CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP034552	Bacillus cereus ATCC 14579 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP034551	Bacillus cereus ATCC 14579 chromosome, complete genome	3 crisprs	cas3,csa3,Cas14u_CAS-V,WYL,DinG,RT,DEDDh	3	10	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

303 : 15117

Bacillus_phage(75.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113732243.1\|303_489_+	helix-turn-helix domain-containing protein	B6RT33	Bacillus_virus	8.7e-09	54.1
WP_000185743.1\|475_973_+	hypothetical protein	Q5ILD0	Bacillus_phage	5.1e-72	86.5
WP_113732235.1\|1047_1263_+	cytoplasmic protein	B6RT35	Bacillus_virus	3.3e-12	54.3
WP_001284675.1\|1327_2029_+	hypothetical protein	B6RT36	Bacillus_virus	5.9e-74	63.5
WP_000039472.1\|2041_4231_+	type B DNA polymerase	B6RT37	Bacillus_virus	0.0e+00	79.2
WP_113732236.1\|4233_4434_+	LexA family transcriptional regulator	A0A161ISH4	Bacillus_phage	2.9e-26	89.2
WP_165450346.1\|4449_4599_+	hypothetical protein	K7X6R4	Bacillus_phage	3.3e-11	78.6
WP_164928354.1\|4717_5065_+	hypothetical protein	NA	NA	NA	NA
WP_167492322.1\|5052_5607_+	hypothetical protein	B6RT44	Bacillus_virus	9.2e-30	50.0
WP_000060307.1\|5958_6609_+	hypothetical protein	S5YPG1	Bacillus_phage	2.5e-95	75.4
WP_000398582.1\|6621_6762_+	hypothetical protein	Q5ILB8	Bacillus_phage	1.1e-11	78.3
WP_165450347.1\|6776_6914_+	hypothetical protein	Q5ILB6	Bacillus_phage	2.0e-10	74.4
WP_000852326.1\|6917_7985_+	hypothetical protein	A0A160LKS4	Bacillus_phage	3.1e-135	65.6
WP_000157490.1\|8025_8256_+	hypothetical protein	A0A160LLA6	Bacillus_phage	2.0e-10	47.8
WP_011109762.1\|8258_8432_+	hypothetical protein	NA	NA	NA	NA
WP_001057982.1\|8505_8928_+	hypothetical protein	A0A160LKQ5	Bacillus_phage	4.7e-26	66.4
WP_001082420.1\|9101_9248_+	hypothetical protein	Q5ILA8	Bacillus_phage	1.5e-11	72.9
WP_000801967.1\|9259_9538_+	hypothetical protein	NA	NA	NA	NA
WP_001290296.1\|9550_10144_+	hypothetical protein	A0A160LKP5	Bacillus_phage	8.6e-26	44.4
WP_011109763.1\|10147_10879_+	N-acetylmuramoyl-L-alanine amidase	A0A160LKR7	Bacillus_phage	7.0e-102	84.7
WP_011109764.1\|10826_11348_+	membrane protein	A0A160LKQ7	Bacillus_phage	2.2e-65	72.3
WP_000032648.1\|11360_12155_+	hypothetical protein	A0A161JRA8	Bacillus_phage	8.3e-08	32.0
WP_000450149.1\|12159_14121_+	hypothetical protein	NA	NA	NA	NA
WP_001207867.1\|14133_14421_+	hypothetical protein	NA	NA	NA	NA
WP_000215889.1\|14433_15117_+	N-acetylmuramoyl-L-alanine amidase	A0A160LKP9	Bacillus_phage	8.9e-83	67.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP034551

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034551_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034551_1

3307981-3308069

Orphan

Consensus_repeat	Method
GGCCGGTCGCTCCCGCCTGCCCCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034551_1

>merge|NZ_CP034551|1|3307981-3308069|CRISPRCasFinder
GGCCGGTCGCTCCCGCCTGCCCCGTTACCCCTTGTGGACCTTGGATTCCTTGTGGACCTTGAGGACCCGTTGCTCCCGTCTGGCCGGTT

>NZ_CP034551|1|1|3307981-3308069|CRISPRCasFinder
GGCCGGTCGCTCCCGCCTGCCCCGTT	ACCCCTTGTGGACCTTGGATTCCTTGTGGACCTTGAG
GACCCGTTGCTCCCGTCTGGCCGGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034551.1\|WP_000540457.1\|3301697_3302144_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240033
NZ_CP034551.1\|WP_000241785.1\|3303541_3304699_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|237107
NZ_CP034551.1\|WP_000938438.1\|3317232_3317781_-\|DUF2179-domain-containing-protein	unknown	unknown	gnl\|CDD\|235234
NZ_CP034551.1\|WP_001290900.1\|3302152_3303151_-\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183592
NZ_CP034551.1\|WP_000539732.1\|3305913_3306162_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP034551.1\|WP_000207417.1\|3299994_3300717_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP034551.1\|WP_000747681.1\|3316870_3317110_+\|DUF3923-family-protein	unknown	unknown	gnl\|CDD\|289806
NZ_CP034551.1\|WP_000613883.1\|3317979_3318393_-\|ATP-synthase-subunit-I	unknown	unknown	gnl\|CDD\|377159
NZ_CP034551.1\|WP_000355451.1\|3300840_3301680_+\|DUF2785-domain-containing-protein	unknown	unknown	gnl\|CDD\|371322
NZ_CP034551.1\|WP_001024472.1\|3315202_3316117_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP034551.1\|WP_011110255.1\|3299103_3299943_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_001072930.1\|3313313_3313856_-\|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|378696
NZ_CP034551.1\|WP_000411484.1\|3304728_3305850_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP034551.1\|WP_001215813.1\|3309863_3312371_-\|collagen-like-protein	unknown	unknown	gnl\|CDD\|367362
NZ_CP034551.1\|WP_000601230.1\|3306371_3306833_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP034551.1\|WP_002195686.1\|3312517_3313204_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP034551.1\|WP_000402273.1\|3318445_3319774_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP034551.1\|WP_000945243.1\|3307110_3307254_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_000834865.1\|3313968_3315162_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP034551.1\|WP_000728046.1\|3316416_3316794_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP034551.1\|WP_000540457.1\|3301697_3302144_+\|NUDIX-hydrolase	gnl\|CDD\|240033	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.91073e-59
NZ_CP034551.1\|WP_000241785.1\|3303541_3304699_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|237107	PRK12464, PRK12464, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP034551.1\|WP_000938438.1\|3317232_3317781_-\|DUF2179-domain-containing-protein	gnl\|CDD\|235234	PRK04164, PRK04164, hypothetical protein; Provisional.	6.88941e-83
NZ_CP034551.1\|WP_001290900.1\|3302152_3303151_-\|tryptophan--tRNA-ligase	gnl\|CDD\|183592	PRK12556, PRK12556, tryptophanyl-tRNA synthetase; Provisional.	0
NZ_CP034551.1\|WP_000539732.1\|3305913_3306162_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.19524e-08
NZ_CP034551.1\|WP_000207417.1\|3299994_3300717_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.45413e-06
NZ_CP034551.1\|WP_000747681.1\|3316870_3317110_+\|DUF3923-family-protein	gnl\|CDD\|289806	pfam13061, DUF3923, Protein of unknown function (DUF3923). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.	4.67763e-12
NZ_CP034551.1\|WP_000613883.1\|3317979_3318393_-\|ATP-synthase-subunit-I	gnl\|CDD\|377159	pfam03899, ATP-synt_I, ATP synthase I chain. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI. AtpI is a Ca2+/Mg2+ transporter.	2.84419e-07
NZ_CP034551.1\|WP_001024472.1\|3315202_3316117_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.42477e-14
NZ_CP034551.1\|WP_001072930.1\|3313313_3313856_-\|CGNR-zinc-finger-domain-containing-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	5.22761e-18
NZ_CP034551.1\|WP_000411484.1\|3304728_3305850_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.99865e-58
NZ_CP034551.1\|WP_001215813.1\|3309863_3312371_-\|collagen-like-protein	gnl\|CDD\|367362	pfam03157, Glutenin_hmw, High molecular weight glutenin subunit. Members of this family include high molecular weight subunits of glutenin. This group of gluten proteins is thought to be largely responsible for the elastic properties of gluten, and hence, doughs. Indeed, glutenin high molecular weight subunits are classified as elastomeric proteins, because the glutenin network can withstand significant deformations without breaking, and return to the original conformation when the stress is removed. Elastomeric proteins differ considerably in amino acid sequence, but they are all polymers whose subunits consist of elastomeric domains, composed of repeated motifs, and non-elastic domains that mediate cross-linking between the subunits. The elastomeric domain motifs are all rich in glycine residues in addition to other hydrophobic residues. High molecular weight glutenin subunits have an extensive central elastomeric domain, flanked by two terminal non-elastic domains that form disulphide cross-links. The central elastomeric domain is characterized by the following three repeated motifs: PGQGQQ, GYYPTS[P/L]QQ, GQQ. It possesses overlapping beta-turns within and between the repeated motifs, and assumes a regular helical secondary structure with a diameter of approx. 1.9 nm and a pitch of approx. 1.5 nm.	1.59235e-08
NZ_CP034551.1\|WP_000601230.1\|3306371_3306833_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.15708e-12
NZ_CP034551.1\|WP_002195686.1\|3312517_3313204_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.07678e-23
NZ_CP034551.1\|WP_000402273.1\|3318445_3319774_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	2.61301e-160
NZ_CP034551.1\|WP_000355451.1\|3300840_3301680_+\|DUF2785-domain-containing-protein	gnl\|CDD\|371322	pfam10978, DUF2785, Protein of unknown function (DUF2785). Some members in this family are annotated as hypothetical membrane spanning proteins however this cannot be confirmed. The family has no known function.	1.69702e-39
NZ_CP034551.1\|WP_000834865.1\|3313968_3315162_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.05059e-70

>NZ_CP034551.1|WP_000945243.1|3307110_3307254_+|hypothetical-protein
MLRLSDHAIKMMEQRLRIEKQRTYQANKVVDNLHHKYFFQHIFQPKR
>NZ_CP034551.1|WP_000601230.1|3306371_3306833_+|GNAT-family-N-acetyltransferase
MILKLNSTSFEVATSILQVQIPAYKVEADYLNSTAIPRLYDTVNDIQNCVETFYGYFSENKLVGFISFVQEEKLIDIHRLVVSPNFFQKGIATKLLIYIFNMFPSSMAYIVQTGKANTPAITLYKKHGFITVSDTILPDGMILTQLKKTEYTK
>NZ_CP034551.1|WP_000539732.1|3305913_3306162_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGWIITLIVGAIIGAIASSITGKNFPGGMFGNIIAGLLGASLGGRLFGSFGPSFGGIHVVPALLGAIVLILIVSFVVKAAKK
>NZ_CP034551.1|WP_000411484.1|3304728_3305850_-|AI-2E-family-transporter
MEKINIRKRDKLRKFFREQNYLAVLLGFALLFINILLLTKISFVFTPFIVFLKTIFFPVLLAGVLFYILHPFVSLLEKKGVSRIVSIASIYLIVLGLFVFLVVTVIPIIKDQIDALIDNLPYFGHEIEQAARRFGESNLLGKIQENLNINVANMVKEYTVDFTKSLSSVTGNVTGFLSTVTEVVLTFVMVPFILFYLLKDGEQLPNHFLKFISEQRQPAAMRILDDMHYAISSYIRGQIIVSLFIGIMLLIGYLIIGIKYAVLLAILAMIVNIVPYVGPIIAITPALIIAFIDSPAMVLKVIIVMMVVQLAEGKFISPQVMGKKLDIHPITIIFIILTAGNLFGIMGIILAIPGYAILKVLVTHGYRFVKLNT
>NZ_CP034551.1|WP_000241785.1|3303541_3304699_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MVKYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIDLLEQQIKTFQPRIVSVATKDLADKLRTRISANTKITHGTDGFIAVATHPDSNLVLSSVVGVSGLLPTIEALKAKKDIAIANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCLKGENNKEIEKLIVTASGGAFRDKTRDEMQTLQAKDALKHPNWLMGAKLTIDSATLMNKGFEVMEARWLFDIPYKKINVMIHKESIIHSLVEFIDGSVMAQLGAPDMRMPIQYAFHYPTRLPSSYEKLNLLEIGSLHFEKPDLEKFPCLQYAYECGKIGGTTPAVLNAANEIANALFLKNEIAFFDIEKTIYKTVEAHHNVKDPSLDAILEADQWARQYANELLIKKR
>NZ_CP034551.1|WP_001290900.1|3302152_3303151_-|tryptophan--tRNA-ligase
MSEKIMLTGIKPTGYPHLGNYIGAIKPALQMSKNNEGRALYFIADYHALNAVHDSEKFSSYTKEVAATWLSLGLGEDVVFYRQTEVPEILELAWILACLTPKGLMNRAHAYKAKVEQNKEAGLEVDAGVNMGLYTYPILMAADILLFQATHVPVGKDQIQHIEIARDIATYFNHTFGTTFTLPEYVVQEEGAILPGLDGRKMSKSYGNVIPLFAEQEKLRKLIFKIKTDSSLPNEPKELETLFMIYKEFATEDEVQSLREKYETGIGWGDVKKELFRVVDHELAGPREKYAMYMNEPDLLYEALENGAEKARAIAKINLAEIKKRIGFERER
>NZ_CP034551.1|WP_000540457.1|3301697_3302144_+|NUDIX-hydrolase
MGYIEDMRNLVGNHPLILIGSHAIILNEKDEVLLQLRTDFNRWGIIGGALEYNETLEDALKREVFEETGLIIKNPELFRTYSGPDFFQIYPNGDQVHGVLVVYICREFHGELVCDHTESKELRFFSLDELPNNLPPVIEKIITDYLKK
>NZ_CP034551.1|WP_000355451.1|3300840_3301680_+|DUF2785-domain-containing-protein
MDITALQQQLELIQQNDYTQLQHIDVNELTLNMLQYIGTTDSYVRYQLIYKCFAHFIHHEFLMDDQLKLLLQTCLSDEYLYCDIYSPHTDGVFTRSYTVSLIALILQFANSHYFCTEEDIEEIKNKLITYTNLETDFRGYIENKGWAHCLAHVSDAFTEIVHNTYTTFEWYEELIHCLLNKIFIPSDLFHNNEDERIVTPLLAMLYHDFPQNDLISIIHKKIKRLPQIRKRLSLNEYCILCANIKTFLRTLFFRTKDDHNLAFTARKTERMLKELPNYY
>NZ_CP034551.1|WP_000207417.1|3299994_3300717_-|GNAT-family-N-acetyltransferase
MTTIEQLEKHFKIRRSASSIMIKENNAEVFTEEQLEEMVQYYVAEAEKDGLEKLHFEISSKSPNYDVYKKCFETYSFEYVTENMIVFKDIYEVEDVESEIDFKLIEEVGEEAFYSLWNEATGEPVAHDQFVHMMLEEIGEQWKEHCLIASVGEEPIGIVIPYIERGALEEGKLMYFAVTPNMRNKGYEAALFAGAMFVLKEIGASYYIGETNMQNEWMKDVFEKNGCQLLSSTERYVRKF
>NZ_CP034551.1|WP_011110255.1|3299103_3299943_-|hypothetical-protein
MLKQSMHSFVLLYPNVLLEGWNVEKVSERYEGEKWGTFWFQVVTPTGMFRVKEFFLDIMEPVFPDSCISQAKGDCFQYKGLVYWKGINYKGKESYVTSIWKTQVEISVDHGYVNQDEMERFLFELQPVNMELGKTILHTSFHLLSFQAKRSEMGEIGRCREWNAPDDVSYVNLLIHEKLNWKLESVGFGNDETQYVYWDEVNKLYALWVCRHKNKAYYPISSWTMNYGPKQIINGLEFYSHPNRGTVVYEDLGNEQIAYVFRGNPCTNFEQVKELFACL
>NZ_CP034551.1|WP_001215813.1|3309863_3312371_-|collagen-like-protein
MRHHRKCKKFGVALPLPLIGTTGPTGNSGPIGPTGGHEGPVGPTGVTGPTGATGPQGPQGIRGIQGPRGTTGAQGIQGVIGDTGEQGITGPTGLQGAQGLIGNQGLIGDIGVQGLEGIQGATGPAGSQGIQGIQGIQGEIGERGQTGAQGMQGERGVTGVSGVTGPQGPQGVQGIKGEQGAIGIQGEDGFQGIQGITGEEGPQGAQGIQGEVGPTGSTGMQGAQGISGIKGITGAIGLQGPQGVQGIQGITGATGFQGIKGIRGITGATGSIGTQGSEGPPGGPTGVTGPIGPSSGVTGPAGPPGPPGGPTGPTGATGSTGVSGGIGPIGGQGVQGITGPTGHQGVRGAQGAQGVVGAVGVQGAQGPQGNQGITGPTGAEGSQGIQGPLGVTGPTGAEGPKGIQGIQGVIGPTGAQGMVGIQGIAGPVGVTGAEGAQGAQGIRGATGPAGAQGIQGVQGIQGETGAAGTQGPQGVQGIQGTTGLTGTQGAQGPQGVQGIIGPTGAIGLQGPQGLQGITGPTGAQGVQGIQGVQGIIGPTGAQGIRGPQGNTGEIGITGPQGVQGAQGSQGPQGPQGNVGITGATGETGATGATGATGPQGVQGVQGITGIQGITGTAGNTGATSSQGIQGIQGVQGLQGPTGASGVTGASGSIGPVGAQGSQGPSGVVGPTGATGSAGSIGFFGIAGATGATGLPSGGGYFFSTSTSTIAANALIPINSGSTVFGSDVSLTNATTVTLSTPGIYLVSYYFQGDPTAGNETISVRLTLNGTQVAGSFIFYVTGGTFILEPAVSNTMVIEVTFSNATLSLQNGPLAIGHVTTLSGVITASLNVLKIV
>NZ_CP034551.1|WP_002195686.1|3312517_3313204_-|class-I-SAM-dependent-methyltransferase
MDCLPKYGPYTASEDEIHLFDSIKDKKVLDIGCGSGHSLQYMAEHGAEELWGLDFSRTQIETAHETLQSWNPKLICGAMEEEGDIPKGYFDIVYSIYALGWTSDLRKTLELIYSYVKPGGSFIFSWEHPVYSNLQYGTEEVAIKSSYHEETPITFETFKGENVQATLYKRKISTYINELNRVGFKIKRIEEPEPSSSFDGELAEPSMKYYSLYKARMVPTTFIIKARK
>NZ_CP034551.1|WP_001072930.1|3313313_3313856_-|CGNR-zinc-finger-domain-containing-protein
MNQNAPNELEYIREFLNTWRIPNDTREPIDLLQTEEDIKLFMKEYFDEEFPFHTIEELRGFREDIRMTIEGEGSLQKWLEKYPFHVHIKDDMKGITYEPVYEENVYTKVLSIVLMSIQENVWGRLKACPDCRWVFYDHSRNGSKRWCGMYAGEEGGRACGTIAKVKNYRAKRKGRSGYDM
>NZ_CP034551.1|WP_000834865.1|3313968_3315162_+|MFS-transporter
MKSFSTPIRFMLISSFFMSFGYFAVYAFLAIYLLTFLHFSAVQVGTVLTVMTITSRVIPLFSGLIADKIGYIIMMIAGLFLRGIGFIALGICSDFYTISISSALIGFGTAFYEPAARAIFGSQPAHLRKNLFTYLNLSFNCGAIIGPIAGGFILLLDPIYAFSLTGSLMLLFAFIFYLLKNHFQVTTENTSITLGIQAILQNKSFLLFSFIMIFFYIMFTQLTVALPLHMKNISSSNQLATLVITINAITGVIFMVLFRKLFHKYNTLSIIKYGVLLMSISFLLIPLFQHPYWLFICVILFTIGETLVLPNADITIANYSNESYTATFFGFYQLSLAFGFIIGNYTGTSSTSNLSGMYTPWLIFGGIGLIGFISLHILNIKKVASKEDIHLCNTSDL
>NZ_CP034551.1|WP_001024472.1|3315202_3316117_-|tetratricopeptide-repeat-protein
MNINEKAIEMFEQNKYEEAMELFQQAVHKSRDVQSLNNLAWMYFYEEENDEKALELIREVVKLNPSSYFPYNILGEIYIKQKKWEEAKEVLQKSISIQPSDEAYHNVAVAHYNLGELEKASDFFLRVAGDSDYIMYSYVKCLIDLERTTEAKEKLDTFNRESDNFLGEINVADLYVELNCYKEAIEWFEKGYKECWKSPNWIGRFVYALYKTNNFSRINEVIRECIEAKTAEIEDVQNEEVEENWTENDKKELIEEYTEENNCYKTMVERIKSGYVPGLEFETDYIGACYLFGCKRHNHLEYEK
>NZ_CP034551.1|WP_000728046.1|3316416_3316794_+|hypothetical-protein
MKKKLLVLLFTGIILSGCSTIAENSLESGKGSMELLTPTITAKDNELEIKTKGIDENKVTFIYVANKKVLEQKLKNGESYKLNIKDIEHAHRTDYKPKVQLLQTKDDDDDGEIVTFKQVRYTVKN
>NZ_CP034551.1|WP_000747681.1|3316870_3317110_+|DUF3923-family-protein
MKKRWISWWIGNIFWIIVFGIWAAIIWLRDVDGAGVIQTPEIKSISLIVLLITFIIPVFFQIIWLIINLRMSKKHNYTI
>NZ_CP034551.1|WP_000938438.1|3317232_3317781_-|DUF2179-domain-containing-protein
MLQALLIFVLQIIYVPILTIRTILLVKNQTRSAAGVGLLEGAIYIVSLGIVFQDLSNWMNIVAYVIGFSAGLLLGGYIENKLAIGYITYQVSLLDRCNELVDELRHSGFGVTVFEGEGINSIRYRLDIVAKRSREKELLEIINEIAPKAFMSSYEIRSFKGGYLTKAMKKRALMKKKDEHAS
>NZ_CP034551.1|WP_000613883.1|3317979_3318393_-|ATP-synthase-subunit-I
MIQEALRVYRLQLYVIFSGLLLMWTITPFGKQVTGFGIGLAVSAYCLWLLARRVEKLGKSIVMKKKAPGLGVLNRFAAAILGAIIMYEIEHEMEMWAFGTGILGGHFLMIANLAYANMQLVKEEEKQREHASKNIEL
>NZ_CP034551.1|WP_000402273.1|3318445_3319774_-|HlyC/CorC-family-transporter
MEIFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLSACQLGITVTAMGLGWLGEPTIEKLLHPLFEKWNLNPSISSVLTFGLAFMLMTYLHVVVGELAPKTMAIQKAEKVTLLFAAPLMMFYKVMYPFIWVLNGSARVITGLFGLKPASEHEVAHTEEELRLILSDSYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMKVIQNERYTRYPIFGEDKDDIIGMVNVKDFFIRYMTEDQKDLSSIRSYMRPIIEVMETTPIHDLLLQMQKKRIPMAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEAPPIQHVNEQHIIVDGKVLISEVKDLFGLHIEEDDVDTIGGWIMMQNHEIEEGQHVEAEGFEFKVLEKDAYQIKRVEIRKMEQEQEEEKAATV

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Crispr_ID: NZ_CP034551_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034551_2

3677785-3678478

Orphan

Consensus_repeat	Method
ACNGGTGCTACTGGNGCT	CRT

16 spacers

The CRISPR arrays of NZ_CP034551_2

>merge|NZ_CP034551|2|3677785-3678478|CRT
ACTGGTGCCACTGGACCTCGAGGTAACACGGGCGCTACTGGCGCTACCGGTGCCACTGGACCTCGAGGTAACACGGGCGCTACCGGTGCCACTGGACCTCAAGGTAACACGGGTGCTACTGGCGCTACCGGTGCCACTGGACCTCGAGGTAACACGGGCGCTACCGGCGCTACTGGACCTCAAGGTAACACGGTGCTACTGGGTGCTACTGGCGCTGGGTGCCACTGGACCTCGAAGGTAACATACGGGCGCTACTGGCGCTACCGGACCTCAAGGTAACACGGGCGCTACTGGCGCTACCGGTGCCACTGGACCTCAAGGTAACACGGGTGCTACCGGTGCCACTGGACCTCAAGGTAACACGGGTGCTACTGGTGCCACTGGACCTCGAGGTAACACGGGCGCTACCGGCGCTACTGGACCTCAAGGTAACACGGGTGCTACTGGCGCTACCGGTGCCACTGGACCTCGAGGTAACACGGGTGCTACTGGCGCTACCGGACCTCAAGGTAACACGGGCGCTACTGGCGCTACCGGTGCCACTGGACCTCAAGGTAACACGGGTGCTACTGGCGCTACCGGTGCCACTGGACCTCAAGGTGCTCAAGGTAACACAGGTGCTACTGGTGCTACCGGCGCTACTGGTGCTACTGGACCTCAAGGTGTTCAAGGTAACACAGGTGCTACCGGTGCC

>NZ_CP034551|2|1|3677785-3678478|CRT
ACTGGTGCCACTGGACCT	CGAGGTAACACGGGCGCTACTGGCGCT
ACCGGTGCCACTGGACCT	CGAGGTAACACGGGCGCT
ACCGGTGCCACTGGACCT	CAAGGTAACACGGGTGCTACTGGCGCT
ACCGGTGCCACTGGACCT	CGAGGTAACACGGGCGCT
ACCGGCGCTACTGGACCT	CAAGGTAACACGGTGCTA
CTGGGTGCTACTGGCGCT	GGGTGCCACTGGACCTCGAAGGTAACAT
ACGGGCGCTACTGGCGCT	ACCGGACCTCAAGGTAAC
ACGGGCGCTACTGGCGCT	ACCGGTGCCACTGGACCTCAAGGTAAC
ACGGGTGCTACCGGTGCC	ACTGGACCTCAAGGTAAC
ACGGGTGCTACTGGTGCC	ACTGGACCTCGAGGTAAC
ACGGGCGCTACCGGCGCT	ACTGGACCTCAAGGTAAC
ACGGGTGCTACTGGCGCT	ACCGGTGCCACTGGACCTCGAGGTAAC
ACGGGTGCTACTGGCGCT	ACCGGACCTCAAGGTAAC
ACGGGCGCTACTGGCGCT	ACCGGTGCCACTGGACCTCAAGGTAAC
ACGGGTGCTACTGGCGCT	ACCGGTGCCACTGGACCTCAAGGTGCTCAAGGTAAC
ACAGGTGCTACTGGTGCT	ACCGGCGCTACTGGTGCTACTGGACCTCAAGGTGTTCAAGGTAAC
ACAGGTGCTACCGGTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034551.1\|WP_000504926.1\|3681046_3682000_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
NZ_CP034551.1\|WP_000813896.1\|3680800_3681025_-\|RNA-chaperone-Hfq	unknown	unknown	gnl\|CDD\|179001
NZ_CP034551.1\|WP_000181500.1\|3674963_3675101_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_000450326.1\|3676201_3677167_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP034551.1\|WP_000312258.1\|3674240_3674864_+\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_CP034551.1\|WP_000438178.1\|3675131_3676088_-\|stage-V-sporulation-protein-K	unknown	unknown	gnl\|CDD\|163057
NZ_CP034551.1\|WP_000391393.1\|3672873_3674148_-\|GTPase-HflX	unknown	unknown	gnl\|CDD\|274455
NZ_CP034551.1\|WP_000640859.1\|3685658_3686570_-\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|238570
NZ_CP034551.1\|WP_000734610.1\|3682488_3683439_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|226112
NZ_CP034551.1\|WP_000228315.1\|3688759_3689302_-\|DUF420-domain-containing-protein	unknown	unknown	gnl\|CDD\|225204
NZ_CP034551.1\|WP_011110319.1\|3668667_3669327_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP034551.1\|WP_000814429.1\|3682180_3682426_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_002195769.1\|3689620_3689959_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_000704606.1\|3683788_3685645_-\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|236740
NZ_CP034551.1\|WP_001179093.1\|3687478_3688642_-\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341466
NZ_CP034551.1\|WP_000283431.1\|3668211_3668424_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_000460302.1\|3671609_3672881_-\|methionine-gamma-lyase-family-protein	unknown	unknown	gnl\|CDD\|311036
NZ_CP034551.1\|WP_000656783.1\|3671045_3671435_-\|transcriptional-repressor-GlnR	unknown	unknown	gnl\|CDD\|133380
NZ_CP034551.1\|WP_000092763.1\|3669662_3670997_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NZ_CP034551.1\|WP_000957279.1\|3686566_3687319_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268

Protein	Function_ID	Function_description	E-value
NZ_CP034551.1\|WP_000504926.1\|3681046_3682000_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	1.24401e-165
NZ_CP034551.1\|WP_000813896.1\|3680800_3681025_-\|RNA-chaperone-Hfq	gnl\|CDD\|179001	PRK00395, hfq, RNA-binding protein Hfq; Provisional.	3.4363e-41
NZ_CP034551.1\|WP_000450326.1\|3676201_3677167_+\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.53009e-12
NZ_CP034551.1\|WP_000312258.1\|3674240_3674864_+\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	2.81462e-60
NZ_CP034551.1\|WP_000438178.1\|3675131_3676088_-\|stage-V-sporulation-protein-K	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	1.99085e-156
NZ_CP034551.1\|WP_000391393.1\|3672873_3674148_-\|GTPase-HflX	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	0
NZ_CP034551.1\|WP_000640859.1\|3685658_3686570_-\|1-phosphofructokinase	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	4.42202e-142
NZ_CP034551.1\|WP_000734610.1\|3682488_3683439_-\|SH3-domain-containing-protein	gnl\|CDD\|226112	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown].	1.69797e-36
NZ_CP034551.1\|WP_011110319.1\|3668667_3669327_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	1.58673e-29
NZ_CP034551.1\|WP_001179093.1\|3687478_3688642_-\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	0
NZ_CP034551.1\|WP_000228315.1\|3688759_3689302_-\|DUF420-domain-containing-protein	gnl\|CDD\|225204	COG2322, COG2322, Predicted membrane protein [Function unknown].	9.14687e-57
NZ_CP034551.1\|WP_000704606.1\|3683788_3685645_-\|PTS-transporter-subunit-EIIA	gnl\|CDD\|236740	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional.	1.42815e-142
NZ_CP034551.1\|WP_000460302.1\|3671609_3672881_-\|methionine-gamma-lyase-family-protein	gnl\|CDD\|311036	pfam06838, Met_gamma_lyase, Methionine gamma-lyase. This is a putative pyridoxal 5'-phosphate-dependent methionine gamma-lyase enzyme involved in methionine catabolism.	0
NZ_CP034551.1\|WP_000656783.1\|3671045_3671435_-\|transcriptional-repressor-GlnR	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.14369e-23
NZ_CP034551.1\|WP_000092763.1\|3669662_3670997_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NZ_CP034551.1\|WP_000957279.1\|3686566_3687319_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	7.50492e-83

>NZ_CP034551.1|WP_000450326.1|3676201_3677167_+|site-specific-integrase
METTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDVEDFGHWLEKNKKLPSSNIWATLCTKDYEDYFSDLKTNRHYSEKTMHRVFIVLNRMHHFLNIPNPLKNMEISIQPDRTLRNEDFISPDEEKRLKYIVTSLEGLSEKQLPVRPLLMDRNIAILNLLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTITLAKEDKKQLYNYYKSIPEPVRPKYHSDDPLFVAFDFNRGTYRWVYENDAPKALTEIAIQKMIRLEVARANLRKGISGQHFRNTYILNLIKKETPESEIIKLAGFKSKISLKRYYQYAENRKNALL
>NZ_CP034551.1|WP_000438178.1|3675131_3676088_-|stage-V-sporulation-protein-K
MEQSMRKKNNNQINIVLNHRKKISLPAAENKTVISNETTIKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLKSEKQVLHMLFKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTRDLIKKAMGGILFIDEAYSLARGGEKDFGKEAIDTLVKHMEDKQHGFVLILAGYSREMNHFLSLNPGLQSRFPFIIEFADYSVNQLLEIGKRMYEEREYQLSKEAEWKFRDHLHAVKYSSQITSFSNGRYVRNIVEKSIRTQAMRLLQEDAYDKNDLIGISSMDLMLEEETHST
>NZ_CP034551.1|WP_000181500.1|3674963_3675101_+|hypothetical-protein
MTNHVNKGAQKSSVNQFGHDPNSAHEKSAKMEHFHKAHQEKAKKE
>NZ_CP034551.1|WP_000312258.1|3674240_3674864_+|trimeric-intracellular-cation-channel-family-protein
MAWEIFSIIGTIAFALSGAIIAMEEDYDIFGVYILGMATAFGGGALRNLLIGYPIVAFWQQDMLFQIALLSMTIIFLFPNKLIRHWKKWENITDAIGLSAFAVQGALYAQKLNLPISATIVAAVLTGIGGGIIRDLLARRKPLVLRAEVYAFWTILAGFLIGAQIIVSDWALYILFILIVCFRMVSIHYKWHLPHRRIETKERSMHK
>NZ_CP034551.1|WP_000391393.1|3672873_3674148_-|GTPase-HflX
MEEKEKVILVGCQLPQDDDEKFMHSMKELASLAKTARAELLVSTTQKRPKFHPATYIGKGKLEELTMLTEELEPDVIVFNNELTPSQIRNLSSVLDARVIDRTQLILDIFAQRAKSREGKLQVELAQLQYTMPRLMGQGLSLSRLGGGIGTRGPGETKLETDRRHIRSRIDEIKKQLAVVVEHRKRYRERRKDNKVFQVSLIGYTNAGKSTLFNRLTEADTFEENLLFATLDPTTRKMPLPSGYTVLLTDTVGFIQDLPTSLIAAFRSTLEEAGEADVILHVVDSADPNYIGHEKTVKRLLSELEINHIPIITLYNKKDELHQNFIPFPKSDFLMTSAFEESDVLRIKEAIEMKMKKEMDRYRVEIPPSEGKLLTLLKTETLLAKMEFLEDKFVYDCAGYIFTHSSLNVQLKRFLVEEGENKNV
>NZ_CP034551.1|WP_000460302.1|3671609_3672881_-|methionine-gamma-lyase-family-protein
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDELIEKNLLTIS
>NZ_CP034551.1|WP_000656783.1|3671045_3671435_-|transcriptional-repressor-GlnR
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLVSPTRTKGNRRLFSFNDVDKLLEIKDLLDQGLNMAGIKQVLLMKENQTEAVKVKEETKEISKTELRKILRDELQHTGRFNRTSLRQGDISRFFH
>NZ_CP034551.1|WP_000092763.1|3669662_3670997_-|type-I-glutamate--ammonia-ligase
MSRYTKEDIFRLAKEENVKYIRLQFTDLLGVIKNVEIPVRQLTKALDNKMMFDGSSIEGFVRIEESDMYLYPDLDTWVIFPWTAEKGKVARLICDIYNADGTPFDGDPRNNLKRVLKEMEALGFSDFNLGPEPEFFLFKVDEKGNPTLELNDNGGYFDLAPMDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYANAIRSCDDIQTFKLVVKTIARKHGLHATFMPKPLYGVNGSGMHCNLSLFKNGENVFFDANGDLQLSDDARHFIAGILKHAPAFTAIANPTVNSYKRLVPGYEAPCYVAWSAQNRSPLVRIPASRGISTRVEVRSVDPAANPYLVMATLLAAGLDGIKNKLTPPAAVDRNIYVMTKEEREEAGIVDLPATLAQALVTLQSNEVVCGALGEHLLEHFIEAKEIEWDIFRTQVHQWERDQYMSLY
>NZ_CP034551.1|WP_011110319.1|3668667_3669327_+|helix-turn-helix-domain-containing-protein
MKKAEVVTRLIKEAGYSKRAFAEKIGLPPTTLQSMLSRGIGKASVDNVIKVCKGLGITTDDLERLATQEDNTVKEEVSIYETIQNDQSNIIYIPIIGSVAAGTPILAEENIEGYLPMLSTFLNKRKKYFYLTVKGTSMNLEFPDGSYVLVEETPYVENGQIAVVKVNGYDATVKKISKSGSIITLIPLSNDPIHEPKTYDLSAEDVKIIGRVVQAVKNY
>NZ_CP034551.1|WP_000283431.1|3668211_3668424_-|hypothetical-protein
MYPNLRAEMARKRIMITQISSHLKLRHATVSDKINGKFRFYYDEAFEIKKTFFPEHSLEYLFEFEENEAN
>NZ_CP034551.1|WP_000813896.1|3680800_3681025_-|RNA-chaperone-Hfq
MKQSINIQDQFLNQLRKENTFVTLYLLNGFQLRGLIKGFDNFTVLLETEGKQQLIYKHAISTFVPQKNVSIELE
>NZ_CP034551.1|WP_000504926.1|3681046_3682000_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MGEVQREKVAVIIGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTKAEMDGIPHYMIDIKNPEDSFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFDYQFTDDAGDVIYREQMEKLALERGVEYVHEKLQEVDPESAERIHANNVRRVIRALEIFHTTGEKMSEQIEKQEKELLYDVSLIGLTMDREMLYDRINLRVDLMMEQGLLEEVEGLYNRGIRDCQSIQAIGYKEIYDYFENRASLEDAVSQLKTNSRRYAKRQLTWFRNKMDVTWFDVTDGEKTSEILRYIEGKLQVKSNNSK
>NZ_CP034551.1|WP_000814429.1|3682180_3682426_+|hypothetical-protein
MKQSTINFSSLTKDLILATSTKEQNCSQEELYFALNCLLRAFHSTLHETTLHPENKNTEYIQTQFCSAYKIITGKTIYPFQ
>NZ_CP034551.1|WP_000734610.1|3682488_3683439_-|SH3-domain-containing-protein
MKKLLGIATAAVFGLGIFAGSAKAETIVTTDVLNVRENPNVESKLVGKVFSGNTLDVINTENGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAPVIEKKEVVAQEEAPARTNTPVKNNTVVKNKESVKSNDSIKNVESSKPVVKEKPAAKPVAKSTETSAPTGGREITVEATAYTADPSENGSYGGRVLTAMGHDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSWGRKSVKVKVIQ
>NZ_CP034551.1|WP_000704606.1|3683788_3685645_-|PTS-transporter-subunit-EIIA
MKITELLKRDTVIMDLTASNKEAVIDELVEKLNGANRLNSKTEFKEAILKREAQSTTGIGEGIAIPHAKTKAVKQPSICFGRSVSGINYESLDGQPAHLFFMIAASEGANNTHLETLSRLSTLLMDEGFRKQLLEAKDESELLQLFDEKENEKEEEIEVAKPEGNEPYVLAVTACPTGIAHTYMAADSLKAKATELGIAIKVETNGSTGIKNGLTKEDIERATAIIVAADKQVEMNRFAGKHVIQVPVADGIRKTENLLKRAVKQDAPIFKGVKEDGKSESIEGEKGLGIYKHLMSGVSNMLPFVVGGGILIALAFSFGGIKAEGPLAELFMSIGGGKTGAFLFLVPILAGFIASSIADRPGFMPGVVGGFLAANANAGFLGGLIAGFLAGYVVLGLKRLFSGLPVQLEGIKPVLLYPVFGLLITGVVMQKVVIPPVVALNEMLTGWLNGLNGTNAILLGLILGGMMAIDMGGPINKAAFTFGIAAIEAQNFGVHSAVMAGGMVPPLAIAFATTFFKSKFTEAERKSGLTNYIMGASFITEGAIPFAAADPVRVIVSCVVGSSIAGALSMLFQITLPAPHGGLFVIALVNKPLLYIFSILIGTIVSAVTLGVWKKKVQ
>NZ_CP034551.1|WP_000640859.1|3685658_3686570_-|1-phosphofructokinase
MIYTVTLNPSIDYVVQVSSFDLGTINRAEKDMKFPGGKGINVSRVLQRLGVKNIALGFTGGFTGQFIKEVLQTEGVTTNFVQVDEDTRINVKIKGEEETELNGQGPIVTKEQFEQLMKKIESMQPGDCVVLAGSVPVSIPSTFYESIAAFGAEKGIRVVVDASGSALQHVIKNKPFLIKPNHHELGELFGVELSTVEDVLPYGRKLIEQGVKHVIVSMAGEGALLFTAEGIYEATVPKGVVINSVGAGDSLVAGFVGKYEQTKDIEKAFQYGVATGSATAFSADLCKKEKVEELLSQVIVAKR
>NZ_CP034551.1|WP_000957279.1|3686566_3687319_-|DeoR/GlpR-transcriptional-regulator
MLTPERHQMILQLVKEQKVVKLQQLVERTESSESTIRRDLAQLEKQRLLKRVHGGAAVLTGKGQEPTMVEKSSKNIQIKQQIAKYAASVIEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRAYLLGGMMKSRTKALIGAMAQESMQKYRFDKCFLGANGVHEQLGFTTPDPEEALLKQMALTLANEGYFLIDESKFSEVAFAKIANVEDANIITNHLEIDLEKYKQQTNVIEADKQ
>NZ_CP034551.1|WP_001179093.1|3687478_3688642_-|iron-containing-alcohol-dehydrogenase
MQNFVFRNPTKLIFGKGQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKDINAEVFELTGVEPNPRVSTVKKGIQICKENGVEFILAVGGGSVIDCTKAIAAGSKYDGDVWDIVTKKTFANEALPFGTVLTLAATGSEMNAGSVITNWETNEKYGWGSPVTFPQFSILDPVHTTSVPKDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCEAVLKTVIETAPKLLSDLENYEHRETILYCGTMALNGILAMGVKGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVEGNVSRFKQFAIRVFNVETDGKTDREIALEGIQALRQFWTSIEAPVTLSDYAIGENEIDLMADKAMAYGEFGNFKKLNKDDVLSIYKASL
>NZ_CP034551.1|WP_000228315.1|3688759_3689302_-|DUF420-domain-containing-protein
MVDQSTNQKSYAPIVITLSVIVNAIILFLFFGPVGYEGEVHFDVTILPMLNAIFNSFTFVFLLAALFSIIKKNVKMHRGFILAAFTTTLLFCVSYLSYHYLAPATHFGGEGFIKYVYFIILITHIILAAIIVPLALFALVFGFTNQLTRHRKIVRWTMPIWLYVSLSGVIVYLMISPYYQ
>NZ_CP034551.1|WP_002195769.1|3689620_3689959_-|hypothetical-protein
MVKKEGGMMMEEYVLELYNLLYTTEWQDIVSFLGIVFCMKIVIVYMEEQGMFYSFSSPFDVQRESLLNYANVNYEQFPFVVFFMIRFITAIVRKKESDDEECHSTCKVANVF

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Crispr_ID: NZ_CP034551_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034551_3

5197293-5197426

Orphan

Consensus_repeat	Method
GTTGATTTCTCTTCTTTTTGAGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP034551_3

>merge|NZ_CP034551|3|5197293-5197426|CRISPRCasFinder
GTTGATTTTTCTTCTTTCTTCGGTTCTTCTTTTTTGTCACTAGTTGAACCGCTTGTTGATTTCTCTTCTTTTTGAGACTTGTCTTCTGTTTTACTTTCCGGTTTCGTGCTCGTTGACTTCTCTTCTTTTTGAGA

>NZ_CP034551|3|2|5197293-5197426|CRISPRCasFinder
GTTGATTTTTCTTCTTTCTTCGG	TTCTTCTTTTTTGTCACTAGTTGAACCGCTT
GTTGATTTCTCTTCTTTTTGAGA	CTTGTCTTCTGTTTTACTTTCCGGTTTCGTGCTC
GTTGACTTCTCTTCTTTTTGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034551.1\|WP_011110492.1\|5190764_5191532_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|226870
NZ_CP034551.1\|WP_000008901.1\|5196970_5197105_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034551.1\|WP_001185912.1\|5200042_5201050_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP034551.1\|WP_000467955.1\|5193341_5194019_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP034551.1\|WP_033685340.1\|5187764_5189573_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP034551.1\|WP_000057889.1\|5204476_5204713_-\|DUF1146-domain-containing-protein	unknown	unknown	gnl\|CDD\|227173
NZ_CP034551.1\|WP_002005985.1\|5203720_5204431_-\|YwmB-family-TATA-box-binding-protein	unknown	unknown	gnl\|CDD\|370056
NZ_CP034551.1\|WP_000393128.1\|5192334_5193078_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226453
NZ_CP034551.1\|WP_000672662.1\|5201150_5202170_-\|stage-II-sporulation-protein-D	unknown	unknown	gnl\|CDD\|274332
NZ_CP034551.1\|WP_000544012.1\|5196389_5196662_-\|sporulation-transcriptional-regulator-SpoIIID	unknown	unknown	gnl\|CDD\|378813
NZ_CP034551.1\|WP_000757832.1\|5189634_5190516_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP034551.1\|WP_001207193.1\|5191643_5192345_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP034551.1\|WP_000411274.1\|5202376_5203681_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_CP034551.1\|WP_000931959.1\|5194363_5194798_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP034551.1\|WP_000568230.1\|5207936_5209799_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_CP034551.1\|WP_000170865.1\|5199018_5199861_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP034551.1\|WP_000457978.1\|5195227_5196229_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|237563
NZ_CP034551.1\|WP_000144450.1\|5198314_5199019_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP034551.1\|WP_000367459.1\|5204915_5206436_-\|NADH-quinone-oxidoreductase-subunit-NuoN	unknown	unknown	gnl\|CDD\|235603
NZ_CP034551.1\|WP_000998926.1\|5206437_5207940_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622

Protein	Function_ID	Function_description	E-value
NZ_CP034551.1\|WP_011110492.1\|5190764_5191532_-\|tyrosine-protein-phosphatase	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.30108e-105
NZ_CP034551.1\|WP_000393128.1\|5192334_5193078_-\|capsular-polysaccharide-biosynthesis-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	9.79397e-84
NZ_CP034551.1\|WP_001185912.1\|5200042_5201050_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.6532e-32
NZ_CP034551.1\|WP_033685340.1\|5187764_5189573_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP034551.1\|WP_000998926.1\|5206437_5207940_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	2.00709e-177
NZ_CP034551.1\|WP_002005985.1\|5203720_5204431_-\|YwmB-family-TATA-box-binding-protein	gnl\|CDD\|370056	pfam08680, DUF1779, TATA-box binding. TATA-box_bdg is a family of bacterial proteins. YwmB from Bacillus subtilis contains a circularly permuted TATA-box binding protein-like fold. Jian-Xiang Liu, Qi Xie, Jun Lin. Protein Structural Data Mining and Evolutionary Bioinformatic Analysis on Domains of TATA-box Binding Protein-like Fold. Life Science Journal 2014; 11(2): 298-302 (not yet in PubMed 27-02-2014).	5.16446e-34
NZ_CP034551.1\|WP_000057889.1\|5204476_5204713_-\|DUF1146-domain-containing-protein	gnl\|CDD\|227173	COG4836, COG4836, Predicted membrane protein [Function unknown].	1.23409e-23
NZ_CP034551.1\|WP_000672662.1\|5201150_5202170_-\|stage-II-sporulation-protein-D	gnl\|CDD\|274332	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination].	4.7774e-134
NZ_CP034551.1\|WP_000544012.1\|5196389_5196662_-\|sporulation-transcriptional-regulator-SpoIIID	gnl\|CDD\|378813	pfam12116, SpoIIID, Stage III sporulation protein D. This stage III sporulation protein is a small DNA-binding family that is essential for gene expression of the mother-cell compartment during sporulation. The domain is found in bacteria and viruses, and is about 40 amino acids in length. It has a conserved RGG sequence motif.	1.17272e-38
NZ_CP034551.1\|WP_000757832.1\|5189634_5190516_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	0
NZ_CP034551.1\|WP_000467955.1\|5193341_5194019_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	4.05004e-82
NZ_CP034551.1\|WP_000411274.1\|5202376_5203681_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP034551.1\|WP_000931959.1\|5194363_5194798_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	5.26499e-95
NZ_CP034551.1\|WP_000568230.1\|5207936_5209799_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_CP034551.1\|WP_000170865.1\|5199018_5199861_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.37567e-89
NZ_CP034551.1\|WP_000457978.1\|5195227_5196229_-\|rod-shape-determining-protein	gnl\|CDD\|237563	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional.	0
NZ_CP034551.1\|WP_000144450.1\|5198314_5199019_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	5.76202e-05
NZ_CP034551.1\|WP_000367459.1\|5204915_5206436_-\|NADH-quinone-oxidoreductase-subunit-NuoN	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	4.09428e-151
NZ_CP034551.1\|WP_001207193.1\|5191643_5192345_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	4.59934e-83

>NZ_CP034551.1|WP_000008901.1|5196970_5197105_-|hypothetical-protein
MSFLFVLSTAIILLFVLFTLYYYIAGKKEVPHHQLLEEEFEREE
>NZ_CP034551.1|WP_000544012.1|5196389_5196662_-|sporulation-transcriptional-regulator-SpoIIID
MHDYIKERTIKIGKYIVETRKTVRVIAKEFGVSKSTVHKDLTERLPEINPELANEVKEILDYHKSIRHLRGGEATKQKYRKEDVEKPVRQ
>NZ_CP034551.1|WP_000457978.1|5195227_5196229_-|rod-shape-determining-protein
MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVAIDRNSGKVLAVGEEARSMVGRTPGNIVAIRPLKDGVIADFEITEAMLKYFINKLDVKSFFSKPRILICCPTNITSVEQKAIREAAERSGGKTVFLEEEPKVAAVGAGMEIFQPSGNMVVDIGGGTTDIAVLSMGDIVTSSSIKMAGDKFDMEILNYIKRKYKLLIGERTSEDIKIKVGTVFPGARSEELEIRGRDMVTGLPRTITVCSEEITEALKENAAVIVQAAKGVLERTPPELSADIIDRGVILTGGGALLHGIDMLLAEELKVPVLIAENPMHCVAVGTGIMLENIDRLPKRALR
>NZ_CP034551.1|WP_000931959.1|5194363_5194798_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MLNIEQIKEIIPHRYPFLLVDKILEVDEGKRAVGIKNVSANEEFFNGHFPDYAVMPGVLIVEALAQVGAVAVLKKEENRGRLAFFAGIDNCRFKKQVRPGDQLRLEVEMTRVRGPIGKGKAIATVDGEVACEAEITFAIGDKKE
>NZ_CP034551.1|WP_000467955.1|5193341_5194019_-|CpsD/CapB-family-tyrosine-protein-kinase
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHVRSIIVTSADPGDGKTTTISNLAVVFGQQGKKVLLIGADLRKPTIQNLFAIHSSNGLTNLLSGQAKLMQCIQKTDIENVYLMAAGPIPPNPAELLGSRAMDEALLEAYNMFDIILIDTPPVLAVTDAQILANKCDGIVLVVRSEKTEKDKIVKAKQILDKASGKILGVVLNDKREEKEQYGYY
>NZ_CP034551.1|WP_000393128.1|5192334_5193078_-|capsular-polysaccharide-biosynthesis-protein
MEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGAAIQLGEIQSNIQLTNTYKVIIKSPVILDRVNEKLNLNMTAQALTKKINIANEKDSQVISVTAEDKDPKLARDIANATADVFKDEVAKIMNVDNVTVLSKAEVAENQSPIKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETMNVKSHAPSSRKVRGQTIGS
>NZ_CP034551.1|WP_001207193.1|5191643_5192345_-|CpsD/CapB-family-tyrosine-protein-kinase
MALNLFKKKKSHRQRRQLIAHQQPKSPISEQYRNIRTNIEFAAIDMNLHSLLVTSANPSEGKTTTTANMAVVFAQQGKKVLLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQTTSIDNLSFLACGPIPPNPAELLGSKSMKELLGQAYSMYDLVIFDMPPILAVTDAQIMANVCDASILVVRSESTEKETAVKAKGLLESANGKLLGVVLNDREREQGLYYYYGAN
>NZ_CP034551.1|WP_011110492.1|5190764_5191532_-|tyrosine-protein-phosphatase
MIDLHCHILPGIDDGAQTVTDSLAMAQKAASEGIHTIVATPHHQNGKYVNERTPIIHHVKQLNDELQQHNIPLTILPGQEVRLYGDLLEDYEAGKIVTLNETNKYIFIEFPSNHVPRYAEQLLYELRVKGMIPIIVHPERNAELIERPDKLYNIVNKGALTQVTAGSLLGKFGKKIKKFSLQLVEHNLTHMIASDAHNTTSRGFHLAESYELIEKEFGMNVMGDLKENPYLVISGKTIYKEDPEQIRRKKLFGIF
>NZ_CP034551.1|WP_000757832.1|5189634_5190516_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKVRKAIIPAAGLGTRFLPVTKAMPKEMLPIVDKPTIQYIVEEAIESGIEDIIIVTGKGKRAIEDHFDHSFELEQSLLEKGKHEMLEKVQASSKINIHYIRQKEPKGLGHAVWCARKFIGNEPFAVLLGDDIVQAETPCLRQLMDQYEGTQSSVIGVQTVPENETHRYGIIDPVEQNDRRYQVRQFVEKPEQGTAPSNLAIMGRYVLTPEIFMFLENQQTGAGGEIQLTDAIQRLNEVQRVFAYDFKGTRYDVGEKFGFIKTTIEMALQNEELNVELMKYMKELVKKEEVHS
>NZ_CP034551.1|WP_033685340.1|5187764_5189573_-|polysaccharide-biosynthesis-protein
MSYRRRLSLLILLDSFIVLTAVYLSYWFIHPNVLNKIPMTVVISSITLLCSHHVFAAIYKLYNKAWEYASIGELKQIFKAITLSILVTAIVQQIINHDIYVRILAIAWMLHLLLIGGSRFVWRMFRDTYITKATDKKRTLIIGAGSAGTMVVRQLQHNKEADLYPIAFVDDDRNKQKLEIYNVPVIGTTNHIQEIVEDNDIEHIIIAIPSLNRGQINEIFEKCRKTKAKTQIVPMLEDLLDGKVSVNEFRDVQVEDLLGREPVQLDDKGIGEKIQDKTVLITGAGGSIGSEICRQILKYKPAKMVLLGHGENSIYHIEMELRTKYKEQAEFVTEIADIQDRNKIFEIMKKHKPFVVYHAAAHKHVPLMERNPEEAVKNNIIGTKNVAEAADTFGINTFVMVSTDKAVNPTNVMGATKRVAEMVVQHMAMISQTRFVAVRFGNVLGSRGSVIPLFKKQIQSGGPVTVTHPDITRYFMTIPEASRLVIQAGSLARGGELFVLDMGEPVKIADLAKNLIQLSGYSIEEIGIEYSGLRPGEKMYEELLNDNEIHKEQVFPKIHIGKAVLKDFESIQQFIDEFEQMSQESIRKTLLDFANNKVEVNS
>NZ_CP034551.1|WP_000144450.1|5198314_5199019_-|ABC-transporter-permease
MTFSMRRVSAIFRKEVQDFKTNSQVLLMAFLPIILSFLFSRFGVGKEMLGITTITAFLFVAGFVQSMVIAEEKEKHTLRVLMLSPASSVEVLLGKSLLTSGLTMVICIANLFILDQLNINLPLVGLIFLCGTILFIVLGTMIGLLASSVPQTSIIGMPILMTMYLAVQFEPMVENKVIKTMIGYLPTSHIVKALKSLVGGAGFSSISGHVLNVAVWLIISLVVCLIVYKKKQLD
>NZ_CP034551.1|WP_000170865.1|5199018_5199861_-|ABC-transporter-ATP-binding-protein
MTLAIEMKDVMKSFSGKTALRNVNIEVKQGEIFGFLGPSGSGKTTTVKILTSQLLHSVGTVRVLGKDITGPSSIDYKRIGILTDNSGLYERLSIYDNLLLFCDLYDCKKERIDEVLTQVNLLDDKKTPVKKLSKGMKQRVTLARAILHKPDILFLDEPTSALDPVNVQNIHKILKDLNEEGTTIFLTTHNMDEAETLCNRIAFLCGGEIVALDTPENLRLQYAKDQIEVVLKGKRKEVVQKDELGAKRISEWMNKGELLSIHSHEPTLGDIFIEVTGRGL
>NZ_CP034551.1|WP_001185912.1|5200042_5201050_-|ATP-binding-cassette-domain-containing-protein
MALLELKQLGKANQLPAIELEVEKGQCIVLQCNNHTAKVLHRIIIGEEEASTGNVLFEGEAIGKKNYSRIGFCFLKDEAYDRLKVKEYFKFLLGLYESKISIEEVVQSVGLLDKLNVKIEKLSFSEKRRLHIGRVMIHNPDLIILEEPEQNVDIESTVIIRKAIMKMKEQGKAIFITSSFLSDALSLTEDVYILNNDGVKKVEIEQEEAEKVDEEKVVQIIPQMKLERIPAKVNDKIILLDPMEIHFIETQNGVTHIHVREGDFVCALTLSELEERLTGFGFFRCHRSYLVNLQRVREVITWTRNSFSLILDDERKSSIPLSKGRMDELKGVIGL
>NZ_CP034551.1|WP_000672662.1|5201150_5202170_-|stage-II-sporulation-protein-D
MKFSKPLFITVALLIALVIIVPAALVIPFAKAKVGEETASKTPPAIESIPAPGKVDTAVQVAVYREKQKKVETLPVEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTVKDQVYKSKDELKKQWGNNYENNLKKIEEAVSKTAGQVLTYDGKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNIKDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFTWKQQGDKIIVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVAIKTMNDYEGKLMVKK
>NZ_CP034551.1|WP_000411274.1|5202376_5203681_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MEKIIVRGGKRLNGTVRVEGAKNAVLPIIAAALLASDGKNVLSEVPVLSDVYTINEVLRHLNAEVVFENNQVTIDSSKELNIEAPFEYVRKMRASVQVMGPLLARNGRARIALPGGCAIGSRPIDQHLKGFEAMGAKVQVGNGFVEAYVEGELKGAKIYLDFPSVGATENIMSAATLAKGTTILENAAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDKLYGANHSIIPDRIEAGTFMVAAAITGGDILIENAVPEHLRSITAKMEEMGVKIIEENEGVRVIGPDKLKAVDIKTMPHPGFPTDMQSQMMALLLQADGTSMITETVFENRFMHVEEFRRMNADIKIEGRSVIMNGPNSLQGAEVAATDLRAAAALILAGLVSEGYTRVTELKHLDRGYVNFHKKLAALGATIERVNEKVEEVKEQEVSDLHA
>NZ_CP034551.1|WP_002005985.1|5203720_5204431_-|YwmB-family-TATA-box-binding-protein
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIKALEKNDAKVEKWSWLARETKTISNIHTFQKLLNDVKEKANIQKWEVEQSPDGYKATSYKKLSSYEERVVVTWSKENTKENTFIIFEVSGAKWDPKYVQNMNKIFSEKPIIYTCVQGVLNDKIEGVLQNKTNQVLKDLSARAIEQVEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY
>NZ_CP034551.1|WP_000057889.1|5204476_5204713_-|DUF1146-domain-containing-protein
MAQLLGQQALIAIVSHLLFITITWWALQGIHIERLMKSGKVLQTRVLLILITIAIGTSVSNFFLDYLGYSKSLTYLVK
>NZ_CP034551.1|WP_000367459.1|5204915_5206436_-|NADH-quinone-oxidoreductase-subunit-NuoN
MDMNTLFSLSWHLMVPEFIILGAAILLSICDLFFKLNHRYVALGAIAAIVLAIVSLITLYSEPAGDILNGSFVLDGFSKGFKTLLLGASALILCTAMSDDKKNPIEDKGEYYYLFLMALLGAMFMASSVDFITLFVGLELLSLSSYILVGIRKKSRASNEAAMKYVISGGIGTAITLFGMSYLYGITGSTNIVDMQKVLTGELASGIQLLLALAFLLLLVGLSFKIATVPFHMWAPDVYEGAATPVTAFLGTISKIAGFLLIIRLFLMIFASVLIQGDMQSLYGHMSIYIAVLASITMIVGNVVALKQYNIKRLFAYSGIAHAGYLLVPLVALSPFTMDSMWFYMLAYMLMNIGAFAIIHGLILQNNEENITIFTGLYKRSPFTAIMMTIFILSLAGIPGTAGFIGKINIFLGALHVEPAHYVLASIMMGTTVVSFVYYFRILQQMFFRTGETEERIRLPLNIKVVMSLCAISIVILGIMPMIGYNFFYEYFPLMKDFFFLGNVVQ
>NZ_CP034551.1|WP_000998926.1|5206437_5207940_-|NADH-quinone-oxidoreductase-subunit-M
MNDLLLTFFIFSPLLGILLLVLTPKKELRTVRALGLFGTALPFGIAIVLACTYASGKNLSLFDEKMKWIKFGDFTAVDKRWFSIYYELGIDGLSLVMMVLTALLATLAAIAAFSIKRNLKAFYMLLLMLEIGMLGVFAAQNLMLFFIFFEITLPPMFLLIGKWGKLSSEKAAYSYLIYNGIGSAILLIVFSILFAKTGTTNIVELKEILRSVNAEGALVIPSSLQLSVFIAIMIAFAIKLPVFPLHRWMVNVHIEAHPAVVMLHAGVLLKIGAYGIIRFGKGLFPEYFHDVATLIAILGVINLLYGAFLALIQTDFRKVLAYSSISHMGIVLMGLASLNAPGTQGALFQVVSHGLIAALLFFLLGVIEQRFGTSDITALGGLAKSVPVLSGFFLAGGMASLGLPGMSGFVSEFLAFLGLFQGEPVIAAVGVIGIILTAVYVLRATLQVTFGKKEWEAKYDIHGWEYVPVLLLIFCIIAIGVMPEILGDPLQNTLKTLGVK
>NZ_CP034551.1|WP_000568230.1|5207936_5209799_-|NADH-quinone-oxidoreductase-subunit-L
MIDYAWLIPLFPLVSFLLLIIFGKKIREGSSVLSIFFVFLSFILAVLVLIERFSEASVKHKWVWLRAGDVDISFGFEVTALGALMLFIVTLVSLLVHVYSKGYMKGDERLPTFYAYLGLFTFAMLGLVISTNLLQLYIFWELVGLGSFLLIGFYFFKEEAKAAAKKAFIMTRIGDVGLFIGMILIFWYAGSFEYDAIFRAIYTGDLPPYMITITAILIFIGAMGKSGQFPLHTWLPDAMEGPTPVSALIHAATMVAAGVYLVATMFPLFSASTVAMQTVAIVGAFTAIFAASIGLVQTDIKRVLAYSTVSQLGYMMLALGSAGYVAGIFHLTTHAFFKALLFLAAGSVIHAVHTQNINKMGGLQKKMKVTGTLFLIGTLAISGVPLLSGFFSKDEILAATWMNGNYVLFTLAVIAAFLTAFYMFRLYFLVFTGETKTKEEVHESPRVMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTKDVGFKVEETHGPVWIMIVATLVSFAGIALAYFIYRKKSISRNWAGGTETSLYNLLKEKYYVDELYNMTVIPITKGIAHVLRLFEVYVVEGIAVLIASVVKGTSNLGSKLQNGNVQVYGTVTVVSLAVLVIILLYTGGDLR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3680036-3680062	0	1.0
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678695-3678721	1	0.963
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3679019-3679045	1	0.963
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3679550-3679576	1	0.963
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3679604-3679630	1	0.963
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3680126-3680152	1	0.963
NZ_CP034551_2	2.15\|3678362\|36\|NZ_CP034551\|CRT	3678362-3678397	36	NZ_CP034551.1	3679577-3679612	1	0.972
NZ_CP034551_2	2.15\|3678362\|36\|NZ_CP034551\|CRT	3678362-3678397	36	NZ_CP034551.1	3679631-3679666	1	0.972
NZ_CP034551_2	2.15\|3678362\|36\|NZ_CP034551\|CRT	3678362-3678397	36	NZ_CP034551.1	3680063-3680098	1	0.972
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678560-3678586	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678650-3678676	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678740-3678766	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678785-3678811	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678830-3678856	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3678875-3678901	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3679172-3679198	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3679388-3679414	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3679766-3679792	2	0.926
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	NZ_CP034551.1	3680180-3680206	2	0.926
NZ_CP034551_2	2.15\|3678362\|36\|NZ_CP034551\|CRT	3678362-3678397	36	NZ_CP034551.1	3680153-3680188	2	0.944
NZ_CP034551_2	2.16\|3678416\|45\|NZ_CP034551\|CRT	3678416-3678460	45	NZ_CP034551.1	3678659-3678703	2	0.956

1. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3680036-3680062, mismatch: 0, identity: 1.0

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacgggtgctactggcgct	Protospacer
***************************

2. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678695-3678721, mismatch: 1, identity: 0.963

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggcgct	Protospacer
***********.***************

3. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3679019-3679045, mismatch: 1, identity: 0.963

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggcgct	Protospacer
***********.***************

4. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3679550-3679576, mismatch: 1, identity: 0.963

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggcgct	Protospacer
***********.***************

5. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3679604-3679630, mismatch: 1, identity: 0.963

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggcgct	Protospacer
***********.***************

6. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3680126-3680152, mismatch: 1, identity: 0.963

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggcgct	Protospacer
***********.***************

7. spacer 2.15|3678362|36|NZ_CP034551|CRT matches to position: 3679577-3679612, mismatch: 1, identity: 0.972

accggtgccactggacctcaaggtgctcaaggtaac	CRISPR spacer
accggtgccactggacctcaaggtgttcaaggtaac	Protospacer
*************************.**********

8. spacer 2.15|3678362|36|NZ_CP034551|CRT matches to position: 3679631-3679666, mismatch: 1, identity: 0.972

accggtgccactggacctcaaggtgctcaaggtaac	CRISPR spacer
accggtgccactggacctcaaggtgttcaaggtaac	Protospacer
*************************.**********

9. spacer 2.15|3678362|36|NZ_CP034551|CRT matches to position: 3680063-3680098, mismatch: 1, identity: 0.972

accggtgccactggacctcaaggtgctcaaggtaac	CRISPR spacer
accggtgccactggacctcaaggtgttcaaggtaac	Protospacer
*************************.**********

10. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678560-3678586, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctaccggcgct	Protospacer
***********.********.******

11. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678650-3678676, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggtgct	Protospacer
***********.***********.***

12. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678740-3678766, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctaccggcgct	Protospacer
***********.********.******

13. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678785-3678811, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctaccggcgct	Protospacer
***********.********.******

14. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678830-3678856, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctaccggcgct	Protospacer
***********.********.******

15. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3678875-3678901, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctaccggcgct	Protospacer
***********.********.******

16. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3679172-3679198, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggtgct	Protospacer
***********.***********.***

17. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3679388-3679414, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggtgct	Protospacer
***********.***********.***

18. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3679766-3679792, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggtaacacaggtgctactggtgct	Protospacer
***********.***********.***

19. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to position: 3680180-3680206, mismatch: 2, identity: 0.926

caaggtaacacgggtgctactggcgct	CRISPR spacer
caaggcaacacaggtgctactggcgct	Protospacer
*****.*****.***************

20. spacer 2.15|3678362|36|NZ_CP034551|CRT matches to position: 3680153-3680188, mismatch: 2, identity: 0.944

accggtgccactggacctcaaggtgctcaaggtaac	CRISPR spacer
accggtgccactggacctcaaggtgttcaaggcaac	Protospacer
*************************.******.***

21. spacer 2.16|3678416|45|NZ_CP034551|CRT matches to position: 3678659-3678703, mismatch: 2, identity: 0.956

accggcgctactggtgctactggacctcaaggtgttcaaggtaac	CRISPR spacer
acaggtgctactggtgctactggacctcaaggtgttcaaggtaac	Protospacer
** **.***************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP034551_2	2.1\|3677803\|27\|NZ_CP034551\|CRT	3677803-3677829	27	AP014693	Ralstonia phage RSL2 DNA, complete sequence	152474-152500	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MT380195	Klebsiella phage KP_LZD_B01, complete genome	76463-76489	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MT380195	Klebsiella phage KP_LZD_B01, complete genome	78599-78625	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	KX845404	Klebsiella phage vB_Kpn_IME260, complete genome	80968-80994	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	KX845404	Klebsiella phage vB_Kpn_IME260, complete genome	83104-83130	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MG676223	Vibrio phage ValSw3-3, partial genome	1360-1386	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MN163280	Klebsiella phage KpGranit, complete genome	83369-83395	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MN163280	Klebsiella phage KpGranit, complete genome	84572-84598	4	0.852
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MN101228	Klebsiella phage KPN4, complete genome	27724-27750	5	0.815
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MH171094	Streptomyces phage Nabi, complete genome	17441-17467	5	0.815
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	KX507343	Streptomyces phage Lorelei, complete genome	17441-17467	5	0.815
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MH171093	Streptomyces phage Rana, complete genome	17441-17467	5	0.815
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MN434096	Klebsiella phage JIPh_Kp127, complete genome	81951-81977	5	0.815
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MN163280	Klebsiella phage KpGranit, complete genome	81266-81292	5	0.815
NZ_CP034551_2	2.3\|3677884\|27\|NZ_CP034551\|CRT	3677884-3677910	27	MK613348	Roseobacter phage CRP-6, complete genome	35667-35693	5	0.815
NZ_CP034551_2	2.6\|3678001\|28\|NZ_CP034551\|CRT	3678001-3678028	28	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	65420-65447	5	0.821
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MN586053	Arthrobacter phage BeatusComedenti, complete genome	29810-29836	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	AP013411	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43	29806-29832	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	AP013669	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, * SEQUENCING IN PROGRESS *	3673-3699	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MN693092	Marine virus AFVG_25M37, complete genome	19115-19141	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	NC_031231	Arthrobacter phage KellEzio, complete genome	29812-29838	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MN497953	Mycobacterium phage GtownJaz, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH020238	Mycobacterium phage Lilith, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH077583	Mycobacterium phage PGHhamlin, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH727554	Mycobacterium phage MuchMore, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH338240	Mycobacterium phage Sabia, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	KM233455	Mycobacterium phage Farber, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	KX664448	Mycobacterium phage Watson, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	KX507362	Mycobacterium phage Aglet, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH576949	Mycobacterium phage BreSam8, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MN585969	Mycobacterium phage Dieselweasel, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH536813	Mycobacterium phage AugsMagnumOpus, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MF185733	Mycobacterium phage StepMih, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MF185732	Mycobacterium phage Stagni, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MK494096	Mycobacterium phage Mainiac, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	KU984914	Mycobacterium phage Malinsilva, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	JF704101	Mycobacterium virus Microwolf, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	KT359365	Mycobacterium phage DaHudson, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MH651179	Mycobacterium phage MadMarie, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	NC_028798	Mycobacterium phage MarQuardt, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MN586053	Arthrobacter phage BeatusComedenti, complete genome	29810-29836	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	AP013411	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43	29806-29832	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	AP013669	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, * SEQUENCING IN PROGRESS *	3673-3699	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MN693092	Marine virus AFVG_25M37, complete genome	19115-19141	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	NC_031231	Arthrobacter phage KellEzio, complete genome	29812-29838	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MN497953	Mycobacterium phage GtownJaz, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH020238	Mycobacterium phage Lilith, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH077583	Mycobacterium phage PGHhamlin, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH727554	Mycobacterium phage MuchMore, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH338240	Mycobacterium phage Sabia, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	KM233455	Mycobacterium phage Farber, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	KX664448	Mycobacterium phage Watson, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	KX507362	Mycobacterium phage Aglet, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH576949	Mycobacterium phage BreSam8, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MN585969	Mycobacterium phage Dieselweasel, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH536813	Mycobacterium phage AugsMagnumOpus, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MF185733	Mycobacterium phage StepMih, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MF185732	Mycobacterium phage Stagni, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MK494096	Mycobacterium phage Mainiac, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	KU984914	Mycobacterium phage Malinsilva, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	JF704101	Mycobacterium virus Microwolf, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	KT359365	Mycobacterium phage DaHudson, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MH651179	Mycobacterium phage MadMarie, complete genome	2468-2494	5	0.815
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	NC_028798	Mycobacterium phage MarQuardt, complete genome	2467-2493	5	0.815
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	AP013411	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43	29497-29523	6	0.778
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	AP013669	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, * SEQUENCING IN PROGRESS *	3982-4008	6	0.778
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MN693099	Marine virus AFVG_25M184, complete genome	13866-13892	6	0.778
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	AP013411	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43	29497-29523	6	0.778
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	AP013669	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, * SEQUENCING IN PROGRESS *	3982-4008	6	0.778
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MN693099	Marine virus AFVG_25M184, complete genome	13866-13892	6	0.778
NZ_CP034551_2	2.8\|3678083\|27\|NZ_CP034551\|CRT	3678083-3678109	27	MN693189	Marine virus AFVG_25M326, complete genome	18916-18942	7	0.741
NZ_CP034551_2	2.14\|3678317\|27\|NZ_CP034551\|CRT	3678317-3678343	27	MN693189	Marine virus AFVG_25M326, complete genome	18916-18942	7	0.741
NZ_CP034551_3	3.2\|5197370\|34\|NZ_CP034551\|CRISPRCasFinder	5197370-5197403	34	NC_025153	Arcobacter butzleri strain AC1119 plasmid AB-1119-LD, complete sequence	2000-2033	7	0.794
NZ_CP034551_1	1.1\|3308007\|37\|NZ_CP034551\|CRISPRCasFinder	3308007-3308043	37	AP014498	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C73-MedDCM-OCT-S34-C64, * SEQUENCING IN PROGRESS *, 4 ordered pieces	15061-15097	8	0.784
NZ_CP034551_1	1.1\|3308007\|37\|NZ_CP034551\|CRISPRCasFinder	3308007-3308043	37	MK373793	Escherichia phage vB_EcoS_MM01, complete genome	10030-10066	8	0.784
NZ_CP034551_1	1.1\|3308007\|37\|NZ_CP034551\|CRISPRCasFinder	3308007-3308043	37	MN694423	Marine virus AFVG_250M1001, complete genome	26233-26269	8	0.784
NZ_CP034551_1	1.1\|3308007\|37\|NZ_CP034551\|CRISPRCasFinder	3308007-3308043	37	HQ615693	Synechococcus phage S-CRM01, complete genome	25676-25712	8	0.784
NZ_CP034551_2	2.15\|3678362\|36\|NZ_CP034551\|CRT	3678362-3678397	36	MN693092	Marine virus AFVG_25M37, complete genome	19115-19150	8	0.778
NZ_CP034551_3	3.1\|5197316\|31\|NZ_CP034551\|CRISPRCasFinder	5197316-5197346	31	JX238501	Bacillus phage phiAGATE, complete genome	124559-124589	8	0.742
NZ_CP034551_1	1.1\|3308007\|37\|NZ_CP034551\|CRISPRCasFinder	3308007-3308043	37	MH051259	Mycobacterium phage TNguyen7, complete genome	2214-2250	9	0.757
NZ_CP034551_1	1.1\|3308007\|37\|NZ_CP034551\|CRISPRCasFinder	3308007-3308043	37	KY464936	Mycobacterium phage Idleandcovert, complete genome	2216-2252	9	0.757
NZ_CP034551_2	2.16\|3678416\|45\|NZ_CP034551\|CRT	3678416-3678460	45	AP014301	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S28-C84, * SEQUENCING IN PROGRESS *	787-831	11	0.756

1. spacer 2.1|3677803|27|NZ_CP034551|CRT matches to AP014693 (Ralstonia phage RSL2 DNA, complete sequence) position: , mismatch: 4, identity: 0.852

cgaggtaacacgggcgctactggcgct	CRISPR spacer
caaggtaacactggcgcaactggcgca	Protospacer
*.********* ***** ********

2. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacactggtgctactggtcct	Protospacer
**.******** ***********. **

3. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacactggtgctactggtcct	Protospacer
**.******** ***********. **

4. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacactggtgctactggtcct	Protospacer
**.******** ***********. **

5. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacactggtgctactggtcct	Protospacer
**.******** ***********. **

6. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MG676223 (Vibrio phage ValSw3-3, partial genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cttgttaacacggttgctactggcgct	Protospacer
*  * ******** *************

7. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacacaggtgctactggtcct	Protospacer
**.********.***********. **

8. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 4, identity: 0.852

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacacaggtgctactggtcct	Protospacer
**.********.***********. **

9. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MN101228 (Klebsiella phage KPN4, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacactggtgctactggttcc	Protospacer
**.******** ***********. *.

10. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MH171094 (Streptomyces phage Nabi, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
accggcaacacgggtgcgactggcgct	Protospacer
   **.*********** *********

11. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to KX507343 (Streptomyces phage Lorelei, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
accggcaacacgggtgcgactggcgct	Protospacer
   **.*********** *********

12. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MH171093 (Streptomyces phage Rana, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
accggcaacacgggtgcgactggcgct	Protospacer
   **.*********** *********

13. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MN434096 (Klebsiella phage JIPh_Kp127, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacactggtgctactggtcca	Protospacer
**.******** ***********. *

14. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
cagggtaacaccggtgctactggtcca	Protospacer
**.******** ***********. *

15. spacer 2.3|3677884|27|NZ_CP034551|CRT matches to MK613348 (Roseobacter phage CRP-6, complete genome) position: , mismatch: 5, identity: 0.815

caaggtaacacgggtgctactggcgct	CRISPR spacer
acaggggccacgggtgctactggcgct	Protospacer
  *** . *******************

16. spacer 2.6|3678001|28|NZ_CP034551|CRT matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 5, identity: 0.821

gggtgccactggacctcgaa-ggtaacat	CRISPR spacer
tggtgccactggtcctcgaagggcagca-	Protospacer
 *********** ******* **.*.**

17. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MN586053 (Arthrobacter phage BeatusComedenti, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggcgccactggacctcagggtccg	Protospacer
*****.**************.***

18. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgcaactggacctcaaggttct	Protospacer
**.***** ***************  .

19. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgcaactggacctcaaggttct	Protospacer
**.***** ***************  .

20. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MN693092 (Marine virus AFVG_25M37, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggtgct	Protospacer
**.*****.***************. .

21. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to NC_031231 (Arthrobacter phage KellEzio, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggcgccactggacctcagggtccg	Protospacer
*****.**************.***

22. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MN497953 (Mycobacterium phage GtownJaz, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

23. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH020238 (Mycobacterium phage Lilith, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

24. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH077583 (Mycobacterium phage PGHhamlin, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

25. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH727554 (Mycobacterium phage MuchMore, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

26. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH338240 (Mycobacterium phage Sabia, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

27. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to KM233455 (Mycobacterium phage Farber, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

28. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to KX664448 (Mycobacterium phage Watson, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

29. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to KX507362 (Mycobacterium phage Aglet, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

30. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH576949 (Mycobacterium phage BreSam8, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

31. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MN585969 (Mycobacterium phage Dieselweasel, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

32. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH536813 (Mycobacterium phage AugsMagnumOpus, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

33. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MF185733 (Mycobacterium phage StepMih, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

34. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MF185732 (Mycobacterium phage Stagni, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

35. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MK494096 (Mycobacterium phage Mainiac, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

36. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to KU984914 (Mycobacterium phage Malinsilva, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

37. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to JF704101 (Mycobacterium virus Microwolf, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

38. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to KT359365 (Mycobacterium phage DaHudson, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

39. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MH651179 (Mycobacterium phage MadMarie, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

40. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to NC_028798 (Mycobacterium phage MarQuardt, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

41. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MN586053 (Arthrobacter phage BeatusComedenti, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggcgccactggacctcagggtccg	Protospacer
*****.**************.***

42. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgcaactggacctcaaggttct	Protospacer
**.***** ***************  .

43. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgcaactggacctcaaggttct	Protospacer
**.***** ***************  .

44. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MN693092 (Marine virus AFVG_25M37, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggtgct	Protospacer
**.*****.***************. .

45. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to NC_031231 (Arthrobacter phage KellEzio, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggcgccactggacctcagggtccg	Protospacer
*****.**************.***

46. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MN497953 (Mycobacterium phage GtownJaz, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

47. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH020238 (Mycobacterium phage Lilith, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

48. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH077583 (Mycobacterium phage PGHhamlin, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

49. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH727554 (Mycobacterium phage MuchMore, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

50. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH338240 (Mycobacterium phage Sabia, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

51. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to KM233455 (Mycobacterium phage Farber, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

52. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to KX664448 (Mycobacterium phage Watson, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

53. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to KX507362 (Mycobacterium phage Aglet, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

54. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH576949 (Mycobacterium phage BreSam8, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

55. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MN585969 (Mycobacterium phage Dieselweasel, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

56. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH536813 (Mycobacterium phage AugsMagnumOpus, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

57. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MF185733 (Mycobacterium phage StepMih, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

58. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MF185732 (Mycobacterium phage Stagni, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

59. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MK494096 (Mycobacterium phage Mainiac, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

60. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to KU984914 (Mycobacterium phage Malinsilva, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

61. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to JF704101 (Mycobacterium virus Microwolf, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

62. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to KT359365 (Mycobacterium phage DaHudson, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

63. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MH651179 (Mycobacterium phage MadMarie, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

64. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to NC_028798 (Mycobacterium phage MarQuardt, complete genome) position: , mismatch: 5, identity: 0.815

accggtgccactggacctcaaggtaac	CRISPR spacer
accggtgccactggtgctcaaggcccc	Protospacer
**************  *******.  *

65. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 6, identity: 0.778

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggacca	Protospacer
**.*****.**************

66. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.778

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggacca	Protospacer
**.*****.**************

67. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MN693099 (Marine virus AFVG_25M184, complete genome) position: , mismatch: 6, identity: 0.778

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggacct	Protospacer
**.*****.**************   .

68. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 6, identity: 0.778

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggacca	Protospacer
**.*****.**************

69. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.778

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggacca	Protospacer
**.*****.**************

70. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MN693099 (Marine virus AFVG_25M184, complete genome) position: , mismatch: 6, identity: 0.778

accggtgccactggacctcaaggtaac	CRISPR spacer
actggtgctactggacctcaaggacct	Protospacer
**.*****.**************   .

71. spacer 2.8|3678083|27|NZ_CP034551|CRT matches to MN693189 (Marine virus AFVG_25M326, complete genome) position: , mismatch: 7, identity: 0.741

accggtgccactggacctcaaggtaac	CRISPR spacer
caaggtgctactggacctcaaggtcca	Protospacer
   *****.***************

72. spacer 2.14|3678317|27|NZ_CP034551|CRT matches to MN693189 (Marine virus AFVG_25M326, complete genome) position: , mismatch: 7, identity: 0.741

accggtgccactggacctcaaggtaac	CRISPR spacer
caaggtgctactggacctcaaggtcca	Protospacer
   *****.***************

73. spacer 3.2|5197370|34|NZ_CP034551|CRISPRCasFinder matches to NC_025153 (Arcobacter butzleri strain AC1119 plasmid AB-1119-LD, complete sequence) position: , mismatch: 7, identity: 0.794

cttgtcttctgttttactttccggtttcgtgctc	CRISPR spacer
ctcatattctgttttactttccgttttagtgatt	Protospacer
**..* ***************** *** *** *.

74. spacer 1.1|3308007|37|NZ_CP034551|CRISPRCasFinder matches to AP014498 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C73-MedDCM-OCT-S34-C64, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 8, identity: 0.784

accccttgtggaccttggattccttgtggaccttgag	CRISPR spacer
gatgcatctgaaccttggattccttgtgtaccttgag	Protospacer
. . * * **.***************** ********

75. spacer 1.1|3308007|37|NZ_CP034551|CRISPRCasFinder matches to MK373793 (Escherichia phage vB_EcoS_MM01, complete genome) position: , mismatch: 8, identity: 0.784

accccttgtggaccttggattccttgtggaccttgag	CRISPR spacer
aagccagctggaccttgaattccttgcggaccttgaa	Protospacer
*  **   *********.********.*********.

76. spacer 1.1|3308007|37|NZ_CP034551|CRISPRCasFinder matches to MN694423 (Marine virus AFVG_250M1001, complete genome) position: , mismatch: 8, identity: 0.784

accccttgtggaccttggattccttgtggaccttgag	CRISPR spacer
gcgccggttggcccttggattccttgtgggccttgcg	Protospacer
.* **   *** *****************.***** *

77. spacer 1.1|3308007|37|NZ_CP034551|CRISPRCasFinder matches to HQ615693 (Synechococcus phage S-CRM01, complete genome) position: , mismatch: 8, identity: 0.784

--accccttgtggaccttggattccttgtggaccttgag	CRISPR spacer
ttacccccaac--accttgaaatccttgtggaccttgag	Protospacer
  *****. ..  ******.* *****************

78. spacer 2.15|3678362|36|NZ_CP034551|CRT matches to MN693092 (Marine virus AFVG_25M37, complete genome) position: , mismatch: 8, identity: 0.778

accggtgccactggacctcaaggtgct-caaggtaac	CRISPR spacer
actggtgctactggacctcaaggtgctaccggacca-	Protospacer
**.*****.****************** * .*.. *

79. spacer 3.1|5197316|31|NZ_CP034551|CRISPRCasFinder matches to JX238501 (Bacillus phage phiAGATE, complete genome) position: , mismatch: 8, identity: 0.742

ttcttcttttttgtcactagttgaaccgctt	CRISPR spacer
ctaaccttttttgccactagttaaaccgccc	Protospacer
.*  .********.********.******..

80. spacer 1.1|3308007|37|NZ_CP034551|CRISPRCasFinder matches to MH051259 (Mycobacterium phage TNguyen7, complete genome) position: , mismatch: 9, identity: 0.757

accccttgtggaccttggattccttgtggaccttgag	CRISPR spacer
tcaccctcgggaccttggatgccctgtggaccttgtt	Protospacer
 * **.*  *********** **.***********

81. spacer 1.1|3308007|37|NZ_CP034551|CRISPRCasFinder matches to KY464936 (Mycobacterium phage Idleandcovert, complete genome) position: , mismatch: 9, identity: 0.757

accccttgtggaccttggattccttgtggaccttgag	CRISPR spacer
tcaccctcgggaccttggatgccctgtggaccttgtt	Protospacer
 * **.*  *********** **.***********

82. spacer 2.16|3678416|45|NZ_CP034551|CRT matches to AP014301 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S28-C84, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.756

accggcgctactggtgctactggacctcaaggtgttcaaggtaac	CRISPR spacer
accggagctactggtgctactggccctcaaggcccagcaggtgct	Protospacer
***** ***************** ********. .   ****. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

257221 : 265169

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917311.1\|257221_257506_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	1.2e-20	54.8
WP_001029993.1\|257544_259179_+	chaperonin GroEL	A0A219YK78	uncultured_virus	1.5e-157	58.0
WP_162840109.1\|259582_261124_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	8.9e-22	31.7
WP_000833082.1\|261508_262834_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	6.4e-45	30.1
WP_000929879.1\|262978_263680_+	response regulator transcription factor	W8CYM9	Bacillus_phage	9.5e-40	36.9
WP_000719222.1\|263663_265169_+	aminopeptidase AmpS	W8CYF6	Bacillus_phage	1.2e-31	30.3

DBSCAN-SWA_2

300333 : 308709

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625682.1\|300333_301641_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.9e-21	25.3
WP_001170544.1\|301729_302449_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	4.0e-49	44.3
WP_000278823.1\|302441_302696_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666774.1\|302692_303376_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000055555.1\|303359_305579_+	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	8.8e-164	41.2
WP_000879025.1\|305563_306979_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.3e-55	35.4
WP_001262439.1\|307084_308125_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.2e-67	45.9
WP_000088589.1\|308121_308709_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.1e-28	37.4

DBSCAN-SWA_3

1824970 : 1831545

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001233224.1\|1824970_1825225_+	hypothetical protein	I7ILU4	Staphylococcus_phage	1.0e-36	92.9
WP_000658753.1\|1825617_1826019_+	hypothetical protein	NA	NA	NA	NA
WP_000804493.1\|1826185_1826494_+	hypothetical protein	NA	NA	NA	NA
WP_000741276.1\|1826534_1826687_+	hypothetical protein	NA	NA	NA	NA
WP_000364356.1\|1826720_1826966_+	hypothetical protein	NA	NA	NA	NA
WP_001246457.1\|1827011_1827242_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	2.0e-18	66.2
WP_000680282.1\|1827244_1827832_+	HNH endonuclease	A0A1S5SAF6	Streptococcus_phage	8.3e-37	41.8
WP_000053746.1\|1827864_1828290_+	hypothetical protein	S5MUC4	Brevibacillus_phage	1.5e-11	54.7
WP_000101076.1\|1828276_1828921_+	hypothetical protein	NA	NA	NA	NA
WP_001057582.1\|1828935_1829118_+	hypothetical protein	NA	NA	NA	NA
WP_000805619.1\|1829114_1829432_+	transglycosylase	NA	NA	NA	NA
WP_000026878.1\|1829448_1830390_+	hypothetical protein	NA	NA	NA	NA
WP_000790090.1\|1830392_1830539_+	BC1881 family protein	NA	NA	NA	NA
WP_001202994.1\|1830664_1830862_+	hypothetical protein	NA	NA	NA	NA
WP_000659529.1\|1830886_1831267_+	hypothetical protein	A0A088F787	Idiomarinaceae_phage	1.6e-25	60.2
WP_000843022.1\|1831263_1831545_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	3.6e-14	60.7

DBSCAN-SWA_4

1843305 : 1865999

Bacillus_phage(88.89%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000443958.1\|1843305_1843665_+	hypothetical protein	A0A0A7AQ61	Bacillus_phage	4.1e-39	82.9
WP_000762691.1\|1843651_1843867_+	hypothetical protein	H0USV9	Bacillus_phage	2.3e-29	97.1
WP_000818630.1\|1843934_1844312_+	hypothetical protein	NA	NA	NA	NA
WP_000931845.1\|1844401_1844656_+	hypothetical protein	NA	NA	NA	NA
WP_002195379.1\|1844692_1848589_+\|tail	phage tail tape measure protein	A6M961	Geobacillus_virus	5.5e-12	48.8
WP_000959921.1\|1848603_1850100_+\|tail	phage tail family protein	A0A0A7AQV1	Bacillus_phage	7.6e-220	80.2
WP_001260204.1\|1850096_1855073_+	hypothetical protein	I7ILV8	Bacillus_phage	0.0e+00	62.3
WP_000398730.1\|1855164_1855401_+	hypothetical protein	A0A0A7AQY5	Bacillus_phage	2.5e-08	97.4
WP_000462608.1\|1855400_1855640_+	hypothetical protein	A0A0A7AR38	Bacillus_phage	2.6e-34	97.5
WP_000753412.1\|1855636_1856701_+	N-acetylmuramoyl-L-alanine amidase	A0A0A7AQV3	Bacillus_phage	9.9e-198	94.9
WP_000607109.1\|1857236_1858898_-	hypothetical protein	A0A1S5SA14	Streptococcus_phage	1.0e-31	30.3
WP_000448740.1\|1858970_1859297_-	hypothetical protein	A0A0S2GLG3	Bacillus_phage	6.2e-18	45.4
WP_001999824.1\|1859373_1859640_-	helix-turn-helix transcriptional regulator	A0A288WFZ7	Bacillus_phage	4.1e-20	61.8
WP_001169624.1\|1859793_1859916_+	DUF3961 domain-containing protein	Q3HKZ4	Bacillus_phage	9.7e-09	62.2
WP_000669088.1\|1860553_1860754_-	helix-turn-helix transcriptional regulator	Q2I8E4	Bacillus_phage	1.4e-12	54.5
WP_001247348.1\|1860939_1861209_+	hypothetical protein	NA	NA	NA	NA
WP_001267619.1\|1861205_1861508_+	hypothetical protein	A0A288WG08	Bacillus_phage	3.0e-27	58.2
WP_000170794.1\|1861504_1861687_+	hypothetical protein	Q2I8E2	Bacillus_phage	6.3e-20	83.3
WP_000891520.1\|1861802_1862987_+	cell division protein FtsK	A0A288WFS1	Bacillus_phage	6.6e-142	63.7
WP_011110021.1\|1862928_1863552_+	hypothetical protein	H0USY2	Bacillus_phage	1.1e-95	80.6
WP_001261512.1\|1863551_1863785_+	hypothetical protein	NA	NA	NA	NA
WP_000765496.1\|1863792_1863981_+	hypothetical protein	NA	NA	NA	NA
WP_000200736.1\|1864000_1864216_+	hypothetical protein	NA	NA	NA	NA
WP_000273126.1\|1864526_1865999_+	recombinase family protein	Q3HKZ2	Bacillus_phage	5.9e-140	52.2

DBSCAN-SWA_5

1899923 : 1908086

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000755498.1\|1899923_1901216_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	3.5e-11	31.5
WP_001194309.1\|1901315_1902080_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000453882.1\|1902320_1904081_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.8e-273	98.2
WP_000612413.1\|1904166_1904844_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.5e-122	98.7
WP_001231630.1\|1904840_1905914_+	HAMP domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	1.5e-185	97.2
WP_000818985.1\|1906203_1906923_+	3-ketoacyl-ACP reductase	W8CYX9	Bacillus_phage	5.9e-61	100.0
WP_001258500.1\|1907213_1908086_+	aminoglycoside 6-adenylyltransferase	A0A1X9I6F2	Streptococcus_phage	7.4e-66	45.1

DBSCAN-SWA_6

2508186 : 2625353

106

Bacillus_phage(78.57%)

tail,terminase,portal,head,integrase,bacteriocin,transposase,protease,holin,capsid,tRNA

attL 2541538:2541556|attR 2621701:2621719

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000558598.1\|2508186_2509740_+\|tRNA	lysine--tRNA ligase	NA	NA	NA	NA
WP_001128402.1\|2509799_2510228_-	cell wall hydrolase	NA	NA	NA	NA
WP_000285667.1\|2510378_2511293_+	acetamidase/formamidase family protein	NA	NA	NA	NA
WP_000238994.1\|2511420_2512128_+	response regulator transcription factor	NA	NA	NA	NA
WP_002183605.1\|2512124_2513108_+	sensor histidine kinase	NA	NA	NA	NA
WP_000376264.1\|2513344_2513971_-	hypothetical protein	NA	NA	NA	NA
WP_000661373.1\|2514528_2516157_+	ABC-F type ribosomal protection protein	A0A1B0RXA0	Streptococcus_phage	7.8e-53	34.3
WP_000343078.1\|2516177_2516762_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000404266.1\|2517020_2517791_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-32	39.9
WP_000144161.1\|2517765_2519700_+	ABC transporter permease	NA	NA	NA	NA
WP_000744466.1\|2519769_2520441_+	hypothetical protein	NA	NA	NA	NA
WP_001165491.1\|2520506_2520848_-	DUF3914 domain-containing protein	NA	NA	NA	NA
WP_000517073.1\|2521127_2522369_+	lipase	NA	NA	NA	NA
WP_000701770.1\|2522456_2523482_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_000471646.1\|2523571_2525020_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_000690435.1\|2525024_2525939_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_000144509.1\|2526245_2526935_+	thiaminase II	NA	NA	NA	NA
WP_002082716.1\|2527332_2527596_+	DUF3937 domain-containing protein	NA	NA	NA	NA
WP_001071366.1\|2527957_2528278_+\|bacteriocin	heterocycloanthracin/sonorensin family bacteriocin	NA	NA	NA	NA
WP_002041181.1\|2528771_2529257_+	hypothetical protein	NA	NA	NA	NA
WP_000736202.1\|2529568_2530270_+	DUF3962 domain-containing protein	NA	NA	NA	NA
WP_000675870.1\|2530308_2531418_-\|integrase	site-specific integrase	A0A0U3U8Y8	Bacillus_phage	2.9e-147	79.1
WP_001197707.1\|2532065_2533274_+	hypothetical protein	D2XQ10	Bacillus_virus	1.3e-81	45.4
WP_000791664.1\|2533300_2533456_+	hypothetical protein	NA	NA	NA	NA
WP_000425256.1\|2533716_2534067_-	helix-turn-helix transcriptional regulator	A0A288WFW4	Bacillus_phage	7.4e-17	39.7
WP_001180928.1\|2534250_2534547_+	helix-turn-helix transcriptional regulator	A0A288WG89	Bacillus_phage	1.1e-08	46.5
WP_000522024.1\|2534762_2535029_+	helix-turn-helix domain-containing protein	A0A0U3ULL9	Bacillus_phage	1.6e-35	90.6
WP_000390298.1\|2535028_2535193_+	hypothetical protein	A0A0U3B230	Bacillus_phage	1.5e-20	90.7
WP_001241130.1\|2535222_2535399_+	hypothetical protein	A0A0U3SQC4	Bacillus_phage	1.8e-24	91.4
WP_000190248.1\|2535403_2536150_+	DnaD domain protein	A0A1B0T6C0	Bacillus_phage	4.2e-78	79.9
WP_011110116.1\|2536088_2536964_+	ATP-binding protein	Q2I8C8	Bacillus_phage	8.5e-62	45.2
WP_000332463.1\|2536979_2537174_+	hypothetical protein	A0A1B1P7U7	Bacillus_phage	9.0e-25	87.5
WP_000805171.1\|2537199_2537373_+	DUF3954 domain-containing protein	A0A1B1P7U5	Bacillus_phage	1.8e-24	98.2
WP_000811858.1\|2537387_2537642_+	hypothetical protein	A0A0U3SU43	Bacillus_phage	8.8e-36	85.7
WP_000755581.1\|2537656_2537869_+	hypothetical protein	A0A1B0T6B5	Bacillus_phage	4.3e-20	79.0
WP_138920155.1\|2538050_2539589_-	collagen-like protein	NA	NA	NA	NA
WP_002196025.1\|2540321_2541026_-	collagen-like protein	NA	NA	NA	NA
2541538:2541556	attL	NA	NA	NA	NA
WP_001113469.1\|2542224_2542389_-	hypothetical protein	A0A288WGN0	Bacillus_phage	8.2e-19	96.3
WP_000183173.1\|2542516_2542639_+	DUF3983 domain-containing protein	NA	NA	NA	NA
WP_001013362.1\|2542659_2542848_+	hypothetical protein	NA	NA	NA	NA
WP_000677453.1\|2542946_2543117_+	hypothetical protein	A0A1B0T6D0	Bacillus_phage	1.0e-11	82.1
WP_000166181.1\|2543144_2543627_+	ArpU family transcriptional regulator	H0USV3	Bacillus_phage	1.1e-71	83.1
WP_001012145.1\|2543626_2544169_+\|integrase	site-specific integrase	W8CYP1	Bacillus_phage	5.0e-89	91.1
WP_000394432.1\|2544466_2544811_+	hypothetical protein	NA	NA	NA	NA
WP_000930971.1\|2545113_2545332_+	hypothetical protein	H0USV5	Bacillus_phage	3.1e-21	66.2
WP_011110117.1\|2545782_2546178_+	DUF3942 family protein	NA	NA	NA	NA
WP_001008298.1\|2546304_2546943_+	hypothetical protein	NA	NA	NA	NA
WP_000627242.1\|2547025_2547313_+	hypothetical protein	A0A1C8EAA0	Bacillus_phage	1.7e-43	90.5
WP_000872553.1\|2547309_2547702_+	HNH endonuclease	A0A1B1P7N1	Bacillus_phage	1.1e-72	96.2
WP_000113451.1\|2547786_2548212_+\|terminase	P27 family phage terminase small subunit	A0A1C8E969	Bacillus_phage	2.0e-69	95.0
WP_000587519.1\|2548208_2549933_+\|terminase	terminase large subunit	A0A1C8E985	Bacillus_phage	0.0e+00	93.4
WP_000573605.1\|2549999_2550506_+	hypothetical protein	NA	NA	NA	NA
WP_000524247.1\|2550522_2551707_+\|portal	phage portal protein	A0A1B1P7N5	Bacillus_phage	3.3e-218	97.2
WP_000687908.1\|2551696_2552278_+\|head,protease	HK97 family phage prohead protease	A0A1C8EA63	Bacillus_phage	2.7e-96	95.9
WP_001049345.1\|2552279_2553584_+\|capsid	phage major capsid protein	A0A1C8E976	Bacillus_phage	1.1e-193	93.0
WP_000369282.1\|2553585_2553846_+	hypothetical protein	A0A1B2APX3	Phage_Wrath	9.3e-41	95.3
WP_001126093.1\|2553823_2554156_+	hypothetical protein	A0A1B2APX8	Phage_Wrath	1.3e-52	95.5
WP_001166632.1\|2554145_2554475_+	hypothetical protein	A0A1B0T6B7	Bacillus_phage	6.4e-55	95.4
WP_000157919.1\|2554474_2554852_+	HK97 gp10 family phage protein	A0A1C8E995	Bacillus_phage	1.8e-61	95.2
WP_000151368.1\|2554863_2555499_+	hypothetical protein	A0A1B1P7Q4	Bacillus_phage	1.9e-116	99.1
WP_000113343.1\|2555510_2555897_+	hypothetical protein	A0A1C8E984	Bacillus_phage	1.0e-64	97.7
WP_001119328.1\|2556140_2559665_+\|tail	phage tail tape measure protein	A0A1B1P7P9	Bacillus_phage	0.0e+00	98.0
WP_000884118.1\|2559665_2560349_+	hypothetical protein	A0A1B0T6A0	Bacillus_phage	8.8e-123	94.2
WP_000631941.1\|2560345_2562697_+	hypothetical protein	A0A1B0T695	Bacillus_phage	0.0e+00	93.7
WP_000439566.1\|2564037_2564463_+\|holin	phage holin family protein	A0A1B1P787	Bacillus_phage	1.0e-68	95.7
WP_000540622.1\|2564462_2565281_+	N-acetylmuramoyl-L-alanine amidase	D2XR33	Bacillus_phage	3.0e-146	87.9
WP_000644810.1\|2565419_2566172_-	hypothetical protein	NA	NA	NA	NA
WP_000626130.1\|2566683_2568366_+	RNAseH domain-containing protein	NA	NA	NA	NA
WP_000732187.1\|2568572_2569337_+	DUF3959 family protein	NA	NA	NA	NA
WP_000905581.1\|2569479_2569896_+	DUF3995 domain-containing protein	NA	NA	NA	NA
WP_000878369.1\|2570016_2570220_+	hypothetical protein	NA	NA	NA	NA
WP_000362067.1\|2570548_2570761_-	hypothetical protein	NA	NA	NA	NA
WP_000565687.1\|2570970_2571975_+	DUF1835 domain-containing protein	NA	NA	NA	NA
WP_000282687.1\|2572120_2572525_+	hypothetical protein	NA	NA	NA	NA
WP_000062123.1\|2572684_2573920_+	cytochrome P450	NA	NA	NA	NA
WP_000106396.1\|2574187_2575471_+	MFS transporter	NA	NA	NA	NA
WP_001069204.1\|2575460_2576093_+	Vat family streptogramin A O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	1.6e-25	43.1
WP_000046095.1\|2576163_2576319_+	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_000204967.1\|2576487_2576757_+	cytochrome P450	NA	NA	NA	NA
WP_000606465.1\|2576874_2577276_+\|transposase	IS200/IS605 family transposase	Q332K6	Clostridium_botulinum_C_phage	1.8e-51	72.0
WP_000084148.1\|2577281_2578361_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1C9EG99	Acidianus_two-tailed_virus	5.1e-16	27.2
WP_000742122.1\|2578544_2578847_+	cytochrome P450	NA	NA	NA	NA
WP_000954442.1\|2578956_2579535_+	cysteine dioxygenase	NA	NA	NA	NA
WP_000766394.1\|2579710_2580562_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_001088551.1\|2581013_2582801_+	PAS domain-containing protein	NA	NA	NA	NA
WP_000743777.1\|2583035_2585162_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_000765190.1\|2585238_2585769_+	signal peptidase I	NA	NA	NA	NA
WP_000932158.1\|2586027_2587215_+	UDP-glucosyltransferase	A0A2H4ZK81	Cryptophlebia_leucotreta_granulosis_virus	8.9e-06	23.8
WP_000864400.1\|2587305_2587986_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_001038198.1\|2588395_2588659_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_002026798.1\|2588746_2590144_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_000205476.1\|2590140_2592510_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_002026795.1\|2592580_2594359_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000439131.1\|2594337_2594904_+	hypothetical protein	NA	NA	NA	NA
WP_000615896.1\|2594950_2595901_-\|tRNA	methionyl-tRNA formyltransferase	NA	NA	NA	NA
WP_000917709.1\|2595897_2596794_-	molybdopterin biosynthesis protein MoeB	NA	NA	NA	NA
WP_000383874.1\|2598358_2599204_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000410780.1\|2599804_2599999_+	hypothetical protein	NA	NA	NA	NA
WP_000943882.1\|2600135_2600333_+	hypothetical protein	NA	NA	NA	NA
WP_000459802.1\|2601704_2602592_-	collagen-like protein	NA	NA	NA	NA
WP_000649886.1\|2603802_2604963_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_113732224.1\|2605291_2620324_-	DUF11 domain-containing protein	NA	NA	NA	NA
WP_000589749.1\|2620799_2621267_-	isochorismatase family protein	NA	NA	NA	NA
WP_000997500.1\|2623388_2623661_+	hypothetical protein	NA	NA	NA	NA
2621701:2621719	attR	NA	NA	NA	NA
WP_000877140.1\|2623665_2623839_+	hypothetical protein	NA	NA	NA	NA
WP_000395870.1\|2623919_2625353_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

3657555 : 3669327

Bacillus_phage(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413738.1\|3657555_3658176_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	8.2e-19	62.2
WP_000976237.1\|3658266_3659070_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_000031387.1\|3659070_3659613_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_001102628.1\|3659605_3659929_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000725955.1\|3660967_3662023_-	SH3 domain-containing protein	A0A1B0T6C8	Bacillus_phage	2.4e-143	69.2
WP_000570187.1\|3662019_3662259_-\|holin	holin	A0A0A7AR38	Bacillus_phage	1.3e-25	78.7
WP_000348875.1\|3662258_3662495_-	hypothetical protein	A0A2H4J382	uncultured_Caudovirales_phage	1.8e-14	87.2
WP_002026207.1\|3662572_3662779_-	hypothetical protein	NA	NA	NA	NA
WP_001051360.1\|3663127_3663949_-	M23 family metallopeptidase	A0A218KCJ1	Bacillus_phage	1.2e-20	38.6
WP_025921790.1\|3664298_3665276_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.1e-33	43.9
WP_000464425.1\|3665514_3665901_-	DUF1492 domain-containing protein	A0A288WG73	Bacillus_phage	2.6e-47	71.4
WP_000511414.1\|3666019_3666892_-	DnaD domain protein	A0A2H4J394	uncultured_Caudovirales_phage	2.0e-95	65.0
WP_001189065.1\|3667044_3667239_-	hypothetical protein	A0A1C8E9A1	Bacillus_phage	1.7e-15	71.0
WP_000531223.1\|3667250_3668009_-	phage regulatory protein	A0A2H4JBC7	uncultured_Caudovirales_phage	7.0e-97	69.4
WP_000283431.1\|3668211_3668424_-	hypothetical protein	A6M975	Geobacillus_virus	1.6e-11	63.0
WP_011110319.1\|3668667_3669327_+	helix-turn-helix domain-containing protein	A0A2H4J441	uncultured_Caudovirales_phage	4.3e-34	41.0

DBSCAN-SWA_8

5095009 : 5105444

Streptococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001990088.1\|5095009_5095207_-	cold shock protein CspC	Q9AZD3	Lactococcus_phage	9.8e-19	67.7
WP_011110483.1\|5095333_5096038_-	ComF family protein	NA	NA	NA	NA
WP_000225360.1\|5096037_5097387_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	8.5e-61	35.1
WP_000084148.1\|5097625_5098705_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1C9EG99	Acidianus_two-tailed_virus	5.1e-16	27.2
WP_000606465.1\|5098710_5099112_-\|transposase	IS200/IS605 family transposase	Q332K6	Clostridium_botulinum_C_phage	1.8e-51	72.0
WP_000499481.1\|5099319_5100732_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	1.3e-11	39.8
WP_000400857.1\|5100880_5101195_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000684725.1\|5101367_5102210_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	3.6e-17	40.3
WP_000926669.1\|5102446_5103082_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	8.1e-38	40.6
WP_000392794.1\|5103164_5104289_+	LCP family protein	NA	NA	NA	NA
WP_000140145.1\|5104328_5105444_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.0e-19	30.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP034552

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP034551

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection