATCGTCTGTAAATGTCGGGATGAA
GTGCACTGCCGTACAGGCAGCTTAGAAA	CAGATCCGCAGCGTTCCGCCATGGTTTTCCAC
GTGCACTGCCGTACAGGCAGCTTAGAAA	AGAGAGCAGCTTCACGAACGCGCCCGCGAAAA
GTGCACTGCCGTACAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041247.1\|WP_141964469.1\|2309095_2310406_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP041247.1\|WP_004862736.1\|2325641_2325731_+\|YnhF-family-membrane-protein	unknown	unknown	gnl\|CDD\|341227
NZ_CP041247.1\|WP_141964471.1\|2312356_2312911_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP041247.1\|WP_141964467.1\|2304758_2305742_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP041247.1\|WP_100683653.1\|2324320_2325346_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP041247.1\|WP_131047979.1\|2311348_2312347_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP041247.1\|WP_100683647.1\|2317416_2318310_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176166
NZ_CP041247.1\|WP_141964476.1\|2322096_2323281_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP041247.1\|WP_141964474.1\|2316011_2316488_-\|acid-resistance-repetitive-basic-protein-Asr	unknown	unknown	gnl\|CDD\|237855
NZ_CP041247.1\|WP_141964470.1\|2310402_2311338_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|187867
NZ_CP041247.1\|WP_131047988.1\|2323390_2324302_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP041247.1\|WP_141964472.1\|2312932_2313406_-\|RES-domain-containing-protein	unknown	unknown	gnl\|CDD\|227941
NZ_CP041247.1\|WP_141964475.1\|2320652_2321801_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP041247.1\|WP_141964473.1\|2313402_2313846_-\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|131346
NZ_CP041247.1\|WP_141964155.1\|2301690_2303247_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP041247.1\|WP_131047985.1\|2318349_2319723_-\|MdtK-family-multidrug-efflux-MATE-transporter	unknown	unknown	gnl\|CDD\|234981
NZ_CP041247.1\|WP_131047984.1\|2316679_2317309_-\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224996
NZ_CP041247.1\|WP_141964468.1\|2305738_2308966_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP041247.1\|WP_165785358.1\|2303612_2304182_-\|DJ-1/PfpI/YhbO-family-deglycase/protease	unknown	unknown	gnl\|CDD\|153243
NZ_CP041247.1\|WP_100683649.1\|2319952_2320588_+\|riboflavin-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183846

Protein	Function_ID	Function_description	E-value
NZ_CP041247.1\|WP_141964469.1\|2309095_2310406_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	3.74326e-160
NZ_CP041247.1\|WP_004862736.1\|2325641_2325731_+\|YnhF-family-membrane-protein	gnl\|CDD\|341227	PRK14756, small_mem_YnhF, YnhF family membrane protein; Validated.	0.00492897
NZ_CP041247.1\|WP_141964471.1\|2312356_2312911_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.95901e-93
NZ_CP041247.1\|WP_141964467.1\|2304758_2305742_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP041247.1\|WP_100683653.1\|2324320_2325346_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP041247.1\|WP_131047979.1\|2311348_2312347_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP041247.1\|WP_100683647.1\|2317416_2318310_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176166	cd08477, PBP2_CrgA_like_8, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 8. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.2616e-84
NZ_CP041247.1\|WP_141964476.1\|2322096_2323281_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP041247.1\|WP_141964474.1\|2316011_2316488_-\|acid-resistance-repetitive-basic-protein-Asr	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	2.50316e-05
NZ_CP041247.1\|WP_141964470.1\|2310402_2311338_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	2.08262e-127
NZ_CP041247.1\|WP_131047988.1\|2323390_2324302_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP041247.1\|WP_141964472.1\|2312932_2313406_-\|RES-domain-containing-protein	gnl\|CDD\|227941	COG5654, COG5654, Uncharacterized conserved protein [Function unknown].	2.22432e-29
NZ_CP041247.1\|WP_141964475.1\|2320652_2321801_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP041247.1\|WP_141964473.1\|2313402_2313846_-\|DUF2384-domain-containing-protein	gnl\|CDD\|131346	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module. [Cellular processes, Other].	1.83293e-46
NZ_CP041247.1\|WP_141964155.1\|2301690_2303247_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.43499e-122
NZ_CP041247.1\|WP_131047985.1\|2318349_2319723_-\|MdtK-family-multidrug-efflux-MATE-transporter	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP041247.1\|WP_131047984.1\|2316679_2317309_-\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|224996	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only].	2.17158e-39
NZ_CP041247.1\|WP_141964468.1\|2305738_2308966_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP041247.1\|WP_165785358.1\|2303612_2304182_-\|DJ-1/PfpI/YhbO-family-deglycase/protease	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.92116e-108
NZ_CP041247.1\|WP_100683649.1\|2319952_2320588_+\|riboflavin-synthase-subunit-alpha	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	1.38459e-123

>NZ_CP041247.1|WP_141964473.1|2313402_2313846_-|DUF2384-domain-containing-protein
MRTWVPEQKPADNALWRYAGLPANRGMRLIEFLNQGLPVSVLDNIHEWTEMSKADILRVTGINERNVARRKSAGRTLTPDESERVARFVRVLDAAVDYFGSKDEAWNWLQSPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
>NZ_CP041247.1|WP_141964472.1|2312932_2313406_-|RES-domain-containing-protein
MIFYRLVMGRYASEAWSGSGANQYGGRWNHKGHPAVYVSASISLASLEILVHVKKDAVLNQYQLFSIDIPDDQIEYLDQHWLPEDWQENPAPVSTMDLGTGWLQATSALALVLPSCIIPYENNAIINPLHPAFHQALASVQQYPFVFDTRLAEKTAS
>NZ_CP041247.1|WP_141964471.1|2312356_2312911_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLEIRVLPDPEFSEEMLMAALVARLHRALGRRGKGDIGVSFPSHHIKPGAVLRLHGQHRALNELESTGWRKGLNDYCLCSQVQPVPEAASWRCVSRVQVKSSPERLLRRSVRKGWLTEEEAQKLMATMEEERTDLPWLNLRSLSSGQSFRLFIRHGDLLPAPVAGLFSTYGLSATATVPWF
>NZ_CP041247.1|WP_131047979.1|2311348_2312347_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAPTAVKTASVLAFERKLATSDAVMYSGRWQGNEWQPVRVQEKAVRGTISNRLKNALTSDPAKLDAEIQKANLQRVDVAALSAEADTLLVKFSLRVLGNLSTPSVCNDRDYQDALRQVIDGYIRENGFAELARRYATNLANGRFLWRNRVGAEKIVVKVTGSKEWTFDAHEYGLRDFSASDKSLDELAREIEKGLSGEGFVLLNVEAQVFLGAGQEVFPSQELVLDSNSSKSRLLYQVDDIAGMHSQKIGNALRTIDTWHPEADELGAIAVEPYGSVTSRGVACRQPREKMDFYTLLDNWVTKGQTPDKKQQHYVMAVLIRGGVFGEKSE
>NZ_CP041247.1|WP_141964470.1|2310402_2311338_+|type-I-F-CRISPR-associated-protein-Csy2
MSSLILLRRIKVENANAVAGLTYGFPAITHFLGFAHALSRRLTQTHGLRIDGCAVVSHEHQIHAHISGRDYQFALTRNPLTREAKTASFNEEGRMHLTVSLLLECHGEIPNGEYGQRELADYLAQVCPTFRLAGGIIVSIEGISVMPMPATGREMYRLQWQLMPGFALRDRSSWLCEHHQMLLENDPAATLLDAWLDFAALKIQAETPEDKGIQEGDPAEWRHVPKPKPGFLVPLMTGYQRISELYAPGVVVNARDAQTPFAFTEAVYAIGEWCGLHRIQSLDDIFWRYHTTETGYYCQGAGAPLAPEHLK
>NZ_CP041247.1|WP_141964469.1|2309095_2310406_+|type-I-F-CRISPR-associated-protein-Csy1
MDEGALIAALRNYIAGRRQAKLEAFDKAAAKRSDADSATLAAERRELELRYEPKAWLTDAAKRAGQINLVTHAAKFTHGDSKSSSIFSEAVAQEGYLSSATMSGLEPDAVGNAAALDVAKLLQMRIENGDSLLASLKRDDRSPLAAFTDDAAELAEWVSGFSRAFTPGEPASHKLAKQGYFPVGDDYRLLSPLFATSLAHAVHQRMIALRFGDDVKAIWKARREKTWHPTPLTLFPDAAEMHFGGTKPQNISYLNSVRGGRTWLLSCQPPQWKRAEKKPTNLRSVFTFGGQFDRRANGKLQLLVSLLTRTGDYTSFRIREARDEYIDALIDLLFDVVSDLQRETWQNWTLDCPELKAHQQLWLDPWRTKTDEAFRLERDKDDWQAKVAEDFALWLNARLRKALPDVGAVEKHEWETRERLRTNLREMEKIIQEALK
>NZ_CP041247.1|WP_141964468.1|2305738_2308966_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILIISRCTKKAREESCRIIDQFAERTGDAAWQTAITLDGVNTLRKLLRKTARRNTAVACHWLKKNGQTELLWIVGNIRRFNAQGRAPTNRTTLDVLKNGAEHRWNSAESIALLAAIAGLFHDFGKAGMCFQQTLRGESQHVCQPYRHEWISVRLFQAFVGERTDEQWLGRLGQLNASDEKEMLKAVKMDSPTWTCSPLSTLPPLAKVVGWLMLSHHRLPQSLSAQPQLMYCEGWIERQLNADWNSLNHTSSGKHQWKDRDFKNVWKFPHGTPLKSKTWREKARQIGKRIRNLPGLLHYGSLDNLFTLHLARLSLMLADHVYSSQPAYAGWQDEAIQTWANSDRQTRQLKQKLDEHNIGVAHHALLLGRSLPTLRRTLPAIARHKTFRERAKDARFLWQNKAWDVALSLRDKSVEQGFFGINMASTGCGKTFANARIMYALSDEQEGCRFSVALGLRTLTLQTGQALQSRLGLDDDTLAVVTGSAAVRELYQGNDGEDTNSASDEAFFACHHYVHYEGATGSGIARQWLAQEPALNRLVSAPVLVTTIDHLMPATEGVRGGRQIPAMLRLLTSDLVLDEPDDFDIDDLHALCRLVNWAGMLGSRVLLSSATLPPALTEALFEAYREGRKAWQAACGVSGRPVNICCAWFDEYGAQSHDVADEALFRQAHGKFVTQRVKRLPEKPCLRLGKLAIVALHSAGNSGIVSAVANTLHQQMRILHQHHNTHKNGKTVSFGLVRLANINPLVAIAQTLMEIPSPENYRIHYCVYHSQHPLAVRALIEKRLDGAFTRHDPQAIWQLPEVQQALAMPEQNHLFVVLGTSVLEVGRDFDADWGIAEPSSMRSLIQFAGRIQRHRQHVPVRENLVILERNVRALQGKTVAYCRPGFETEKHLLPYHDMHDLLSEESCRTIDAVPRIAESIPGNRLAALEHTRLRAALLDGGDKQEAIAASWWRLPLTWSGELQRRTPFRRSSPQASFFLSMEEDDDEPEFCLMQENGGLKPAGRFRWQALTLADGVQPWFGVDYAQVLLALAESKQMELAAVSRRFGEITLRVAKEEETEEWLYHPVLGVFRAL
>NZ_CP041247.1|WP_141964467.1|2304758_2305742_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MPENTITPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYVTQEGKESFYWNIPIANTTAVMLGMGTSVTQMAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLCPQSEYRPTGYLQNWVSFWFDEAKRLQAAKTFQFIRLQQIEKQWSGLRMQRETSFQSDMDVLQAILERARQGMESANDHTSLMLQEAQLTKSLYKLASQTVGYGNFTRAKRGGGVDTANRFLDQGNYLAYGLAAVAAWVTGIPHGLAVMHGKTRRGGLVFDIADLIKDALVLPQAFIAAMEGEDNQMFRQRCINVFQQADALDVMIATLQETSLSLAKVAP
>NZ_CP041247.1|WP_165785358.1|2303612_2304182_-|DJ-1/PfpI/YhbO-family-deglycase/protease
MMSKKILMLVGDYAEDYETMVPFQALQMIGHQVDAVCPDKSKGDYIMTAIHDFDGAQTYSEKPGHRFVLNADFAAVKEQDYDALLIPGGRAPEYLRLNDEVLKLVQAFDAAHKPIAAVCHGPQLLAAAGILKGRTCSAYPACAPEVRLSGGHYAEIGIDQAHVDGNLVTAPAWPAHPQWLAKFAEVLQQ
>NZ_CP041247.1|WP_141964155.1|2301690_2303247_+|IS66-family-transposase
MNNTLPDDIEQLKALLIAQQAVIVRLSGEITGYAREIDSLRALVAKLQRMLFGRSSEKNREKIEKKIAQAEKRITELQNRLGEAQSQLTSMAGDTGSKTSDTPARKALPVTLPRDRRVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPKLACSRCDCIVQAPLPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELSRNTMGRWVDIMGEQLRPLYDELNHYVLMPGKVHADDTPVSVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYSGILQADAYAGYNALYESGRVTEAACMAHARRKLHDVHVRHPTAVTAEALNRIGALYAIESEIRGSPAEERLTARKARSVPLMQSLYDWIQQQMGTLSRHSDTAKAFAYLLKQWDALNEYCRNGWVEIDNNLCENALRVVALGRRNYMFFGSDSGGDSAAVMYSLLGSCKLNGIEPEAWLHHVISVINTWPANRVKDLLPWNVTLSVN
>NZ_CP041247.1|WP_141964474.1|2316011_2316488_-|acid-resistance-repetitive-basic-protein-Asr
MKKVLALVVAAAMGLSSAAFAADAVSTTQAPAAATHSTTAKTVHHKKQHKTAAKPAAEQKAQAAKKHHKAAAKPAAEQKAQAAKKHHKAAAKPAAEQKAQAAKKHHKAATKPVAQKAQAAKKHHKAAAKPVAQKAQAAKKHHKAAKHHAAKPAAQPAA
>NZ_CP041247.1|WP_131047984.1|2316679_2317309_-|NAD(P)-binding-domain-containing-protein
MKIGIIGAGFVGRSVAKLALAAGHDVMLSNSRGPQTLFSLGPMIGSQVGSANDAAEFGEVVVIAVPLSAIHSLPVAAIKDKHVIDAVNYYPERDGPVEALESGDITTSELLAQILPAATVTKAFNAIPMTQLESDGLPAGAENRRALPLAGDSEEGKAIAAALYEAFGFDTVDAGPLSEGWRFERGQPAYCVPMTRPALLTALSRTPRR
>NZ_CP041247.1|WP_100683647.1|2317416_2318310_+|LysR-family-transcriptional-regulator
MDQLTSIRVFVKAAETGSFAATAAQLRLSPQMVARHVAALEAHLGTSLIARTTRRQTLTDIGRGYYERCRVVLAEIAEADAVAQEMKATPSGIIRVNAPVTFGSHALAAFITDYLARYPDVQVELTLSDRIVDPIEEEFEVIVRIGELADSSMVAWPLLPYRLIACASPDYILRHGEPQTPTDLQQHACLVYGHWSAGSACRWQFEKEGTMFEVKPSGRLRANDWKALMNAAIAGHGITLGPEEVLKTEVARGSLVQVLAGYSGPARPMHVLVPTGRRRTTKIKCFVDALRAALGPR
>NZ_CP041247.1|WP_131047985.1|2318349_2319723_-|MdtK-family-multidrug-efflux-MATE-transporter
MQKYFIEARQLLALAIPVILAQVAQTSMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRDRIAHQVRQGFWLAGLVSLLVMVVLWNAGYIISSMHNIDPALAEKAVGYLRALLWGTPGYLFFQVARNQCEGLAKTKPGMVIGFIGLLVNIPVNYIFIYGHFGMPELGGIGCGVATASVYWVMFFCMISWVRRARSMRDIRSDESFSGPDFGVLKRLAQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPLSLAAAVTIRVGFRLGQGSTLDAQVSARTGVGVGVCMAVVTAIFTILMRKQIALLYNDSPEVVLLASQLMLLAAIYQISDSVQVIGSGILRGYKDTRSIFFITFTAYWVLGLPSGYLLALTDTLVPRMGPAGFWCGFIIGLTSAAVMMMLRMRFLQRQPSSVILQRAAR
>NZ_CP041247.1|WP_100683649.1|2319952_2320588_+|riboflavin-synthase-subunit-alpha
MFTGIVQGTAKVVSIDEKPNFRTHVVELPEHMLAGIETGASVAHNGCCLTVTEIDGPRISFDLMKETLRITNLGAVEVGDVVNVERAAKFSDEIGGHLMSGHIMTTAEIVKILTSENNRQIWFKVQDPTLMKYILYKGFIGVDGISLTVGEVTPTRFCVHLIPETLQRTTLGVKKLGDRVNIEIDPQTQAVVDTVERVLAAKEAAQRLSDE
>NZ_CP041247.1|WP_141964475.1|2320652_2321801_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPNDDWYRIATELLGRAGIEVNGPSPSDLQINNPLFFKRVLQEGSLGLGESYMDGWWDCERLDLFFHKVLRAGLENQLPHHLKDTLRVAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPYMQYSCAYWKEAQSLEEAQVAKLDLICRKLQLEPGMRVLDIGCGWGGLAYYMAKNYHVSVVGVTISAEQQKMAQQRCEGLDVTILLQDYRDLHDHFDRIVSVGMFEHVGPKNYATYFDVVDRNLKPDGRFLLHTIGSKKTDHSVDPWINKYIFPNGCLPSVRHIAQASESHFVMEDWHNIGADYDTTLMAWYERFLASWPEIADNYSERFKRMFSYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP041247.1|WP_141964476.1|2322096_2323281_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQQPGKGFLVWLAGLSVLGFLATDMYLPAFSAIQQDLNTSAASVSASLSLFLAGFAIGQLFWGPLSDRYGRKPILLTGLAIFAIGCLGMLWVRDATLMLALRFIQALGVCAAAVTWQAMVTDYYPAQRTNRIFATIMPLVGLSPALAPLLGSWLLAHLEWQTIFATLFAIALLLMVPALRLKPVARPQGDAREKLTFMTLLRSREYSGNVLIYAACSASFFAWLTGSPFILHEMGYGPTAIGLSYVPQTIAFLVGGYGCRAALQKWQGQQLLPWLLVIFAVSVAATWMVGLAADASIIVVMIPFCVMAIVNGGIYPIVVAQALKPFPQATGRAAALQNTLQLGLCFMTSLLVSALIATPLLTTTSVMLVSIVLAGLGYFMQRQSVCLTTESSHA
>NZ_CP041247.1|WP_131047988.1|2323390_2324302_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTPAGLWFLQEGRSVIKKMQITRQQCQQIANGWRGQLSIAVDDIVKPARMRQMIVDFYRHFPDVELIVFQEVFNGVWDALADGRVELAIGATRSIPVGGRYAFRDMGMLSWDCVVASHHPLAQMTGPLSDDVLRNWPSLVREDTSRSLPKRTTWLLDNQKRVVVPDWESSATCLSAGLCVGMVPSHFARPWIDRGEWTALALENPFPDAACCLTWQQSDASPALSWLLDYLGDSETLNREWLRAPE
>NZ_CP041247.1|WP_100683653.1|2324320_2325346_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKSCFQKGYTLILGNAWNDPEKQQAYLSMMAQKRVDGMLVMCSEYPESVLSMLEEYRHIPMVVMDWGESKADFTDSVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAQIAVPENWIVQGDFEPESGYRAMQQILSQQHRPTAVFCGGDIMAMGAICAADEMGLRVPQDISLIGYDNVRNARYFSPALTTIHQPKDSLGEAAFNMLMDRIVNKREESQSIEVHPRLVERRSVVDGPFVDYRR
>NZ_CP041247.1|WP_004862736.1|2325641_2325731_+|YnhF-family-membrane-protein
MDTDLKFSLTTTIIVLGLIVAAGLTAVLH

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Crispr_ID: NZ_CP041247_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041247_5

4339432-4339497

Orphan

Consensus_repeat	Method
AAAGCACCACCAGGGATACTTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041247_5

>merge|NZ_CP041247|5|4339432-4339497|CRISPRCasFinder
AAAGCACCACCAGGGATACTTTTTTTGTCGCCCTGTTAAGCAAAGCACCACCGGGATGCATTTTTG

>NZ_CP041247|5|5|4339432-4339497|CRISPRCasFinder
AAAGCACCACCAGGGATACTTTTTT	TGTCGCCCTGTTAAGC
AAAGCACCACCGGGATGCATTTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041247.1\|WP_141965307.1\|4351428_4351965_+\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|185079
NZ_CP041247.1\|WP_141965306.1\|4348926_4351356_-\|ATP-dependent-helicase-HrpB	unknown	unknown	gnl\|CDD\|236950
NZ_CP041247.1\|WP_131049289.1\|4330571_4332011_-\|serine-endoprotease-DegP	unknown	unknown	gnl\|CDD\|236802
NZ_CP041247.1\|WP_141965299.1\|4334434_4335235_+\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	unknown	unknown	gnl\|CDD\|179575
NZ_CP041247.1\|WP_004858018.1\|4352845_4353301_+\|RNA-polymerase-binding-protein-DksA	unknown	unknown	gnl\|CDD\|182722
NZ_CP041247.1\|WP_141965297.1\|4329223_4330381_-\|CdaR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183155
NZ_CP041247.1\|WP_131049269.1\|4335378_4336002_+\|TRIC-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|182564
NZ_CP041247.1\|WP_131049258.1\|4351964_4352681_+\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NZ_CP041247.1\|WP_141965298.1\|4332144_4333659_-\|dGTPase	unknown	unknown	gnl\|CDD\|235320
NZ_CP041247.1\|WP_141965302.1\|4339569_4341552_-\|Fe(3+)-hydroxamate-ABC-transporter-permease-FhuB	unknown	unknown	gnl\|CDD\|236720
NZ_CP041247.1\|WP_141965301.1\|4338093_4339374_+\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|234607
NZ_CP041247.1\|WP_141965303.1\|4342438_4343236_-\|Fe3+-hydroxamate-ABC-transporter-ATP-binding-protein-FhuC	unknown	unknown	gnl\|CDD\|182561
NZ_CP041247.1\|WP_100682518.1\|4353363_4354245_+\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl\|CDD\|274810
NZ_CP041247.1\|WP_131049265.1\|4341548_4342439_-\|Fe(3+)-hydroxamate-ABC-transporter-substrate-binding-protein-FhuD	unknown	unknown	gnl\|CDD\|236719
NZ_CP041247.1\|WP_004858085.1\|4336059_4336404_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_CP041247.1\|WP_141965305.1\|4345725_4348275_-\|bifunctional-glycosyl-transferase/transpeptidase	unknown	unknown	gnl\|CDD\|236544
NZ_CP041247.1\|WP_141965300.1\|4336485_4337904_-\|H(+)/Cl(-)-exchange-transporter-ClcA	unknown	unknown	gnl\|CDD\|235385
NZ_CP041247.1\|WP_100682506.1\|4333743_4334442_+\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|180148
NZ_CP041247.1\|WP_141965304.1\|4343282_4345496_-\|ferrichrome-porin-FhuA	unknown	unknown	gnl\|CDD\|236643
NZ_CP041247.1\|WP_100682502.1\|4328766_4329153_+\|DUF3461-family-protein	unknown	unknown	gnl\|CDD\|184234

Protein	Function_ID	Function_description	E-value
NZ_CP041247.1\|WP_141965307.1\|4351428_4351965_+\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|185079	PRK15124, PRK15124, RNA 2',3'-cyclic phosphodiesterase.	8.76402e-115
NZ_CP041247.1\|WP_141965306.1\|4348926_4351356_-\|ATP-dependent-helicase-HrpB	gnl\|CDD\|236950	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional.	0
NZ_CP041247.1\|WP_131049289.1\|4330571_4332011_-\|serine-endoprotease-DegP	gnl\|CDD\|236802	PRK10942, PRK10942, serine endoprotease DegP.	0
NZ_CP041247.1\|WP_141965299.1\|4334434_4335235_+\|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF	gnl\|CDD\|179575	PRK03379, PRK03379, vitamin B12-transporter protein BtuF; Provisional.	2.34905e-160
NZ_CP041247.1\|WP_004858018.1\|4352845_4353301_+\|RNA-polymerase-binding-protein-DksA	gnl\|CDD\|182722	PRK10778, dksA, RNA polymerase-binding protein DksA.	1.22395e-91
NZ_CP041247.1\|WP_141965297.1\|4329223_4330381_-\|CdaR-family-transcriptional-regulator	gnl\|CDD\|183155	PRK11477, PRK11477, CdaR family transcriptional regulator.	0
NZ_CP041247.1\|WP_131049269.1\|4335378_4336002_+\|TRIC-cation-channel-family-protein	gnl\|CDD\|182564	PRK10578, PRK10578, hypothetical protein; Provisional.	2.32116e-129
NZ_CP041247.1\|WP_131049258.1\|4351964_4352681_+\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	6.65971e-142
NZ_CP041247.1\|WP_141965298.1\|4332144_4333659_-\|dGTPase	gnl\|CDD\|235320	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional.	0
NZ_CP041247.1\|WP_141965302.1\|4339569_4341552_-\|Fe(3+)-hydroxamate-ABC-transporter-permease-FhuB	gnl\|CDD\|236720	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB.	0
NZ_CP041247.1\|WP_141965301.1\|4338093_4339374_+\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_CP041247.1\|WP_141965303.1\|4342438_4343236_-\|Fe3+-hydroxamate-ABC-transporter-ATP-binding-protein-FhuC	gnl\|CDD\|182561	PRK10575, PRK10575, Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC.	0
NZ_CP041247.1\|WP_100682518.1\|4353363_4354245_+\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl\|CDD\|274810	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase. This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid. [Protein synthesis, tRNA and rRNA base modification].	1.93436e-152
NZ_CP041247.1\|WP_131049265.1\|4341548_4342439_-\|Fe(3+)-hydroxamate-ABC-transporter-substrate-binding-protein-FhuD	gnl\|CDD\|236719	PRK10576, PRK10576, Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD.	0
NZ_CP041247.1\|WP_004858085.1\|4336059_4336404_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	2.61532e-81
NZ_CP041247.1\|WP_141965305.1\|4345725_4348275_-\|bifunctional-glycosyl-transferase/transpeptidase	gnl\|CDD\|236544	PRK09506, mrcB, bifunctional glycosyl transferase/transpeptidase; Reviewed.	0
NZ_CP041247.1\|WP_141965300.1\|4336485_4337904_-\|H(+)/Cl(-)-exchange-transporter-ClcA	gnl\|CDD\|235385	PRK05277, PRK05277, H(+)/Cl(-) exchange transporter ClcA.	0
NZ_CP041247.1\|WP_100682506.1\|4333743_4334442_+\|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase	gnl\|CDD\|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	7.62057e-138
NZ_CP041247.1\|WP_141965304.1\|4343282_4345496_-\|ferrichrome-porin-FhuA	gnl\|CDD\|236643	PRK10044, PRK10044, ferrichrome outer membrane transporter; Provisional.	0
NZ_CP041247.1\|WP_100682502.1\|4328766_4329153_+\|DUF3461-family-protein	gnl\|CDD\|184234	PRK13677, PRK13677, DUF3461 family protein.	4.24478e-81

>NZ_CP041247.1|WP_141965301.1|4338093_4339374_+|glutamate-1-semialdehyde-2,1-aminomutase
MSKSETLYSAARELIPGGVNSPVRAFSGVGGTPLFIERADGARLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAELVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCTYNDLTSVRAAFEQYPQEIACIIVEPVAGNMNCIPPLPAFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQSYYDVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLTDLTNQLSQGLLDAAREAGIPLVVNNVGGMFGLFFIDAETVTCYQDVLKCDVERFKRFFHLMLDEGVYLAPSAFEAGFMSIAHTPDDINDTIAAARKAFAKL
>NZ_CP041247.1|WP_141965300.1|4336485_4337904_-|H(+)/Cl(-)-exchange-transporter-ClcA
MKTEASTFEAKQIVRLRRGDVVRRLVQRDKTPLAVLLMAAVVGTLAGLVGVAFEKSVNWVQNMRIGSLAQVADHGFLIWPLAFILSALLAMVGYFLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMVLGREGPTVQLGGNVGRMVLDIFRMRSPEARHTLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAVFTGVIMSSIVFRIFNGESAIIEVGKLSDAPVNTLWLYLILGMIFGCVGPLFNSLVLRTQDMFQRIHGGNTKKWVLIGGLIGGMCGVLGLIQPAATGGGFNLIPIAAAGNFSVGLLLFIFVARVITTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAVTPMLPAYHLDAGTFAIAGMGALLAASIRAPLTGIVLVLEMTDNYQLILPMIITCLGATLLAQFLGGKPLYSTILERTLAKQAAEQAAKAQQVAGENT
>NZ_CP041247.1|WP_004858085.1|4336059_4336404_-|iron-sulfur-cluster-insertion-protein-ErpA
MSDDVALPLEFTEAAAKKVKFLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGAVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSV
>NZ_CP041247.1|WP_131049269.1|4335378_4336002_+|TRIC-cation-channel-family-protein
MLVYWLDIIGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTSMMTILLVRQPRRLPKWILPVLDAVGLAVFVGIGVNKAFLAHSGPLVAICMGVVTGVGGGIIRDVLAREIPMILRTEIYATACIAGGIVHATAYDAFHVSLQNSAMMGMVVTLMIRLAAIRWHLKLPTFALDDNGR
>NZ_CP041247.1|WP_141965299.1|4334434_4335235_+|vitamin-B12-ABC-transporter-substrate-binding-protein-BtuF
MAKSLKRALAALLLLTPAWLFAAPRVITLSPSNTELAFAAGITPVGVSSHSDYPAEAVGIEQVASWQGMNLERIVALKPDLILAWRGGNAERQVNQLSALGIKVLWVNTATIEEIIATLRQLAQWSPQPEKARASAQRMQDDYDVLKARYAHTPKKRVFLQFGANPLFTSSRGSIQDQVLTLCGGDNIFASSPVPWPQVSREQVLARQPQAIVIAGDARQLPEVERYWHNQLKISLIAVDGDWFERASPRIILAAKQLCEALGQVK
>NZ_CP041247.1|WP_100682506.1|4333743_4334442_+|5'-methylthioadenosine/S-adenosylhomocysteine-nucleosidase
MKIGIIGAMEEEVTLLRDKIENRQTLTHGGSEIYTGQLNGTDVVLLKSGIGKVAAAMGAALLLEICKPDVIINTGSAGGLASTLKVGDIVISDETRYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAQSCIEALNLHAVRGLIVSGDAFINGSVGLAKIRHNFPQAVAVEMEATAIAHVCHNFGVPFVVVRAISDVADQQSHLSFDEFLAVAARQSTLMVEKLVQTLARG
>NZ_CP041247.1|WP_141965298.1|4332144_4333659_-|dGTPase
MAKIDFRNKINWRRRYRSPQGVETEREILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSLEVQQVGRYIAKEILSRLKEQRQLEAYGLDDLTGPFESVVEMACLMHDIGNPPFGHFGEAAINDWFRQRLAPDDAAGAPLAQDRCTVEALRLQEGAGGLNGLRSKVRQDLCWFEGNAQGIRLVHTLMRMNLTWAQVGCILKYTRPAWWRGELPASHSYLMKKPGYYLAEEGYIERLRKELALAPYNRFPLTWIMEAADDISYCVADLEDAVEKRIFSVEQLYQLLHEAWGQHEKGSLFSQVVENAWDKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAARRFIDNLPKIFTGDFNHALLEDDSDCSQLLELYKNVAIKHVFSHPDVEQLELQGYRVISGLLDIYEPLLKLSLEEFSLLVEKERVRSLPIASRLFQKLSTRHRLAYVEAVNKVSRDAEEFPVMEYYYRCRLIQDYISGMTDLYAWDEYRRLMAVE
>NZ_CP041247.1|WP_131049289.1|4330571_4332011_-|serine-endoprotease-DegP
MKKTTLAMSALALSLGLALSPLSASAAETSSSASSTQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDNSPFCQDGSPFQSSPFCQGGGQGGGAPADGSQQQKFMALGSGVIIDANKGYVVTNNHVVDNATTIKVQLSDGRKFDAKVVGKDPRSDIALIQIQDPKDLTAIKLADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNVENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTEQMVKYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVMPGSAAAKAGIKAGDVITSLNGKSISSFAALRAQVGTMPIGSKVELGLVRDGKAVNATVELQQSSQNQVDSSTIFNGIEGAEMSNKGQDKGVVVNNVKAGTPAAQIGLKKGDIIVGANQQPVKNIADLRKIFDAKPSVLALNIQRGDSTIYLLMQ
>NZ_CP041247.1|WP_141965297.1|4329223_4330381_-|CdaR-family-transcriptional-regulator
MAGWHLDTNMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDNAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPETLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAMIEVDSGQLGVDSAMAELQQLQTALTTPDRHNLVAIVSLTEMVVLKPALNAFGRWDAEDHRKRIDQLIARMKENGQLRFRVALGNFFTGPGSIARSWRTARTTMMVGKQRMPESRSYFYQDLMLPVLLDSLRGGWQANELARPLVRLKAMDNNGLLRRTLQAWFRHNVQPLATSKALFIHRNTLEYRLNRIAELTGLNLGNFDDRLLLYIALQLDEQR
>NZ_CP041247.1|WP_100682502.1|4328766_4329153_+|DUF3461-family-protein
MYDNLKSLGITNPDEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYVIDELDQICQRDRTEVDLKRKILDDLRHLESVVTHKISEIEADLEKLTRK
>NZ_CP041247.1|WP_141965302.1|4339569_4341552_-|Fe(3+)-hydroxamate-ABC-transporter-permease-FhuB
MRSRLSPLAALLLTVLAIAAFALSFLNLQAALPQHEWRQALWQPDIDNIAQMLFHYSLLPRLAVSLLVGAGLGLVGLLFQQVLRNPLAEPTTLGVATGAQLGMTVTTLWAIPGVLASQFAALAGACFVGALVFGVSWGKRLSPVTLILAGLVVSLYCGALNQLMVIFHHDQLQSMFLWSTGTLTQTDWSVVQRLWPQLLGGFILTLLLLRPLTLMGLDDGVARNLGLALSLARLATLTLAIVISAMLVNAVGIIGFIGLFSPLLAKMLGARRLLSRLLLAALIGALILWLSDQIILWLTRVWREVSTGSVTALIGAPLLLWLLPRLRSISAPVMNAGDKVPVERQNVSGFALGGVLILLLALLVALAFGRDAQSWHWASGSQLDQLMPWRWPRVFAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGIVLMLFFVPGNAFGWLLPAGSLGAAVTLLVILVAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQILTWISGSTYSATPEMVIRSGIAMVLLLILLPLCRRWLTILPLGGEAARAVGMALTSSRVVLLLLAACLTAAATLTIGPLSFVGLMAPHIARMMGFRRTMPQMVMAGLIGGLLLVFADWCGRMMMFPYQIPAGLLSTFIGAPYFIYLLRKQSR
>NZ_CP041247.1|WP_131049265.1|4341548_4342439_-|Fe(3+)-hydroxamate-ABC-transporter-substrate-binding-protein-FhuD
MEKTPFITRRRLLAAMALSPLLWQMRGAQAATLDPQRIVALEWLPAELLLALGVTPYGVADIPNYNLWVNEPALPSSVIDVGLRTEPNLELLTQMKPSFIVWSAGYGPSAEKLARIAPGRGFTFSDGKRPLLMAQQSLNEMAGLIGRQQAAKRHLAEFDALMENLRPRFAHRGERPLLMITVLDPRHVLVFGQNCLFQEVLDRFGIKNAWRGESAFWGSVSVGIDRLAAYKETDVICFDHGNHAEMRQLMSTPLWQAMPFVREGRFQRVPAVWFYGATLSAMHFARVLADAQGGAA
>NZ_CP041247.1|WP_141965303.1|4342438_4343236_-|Fe3+-hydroxamate-ABC-transporter-ATP-binding-protein-FhuC
MQENSPHADTTFSLNHVTFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSQGDVLLDGQPLDSWGSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGTADRQKVEEAIALVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQQRGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAQLMRSETLEQIYGIAMGILPHPAGSAPVSFVY
>NZ_CP041247.1|WP_141965304.1|4343282_4345496_-|ferrichrome-porin-FhuA
MARPKTAQPNHSLRKIAVVVATAVSGMSVYAQAAVEPKQEETITVIAAPAPQESAWGPAPTIAAKHSATATKTDTPIEKTPQSVSVVTRAEMDIKQPTTVKEALSYTPSVFSTRGSSTTYDVVTIRGFTTSTTVNTNQYLDGMKLQGNNYAEVSMDPYFLERVEVMRGPTSVLYGNSNPGGIVSMVSKRPTTEPLKEIQFKMGTDNLWQTGFDFSDAIDDNGVWSYRLTGLGRSQDAQQQMAKSTRYAVAPSFSWRLDDKTDFTFLSNFQNDPYAGYYGWLPREGTVVPYYDANGNAHKLPTDYNEGEPDNKMSRRQQMVGYSFSHQFDDTFTVRQNLRYSDVKTLYRSVYGNGYSATGQIKRAYVRSDEHLNTFTVDTQLQSDFATGAVNHTLLTGVDYSRMRNDINADYGSADAISMNNPQYGDANVNVNFPYAVLNRMEQTGLYAQDQMEWDKWVMTLGGRYDYAMASTLTRSSDDLAENHDQQFTWRGGINYLFDNGISPYFSYSQSFEPVSGSSREGRPFDPSRGEQYEAGVKYVPKDMPVVVTAAVYQLTKDKNLTADPNDPYGIYSVQTGEIRSRGFELEAKAAVNANINLTAAYSYTDAEYTEDTVFKGKRPAEVPRNMASLWADYTFHENALSGLTVGAGARYIGSTVSYYKNDTDSGKKNDAFNVAGYALMDATVKYDLARFGLPGSSVGINVNNLFDREYVSSCYSEYACYWGAGRQVIATATFRF
>NZ_CP041247.1|WP_141965305.1|4345725_4348275_-|bifunctional-glycosyl-transferase/transpeptidase
MAGDDREPIGRKGKPSRPAKQKVTRRRVRDEDYDDNYDDDDYEDQEPMPKKAKGKGNKPRRKRTWLWLLFKIGVVIAVLVAAYGVYLDQKIRSRIDGKVWELPAAVYGRMVNLEPDMQISKSEMVRLLNATQYRQVSAMTRPGEYTVQAKSIEMIRRPFDFPDSKEGQVRARLTFDGDHLETIENMENNRQFGFFRLDPRLITMLQSANGEQRLFVKRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIVDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQNVIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAATDGIPLLKKQRKLPDLETAMVVVDRFTGEVRAMVGGAEPQFAGYNRAMQARRSIGSLAKPATYLTALSLPNQYRLNTSIADAPITIRLPNGQTWSPQNDDRRFSGQVMLVDALTRSMNVPTVNLGMALGLPAITDTWVKLGAPKDQLHPVPAMILGALNLTPIEVAQAFQTIASGGNRATLSALRSVIAEDGTVLYQSYPQAERVVPAQAAYMTLWTMQQVVLRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGSQVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLALTAPEDVVDMGVDSNGNFVCSGGMRSLPVWTTTPDELCRQGEQMQQQQLEQQQQNNPFNQSGQQQPAQQQQQQQPAKQEKSDGVAGWIKDMFGGN
>NZ_CP041247.1|WP_141965306.1|4348926_4351356_-|ATP-dependent-helicase-HrpB
MSQLPVAAVLPELLSALQQAPQVLLNAPTGAGKSTWLPLQILADGHIDGRIILLEPRRLAARNVAQRLAELLGEKPGETVGYRMRAETCVGPNTRLEVVTEGILTRMIQHDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLREDLKLLIMSATLDNDRLQRLLPSAPTICSEGRAFPVEKRFQALAAHQRFDEAVAIAAAELLRQERGSLLLFLPGVGEIQRVQAQLAERVADDVVLCPLYGALPLSEQRKAILPAAAGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDARTGLTRLMTQRISQASMTQRAGRAGRLEPGICLHLLGKEQAERAAAQSDPEILHSDLSALLLELLQWGCPDPAQLNWLDLPPEANLAAARRLLTALSALEGNRLSARGREMAALGNDPRLAAMLTAATDADDAATAAKLAAILEEPPRGASSDLGAAFARQQPNWQQRARQLLKRLGNRDGQPDAQRLAPLLAPAFVDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQGSASPDARILLALPLDVNALLAQCPGLAQCSDTVEWDEAQGTLKAWRRTCIGQLVLKTQPLAKPSEEELHQAMLNGIRDKGLGVLNWTAEAEQLRLRLHCAAQWLPEEAWPAVDDASLLESLEAWLLPQMSGVHSLRALKALDVRQALQNWLPWSLRQTLDSELPTHYTVPTGSRIAIRYHADNPPALAVRMQEMFGEAATPTIAQGRVALVLELLSPAQRPLQITRDLSAFWQGTYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS
>NZ_CP041247.1|WP_141965307.1|4351428_4351965_+|RNA-2',3'-cyclic-phosphodiesterase
MSEPKRLFFALELPAEAQRQIVHWRAANFAEDAGRPVAADNLHLTLAFLGEVSADKQRALAALAGRIHQPGFTLTLDDAGQWLRSRVVWLGTRRPPRGLLQLASLLRAQAARSGCYQSPQPFHPHITLLREARHAVPIPPPGFSWTFAVSEFVLYESRFSRGRTRYTALERYPFNKES
>NZ_CP041247.1|WP_131049258.1|4351964_4352681_+|DNA/RNA-nuclease-SfsA
MQFNPPLQSATLIQRYKRFLADVVTPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNPKRKYAHTWELTQTQRGAIICVNTLRANILAKEAILAGNIVELSGYNTLKSEVKYGEEKSRIDIMLQAEDRQNCYIEVKSVTLAENDSGYFPDAVTERGQKHLRELMSVAAAGDRAVILFAVLHSAIDCFSPAHHIDARYAQLLIEAQTKGVEILVYKAELSTEMMTLNKPIAAVLTPGK
>NZ_CP041247.1|WP_004858018.1|4352845_4353301_+|RNA-polymerase-binding-protein-DksA
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFKRILEAWRNQLRDEVDRTVSHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGFCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG
>NZ_CP041247.1|WP_100682518.1|4353363_4354245_+|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MNDSHYIGRFAPSPSGELHFGSLIAALGSYLQARAHNGIWRVRIEDIDPPREVPGAASTILRQLEHYGLHWDGEVLWQSQRHEAYRERLAWLHEQGLCYYCTCTRARIHAVGGVYDGHCRDLRLGAHDAALRLRQTRPVLAFDDRLRGPLVADEALAREDFIIHRRDGLFAYNLAVVVDDHFQGVSEIVRGADLIEPTVRQISLYQHFGWQAPDYVHLPLAVNAQGNKLSKQNHAPALPEGDPRPEIMRALMFLNQDIEQEWRALTIEDLLKNAVANWDLQKIQHSQMALSEL

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Crispr_ID: NZ_CP041247_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041247_6

4583636-4583755

Orphan

Consensus_repeat	Method
GCAGCCGATGGAGCCAGTAGCCCGGATAAGGCACGCCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041247_6

>merge|NZ_CP041247|6|4583636-4583755|CRISPRCasFinder
GCAGCCGATGGAGCCAGTAGCCCGGATAAGGCACGCCAGGCACCCCCGGTGGCGCTACGCTTACTGGGGCTACGGGTTTGCAGCCGATGGAGCCAGTAGCCCGGATAAGGCGCGCCAGGC

>NZ_CP041247|6|6|4583636-4583755|CRISPRCasFinder
GCAGCCGATGGAGCCAGTAGCCCGGATAAGGCACGCCAGGC	ACCCCCGGTGGCGCTACGCTTACTGGGGCTACGGGTTT
GCAGCCGATGGAGCCAGTAGCCCGGATAAGGCGCGCCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041247.1\|WP_160702579.1\|4590846_4591707_+\|PTS-system-mannose/fructose/sorbose-family-transporter-subunit-IID	unknown	unknown	gnl\|CDD\|377079
NZ_CP041247.1\|WP_141965386.1\|4591710_4592820_+\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	unknown	unknown	gnl\|CDD\|273623
NZ_CP041247.1\|WP_141965382.1\|4584260_4585169_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176150
NZ_CP041247.1\|WP_141965379.1\|4579954_4580419_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|179596
NZ_CP041247.1\|WP_141965376.1\|4577151_4577406_+\|DUF3343-domain-containing-protein	unknown	unknown	gnl\|CDD\|378728
NZ_CP041247.1\|WP_141965378.1\|4578883_4579951_-\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP041247.1\|WP_141965381.1\|4583823_4584267_-\|FosA-family-fosfomycin-resistance-glutathione-transferase	unknown	unknown	gnl\|CDD\|319908
NZ_CP041247.1\|WP_141965387.1\|4592806_4593553_+\|oxo-acid-lyase	unknown	unknown	gnl\|CDD\|188342
NZ_CP041247.1\|WP_167686286.1\|4586230_4589032_+\|transcriptional-regulator-DagR	unknown	unknown	gnl\|CDD\|226443
NZ_CP041247.1\|WP_100684675.1\|4581017_4581182_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP041247.1\|WP_141965375.1\|4576155_4576395_+\|DUF2164-family-protein	unknown	unknown	gnl\|CDD\|378315
NZ_CP041247.1\|WP_100684676.1\|4581359_4582772_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP041247.1\|WP_141965380.1\|4582912_4583215_-\|toxin-antitoxin-system,-antitoxin-component	unknown	unknown	gnl\|CDD\|226045
NZ_CP041247.1\|WP_131049471.1\|4583201_4583489_-\|BrnT-family-toxin	unknown	unknown	gnl\|CDD\|225481
NZ_CP041247.1\|WP_100684689.1\|4590100_4590850_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|377077
NZ_CP041247.1\|WP_141965385.1\|4589590_4590076_+\|PTS-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NZ_CP041247.1\|WP_141965383.1\|4585256_4586039_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225158
NZ_CP041247.1\|WP_141965374.1\|4574873_4576118_+\|multidrug-efflux-MFS-transporter-MdtM	unknown	unknown	gnl\|CDD\|237958
NZ_CP041247.1\|WP_141965377.1\|4577829_4578894_-\|DUF2955-domain-containing-protein	unknown	unknown	gnl\|CDD\|371403
NZ_CP041247.1\|WP_100684687.1\|4589151_4589580_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446

Protein	Function_ID	Function_description	E-value
NZ_CP041247.1\|WP_160702579.1\|4590846_4591707_+\|PTS-system-mannose/fructose/sorbose-family-transporter-subunit-IID	gnl\|CDD\|377079	pfam03613, EIID-AGA, PTS system mannose/fructose/sorbose family IID component.	9.21525e-110
NZ_CP041247.1\|WP_141965386.1\|4591710_4592820_+\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	gnl\|CDD\|273623	TIGR01437, selA_rel, uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP041247.1\|WP_141965382.1\|4584260_4585169_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176150	cd08461, PBP2_DntR_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold. This CD includes an uncharacterized LysR-type transcriptional regulator similar to DntR, NahR, and LinR, which are involved in the degradation of aromatic compounds. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.50249e-92
NZ_CP041247.1\|WP_141965379.1\|4579954_4580419_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|179596	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional.	8.17134e-23
NZ_CP041247.1\|WP_141965376.1\|4577151_4577406_+\|DUF3343-domain-containing-protein	gnl\|CDD\|378728	pfam11823, DUF3343, Protein of unknown function (DUF3343). This family of proteins are functionally uncharacterized. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.	4.88335e-11
NZ_CP041247.1\|WP_141965378.1\|4578883_4579951_-\|biotin/lipoyl-binding-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	3.16682e-60
NZ_CP041247.1\|WP_141965381.1\|4583823_4584267_-\|FosA-family-fosfomycin-resistance-glutathione-transferase	gnl\|CDD\|319908	cd07244, FosA, fosfomycin resistant protein subfamily FosA. This subfamily family contains FosA, a fosfomycin resistant protein. FosA is a Mn(II) and K(+)-dependent glutathione transferase. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.	2.41829e-69
NZ_CP041247.1\|WP_141965387.1\|4592806_4593553_+\|oxo-acid-lyase	gnl\|CDD\|188342	TIGR03581, EF_0839, conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved].	5.36049e-113
NZ_CP041247.1\|WP_167686286.1\|4586230_4589032_+\|transcriptional-regulator-DagR	gnl\|CDD\|226443	COG3933, COG3933, Transcriptional antiterminator [Transcription].	1.37348e-172
NZ_CP041247.1\|WP_100684675.1\|4581017_4581182_-\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	7.64466e-08
NZ_CP041247.1\|WP_141965375.1\|4576155_4576395_+\|DUF2164-family-protein	gnl\|CDD\|378315	pfam09932, DUF2164, Uncharacterized conserved protein (DUF2164). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.87252e-17
NZ_CP041247.1\|WP_100684676.1\|4581359_4582772_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	5.11281e-150
NZ_CP041247.1\|WP_141965380.1\|4582912_4583215_-\|toxin-antitoxin-system,-antitoxin-component	gnl\|CDD\|226045	COG3514, COG3514, Uncharacterized protein conserved in bacteria [Function unknown].	2.45604e-23
NZ_CP041247.1\|WP_131049471.1\|4583201_4583489_-\|BrnT-family-toxin	gnl\|CDD\|225481	COG2929, COG2929, Uncharacterized protein conserved in bacteria [Function unknown].	2.33069e-36
NZ_CP041247.1\|WP_100684689.1\|4590100_4590850_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|377077	pfam03609, EII-Sor, PTS system sorbose-specific iic component.	2.54795e-77
NZ_CP041247.1\|WP_141965385.1\|4589590_4590076_+\|PTS-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	7.85071e-60
NZ_CP041247.1\|WP_141965383.1\|4585256_4586039_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|225158	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only].	1.48761e-65
NZ_CP041247.1\|WP_141965374.1\|4574873_4576118_+\|multidrug-efflux-MFS-transporter-MdtM	gnl\|CDD\|237958	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM.	0
NZ_CP041247.1\|WP_141965377.1\|4577829_4578894_-\|DUF2955-domain-containing-protein	gnl\|CDD\|371403	pfam11168, DUF2955, Protein of unknown function (DUF2955). Some members in this family of proteins with unknown function annotate the proteins as membrane protein. However, this cannot be confirmed.	1.41196e-34
NZ_CP041247.1\|WP_100684687.1\|4589151_4589580_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	2.2469e-29

>NZ_CP041247.1|WP_131049471.1|4583201_4583489_-|BrnT-family-toxin
MPMEFEWDANKAASNLRKHGIRFEEAVLVFDDPQHLSRQDRYQNGEYRWQTLGLVHGIIVILVAHSVRFESGTEVIRIISARKADKKERSRYEHG
>NZ_CP041247.1|WP_141965380.1|4582912_4583215_-|toxin-antitoxin-system,-antitoxin-component
MNMVKHKRDNPAALTAQREDELKALAKKSDDDIDYSDIPSSDDEQWSEAVRGKFYRPLKTQASVRIDADVMAWLKRPGKGYQTRLNAILREAMLREQNKK
>NZ_CP041247.1|WP_100684676.1|4581359_4582772_+|PLP-dependent-aminotransferase-family-protein
MTRYQHLASLLAERIEQGLYRDGEKLPSVRSLSQEHGVSISTVQQAYQMLEQQRLITPQPRSGYFVAPRKAQPPVPPMSRPVQRPVEITQWDQVLTMLDARNDKSIIPFGGGSPDVTQPSLKPLWRELSRVIQHNINEVLNYDELAGRRELREQIARLMLDGGSVVTVDDLVITSGCHSALSLALLSVCQPGDIVAVESPTYYGTMQLLRGLGLKAIEIPTDPDSGISLEALELALDQWPIKGVILVPNCNNPQGFIMPDARKRAILTLAQRHDIVIFEDDIYGELATDYPRPRTIHSWDIDGRVMLCSSFTKTIAPGLRIGWIAPGRYYDRLLQMKYAASGTNVPSTQLAASIFIREGHYHRHVRRMRQIYQRNMEIYTCWLREYFPCGICVTRPKGGYMLWVELPEHVDMVCVAKQLCRMKIQVAPGSLFSASGKYRNCVRINCALPPIEKHREVMVKLGEAVKVAME
>NZ_CP041247.1|WP_100684675.1|4581017_4581182_-|DUF1127-domain-containing-protein
MEFHENRARQPFIGFILLGRMIRKWWLRQQTRRILQRMSDEQLKDVGLRRDQLN
>NZ_CP041247.1|WP_141965379.1|4579954_4580419_-|MarR-family-transcriptional-regulator
MTEDELFARRPMGMRMAMVVRQWRATIDSAITDTGLTQSSWTVLMQLHQLGDNVSVSELAEVQGIELPPLMRTLTQLESQGYLLRSTSPYDKRIRLLTLTAEGRSILEDLNRVIETYQSRVTRTIPADDLATFSATLNHIACNLRTIREEDNKI
>NZ_CP041247.1|WP_141965378.1|4578883_4579951_-|biotin/lipoyl-binding-protein
MMTPEQKFARWVRVSIAAFLAIFAWFIVADIWIPLTPDSTVMRVVTPVAPRVSGYVSQVYVHNNSQVKKGDLLYELDPTPFINKVQAAQIALAQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVSQADLDKVRTTWQTSEQAVSALNASIQNLLIQRGERDDSRNVTLQKYRNALEEAQLNLGWSKVYAETDGMVSNLQLNPGLYATAATPLLALVSNHTDIVADFREKSLRHTGVNTDAAVVFDALPGKVFPAHVTSSDAGILAGQEEVNGQLSQPEQSTRWVRDAQRMRIHVALDEPLDKPLPTGARATVQLYNSDGPFARTFAGLQIHLVSLLHYVY
>NZ_CP041247.1|WP_141965377.1|4577829_4578894_-|DUF2955-domain-containing-protein
MSINTLARVFTPHGNIVYTANDFRQTLRIAFAGMIALSISTFYDVQYGVFFVVYPLMLLSLVPVFNRHVARQFMFSAAVNCVEMVLIVGYLSQWPIVMTLVVFGLYVMRFRFMSQGPLFLLGSMGVVCQSTMLNFMSYPASNWHTLLFSNMEACVMAVALSALMNYLIPDVEPRKPPPRIEKDAARVRHESLLSGTVATLIFVVFQICDLSDSLSALMAGILILFPMHYRGAVISSLWRVVGVVLSCLYILVVQLLIYDFSNHMILMMPLIGLGLAFSARLHVMEKVGAGVGFASITTIGIMFGQNLHPDQDLIFSDLYRITSVTTSLIVTLTLVFLVHRILNCFAPTRFVITE
>NZ_CP041247.1|WP_141965376.1|4577151_4577406_+|DUF3343-domain-containing-protein
MTVYLFLFHSTAGMVRMRKAPQAAGLSFQVKDIPRQLRGGCGLCIYLRCLPGEEQQWVIPGQTEAIFHVAGDDYQLLANFPQQA
>NZ_CP041247.1|WP_141965375.1|4576155_4576395_+|DUF2164-family-protein
MSDIELSLPQRDLLCEKLRKYCETHFDLELEQFDAEFFVDFIAKELGPLFYNAGIEEAIRTHLAWSERIQEEMDLKKVY
>NZ_CP041247.1|WP_141965374.1|4574873_4576118_+|multidrug-efflux-MFS-transporter-MdtM
MLWISRLFARHSATLVFPIALILYDFSAYLTTDLIQPGIIHVVRDFNADVALAPASVSVYMAGGMALQWLLGPLSDRIGRRPVLLAGALIFTLACLATMLTTSMTQFLVARFVQGTSICFIATVGYVTVQEAFDEKRSIKLMAVITSIVLIAPIVGPLSGAALMHFVHWKVLFGIIAAMGFIAWLGLLLNMPETVRRGDVPFSAGSVVRDFRDVFRNRIFLSGAATLSLSYIPLMSWVAVSPVILMDDGGLSSGEFAWVQVPVFSAVIIANLSVARWVRDPTRPRFVLSAVPIQAIGLALLIFGNLAWPHVWLWSVLGTCFYSFGIGLIFPTLFRFTLFSNDLPKGTVSASLNIVILSVSALSIEGARWLWFHGGRLPFHMLAVVAGIAASCCLVGLLHNLRQRSEAAIEARQS
>NZ_CP041247.1|WP_141965381.1|4583823_4584267_-|FosA-family-fosfomycin-resistance-glutathione-transferase
MLSGLNHLTLAVSSLAPSVAFYQQLLGMRLHARWDSGAYLSCGDLWLCLSLDPQRRVTPPEESDYTHYAFSIAEADFAGFSARLETAGVAVWKVNRSEGASYYFLDPDGHKLELHVGSLARRLAACREQPYKGMVFYDEDPQAAGNP
>NZ_CP041247.1|WP_141965382.1|4584260_4585169_-|LysR-family-transcriptional-regulator
MINLQRLDLNLLRTLNVLLSEHNVTRAAQRLNLSQPSVSIQLARLRDIFADPLLLPGPRGMLPTARADELRGPLRDALQALELAVAPADSFDPLTAAQTWRIAATDYMASAILLPALHTLRRASPGSRLAVFDLQPSRLVQQAERDEVDLFFHTRDGAPPELHQRLLFSERYVLAGRAGHPALQASLSLAQFCQLDQVMVSPDGGGFSAATDTALANLGLSRRVVLSVPHFLFMLETLRNSDLVAVLPERLVRGVSGLMVVEPPLAVAGFDMLMLWHERWHRDPAHQWLRQQIEMSLEEKSC
>NZ_CP041247.1|WP_141965383.1|4585256_4586039_+|NAD(P)H-dependent-oxidoreductase
MKVLLIYAHPEPRSLNGALKDFAVRHLQNAGHEVQVSDLYAMRWKAGFDADDSSAPPVGEFWRSTLDSKQAFEQGTQSADIVAEQEKLLWADTVIFQFPLWWFSMPAIMKGWIDRVYAYGFAYGVGEHSDRHWGDRYGEGTLAGKRAMLVVTTGGWEEHYAPRGINGPINDILFPIQHGMLFYPGFEVLPPLVFYRTEKTDEQRFAQQCRELTQRLDTLAETSPIPFRRQNHGDYLIPSLTLRPELAVGESGLAIHRRVD
>NZ_CP041247.1|WP_167686286.1|4586230_4589032_+|transcriptional-regulator-DagR
MRRIEVVLRELERLTKTISRDDLALGTSAFTAEQIGFNLGLARNSVSKDLNQLWSDGLVIKTRGRPVFFLHLQATQTLLERPLAESEREIGAISDLLPDRNLPSISDPFALLIGHDRSLRDAVEKGKAAVLYPHGLHVLLTGPSGVGKTFFAELMHRYACEHSGDSPPPLVYFNCAEYANNPELLSSHLFGHRQGAFTGATESKTGLIEQADGGYLLLDEVHRLPYEGQEKLFSLLDKGEYRPLGASGPARSITVRLICATTEPVSSSLLRTFQRRIQVTIDLPGIRQRSLEEQIELIIGFLQRESRKIERSVSIDKTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMAAQHDVLLLDGKLADGSTNPTQEQRILVDALFNGKTLLSIDARTLPQLKSPAGGDGGIEESDLFYSFLTREYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSGTRSPRYGDQIEERVALLISYVEQILGFSLPENLVNPLRKHLLALIGYVQRGLIPQLYSSSLILDRCKDEYENATQLCRKINDLLNIQCPATEVVWLCLFLKECRHYRQRIGVSPDCGVILIAHGATTATSMAQYVNRVLERELFNAIDMPFEQSVHDTLDALIRLMQAQRWQRLILIVDIGSLVHFGSTISKLFQIDVLLMPDITLTSLLEIGLDLSYETSELPRLAALMQEKGIPSQLCTPQQENVGKVLVISCITGMGTAEKIKTVLEESFGELMSQDTRMVILDYNEVRSPERVQQAINAHERLAGIVGTFQPGLPDIPFISLEELFSEQGPELVLSLLTPDLSSAERRLEMERSASRFISALTMESIINHISVLNPQRILKEMEGVLSQLRATLAIAPSRQVTLRFLIHCCCMVERIVINRKPLQMALEMKPDMDTHAFSVIKSAFHPVEEAYAIRLSDAEYIYIYELLYS
>NZ_CP041247.1|WP_100684687.1|4589151_4589580_+|PTS-sugar-transporter-subunit-IIA
MSSTVPAHPLPQILLLTHGGWGTPLCNSLRMVTGEIEGVTEIALMPVDTLGEYYQRVEAMVKSMPEGSLILTDFIGGTTSNVAARLSADYPIAVICGLNASLLLEALDKREQGPLTGCVNELVEAGRSSCRDVVAHVNQLNH
>NZ_CP041247.1|WP_141965385.1|4589590_4590076_+|PTS-transporter-subunit-IIB
MAKIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDCFSNAGFTAAWRENQLGEGNVLVLFPSLSAIQQAVQQGFDITTIQVGGLGGGPNRKAVFQNITLDEKDVGILGELKNSGIQVFFQTIPEDKPQSLDDILKKF
>NZ_CP041247.1|WP_100684689.1|4590100_4590850_+|PTS-sugar-transporter-subunit-IIC
MDTLLFASLMGLYYWFARLRLGYTFSAMLLQPVVVAVFVGLLLGDMKTAMIIGAGMQLVYLGVTSTPGGNVPSDPALAACIAIPIAVKAGMEPNLAIALAIPFGVIGVFLDQLRRTLNAAWVHMADKHAESANMAGIMRCAFIYPALLGLLLRFPVVFAANYFGQNVVEKFLKLMPHWLTHSFEIMGGILPALGFAITIMVIGKKSLLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIKGLAKNEGAA
>NZ_CP041247.1|WP_160702579.1|4590846_4591707_+|PTS-system-mannose/fructose/sorbose-family-transporter-subunit-IID
MMSSDVMQHELVERARESRALSKADITRAWLIYWLGAEVSSSYERLQSLVFCASMTPIIKKLYPEKEEQAEALKRHLNFFNSEQTFGSVIQGISIAMEEQKTRGEPISDASITGIKTGLMGPLAGMGDSIIWAAVMPLLIAIFIPFAANGSAFGGIAPLILYPAITMAISYGLVHKGYTLGRDSIIGLLQGGRIKELIYGANVLGLIMMGALSASYVKITTPLKISALKGSDVVVQQILDSIAPGLLPLAAVFAVYFYLLKKGPRYTTILLSIVAISIVCSLTGVL
>NZ_CP041247.1|WP_141965386.1|4591710_4592820_+|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase
MNGNIYQQLGLKRVINACGKMTILGVSSVDPEVMQAATEAARAFVEIDKLTDRAGELISTHTGAEDSYLTSCASAGIAIAVAAAITRGEPDKVAQMPDSSGLANEIIILRGHNVDYGAPITSAIRLGGGRIVEVGSSNLAARWQLESAVSERTAALLFVKSHHCVQKGMLGIDDFLQVARQHNLPLIIDAAAEEDLRQWVATGADMVIYSGAKAFNAPTSGFVSGKRNWIAACKAQHNGIARAMKVGKENMVGLVYALNRYQSAAPAPDATTLRPFAEAISALRGLKADIEQDEAGRAIWRIRVRVDKEALGLNANEVEARLRGGEIAIYARRYALHQGVFSLDPRTIAEGEMPLIIARLKEITEHAAD
>NZ_CP041247.1|WP_141965387.1|4592806_4593553_+|oxo-acid-lyase
MQQINFYRRRVAINVLAKDIANAREIYDAAEGHAVIGVLSAQFSTVDEGVAEVRRWMTEIPAISVGLGAGDPAQFYKAAMISAKLHPAHVNQTFTGCGFAAGALAATGGQNTRINALISPTGRPGEVLISTGVSSAQGTPAKVSADAAVRMIQDMGAHAAKFFPMDGERSLDELKLLAQSAAQNGMTLIEPTGGIDLNNFAAILQACLQAGVAQVMPHIYSSIIDPQSGNTRPEDIRQLMSIVKDLVD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP041247_5	5.1\|4339457\|16\|NZ_CP041247\|CRISPRCasFinder	4339457-4339472	16	NZ_CP041247.1	4339496-4339511	0	1.0

1. spacer 5.1|4339457|16|NZ_CP041247|CRISPRCasFinder matches to position: 4339496-4339511, mismatch: 0, identity: 1.0

tgtcgccctgttaagc	CRISPR spacer
tgtcgccctgttaagc	Protospacer
****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041247_3	3.10\|2299608\|31\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299608-2299638	31	NZ_CP027613	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence	82124-82154	0	1.0
NZ_CP041247_3	3.10\|2299608\|31\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299608-2299638	31	MK422452	Klebsiella phage ST13-OXA48phi12.2, complete genome	8048-8078	0	1.0
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	KY271397	Klebsiella phage 3 LV-2017, complete genome	29759-29790	0	1.0
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	NZ_LR134256	Klebsiella aerogenes strain NCTC9644 plasmid 3, complete sequence	9090-9121	1	0.969
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MK714353	Klebsiella phage ST13-OXA48phi12.5, complete genome	3002-3033	1	0.969
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	KY271395	Klebsiella phage 2b LV-2017, complete genome	3142-3173	1	0.969
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	NC_004775	Enterobacteria phage epsilon15, complete genome	34257-34288	1	0.969
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	2819-2850	1	0.969
NZ_CP041247_3	3.20\|2300207\|33\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300207-2300239	33	KY271397	Klebsiella phage 3 LV-2017, complete genome	30686-30718	1	0.97
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	JF412295	EBPR podovirus 2, partial sequence	4329-4360	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	NC_023555	Edwardsiella phage eiAU-183, complete genome	14574-14605	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MT261384	Salmonella virus PAT1, complete genome	17766-17797	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	HQ824607	Edwardsiella phage eiDWF methyltransferase (eiDWFOrf6) gene, complete cds	28-59	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MT580116	Salmonella phage 65FD, complete genome	25218-25249	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	NC_042029	Edwardsiella phage eiAU, complete genome	14573-14604	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	KY271396	Klebsiella phage 2 LV-2017, complete genome	40384-40415	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MT580117	Salmonella phage 66FD, complete genome	16056-16087	2	0.938
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	HQ824659	Edwardsiella phage eiMSLS phage methyltransferase (eiMSLSOrf6) gene, complete cds	28-59	2	0.938
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	AB452988	Serratia phage KSP20 orf1 to orf6 genes for hypothetical proteins, gpFII-like protein, gpE-like protein, hypothetical protein, partial and complete cds	4286-4317	3	0.906
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	KP869108	Escherichia coli O157 typing phage 10, complete genome	3351-3382	4	0.875
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	KP869107	Escherichia coli O157 typing phage 9, partial genome	3475-3506	4	0.875
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	NC_007804	Escherichia phage phiV10, complete genome	30471-30502	4	0.875
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	CP025713	Escherichia phage YDC107_2 chromosome, complete genome	11750-11781	4	0.875
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	DQ126339	Enterobacteria phage phiV10, complete genome	30471-30502	4	0.875
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	JF412297	EBPR siphovirus 2, partial sequence	20954-20985	5	0.844
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	NC_031077	Enterobacter phage Tyrion, complete genome	32578-32609	5	0.844
NZ_CP041247_4	4.1\|2314113\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314113-2314144	32	MN095772	Stenotrophomonas phage Moby, complete genome	147526-147557	5	0.844
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	734328-734365	5	0.868
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2236438-2236469	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1213434-1213465	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1242576-1242607	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1419740-1419771	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	649714-649745	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1310-1341	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	399742-399773	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1493367-1493398	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1497245-1497276	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1671366-1671397	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1238716-1238747	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1797294-1797325	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1417479-1417510	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1245236-1245267	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	495830-495861	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1937980-1938011	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1500817-1500848	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	971513-971544	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1210474-1210505	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1425981-1426012	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1457595-1457626	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1422709-1422740	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1601825-1601856	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1615934-1615965	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1386381-1386412	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	566908-566939	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1512298-1512329	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1601792-1601823	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1476341-1476372	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1511001-1511032	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1600586-1600617	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1411757-1411788	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1476653-1476684	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1511001-1511032	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1600622-1600653	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1476341-1476372	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1411779-1411810	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1475544-1475575	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1511001-1511032	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1511001-1511032	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1511001-1511032	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1600622-1600653	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	540457-540488	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1600611-1600642	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1411779-1411810	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1418416-1418447	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1399069-1399100	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1452013-1452044	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1491203-1491234	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1508316-1508347	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1600611-1600642	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1411779-1411810	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1476652-1476683	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1483711-1483742	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1601612-1601643	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1411779-1411810	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1411779-1411810	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1600622-1600653	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1511004-1511035	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	535102-535133	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1600633-1600664	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1600434-1600465	6	0.812
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	535102-535133	6	0.812
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	848837-848868	6	0.812
NZ_CP041247_4	4.3\|2314233\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314233-2314264	32	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	53352-53383	6	0.812
NZ_CP041247_4	4.5\|2314353\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314353-2314384	32	NC_015969	UNVERIFIED_ORG: Enterobacter soli plasmid pENTAS02, complete sequence	4575-4606	6	0.812
NZ_CP041247_4	4.10\|2314653\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314653-2314684	32	MT952852	Streptomyces phage Beuffert, complete genome	25262-25293	6	0.812
NZ_CP041247_4	4.11\|2314713\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314713-2314744	32	NZ_CP025114	Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence	83128-83159	6	0.812
NZ_CP041247_3	3.14\|2299847\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299847-2299878	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	699250-699281	7	0.781
NZ_CP041247_3	3.14\|2299847\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299847-2299878	32	NZ_CP012478	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed1, complete sequence	113979-114010	7	0.781
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MT330372	Cronobacter phage JC01, complete genome	47668-47699	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	CP006582	Mesorhizobium huakuii 7653R plasmid pMHa, complete sequence	74985-75016	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	216937-216968	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP029359	Azospirillum sp. CFH 70021 plasmid unnamed4	65596-65627	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	260552-260583	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	MH910042	Mycobacterium phage Scarlett, complete genome	6533-6564	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	MH910038	Mycobacterium phage LeMond, complete genome	6533-6564	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	MH910039	Mycobacterium phage Oscar, complete genome	6534-6565	7	0.781
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	MK376955	Mycobacterium phage KiSi, complete genome	6533-6564	7	0.781
NZ_CP041247_4	4.10\|2314653\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314653-2314684	32	MK249198	Blackfly microvirus SF02 isolate 137, complete genome	1827-1858	7	0.781
NZ_CP041247_4	4.10\|2314653\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314653-2314684	32	JQ182730	Enterobacteria phage mEp237, complete genome	25393-25424	7	0.781
NZ_CP041247_4	4.10\|2314653\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314653-2314684	32	NC_019717	Enterobacteria phage HK225, complete genome	24886-24917	7	0.781
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	376931-376968	7	0.816
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	208407-208444	7	0.816
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1630891-1630922	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	195100-195131	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP044283	Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence	363684-363715	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1211028-1211059	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	255950-255981	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1638057-1638088	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1632876-1632907	8	0.75
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1632349-1632380	8	0.75
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NZ_CP012183	Pseudonocardia sp. EC080610-09 plasmid pBCI2-2, complete sequence	71606-71637	8	0.75
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	MG757166	Gordonia phage SuperSulley, complete genome	55732-55763	8	0.75
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	MF919510	Gordonia phage Kabluna, complete genome	54495-54526	8	0.75
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	MK376962	Gordonia phage NosilaM, complete genome	54809-54840	8	0.75
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	MH779499	Gordonia phage Buggaboo, complete genome	55732-55763	8	0.75
NZ_CP041247_3	3.9\|2299548\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299548-2299579	32	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1846833-1846864	8	0.75
NZ_CP041247_3	3.10\|2299608\|31\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299608-2299638	31	MN693049	Marine virus AFVG_25M114, complete genome	945-975	8	0.742
NZ_CP041247_3	3.13\|2299787\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299787-2299818	32	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	445236-445267	8	0.75
NZ_CP041247_3	3.13\|2299787\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299787-2299818	32	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	55338-55369	8	0.75
NZ_CP041247_3	3.13\|2299787\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299787-2299818	32	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	237587-237618	8	0.75
NZ_CP041247_3	3.15\|2299907\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299907-2299938	32	MN369759	Mycobacterium phage Mithril, complete genome	56083-56114	8	0.75
NZ_CP041247_3	3.19\|2300147\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300147-2300178	32	NZ_LR594668	Variovorax sp. SRS16 plasmid 3	2131-2162	8	0.75
NZ_CP041247_3	3.19\|2300147\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300147-2300178	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	258240-258271	8	0.75
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	414528-414559	8	0.75
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP032697	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence	222733-222764	8	0.75
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP048631	Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence	103732-103763	8	0.75
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	210294-210325	8	0.75
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	MH744418	Streptomyces phage JustBecause, complete genome	156401-156432	8	0.75
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	MT310898	Streptomyces phage Kela, complete genome	158134-158165	8	0.75
NZ_CP041247_4	4.14\|2314893\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314893-2314924	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1132628-1132659	8	0.75
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	MK524525	Mycobacterium phage Ringer, complete genome	17532-17563	8	0.75
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	MN234212	Mycobacterium phage Paphu, complete genome	16597-16628	8	0.75
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	NC_028828	Mycobacterium phage TheloniousMonk, complete genome	18449-18480	8	0.75
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	KY224001	Mycobacterium phage Blue, complete genome	17274-17305	8	0.75
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	422317-422354	8	0.789
NZ_CP041247_3	3.4\|2299247\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299247-2299278	32	NZ_CP041355	Pseudomonas aeruginosa strain AZPAE15042 plasmid pIHMA87, complete sequence	32723-32754	9	0.719
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP010024	Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence	36177-36208	9	0.719
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	176174-176205	9	0.719
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NC_047861	Bordetella phage vB_BbrM_PHB04, complete genome	72387-72418	9	0.719
NZ_CP041247_3	3.6\|2299367\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299367-2299398	32	MN585986	Microbacterium phage Ariadne, complete genome	25681-25712	9	0.719
NZ_CP041247_3	3.6\|2299367\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299367-2299398	32	MN586007	Microbacterium phage Smarties, complete genome	25681-25712	9	0.719
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1457053-1457084	9	0.719
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1214794-1214825	9	0.719
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	301082-301113	9	0.719
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NZ_CP011481	Hoeflea sp. IMCC20628 plasmid, complete sequence	13164-13195	9	0.719
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	996270-996301	9	0.719
NZ_CP041247_3	3.8\|2299488\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299488-2299519	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	2053713-2053744	9	0.719
NZ_CP041247_3	3.9\|2299548\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299548-2299579	32	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	421901-421932	9	0.719
NZ_CP041247_3	3.13\|2299787\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299787-2299818	32	NZ_CP015585	Roseomonas gilardii strain U14-5 plasmid 1, complete sequence	78903-78934	9	0.719
NZ_CP041247_3	3.13\|2299787\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299787-2299818	32	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	44549-44580	9	0.719
NZ_CP041247_3	3.18\|2300087\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300087-2300118	32	MK279899	Arthrobacter phage Maja, complete genome	7882-7913	9	0.719
NZ_CP041247_3	3.19\|2300147\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300147-2300178	32	KP881232	Sinorhizobium phage phiM9, complete genome	99420-99451	9	0.719
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_CP041156	Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence	113638-113669	9	0.719
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NC_019941	Thioflavicoccus mobilis 8321 plasmid pTHIMO01, complete sequence	22314-22345	9	0.719
NZ_CP041247_3	3.22\|2300328\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300328-2300359	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1719426-1719457	9	0.719
NZ_CP041247_4	4.1\|2314113\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314113-2314144	32	NZ_KP294352	Paracoccus kondratievae strain NCIMB 13773 plasmid pKON1, complete sequence	45662-45693	9	0.719
NZ_CP041247_4	4.3\|2314233\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314233-2314264	32	NZ_CP021375	Rhizobium sp. ACO-34A plasmid pRACO34Aa, complete sequence	179123-179154	9	0.719
NZ_CP041247_4	4.5\|2314353\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314353-2314384	32	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	944578-944609	9	0.719
NZ_CP041247_4	4.5\|2314353\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314353-2314384	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	133144-133175	9	0.719
NZ_CP041247_4	4.11\|2314713\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314713-2314744	32	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	147065-147096	9	0.719
NZ_CP041247_4	4.11\|2314713\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314713-2314744	32	NZ_CP022371	Bosea sp. AS-1 plasmid unnamed2, complete sequence	111373-111404	9	0.719
NZ_CP041247_4	4.11\|2314713\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314713-2314744	32	NC_009469	Acidiphilium cryptum JF-5 plasmid pACRY03, complete sequence	59901-59932	9	0.719
NZ_CP041247_4	4.14\|2314893\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314893-2314924	32	NZ_CP014310	Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence	164695-164726	9	0.719
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	355132-355169	9	0.763
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP015437	Anoxybacillus sp. B7M1 plasmid unnamed, complete sequence	36130-36161	10	0.688
NZ_CP041247_3	3.5\|2299307\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299307-2299338	32	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	743854-743885	10	0.688
NZ_CP041247_3	3.6\|2299367\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299367-2299398	32	NZ_CP015269	Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 2, complete sequence	118475-118506	10	0.688
NZ_CP041247_3	3.9\|2299548\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299548-2299579	32	NZ_CP043850	Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence	43620-43651	10	0.688
NZ_CP041247_3	3.15\|2299907\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299907-2299938	32	NZ_CP012477	Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence	522210-522241	10	0.688
NZ_CP041247_3	3.21\|2300268\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300268-2300299	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1662523-1662554	10	0.688
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	158418-158449	10	0.688
NZ_CP041247_3	3.23\|2300388\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2300388-2300419	32	NZ_CP026699	Citrobacter koseri strain AR_0025 plasmid unitig_3_pilon, complete sequence	11402-11433	10	0.688
NZ_CP041247_4	4.14\|2314893\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314893-2314924	32	NZ_CP037914	Sphingomonas sp. AAP5 plasmid p213, complete sequence	33796-33827	10	0.688
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	951245-951276	10	0.688
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	NZ_CP026518	Deinococcus sp. NW-56 plasmid unnamed2, complete sequence	123064-123095	10	0.688
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	47052-47089	10	0.737
NZ_CP041247_6	6.1\|4583677\|38\|NZ_CP041247\|CRISPRCasFinder	4583677-4583714	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	368808-368845	10	0.737
NZ_CP041247_3	3.1\|2299066\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299066-2299097	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	352264-352295	11	0.656
NZ_CP041247_3	3.2\|2299126\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2299126-2299157	32	NZ_AP017921	Thermus thermophilus strain TMY plasmid pTMY, complete sequence	15421-15452	11	0.656
NZ_CP041247_4	4.15\|2314953\|32\|NZ_CP041247\|PILER-CR,CRISPRCasFinder,CRT	2314953-2314984	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	2284319-2284350	11	0.656

1. spacer 3.10|2299608|31|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027613 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

agaagagaacgatctaacagatagatcactg	CRISPR spacer
agaagagaacgatctaacagatagatcactg	Protospacer
*******************************

2. spacer 3.10|2299608|31|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK422452 (Klebsiella phage ST13-OXA48phi12.2, complete genome) position: , mismatch: 0, identity: 1.0

agaagagaacgatctaacagatagatcactg	CRISPR spacer
agaagagaacgatctaacagatagatcactg	Protospacer
*******************************

3. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KY271397 (Klebsiella phage 3 LV-2017, complete genome) position: , mismatch: 0, identity: 1.0

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
tctcgcgccaggccatcagctcgcgcagctcc	Protospacer
********************************

4. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134256 (Klebsiella aerogenes strain NCTC9644 plasmid 3, complete sequence) position: , mismatch: 1, identity: 0.969

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacgggc	Protospacer
***.****************************

5. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK714353 (Klebsiella phage ST13-OXA48phi12.5, complete genome) position: , mismatch: 1, identity: 0.969

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacgggc	Protospacer
***.****************************

6. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KY271395 (Klebsiella phage 2b LV-2017, complete genome) position: , mismatch: 1, identity: 0.969

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacgggc	Protospacer
***.****************************

7. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 1, identity: 0.969

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacgggc	Protospacer
***.****************************

8. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 1, identity: 0.969

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacgggc	Protospacer
***.****************************

9. spacer 3.20|2300207|33|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KY271397 (Klebsiella phage 3 LV-2017, complete genome) position: , mismatch: 1, identity: 0.97

gatgaagttttccccgtcaacaaagagggtaaa	CRISPR spacer
gatgaagttttcgccgtcaacaaagagggtaaa	Protospacer
************ ********************

10. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to JF412295 (EBPR podovirus 2, partial sequence) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgggctgaaaggctggcacgggc	Protospacer
***.******* ********************

11. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_023555 (Edwardsiella phage eiAU-183, complete genome) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcaagggc	Protospacer
***.*********************** ****

12. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacggac	Protospacer
***.**************************.*

13. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to HQ824607 (Edwardsiella phage eiDWF methyltransferase (eiDWFOrf6) gene, complete cds) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcaagggc	Protospacer
***.*********************** ****

14. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacggac	Protospacer
***.**************************.*

15. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_042029 (Edwardsiella phage eiAU, complete genome) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcaagggc	Protospacer
***.*********************** ****

16. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KY271396 (Klebsiella phage 2 LV-2017, complete genome) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgggctgaaaggctggcacgggc	Protospacer
***.******* ********************

17. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcacggac	Protospacer
***.**************************.*

18. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to HQ824659 (Edwardsiella phage eiMSLS phage methyltransferase (eiMSLSOrf6) gene, complete cds) position: , mismatch: 2, identity: 0.938

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcaagggc	Protospacer
***.*********************** ****

19. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to AB452988 (Serratia phage KSP20 orf1 to orf6 genes for hypothetical proteins, gpFII-like protein, gpE-like protein, hypothetical protein, partial and complete cds) position: , mismatch: 3, identity: 0.906

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
gctggcgccatgccatcagctcgcgcagctcc	Protospacer
 ** ****** *********************

20. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KP869108 (Escherichia coli O157 typing phage 10, complete genome) position: , mismatch: 4, identity: 0.875

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
agctgattgcatggccgtggcaatgcaggctg	Protospacer
**. *********** ************** *

21. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KP869107 (Escherichia coli O157 typing phage 9, partial genome) position: , mismatch: 4, identity: 0.875

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
agctgattgcatggccgtggcaatgcaggctg	Protospacer
**. *********** ************** *

22. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_007804 (Escherichia phage phiV10, complete genome) position: , mismatch: 4, identity: 0.875

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
agctgattgcatggccgtggcaatgcaggctg	Protospacer
**. *********** ************** *

23. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP025713 (Escherichia phage YDC107_2 chromosome, complete genome) position: , mismatch: 4, identity: 0.875

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
agctgattgcatggccgtggcaatgcaggctg	Protospacer
**. *********** ************** *

24. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to DQ126339 (Enterobacteria phage phiV10, complete genome) position: , mismatch: 4, identity: 0.875

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
agctgattgcatggccgtggcaatgcaggctg	Protospacer
**. *********** ************** *

25. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to JF412297 (EBPR siphovirus 2, partial sequence) position: , mismatch: 5, identity: 0.844

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tttgcctgccgcgctgaaaggctggcagttgt	Protospacer
***.***********************   *.

26. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 5, identity: 0.844

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
tgctgattgcatggctgtggcaatgcaggctg	Protospacer
 *. *********** ************** *

27. spacer 4.1|2314113|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MN095772 (Stenotrophomonas phage Moby, complete genome) position: , mismatch: 5, identity: 0.844

cgcaaataacacgatctctgaacaggtcaaga	CRISPR spacer
cgggaatatcacgatctccgaacaggtcaagc	Protospacer
** .**** *********.************

28. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.868

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
gtccccggtggcgcttcgcttaccggggctacgggttc	Protospacer
..************* *******.*************.

29. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

-cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
gcggc-gtgccggcgatcagcgtgccgccgtcg	Protospacer
 ** * *.  ****.******************

30. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

31. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

32. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

33. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

34. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

35. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

36. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

37. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

38. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

39. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

40. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

41. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

42. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

43. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

44. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

45. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

46. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

47. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

48. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

49. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

50. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

51. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

52. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

53. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

54. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

55. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

56. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

57. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

58. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

59. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

60. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

61. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

62. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

63. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

64. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

65. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

66. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

67. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

68. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

69. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

70. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

71. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

72. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

73. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

74. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

75. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

76. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

77. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

78. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

79. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

80. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

81. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

82. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

83. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

84. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

85. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

86. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

87. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

88. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

89. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

90. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

91. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgaccgtggcgccaatcagcgtggcgccgtcg	Protospacer
** * *. *** *********** ********

92. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
tgtggagccaggccatcgcctcgcgcagctac	Protospacer
* * * ***********. *********** *

93. spacer 4.3|2314233|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 6, identity: 0.812

tggcgggcatggtcagcgctgcagatatcgtt	CRISPR spacer
tggcgcgcatggtcagcgctgcacgcatcctg	Protospacer
***** ***************** ..*** *

94. spacer 4.5|2314353|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_015969 (UNVERIFIED_ORG: Enterobacter soli plasmid pENTAS02, complete sequence) position: , mismatch: 6, identity: 0.812

acccgtgacgcggccagcggtcaggcgttcct	CRISPR spacer
acgacggacgctgccagcggtcaggcgtttct	Protospacer
**    ***** *****************.**

95. spacer 4.10|2314653|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MT952852 (Streptomyces phage Beuffert, complete genome) position: , mismatch: 6, identity: 0.812

--tggttgatgctcgcaacaaggttgaagccgcg	CRISPR spacer
attggt--atgctcgtaacaaggttcaagcctct	Protospacer
  ****  *******.********* ***** *

96. spacer 4.11|2314713|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

agtaattc--gtccgatgcctcgatgatggcgat	CRISPR spacer
--caatgcaggtctgatggctcgatgatggcgat	Protospacer
  .*** *  ***.**** ***************

97. spacer 3.14|2299847|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

-gccgtgaggttgttgaggcatgggttgatgaa	CRISPR spacer
cgccac-aatttgtgggggcatgggttgatgaa	Protospacer
 ***.. *. **** *.****************

98. spacer 3.14|2299847|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012478 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

-gccgtgaggttgttgaggcatgggttgatgaa	CRISPR spacer
cgccac-aatttgtgggggcatgggttgatgaa	Protospacer
 ***.. *. **** *.****************

99. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MT330372 (Cronobacter phage JC01, complete genome) position: , mismatch: 7, identity: 0.781

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
tgctccagccacgctgaaaggctggcacggag	Protospacer
* . ** ***.*******************.

100. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP006582 (Mesorhizobium huakuii 7653R plasmid pMHa, complete sequence) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
cctcgcgccaggccatcagcgcgccgaccact	Protospacer
.******************* ***  * * *.

101. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
cgtcggtgcaggccatcagcacgcgcagttcc	Protospacer
. ***   ************ *******.***

102. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcg----cgcagctcc	CRISPR spacer
tctcgcgccgggccatccgctcggcaccgcgg----	Protospacer
*********.******* *****    ***.*

103. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
ccccgagccaggccatcagctggcgcgggtgc	Protospacer
.*.** *************** ****.* * *

104. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MH910042 (Mycobacterium phage Scarlett, complete genome) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc-	CRISPR spacer
tctcgcgccaggcgatcagcgcgt-cagccgag	Protospacer
************* ****** **. ****.

105. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MH910038 (Mycobacterium phage LeMond, complete genome) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc-	CRISPR spacer
tctcgcgccaggcgatcagcgcgt-cagccgag	Protospacer
************* ****** **. ****.

106. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MH910039 (Mycobacterium phage Oscar, complete genome) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc-	CRISPR spacer
tctcgcgccaggcgatcagcgcgt-cagccgag	Protospacer
************* ****** **. ****.

107. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK376955 (Mycobacterium phage KiSi, complete genome) position: , mismatch: 7, identity: 0.781

tctcgcgccaggccatcagctcgcgcagctcc-	CRISPR spacer
tctcgcgccaggcgatcagcgcgt-cagccgag	Protospacer
************* ****** **. ****.

108. spacer 4.10|2314653|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK249198 (Blackfly microvirus SF02 isolate 137, complete genome) position: , mismatch: 7, identity: 0.781

tggttgatgctcgcaacaaggttgaagccgcg	CRISPR spacer
tcgcttctgctcgcaacatggatgaagccgct	Protospacer
* *.*  *********** ** *********

109. spacer 4.10|2314653|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to JQ182730 (Enterobacteria phage mEp237, complete genome) position: , mismatch: 7, identity: 0.781

tggttgatgctcgcaacaaggttgaagccgcg	CRISPR spacer
tagtggatgcacgcaacaaggttgaggaggct	Protospacer
*.** ***** **************.*  **

110. spacer 4.10|2314653|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_019717 (Enterobacteria phage HK225, complete genome) position: , mismatch: 7, identity: 0.781

tggttgatgctcgcaacaaggttgaagccgcg	CRISPR spacer
tagtggatgcacgcaacaaggttgaggaggct	Protospacer
*.** ***** **************.*  **

111. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 7, identity: 0.816

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
ctccccggtggcgctgcgcttactggggctacgtttgg	Protospacer
 .*************.*****************  *

112. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.816

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
ttccccggtggcgctacgcttaccggggctaccgatcg	Protospacer
 .*********************.******** *.*.

113. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgttgttgccggccatcagcgtgccgccgccg	Protospacer
***.. .  **** ***************.**

114. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgttgttgccggccatcagcgtgccgccgccg	Protospacer
***.. .  **** ***************.**

115. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgtcagctgcggcaatcagtttgcgctcggtt	Protospacer
*******************. ***  .** .

116. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgttgttgccggccatcagcgtgccgccgccg	Protospacer
***.. .  **** ***************.**

117. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
ccagattcgcggcatccagcgtgccgccgtcg	Protospacer
*   * ..****** .****************

118. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgttgttgccggccatcagcgtgccgccgccg	Protospacer
***.. .  **** ***************.**

119. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgttgttgccggccatcagcgtgccgccgccg	Protospacer
***.. .  **** ***************.**

120. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgttgttgccggccatcagcgtgccgccgccg	Protospacer
***.. .  **** ***************.**

121. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012183 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-2, complete sequence) position: , mismatch: 8, identity: 0.75

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
gcaacacccggatcaagcagctcgatcagctc	Protospacer
*    *************** **** **  **

122. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MG757166 (Gordonia phage SuperSulley, complete genome) position: , mismatch: 8, identity: 0.75

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
agctgacccggatgaagcagttcgcgatctgc	Protospacer
.************ ****** *** *  *  *

123. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MF919510 (Gordonia phage Kabluna, complete genome) position: , mismatch: 8, identity: 0.75

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
agctgacccggatgaagcagttcgcgatctgc	Protospacer
.************ ****** *** *  *  *

124. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK376962 (Gordonia phage NosilaM, complete genome) position: , mismatch: 8, identity: 0.75

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
agctgacccggatgaagcagttcgcgatctgc	Protospacer
.************ ****** *** *  *  *

125. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MH779499 (Gordonia phage Buggaboo, complete genome) position: , mismatch: 8, identity: 0.75

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
agctgacccggatgaagcagttcgcgatctgc	Protospacer
.************ ****** *** *  *  *

126. spacer 3.9|2299548|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.75

agtaccggggaacgcgccttctggatggtttt	CRISPR spacer
tctaccgggaagcgcgccttctggacgatcgt	Protospacer
  *******.*.*************.*.*. *

127. spacer 3.10|2299608|31|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MN693049 (Marine virus AFVG_25M114, complete genome) position: , mismatch: 8, identity: 0.742

agaagagaacgatctaacagatagatcactg	CRISPR spacer
gtcagaggacgatctaacagaaagattaatc	Protospacer
.  ****.************* ****.* *

128. spacer 3.13|2299787|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 8, identity: 0.75

acttgcgatggcgggaatctccgcgacggtaa	CRISPR spacer
gaatgcgatggcgggaaattccgcgacggcgc	Protospacer
.  ************** .**********..

129. spacer 3.13|2299787|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acttgcgatggcgggaatctccgcgacggtaa	CRISPR spacer
gaatgcgatggcgggaaattccgcgacggcgc	Protospacer
.  ************** .**********..

130. spacer 3.13|2299787|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acttgcgatggcgggaatctccgcgacggtaa	CRISPR spacer
gaatgcgatggcgggaaattccgcgacggcgc	Protospacer
.  ************** .**********..

131. spacer 3.15|2299907|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MN369759 (Mycobacterium phage Mithril, complete genome) position: , mismatch: 8, identity: 0.75

agaacaccagctgattcaggatggccgccagc	CRISPR spacer
ggcgcaccagctgcatcaggatggccgatggc	Protospacer
.* .*********  ************ ..**

132. spacer 3.19|2300147|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594668 (Variovorax sp. SRS16 plasmid 3) position: , mismatch: 8, identity: 0.75

gctggcgcatcgatgctcgagctgaacaaccg	CRISPR spacer
tccggcgcatcgatgagcgagctgaagacttg	Protospacer
 *.************  ********* * ..*

133. spacer 3.19|2300147|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.75

gctggcgcatcgatgctcgagctgaacaaccg--	CRISPR spacer
cctggcgcgtcgatggtcgagctg--tcgccgat	Protospacer
 *******.****** ********  . .***

134. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 8, identity: 0.75

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
gatagcgcccggccatcagcccgcgcagccgg	Protospacer
  * ***** **********.********.

135. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 8, identity: 0.75

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
tgtcgcgccagaccatccgctcgcgcaaacaa	Protospacer
* *********.***** *********. .

136. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048631 (Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence) position: , mismatch: 8, identity: 0.75

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
tggcgcgccaggccatctgctcgggcacgttg	Protospacer
*  ************** ***** ***  *.

137. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
caccgagccaggccatcagcttgcgcggatgc	Protospacer
. .** ***************.****.* * *

138. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MH744418 (Streptomyces phage JustBecause, complete genome) position: , mismatch: 8, identity: 0.75

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
gctcccgccagaccatcagctcgccgaccttg	Protospacer
 *** ******.************  * **.

139. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MT310898 (Streptomyces phage Kela, complete genome) position: , mismatch: 8, identity: 0.75

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
gctcccgccagaccatcagctcgccgaccttg	Protospacer
 *** ******.************  * **.

140. spacer 4.14|2314893|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

cagatccgcagcgttccgccatggttttccac	CRISPR spacer
cgctgcggcagcgttccgcgatggtgttccag	Protospacer
*.   * ************ ***** *****

141. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK524525 (Mycobacterium phage Ringer, complete genome) position: , mismatch: 8, identity: 0.75

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
agccagcagcttgtcgaacgcgcccgcgcctg	Protospacer
**  ********  **************   .

142. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MN234212 (Mycobacterium phage Paphu, complete genome) position: , mismatch: 8, identity: 0.75

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
agccagcagcttgtcgaacgcgcccgcgcctg	Protospacer
**  ********  **************   .

143. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_028828 (Mycobacterium phage TheloniousMonk, complete genome) position: , mismatch: 8, identity: 0.75

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
agccagcagcttgtcgaacgcgcccgcgcctg	Protospacer
**  ********  **************   .

144. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KY224001 (Mycobacterium phage Blue, complete genome) position: , mismatch: 8, identity: 0.75

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
agccagcagcttgtcgaacgcgcccgcgcctg	Protospacer
**  ********  **************   .

145. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 8, identity: 0.789

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
aagcccggtggcgctacgcttaccgggcctacgtgggg	Protospacer
*  ********************.*** ***** *

146. spacer 3.4|2299247|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041355 (Pseudomonas aeruginosa strain AZPAE15042 plasmid pIHMA87, complete sequence) position: , mismatch: 9, identity: 0.719

tttacccaccccagtaaagccgggaatagctg	CRISPR spacer
attacccaccacagtagagccgggggtgatta	Protospacer
 ********* *****.*******..*...*.

147. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010024 (Paraburkholderia fungorum strain ATCC BAA-463 plasmid pBIL, complete sequence) position: , mismatch: 9, identity: 0.719

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
cgcgcttcgcggcaatcagcgtcgcgccgtcc	Protospacer
**.   ..**************  *******

148. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 9, identity: 0.719

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
ggcgtggatcggcaatcagcgcggcgccgtcg	Protospacer
 *.  *   ************.* ********

149. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_047861 (Bordetella phage vB_BbrM_PHB04, complete genome) position: , mismatch: 9, identity: 0.719

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
gcttggctgcggccatcagcgcgccgccagct	Protospacer
  *..******** *******.******. *

150. spacer 3.6|2299367|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MN585986 (Microbacterium phage Ariadne, complete genome) position: , mismatch: 9, identity: 0.719

gtacgggcgggtcgcccagaactcggctgcag	CRISPR spacer
tcaggggggcgtcgcccagaactcggcgaacg	Protospacer
 .* *** * ***************** .  *

151. spacer 3.6|2299367|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MN586007 (Microbacterium phage Smarties, complete genome) position: , mismatch: 9, identity: 0.719

gtacgggcgggtcgcccagaactcggctgcag	CRISPR spacer
tcaggggggcgtcgcccagaactcggcgaacg	Protospacer
 .* *** * ***************** .  *

152. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
atcagaccaggatcaagcaggccgagcgtgtt	Protospacer
. * **** ************.*****...*.

153. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
atcagaccaggatcaagcaggccgagcgtgtt	Protospacer
. * **** ************.*****...*.

154. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.719

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
cgctggcccggatcgagcaggtcgccaatctg	Protospacer
 ****.********.*********   *. *

155. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011481 (Hoeflea sp. IMCC20628 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
ggctgagccggatcaagcatgtccggattgta	Protospacer
****** ************ *** .*  ..*

156. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
atcagaccaggatcaagcaggccgagcgtgtt	Protospacer
. * **** ************.*****...*.

157. spacer 3.8|2299488|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggctgacccggatcaagcaggtcgagcacatc	CRISPR spacer
atcagaccaggatcaagcaggccgagcgtgtt	Protospacer
. * **** ************.*****...*.

158. spacer 3.9|2299548|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

agtaccggggaacgcgccttctggatggtttt	CRISPR spacer
tctaccgggaagcgcgccttctggacgatcgc	Protospacer
  *******.*.*************.*.*. .

159. spacer 3.13|2299787|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

acttgcgatggcgggaatctccgcgacggtaa	CRISPR spacer
tatggcgatggcggcaatatccgcgactggct	Protospacer
  * ********** *** ******** *

160. spacer 3.13|2299787|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

acttgcgatggcgggaatctccgcgacggtaa	CRISPR spacer
tatggcgatggcggcaatgtccgcgactggct	Protospacer
  * ********** *** ******** *

161. spacer 3.18|2300087|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to MK279899 (Arthrobacter phage Maja, complete genome) position: , mismatch: 9, identity: 0.719

tttacctgccgcgctgaaaggctggcacgggc	CRISPR spacer
atcaagggccgcgctgaagcgctggcacggca	Protospacer
 *.*   ***********. **********

162. spacer 3.19|2300147|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to KP881232 (Sinorhizobium phage phiM9, complete genome) position: , mismatch: 9, identity: 0.719

gctggcgcatcgatgctcgagctgaacaaccg	CRISPR spacer
tcatcgaaatcgatgcacgagttgaacaaccg	Protospacer
 *    . ******** ****.**********

163. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041156 (Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
cgacctggcaggccaccggctcgcgcagctcg	Protospacer
.  * .* *******.*.*************

164. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_019941 (Thioflavicoccus mobilis 8321 plasmid pTHIMO01, complete sequence) position: , mismatch: 9, identity: 0.719

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
tctcgcgccaggccagcaggtcgttcttgcgc	Protospacer
*************** *** ***. *   . *

165. spacer 3.22|2300328|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ataccgtggcggttgaacgcgtgcaggaagtc	CRISPR spacer
cgctggaggcggttgatcgcgtccaggaaggc	Protospacer
   . * ********* ***** ******* *

166. spacer 4.1|2314113|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP294352 (Paracoccus kondratievae strain NCIMB 13773 plasmid pKON1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaaataacacgatctctgaacaggtcaaga	CRISPR spacer
cgtgctgaactcgatctcggaacaggtcaatg	Protospacer
**..   *** ******* *********** .

167. spacer 4.3|2314233|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021375 (Rhizobium sp. ACO-34A plasmid pRACO34Aa, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgggcatggtcagcgctgcagatatcgtt	CRISPR spacer
ccgcggccatcgtcagcgctgcagagcgcatc	Protospacer
. **** *** **************   *.*.

168. spacer 4.5|2314353|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 9, identity: 0.719

acccgtgacgcggccagcggtcaggcgttcct	CRISPR spacer
accggtgacgcggccggcggtcagatcggcga	Protospacer
*** ***********.********..   *

169. spacer 4.5|2314353|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 9, identity: 0.719

acccgtgacgcggccagcggtcaggcgttcct	CRISPR spacer
gtccgtgacgccgccagcgggcaggggccgat	Protospacer
..********* ******** **** *..  *

170. spacer 4.11|2314713|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 9, identity: 0.719

agtaattcgtccgatgcctcgatgatggcgat	CRISPR spacer
ttcagtgcggccgatgcctcgatgatcgcgca	Protospacer
  .*.* ** **************** ***

171. spacer 4.11|2314713|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022371 (Bosea sp. AS-1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

agtaattcgtccgatgcctcgatgatggcgat	CRISPR spacer
gggcgatagtccgccgcctcgatgatggcgag	Protospacer
.*  . * ***** .****************

172. spacer 4.11|2314713|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_009469 (Acidiphilium cryptum JF-5 plasmid pACRY03, complete sequence) position: , mismatch: 9, identity: 0.719

agtaattcgtccgatgcctcgatgatggcgat	CRISPR spacer
ttcagtgcggccgatgcctcgatgatcgcgca	Protospacer
  .*.* ** **************** ***

173. spacer 4.14|2314893|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

---cagatccgcagcgttccgccatggttttccac	CRISPR spacer
ttccaagc---gagcgttcggccatggctttccac	Protospacer
   **...    ******* *******.*******

174. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.763

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
ttgcccggtggcgctacgcttaccgggcctacggtaag	Protospacer
 . ********************.*** ******

175. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015437 (Anoxybacillus sp. B7M1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
ttttctctgcggcaatcaacgtgctgccgctt	Protospacer
. *.  ************.*****.****..

176. spacer 3.5|2299307|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

cgtcagctgcggcaatcagcgtgccgccgtcg	CRISPR spacer
tcacgctgccggaaatcggcgtgccgccgtcg	Protospacer
.  *. .  *** ****.**************

177. spacer 3.6|2299367|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015269 (Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 2, complete sequence) position: , mismatch: 10, identity: 0.688

gtacgggcgggtcgcccagaactcggctgcag	CRISPR spacer
gctgttgcgggtcgccgagagctcggctgacc	Protospacer
*.    ********** ***.********

178. spacer 3.9|2299548|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043850 (Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agtaccggggaacgcgccttctggatggtttt	CRISPR spacer
cccgtcggggaacgcgcctactggctggccgt	Protospacer
  ...************** **** ***.. *

179. spacer 3.15|2299907|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

agaacacca----gctgattcaggatggccgccagc	CRISPR spacer
----tctcgtcgcgctttttcaggatggccgccagc	Protospacer
    . .*.    ***  ******************

180. spacer 3.21|2300268|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.688

tctcgcgccaggccatcagctcgcgcagctcc	CRISPR spacer
catcgcgcccggccatcaggtcgcgtgtcatt	Protospacer
. ******* ********* *****.. * ..

181. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 10, identity: 0.688

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
gtcagcttgcttggcagtggcaatgcgctggc	Protospacer
. .** **** ***************.   *

182. spacer 3.23|2300388|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026699 (Citrobacter koseri strain AR_0025 plasmid unitig_3_pilon, complete sequence) position: , mismatch: 10, identity: 0.688

agtagattgcatggcagtggcaatgcaggcgg	CRISPR spacer
aacggattgcatggctgtggcaaagcacaata	Protospacer
*...*********** ******* *** .  .

183. spacer 4.14|2314893|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037914 (Sphingomonas sp. AAP5 plasmid p213, complete sequence) position: , mismatch: 10, identity: 0.688

cagatccgcagcgttccgccatggttttccac	CRISPR spacer
gagatccgcagccttccgccgtggtgccttcg	Protospacer
 *********** *******.**** ....

184. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
caccggcagcttcacgtacgcccccgcgggca	Protospacer
 .  .*********** **** ******.. *

185. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026518 (Deinococcus sp. NW-56 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
gttgcccagcttctcgaacacgcccgcgatcg	Protospacer
.  *  ******* *****.*********  .

186. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.737

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
ctccccggtggcgctgcgcttaccggggctacaatggc	Protospacer
 .*************.*******.********..   .

187. spacer 6.1|4583677|38|NZ_CP041247|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 10, identity: 0.737

acccccggtggcgctacgcttactggggctacgggttt	CRISPR spacer
ctccccggtgacgctacgcttaccggggctacaaaaca	Protospacer
 .********.************.********... .

188. spacer 3.1|2299066|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 11, identity: 0.656

tgctgatatcgcattatcaattttgtcttcga	CRISPR spacer
aatatttattgctttatcaattttgtctttat	Protospacer
 ..   ***.** ****************..

189. spacer 3.2|2299126|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017921 (Thermus thermophilus strain TMY plasmid pTMY, complete sequence) position: , mismatch: 11, identity: 0.656

tataacccggtggtggcagagctggattttat	CRISPR spacer
gcgaacccggaggtggccgagctggaagagga	Protospacer
   ******* ****** ********    .

190. spacer 4.15|2314953|32|NZ_CP041247|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 11, identity: 0.656

agagagcagcttcacgaacgcgcccgcgaaaa	CRISPR spacer
gtcgagcagcttcacgaatgcgtccgttccgg	Protospacer
.  ***************.***.***.   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1131897 : 1150282

Enterobacteria_phage(71.43%)

integrase,plate,capsid

attL 1137915:1137928|attR 1151626:1151639

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_141963816.1\|1131897_1133682_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_141963817.1\|1133678_1134713_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_141963819.1\|1135231_1137565_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	85.2
WP_001472077.1\|1137579_1137900_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_141963821.1\|1137896_1138124_-	hypothetical protein	NA	NA	NA	NA
1137915:1137928	attL	NA	NA	NA	NA
WP_141963823.1\|1138120_1138672_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.6e-29	59.3
WP_000556587.1\|1138668_1138935_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_167686263.1\|1139039_1139168_+	hypothetical protein	NA	NA	NA	NA
WP_167686221.1\|1139475_1140219_+\|capsid	capsid protein	NA	NA	NA	NA
WP_000468231.1\|1140222_1140462_+	hypothetical protein	Q7M294	Enterobacteria_phage	2.4e-19	59.3
WP_141963829.1\|1140477_1141044_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_162623967.1\|1141328_1142885_+	hypothetical protein	NA	NA	NA	NA
WP_141963833.1\|1143014_1144001_-	hypothetical protein	NA	NA	NA	NA
WP_000124713.1\|1144160_1145348_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.8e-108	50.6
WP_141963835.1\|1145828_1146674_+	hypothetical protein	NA	NA	NA	NA
WP_137474826.1\|1146954_1147161_+	AlpA family transcriptional regulator	A0A0R6PGY4	Moraxella_phage	8.5e-05	41.1
WP_141963837.1\|1147180_1147495_+	hypothetical protein	NA	NA	NA	NA
WP_141963839.1\|1147776_1148979_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_141963841.1\|1148971_1150282_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1151626:1151639	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1298156 : 1319949

Morganella_phage(38.46%)

holin,tail,integrase

attL 1297909:1297935|attR 1318097:1318123

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1297909:1297935	attL	NA	NA	NA	NA
WP_141963941.1\|1298156_1299419_+\|integrase	tyrosine-type recombinase/integrase	A0A1W6JPG6	Morganella_phage	2.9e-148	60.0
WP_032421644.1\|1299415_1300066_+	hypothetical protein	NA	NA	NA	NA
WP_087808184.1\|1300621_1300837_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_141963943.1\|1300836_1301268_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	9.1e-25	47.5
WP_141963945.1\|1301281_1301872_+	antirepressor protein	A0A1W6JPH8	Morganella_phage	1.3e-58	61.3
WP_087825907.1\|1301871_1302051_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_141963947.1\|1302047_1303010_+	HAD family hydrolase	A0A1C9IHV9	Salmonella_phage	7.0e-17	53.4
WP_141963949.1\|1303006_1303324_+	ubiquinol-cytochrome C reductase	NA	NA	NA	NA
WP_141963951.1\|1303320_1303584_+\|holin	nicotinic acetylcholine receptor subunit beta	NA	NA	NA	NA
WP_029602623.1\|1303580_1303802_+	hypothetical protein	NA	NA	NA	NA
WP_141963953.1\|1303798_1304428_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	5.7e-28	37.1
WP_064371072.1\|1304437_1304788_+	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.4e-39	70.9
WP_141963955.1\|1304780_1307543_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-290	56.7
WP_142255852.1\|1307882_1308329_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_167686264.1\|1308309_1308693_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_004213172.1\|1308697_1309171_+	hypothetical protein	NA	NA	NA	NA
WP_004213173.1\|1309354_1309525_+	hypothetical protein	NA	NA	NA	NA
WP_004213174.1\|1309524_1309851_+	hypothetical protein	NA	NA	NA	NA
WP_141963957.1\|1309858_1312924_+\|tail	tail protein (tape measure)	B1GS57	Salmonella_phage	3.5e-94	40.4
WP_029602632.1\|1313466_1313838_+	hypothetical protein	F1C5E3	Cronobacter_phage	5.2e-29	52.1
WP_032752615.1\|1314768_1315197_-	hypothetical protein	A0A1W6JPI4	Morganella_phage	4.6e-45	65.7
WP_141963961.1\|1315608_1316640_+	Abi family protein	A0A059NT88	Lactococcus_phage	1.5e-17	25.1
WP_141963963.1\|1316881_1317997_+\|integrase	tyrosine-type recombinase/integrase	U5P434	Shigella_phage	8.7e-128	58.7
WP_141963965.1\|1318167_1319949_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.8e-17	30.8
1318097:1318123	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2324320 : 2333925

Enterobacteria_phage(50.0%)

integrase

attL 2319478:2319490|attR 2330296:2330308

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2319478:2319490	attL	NA	NA	NA	NA
WP_100683653.1\|2324320_2325346_-	HTH-type transcriptional repressor PurR	C6ZCU4	Enterobacteria_phage	6.9e-31	31.3
WP_004862736.1\|2325641_2325731_+	YnhF family membrane protein	NA	NA	NA	NA
WP_141964477.1\|2325894_2327058_+	MFS transporter	NA	NA	NA	NA
WP_141964478.1\|2327100_2327682_-	superoxide dismutase [Fe]	NA	NA	NA	NA
WP_141964479.1\|2328099_2328978_-	NlpC/P60 family protein	A0A217EQL1	Bacillus_phage	1.4e-16	38.7
WP_131047991.1\|2329165_2329582_-\|integrase	tyrosine-type recombinase/integrase	A0A1V0E5M7	Salmonella_phage	8.7e-41	59.1
WP_160704758.1\|2329578_2329710_-	hypothetical protein	K7PHK0	Enterobacteria_phage	1.6e-09	79.4
WP_141964480.1\|2329687_2329906_-	excisionase	Q77WA4	Escherichia_phage	4.9e-19	68.6
WP_131048035.1\|2329968_2330094_-	DUF4060 family protein	K7PHF4	Enterobacteria_phage	1.2e-06	74.4
WP_131048036.1\|2330312_2330651_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.8e-44	78.5
2330296:2330308	attR	NA	NA	NA	NA
WP_100683657.1\|2331273_2332530_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_141964481.1\|2332693_2332966_+	hypothetical protein	NA	NA	NA	NA
WP_100683659.1\|2333027_2333291_+	immunity protein	NA	NA	NA	NA
WP_141964482.1\|2333505_2333925_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	5.5e-27	43.4

DBSCAN-SWA_4

3177588 : 3215635

Salmonella_phage(36.36%)

portal,transposase,protease,coat,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_141964153.1\|3177588_3178263_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	8.9e-11	31.6
WP_141964154.1\|3178259_3178607_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.0
WP_141964155.1\|3178626_3180183_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.8e-162	55.5
WP_100684903.1\|3181067_3182318_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	4.4e-19	90.7
WP_131050549.1\|3182551_3183202_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_100684901.1\|3183222_3183681_+	NUDIX hydrolase	NA	NA	NA	NA
WP_141964882.1\|3183737_3184844_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_100684899.1\|3184904_3185546_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_131050550.1\|3185549_3186920_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.6e-107	44.6
WP_032688316.1\|3187343_3188018_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_100684897.1\|3188014_3189481_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_141964883.1\|3189605_3190727_+	cupin domain-containing protein	NA	NA	NA	NA
WP_131050553.1\|3190790_3192020_-	peptidase T	NA	NA	NA	NA
WP_131050554.1\|3192294_3193413_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	4.4e-31	35.1
WP_141964884.1\|3193396_3194260_+	spermidine/putrescine ABC transporter permease PotB	NA	NA	NA	NA
WP_141964885.1\|3194493_3194733_-	hypothetical protein	K7P7N3	Enterobacteria_phage	3.7e-20	60.8
WP_141964886.1\|3195147_3197388_-	hypothetical protein	Q9AYY6	Salmonella_phage	2.8e-32	55.8
WP_141964887.1\|3197525_3197780_+	Arc family DNA-binding protein	A0A088CPT2	Enterobacteria_phage	1.2e-21	66.3
WP_141964888.1\|3197852_3198383_-	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	4.5e-82	86.3
WP_141964889.1\|3198598_3199045_+	hypothetical protein	NA	NA	NA	NA
WP_141964890.1\|3199062_3201777_-	transglycosylase SLT domain-containing protein	A0A088CQ71	Enterobacteria_phage	4.7e-212	51.6
WP_141964891.1\|3201776_3203111_-	phage DNA ejection protein	I6RSG0	Salmonella_phage	3.9e-66	47.4
WP_141964892.1\|3203120_3203816_-	DNA transfer protein	A5VW66	Enterobacteria_phage	9.1e-67	63.2
WP_141964893.1\|3203818_3204277_-	DUF2824 family protein	A0A192Y6V9	Salmonella_phage	4.6e-75	84.1
WP_141964894.1\|3204273_3205107_-\|tail	phage tail protein	A0A192Y6T9	Salmonella_phage	2.7e-41	62.9
WP_141964895.1\|3205103_3206531_-	hypothetical protein	A0A075B8I2	Enterobacteria_phage	2.1e-203	69.5
WP_141964896.1\|3206490_3206994_-	hypothetical protein	I1TEJ0	Salmonella_phage	2.5e-74	83.8
WP_141964897.1\|3207400_3208690_-\|coat	coat protein	Q76H21	Enterobacteria_phage	2.7e-189	76.0
WP_141964898.1\|3208689_3209589_-	scaffolding protein	A0A192Y6T4	Salmonella_phage	1.4e-112	73.3
WP_141964899.1\|3209603_3211775_-\|portal	portal protein	A0A2H4FNE2	Salmonella_phage	0.0e+00	82.3
WP_141964900.1\|3211774_3213223_-	DNA packaging protein	Q2A0C1	Sodalis_phage	6.9e-202	69.1
WP_142255914.1\|3213191_3213638_-	DNA packaging protein	A0A2K8HN72	Pseudomonas_phage	2.6e-27	48.3
WP_141964901.1\|3213985_3214573_+	hypothetical protein	NA	NA	NA	NA
WP_167686240.1\|3214757_3214928_+	hypothetical protein	NA	NA	NA	NA
WP_141964902.1\|3215074_3215635_+\|protease	Clp protease	NA	NA	NA	NA

DBSCAN-SWA_5

4205506 : 4215175

Enterobacteria_phage(100.0%)

integrase

attL 4204640:4204656|attR 4237122:4237138

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4204640:4204656	attL	NA	NA	NA	NA
WP_095094204.1\|4205506_4206682_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	4.1e-144	61.7
WP_141965255.1\|4206733_4208719_-	DNA mismatch repair protein	NA	NA	NA	NA
WP_167686284.1\|4209116_4209266_-	hypothetical protein	NA	NA	NA	NA
WP_141965256.1\|4209337_4209904_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	5.1e-60	64.9
WP_002889919.1\|4209922_4210168_-	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_141965257.1\|4210164_4210902_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.2e-69	58.6
WP_004132554.1\|4211472_4211739_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_141965258.1\|4211735_4212287_+	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.2e-26	64.8
WP_064152985.1\|4212283_4212511_+	hypothetical protein	NA	NA	NA	NA
WP_141965259.1\|4212507_4212828_+	DUF5375 family protein	NA	NA	NA	NA
WP_141965260.1\|4212841_4215175_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.5
4237122:4237138	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP041249

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041249_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041249_1

1795-1877

Unclear

Consensus_repeat	Method
AAGATTTCGCATGCGAAATCTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041249_1

>merge|NZ_CP041249|1|1795-1877|CRISPRCasFinder
AAGATTTCGCATGCGAAATCTGGCTATTCAGGTGACGATTTCTGAAGGGTTGATATGACCAAGATTTCGCATGCGAAATCTTG

>NZ_CP041249|1|1|1795-1877|CRISPRCasFinder
AAGATTTCGCATGCGAAATCTGG	CTATTCAGGTGACGATTTCTGAAGGGTTGATATGACC
AAGATTTCGCATGCGAAATCTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041249.1\|WP_048757064.1\|8485_8749_+\|DNA-polymerase-III-subunit-theta	unknown	unknown	gnl\|CDD\|368909
NZ_CP041249.1\|WP_064343513.1\|8777_9098_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041249.1\|WP_048756093.1\|1887_3162_-\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|179607
NZ_CP041249.1\|WP_032743916.1\|3161_3587_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP041249.1\|WP_064343512.1\|5393_5813_+\|DUF1380-domain-containing-protein	unknown	unknown	gnl\|CDD\|369222
NZ_CP041249.1\|WP_048756096.1\|3795_4026_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041249.1\|WP_048756098.1\|4461_5163_+\|methylase	unknown	unknown	gnl\|CDD\|184255
NZ_CP041249.1\|WP_048757065.1\|7544_8051_+\|antirestriction-protein	unknown	unknown	gnl\|CDD\|227077
NZ_CP041249.1\|WP_048756099.1\|5162_5384_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041249.1\|WP_000761848.1\|8093_8285_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041249.1\|WP_048756089.1\|1031_1469_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041249.1\|WP_048756093.1\|1887_3162_-\|Y-family-DNA-polymerase	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	0
NZ_CP041249.1\|WP_032743916.1\|3161_3587_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	2.07925e-53
NZ_CP041249.1\|WP_064343512.1\|5393_5813_+\|DUF1380-domain-containing-protein	gnl\|CDD\|369222	pfam07128, DUF1380, Protein of unknown function (DUF1380). This family consists of several hypothetical bacterial proteins of around 140 residues in length. Members of this family seem to be specific to Enterobacteria. The function of this family is unknown.	6.6814e-65
NZ_CP041249.1\|WP_048756098.1\|4461_5163_+\|methylase	gnl\|CDD\|184255	PRK13699, PRK13699, putative methylase; Provisional.	3.83066e-151
NZ_CP041249.1\|WP_048757064.1\|8485_8749_+\|DNA-polymerase-III-subunit-theta	gnl\|CDD\|368909	pfam06440, DNA_pol3_theta, DNA polymerase III, theta subunit. DNA polymerase III (EC 2.7.7.7) is comprised of three tightly associated subunits, alpha, epsilon and theta. This family contains the theta subunit. The structure of the theta subunit shows that the N-terminal two thirds is comprised of three helices while the C-terminal third is disordered. The function of the theta subunit is poorly understood, but the interaction of the theta subunit with the epsilon subunit is thought to enhance the 3' to 5' exonucleolytic proofreading activity of epsilon.	1.13393e-32
NZ_CP041249.1\|WP_048757065.1\|7544_8051_+\|antirestriction-protein	gnl\|CDD\|227077	COG4734, ArdA, Antirestriction protein [General function prediction only].	1.2513e-41

>NZ_CP041249.1|WP_048756089.1|1031_1469_+|hypothetical-protein
MKSTPFTEMATAFRGQIVRHWALRYPGTQSEAATALTEAAINLGYVTRSRPVPGAALLSWASNPAETPLWAAQTALTLMLSIGWKPESNQDWCGMSALIFRANRTLPLEQLVASLPDSIDRQTATGWFVAAIEEDSSYRYNRKSR
>NZ_CP041249.1|WP_048756093.1|1887_3162_-|Y-family-DNA-polymerase
MFALADVNSFYASCEKVFRPDLRGKPVVVLSNNDGCVIARSKEAKLLGIKMGVPWFQLKDAQFPEKLHVFSSNYELYASMSARVMTHLEELAPRVEQYSIDEMFLDIRGINSCIDFEDFGRQLRVHVGNGTGLTIGVGMGPTKTLAKSAQWASKEWPQFGGVLALTPGNPRRTEKLLSLQPVEEIWGVGRRISKTLGTMGITTALQLARANPTFIRKNFNVVLERTVRELNGEPCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAICQHAERAAEKLRGEHQYCRHISAFIKTSPFAINEPYYGNLATEKLMTPTRDTRDIITAAVRALDRIWVSGHRYAKAGIMLNDFSPTGVSQLNLFDDVQPRAHSEELMKVLDGINHSGLGKVWFAGRGIAPEWQMKREMLSPAYTTRWDDLPVAMIR
>NZ_CP041249.1|WP_032743916.1|3161_3587_-|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MKFIAASLEPGVMTLPLFTERCAAGFPSPAADYTEAELDLNEYCIRHRASTYFVRAIGNSMTDIGLNSGDLMVVDKAEKPVHGDIVIAEMEGEFTVKRLLLTPRPVLQPMNPAYPALHPDPETLQIFGVVTAFIHKTRGAD
>NZ_CP041249.1|WP_048756096.1|3795_4026_+|hypothetical-protein
MSPAFRNVLRFAGVPVDSSEPVRRQYGSRMIGIVTVCLLPLLVFDVPLWVFVLSQVIWGAGVYIGLSVAGDKSRNR
>NZ_CP041249.1|WP_048756098.1|4461_5163_+|methylase
MSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRSGRAIAGDVTDEWLAPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKTYASNRRNAKDRRGFVNYCHEGAYVLAKGRPVPPLRPLPDVMPFPYTGNPLHPNQKPVEALQPLIESFSAPGAIILDPFAGSASTCVAAYRAGRRYIGIEMLAQYHRAGAERLVAMRRAVNTPAANDEWLPEAA
>NZ_CP041249.1|WP_048756099.1|5162_5384_+|hypothetical-protein
MNYSGHEALRRDMAGLANNLCDLKTTLKVLEETYHYRHDGLAERLAGISLRRLSVLMDEAFNIALMLDESFLD
>NZ_CP041249.1|WP_064343512.1|5393_5813_+|DUF1380-domain-containing-protein
MYGTREDLCRMLSEQYPAETTLNLIIWSPADIEALADGMDYTVSELDIWTILARLDDIPEEQRLESGVSASAVMTLIDEVKAAATEVRVPADLLETLLMTAEQALWHREWTARDGNHPVPESVKRRLADTAKVRALMKI
>NZ_CP041249.1|WP_048757065.1|7544_8051_+|antirestriction-protein
MNSSITVPAVYVGTYHQYNCGSIFGKWFDLTDFDDEDAFYDACRTLHAGEEDPELMFQDIEGIPSQFASESSVKWAFIEAFRQAQDDGRPAAFVAWAEYTGECDYDAFDDAYYGEAESEEDFAYGFVEDNGLLNEVPESLRMYFDYEAYARDLFSSGYVLHDGYVFRN
>NZ_CP041249.1|WP_000761848.1|8093_8285_+|hypothetical-protein
MKLAPQSREILRQYKALINARRRDAGQRELTTAQVMDEICYYMTCQCAVYIGGHFILQGGKGQ
>NZ_CP041249.1|WP_048757064.1|8485_8749_+|DNA-polymerase-III-subunit-theta
MSKWNIASFSKDEQDKVSVDKAAAAVAWQERMNKPVVHELVEREQPEHLREYFRERLRVHRINSQQLPRANAPEYQKPEDGGSESKP
>NZ_CP041249.1|WP_064343513.1|8777_9098_+|hypothetical-protein
MRMSVLFALTCLFSAFNLVFMPFHPVMMLWAFGLSAAFVIVNIIADRLRLWSGIAWGIAAAVIVVSMLNGAQPDEENRVLISSFACLVSAWYAGVQFRKEKRESLS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041249_1	1.1\|1818\|37\|NZ_CP041249\|CRISPRCasFinder	1818-1854	37	NZ_CP041249	Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence	1818-1854	0	1.0
NZ_CP041249_1	1.1\|1818\|37\|NZ_CP041249\|CRISPRCasFinder	1818-1854	37	NZ_CP024509	Klebsiella pneumoniae strain KSB2_1B plasmid unnamed3, complete sequence	80246-80282	1	0.973
NZ_CP041249_1	1.1\|1818\|37\|NZ_CP041249\|CRISPRCasFinder	1818-1854	37	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	40859-40895	3	0.919

1. spacer 1.1|1818|37|NZ_CP041249|CRISPRCasFinder matches to NZ_CP041249 (Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctattcaggtgacgatttctgaagggttgatatgacc	CRISPR spacer
ctattcaggtgacgatttctgaagggttgatatgacc	Protospacer
*************************************

2. spacer 1.1|1818|37|NZ_CP041249|CRISPRCasFinder matches to NZ_CP024509 (Klebsiella pneumoniae strain KSB2_1B plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.973

ctattcaggtgacgatttctgaagggttgatatgacc-	CRISPR spacer
ctattcaggtgacgatttctgaaggg-tgatatgacca	Protospacer
************************** **********

3. spacer 1.1|1818|37|NZ_CP041249|CRISPRCasFinder matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 3, identity: 0.919

ctattcaggtgacgatttctgaagggttgatatgacc	CRISPR spacer
ctattcaggtgacgatttcttaagggtagatatgaca	Protospacer
******************** ****** ********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7544 : 15477

Stx2-converting_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048757065.1\|7544_8051_+	antirestriction protein	G9FHQ1	Rhodococcus_virus	1.5e-07	32.4
WP_000761848.1\|8093_8285_+	hypothetical protein	NA	NA	NA	NA
WP_048757064.1\|8485_8749_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.0e-14	53.8
WP_064343513.1\|8777_9098_+	hypothetical protein	NA	NA	NA	NA
WP_141964155.1\|9273_10830_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.8e-162	55.5
WP_141964154.1\|10849_11197_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	72.0
WP_141964153.1\|11193_11868_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	8.9e-11	31.6
WP_064343514.1\|12573_13110_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	5.9e-50	73.2
WP_076752086.1\|13159_13408_+	DUF905 family protein	NA	NA	NA	NA
WP_048757533.1\|13476_15477_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	3.0e-22	27.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041250

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041248

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP041247

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP041249

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection