CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041025	Emcibacter congregatus strain ZYLT chromosome, complete genome	1 crisprs	csa3,DEDDh,cas3,cas2,cas1,cas9,WYL,DinG	0	15	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041025_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041025_1

2753423-2755636

TypeII

Consensus_repeat	Method
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CRISPRCasFinder
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CRT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	PILER-CR

33 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP041025_1

>merge|NZ_CP041025|1|2753423-2755636|CRISPRCasFinder,CRT,PILER-CR
GCCATAGCTTCCATTCCGACACGGTTATGCTATGATTCAAGGGTGGTGACCGGTAGGGCCTCTGTGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATCTGGCCGTTGAAGCAGAACAGCGTGAAGCCGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGGATATGCAATTCTCCGCTTGGAATATCGGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGATTTTTCATTCCCTTTAAAGCCTTTTTGGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTGTTCAAGAGTTAAGTTTTGCTCTAACGAAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTTTAACTCTCTGGATTGGAAAGTCGTTTATGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTTAATGTTTTCAATGGCAGGGTGTCCCACGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGTCGATGTGCTTCAGGACAGAATTAAAGACGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGGCCAATATGCGGATCTGATGCCGAAAGAAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTGATCATATGCGATTGTTTGAATATGTTCAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTTTTTTCTTGACAGTATGCCTTATACATTAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGGTATTACGTCGCGGCTATATCTGGGCCGTGCCATAGCTTCCATTCCGACACGGTTATGCTATGATCGCGTAATCGATAAGGCTTATCGCAAGAGCGCCATAGCTTCCATTCCGACACGGTTATGCTATGATAAAGGAAATATTCGCCGTGCTGGGCTATTAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATATACAGCAGGGCACAAGTTATAACCGTGGGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTCCGACCCCTTGAAACCGCAACCGTAAACAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGATTGCCCGCCCATTTTGACCATCTCGTAGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTCGGGGTCGTCGCATAACAATCACCATAATGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTCACGCGGGCGGCGGGGTAATGGACGGCGAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTGAAAAACTTTGAATATATCTACTATCAAGGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTAAGTGCATATTGTCATGAAGCGTGCGGCCGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGCGGTTTTGATCCGCAGTGCGCGCCGCCGAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTGTGTTGTTCTTTACAACACACCCTTCACTGCCATAGCTTCCATTCCGACACGGTTATGCTATGATGAAGAAAAGCATGTTTCACATGATCGGCGTGCCATAGCTTCCATTCCGACACGGTTATGCTATGATAGCAATTTATTATATGAGGGGATAAGTAACGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTATTGACATAATCATTATCATGATATTCTTGCCATAGCTTCCATTCCGACACGGTTATGCTATGATAAAAATAATACATCATTTGATATGTAAAGCGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTTCGCTTTCATACATTTCATAACCAAAACAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTACACCGGTAAACGAATGTTGCGCCGTCGAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTGTCTGTAGCATCTGTGACCTTATCCACAAGCCATAGCTTCCATTCCGACACGGTTATGCTATGATCACGAAACGGGAACCCATTTAAACCTCGACGCCATAGCTTCCATTCCGACACGGTTATGCTATGATAGCCCCACCAGAGAGGTAAACGGTGGACGTGCCATAGCTTCCATTCCGACACGGTTATGCTATGATTGTTATACCGTCCGGGGATGTCATAACTCTGCCATAGCTTCCATTCCGACACGGTTATGCTATGAT

>NZ_CP041025|1|1|2753423-2755636|CRISPRCasFinder
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCAAGGGTGGTGACCGGTAGGGCCTCTGTG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CTGGCCGTTGAAGCAGAACAGCGTGAAGCC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GGATATGCAATTCTCCGCTTGGAATATCGG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GATTTTTCATTCCCTTTAAAGCCTTTTTGG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTTCAAGAGTTAAGTTTTGCTCTAACGAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTTAACTCTCTGGATTGGAAAGTCGTTTAT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTAATGTTTTCAATGGCAGGGTGTCCCACG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GTCGATGTGCTTCAGGACAGAATTAAAGAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GGCCAATATGCGGATCTGATGCCGAAAGAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGATCATATGCGATTGTTTGAATATGTTCA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTTTTTCTTGACAGTATGCCTTATACATTA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GGTATTACGTCGCGGCTATATCTGGGCCGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CGCGTAATCGATAAGGCTTATCGCAAGAGC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AAAGGAAATATTCGCCGTGCTGGGCTATTA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	ATACAGCAGGGCACAAGTTATAACCGTGGG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCCGACCCCTTGAAACCGCAACCGTAAACA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GATTGCCCGCCCATTTTGACCATCTCGTAG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCGGGGTCGTCGCATAACAATCACCATAAT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCACGCGGGCGGCGGGGTAATGGACGGCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGAAAAACTTTGAATATATCTACTATCAAG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TAAGTGCATATTGTCATGAAGCGTGCGGCC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GCGGTTTTGATCCGCAGTGCGCGCCGCCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTGTTGTTCTTTACAACACACCCTTCACT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GAAGAAAAGCATGTTTCACATGATCGGCGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AGCAATTTATTATATGAGGGGATAAGTAAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TATTGACATAATCATTATCATGATATTCTT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AAAAATAATACATCATTTGATATGTAAAGC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTCGCTTTCATACATTTCATAACCAAAACA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TACACCGGTAAACGAATGTTGCGCCGTCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTCTGTAGCATCTGTGACCTTATCCACAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CACGAAACGGGAACCCATTTAAACCTCGAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AGCCCCACCAGAGAGGTAAACGGTGGACGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTTATACCGTCCGGGGATGTCATAACTCT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT

>NZ_CP041025|1|1|2753423-2755636|CRT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCAAGGGTGGTGACCGGTAGGGCCTCTGTG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CTGGCCGTTGAAGCAGAACAGCGTGAAGCC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GGATATGCAATTCTCCGCTTGGAATATCGG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GATTTTTCATTCCCTTTAAAGCCTTTTTGG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTTCAAGAGTTAAGTTTTGCTCTAACGAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTTAACTCTCTGGATTGGAAAGTCGTTTAT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTAATGTTTTCAATGGCAGGGTGTCCCACG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GTCGATGTGCTTCAGGACAGAATTAAAGAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GGCCAATATGCGGATCTGATGCCGAAAGAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGATCATATGCGATTGTTTGAATATGTTCA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTTTTTCTTGACAGTATGCCTTATACATTA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GGTATTACGTCGCGGCTATATCTGGGCCGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CGCGTAATCGATAAGGCTTATCGCAAGAGC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AAAGGAAATATTCGCCGTGCTGGGCTATTA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	ATACAGCAGGGCACAAGTTATAACCGTGGG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCCGACCCCTTGAAACCGCAACCGTAAACA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GATTGCCCGCCCATTTTGACCATCTCGTAG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCGGGGTCGTCGCATAACAATCACCATAAT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TCACGCGGGCGGCGGGGTAATGGACGGCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGAAAAACTTTGAATATATCTACTATCAAG
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TAAGTGCATATTGTCATGAAGCGTGCGGCC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GCGGTTTTGATCCGCAGTGCGCGCCGCCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTGTTGTTCTTTACAACACACCCTTCACT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GAAGAAAAGCATGTTTCACATGATCGGCGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AGCAATTTATTATATGAGGGGATAAGTAAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TATTGACATAATCATTATCATGATATTCTT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AAAAATAATACATCATTTGATATGTAAAGC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTCGCTTTCATACATTTCATAACCAAAACA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TACACCGGTAAACGAATGTTGCGCCGTCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTCTGTAGCATCTGTGACCTTATCCACAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CACGAAACGGGAACCCATTTAAACCTCGAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AGCCCCACCAGAGAGGTAAACGGTGGACGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTTATACCGTCCGGGGATGTCATAACTCT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT

>NZ_CP041025|1|1|2754875-2755636|PILER-CR
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTGTTGTTCTTTACAACACACCCTTCACT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	GAAGAAAAGCATGTTTCACATGATCGGCGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AGCAATTTATTATATGAGGGGATAAGTAAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TATTGACATAATCATTATCATGATATTCTT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AAAAATAATACATCATTTGATATGTAAAGC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TTCGCTTTCATACATTTCATAACCAAAACA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TACACCGGTAAACGAATGTTGCGCCGTCGA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTCTGTAGCATCTGTGACCTTATCCACAA
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	CACGAAACGGGAACCCATTTAAACCTCGAC
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	AGCCCCACCAGAGAGGTAAACGGTGGACGT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT	TGTTATACCGTCCGGGGATGTCATAACTCT
GCCATAGCTTCCATTCCGACACGGTTATGCTATGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041025.1\|WP_099472358.1\|2745275_2746166_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP041025.1\|WP_099472345.1\|2764689_2764914_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP041025.1\|WP_133118557.1\|2748981_2750076_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380502
NZ_CP041025.1\|WP_099472360.1\|2741743_2742814_-\|glycosidase	unknown	unknown	gnl\|CDD\|350124
NZ_CP041025.1\|WP_099472343.1\|2766921_2767137_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041025.1\|WP_133118558.1\|2742803_2744420_-\|glucohydrolase	unknown	unknown	gnl\|CDD\|200472
NZ_CP041025.1\|WP_099472357.1\|2746168_2747467_-\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP041025.1\|WP_099472354.1\|2750080_2751238_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP041025.1\|WP_099472365.1\|2744430_2745216_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP041025.1\|WP_099472347.1\|2763063_2763285_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377800
NZ_CP041025.1\|WP_099472352.1\|2755682_2756012_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP041025.1\|WP_099472350.1\|2756870_2760005_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP041025.1\|WP_133118556.1\|2762752_2763061_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041025.1\|WP_099472361.1\|2740774_2741710_-\|DUF1861-family-protein	unknown	unknown	gnl\|CDD\|378102
NZ_CP041025.1\|WP_099472346.1\|2763585_2764470_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP041025.1\|WP_099472353.1\|2751496_2753140_+\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234679
NZ_CP041025.1\|WP_099472356.1\|2747474_2748734_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224250
NZ_CP041025.1\|WP_099472349.1\|2761639_2762446_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041025.1\|WP_099472344.1\|2765313_2766600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041025.1\|WP_099472351.1\|2756008_2756965_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694

Protein	Function_ID	Function_description	E-value
NZ_CP041025.1\|WP_099472358.1\|2745275_2746166_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.14605e-55
NZ_CP041025.1\|WP_099472345.1\|2764689_2764914_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.24082e-06
NZ_CP041025.1\|WP_133118557.1\|2748981_2750076_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380502	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria. This group includes the ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria. This group belongs to the LacI-GalR family repressors and are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding.	3.7325e-94
NZ_CP041025.1\|WP_099472360.1\|2741743_2742814_-\|glycosidase	gnl\|CDD\|350124	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase. This subfamily contains the glycosyl hydrolase family 130 (GH130), as classified by the carbohydrate-active enzymes database (CAZY), enzymes that are phosphorylases and hydrolases for beta-mannosides, and includes Listeria innocua beta-1,2-mannobiose phosphorylase (Lin0857). hey possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. Structure of Lin0857 shows beta-1,2-mannotriose bound in a U-shape, interacting with a phosphate analog at both ends. Lin0857 has a unique dimer structure connected by a loop, with a significant open-close loop displacement observed for substrate entry. A long loop, which is exclusively present in Lin0857, covers the active site to limit the pocket size.	4.78088e-148
NZ_CP041025.1\|WP_133118558.1\|2742803_2744420_-\|glucohydrolase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.79758e-174
NZ_CP041025.1\|WP_099472357.1\|2746168_2747467_-\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	5.55788e-41
NZ_CP041025.1\|WP_099472354.1\|2750080_2751238_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	8.85477e-173
NZ_CP041025.1\|WP_099472365.1\|2744430_2745216_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.42058e-65
NZ_CP041025.1\|WP_099472347.1\|2763063_2763285_-\|hypothetical-protein	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	3.15911e-06
NZ_CP041025.1\|WP_099472352.1\|2755682_2756012_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.16889e-36
NZ_CP041025.1\|WP_099472350.1\|2756870_2760005_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	3.52999e-180
NZ_CP041025.1\|WP_099472361.1\|2740774_2741710_-\|DUF1861-family-protein	gnl\|CDD\|378102	pfam08950, DUF1861, Protein of unknown function (DUF1861). This hypothetical protein, found in bacteria and in the eukaryote Leishmania, has no known function.	1.4789e-146
NZ_CP041025.1\|WP_099472346.1\|2763585_2764470_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	6.4933e-20
NZ_CP041025.1\|WP_099472353.1\|2751496_2753140_+\|glucose-6-phosphate-isomerase	gnl\|CDD\|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP041025.1\|WP_099472356.1\|2747474_2748734_-\|hypothetical-protein	gnl\|CDD\|224250	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones].	0.00176502
NZ_CP041025.1\|WP_099472351.1\|2756008_2756965_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.90146e-102

>NZ_CP041025.1|WP_099472353.1|2751496_2753140_+|glucose-6-phosphate-isomerase
MNTQTTSWRLLDRLRRDGTGLRLNDLFANDPARFEKYALQVENILFDYSKNLVTDDIMAGLFDLAREVDVEGWRDRMFSGDRINVTEDRPVLHVALRNISARPILVDGIDVMEQVSEELDKMKRLTDAVRSGKWRGYSGKPITDVVNIGIGGSNLGPQMVTEALQKYSDNRIRVHYVSNVDGVQIAQVLRPLNPEQVLFVISSKTFTTRETLTNAETARNWLLASSFEETALEKHFIAVTANRNNALKFGLPQENIHDLWDWVGGRFSLWSAIGLPIALSLGFEHFESLLGGAYAMDRHFEMAPMEQNAPVIQALIGIWNSTFLGMQSQAILPYNQSLHMFSAYLQQADMESNGKSVDWDGNDVPYSTGSIIWGQLGINGQHAFYQYLHQGKNIVPADFIGAVESSTSVRGHHEYLMANFIAQTQALMTGIDETQVRAELRAKGKSEAYINNLVSHKIHQGNRPTNTILMERIDPHTLGALIALYEHKIFVQGIIWKVCSFDQWGVELGKELAHRILPQLDQNGTVEPQDSSTTGLIDFYKNVRKKS
>NZ_CP041025.1|WP_099472354.1|2750080_2751238_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MANLTIKDLVKTYIEDEIIHDINFDIQSGEFIVLVGPSGCGKSTILRMIAGLEEVTSGQIFIDDVDVTNTAPSKRGVAMVFQSYALYPHMTVRENLSFGLKNMKLDKAYIDQHITHVADILQLSEYLDRLPSHLSGGQRQRVAIGRTIVRDPKIFLFDEPLSNLDTELRVQMRHELSKLHKKLKSTMIYVTHDQIEAMTLADRIVVLDQGRISQMGTPLELYNHPKNIFTASFIGSPKINLLDGKVMDSQHGKTLVNLDGGINICLNKHYPLIEVGDTITLGLRPEHIHAHLKSGDVILEVQPHAIENLGDSTYVYAKLQNHSDIRVKLQGQNTFNSQNVITLGINPNDILLFDQKGDAIIPSGTAHPAPSEDLENSSSMRQKVS
>NZ_CP041025.1|WP_133118557.1|2748981_2750076_+|LacI-family-transcriptional-regulator
MSHEKGFYNDMARKKETLKSIAANLGITHTSVSNAFINPSKVSVKLRKKILDYAKSVNYHGPNPAARSLRTGLCGAIGIIYNDQLSYAFSDPHDIAFLRGVSTVCEERGTNIVLIPLKNSDLDNFESLDAMVDGYILNAPYKSNPTTQRALSRGLPTVVVDFESPQHISVLTNDASVMQEMTSHITSLGHRKIGIITFPLKEGSQALFSLEREPETENYVVNQRLQGCRAALLNEDIELSNILVQEITNSRKGGAEAAQILMNAVPDITALICFSDQLAYGAMEECRRRKIDLPGRISITGFDGITPYDLSPELPALTTVRQDADQKGRKAAEALLNKASVKSNQIDIQAEVIIKDSTAKVWNL
>NZ_CP041025.1|WP_099472356.1|2747474_2748734_-|hypothetical-protein
MRNITTAFFLVLSVFVCVSGGAHSAGLSHSQKTIFEPLQFNLDHFNHLYAPLEINGTKMAVVNIYSEYPDYHFAIEPAEGFACVDDVARAIVMLAGYLKTHPNKAILKKMKMLIEFILYMQNDNGYFNNFIWHDLSINTGYKTSVAEMNWWSFRALWSLEVAYGLVSSDVDLVNRIAASIDRLMVNLKRDLPLGEQIAEIKNTIWVASWLPQKFAADQAAVAIMGLLPHYVRQKDGRVLDMINALAKGIMQMQKGGKGVYPYGMFLSWENEWHAWGNSQAYALLLAGQQLKHPEYIESALREVDYFYPYLLKNGLVESLSIRRDEAGYSEIHKRHFPQIAYGIRPMVYAAAEAYQATQDKKYLVLQAKLTSWFTGDNIARRAMYDQATGRTYDAINSAVKINMNSGAESTIEGLLVLQK
>NZ_CP041025.1|WP_099472357.1|2746168_2747467_-|carbohydrate-ABC-transporter-substrate-binding-protein
MTFMKKISHIIVIFSSLLVGGCSGSDQKAKAAPEGKVIRLWVAPDESQEAFWKVVVARWNESGLGMPVAFETIPAVESSEKAILTALVAGNAPDISTNIFSGFATQLVALGQLQDLSVMAGYPELIAHRRMEKIIQGWDQGGKKYVFPLYSNPTLIWWRMDILQKLGIDDVPRTYDDVYKLSEKYAALDQKYGMQLITGKNWYDRWYDFISLYYAASGGAPYITDGKASYDNAAGLSVLTFMETIFKREWTALDFESDDPLTTGLVVGGVRGPWSIPFFERLYPQTLEKIVVGPMIVLREGQGKTFTFADSKGLVLFKNSKVKEEAFAFLSWVLSQDEYSLLWLEKTSLPPARGDLMENAIFRAFYDTHPLARQYAAYVDVALPSAFIENTIDVQKTMGYEMVEPVKFGTKAPKDALADAVRRTNKLLDTVN
>NZ_CP041025.1|WP_099472358.1|2745275_2746166_-|sugar-ABC-transporter-permease
MRLGRIKLGEFNEAQIGAALAASFLLFNVIFWAYPFVWLVILSFSDWRFFDVPTFSGARNIVAVLGDLEFWRSLWNVMRFLIYYVPIVLACSLAFAFGLKHIGRGKVFIALCFLLAHISSGVAYSLVFEKIFSSTGPLNSFLLEWFGFTIPWLSSPTMAMLSISLVVTWKFVGYYGLILYSGLAAIPPEIYDAAKLDNTKPLKRLFRITLPMINAQLVMVLVFAITVAFGIFTEPYMMTGGGPMESTNMPMLVIYETAFNRLQPGRAALMAIIIAIISYAVLKLMRKVLEKNVELV
>NZ_CP041025.1|WP_099472365.1|2744430_2745216_-|carbohydrate-ABC-transporter-permease
MYGLALTWLYPYIWMIMASLKPTPEIYHTDLFSGSFTLENYQFLFESAEKLNRPFLKSLFNSFFVTLTVTASVVMTSAFIGYAMAKIDFRGRRQMNDFILFQMVVPGMMLIIPQFILIKQLGLINSYSAMILPVLMSGWGIFMVAQTFRGTPNDYIDAAKLDRASLKQIILNVMLPLNKAIVAIVALFTFTGTWDNFMWPLIVISDVDKMPLSVLLATFSKQYGIYVGPVMAGSVLQALPLIILFITFRRYFLQGMSLSLK
>NZ_CP041025.1|WP_133118558.1|2742803_2744420_-|glucohydrolase
MISTSNQTWWQDTVFYEIYISSFQDGNGDGIGDFAGLTSRLGYLQDLGVNGLWITPFYPSPKVDNGYDVADYFDVDPDFGTLADFDHFIEEAHRRGMKVIIDVVLNHVSTDHAWFREAASDPKSKYRDYFFFQDAPNGWSSFFGGSAWSKEPDGSQVYYHKFAPEQADLNWQNQAVRDDMKAMLRFWLDKGVDGFRFDVINFLSCDGIGAENPVDEQGKQIHLNDIDQLGIYPCVRELCGFVREYAAQKKTAYFLVGEVGDEALAKLAPYQGPDMLDVVFNFNLGSIDSFDICRVYQELKDMEKHLSGLPTIFFNSHDMARSMSRLCHENQAAAAALAALTLMAKGVSFLYFGEEIGMSNFIPGNIEEMKDIQAINHFNLAVSEGKNQRQAYGDALEKCRDKSRSYMSWNKSDFSGFSRSKPWIGAANVVHSPNVEDQRNDPESLWHWYQKLIFLCRDNPALAFGNYDHLSLDEKLLHLSRRWDDHIVHIHINFSREKKLIDRQNFREILTSRGISPCEPDYLPPFGVLITREIENAY
>NZ_CP041025.1|WP_099472360.1|2741743_2742814_-|glycosidase
MLIKRSEFNPLITPAMVKPSKAGFKVDGTFNAGVIDYNGETVMLLRVAESVITSDNNEIRIPFLTEVAGACEMTIKSFRRDDETYDFSDPRMIALKANPKKGYLTSLSHIRLARSQDGVNFVVEDEAFIFPDNRYELFGCEDPRVTQIEGVYYINYSSVSGLGITTSLARTSNFRDVEKLGLIFAPDNRDVCLFPEKIQGYYWALHRPAPMHLGTPEIWISKSPDLLHWGDHTVLAECSDSEWDKLKIGGGAPMLKTSKGWLQIYHGVDETQRYCMGAFLTDIDDPTKVIARMNGPLVEPWAPYETDGFFGNVVFSCGALIKNEVLHIYYGAADEVMALATISLDALWGHLFPKGL
>NZ_CP041025.1|WP_099472361.1|2740774_2741710_-|DUF1861-family-protein
MSEKETKRVKELVSEFRQDQKKNVFKTAKLKFSGVDGHDVYNITAPFRSANRTVIAGRVEPRDHEYSNVVFFEETDGTWAPIAGAPVYNLQDPFITYIRNELVFGGVQIKDVEKGLEWRTVLFRGPDIFNLVECFIGPAGMKDIRLCDLQNGKIAVFTRPQGEIGGRGKIGYVDIDNLEGLTIAVIESATLLHGMFHPMDWGGVNEAHLLTNGEIGVLAHAACYENDHLMQERHYYAKSFIFNPVLKEFRDYKIIASRDQFEAGPAKRADLANVIFSSGLIRIDGKATLYAGVSDAESHWIEIDDPFMVKE
>NZ_CP041025.1|WP_099472352.1|2755682_2756012_-|CRISPR-associated-endonuclease-Cas2
MSAAKDRFMWLFVFYDLPTSTKPERKTASRFRNYLLKDGYMMIQYSVYARICNGQDRVEKHLRRLDGILPSDGSVRVLKITDKQYERMKILVGTHKNNEKTKTEQLVLF
>NZ_CP041025.1|WP_099472351.1|2756008_2756965_-|type-II-CRISPR-associated-endonuclease-Cas1
MQSIILVTNIKFVRRQGLAWRTILIQNPAKLRLVKGQLQLENEGGKHSLPLEDIIALVLESPQISLNASLLSYAQDQGVAIITCDKSHMPNGVMLPFHAHSRQSRVAYIQQSCTKALKKRLWQRVIQAKIINQAVCLQGAGGEVKRLITLANQVKSGDPDNLEAQAARYYWTRLMGKSFKRGNNDLVNAALNYGYAIIRAYVARSQVAYGLMPTFGLHHANELNSFNLTDDLMEVLRPFVDHYVFEMQAEGLFREGESLPIECRQHLAGAGAWLCDLEGETHSLANTCDKMAAGLVCAMENNSPALLPLTEFKIGKLG
>NZ_CP041025.1|WP_099472350.1|2756870_2760005_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MSYNLGVDIGIASVGFAGVNLNAQNILCSGVHIFEAAENPKTGASLAEPRRTKRGMRRVFGRRSQRKRAVRRMLIEYGIDNIDAIDVQDKRHNNEKLIKKSPWDLRKESLERILTDAEFSRVLFHIAKRRGYQSNRKGAIANDTEGKKALSGAVQLQEAMVQSGAETVGAYLATLDKKRNGHGSYDNFVTRDLLRQEVRKIFAAQRRYGNIKASRELEHAFAGNGEADKKYTLEGSGIAFCQRDLQSSIGMVGYCTLEPSEKRAPKFSYSAELFILWSKLNNAKIRDTKSNERVLSQDEKNKLTDLAHKNKSGVSFKQARKILNLSDDMRFNMSYRKINDRDDTWEKVRDRAEKSVWLILTGYQTLKSKMATGSDDDWQQWTGPRRNSLDEISHILSFYESEQEIRDLLAPLELQEDQISSLLTITNFSRTIDLSLKVVRAILPFMQKGLTYDKACREAGYNHSQKENKGLTKIPSFKDVRNPVVNRALAQTRKVMNAVIAQYGMPETIIIEMARDVGRSFKERKDKERDQKTNQSYREAAKKHAAEILDIDPDNVRGGDIIKYRLWKEQKGFCPYSGVYINHQMMRDPVATQIDHIIPYSRSWNDSYMNKILCCTDENQMKANNTPVEYFQKQGRNLKTLSAFAKGLPKPKADNLLIENFDEEKANKWKDRALNDTRYIAKLLKNHVEQSLGLGIGNRVQARNGALTSHLRSAWGFPDKNRRNDTHHAIDAIVLACSTQSMVQNLTRWNKYEARRKNPHKRALPPKPWESFIQDTKDAVEHIFVSRMPVRKVTGPAHQDTIRSIRKDDGKIIQRIKVADLKPDMLERMVHKERNIRLYTVLKKRLDAHKGDPKKAFATPIFMPTNDPGKQGPLINAVRIETIEKSGVLINGGLASNGDMVRVDVFRKNGKFFLVPIYVHHFVGGTLPNRAIIAYKPEGEWEEMEDKDFIFSLCKNDLLFIKSKKDEYFGYYGGTDISTGAIGITAHNRDPSFGKKGDGKDRTGVKTLQSFEKYTVDYFGNKYKVRKETRLGVAHNSHPEPCKT
>NZ_CP041025.1|WP_099472349.1|2761639_2762446_-|hypothetical-protein
MRSIKNNKTRLGPLLIVLSIFFSGNSAFAKENLNCLFSEQAKFVEACKAVRADFLELTQNSRGLSKESKHEKLEKLFRDLKQIEDYGSIEAYLVLISQSAYYLEQYDVAESKAIEALSYKHRSSNPDATHMGWAILTGVYAAQGKILSSQEALKNAKKGLTCADKPHICAYVLKEKGVLEIAMQNYGAANSDFDKAASMFWKKADSYKAGLIYYTAAEFLVTRSAENAIINYMKAKDLYCSMEQERVCELYSSMIDVKVRRLKENKGK
>NZ_CP041025.1|WP_133118556.1|2762752_2763061_-|hypothetical-protein
MTTTTEILQWREYQIELRYDPDPYHQAARNGVAMAHLEIRCLRPARAALPISETGYRSVFMPDCYLKDYDSAADYVTQWLECAAQTREWQDSLDQARQLSLF
>NZ_CP041025.1|WP_099472347.1|2763063_2763285_-|hypothetical-protein
MGDILDRLDELSLFEGDAESYVLEFVEDRGLLDGLPENLQPYFDTEAFARDMLLGGDIEEVAIMGRRFVVWGC
>NZ_CP041025.1|WP_099472346.1|2763585_2764470_+|alpha/beta-hydrolase
MKSIFLVSTLFLISLITSSSSIANIGYISPNFYMKEVSYGYNLKQKLDIYVPNFSNMEQSVKLRPVIIYVRGGSWKFGDKDSAKKHGKFYADKNNVFITINYRLSSNAQHPAQVEDIATAIKWVHKNITKYKGDPENITLIGYSSGAHLISLIATDEKYLAAHDLNFSILKLVIPVDTIAYDLPYAAASSPKSVTELIYNNFGESKKQLEQASPLFHANQTTAPPPPFIVYASNRRPGAAKEARLFVYALEKAGSRSKYIILNHISNKNMNTLISGSNNPIAVDILMKLSQTTR
>NZ_CP041025.1|WP_099472345.1|2764689_2764914_-|helix-turn-helix-transcriptional-regulator
MITGMQVRLGRTALRLSVRDLATKTGLTANTINRFENGSDAKGSTIQKLQSYLETSGVEFIAENGGGVGVRLKK
>NZ_CP041025.1|WP_099472344.1|2765313_2766600_+|hypothetical-protein
MKFSYTHLPEQIQNDLTHIAACLIRRTIPSPATRDRYTPSRVRHIILHGCFTEDHWTPDSILHPGESAYSYNLMVIVSAHLGDILAALENAVAELNQSGKISFPVQLRFADTKGRIDQKLRNGYLAYDRIQERGIVLYSRGKITRDLFLLPPRPEAAAHLEQARKYYDHAFPLAQLLLSGARAFATLDRSAAALMLNLAAAEGYAALMAVHILAYPPGHPLQDLRALAESLHPELAMIWTGRRGELIFDHLASAFREVRFSADYQVIPPDLEAMFGHVEDLHTLVRHICQHKFTALKAGRLAKPDKDGLEVVRDALRPSDDAIYGIAEEEAPLHISPPKVFSPQTEETPADTNFTAALRGLENSCSELKTIGDILISLTDITAGRASSCEFALMGQFLQERTRKVEDIHEQMTSSLDPALAAQAAPAA
>NZ_CP041025.1|WP_099472343.1|2766921_2767137_+|hypothetical-protein
MNRKPPVPPQSANDNAVQKTAAPALRHIAQLLGRLAARDSLQRHLRKSAANDNQATSTEGTEVKQTRPPRP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	648544-648573	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	607778-607807	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	523998-524027	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	535468-535497	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	522758-522787	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	563557-563586	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	519942-519971	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	549866-549895	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	536672-536701	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	534364-534393	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	535468-535497	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	549866-549895	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	519942-519971	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	521897-521926	6	0.8
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	381655-381684	6	0.8
NZ_CP041025_1	1.14\|2754317\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754317-2754346	30	CP031731	Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete sequence	29350-29379	6	0.8
NZ_CP041025_1	1.19\|2754647\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754647-2754676	30	NC_026598	Mycobacterium phage Milly, complete genome	46292-46321	6	0.8
NZ_CP041025_1	1.19\|2754647\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754647-2754676	30	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	445624-445653	6	0.8
NZ_CP041025_1	1.19\|2754647\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754647-2754676	30	NZ_CP019193	Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence	177422-177451	6	0.8
NZ_CP041025_1	1.19\|2754647\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754647-2754676	30	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	93819-93848	6	0.8
NZ_CP041025_1	1.19\|2754647\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754647-2754676	30	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	332587-332616	6	0.8
NZ_CP041025_1	1.26\|2755109\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755109-2755138	30	NZ_CP024449	Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence	26848-26877	6	0.8
NZ_CP041025_1	1.1\|2753459\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753459-2753488	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1448098-1448127	7	0.767
NZ_CP041025_1	1.1\|2753459\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753459-2753488	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	365164-365193	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	682775-682804	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	1052464-1052493	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	683966-683995	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP021029	Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence	251028-251057	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	246571-246600	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	246565-246594	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	808498-808527	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	879153-879182	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NC_013697	Deftia phage phiW-14, complete genome	77215-77244	7	0.767
NZ_CP041025_1	1.20\|2754713\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754713-2754742	30	NZ_CP017832	Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence	50098-50127	7	0.767
NZ_CP041025_1	1.22\|2754845\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754845-2754874	30	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	166990-167019	7	0.767
NZ_CP041025_1	1.26\|2755109\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755109-2755138	30	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	123667-123696	7	0.767
NZ_CP041025_1	1.26\|2755109\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755109-2755138	30	MK250029	Prevotella phage Lak-C1, complete genome	69912-69941	7	0.767
NZ_CP041025_1	1.26\|2755109\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755109-2755138	30	MK250016	Prevotella phage Lak-A1, complete genome	92124-92153	7	0.767
NZ_CP041025_1	1.26\|2755109\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755109-2755138	30	MK250019	Prevotella phage Lak-A2, complete genome	15007-15036	7	0.767
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	143259-143288	7	0.767
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	NZ_LT222313	Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T1, complete sequence	30167-30196	7	0.767
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	NZ_LT963398	Pseudomonas cerasi isolate PL963 plasmid PP3, complete sequence	15337-15366	7	0.767
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	685621-685650	8	0.733
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	728919-728948	8	0.733
NZ_CP041025_1	1.7\|2753855\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753855-2753884	30	NZ_AP019656	Vibrio panuliri strain JCM 19500 plasmid pVPan1, complete sequence	29197-29226	8	0.733
NZ_CP041025_1	1.11\|2754119\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754119-2754148	30	MN035556	Leviviridae sp. isolate H2_Rhizo_33_scaffold_597 RNA-dependent RNA polymerase (H2Rhizo33597_000001), hypothetical protein (H2Rhizo33597_000002), and hypothetical protein (H2Rhizo33597_000003) genes, complete cds	2607-2636	8	0.733
NZ_CP041025_1	1.16\|2754449\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754449-2754478	30	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	499872-499901	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MF370225	Salmonella phage ST11, complete genome	77836-77865	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	NC_005282	Enterobacteria phage Felix 01, complete genome	81718-81747	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MG251392	Salmonella virus VSe102, complete genome	82023-82052	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	JF461087	Salmonella phage FO1a, complete genome	81616-81645	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	NC_041922	Salmonella phage Si3, complete genome	59339-59368	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MK965970	Salmonella phage DaR-2019b isolate 6717_4FA, complete genome	52810-52839	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MG251391	Salmonella virus VSe11, complete genome	82018-82047	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MG969405	UNVERIFIED: Salmonella phage GE_vB_B1, complete genome	40456-40485	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	AF320576	Bacteriophage Felix 01, complete genome	81718-81747	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	JX181814	Salmonella phage SBA-1781, partial genome	4665-4694	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MK965969	Salmonella phage DaR-2019a isolate 6712_28b, complete genome	53508-53537	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	KX377933	Escherichia phage vB_EcoM_Alf5, complete genome	83423-83452	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MG969406	UNVERIFIED: Salmonella phage GE_vB_B3, complete genome	67952-67981	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	NC_027337	Escherichia phage vB_EcoM-VpaE1, complete genome	84045-84074	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MG969414	UNVERIFIED: Salmonella phage GE_vB_NS7, complete genome	21762-21791	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MN850631	Escherichia phage mio, complete genome	20651-20680	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	MN850619	Escherichia phage finno, complete genome	38679-38708	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	JX181823	Salmonella phage SPT-1, partial genome	18631-18660	8	0.733
NZ_CP041025_1	1.23\|2754911\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2754911-2754940	30	KP143762	Salmonella phage Mushroom, complete genome	6697-6726	8	0.733
NZ_CP041025_1	1.25\|2755043\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755043-2755072	30	NZ_CP028885	Borrelia turcica IST7 plasmid lp129, complete sequence	100722-100751	8	0.733
NZ_CP041025_1	1.25\|2755043\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755043-2755072	30	NZ_CP028885	Borrelia turcica IST7 plasmid lp129, complete sequence	102985-103014	8	0.733
NZ_CP041025_1	1.25\|2755043\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755043-2755072	30	NZ_CP028885	Borrelia turcica IST7 plasmid lp129, complete sequence	104087-104116	8	0.733
NZ_CP041025_1	1.26\|2755109\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755109-2755138	30	MT375529	Pelagibacter phage Kolga EXVC01, complete genome	11625-11654	8	0.733
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	MN694047	Marine virus AFVG_250M130, complete genome	51000-51029	8	0.733
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	MN693600	Marine virus AFVG_25M483, complete genome	18934-18963	8	0.733
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	MN694132	Marine virus AFVG_250M1196, complete genome	10182-10211	8	0.733
NZ_CP041025_1	1.2\|2753525\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2753525-2753554	30	NC_015693	Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequence	29767-29796	9	0.7
NZ_CP041025_1	1.13\|2754251\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754251-2754280	30	MN393079	Salmonella virus VSiA, complete genome	6269-6298	9	0.7
NZ_CP041025_1	1.13\|2754251\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754251-2754280	30	MH424444	Salmonella virus VSiP, complete genome	6389-6418	9	0.7
NZ_CP041025_1	1.20\|2754713\|30\|NZ_CP041025\|CRISPRCasFinder,CRT	2754713-2754742	30	NZ_CP022118	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence	198385-198414	9	0.7
NZ_CP041025_1	1.27\|2755175\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755175-2755204	30	MN693189	Marine virus AFVG_25M326, complete genome	13510-13539	9	0.7
NZ_CP041025_1	1.28\|2755241\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755241-2755270	30	MK284528	Bacillus phage DK3, complete genome	264-293	9	0.7
NZ_CP041025_1	1.28\|2755241\|30\|NZ_CP041025\|CRISPRCasFinder,CRT,PILER-CR	2755241-2755270	30	MK284526	Bacillus phage DK1, complete genome	266-295	9	0.7

1. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaagcggaacagcgccgacgc	Protospacer
**************.********. .*  *

2. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaagcggaacagcgacgaggg	Protospacer
**************.********  .**

3. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

4. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

5. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

6. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

7. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

8. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

9. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

10. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

11. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

12. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

13. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

14. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

15. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 6, identity: 0.8

ctggccgttgaagcagaacagcgtgaagcc-----	CRISPR spacer
ctggccgttgaagcggaacag-----agccgacgg	Protospacer
**************.******     ****

16. spacer 1.14|2754317|30|NZ_CP041025|CRISPRCasFinder,CRT matches to CP031731 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

aaaggaaatattcgccgtgctgggctatta	CRISPR spacer
caacaaaacattcgccgagctgggctatga	Protospacer
 ** .***.******** ********** *

17. spacer 1.19|2754647|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_026598 (Mycobacterium phage Milly, complete genome) position: , mismatch: 6, identity: 0.8

tcacgcgggcggcggggtaatggacggcga	CRISPR spacer
cggctcgggcggcggcctaatggacggcga	Protospacer
. .* **********  *************

18. spacer 1.19|2754647|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tcacgcgggcggcggggtaatggacggcga	CRISPR spacer
gcaggtcggcggcgcggtaatgggcggcga	Protospacer
 ** *. ******* ********.******

19. spacer 1.19|2754647|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP019193 (Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 plasmid pATCC10717, complete sequence) position: , mismatch: 6, identity: 0.8

tcacgcgggcggcggggtaatggacggcga-	CRISPR spacer
ggacgcgggcggcggggtcatgg-cggcagt	Protospacer
  **************** **** ****..

20. spacer 1.19|2754647|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 6, identity: 0.8

tcacgcgggcggcggggtaatggacggcga	CRISPR spacer
gcaggtcggcggcgcggtaatgggcggcga	Protospacer
 ** *. ******* ********.******

21. spacer 1.19|2754647|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tcacgcgggcggcggggtaatggacggcga	CRISPR spacer
gcaggtcggcggcgcggtaatggccggcga	Protospacer
 ** *. ******* ******** ******

22. spacer 1.26|2755109|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024449 (Moraxella osloensis strain NP7 plasmid pNP7-6, complete sequence) position: , mismatch: 6, identity: 0.8

--tattgacataatcattatcatgatattctt	CRISPR spacer
gcaaatg--ataatcattatcattttattctt	Protospacer
   * **  **************  *******

23. spacer 1.1|2753459|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

tcaagggtggtgaccggtagggcctctgtg	CRISPR spacer
atcagggtggtgaccggtaggcccccgggg	Protospacer
 . ****************** **.* * *

24. spacer 1.1|2753459|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

tcaagggtggtgaccggtagggcctctgtg	CRISPR spacer
atcagggtggtgaccggtaggcccccgggg	Protospacer
 . ****************** **.* * *

25. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaagcggaacagcgccgacgg	Protospacer
**************.********. .*

26. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaagcggaacagcgccgacgg	Protospacer
**************.********. .*

27. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaagcggaacagcgccgacgg	Protospacer
**************.********. .*

28. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctcgccgttgaagcggaacagcgccgaggg	Protospacer
** ***********.********. .**

29. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctcgccgttgaagcggaacagcgccgaggg	Protospacer
** ***********.********. .**

30. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctcgccgttgaagcggaacagcgccgaggg	Protospacer
** ***********.********. .**

31. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggtcgttgaagcggaacagcgccgaggg	Protospacer
****.*********.********. .**

32. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaaccggaacagcgccgaggg	Protospacer
************ *.********. .**

33. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_013697 (Deftia phage phiW-14, complete genome) position: , mismatch: 7, identity: 0.767

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttggagtagaacagcgacacgtt	Protospacer
**********.**.*********  * *..

34. spacer 1.20|2754713|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 7, identity: 0.767

tgaaaaactttgaatatatctactatcaag	CRISPR spacer
tttgcaaatttgtatatatctactatcaat	Protospacer
*  . ** **** ****************

35. spacer 1.22|2754845|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gcggttttgatccgcagtgcgcgccgccga	CRISPR spacer
gtggacgtgatccgcaatgcgcgccgcctg	Protospacer
*.** . *********.*********** .

36. spacer 1.26|2755109|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tattgacataatcattatcatgatattctt	CRISPR spacer
tagacacataatcattatgatgatatctgt	Protospacer
**   ************* *******.. *

37. spacer 1.26|2755109|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 7, identity: 0.767

tattgacataatcattatcatgatattctt	CRISPR spacer
tttcttaataataattataatgatattctt	Protospacer
* *.   ***** ***** ***********

38. spacer 1.26|2755109|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 7, identity: 0.767

tattgacataatcattatcatgatattctt	CRISPR spacer
tttcttaataataattataatgatattctt	Protospacer
* *.   ***** ***** ***********

39. spacer 1.26|2755109|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 7, identity: 0.767

tattgacataatcattatcatgatattctt	CRISPR spacer
tttcttaataataattataatgatattctt	Protospacer
* *.   ***** ***** ***********

40. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
gaaaataatacatcaattgatatatatgaa	Protospacer
.************** *******.** ..

41. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT222313 (Pseudomonas cerasi isolate Sour cherry (Prunus cerasus) symptomatic leaf plasmid p58T1, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
aaaaataatacattatttgatgggtcagta	Protospacer
*************.*******. ** *.

42. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963398 (Pseudomonas cerasi isolate PL963 plasmid PP3, complete sequence) position: , mismatch: 7, identity: 0.767

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
aaaaataatacattatttgatgggtcagta	Protospacer
*************.*******. ** *.

43. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaaccggaacagcgccgacgg	Protospacer
************ *.********. .*

44. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 8, identity: 0.733

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ctggccgttgaaccggaacagcgccgacgg	Protospacer
************ *.********. .*

45. spacer 1.7|2753855|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_AP019656 (Vibrio panuliri strain JCM 19500 plasmid pVPan1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaatgttttcaatggcagggtgtcccacg	CRISPR spacer
tgcatgttttgaatggcagggtgtaatgag	Protospacer
*  ******* *************  .. *

46. spacer 1.11|2754119|30|NZ_CP041025|CRISPRCasFinder,CRT matches to MN035556 (Leviviridae sp. isolate H2_Rhizo_33_scaffold_597 RNA-dependent RNA polymerase (H2Rhizo33597_000001), hypothetical protein (H2Rhizo33597_000002), and hypothetical protein (H2Rhizo33597_000003) genes, complete cds) position: , mismatch: 8, identity: 0.733

ttttttcttgacagtatgccttatacatta-	CRISPR spacer
ccttttcttgacagtattccttac-tgtcac	Protospacer
..*************** *****. ..*.*

47. spacer 1.16|2754449|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 8, identity: 0.733

tccgaccccttgaaaccgcaaccgtaaaca	CRISPR spacer
tccgaccacttgaaagcgcaacccgattgg	Protospacer
******* ******* *******  *   .

48. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MF370225 (Salmonella phage ST11, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

49. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NC_005282 (Enterobacteria phage Felix 01, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

50. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MG251392 (Salmonella virus VSe102, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

51. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to JF461087 (Salmonella phage FO1a, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

52. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NC_041922 (Salmonella phage Si3, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

53. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK965970 (Salmonella phage DaR-2019b isolate 6717_4FA, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

54. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MG251391 (Salmonella virus VSe11, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

55. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MG969405 (UNVERIFIED: Salmonella phage GE_vB_B1, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

56. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to AF320576 (Bacteriophage Felix 01, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

57. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to JX181814 (Salmonella phage SBA-1781, partial genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

58. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK965969 (Salmonella phage DaR-2019a isolate 6712_28b, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

59. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to KX377933 (Escherichia phage vB_EcoM_Alf5, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

60. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MG969406 (UNVERIFIED: Salmonella phage GE_vB_B3, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

61. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NC_027337 (Escherichia phage vB_EcoM-VpaE1, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

62. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MG969414 (UNVERIFIED: Salmonella phage GE_vB_NS7, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

63. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MN850631 (Escherichia phage mio, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

64. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MN850619 (Escherichia phage finno, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

65. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to JX181823 (Salmonella phage SPT-1, partial genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

66. spacer 1.23|2754911|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to KP143762 (Salmonella phage Mushroom, complete genome) position: , mismatch: 8, identity: 0.733

tgtgttgttctttacaacacacccttcact	CRISPR spacer
aatagtgttcttcacaacacaccattcata	Protospacer
 .*. *******.********** ****.

67. spacer 1.25|2755043|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 8, identity: 0.733

agcaatttattatatgaggggataagtaac	CRISPR spacer
tttaatttattatatgaggagagaagaatg	Protospacer
  .****************.** *** *

68. spacer 1.25|2755043|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 8, identity: 0.733

agcaatttattatatgaggggataagtaac	CRISPR spacer
tttaatttattatatgaggagagaagaatg	Protospacer
  .****************.** *** *

69. spacer 1.25|2755043|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 8, identity: 0.733

agcaatttattatatgaggggataagtaac	CRISPR spacer
tttaatttattatatgaggagagaagaatg	Protospacer
  .****************.** *** *

70. spacer 1.26|2755109|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 8, identity: 0.733

tattgacataatcattatcatgatattctt	CRISPR spacer
caactgtataatcattagcattatattctt	Protospacer
.* . ..********** *** ********

71. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MN694047 (Marine virus AFVG_250M130, complete genome) position: , mismatch: 8, identity: 0.733

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
aaaaataatacatcaatttatatagtacct	Protospacer
*************** ** ****.  *  .

72. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MN693600 (Marine virus AFVG_25M483, complete genome) position: , mismatch: 8, identity: 0.733

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
ttaaataatacatcatttgaaataacagac	Protospacer
  ****************** **.  *..*

73. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MN694132 (Marine virus AFVG_250M1196, complete genome) position: , mismatch: 8, identity: 0.733

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
aaaaataatacatcaatttatatagtacct	Protospacer
*************** ** ****.  *  .

74. spacer 1.2|2753525|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NC_015693 (Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequence) position: , mismatch: 9, identity: 0.7

ctggccgttgaagcagaacagcgtgaagcc	CRISPR spacer
ttggccgttgaagcaggacaccgttggcaa	Protospacer
.***************.*** *** ..

75. spacer 1.13|2754251|30|NZ_CP041025|CRISPRCasFinder,CRT matches to MN393079 (Salmonella virus VSiA, complete genome) position: , mismatch: 9, identity: 0.7

cgcgtaatcgataaggcttatcgcaagagc	CRISPR spacer
taaaaaatcgataaagcttatcgcaaaaat	Protospacer
.. . *********.***********.*..

76. spacer 1.13|2754251|30|NZ_CP041025|CRISPRCasFinder,CRT matches to MH424444 (Salmonella virus VSiP, complete genome) position: , mismatch: 9, identity: 0.7

cgcgtaatcgataaggcttatcgcaagagc	CRISPR spacer
taaaaaatcgataaggcttatagcaaaaat	Protospacer
.. . **************** ****.*..

77. spacer 1.20|2754713|30|NZ_CP041025|CRISPRCasFinder,CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tgaaaaactttgaatatatctactatcaag	CRISPR spacer
ggaaaaacgttgaatatagctactgcgcgt	Protospacer
 ******* ********* *****..  .

78. spacer 1.27|2755175|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MN693189 (Marine virus AFVG_25M326, complete genome) position: , mismatch: 9, identity: 0.7

aaaaataatacatcatttgatatgtaaagc	CRISPR spacer
ttaaataatacatcatttgaaattacagat	Protospacer
  ****************** **   *...

79. spacer 1.28|2755241|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK284528 (Bacillus phage DK3, complete genome) position: , mismatch: 9, identity: 0.7

ttcgctttcatacatttcataaccaaaaca	CRISPR spacer
acttttttcatacttttcataatcaaaatt	Protospacer
 .. .******** ********.*****.

80. spacer 1.28|2755241|30|NZ_CP041025|CRISPRCasFinder,CRT,PILER-CR matches to MK284526 (Bacillus phage DK1, complete genome) position: , mismatch: 9, identity: 0.7

ttcgctttcatacatttcataaccaaaaca	CRISPR spacer
acttttttcatacttttcataatcaaaatt	Protospacer
 .. .******** ********.*****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

349448 : 402318

Synechococcus_phage(18.75%)

protease,head,portal,capsid,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099472528.1\|349448_350498_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_099472527.1\|350508_351384_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_099472525.1\|351387_351573_+	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_099472794.1\|351765_353163_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	5.0e-24	29.8
WP_099472524.1\|353506_354028_+	peroxiredoxin	A0A1D8KSL1	Synechococcus_phage	3.1e-51	59.5
WP_099472522.1\|354125_355013_-	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_099472520.1\|355099_355984_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_099472518.1\|356267_358022_+	acetolactate synthase 3 large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.2e-54	32.0
WP_099472517.1\|358044_358569_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_099472516.1\|358632_359652_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_133118568.1\|359828_360344_+	hypothetical protein	NA	NA	NA	NA
WP_099472514.1\|360504_361542_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_099472513.1\|361547_362462_-	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	5.8e-37	32.0
WP_099472512.1\|362664_364011_+	alpha-L-glutamate ligase	I3ULC9	Synechococcus_phage	5.2e-18	24.5
WP_099472511.1\|364023_365829_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	4.1e-18	24.5
WP_099472510.1\|365948_366890_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_099472509.1\|367149_368127_-	hypothetical protein	NA	NA	NA	NA
WP_099472508.1\|368144_369137_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_099472507.1\|369276_371667_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_099472506.1\|371668_372757_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	3.2e-26	36.6
WP_099472505.1\|372867_373227_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_099472504.1\|373240_373438_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_099472503.1\|373559_374855_-	DUF418 domain-containing protein	NA	NA	NA	NA
WP_099472502.1\|375026_375959_+	TraB/GumN family protein	NA	NA	NA	NA
WP_099472501.1\|376339_376861_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.1e-13	35.2
WP_099472500.1\|377005_378943_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.4e-119	36.5
WP_099472792.1\|379114_379858_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_099472499.1\|379854_380520_+	cyclase family protein	NA	NA	NA	NA
WP_099472498.1\|380505_381378_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_099472497.1\|381469_382303_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_139932291.1\|382405_382720_+	hypothetical protein	NA	NA	NA	NA
WP_099472495.1\|382764_383880_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_099472494.1\|383885_384554_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_099472493.1\|384655_384970_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_099472492.1\|384981_385614_+	cation transporter	NA	NA	NA	NA
WP_099472491.1\|385665_385899_-	DUF3126 family protein	NA	NA	NA	NA
WP_099472490.1\|385895_386474_-	hypothetical protein	NA	NA	NA	NA
WP_133118567.1\|386801_387185_+	TonB family protein	NA	NA	NA	NA
WP_099472488.1\|387425_388043_+	DUF1013 domain-containing protein	NA	NA	NA	NA
WP_099472487.1\|388183_388354_-	YdcH family protein	NA	NA	NA	NA
WP_099472486.1\|388521_389103_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_099472790.1\|389233_389431_+	DUF465 domain-containing protein	NA	NA	NA	NA
WP_099472485.1\|389481_390216_-	diguanylate cyclase	G3MA91	Bacillus_virus	2.5e-14	31.3
WP_099472484.1\|390466_390961_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.3e-21	42.8
WP_099472483.1\|390974_392066_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_099472482.1\|392158_392848_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_099472481.1\|393078_393750_-	COQ9 family protein	NA	NA	NA	NA
WP_099472480.1\|393948_394155_+	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	5.9e-06	49.2
WP_099472479.1\|394270_394738_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_099472478.1\|394712_395753_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_133118566.1\|395794_396394_+	hypothetical protein	NA	NA	NA	NA
WP_099472476.1\|396412_396592_-	hypothetical protein	NA	NA	NA	NA
WP_099472475.1\|397071_397515_+	hypothetical protein	NA	NA	NA	NA
WP_099472788.1\|397561_398857_+	DNA-packaging protein	A0A1V0DY66	Dinoroseobacter_phage	1.9e-86	41.3
WP_099472474.1\|399011_400232_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	2.1e-79	44.1
WP_099472473.1\|400228_400549_+	hypothetical protein	NA	NA	NA	NA
WP_099472472.1\|400549_401104_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.9e-30	49.6
WP_099472471.1\|401109_402318_+\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	1.9e-91	45.7

DBSCAN-SWA_2

1960229 : 1970045

uncultured_Mediterranean_phage(77.78%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099474702.1\|1960229_1961438_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A2L0UZ92	Agrobacterium_phage	1.4e-38	45.3
WP_099474704.1\|1961434_1962133_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_099474706.1\|1962087_1962675_-	DUF1285 domain-containing protein	NA	NA	NA	NA
WP_099474708.1\|1962722_1963235_-	N-acetyltransferase	NA	NA	NA	NA
WP_099474710.1\|1963386_1964343_-	M23 family metallopeptidase	Q8SBN9	Clostridium_phage	1.9e-14	36.0
WP_099474712.1\|1964420_1965068_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.4e-31	44.5
WP_099474714.1\|1965067_1965850_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.1e-36	36.8
WP_099474715.1\|1965846_1967121_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.5e-99	46.6
WP_099474717.1\|1967113_1967941_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	4.3e-55	47.8
WP_099474719.1\|1967937_1968243_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_099474721.1\|1968266_1968497_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	3.6e-12	84.4
WP_099474723.1\|1968615_1969251_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.1e-42	43.6
WP_099475002.1\|1969277_1970045_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	5.7e-38	37.6

DBSCAN-SWA_3

2092799 : 2101041

uncultured_Mediterranean_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099474882.1\|2092799_2093495_+	helix-turn-helix transcriptional regulator	A5X9F5	Aeromonas_virus	2.1e-15	36.2
WP_099474883.1\|2093536_2093929_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_099474884.1\|2094565_2095720_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.3e-102	53.4
WP_099474885.1\|2095716_2096757_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_099474886.1\|2096795_2097257_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	2.3e-34	51.2
WP_099474887.1\|2097267_2097810_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	3.9e-33	48.8
WP_099474888.1\|2097832_2098333_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	4.7e-33	52.3
WP_099475015.1\|2098344_2101041_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	8.3e-100	34.0

DBSCAN-SWA_4

2724822 : 2849242

100

Ralstonia_phage(11.76%)

integrase,transposase

attL 2743606:2743620|attR 2807981:2807995

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099472007.1\|2724822_2725260_+\|transposase	transposase	NA	NA	NA	NA
WP_099472006.1\|2725858_2729911_-	cobaltochelatase subunit CobN	NA	NA	NA	NA
WP_099472005.1\|2729843_2730188_-	DUF2149 domain-containing protein	NA	NA	NA	NA
WP_099472004.1\|2730174_2730759_-	hypothetical protein	NA	NA	NA	NA
WP_099472003.1\|2730961_2733187_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_099472364.1\|2734187_2735564_-	phosphomannomutase CpsG	A0A127AWJ1	Bacillus_phage	1.5e-33	27.1
WP_099472366.1\|2735560_2736793_-	N-acylglucosamine 2-epimerase	NA	NA	NA	NA
WP_099472363.1\|2736821_2737787_-	ROK family protein	NA	NA	NA	NA
WP_099472362.1\|2737946_2740637_-	TonB-dependent receptor	NA	NA	NA	NA
WP_099472361.1\|2740774_2741710_-	DUF1861 family protein	NA	NA	NA	NA
WP_099472360.1\|2741743_2742814_-	glycosidase	NA	NA	NA	NA
WP_133118558.1\|2742803_2744420_-	glucohydrolase	NA	NA	NA	NA
2743606:2743620	attL	NA	NA	NA	NA
WP_099472365.1\|2744430_2745216_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_099472358.1\|2745275_2746166_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_099472357.1\|2746168_2747467_-	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_099472356.1\|2747474_2748734_-	hypothetical protein	NA	NA	NA	NA
WP_133118557.1\|2748981_2750076_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_099472354.1\|2750080_2751238_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.3e-25	32.7
WP_099472353.1\|2751496_2753140_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_099472352.1\|2755682_2756012_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_099472351.1\|2756008_2756965_-	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_099472350.1\|2756870_2760005_-	type II CRISPR RNA-guided endonuclease Cas9	NA	NA	NA	NA
WP_099472349.1\|2761639_2762446_-	hypothetical protein	NA	NA	NA	NA
WP_133118556.1\|2762752_2763061_-	hypothetical protein	NA	NA	NA	NA
WP_099472347.1\|2763063_2763285_-	hypothetical protein	NA	NA	NA	NA
WP_099472346.1\|2763585_2764470_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_099472345.1\|2764689_2764914_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_099472344.1\|2765313_2766600_+	hypothetical protein	NA	NA	NA	NA
WP_099472343.1\|2766921_2767137_+	hypothetical protein	NA	NA	NA	NA
WP_099472342.1\|2767155_2768808_+	recombinase family protein	R9TP69	Rhizobium_phage	8.1e-90	38.1
WP_139932340.1\|2768993_2770166_+\|integrase	tyrosine-type recombinase/integrase	A0A221SAN4	Ralstonia_phage	3.3e-45	32.3
WP_139932341.1\|2770197_2770602_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_099474958.1\|2770579_2771347_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_139932342.1\|2771373_2771613_-	hypothetical protein	NA	NA	NA	NA
WP_099471096.1\|2771675_2771867_-	hypothetical protein	NA	NA	NA	NA
WP_099471095.1\|2772243_2773977_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	2.0e-30	29.9
WP_099471094.1\|2774933_2775173_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_099471093.1\|2775165_2775576_+	hypothetical protein	NA	NA	NA	NA
WP_099471092.1\|2776022_2776952_+	hypothetical protein	NA	NA	NA	NA
WP_114365294.1\|2777031_2778543_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_099471090.1\|2778536_2779298_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	5.0e-42	39.5
WP_099471089.1\|2779782_2780898_-	dipeptide epimerase	NA	NA	NA	NA
WP_099471088.1\|2780902_2782288_-	serine hydrolase	NA	NA	NA	NA
WP_099471087.1\|2782313_2783807_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_099471086.1\|2783841_2786283_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_099471085.1\|2786322_2786577_-	hypothetical protein	NA	NA	NA	NA
WP_133118512.1\|2786530_2787106_-	hypothetical protein	NA	NA	NA	NA
WP_099471083.1\|2787346_2788822_-	MFS transporter	NA	NA	NA	NA
WP_133118510.1\|2788895_2791376_-	TonB-dependent receptor	NA	NA	NA	NA
WP_099471081.1\|2791565_2792648_-	DUF4880 domain-containing protein	NA	NA	NA	NA
WP_099471080.1\|2792685_2793282_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_099471079.1\|2793630_2794581_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_139932343.1\|2794756_2795719_-	hypothetical protein	NA	NA	NA	NA
WP_099471077.1\|2795862_2797221_+\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_133118573.1\|2797475_2797661_-	hypothetical protein	NA	NA	NA	NA
WP_099472817.1\|2797927_2798236_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_099472819.1\|2798578_2799796_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_099470706.1\|2800185_2801346_+\|integrase	site-specific integrase	A0A221SAN4	Ralstonia_phage	5.6e-45	32.0
WP_099470705.1\|2801470_2802658_+	ATP-binding protein	NA	NA	NA	NA
WP_099470704.1\|2802709_2803645_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	2.3e-28	34.8
WP_099470703.1\|2804197_2804413_-	DUF2274 domain-containing protein	NA	NA	NA	NA
WP_139932344.1\|2804409_2805597_-	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_139932345.1\|2805597_2806599_-	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_099471985.1\|2806790_2807078_+\|transposase	transposase	NA	NA	NA	NA
WP_114365303.1\|2807038_2807941_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	5.1e-54	43.3
WP_099471987.1\|2807924_2808635_-	hypothetical protein	NA	NA	NA	NA
2807981:2807995	attR	NA	NA	NA	NA
WP_099471988.1\|2808638_2808902_-	conjugal transfer protein	NA	NA	NA	NA
WP_099471989.1\|2808898_2809234_-	TrbC/VIRB2 family protein	NA	NA	NA	NA
WP_099471996.1\|2809273_2810203_-	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA
WP_099471990.1\|2810237_2810702_-	CopG family transcriptional regulator	NA	NA	NA	NA
WP_099471991.1\|2810698_2812705_-	conjugal transfer protein TraG	NA	NA	NA	NA
WP_099471992.1\|2813148_2814042_-	ImmA/IrrE family metallo-endopeptidase	Q332A2	Clostridium_botulinum_C_phage	2.0e-05	30.5
WP_099471993.1\|2814038_2814368_-	helix-turn-helix transcriptional regulator	F8TVE5	EBPR_siphovirus	2.0e-08	40.7
WP_099471994.1\|2814514_2814775_+	DUF3892 domain-containing protein	NA	NA	NA	NA
WP_099471995.1\|2814810_2815023_+	hypothetical protein	NA	NA	NA	NA
WP_139932303.1\|2815220_2816306_+\|transposase	IS481 family transposase	E9P643	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	3.2e-151	72.9
WP_099470691.1\|2816364_2818341_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_099470692.1\|2818816_2819311_-	conjugative transfer signal peptidase TraF	NA	NA	NA	NA
WP_099470693.1\|2819307_2819877_-	DUF2840 domain-containing protein	NA	NA	NA	NA
WP_099470694.1\|2819773_2819989_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099470695.1\|2820087_2820720_-	hypothetical protein	NA	NA	NA	NA
WP_139932346.1\|2821273_2822470_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_139932347.1\|2822473_2823460_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_099471977.1\|2823542_2825126_-	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.5e-24	27.5
WP_099471962.1\|2825195_2826170_-	dipeptide epimerase	NA	NA	NA	NA
WP_099471963.1\|2826162_2827206_-	DUF1611 domain-containing protein	NA	NA	NA	NA
WP_099471964.1\|2827198_2828668_-	M81 family metallopeptidase	NA	NA	NA	NA
WP_099471965.1\|2828664_2830449_-	CocE/NonD family hydrolase	NA	NA	NA	NA
WP_099471966.1\|2830510_2831974_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_099471978.1\|2832411_2833107_+\|transposase	IS6 family transposase	A0A1X9I6E7	Streptococcus_phage	2.8e-23	36.6
WP_099471967.1\|2833193_2834309_-	hypothetical protein	NA	NA	NA	NA
WP_099471970.1\|2834891_2836325_-	amidase	NA	NA	NA	NA
WP_099471971.1\|2836346_2837657_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_133118538.1\|2837799_2839182_-	MFS transporter	NA	NA	NA	NA
WP_099471973.1\|2839242_2841030_-	thiamine pyrophosphate-binding protein	M4QSI1	Ostreococcus_lucimarinus_virus	4.4e-41	27.4
WP_099471974.1\|2841926_2842997_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_099471975.1\|2844663_2846973_-	TonB-dependent receptor	NA	NA	NA	NA
WP_099471976.1\|2847225_2847648_+\|transposase	IS200/IS605 family transposase	W0UUZ0	Sulfolobus_monocaudavirus	1.9e-19	42.5
WP_139932348.1\|2847644_2847995_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_139932349.1\|2847891_2849242_+\|transposase	IS3 family transposase	Q88285	Snakehead_retrovirus	2.3e-05	32.0

DBSCAN-SWA_5

4176639 : 4186029

Catovirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099474082.1\|4176639_4177626_+	D-glycerate dehydrogenase	A0A1V0SBV6	Catovirus	2.5e-30	28.4
WP_099474080.1\|4177631_4177820_-	hypothetical protein	NA	NA	NA	NA
WP_099474079.1\|4177975_4178428_-	hypothetical protein	NA	NA	NA	NA
WP_099474076.1\|4178430_4179183_-	molybdopterin-synthase adenylyltransferase MoeB	A0A291ATS8	Pandoravirus	9.0e-12	36.0
WP_099474074.1\|4179169_4179463_-	hypothetical protein	NA	NA	NA	NA
WP_099474073.1\|4179476_4180436_-	cysteine synthase A	A0A1W6JIM2	Lactococcus_phage	1.4e-78	53.9
WP_099474071.1\|4180472_4180928_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_099474069.1\|4180945_4181401_-	dUTP diphosphatase	K4JSC8	Caulobacter_phage	7.0e-44	62.1
WP_099474067.1\|4181418_4182675_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	A0A0M5I219	Turkeypox_virus	3.8e-15	42.1
WP_099474066.1\|4182771_4184307_-	2-polyprenylphenol 6-hydroxylase	A0A2P0VMP1	Tetraselmis_virus	1.9e-16	22.0
WP_099474305.1\|4184308_4185112_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA
WP_099474064.1\|4185186_4186029_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	A0A127AWE5	Bacillus_phage	8.8e-24	29.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage