CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP027942	Agrococcus sp. SGAir0287 chromosome, complete genome	8 crisprs	csa3,WYL,cas3,DEDDh	3	4	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP027942_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_1

162266-162512

Orphan

Consensus_repeat	Method
CCGATCGGCCGATCCACATGACCGCTCCTTGAGGTGCGCCCTTCGAGACGCTCGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP027942_1

>merge|NZ_CP027942|1|162266-162512|PILER-CR
CATGACCGCTCCTTGAGGTGCGAGCGCAGCGAGCCTCGAAAGGAGCCCCGACCAGAGGTCGGAGGGACCGCCGATCGGCCGATCCACATGACCGCTCCTTGAGGTGCGCCCTTCGAGACGCTCGCTGCGCTCGCTCCTCAGGACCCGCGCAGCGAGCCTCGAAAGGAGCCCGACCAGAGGTTGGTGAGATCGCCGATCGGCCGATCCACATGACCGCTCCTTGAGGTGCGCCCTTCGAGACGCTCGC

>NZ_CP027942|1|1|162266-162512|PILER-CR
CATGACCGCTCCTTGAGGTGCGAGCGCAGCGAGCCTCGAAAGGAGCCCCGACCAG	AGGTCGGAGGGACCGCCGATCGGCCGATCCACATGACCGCTCCTTGAG
GTGCGCCCTTCGAGACGCTCGCTGCGCTCGCTCCTCAGGACCCGCGCAGCGAGCC	TCGAAAGGAGCCCGACCAGAGGTTGGTGAGATCGCCGATCGGCCGATCCACATGACCGCTCCTTGAG
GTGCGCCCTTCGAGACGCTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137754659.1\|154842_155154_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137754655.1\|149149_149866_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP027942.1\|WP_137754670.1\|171109_171874_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP027942.1\|WP_137754663.1\|159053_160085_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP027942.1\|WP_137754661.1\|156652_157819_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP027942.1\|WP_137754667.1\|167286_168213_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP027942.1\|WP_137754660.1\|155822_156656_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP027942.1\|WP_137754668.1\|168328_169627_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223239
NZ_CP027942.1\|WP_137754657.1\|151311_152565_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|377746
NZ_CP027942.1\|WP_137754662.1\|157821_159057_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP027942.1\|WP_137754664.1\|162606_163962_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|367155
NZ_CP027942.1\|WP_137754666.1\|165684_167178_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|273797
NZ_CP027942.1\|WP_137754669.1\|169623_171108_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP027942.1\|WP_137754658.1\|152778_154731_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP027942.1\|WP_137754671.1\|171908_172961_+\|tartrate-dehydrogenase	unknown	unknown	gnl\|CDD\|181281
NZ_CP027942.1\|WP_137757126.1\|160226_162080_+\|amylo-alpha-1,6-glucosidase	unknown	unknown	gnl\|CDD\|225942
NZ_CP027942.1\|WP_137754656.1\|149862_151293_+\|FGGY-family-carbohydrate-kinase	unknown	unknown	gnl\|CDD\|223996
NZ_CP027942.1\|WP_137754673.1\|174213_175884_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP027942.1\|WP_137754665.1\|164409_165618_+\|cysteine-desulfurase-like-protein	unknown	unknown	gnl\|CDD\|273906
NZ_CP027942.1\|WP_137754672.1\|173040_174066_+\|cation-transporter	unknown	unknown	gnl\|CDD\|224151

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137754663.1\|159053_160085_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.67001e-68
NZ_CP027942.1\|WP_137754655.1\|149149_149866_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.03939e-68
NZ_CP027942.1\|WP_137754670.1\|171109_171874_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.77552e-65
NZ_CP027942.1\|WP_137754661.1\|156652_157819_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.54362e-69
NZ_CP027942.1\|WP_137754667.1\|167286_168213_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.51165e-32
NZ_CP027942.1\|WP_137754660.1\|155822_156656_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.92657e-76
NZ_CP027942.1\|WP_137754668.1\|168328_169627_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|223239	COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism].	7.94548e-140
NZ_CP027942.1\|WP_137754657.1\|151311_152565_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	6.07973e-144
NZ_CP027942.1\|WP_137754662.1\|157821_159057_-\|extracellular-solute-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.45093e-59
NZ_CP027942.1\|WP_137754664.1\|162606_163962_-\|HNH-endonuclease	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	4.18436e-23
NZ_CP027942.1\|WP_137754666.1\|165684_167178_-\|amino-acid-permease	gnl\|CDD\|273797	TIGR01773, GABA_permease, gamma-aminobutyrate permease. GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines].	1.19696e-141
NZ_CP027942.1\|WP_137754669.1\|169623_171108_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP027942.1\|WP_137754658.1\|152778_154731_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NZ_CP027942.1\|WP_137754671.1\|171908_172961_+\|tartrate-dehydrogenase	gnl\|CDD\|181281	PRK08194, PRK08194, tartrate dehydrogenase; Provisional.	2.06639e-157
NZ_CP027942.1\|WP_137757126.1\|160226_162080_+\|amylo-alpha-1,6-glucosidase	gnl\|CDD\|225942	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism].	1.49e-76
NZ_CP027942.1\|WP_137754656.1\|149862_151293_+\|FGGY-family-carbohydrate-kinase	gnl\|CDD\|223996	COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism].	1.57293e-54
NZ_CP027942.1\|WP_137754673.1\|174213_175884_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	4.48112e-165
NZ_CP027942.1\|WP_137754665.1\|164409_165618_+\|cysteine-desulfurase-like-protein	gnl\|CDD\|273906	TIGR01976, am_tr_V_VC1184, cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase. [Unknown function, Enzymes of unknown specificity].	3.23951e-125
NZ_CP027942.1\|WP_137754672.1\|173040_174066_+\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	3.44052e-85

>NZ_CP027942.1|WP_137757126.1|160226_162080_+|amylo-alpha-1,6-glucosidase
MLHEELVVLRAPTQVWSSPTGDLGAMPIHGVFHADARVVDELRIEVGGEVPEPIGATATASEALFTSVARGIDDGPTPDPRVRIDRRRVVGAGALDEHVAIANALDAALDTTVTFVVRVDAQDLQAVKSGVLGSEAPAIEERAGLVVATHEGRRLELDASGADVAVLGRTVSLTWPVHVPAGGSAEVALRLRVSDEGQVVAPYAGAAVLERVPTTGDARLDRWAAHALADLDALAMTRPGLGDEPFLAAGAPWFLTLFGRDTLIAARLLLPVDRGLALGTLRALARLQGARDDAASAEQPGKILHEIRDGVFTMPGEGIVLPPVYYGTVDATPLWVVLLGRALEAGAVSLDDVRTLRAELEAALTWMRDHGDPAGTGFLHYRDELGTGLANQGWKDSGDSIRFHDGSIADGPIALAEVQAQAYEAAVLGADLLDALDGTGAGDAWRVWAADLAVRFRDRFWVERDGTRFLAIALDGEGRPVDARTSNMGQCIGTGILTREEEALLAAQLVAPEMASRWGLRTMATDEGGYWPLSYHCGSVWPHDTGVVVEGMLRAGLRSEAAALATRLLDAAEAFAWRMPELFSGDDLAAPIAYPASCRPQAWSAAAVVPVARALAG
>NZ_CP027942.1|WP_137754663.1|159053_160085_-|LacI-family-transcriptional-regulator
MHEEVREVRATLSDVAAKAGVSRQTVSNALNTPRIVHPATLERVMEAVAELGYSPNLHARRLRTSSARTIGVRLEPVHDGIHGVLLDRFLHAVTEQAADLDRHVLVFTADGPDDEVARIRSLSQRSLADAFILTSTDHRDARVAALVEAGIPFVAFGRSWDADGPDHAWVDVDGRAGTREATEACLAVGERVAFLGWPTGSGAGDERRAGWREAMDVAGLATDLDRAVTDDPGEAQEAASELLAAGATAIVCASDTLALGAIGALARADASVPVVGFDDTGVAAGLGFSSVDQSLGDVAAAVLSLLHGDADHRLVTPRLHRRAHPRWGLPAQRTASADGKEAS
>NZ_CP027942.1|WP_137754662.1|157821_159057_-|extracellular-solute-binding-protein
MTDRRRQRRALQVAGVAGVAALALAGCSGGGGGGGDDAGTLQVLIGSSGDAETNAVQAAVDAWSEESGVDVEVVAASDLGQELAQGFAGDIPPDLFYMSWDQFQTYAADEYLEPYASNLDNAGDFYPALVDTFTYDGDFICDPKDFSTLGLVINTDLWAAAGLTDADIPTDWDQLASVAQRLTTGGTVGLSMGAEYARVGVFMEQAGGGLVTDDEVTADSPENVEALTYLQGLLTSGSLAWPADLGAGWGGEAFGNGQAAMVIEGPWIAGALENDFPDVSYQVAELPSGPGGQGTFTFSNCWGIPEGSDTADDATSLVEFLTSDEQQLAFSDAFGVIPSTESAAATYAETYPENAAFVAGAEYAVSPIAFPGASEVVGEFNTVVPTLATADPQAILTQLQGQLEDAYAEAQ
>NZ_CP027942.1|WP_137754661.1|156652_157819_-|sugar-ABC-transporter-permease
MAERAPATTRVRRRGSTRGGETRAGWLFVSPAIVVVGVFLVAPILLALWVSFTDWNGRNSPLFNDRVDVVGLDNYAAITTDDRLTRDLFGRALRNNLFYVLLVVPLQTALALFLAVQVNRRLLKAKGFFRTAFYFPSVTSSIAITGVFLFLFQASGAVNAVLAWLQIDGPNWMADPNGVVHLALGAVGIGQPAGWGDPGFLGVSAWEWIAGPSVAQCVLIALAVFTTSGTFMLLFLAGLQSISGEVGEAAIMDGANARQSFFQVTLPMLRPVLFTVLTLGLIGTWQVFDQVYLTRGTPAAATLTSPAYMAYDQAFSENEPGIAAAIAFVLFLIIIVFSLLQRLVLSERDEPWRPLRRRGRRTITDADGGVAQGTARLQAGSTQKGTGA
>NZ_CP027942.1|WP_137754660.1|155822_156656_-|carbohydrate-ABC-transporter-permease
MRQRFTAGLVAGYVVLILLAVAYLYPFLISVASSFKTDQEAVAEPLSLIPQTPTFTAYERLFTGTDIGLWGVNSVIVTLCVTLGRVFFCSLAGYALSRLRFRGRSVVFAGFIAVMAVPSVVLMVPRFLVLKELGLYDTYGGMIIPLIVDAAGIFIMKQFFDSIPASIEEAARIDGAGVFRTFWSVTLPMAAPALITLTILSFQGSWNEFAHFVISRQSPELNTLTTGVASLVSGQLGSGSQFPLKLAAAVLMTIPVAIVFFIFQRRIMSTTEGAEKG
>NZ_CP027942.1|WP_137754659.1|154842_155154_+|hypothetical-protein
MPQDGIHEQASSTEQASSTERDDFEAEVPSEPPSPHSDDDWPEGDLDDDGRGDDAPVTTDDPVHPAMGERFADAHADRPWLLPSIAAAAALAIVAFVVLTRRA
>NZ_CP027942.1|WP_137754658.1|152778_154731_+|BCCT-family-transporter
MAEHQVSQLARDWSPKEVWAQLKKPVFIPAVILIAGLTIFAIVYAGTGGDAFTVLNTAITNGVGWWYILAATGFVLFALYVGLSRIGSIRLGRDDEEPEFSTVSWFTMLFSAGMGIGLVFYSVAEPLSHMTTPPENAGVEPGTDAAGRLAMDLTLYHWGLHAWAIYVVVGLGLAYMTFRRGRPLSIRWLLEPMLGRQRVEGWMGHTIDVVAIVGTMFGVATSLGLGVQQIMAGFEFLGWFQANAQLSIALIAGVSALAAFSVVSGLDRGLKWLSNINMSLAALLAVFVLLLGPTLVILQSMVANTGSYIAALPSLSLETWPLANDGWAGGWTIFYWGWWMSWAPFVGMFIARISRGRTIRQFVFGVLLAPTIIGILWFSIFGDSAILRQLEVGDLLVDGAVDTNTSLFHLLATLPFAEATSVLAILIIVFFFVTSADSGALVVDILATGGATTTPRLTRLLWVAIMATTAGVLLVVGGSEALTALQTASIATAVPFSIIMVLACVALLKAFHFEVAATPRYVRARVASASELSPEALAEAAAAAGTERRGLFRRRREVSSTFAGLTAPSAPIAGAGDGEGVLVALHPVPSAAVDVDADGVAQLVEERLAQDPIADEVFDTPEFQASQAAVDHEASEAASDDGSSATRPGA
>NZ_CP027942.1|WP_137754657.1|151311_152565_-|Na+/H+-antiporter-NhaA
MRTRLHAVTSSLRQETTSGILLLIAAAAALVWANSPWRDGYQGLSETVAGPTALHLDLSLSTWAADGLLAIFFFVVGVELKHEIVAGSLRRLREAAVPVLAAIGGMAVPAVIFTVVVLVAGDEAALPGWAIPTATDIAFALAILAVFGRGLPVPLRTFLLTLAVVDDLLAITVIAVFYTAAIDVVTLVLALLAVAAFGVLVRMAWAHWWLLLPVAAVAWWLTHESGVHATVAGVALGAMVPASRIHGEREPRTLRYEHLVRPVSTAIALPIFAFFAAGVSIEGDVFAVLGQPVAVAIVAGLILGKLVGVLGVTTIVTTVTPLRLPDGIGIRDLRPIALLTAIGFTVSLLISELSFADDGRTDAAKLAILVASGVSAVLAAAELRWDAAKARKRDMNEDGVPDRPWPLIGSKEAGDAH
>NZ_CP027942.1|WP_137754656.1|149862_151293_+|FGGY-family-carbohydrate-kinase
MSGLDRAVVAVDVGTSAVRAALVSSGEGVLRSVRVARADDVGGATYDPDALQSDVERAIAALEVDARPAALAIAAHIGAVAVDEALRPVVPAGSWSDARGVEALLRLDDVARGELLSRAGRPTVVGGGLALAASLVDDGCDGAVATVLGPKDLLVARLSGHVGMDLVDAAYTLALDVAHRAWSPASLEAARVPRAWMPALAPPHAVVASLSAHAAVRCRLAEGTPIVSGSPDGSAGIGILLGARSDAIVDVAGTTDVLGRVIGAIPEAPPGAVLNPALVADRWVAGGATGMTGGAVARWRALVGAVDEAALRAVPPGAGGLHVVPGMSGTRFPRWRSDDAGAVVGQRPEHGAAEVLRAAQEGAAHVVREGVDLLDPQRSLPVILAGGSTRSEHVVRMRAALLGRRVLVAADPDVTLAGAAGLALVGAGLVADLDEARERLGIALRVVEPDSGEVDAYDRIHRSWIDVRDAIAQAAR
>NZ_CP027942.1|WP_137754655.1|149149_149866_+|GntR-family-transcriptional-regulator
MHRAPRYSVIHADIVEQISSGALGPGTRLPSEQDLAKRYGVSRMTVRQALDLLASEEVIVRKHGSGTFVREHSRQGRHLDRLRSFAAELADADVVVDAEIVRFELVEAPDDVAEALALEPGDPVHRLTRVRRVDGIPAALQDAWVPSYVAPSLSREPLVDGSLYRTLAERHGVRLRWADQSMTAELLGEAEAALLRVEPGGAVLRGMRTTYSDADEPVEFTHGWTLPSFPLLLRIDAE
>NZ_CP027942.1|WP_137754664.1|162606_163962_-|HNH-endonuclease
MEQAMEREPQGVDPSALDAIQANALSQLAAVDAGVQALEAHRMRLLAALGHLAIERAGGRSERTAMEVRAVAAEIGALSRVSDGTVERQIADAMALVDGWPLVLDAFATGRIGRGHVRAIVEAGGVLASSDVPAEARTDYETQMVALAETTTPTRLAKAARVAADAHVPQPLVERHARARDDRHVRVTPADDGMAHLYAYLPAVLAQGIDHRLRHGSRAKPKDDPRTVDQWRADALCELLLTGHGAERAADGADLDATAGLLAGIRPVVQVTVPVTTITGAADAPGVLDGAQPVDPETARLLAGVAATWERLLTDPVGGTVVEVDTYAPTAAQRRLLRARDGRCRFPGCGAAARDDDVDHTIAWEEGGTTSLGNLAHLCRRHHTLKHATAWTVRQPAAGELRWRSPLGHVYVDRPPPAGASFAELRRTLRDEALARDPWGEETAPQDGMPF
>NZ_CP027942.1|WP_137754665.1|164409_165618_+|cysteine-desulfurase-like-protein
MDFDVAAFRERFPSLASGIAHFDGPGGTQTPREVGAAIADTLTGPLSNRGRQVASARAADDAVTAFRQAYADLLGVPPTGIVHGRSATQLTFDLARALAKTWRAGDEVVVSRLDHDANVRPWIIAAESVGATVRWIDFDPATAEVDVDAARAQLTERTRLVAITGASNVLGTKPPVRAIADAAHALGALVHVDAVHLAAHAPIDVAELGADLLVCSPYKLLGPHCGVLAADPALLDTIHPDKLAPSSDAVPERFELGTLPYEVLAGATAAVDVLASLSPTPHAHRRDRISDGLHAIDAHETRLRERIERELTAFGDDVVLHSRASDRTPTLLVTLPGRSTAEAAQHLADRDVAAPSGSFYALEPFRRLALPGDEALRAGLAPYVDDRDVDRLLEGLAEFLGR
>NZ_CP027942.1|WP_137754666.1|165684_167178_-|amino-acid-permease
MATDPTTDRPLGSRGDAAAVAGGEPLPTKRLRTRHVTMITLGGIIGASLFVGSANIIRETGPAAMLSYLIGGLLVFLAMRMLGEMAAARPAVGSFMEYARVGLGDWAAYVVGWLYWYFWVGVIAYEAVVGGGMVHAWFPAIPAWLASLVLLAIFVTTNLISLRSFGETEFWLASIKVVAIVVFLVAGVLFALGLWPGATMSVGNLWEHGGFMPNGFGVVLTSVALVLFSYFGTEIAVMAAAESEDPAKGIKQAAKTVIWRVMLFYVGAILVIVTVVPWDELPSPDVIAPFSYVFDLFGVPGAETIMQLVIFTAVISVLNSGTYSASRMFAALAEQGLAPRAVAKRSRRGVPVLAVVASTIGGLVATLVNFLAPSSGIYEFIMNSTGLVALFVYVFIAVTQWRLRSRMTAEEREGLQLKVWLFPWLNVVLIAAAIGIVGIMLLSDSGRVQVLTSVIAAGALVLFWPLVRRGLQRRRAAGIPDGERVPVEAAESAAEQR
>NZ_CP027942.1|WP_137754667.1|167286_168213_+|LysR-family-transcriptional-regulator
MRRLRRRIYAATMLDLPRLVILRAVQLHGGITAAARELQYSHSAVSQQLSVLEREVGVPLLERRGRTVGLTAAGIELVRSTEAILAAVERAEADLARSQREPRGVVTIAAFASIARSVLPLALRRLAVDAPHLEVHVELHVPEEAAVRLAARQVDAVLTDAFPGTEVPEADGIHATPLTSDRVRGYLPAGTDAADLAALREVPWVLEPVGAASRQWALRVCREQGFEPRIAHVSSDILFHLRMAEAGLAAAFVPDLVVREAASDAVWSDALPSGDRGILFLVRSGAEAHPALVAIRDAVRAAIGEFEA
>NZ_CP027942.1|WP_137754668.1|168328_169627_+|aspartate-aminotransferase-family-protein
MTLTDPTTSSDAGAVLDGPALWSAQAHMPTVLGRQLVIDRGEGAYVVTTEGQRLFDGTAGLWHANVGHAHPELAQAAYDQMRRLETYHVFARYANDKAIALGERLAAIAPMERAKVILNSGGSDSIDVAAKLARRHWQREGRAEKTIVLSRDLSYHGLHAFGTSIAGLPFNREGYGSDSLVPETARVAQHDLADVERTILELGPERIAAIVTEPVQGTGGVHPPAPGYLEGLQRLCREHDILLVLDEVITGFGRTGTMFAAQRYGVEPDLVTFAKGVTSGYAPLGGVLVSPRIWEPFYVDSVETPIFRHGVTYAGHATASAVALAHLDVLERDGLVARVGELEAVLRQQLDGLAARQAGVVDVRVAGLLGGVELAPELDAVRVTDALVDLGFISRPLRGNTLQLSPPFIIADEELVSFVAAIEHAIIQEGNR
>NZ_CP027942.1|WP_137754669.1|169623_171108_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MTIADTTRRELLAGDPERIARADRVIAGLGLPSTGIAVADPATGETIATVADQDASAALAAVGTADAAGRSWARTTPRQRADVLHAWYDLLIAHRDDLAHLIVREMGKPLAEAYGEVQYGADFVRWYAEEAVRPRGDYRESPNGGAQIITRRSPVGLSVLITPWNFPLAMATRKIAPALAAGNPAIVKPAALTPLTTIFAVQLAVQAGVPADLVQVVTTSSASAFSTAVLRDPRVRKVSFTGSTPVGRTLLELASVNVLRSSMELGGNAPLLVFDDADLERAVDGAYAAKMRNVGQSCIGANRIYVQDGIADAFVEGLTERLAAATVGSGFGEAAVGPVIDDRAATQMQQYVDDALEHGATLRTGGHGFDGAGHFYAPTLLDHVDPTSLVARSEIFGPIAAIQRFGTQAEGVERANDTEFGLAGYVFTESLDRAFDVADALQTGIVGINQGVPSNAAAPFGGVKQSGLGREGSAEGLEEYESIRYFSLARRATS
>NZ_CP027942.1|WP_137754670.1|171109_171874_+|SDR-family-oxidoreductase
MPRAADDRRVALVTGATSGIGAEIARRLVGDGWHVVVHGRSAERGTALVAELAPHATLVVADLRDDGAADEIVAEVLAERGRLDALVSNAAVDHAAPLLDVPAADVRATFATNALAAIAMLQAAGRAMRDAGRGGSIVQITSRLASIGVPTMGIYSATKGALQSLTTAAAVELAPHGIRVNAVAPGMTRTPLYDEWVARQSDPAATEHRVAAAIPLGRIATPADVAAAVAYLVRDDAAYVTGVTIPVDGGYLAQ
>NZ_CP027942.1|WP_137754671.1|171908_172961_+|tartrate-dehydrogenase
MTTTYRIDTIPGDGIGVDVTEAAVRCVDAVGAAHGFAIDWRVRDWSSDRYRATGRMMPVDGIEQLSDGDGIYLGAVGTPDVPDDVTLWGLLIPIRRAFDQYVNLRPMRLLPGVQGSMPGLEGLDVLVVRENVEGEYSTIGGRFGSGESETAIQEAVFTRKGIARVTRFAAAHARSRGGTLVSATKSNGIIHTMPFWDEVVAETVAAEAPEVVVEKVLIDALAARLVMKPTSVSTLVASNLFGDILSDLVAGVAGSIGIAPSANLDPERRFPSMFEPVHGSAPDIAGKGIANPVGALWAAAMMLEHLGETAGAAALTSAFEQVLADGTATPDLGGSATTTSFTDAVVARLG
>NZ_CP027942.1|WP_137754672.1|173040_174066_+|cation-transporter
MSAGHDHHDHGHDHDHGHAFPATHPARPEADGGHGGHGHSHGLDGHATATGKHRMKLVVVLCITASIFVVQLIGAFIANSLALLADAGHMLTDATGVLIALIASLLATLAPTSKRTFGLMRVEVLAALANGIILGVIAVVIVIEGIKRFGTEVEVAAGPMLIAAIIGAAANLVCLLILQSGQKESLNVRGAYLEVLGDLLGSVAVIVAGIIILITEWYVVDQLASFAIAAMIAPRAYSLLRDVLRVLLEATPKDVDLDATRTHMLSVPGVVDVHDLHAWTITSGVNALSAHVVLADEIGTDEFHSILDELHACIGAHFDTDHCTLQLEPLRHVSHEGLQHA
>NZ_CP027942.1|WP_137754673.1|174213_175884_+|ABC-transporter-ATP-binding-protein
MAQTTTTAHEVNMHKLDVTDLRIAIGGRTIVDRISFSVAPGQRVCLLGESGSGKSLTAGAVIGRLPSHAVVDGSITVGGTEVLGVAASRRPDHARVATVFQDSAVALNPLVRIKDQLVEPLRRHRGLTRKEATQAAIDLAESVGLPDPARTVELFSAELSGGQRQRVCIALALACDTGLLVADEPTTALDVVTQKRVLDVLQTYTAGERTPSLLFITHDFGVAAELCTDAVVMRSGEVVEQGPLSTLFTAPRHEYTRSLVAAARAATLEPATARLREEPAVAAEPERATFLDVQGVGKTYVVPGRRLFSSPEERVALEPTSLTIEAGERVGIVGVSGSGKTTLLRLMLAIESATTGEIRCEGTDVRPGPVRSLAWYRRKVQYVPQDPASTLDPLMTVEALLQEPLVRLRVPGDHAAMAAEALESVGLDEGYRRRRVHELSGGQAQRVAIARAIATHPDLLLADEPVSGLDLPMRESIVGLLQEISRTRGTGIVVVSHDLSMVASLCERTIVMHGGAVIEDQPTLQVLTAPQHERTRDLLASIPSLDRATPQLVGAE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_2

1813677-1813810

Orphan

Consensus_repeat	Method
CGAGCCTCGAAAGGAGCACCGACCCTCACACCCCGGCCACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027942_2

>merge|NZ_CP027942|2|1813677-1813810|CRISPRCasFinder
CGAGCCTCGAAAGGAGCACCGACCCTCACACCCCGGCCACCCGCCTGACCCGTGCCGTCTCTCCCAACCGCTCCTTGAGGTGCGAGCGCACCGAGCCTCGAAAGGAGCACCGACCCTCCCACCCCGGCCACCCG

>NZ_CP027942|2|1|1813677-1813810|CRISPRCasFinder
CGAGCCTCGAAAGGAGCACCGACCCTCACACCCCGGCCACCCG	CCTGACCCGTGCCGTCTCTCCCAACCGCTCCTTGAGGTGCGAGCGCAC
CGAGCCTCGAAAGGAGCACCGACCCTCCCACCCCGGCCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137756032.1\|1824791_1825415_-\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377456
NZ_CP027942.1\|WP_137756018.1\|1803103_1804018_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP027942.1\|WP_137756020.1\|1804402_1804885_+\|sodium:proton-antiporter	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756025.1\|1814176_1815967_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|367155
NZ_CP027942.1\|WP_137756016.1\|1801150_1802206_-\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl\|CDD\|225224
NZ_CP027942.1\|WP_137756028.1\|1818367_1819651_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853
NZ_CP027942.1\|WP_137757277.1\|1816873_1817896_-\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP027942.1\|WP_137756022.1\|1806332_1808261_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_CP027942.1\|WP_137756024.1\|1810361_1811198_+\|Ku-protein	unknown	unknown	gnl\|CDD\|238408
NZ_CP027942.1\|WP_137756019.1\|1804092_1804350_+\|Rho-termination-factor	unknown	unknown	gnl\|CDD\|377850
NZ_CP027942.1\|WP_137756027.1\|1817898_1818366_-\|transcriptional-repressor-NrdR	unknown	unknown	gnl\|CDD\|234774
NZ_CP027942.1\|WP_137757276.1\|1811223_1813560_+\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|236599
NZ_CP027942.1\|WP_137756029.1\|1819722_1823223_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP027942.1\|WP_137756017.1\|1802216_1803071_-\|EI24-domain-containing-protein	unknown	unknown	gnl\|CDD\|377798
NZ_CP027942.1\|WP_137756023.1\|1808309_1810277_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756021.1\|1804881_1806336_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_CP027942.1\|WP_137756033.1\|1825539_1825878_-\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NZ_CP027942.1\|WP_137756026.1\|1815720_1816677_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_CP027942.1\|WP_137756031.1\|1824212_1824791_-\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|237810
NZ_CP027942.1\|WP_137756030.1\|1823295_1824213_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756032.1\|1824791_1825415_-\|DivIVA-domain-containing-protein	gnl\|CDD\|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	4.24398e-10
NZ_CP027942.1\|WP_137756018.1\|1803103_1804018_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.29052e-21
NZ_CP027942.1\|WP_137756019.1\|1804092_1804350_+\|Rho-termination-factor	gnl\|CDD\|377850	pfam07498, Rho_N, Rho termination factor, N-terminal domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers. This domain is found to the N-terminus of the RNA binding domain (pfam07497).	1.30683e-08
NZ_CP027942.1\|WP_137756025.1\|1814176_1815967_+\|HNH-endonuclease	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	5.35156e-21
NZ_CP027942.1\|WP_137756016.1\|1801150_1802206_-\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	5.06948e-21
NZ_CP027942.1\|WP_137756028.1\|1818367_1819651_-\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0
NZ_CP027942.1\|WP_137756024.1\|1810361_1811198_+\|Ku-protein	gnl\|CDD\|238408	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku. The alignment includes the core domain shared by the prokaryotic YkoV-like proteins and the eukaryotic Ku70 and Ku80. The prokaryotic Ku homologs are predicted to form homodimers. It is proposed that the Ku homologs are functionally associated with ATP-dependent DNA ligase and the eukaryotic-type primase, probably as components of a double-strand break repair system.	9.78782e-115
NZ_CP027942.1\|WP_137756022.1\|1806332_1808261_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00020511
NZ_CP027942.1\|WP_137757277.1\|1816873_1817896_-\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	1.87341e-162
NZ_CP027942.1\|WP_137756030.1\|1823295_1824213_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.66064e-101
NZ_CP027942.1\|WP_137756027.1\|1817898_1818366_-\|transcriptional-repressor-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	5.7761e-75
NZ_CP027942.1\|WP_137757276.1\|1811223_1813560_+\|ATP-dependent-DNA-ligase	gnl\|CDD\|236599	PRK09632, PRK09632, ATP-dependent DNA ligase; Reviewed.	0
NZ_CP027942.1\|WP_137756017.1\|1802216_1803071_-\|EI24-domain-containing-protein	gnl\|CDD\|377798	pfam07264, EI24, Etoposide-induced protein 2.4 (EI24). This family contains a number of eukaryotic etoposide-induced 2.4 (EI24) proteins approximately 350 residues long as well as bacterial CysZ proteins (formerly known as DUF540). In cells treated with the cytotoxic drug etoposide, EI24 is induced by p53. It has been suggested to play an important role in negative cell growth control.	5.79902e-16
NZ_CP027942.1\|WP_137756029.1\|1819722_1823223_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP027942.1\|WP_137756026.1\|1815720_1816677_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	3.2915e-15
NZ_CP027942.1\|WP_137756021.1\|1804881_1806336_-\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.13282e-54
NZ_CP027942.1\|WP_137756031.1\|1824212_1824791_-\|signal-peptidase-II	gnl\|CDD\|237810	PRK14764, PRK14764, lipoprotein signal peptidase; Provisional.	9.15854e-53
NZ_CP027942.1\|WP_137756033.1\|1825539_1825878_-\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	0.00252953

>NZ_CP027942.1|WP_137757276.1|1811223_1813560_+|ATP-dependent-DNA-ligase
MRVGGRTLGVSNLDKVLYPDAGTTKADVIAYLQEVAPVMLPHVRDRPVTRKRWVHGVGTAEDPGEVFFVKALEQGAPSWIPRRPIEHKEGPKEYPLVEDAATLAWLAQMAALELHVPQWRFGPDGARRDPDRLVLDLDPGEGAGLAQCQEVALLARDLLEDMGLRPLPVTSGSKGIHLYARIDGLDAEQASALAKAIAVSLEELHPDLVVSSQRKASRVGKVLVDWSQNSGAKTTVAPYSLRGRPTPTVAAPRTWREIESDGLAQLTYREVLERVARDGDLLAPLAPPPMVDRLAVYRQKRSADRTPEPVPDEAPQPTYGRSFVIHEHHASSLHWDLRLEHDGVLMSWAIPKGIPTSGEKDRLAVRTEDHPLEYGRFEGVIPKGEYGAGEIRIWDAGDYTVKDWDPGLKAVTLHGRPDGGLGGSPVRIALVQTDGDQWLCHRMRLPTASAERSQRSRGAAVPRTPSPMLASTRSLADVGDGWVFEPKWDGWRALVTVDGDDVRLRSRSGQSLTDGFSELLAPIRQAVTAERAIVDGELVAGAGGGDFSSLQGRLGDPRARGRAVDRGEPVALVLFDALEVDGRSLLRLPLAERREELERIVVPSDRVAITEQLSGSAAAIVEASQRLGIEGLVAKRLSSTYQPGARSDDWRKVVHVRTHEVAVVGWLPGEGSLGRTFGSLVLAAPDADGRLRYAGRVGTGFSARDRATIRERLPDQTRASRAVDDVPPDVARAMTWMRAAVGEVRFTAVTEAGAFRQPVWRGLRPDKSLDDLTPLPDR
>NZ_CP027942.1|WP_137756024.1|1810361_1811198_+|Ku-protein
MRAMWKGSIAFGLVNVPVKLYSATETHDVRLHQVHDEDGGRIRYQRKCEVCGEVVPYEHIDKAYEEDGKTVVLRDEDLKSLPVERSREIEVVQFVPSKQIDPIRLEKSYYLEPTGSALKAYTLLRRVLDETARTAIVRISIRQRQRLAVLRVHDDVLMVQTMLWDDEIRAAEFASLDERPRIAAKELDLAKAIVKELSGDFAPEEYEDDYQVQLRQLVDAKLEQGDAIDTAATFGEEAEEAEVLDLMEALQRSVERRKGAKADAKGAKGSGSKRSKSA
>NZ_CP027942.1|WP_137756023.1|1808309_1810277_-|hypothetical-protein
MAGDERGGMAQRRRRSWRDHDRGRSAEAASRVDDGSERWRRPRARTRVATPPEPVGPPPPVRRLLVEVDGSPVEVGSLRVEGEPSPQELLGSLATLGLDDLDAEVRASQAALAASLRVERSPRTALLRALAVARRVLRWRGWPPVAGLVGFAAALVVLCAPIWVSARRDVDLRGELEATALLTGAGAFVLVGLPLSLTIEPRRPTAAPAGRPGVGAGGVLLMVGLLVWMLVPIVVLVVRTSSLSAWQPGIVAGLAVHAAALVAWVVLLIVLRRGPIVLEPAAHAPSARTAPPEQAIVALERTFRGRLAALDAGDWTALRSAVASQTDRLVASGTVDAGARAAMLRVGPTGVALDAALAARLAHDPSVEVVLRPHLPVPVVAAVIGGRPRSAGLVRRVVREVAGERLAVGLPFDAAVLVDLVAAARVPILARDRRLAIALSRLWPTVVLAGWGTALGSLAATLAWLPEAAAFREPTSPSAAVAFAWIAAVLLALVDVRERVGSLRARPTTLGWIATAACAGIAASLVAGAGASSPYLRGLRAGDVAMLAVVALVALAAGGWRVAEALGGRRHDAVHPGSAEWPLSRARAAQVEADRRRRALVQDALLDEVADELEPALRLAVDLGRLDAAVLNSVATAARRASWSREADARDADDA
>NZ_CP027942.1|WP_137756022.1|1806332_1808261_-|hypothetical-protein
MSPGRGERPMTADRRDADAASALERRWSRHDDGAQDAGAVRAPDAPAHPGLGAASATIAVLDVDPRASLSDQALRDALATLVLTRSDAELRRAQEALVGAFAVAGTTLGRIARLEGRARAAGRRLGLAGRVAGVALAMAAVIGTVGAPVWLVATDGETLRDDLGACALVAGLSALVVASTVLATGEAGRERGGALRALAPLELAAGLVSLMLWAATFAIVVLRAGELQAFSPAVAAGLLLQCLAGVVGVCAVVVAVAPQLLGRSAAEPSLGVVLATPSVRLRALAARFDDSIRSLDAAEGRELVEAMRAWTARLIERGILSTRAWDAVARIDVRRLRLDAHLAARCALAPDAPVVLRPSLPIGAVTAVLDGGAHGGRLVRRIVQAVSGRRSRRHVPWEAGMLVDLVAAARVPVLEDDAPLPIVRAYGRTVLLVVASSAIAAATWALGAWRAVAADATDVAAPAATLALLGLAAALVAAADVLERAGGVRSAPTTTAWAILALAAGAASGVVAAATPYSAYLVQARAPWAVALAALAVAAAPPCVVRLAARLRGRPHDAVQWTSASWPMTRASVDAHEARRRARIAAASAAHVDALVERVAPAIALAVDVGLLEPRVLASLPHPARHAAPAECAPTAAGSPSR
>NZ_CP027942.1|WP_137756021.1|1804881_1806336_-|MFS-transporter
MSTSSAPAASAVGLRSERGPLLLAMMLSTGLVAIDATILSTAVPTIVDDLGGFASFPWLFSIYLLTSSVTTPIYAKLADTIGRKPVMLFGIGAFLVGSLLCGVAWDMPSLIAFRAVQGIGAGAILPVSMTIVGDVYTLEERARVQGYLASVWAISAVVGPTLGGIFAQLDAWRWIFLVNVPLCILAGWLVITRFQERVERTTHRLDWLGALLLTGSLSLLILGVLEGGRAWAWASPISIAVLGVGAVLLALFVVVERRAAEPILPPMLLTRPLLRTTALMGLAIGGGLIGLTAYVPTYLEGSIGLAPIWAGLALATLTIGWPIAASLSGRLYLRIGFRATTIVGGVILVVGAVTLAALAGAPSPWIVGALCLLVGLGFGFTAVPSVVAAQASVDWSERGVVTGAQMFSRSIGQAIGAAVLGALANATVDAAGGDASDPATIVSASQVVFVGTAVLAVLVLVAAIAMPRDRGVHAAQAAEEPAAG
>NZ_CP027942.1|WP_137756020.1|1804402_1804885_+|sodium:proton-antiporter
MDDDVPGDGRDETANERLDRNWQDILQELRVALTGTQLISGFLLAVAFQSRFEDLTPELVVHYLVLVGLAALATLLGLAPVAVHRLLFRRRVKAATVRLGNRLLLATLVVVTLLVIGVAAFVFEFVAGAVAGLVAAAVAALVACGMWALGIGARLRARSD
>NZ_CP027942.1|WP_137756019.1|1804092_1804350_+|Rho-termination-factor
MPNPSIKDEELYRELREDGASAEKAARIANAAARDGRKAVGRRGGTAEDLEDRTVPELRARAKELGITGYSGLRKQQLVDRIRSH
>NZ_CP027942.1|WP_137756018.1|1803103_1804018_+|EamA-family-transporter
MSDPRPRHTAAVLAAAVLWGTTGTVAHFAPEGSSPLLIGMATFGFGGLVLAVISWRAVARVLRDRRAWGWLLAGGAGAVLYPTAYYPAMDLAGVAVGNVLALGSGPIFAAALEWALDRRRPTVRWGIATAIAAVGVAALAVASGESTTGTNPIAGILLALAAGVGYALYSYSGARLIAGGRSSQGSMAAVFLVGSAVMLPLFLLLGPGPLASGHGALTVAYLALVPMAASYLLFGFALRALTASTATTLALAEPVVATLLAVVVVQERLSALAWAGLAAVAVGIVLVSVPARGLGALRARMRVR
>NZ_CP027942.1|WP_137756017.1|1802216_1803071_-|EI24-domain-containing-protein
MLQAVAGCVGEDVRVRRIRSLLHGMSILAAGLRLSWRNPRLAILGMVPPIVVGVAFVVGLVVLGLNALSLATALTPFADGWADPWPDVTRVVLAIAIVAGAGVLGVLLFAAVTLLVGAPFYERIWRRAEDELGGIRDEVELSIGQSIAKGIDDGLRLAGVAILTGLVVVLLGLIPGVGTILGWVGGALVGSRALAVELSGMPADARGLSLDERRRLLDAAPDVARGFGLAVYLLFLVPGGAVLCTPAATVGGMLLVRELRGEPTGPLARDRAVADEAPPPPPLA
>NZ_CP027942.1|WP_137756016.1|1801150_1802206_-|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MSGPFTVRAATRDEIGDWDDLIARNPDGGHMVQSAAFAEVKRGDGLEPRFLVIEGPQTIHVLALEGRVWLGRYWYVPLGPTGDDLEGIVAALRAYARAQPGLLVVKIEPRLERTDALVARLTAMGLEPSRDMQVQTHTVVLDLAQGAEALLASFSQSTRRHIRKAERDGYRVERVDVTPETRDRMHAMMQTVAGGKGMEGMRERAYYDRFWQAFADHGTGQLYLGFDDDGDEPQAGIFVTFSGRTAVYKDGGSRPDRRIAGGAPLLLYTAMQDAIARGCTAFDLAGTPPADRLDDPEHPFHGLGQFKTRFGPVTSHLPSFDLVLHPVRHRLWEHGLRRIEWRLRPGPDTLR
>NZ_CP027942.1|WP_137756025.1|1814176_1815967_+|HNH-endonuclease
MAQEIDGTAPGPDPAALAAIEANALSQLAALRFGRQALEAYELRLLASLGHLALERAGGGSSERSAMELRSIAAEIGVQARVSDRTVERQIGDAMHLVDTWPLVLDAFADGRISRGHVRAITEAGSVLSSSDVTAEQRAAYEERMVALAETTTPARVAKAARKAADAQLAEPLVDRHRAARDDRRVTIEPADDGMAWIGAYVPAVLAHGIDHRLRAGARTKPKDDPRTIDQWRADAFCELLLTGSGAPDGATQSVGADDATEHAGLLSTVRPVVQVTIPVTTLTGHDDAPATLDGVQPIDAETARILAVVAATWERLLTDPIRGTVVEVDTYQPTAAQRRLLIARDQHCRFPGCASHARTADVDHTIAWDHGGTTSLSNLAHLCRRRHTLKHATAWTVHQPRPGHLHWRSPLGEDYVDRPPATGPTFTDASESTAAIAAADAWGPPTAATDAGSGFQQPTFQRSPSPLPLGSRALRLPDWSQPELARATNGPDDPPHGPPTVLRAPLRRMDTLAAWTRARPHRRRPTIAFVASAERTSACRHSPAPRGGSPCSWSPACARRRSATYRPCSSPRSTSRCSSQHRRSPPPASDGRRGS
>NZ_CP027942.1|WP_137756026.1|1815720_1816677_+|isoprenylcysteine-carboxylmethyltransferase-family-protein
MDSSAPASPPPDHRLRRLGRAYFGVQALAGAAWWIAVFVVPGVREATLGDLPPVLVAAFDIPLFVAASAIAAAGIRWAAWLVTAWTLLVAVGMAGYATVTQLAGIGAVLMLAAAAASVAAACLVLLGRVPSELVVRGPFAFAVAPVAAARANGARTAGQIVVFWGTFLIVLPILIALVEARWQLRVEPPPIVQAAGILLFVAASVLGIASARAMVTYGEGTPLPSAQPRRLVVAGPYRWVRNPMAIAGIVQGIAVGLAIGSWMVVVWAAAGSLVWNHVVRPEEEADLLARFGADYAAYRDRVRCWVPGHPLPPGHERA
>NZ_CP027942.1|WP_137757277.1|1816873_1817896_-|quinone-dependent-dihydroorotate-dehydrogenase
MYGALYDHVLTRIDAERAHHLGAIVVRAAGRVRPGVRTDPSLRVRALGREFPTPFGLAAGFDKDASMIAGLGALGFGHVEVGTVTAIPQPGNDRPRLFRLVADAALVNRMGFNNAGAEAAAERLRAARRARSRPVIGVNIGKSRVVDVDDAIDDYLVSTRLLAPLADYLAVNVSSPNTPGLRGLQDEERLAPLLEAVRDAAGATPVLVKIAPDLDDEAIEGVATLVQRLGLAGVIATNTTIARDGLVSDAALVEAAGAGGLSGAPLRARSLEVLRVLRRVLPRDVCVISVGGVTTAEHVAERLAAGATLVQGYSAFVYEGPGWAARINRELPALLAAARA
>NZ_CP027942.1|WP_137756027.1|1817898_1818366_-|transcriptional-repressor-NrdR
MHCPFCRHPDSRVVDTRSSDDGLSIRRRRQCPRCERRFTTTESASLLVVKRSGVVEPFSRDKVIEGVRKACQGRPVTDADLATVAQSVEEAIRATGVSQIDANDIGLAVLPPLRELDEVAYLRFASVYQAFESLEDFESAIEGLRRDHGVQRADA
>NZ_CP027942.1|WP_137756028.1|1818367_1819651_-|histidinol-dehydrogenase
MLRRLDLSARADLPELPRAAHDVDRALDAARTLIEAVRAEGAEALLAQAERFDAVRPAALRVPQAALDAALAALDPAVRAALETAIARVRLATAAQVPPPASTTLAAGAVVEQRWMPVARAGVYVPGGKAVYPSSVVMNVVAAQVAGVERIVLASPPQADHDGLPHPTILAAAALLGVDEVLAAGGAGAIGALAYGVPGVVDAVDVVTGPGNVFVAAAKRVVGGHVRVDSEAGPTEILVIADATADADLVAADLVSQAEHDELAAAVLVTDSVALADAVDAALEVRVAATPHAGRVRVSLTAEQSATIIVADVDQAIAVSDAYAPEHLEIMTADDDAVTRRIRNAGAIFVGPATPVSLGDYAAGSNHVLPTGGQAARVSGLGAATFLRPQQVVRYDLEGLRGVADAVVALAESEDLPAHAEAIRARL
>NZ_CP027942.1|WP_137756029.1|1819722_1823223_-|DNA-polymerase-III-subunit-alpha
MAEQFAHLHVHTEYSMLDGAAHVGPLVEAAVEQGMPAIAMTDHGNVFGAFDFWSKATAAGIKPIIGMEAYVTPGTHRSDRTRVKWGDDAGGDDVSGGGSYTHMTLLAETTEGMHNLFRMASLASMEGYYFKPRLDRELLARYSEGIIATTGCVGGEVQTRLRLGQYDEARRAAAEFRDIFGKERFFAEVMDHGIDVERRTMGDLLRLAKELDLPLVATNDLHYTHASDATAHSALLCVQSGTTLHDPKRFKFDGEGYYLKSAAEMRHIFRDHPEACDNTLLIAERADVRFDTSANYMPRYPVPEGHTEESWFRAEVAAGLERRYPAGIPERVQAQADYEMGVIAQMGFPGYFLVVADFINWAKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFDDRRRGEVIRYVTEKYGTERVAQIVTYGTIKSKQALKDATRVLGQPFGLGERLTKAMPAPIMAKDIPLSGITDPEHPRYKEAGDFRAILDADPDARTVYDTALGLENLKRQWGVHAAGVIMSSDPLIDIIPIMKREQDGAIITQFDYPTCEALGLIKMDFLGLRNLTIISDALDNIVANRGETLDLETLPLDDRGAYDLLARGDSLGVFQLDGGPLRSLMRLMRPDSFEDISALIALYRPGPMGANSHTNYALRKNGQQAITPIHPELAEPLAEILEESYGLIIYQEQVMAIAQKVAGFTLGEADILRRAMGKKKKAELDKQFAGFSQGMLDRGYSMSAVEKLWEILLPFSDYAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDSKDKMALYLSECRRMGITVLPPDVNASSLRFTAVGDDIRFGLGAVRNVGANVVDAIVAARSPEPYESFHDYLKKVPVAAANKRTVESLIKAGAFDSMGSTRRALLEVHEAAVDQAVTDKKREEFGAVGFDFDALWDEPEHQQKVPERPEWVKRDKLAFEREMLGLYVSDHPLAGLDLELAKHASHQIQTLADDCEDGDTVTIAGLITTAQHRVARQSGNPYGILTIEDFGGEVDVMVLGKTYTAFQHDMAADRIAVVKGRFRTRDEGFTLHANHLEFPDLLPVDESKPLELRLMERRATLAVTRDLRAVLERHQGPTEVRMRLERPGAARVFRLQHQVQISSALFGELKSLLGPSALV
>NZ_CP027942.1|WP_137756030.1|1823295_1824213_-|RluA-family-pseudouridine-synthase
MEERSLIVPPGLDGQRADAGIARVLGLSRTAVAEAIEAGGAVQDGRVLGKSDRLRGDAWLEVRWEARREPTIEPIPVPELGIVHDDDDLVVVDKPAGVAAHPSMGWTGPTVVGALAAAGYRISTSGAAERQGVVHRLDAGTSGLMVVAKSERAYASLKAQFHDREVEKVYHAAVQGRPDPLRGTIDAPIGRHPSHEWRFAVVSSGKHAVTHYETLEAFRDGSLVEVHLETGRTHQIRVHMAAQRHPCLGDAMYGADPTLSARLGLERQWLHAVRLGFTHPGTGEWLESTSEPSADLRHALEVLET
>NZ_CP027942.1|WP_137756031.1|1824212_1824791_-|signal-peptidase-II
MTASRGVAWRLVALIVGLAAVVWAVDLLVKEWVLATLPEGRQVQVLGEVLQWHFVRNPGAAFSLAAGMTWIFTLISAVVAVAVVVVAFRVRSLPWAIVLGCLLGGVVGNLTDRIIREPGGLQGHVIDFIQVWGFPAIFNVADMFVVCAMGAFIVLVLRGEGIDGVRRTDEPGAEPEPAAEESAEPEARSSAD
>NZ_CP027942.1|WP_137756032.1|1824791_1825415_-|DivIVA-domain-containing-protein
MALTPNDIVERTFETTRFRDGYDQDEVDNFLDEIVTEFRKVIAEKERLEARVAELEAGAPAAPAAAAPAPEAAPEPVVEQQPAATSEADASASAVSPEGLLALAQRVHDEHVAEGQRRKDELVAEAETQAAEIETAATKRRADLEREFEKTKSALEQEKSDLETKIDELKTFERDYRLRLRGYIESQLRDLDRTSFAFGGSGAPAQQ
>NZ_CP027942.1|WP_137756033.1|1825539_1825878_-|YggT-family-protein
MAAARRSARPTPSPTDVQVVALVVYVAANVLFYVLWARVILDVVRQVRRDWKPRGLWLALSVAILTLTDPILRVARRVVKPIRVGGAMLDLSMLAVMAIVLVVVVVSGALAS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_3

1918904-1919014

Orphan

Consensus_repeat	Method
GAGGAGCGAGCGAAGCGAGCCTCGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027942_3

>merge|NZ_CP027942|3|1918904-1919014|CRISPRCasFinder
GAGGAGCGAGCGAAGCGAGCCTCGAAGCAAGCCCACCGAGCCTTTCCGCCGCTCCCACCCGACCGCTCCCCTGCAACCGCTCCTTGAGGTGCGAGCGAAGCGAGCCTCGAA

>NZ_CP027942|3|2|1918904-1919014|CRISPRCasFinder
GAGGAGCGAGCGAAGCGAGCCTCGAA	GCAAGCCCACCGAGCCTTTCCGCCGCTCCCACCCGACCGCTCCCCTGCAACCGCTCCTT
GAGGTGCGAGCGAAGCGAGCCTCGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137756111.1\|1924131_1924764_-\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
NZ_CP027942.1\|WP_137756109.1\|1922116_1923241_-\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|235824
NZ_CP027942.1\|WP_137756108.1\|1921466_1922135_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP027942.1\|WP_137756098.1\|1911297_1912425_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376164
NZ_CP027942.1\|WP_137756103.1\|1915135_1915594_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319925
NZ_CP027942.1\|WP_137756104.1\|1915661_1916981_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137757285.1\|1919919_1921389_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|179525
NZ_CP027942.1\|WP_137756113.1\|1926700_1926952_+\|DUF3253-domain-containing-protein	unknown	unknown	gnl\|CDD\|371633
NZ_CP027942.1\|WP_137756097.1\|1910715_1911099_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP027942.1\|WP_137756107.1\|1919112_1919916_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|224777
NZ_CP027942.1\|WP_137756101.1\|1913101_1913851_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376187
NZ_CP027942.1\|WP_137756105.1\|1917044_1917896_+\|pyridoxal-kinase-PdxY	unknown	unknown	gnl\|CDD\|235592
NZ_CP027942.1\|WP_137756099.1\|1912434_1912875_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137757286.1\|1924753_1925521_-\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|280735
NZ_CP027942.1\|WP_137756114.1\|1927217_1930685_-\|TM0106-family-RecB-like-putative-nuclease	unknown	unknown	gnl\|CDD\|225160
NZ_CP027942.1\|WP_137756110.1\|1923391_1924135_-\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP027942.1\|WP_137756102.1\|1914069_1915044_-\|arsenic-resistance-protein	unknown	unknown	gnl\|CDD\|223869
NZ_CP027942.1\|WP_137756106.1\|1917906_1918836_+\|(p)ppGpp-synthetase	unknown	unknown	gnl\|CDD\|225232
NZ_CP027942.1\|WP_137756100.1\|1912879_1913092_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277316
NZ_CP027942.1\|WP_137756112.1\|1925678_1926566_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756111.1\|1924131_1924764_-\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	1.06379e-57
NZ_CP027942.1\|WP_137756109.1\|1922116_1923241_-\|prephenate-dehydrogenase	gnl\|CDD\|235824	PRK06545, PRK06545, prephenate dehydrogenase; Validated.	1.53628e-114
NZ_CP027942.1\|WP_137756108.1\|1921466_1922135_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	1.77566e-60
NZ_CP027942.1\|WP_137756098.1\|1911297_1912425_-\|hypothetical-protein	gnl\|CDD\|376164	pfam18742, DpnII-MboI, REase_DpnII-MboI. REase Fold fused to DpnII/MboI-NTD.	2.71866e-48
NZ_CP027942.1\|WP_137756103.1\|1915135_1915594_-\|VOC-family-protein	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.48019e-07
NZ_CP027942.1\|WP_137756113.1\|1926700_1926952_+\|DUF3253-domain-containing-protein	gnl\|CDD\|371633	pfam11625, DUF3253, Protein of unknown function (DUF3253). This bacterial family of proteins has no known function.	1.41813e-25
NZ_CP027942.1\|WP_137757285.1\|1919919_1921389_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|179525	PRK03003, PRK03003, GTP-binding protein Der; Reviewed.	0
NZ_CP027942.1\|WP_137756097.1\|1910715_1911099_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.1105e-06
NZ_CP027942.1\|WP_137756107.1\|1919112_1919916_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	1.53547e-47
NZ_CP027942.1\|WP_137756101.1\|1913101_1913851_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	0.000733292
NZ_CP027942.1\|WP_137756105.1\|1917044_1917896_+\|pyridoxal-kinase-PdxY	gnl\|CDD\|235592	PRK05756, PRK05756, pyridoxal kinase PdxY.	3.27722e-158
NZ_CP027942.1\|WP_137757286.1\|1924753_1925521_-\|segregation/condensation-protein-A	gnl\|CDD\|280735	pfam02616, SMC_ScpA, Segregation and condensation protein ScpA. This is a family of proteins that from part of the condensin complex that regulates chromosome segregation. This is the A subunit, which binds to the ScpB subunit, pfam04079, and SMC, pfam02463, to participate in chromosomal partition during cell division. The condensin complex pulls DNA away from the mid-cell into both cell halves. These proteins are part of the Kleisin superfamily.	4.52781e-44
NZ_CP027942.1\|WP_137756114.1\|1927217_1930685_-\|TM0106-family-RecB-like-putative-nuclease	gnl\|CDD\|225160	COG2251, COG2251, Predicted nuclease (RecB family) [General function prediction only].	1.16242e-61
NZ_CP027942.1\|WP_137756110.1\|1923391_1924135_-\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	5.77708e-88
NZ_CP027942.1\|WP_137756102.1\|1914069_1915044_-\|arsenic-resistance-protein	gnl\|CDD\|223869	COG0798, ACR3, Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism].	2.47543e-33
NZ_CP027942.1\|WP_137756106.1\|1917906_1918836_+\|(p)ppGpp-synthetase	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	3.01002e-25
NZ_CP027942.1\|WP_137756100.1\|1912879_1913092_-\|hypothetical-protein	gnl\|CDD\|277316	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.9945e-12
NZ_CP027942.1\|WP_137756112.1\|1925678_1926566_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.04121e-84

>NZ_CP027942.1|WP_137756106.1|1917906_1918836_+|(p)ppGpp-synthetase
MTDPTTAVRRAYETRADAWDAAMGMVEGWLDERADALLADADRMRLVVMPGRIKEEARTVDRLTRAATEIALAEVTVEQVEELVRDVVGVKVLCKSTRDQALMADDVARALEPGIHLVEMRDYVAEPKPSGYRAVHALLDVDVTTPEGTTVVAVEVQIKTRVQDAWGELTHEDLYKPGGGLRPSDFHRSVGRTMANLLAEVDRLADDLAREFDVATAEPASEGARAAVGRIPIRTVVVRSTGPRYALAVDDEGRQGLIPAFAVRALAPTEGHVDVDAFVPEGATLEARVFEDERGLYYLPVALPHVARD
>NZ_CP027942.1|WP_137756105.1|1917044_1917896_+|pyridoxal-kinase-PdxY
MKILSIQSSVAYGHVGNSAAVFPLQRLGHEVWPVSTVVFSNHTGYGAWRGPLLPASDVADVILGIEERGALARVDAVLSGYLGGEAIVDVVVDAVQRTKALNPKATYTCDPVMGNAKSGCFVAPAIPPLIRERVIPHADIIAPNQFELGFLTHTEPATLDETLESVERARDMGPRTVLVTSVERPDRPEGTIEMLAVDDEGAWIVQTPFLPFKANGSGDVTAALFTAHYRTSGSAWDALEATVSSVFDLLQTTLDSGERELQLVEAQEAYAHPRRQFQVRQVR
>NZ_CP027942.1|WP_137756104.1|1915661_1916981_+|hypothetical-protein
MSDEQSANIDRPTQENGVLEQLLERAKQADIKVEVRDLPGTKERRRNTFAMVYLPNGRHERRVLAFPSSFQSLLDEHFEDFVVLGDYVAVVSKSTGAIEAALTARSPAGRNIVAHQLRRLPGIVKNGESDPEVALPLDQDDAGLSRASSLDDWSLSVSNEGVSVTLSAATKAFSTLFDPGPTVKVTGVVTSDHDTALEALERYANGFVFDLDVVYGVPVQIARKSLASRQRRQEAPEHPPAFPRNHYAAQALELYQYGRSASGLPLLEYLAYYQAIEHFFPFFAREQTVNAVRTQLLHPGFDARDDAALYKLINLAGPGGRSGPGEKEQLRATVRACVEEADLKDFIQSLPEYTDHFCSKQQSVKGIGVINIDNSNDLRDQVADRIYALRCRIVHAKQDGGGHADVLLPSSRETESLQADVELVRLVAQRALIARAARV
>NZ_CP027942.1|WP_137756103.1|1915135_1915594_-|VOC-family-protein
MSEAARPTVRQLRIVVEADDHDAAVAFFRDALGLPEQAAYVGEGDERVVILEAGRATLELANPSHVRAIDAVETDGVTSPRIRLAFEVDDAAATTSVLEDAGAEVLATPRETPWRSLNARLQAPADLQVTLFEELESLDERSQRDGFGTGER
>NZ_CP027942.1|WP_137756102.1|1914069_1915044_-|arsenic-resistance-protein
MTDREPSSLADRLERHQAPILLGAVALGFALGVAWPGAHALETIVDSAIALMLLVTFLGVPFGALVEGLRHWRLLATLLVTSFVVAPVVAFALTRLVSHDAGLVAGALLVLLAPCVDYVVVFTALARGAHAGLLAATPVLMVVQVVLLPPLLGITAGQEVVAALDVGRLAAAFGLLVLLPLAIAAAIRLVGRRAPVVDRAASRAVGTVVPVTALVLVVVAASQARRILASADDLVALVPVYVGFAALMVAAGILVSRVARLGVADARAVVLSGVARNSLVVLPVALALPPALALAAPAVVAQTVVELVVLVVLVRLLPRLVCER
>NZ_CP027942.1|WP_137756101.1|1913101_1913851_-|nucleotidyltransferase-domain-containing-protein
MDLTRVQECVEAALGPSASWRLGLLLYGSQARGTARNESDVDVLELVRSAPRASSNGFVNVTQYTPAALESLALNGSLFVTHLKQDGIVLQDPDRILSDVLNKYRPPRDYRSVREQLRIVSGVLDPSALDFARHAAALGGLGIYLLRTALYVDSVERGLPNFDLDSLTSNRAELHALMRDRRRGEWGPEAISLIYGELGRLTAVKRNDVGSVIGYAALHSNRPDLTVMFTSVLSGGRELDYSALTLPPF
>NZ_CP027942.1|WP_137756100.1|1912879_1913092_-|hypothetical-protein
MGLIVVGDVHGCVEPLRLALSWAANFKDRRVVLVGDYIDRGPASKEVIETLIREVVAGRQPHAPRRQSRD
>NZ_CP027942.1|WP_137756099.1|1912434_1912875_-|hypothetical-protein
MNFLAGGQPQQFLANGGLATVRSYLGARSLGNPLEVFREEFPDAHLKFLRSLHLFFEDDSTFVSHAGWDTGRPGDRNPGALTASAPEIFCVGVEPPRPLAVVGHYVQPDGTPHLSDHLIALDTGCGSLSGGPLTAVLLPERVFQQF
>NZ_CP027942.1|WP_137756098.1|1911297_1912425_-|hypothetical-protein
MSTQDLVRQMRDALARGDRVAAIHYSCESFYDVTDRPVAISAIAVTEVHDSTGGQSGRVFSIAGALAHDDALEREKDLLRRFFEYVRAHADTWWVHWNMDNATYGFEALVTRYRYLFNEDAPTSFARDRLLDLDSAIEARYGSGFANHPKLRSLCTLNGYFMAHFSDGKEEARAFGEGDHGLCERSASAKSSLLAKAAVDLFEGRLQTLNSVGTLEYAGERLDAVRVVLDLGEKFLYVERELKHRHGNRPTLEVSDEHDAQDLFRSLLRVFFEDIRPEDYTPSYAGASSRIDFVIPEIELAIELKFARDTMSDKTLGEELLVDRDRYSGRRDVRHLVCLVFDHDGKLRNPRALEADLARKASEESLAVTVRIFDR
>NZ_CP027942.1|WP_137756097.1|1910715_1911099_+|nuclear-transport-factor-2-family-protein
MTSPQLSHDRLLELEHSGWESLRLGVGHEFYGGRMAPDALMVLAHGVALDRDAVVESLDGAAPWDRYDIENVRHVPLGEDAAALVYRATATRGDAPAFHALMTSVYRLVDDVPLLVLYQQTPIPDDD
>NZ_CP027942.1|WP_137756107.1|1919112_1919916_+|DNA/RNA-non-specific-endonuclease
MATPKPRATGYDERFLGVRVPAPTPLDDPSAPVLDSTHFTVTMSRERRLAWSVAWSIDGLRLFPDIPRERRFFPDDRLPLDEQTTEAVYADNDLDRGHLARRADLLWGTLDEARAANRDSFCFTNVSPQTADFNQASRGGAWGELEHAVLDLDRLHERRVVVFAGPVLQPDDPWYRDLVRLPREHWKIVVYRLGDAIRARAFLLAQDLSDVQPAYLDGFQTYEVSLDDLAARTRLDLSGIPVGARSRGSTAVPATPRAITSVDDVDW
>NZ_CP027942.1|WP_137757285.1|1919919_1921389_-|ribosome-biogenesis-GTPase-Der
MDEARERDEARDLEEARVAALRAGLAEYDLDEDDAALLGAELGPDDVVTLPALPVLAIVGRPNVGKSALVNRILGRREAVVEDTPGVTRDRVTYRAEWEGRAFTVVDTGGWEPDARGIDRSVAQQAEIAVDLADAVLFVVDVTVGATSTDEHVVRMLRSSSKPVLLVANKADDARRDLEASSLWSLGLGEPYPVSALHSRGVADLLDAAMKVLPDESAVAKVELGGPRRVALLGRPNVGKSSLLNKAAGEERVVVDELAGTTRDPVDEQIELAGRVWRFVDTAGIRRRVHLQQGADFYATLRTQAALEKAEVAVVLLDVTEVLSEQDVRIVDLVLESGRALVLAFNKWDQLDDDRRRYLEREIEQDLAHVSWAPRVNISARTGRHLEKLVPALETALESWDMRIPTGRLNAFLSELAAANPHPVRGGKQPRILFATQAGTRPPTFVLFTTGFIEAQYRRFITRRLREEFGFEGSPIQVNVRVRERRERR
>NZ_CP027942.1|WP_137756108.1|1921466_1922135_-|(d)CMP-kinase
MGGGLVTTVAIDGPAGSGKSSVARVAAEQLGFHLLDTGAAYRSLAWLVLERGLDPYVEADVLGVLDDFDYAVDTSGPVQRFSVGGVDVTDAIRTERISAAVSGVARVPAVRKAVNVRFRALIAEARPGIVVEGRDITTVVAPDADVRILLTADEDVRIRRRIGDVGDAAGVGERLSARDRSDNQVVDFMTPAPGVTLVDSTHLDFDETVAAVVELVRTQERA
>NZ_CP027942.1|WP_137756109.1|1922116_1923241_-|prephenate-dehydrogenase
MPGAGRSPAVAYPCPVTQRLRGPVRIVGTGLLGSSIGMGLTRLGVEVTLADVSPTAVRLAADYGAGRPAGLGDAPVLVVVAVPPDVTADVVARELDAHRDAVVIDVASVKAPILADLRAAGADVSRYLGTHPMAGRERSGALAGRADLFVGRPWVVADHDAITYARGSVVDDLILDLGAIPIEMDPEEHDRSVATVSHVPQLVSTLMGARLQDAADEALRLAGQGVRDVTRVAGSDPALWVQILSANAPAVAEQLRALRADLDRLVDALDDVDREGARRTLADVLADGRAGVERLPGKHGQRSRFTRIAVRVDDRPGQLARLLTDIGDANVNMEDVRLEHAEGAQFGVAEILIAPETEQRLLEALDARGWAVVS
>NZ_CP027942.1|WP_137756110.1|1923391_1924135_-|rRNA-pseudouridine-synthase
MTGDVQSTEGERLQKVLAAAGVASRRVVEDMIVEGRIEVDGEVVTELGRRITPDARVTVDGTPVQLDVSKRYVMLNKPTGVVSSMADDRGRPDLRTYVAGFDERLYNVGRLDFDTSGLLLLTNDGELANVLAHPSFGVEKTYVAKVRGRVDSRIVRTLRNGFELEDGFIRADRARIVGTPGRQASMLEITLHSGRNRIVRRMLDHVGHPVVDLVRRRFGPLTLGTLASGATRELTKEERGAILKLAR
>NZ_CP027942.1|WP_137756111.1|1924131_1924764_-|SMC-Scp-complex-subunit-ScpB
MTTDAATASDQAQPDASAAAPTEPEAPDRSHLPLVRRLEAILLVADEPQGVVHLASALGAPVAAVREAVASLRADYDGEGDGPERGFELREVGGGWRLYVREAYDPDVEGFVLTQTPTRLSQAALETLAVIAYKQPITRGAIAAIRAVNVDSVVRTLLSRGLVTEAFTDPETGAIHYETTDLLLQQMGLGSIEELPPISPLLPDSDEDDA
>NZ_CP027942.1|WP_137757286.1|1924753_1925521_-|segregation/condensation-protein-A
MHQPHFDGPFDLLLTLIGNRRLDVTEIALGQVTSDFIAYLSTLDGDGMLDEASEFLVVAATLLDLKVASLLPAGEVVDAEDVALLEARDLLFARLLQYRAFKSAAAWFDERLSAESTRHARTVRLEERFRNRAPELRWTLSPDDFAALALLAMTPREVPTVGLAHLHAPLVSIREQAAHVVSVLRGSGTRTFRELVAGAESRGVVVARFLAVLELYRRGALGFEQVEPLGELSISWTGHDFRDDQLSTLGADYDH
>NZ_CP027942.1|WP_137756112.1|1925678_1926566_-|ParA-family-protein
MSGGTEQTAALPGLDAPAMGPTGRPLRAFPVPEPLTGHGPARIIAMCNQKGGVGKTTTTINLGASLAEYGRKVLAVDFDPQGALSAGLGIDNHDATTIYDLLLSSKRDTHEAIQRSSVDGLDVIPANIDLSAAEVHLVSEVAREQILARVLRQVSDEYDLILVDCQPSLGLLTVNALTAAHGVLVPLECEYFALRGVALLKETIDKVQDRLNPALRLDGILATMYDSRTLHSREVLERVVQAFGDTVLESVIRRTVKFPDASVAGRPITQYAPEHSASEAYRQVARELVARGAVA
>NZ_CP027942.1|WP_137756113.1|1926700_1926952_+|DUF3253-domain-containing-protein
MDRDDELERTMLRLVDERAPDRTICPSDVARAVGDADSWRSLMDATRQVAARLADAGEVEVTQRGAVVDVRTARGPVRIRRPR
>NZ_CP027942.1|WP_137756114.1|1927217_1930685_-|TM0106-family-RecB-like-putative-nuclease
MFVRDGLLLHSASDLKAASECEFAMLRALDAKLGRIAKVDDDDDPMLARAGRLGDAHEERILQGYRDRAARDASFRVVEIARPDPMTLDGLRAARAASLAALHDGADVVFQATFLDEATGFMGFADFLVREPATDGAWAYAVYDAKLARSAKTTALLQLAAYALELQRECVAVHDEVHLMLGTGETTTHRLADVLPVFAARIARLREQLGQRLDAAEPIAWDTPGVRQCGRCATCTLEVERTRDVLLVAGLRSTQRERLRTAGITTIDALASSEGRVAGIGDAPLASLRLQARMQLAAPVTGVAYSVFDPIPLGRLPEPSPGDVFFDFEGDPLWWDGGSQWGIDYLFGATTYDTVEEAFTAFWAHDLAQERAALEGFLDWLAERRRRWPDLHVYHYAPYERTHLHAIAARHGVREEEVDDILRADLLVDLYPIVRSAVRISESSYSLKRLEPLFMGDRLRDSAVKDGGASIVAYEEVGRLRGDGDDGAADALLAEIGDYNRYDCAATKGLRDWLAARADELGVPRWRRVEVEGTASARLDAREDAVDARLRARIEGVPADERDDEARATALAAAAVEYHRREDVAYWVMHFERLRSHVDEWRDQRDVLAPTDVAVEVVEGWRMPTRGQLRRRLRLVGPMLAGSRIGPGDAPFAVYPAPAPFGEDDAPAAYRAHSWVSVVSAEEDAGTWTVELEERDPSGAGWSQVPIALTPPRPIPTTKQRAAILEWGERVAGSPDPVVDPMLDVLRRVPPRIAGGMPADGAPAERIVAALAAMDRSYLAVQGPPGSGKTHVGATVLRALVEHGWRIGVVAQSHDVVEHLLRRAIELGVPEDRVGKRPRSGSTSVPGVALQARDIPGFLAGEGGRILGGTSWTFANAEQVPRHALDLLVVDEAGQYSLADTIACSVAANRLLLLGDPQQLPQVSQGHHPEPIDASALGWLSDGHDVLPPGLGVFLAESWRMHPTLCDAVSALSYEGRLRAADVAARRVLAGPAPGVHVVDVAHEGNAVESREEAAAVVAIVREQLGRAWLDPSVADEPRPLTAADVIVVAPYNAQVDLLRRTLDAAGLTETRVGTVDRFQGQEAVIAIVSLTASSADDAPRGIDFVLQRNRINVAISRAQWAAYVVHSPRIADALPYRADGLAQLSGFLRLTGRS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_4

2041491-2041579

Orphan

Consensus_repeat	Method
TGGCCAGTGCTCGCCCTTCGTGGCCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP027942_4

>merge|NZ_CP027942|4|2041491-2041579|CRISPRCasFinder
TGGCCAGTGCTCGCCCTTCGTGGCCAGCGTCCGACCGTCCGTGGCCAGTGCTCGCCCGTTCGTGGCCAGTGCTCGCCGTTCGTGGCCAG

>NZ_CP027942|4|3|2041491-2041579|CRISPRCasFinder
TGGCCAGTGCTCGCCCTTCGTGGCCAG	CGTCCGACCGTCCGTGGCCAGTGCTCGCCCGTTCG
TGGCCAGTGCTCGCCGTTCGTGGCCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137756202.1\|2031949_2032939_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_CP027942.1\|WP_137756209.1\|2040597_2041266_+\|peptidase-M23	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756213.1\|2044750_2045080_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275384
NZ_CP027942.1\|WP_137756216.1\|2049987_2051169_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP027942.1\|WP_137756214.1\|2045124_2047767_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274860
NZ_CP027942.1\|WP_137756217.1\|2051165_2052128_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP027942.1\|WP_137756201.1\|2030963_2031953_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|379234
NZ_CP027942.1\|WP_137756206.1\|2036655_2037801_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
NZ_CP027942.1\|WP_137756203.1\|2032929_2033403_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756211.1\|2042277_2043597_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|235685
NZ_CP027942.1\|WP_137756215.1\|2047846_2049991_-\|transglutaminase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376628
NZ_CP027942.1\|WP_137756205.1\|2034285_2035287_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP027942.1\|WP_137756218.1\|2052137_2057867_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375409
NZ_CP027942.1\|WP_137756208.1\|2039181_2040510_-\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|100084
NZ_CP027942.1\|WP_137756210.1\|2041712_2042219_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224678
NZ_CP027942.1\|WP_137756219.1\|2057863_2059222_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP027942.1\|WP_137756212.1\|2043596_2044721_+\|N-methyl-L-tryptophan-oxidase	unknown	unknown	gnl\|CDD\|236887
NZ_CP027942.1\|WP_137756207.1\|2038212_2039094_+\|DUF559-domain-containing-protein	unknown	unknown	gnl\|CDD\|380141
NZ_CP027942.1\|WP_137757294.1\|2035283_2036645_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP027942.1\|WP_137756204.1\|2033389_2034277_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756202.1\|2031949_2032939_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.16445e-10
NZ_CP027942.1\|WP_137756213.1\|2044750_2045080_-\|hypothetical-protein	gnl\|CDD\|275384	sd00037, PASTA, PASTA domain. PASTA domain is found at the C-termini of several penicillin-binding proteins (PBPs) and bacterial serine/threonine kinases. It is a small globular domain consisting of 3 beta-sheets and an alpha-helix. The name PASTA is derived from PBP and Serine/Threonine kinase Associated domain.	0.00288552
NZ_CP027942.1\|WP_137756216.1\|2049987_2051169_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	3.31937e-24
NZ_CP027942.1\|WP_137756214.1\|2045124_2047767_-\|hypothetical-protein	gnl\|CDD\|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	3.20981e-56
NZ_CP027942.1\|WP_137756217.1\|2051165_2052128_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	4.2399e-98
NZ_CP027942.1\|WP_137756201.1\|2030963_2031953_-\|VWA-domain-containing-protein	gnl\|CDD\|379234	pfam13519, VWA_2, von Willebrand factor type A domain.	6.50134e-12
NZ_CP027942.1\|WP_137756206.1\|2036655_2037801_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NZ_CP027942.1\|WP_137756207.1\|2038212_2039094_+\|DUF559-domain-containing-protein	gnl\|CDD\|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	2.88019e-06
NZ_CP027942.1\|WP_137756215.1\|2047846_2049991_-\|transglutaminase-domain-containing-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	1.0881e-07
NZ_CP027942.1\|WP_137756205.1\|2034285_2035287_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.70722e-85
NZ_CP027942.1\|WP_137756218.1\|2052137_2057867_-\|hypothetical-protein	gnl\|CDD\|375409	pfam17892, Cadherin_5, Cadherin-like domain.	4.0289e-07
NZ_CP027942.1\|WP_137756211.1\|2042277_2043597_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|235685	PRK06058, PRK06058, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP027942.1\|WP_137756210.1\|2041712_2042219_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|224678	COG1764, osmC, Organic hydroperoxide reductase [Secondary metabolites biosynthesis, transport and catabolism].	8.7698e-15
NZ_CP027942.1\|WP_137756219.1\|2057863_2059222_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.51112e-62
NZ_CP027942.1\|WP_137756204.1\|2033389_2034277_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.76752e-26
NZ_CP027942.1\|WP_137756208.1\|2039181_2040510_-\|PDZ-domain-containing-protein	gnl\|CDD\|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	8.7799e-46
NZ_CP027942.1\|WP_137757294.1\|2035283_2036645_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.00846e-20
NZ_CP027942.1\|WP_137756212.1\|2043596_2044721_+\|N-methyl-L-tryptophan-oxidase	gnl\|CDD\|236887	PRK11259, solA, N-methyl-L-tryptophan oxidase.	1.42625e-85

>NZ_CP027942.1|WP_137756209.1|2040597_2041266_+|peptidase-M23
MPTASRARSRASARGRGSGARRRPASRSAAARARLAAQERRRVGIATGIVAAATVAIAVLAWVLQPRIEPWEQTATVSGAVPSSVAGWDREQLTNAAIILQAGSDLGLSDRDRTIAVMAAMGESSLTVVDFGDQAGPDSRGLFQQRTGWGPYEVRMDAYGSAVLFYQALDDVAERDGMPPTLVAHTVQVNQDPYHYEPYWDDAVAVVAALDAAPIDVVVEPA
>NZ_CP027942.1|WP_137756208.1|2039181_2040510_-|PDZ-domain-containing-protein
MDSVLLYILGVVILVIGLAVSIALHEVGHLVPAKRFGVRVGQYMIGFGPTLFSRRRGETEYGVKAIPLGGYISMAGMFPPRRAGEAGRTASTGFFDTLVQDARDVSAETVEEAGEERTFYRLPVWKRIVIMLGGPFMNLVLAFVLYAIVLCGFGVAQPGTTIASLSECVIPASQERSDCTASDPAAPAVAAGIEPGDVIVAIDGRPVDSWADVQAGIRDDAGQQLTFTVERDGADVDLQVTPIATERYVTDADGEVVEVDGQPQVETVGFIGIGPQYEIVQQPITEVPVAVADNVARVAQVIVTLPVRLVEVAQAAFGGGERDPEGPISVVGVGRIAGEIASLDQVPIAERASSMLGILASLNVALFVFNLVPLMPLDGGHVLGAVLEAIRRGFARMRGRPDPGPIDTARWVPVTLAVTVVLGLMSALLIYADIINPISILP
>NZ_CP027942.1|WP_137756207.1|2038212_2039094_+|DUF559-domain-containing-protein
MHEPFSVRSGYDRGLTRGSMRGPAFSTPVRGTRIAASLAIDHGVLVTALLELARTDQFLSHVTAAAIHGIPLPARLRGGRIHVSSPSGVNRMRRPEVVGHRVKAEVVEVDGVPVECPLDTVIHLATMLSVPELVVAIDWLLHPANRMSVSKAALVERLEHFRGARGLGRLRAAIALARVGAESPRESELRLLLVRHGLPEPHLNLDVRDDAGVFVARVDMAWPDLRIAVEYDGEQHRVDARQFARDIDRLADLERVGWIVVRVTKEHLRRPMSDVLPRVREAFARRGVVIPAV
>NZ_CP027942.1|WP_137756206.1|2036655_2037801_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MAAINLGTPEVRTLAPRRRTRQIRVGSVLVGGDAPVSVQSMTTTRTTDVDGTLQQIAELTATGCDIVRVAVPTQEDADVLHVIAAKSQIPVIADIHFQPRYVFAAIDAGCAAVRVNPGNIRRFDDQVGEIARRAAAAGVSLRIGVNAGSLEPSLLAKHGRATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVTMVQAYRLLAQAGDWPLHLGVTEAGPAFQGTIKSATAFGILLAEGIGDTIRVSLSAPPAEEVKVGLQILQSLGLRERRLEIVSCPSCGRAQVDVYTLADEVTEGLKDVTVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVVRTVPESEIVATLIEEARRIAAEQPDLPSGSPTVVAS
>NZ_CP027942.1|WP_137757294.1|2035283_2036645_-|MFS-transporter
MRVLQHPAQRRTLVVLSIGQALGGVGNGVALGVGSLLVEQVTGDPAFAGLAATLLTLGGAILAVPLARLAARRGRRAALTTGALVGLTGTSTIVVGGTIDAWPIALAGFLLLGAAAAVNLQSRFAATDLSVRSHRGRDLSLVVWMTTIGVVVGPQLVPPGDALGLALGLPHLVGAYVIVGVMQALTALALAVGLRPDPLLAAQAMRGDEPGAASATTPAHARLVDHPRALLAIVVVASAHATMVGIMALTPVHLEHAGHSLAGIAITMSAHTAGMYALSPVFGILADRVGRLQTVLLGQALLVGSIVVNVVLSDDLAPLSLALLGLGWSAATIAGSTLVSEASPDRVRPRIQGRSDLVQGLTGAAAGAVAGPILGLAGYAGLSLAMAAFVVVGCVAAIAAARPARADAPDARADADAPDAPPRSAAVQAPPSGTLRDGTTVDDAPRRPLEDHP
>NZ_CP027942.1|WP_137756205.1|2034285_2035287_-|MoxR-family-ATPase
MNAVPGRAPITKDELARGGQVIRAVQQSFASKVVGQADLLQSLLVAVLANGHVLMESVPGLAKTTAAATLARAVDATFHRIQCTPDLLPSDIVGTQIYDQHEGTFRTQLGPVHANFVLLDEINRSSAKTQSAMLEAMQERQTSIGGESHPLPRPFLVLATQNPIEQEGTYTLPEAQLDRFLLKEILTYPSPTEEAEIVRRIESGVFETDASPVASVQDVQFLQELTKRVYVDQAITNYVVQLMYVTRHAKDYIGAQLAGYIEYGASPRGSIAFTQATRALALVRGRDYVIPEDVKTLRHSILRHRIILGYEAEADGVTSEQIVDAIFDAVRTP
>NZ_CP027942.1|WP_137756204.1|2033389_2034277_-|DUF58-domain-containing-protein
MQRRLQKVKTKMAIHAHRRTFELLDGNYQSIHHGRSHDFDDLREYAPGDEVKDIDWKATARSTTPLVKRYIASRQHNVVVVVDTGRNMAATAESGESKEDVAIQTIGILSYLAIKHGDRVAMYAGNAEHTGFTPEGGSEAHLERMLRMLDEQISLDAPDSDLQHVLEQVARSVRRRALVVIVADDLAYTRELDQVLGRLHVRHEVLWISIGDADLMARDARAPAIFGVAHDAPLPDYVRRDKALMRAFDEGIERRRRTLQQELLSLGIAAERIPSSDEVIPALFRLLERHRRVRR
>NZ_CP027942.1|WP_137756203.1|2032929_2033403_-|hypothetical-protein
MSAVDAPDLYGPFQYHPWWVLGVLLVVALGMAYYVVWLATRPRGILVPPPPPPRKVDVRSLKQKYLAMIDEVAEEHEAGELDARRLSQRLSLVLRFFAHESTGVVAEVMTLEDLAEADLPAVHGAVAQYYPSSFRRTAKHDPEGAIDLARKVVSTWM
>NZ_CP027942.1|WP_137756202.1|2031949_2032939_-|VWA-domain-containing-protein
MDVGLLLWWWMLPLLLVVGGAVGVLAIVRRRRAERGKPVAHMDRLTALPRYRAAFARYRAWTALGLVLLVLAGIGTAFVAARPAAVNANQNDDYKRDILLCLDVSGSMVDVDAEILGVFQQIATGLDGERIGMRIFDASSVMAFPLTSDYDYIIEQLGRYQRALEGSLGPDEQFNYAAGTSNGNGASLVGDGLASCALDFASTDDTDRPRSIILATDNMVNGQQIFSLEQAGQLAIDNDVRVYAINPFDFGGDPVSAQLQNVAETTGGAYFALDFADTVSSIVERVNAIEAGYIETPPEVQIVDRPGPLLPILMMLVVGICIVAWRVRL
>NZ_CP027942.1|WP_137756201.1|2030963_2031953_-|VWA-domain-containing-protein
MTFLPDIPVGVLAIVGLVLVALCAWRLVAERGRRIHWIRRTLMALVVIAMVARPGVPGGEVPTGSINVNVFLVIDTSQSIAAEDWGQGQPRIQGIRDDVRDVAYAFAGSNISVITFDSEPELRVPLTDDGSAVIELVNALRPEIGFFSQGSSISAARDMLQQEIERADASHPGAPTIVFYMGDGEQTAEAPPQSFDTVAPLVDAGFVLGYGTEQGGRMQESSFETPQQPVYVQDPAGGDAISRIDEGALEEIASQLGISYLHRSADVDLAPSLESMTSQQGEVDLSQYEEARLDLYWVLAVPLFLLLAWELWVFASALRLRSGATRRRS
>NZ_CP027942.1|WP_137756210.1|2041712_2042219_-|OsmC-family-peroxiredoxin
MRHEYRVGVEWTGAGDVGTEGYRSYARDHVVRVASLPDILGSADPTFRGDRTRHNPEQLLVAALAQCHMLSYLHQAVTRGIVVTAYEDEALGVMTTQGTGGAFDRVLLRPRVTVRDADMAAVALEAHVQASKDCFIASSVAFPVDHAPSIWHDGMLVAGEAPGADARA
>NZ_CP027942.1|WP_137756211.1|2042277_2043597_+|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MTDVLAPQSRSVTTPIPGPRSQELLARKAKVVPQGVPHQLPVFIASAHDAIITDVDGNRFIDLGCGIGVTTVGHTNDQVVAAVQEQVARLTHSLFGTTPYESYVRVAELLAELTPGDFEKRSFFVNSGSEAVENGVKIARRYTRRRAVAVLEHGYHGRTNLTMTMNFKPAPYATGMGPLASDIFHAPGSYPLRDGLDGAAAAKRTIWYLEKHVGVEDLACLVVEPIQGEGGFIVPADGYLPAMQEWCTANGVVMIADEVQSGVCRTGRTFASEHFGWVPDLVLSAKGIAGGMPLAGVTGRAEIMDAVHTGGIGGTFGGNPVSCAAAVAVLEQIESADLNGKAQRIESVLRPLLEGLQAKHDVIAEVRGRGAMLAIELVDPATGDPVPSAPISKAAGEQGVLVLTAGTDYNVLRFLPSLAITDAQLEDAIAVIDEAFSAL
>NZ_CP027942.1|WP_137756212.1|2043596_2044721_+|N-methyl-L-tryptophan-oxidase
MRVAVVGLGAWGSMTAWRLAAAGADVVGFEAHAIGHDRGSSHGATRLYRRLCVEHAGLVPLAERSAALWRDLEERAGERLLTVTGGVSVGPADSVLVRDSLAVATAAGVSHEVLDATRVRERWPMLRVADDAVGVVDPAAGILAAEPSVLAAAAAARAAGATLREGTRVDARDAAEGVLHVAGRRERFDQVVIAAGAWTGELVPGLGVTPTRTLVTWFAPRRGHEQELSAQRLGVVVAAVGDAWMWGHGALPGGLVKLGPADDPAFVPIRPDDLVGSVDARDGALVSRLAAAALPGVDSTPAHVRPCMYGRTADHQFVVGRVGPRLLVAGGCNGHGFKHAAAIGEHLAELALGEVPTVPMPFADPRRVASVVDA
>NZ_CP027942.1|WP_137756213.1|2044750_2045080_-|hypothetical-protein
MPHRAAPKVVVPDVVGLPFHVGRDVATDARVALANPDPDGPPIASIAWPGAFVIVRQHPAAGALVHEWDSVAIEVQRDDAGADPTPARSPAAPRPTAPLIADAREDADG
>NZ_CP027942.1|WP_137756214.1|2045124_2047767_-|hypothetical-protein
MSDRLQLPSPPAEPAPASFPLLASLAPVVGAAALWLVTQTTTVLLFALLGPIIAIASLGDGRLQRRRSRRREAERFARECDVLGERIDAARDEEARALASAHPDARACGSAPVNHPHRWRHEPGEPVPVSLGVGAVPSTLELDGYAQPQEEDVDRRARALRARAAEVEGPLVVDARLGVGVVAARGVGDAHVRSMAVQVLAQLAPDRVSLVVEADASWAWIDALPHHVDRRVVDDRTLVRILGDDVEVTLASAADAAALPRDCRVVAQAALDAVRVGDRRCTPSLLAAREAAAAATRLAEAAVEAGLGGARALPSLVPLADLAQDAPGVLPATFLVGDRPFAIDLAVDGPHAVVGGTTGSGKSELLIAWIAALARRHDPDALAVLLVDFKGGASFAALRDLRHCVGLVTDLDEQGATRAIESLRAEMRHRERALHEQGARSIDEATGLGRLVIVVDELAAMLHDQPELLRLFTDVAARGRSLGMHLILCTQRPAEAVRDGVLANCGVRISLRVPDEADAVAVTGVPDAARLRLDERGRCVVRIAGQSTVHAQSALADPALLERLVADSRAHAAPRRPWCDPLPDRLPVTELPATDEPGAVVLGLVDRPAQQRIDAVRWRPAVDGPLLALGAAASGKSALVDLLGAAGATVVRDEESLWDVVHERIEPGMLAIDDVDALLARMDDEHAHEVSALLARRMREGAGVGHGVALTARRTTSAMGQLASLADTRLLLRLASRQEHLLAGGASDRYDPAMPPGGAWLDGERVQLALAATPAVARRPLRVAVPDGPVAIVAAAPADVPRGLGATGTPQAPSDVTIGLVGEWEAAWGSLDRLRVDRPVVVLGAEDRAVRQVLRGAPLSPVLRGERRWMLADGLAHRLA
>NZ_CP027942.1|WP_137756215.1|2047846_2049991_-|transglutaminase-domain-containing-protein
MTQWRLAALTASVLAILAACLPMGALFGSTRIVPVVATALLAGTGIAVLGWWRRWPALWLILVGLGTLAIVAPPLVAPELLAGILPTPEAYAVVVPAIWQSWRDILTIQTPVGVGGGVLMAPLLLVLGGSAISGSIVLRAHRAELAAIVPVAIAIWTILFGPARPWAPVLHAVLVTGLVVVLVSIVRQARRRRAAPRTLSTLWRRSIASLTVAAAAIGCGIVGGAAVLGDRTVLRSDPVMLDTSQLDSPLSAFRASHEPPRRDETVLVATGLAPGDRLSVAVLDAYDGVVAGVGDAAFVRQPAIPPSGDEVLGVTVQALDGPWIPHVGTPESVGFVGARAPALQATLHADADTGDLLATAGIQPGDAYEIAFHRDAAVDDLSTLTPAGRPRLGVTPPADAVSWLSGWTQDATTPGERLAALVDGLAADGYLSHGVDDDAPSRAGHSLARIAELFDGVMVGDGEQYAVAAALLAEQLGFPARIVVGYVPGSIVDGQPTTVVAGDLDAWIEVSTQESGWVAIPVTPEERPIPEEEATAPQPSTQPQAPAGPVLPEGGIEGDQQPADPVQPPAQAVDDGLLLAVLGVVATALGGVLLVASPALAVLGAKLLRRRRRRIAPTAAARVDGAWREFVDAAVDRGRSRQTAATRLEYARGAQEAAFARAVDATLFGRTDPDDASVDEAWSHRQRLVDALDEGRPWHRRLRARLSLRSLVHR
>NZ_CP027942.1|WP_137756216.1|2049987_2051169_-|DUF58-domain-containing-protein
MIELLRRSTRVVTGWGWTLVGVAIVGGPVGVALGWVELVVAASGALLLVLAALPWVLGQRDVDVQLALSAERVPVGQPAHATLVVRRPGRFFAPRAIDVLVGDVVYRLDLPRLDTGEDSTQRIVLDTRRRGRVVVGPATVLRTDPFGILERTHVLTAASELVVHPRVARIPSVAAGLVRDLEGETSAELTADDVAFHSLRDYHPGDEPRHVHWRSTARTGQLLVRQFEPSKRSDTLVCVSTSAEDYGADDFELALEVVATIASAAIAQRRSVRVVESPSSGRLDPATVDARTRDRLLDALTDLATDRRLGIVDVVRSIALAPQASVAWIVVGGTAAPRRLREATGLLPPDVAPIVLRADALAPPSVGRLGRVPVLTVGLLEDLPRGLRSEALA
>NZ_CP027942.1|WP_137756217.1|2051165_2052128_-|MoxR-family-ATPase
MTDDVTAIRELGDRMAEAIEPVLVGKAHVVRLALTAMLSGGHLLVEDNPGTGKTSLARALAACIDGSASRIQFTPDLLPGDITGVSIWDQSTGRFRFHEGPVFANVVLADEINRASPKTQSAMLEVMQEGRVTVDGRPHAVPAPFMVVATQNPIEQSGTYRLPEAQLDRFALRTSIGYPDHASTLRILEGSAEPVDPASLAPVVDTARLRELAGVVATVHVDAAVADYVARIVDATRQSGEVRLGVSVRGALSLVRTARAYAALDGRDYVTPDDVKALVIPVLAHRIVLEPEAELDGITQETILQQLMLSTPPPRGRDRS
>NZ_CP027942.1|WP_137756218.1|2052137_2057867_-|hypothetical-protein
MSRATRIGGIALGGVLAVSVATAAALWPGNAALDPRLDASSVWVANAAADLVGVVNTQTDQLESIVAPGGAASEVVQGSEGVLVVDRAASVMRALDPATLERGPAVLLPAGSDVQVAGDAVSIVAPSSGDVWVTDVAAVQSGEELGDPVVQLGRGAVAALTSSTLFAASPGLGRVLEIDVATGETLASSDAPMSPEEPSLQITAVGERWVLLDTTSNVLSSRGWETRLQAESAVLQLPGPASGRVLVATDTGIEARELGVETVDVVASGLDGAPSRPLVHDGCVFGAWASGAVWRGCGADEALLELDGVEAGAQLALVARGDAVVLADAGSGDAWTVARDGALVDDWSLPAPPAVAPGGEEPEDPGAGADDPEQLPPTANDDALGARPGRVTLLPVLENDVDPNGDVLTVVAVDGDPNATIAPDGRSIRLALPADASGQVVLAYRISDGAGGEDTATATVEVRAPEQDEPPVAQRSVQLEIAPGEAVVANAFDHWIDPDGDALVLVDASSDAGDVVRFRGDGRIEIVDGGAGTVRDLAIAVSDGTTIVRGTIGLVPVEQPPLVAGTVTATTRLGQTTILEPLLSARGGDALSLHNVNGPAGVVQASYVDDTIAVTPDAVGTTAFTYVVSDGVETATGQVRVQVLPAVDPATPPQPAPHAVGVLSGGAVEVPVADLDVDPAGGVLVVTGASVDSDAVRVDVVDQERVRIELGGPLGGPATVRYGLSNGASTAEGTIEVVERDAAMQAPIARDDAVRVQPGGAVDVPVLANDEHPDGAAVELVPDLLEPAASGLAFVDGDRLRYVAADEPGEVSVTYEIRGPDGQSAFATVRIVVADSDAATNVAPSPPTVDARVVAGETVDIPIDLTTADPNGDGVALVGLATPASLGSATIVDGGTLRYEAGGYSAGTETLAYVVADDLGAQAQGIVRIGVAPPDGAVAPPIAEPDMVALRPGTAQTVDVLANDLDPAGLALDVVSALPQGDVEAEVVDGEVLVTAGEEPGEYGVVVTIESSRGAQAVGWLRVVVDEDAEPPAPRAQDVRVPVAAILDREQVVVDPMDAVTVADGAIDELVTTLPLDVAGTRIDADGTIRVAVAPQTRVVPYTVTREDTGESASALVVVPGTEDALPQLRPDAPPIVVASGETIEIDVDDYVVAVDGDPVLITDASSVRAEHSDGAQPVVDSRTLRFTSAPGYFGFASIAFEVTDGESPGDPDGRVASIVLPITVEPGEGLPGRVLGTTLQLEQGGTRELDLARITTAPDPEAVAGFSWSLGDVPPGFSATIDGSLLTVRTAGAQVGTTGELEVAVTGPDGDGIPGTLRLVTISSTRPLAQPQPDRIEVVRGGAASVDLLANDEATNPFPGTPLVLAAVDQSTVPLGVALRRAAGSSVLSVETSELARVGTTTVRYQVLDATGDPRRAVWSTLTIVVHDVPDRPAPPQQAADQHIDAGLVVRITPPGDGNSPILGYTLLGPNGYRHECGPSTTCTLTDLPVGVDVRLQVVARNAVGASEPSSPSEPMHADRLPAPVTGVSSTPTSTAGTTIVRWQAATVPQGATGVTGYLVRVREAGILLRLDAAAREVALSGLQPGRAYEVEVAATNDAGVADDAWRWSTPHPFTAVGPPGQTSVVLSGFDEASSTASVVWAAPASGGADLRYRLQAVAAGAPTPSCSSTGGGTPAGQSGTSGTVRLPSGGRSQIVVVADNGWFCSVSVSAPVLPSAPDAGDLRIALDDGTEQAPRDALDMLVTAVTPDQGTTMEVRVQGPNVQGAWTPVAAGDRLVPAGLVYGREYVVDIRQCSPGQTLVACSQPQRVGAYTPLSLAAVLSLPLECRWNEPLRGAAPPTNANATNRVVATFTMADGSEVERTGDANQPIVVPAGAASVQVVGQVTSGLLDTVTGRNPLPSPAAACSM
>NZ_CP027942.1|WP_137756219.1|2057863_2059222_-|serine/threonine-protein-kinase
MAARLPSTPPVLPGFTHVHILGKGGFADVFLYEQNLPRRPVAVKVMHADLVDDRVRSAFRSEVNLMGRLSAHPSILTVYSASVAGDGRPYLVMELCSTEIGDRFRERPLELDDALEIMVRVGGALETAHRAGTLHRDVKPANILTTAFGHPVLSDFGIAANMHVGDHETAGVSVPWSAPEVLRDETAGTVASEVWSFGATLYSLVAGRSPAEVRGGRNGTDELSARILAHDIQPFDVDAPRTLLRVVQKALAKDPADRYHAILPMVEDLQAVQEEMGVPITPIDLQERAWAREVDAADDADREEELPLRVRAARRRAPMRGAQQIDISSSTQAVAPPRRKGLVSLAVGAATAAVLGAVAVVAVAVTTIQGAIPVVEEVVAEPVDGGVAFSWEDPGLVDADSYLVTTASGDAVIQRATSFRLSGSSGEELCITVAVNRDGRSGDGAEACGEVP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_5

2136050-2136280

Orphan

Consensus_repeat	Method
CGGATGCGGTCCGCTCACGTTTCGCAGGCGATCCGGATGGGTCGAGGGA	PILER-CR

2 spacers

csa3

The CRISPR arrays of NZ_CP027942_5

>merge|NZ_CP027942|5|2136050-2136280|PILER-CR
CGGATGCGGTCCGCTCACGGTTCGCAGGCGATCAGGATGGGTCGAGGGAAGCTACCCCTCCGCCACCCCGAATCGCCTGCGAAACGCTCTCCACGCGCGCGTCCCCACCACGTTTCGCAGGCGATTCGGCGTCATGAGGGAACATCGCCCTCGTGAGGCGAGATCGCCTGCGAAACGCGAAACGGATGCGGTCCGCTCACGTATCGCAGGCGATCCGCGTTGGTCGAGGGA

>NZ_CP027942|5|2|2136050-2136280|PILER-CR
CGGATGCGGTCCGCTCACGGTTCGCAGGCGATCAGGATGGGTCGAGGGA	AGCTACCCCTCCGCCACCCCGAATCGCCTGCGAAACGCTCTCCACGCGCGCGTCCCCAC
CACGTTTCGCAGGCGATTCGGCGTCATGAGGGAACATCGCCCTCGTGAG	GCGAGATCGCCTGCGAAACGCGAAACGGATGCGGTCCGCTCACGTATCGCAGG
CGATCCGCGTTGGTCGAGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137756285.1\|2129743_2131168_-\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_CP027942.1\|WP_137756299.1\|2143448_2144465_-\|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|163554
NZ_CP027942.1\|WP_137756290.1\|2135311_2135962_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP027942.1\|WP_137756293.1\|2137744_2138527_-\|type-1-glutamine-amidotransferase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|153223
NZ_CP027942.1\|WP_137756289.1\|2134058_2135315_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP027942.1\|WP_137756297.1\|2141782_2142592_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213260
NZ_CP027942.1\|WP_137756295.1\|2139869_2141015_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378117
NZ_CP027942.1\|WP_137756287.1\|2132284_2133199_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213235
NZ_CP027942.1\|WP_137756282.1\|2128559_2129015_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756298.1\|2142588_2143452_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP027942.1\|WP_137756300.1\|2144474_2145911_-\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
NZ_CP027942.1\|WP_137756286.1\|2131721_2132120_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756294.1\|2138451_2139798_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235687
NZ_CP027942.1\|WP_137756281.1\|2127995_2128511_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379324
NZ_CP027942.1\|WP_137756291.1\|2136486_2137071_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP027942.1\|WP_137756296.1\|2141024_2141786_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP027942.1\|WP_137756288.1\|2133195_2134047_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|372253
NZ_CP027942.1\|WP_137756283.1\|2129011_2129401_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NZ_CP027942.1\|WP_137756292.1\|2137073_2137748_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP027942.1\|WP_137756284.1\|2129397_2129697_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756285.1\|2129743_2131168_-\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	5.54018e-115
NZ_CP027942.1\|WP_137756299.1\|2143448_2144465_-\|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|163554	TIGR03842, F420_CPS_4043, F420-dependent oxidoreductase, CPS_4043 family. This model represents a family of putative F420-dependent oxidoreductases, fairly closely related to 5,10-methylenetetrahydromethanopterin reductase (mer, TIGR03555), both within the bacterial luciferase-like monoxygenase (LLM) family. A fairly deep split (to about 40 % sequence identity) in the present family separates a strictly Actinobacterial clade from an alpha/beta/gamma-proteobacterial clade, in which the member is often the only apparent F420-dependent LLM family member. The specific function, and whether Actinobacterial and Proteobacterial clades differ in function, are unknown. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP027942.1\|WP_137756290.1\|2135311_2135962_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.54728e-69
NZ_CP027942.1\|WP_137756293.1\|2137744_2138527_-\|type-1-glutamine-amidotransferase-like-domain-containing-protein	gnl\|CDD\|153223	cd03129, GAT1_Peptidase_E_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus peptidase E is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.	7.66779e-20
NZ_CP027942.1\|WP_137756289.1\|2134058_2135315_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.21424e-33
NZ_CP027942.1\|WP_137756297.1\|2141782_2142592_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	7.20641e-111
NZ_CP027942.1\|WP_137756295.1\|2139869_2141015_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	7.78497e-34
NZ_CP027942.1\|WP_137756287.1\|2132284_2133199_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	4.70457e-90
NZ_CP027942.1\|WP_137756300.1\|2144474_2145911_-\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
NZ_CP027942.1\|WP_137756298.1\|2142588_2143452_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.43178e-29
NZ_CP027942.1\|WP_137756294.1\|2138451_2139798_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235687	PRK06062, PRK06062, hypothetical protein; Provisional.	0
NZ_CP027942.1\|WP_137756281.1\|2127995_2128511_-\|ATP-binding-protein	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	2.19738e-13
NZ_CP027942.1\|WP_137756291.1\|2136486_2137071_-\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.24009e-50
NZ_CP027942.1\|WP_137756296.1\|2141024_2141786_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	8.25934e-43
NZ_CP027942.1\|WP_137756288.1\|2133195_2134047_+\|ABC-transporter-permease-subunit	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	0.000274949
NZ_CP027942.1\|WP_137756283.1\|2129011_2129401_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.68633e-45
NZ_CP027942.1\|WP_137756292.1\|2137073_2137748_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	1.83533e-121
NZ_CP027942.1\|WP_137756284.1\|2129397_2129697_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	4.6214e-11

>NZ_CP027942.1|WP_137756290.1|2135311_2135962_+|response-regulator-transcription-factor
MTIRIALVDDQELVRLGFRMVLEAEDDVEVVGEAGDGAAGAALAARGDVDVVLMDVRMPGVDGIAATERITARPEHPKVLVLTTFDLDEYAYAALRAGASGFLLKDARPAELIAAIRAVHAGDAALAPTVTRRMLEHFASAAPASADASVLDVLTPREREFLVAIAEGLTNDELARRFVLSESTVKTHVGRLLRKLDARDRVQLVILAYDLGLVGR
>NZ_CP027942.1|WP_137756289.1|2134058_2135315_+|two-component-sensor-histidine-kinase
MTSVTGTPDVSVGGAVALPRPPGVLRRFTARHPRLVDWTLAIGTQLPVLAIGIVIAAVDLTQRIDGLLMVAAAVVAGGALLWRRRWPLAVVLVISALLALPTHVVVGAFVAVYVALYSLGAYGRTLHVWLGVAGAAVASLVSTLVVPAIETMDVGPVVSINLVGIASFVVAVLLGTSVRARRAYVAALIARADDMARDRDRQAQLAVAAERARIAREMHDVVSHGLTVMVTLAEGSAAQVARDPERAGATMRRVADAGRDSLAEMRRLLGVLREPGDGAELAPQPAAGDLQALVASFRDVGMPVRLTTSGPAIADSALALTVHRIVQEALTNAMRHASDAGRVEVDVRHGAGVVRVEIVDDGSGAPASTTGAGRGIVGMRERAALFAGDVAAGPREPSGWRVVATLHESPSPVQERPA
>NZ_CP027942.1|WP_137756288.1|2133195_2134047_+|ABC-transporter-permease-subunit
MTTAATTDAADARRATYRETSHRVTFGGAVRAEWIKLTSVRSIGWAIAIAVVITAGLGALVTFATLATAPEGAIEQGLFQEIPLASLGASGLLVSQLVFAVLGVIAMTGEYGSGQIRSSLTAVPARTPVLAAKALVLGLIAFVASAVALTIGMLATVGIALAFGVEASTIDIDASVPFAVLAGAVYLALLTVFSLAIGTLVRSGAGAIAIALGVLLVLPTIVGLIPLEWVQDASPYLLPNAGMTMSMPGADPGEDFWRALAVTIAWPAVALVGAAAALVRRDA
>NZ_CP027942.1|WP_137756287.1|2132284_2133199_+|ATP-binding-cassette-domain-containing-protein
MIVAEHLTKRYGAKVAVDDVGFEVRPGLVTGFLGPNGAGKSTTMRMIVGLDRPDAGSVTVSGVPYRELRSPLTEVGALLDAKAWHPGRTAERHLLGLAATHGIGRDRVREVLELTGLESVARKRVGGFSLGMGQRLGIAAALLGDPHTLILDEPVNGLDPEGVAWVRRLLRGLASEGRAVLLSSHLMSEMAQVADRVVVLGKGRVLADQSIEEMLGAQGSRQVVLVRGSGVDRLAHLLAGDDVTTTQVAPDAVEVSGVPAPRIAEVAVGAGIGIEELAPRKATLEERYMALTSDAVEYRTEGIR
>NZ_CP027942.1|WP_137756286.1|2131721_2132120_-|hypothetical-protein
MATYDEWRTARIEAEAKAAAAADAAGAQATVTPIGDGLWLVSVAGVSRGTVRRIVVQGRQRFEARLRHIDPGHGTRIGEYFELAKAVAALRAEVPRFVGRDPFKELTNYVSREQMRQRTERMRQQRRSGRYS
>NZ_CP027942.1|WP_137756285.1|2129743_2131168_-|amidase
MTALHELTAIDLWDALHRRRVSAREVAEHYLGRIARDTTNAFVTVTADAALARADALDAADDRTPVMFGLPFADKDLVQRAGVRTQFGSRAREGFVPSVSDPIVEVLDAAGGVSLGKTATPEFGFSGHTSSALTGHTTLPGRPDLGAGGSSGGAAAAVAAGLLPFAPGSDGGGSIRIPASICGLVGLKPSRGRVPAHSGLGQIGGLSVSGPIARTVRDAALLMEAMLGRVNGVVPHRTTLRSPEPDGGSLLAAATRGEGRFRIAVLEGTPWDDAVDVTISQDARDAVAVAVRELDAAGHGIDELAMPALPGYADTFATLWRYGAAGIPFTAEERERVEPLTRWLADAGRTLTPGEVAQAVALFTAYERTVLTAFAPFDAVLTPTTALPARPLDWYGDDPEESFRQQVRHTPHTSFVNVSGLPAITLPVHETADGLPMGAHLIGRPGEEATLLAIGRQLERRIPWEHVGRRRFAP
>NZ_CP027942.1|WP_137756284.1|2129397_2129697_-|winged-helix-turn-helix-transcriptional-regulator
MPDVYRALDDETRRTVLDLLAERDEQTLFELCGALAMRHGVTMTRQAISQHLAVLEEAGLVRAERRGRTKVHSFDPAPLAAIVERWRIPHPTRAERTDP
>NZ_CP027942.1|WP_137756283.1|2129011_2129401_-|VOC-family-protein
MRIRLTSVFVDDQDAARTFYTETLGFAVKHDVPLGDDAWLTLVEPGDVDGIELLLEPSSHPAVAPYRDALREDGIPSLVLHVDDLAAEHARLAAAGVVFTQPPVDAGTVHVAVFDDTCGNLVQLLQPKG
>NZ_CP027942.1|WP_137756282.1|2128559_2129015_+|hypothetical-protein
MGLRSIGLATGRVAHAAMQPVQRVLWSRAVAVPGYHLATQAALAWGRLLGGDVRREGDLRVVSGLPEWAFGRGGTTVGATFLTRSNVSTDVLAHEEVHRQQWLRYGLAFIPMYYAAGIDAHANRFEIEAGLERGGYLPRRATRPRRRPTAS
>NZ_CP027942.1|WP_137756281.1|2127995_2128511_-|ATP-binding-protein
MLVVLAGLPGTGKTTIAAALAAEVGATLASVDDAEAAMLAAGIDAAQPTGLAAYVVVEQLARRQLVAGRDVVVDAVNDAPEARDQWRALAATTGVELRWVEVRLADEAEHRRRLAERTRDLPGGFPEPSWASVVARRAALEAWDEPRIVVDARQDAVASVAAIRDALRHAD
>NZ_CP027942.1|WP_137756291.1|2136486_2137071_-|N-acetyltransferase
MLPEEYEPRRVLPRHLRTVRAEPEFSYVIRPATVRDIPSVRAIHAHYVLNSSVTLEDRPKTLQEWRRTFDGLERLRLPFLVAESGTRTILGYALAEPWKPRSAYRTIVEHSIFLAPASTGRGLGKALLVALIDAATLAGCKEMIAVIADEKAEASVALHERLAFRETGRMGKVGFKFDRWLGTITMTRRLKRRR
>NZ_CP027942.1|WP_137756292.1|2137073_2137748_-|uracil-DNA-glycosylase
MTRPLAELVDRGWAEALAPVEPTIRELGERLRQEVAEGRPYVPEGPRVLRAFERPLADVRVLVVGQDPYPTPGHAVGLSFSVDPAVRPVPRSLQNIYRELEADLGIPAPVHGDLSRWADQGVLLLNRVLTTRAGTSDAHRGWGWEAVTDAAISALARSPQPLVAVLWGAKAGALAPLLASTPIVASPHPSPLSASRGFFGSRPFSRVNELLQQQGAAPIDWRLE
>NZ_CP027942.1|WP_137756293.1|2137744_2138527_-|type-1-glutamine-amidotransferase-like-domain-containing-protein
MRRDRGRGAPGARDLRRGARRGRRVSVHLIGGGWAEDESAWTGRFVEEARERAGGTPTIVVVLWAETVAEGEGWHDEYRADLAKHGCELRFVQLAADRVLAADDLLGGDAIFVGGGLTPGYHAAVMPAAQAIRELVADGTPYAGFSAGAMIAGDVALLGGWRIGGVEVTQQPSSEGLDEVTLEEGLGLVDVVVDVHAAQYGNLGRAVAIVDAELAERTVAIDERTSLVAGAQALVAAGEGNVYVCTKDGPHVQVAVLGGR
>NZ_CP027942.1|WP_137756294.1|2138451_2139798_-|aspartate-aminotransferase-family-protein
MTDTVLNDAMPSGHEADPSAGDRARALDAHVFHSWSVQGQTNPFAIAGGLGTRVWDHEGREYLDFSSQLVNTNIGHQHPKVVAAIRAQAEVLTTVAPATTNLVRGEAAAAILSHAPGFQSVFFTNGGADAIENAIRMARLHTGRDKVVSLYRSYHGNTGAAVVATGDWRRVPNEFARGHVHAFGPFLYRSEFWSETLEQECKRALHHMRRVIEAEGPESVAAILVEAIPGTAGVIVPPPGYLAGLRELADRFGAMLIMDEVMAGFGRTGQWFAHDAHDVRPDLIAFAKGVNSGYVPVGGVVVSPEIHDTFTRRVFPGGLTYSGHPLAAASIVATLDAMESEGIVDHAHRIGEDVLGPGLAALAERHRMIGEVRGVGVFWALDLVADPETREPVGADVIGALKGALLRRGLLPFAADNRIHVVPPCVVTEDEARQALAIYDEALAEVAA
>NZ_CP027942.1|WP_137756295.1|2139869_2141015_-|ABC-transporter-substrate-binding-protein
MHRTSTRAFAVLAAASAAALVLGACSSGGDDAPEEGADGLTPVTLQLQWFAQGQFAGYYAAIDQGFYEDHGLDVTIQEGGADIVPQTVLADGQADFAIAWVPKALASIEAGAGITNVGQIFQRSGTLQVSFADAGIEDPADLAGRNVGSWGFGNEFELFAGMGEAGLDPMTDATLVQQAFDMSGLLSGDIDAAQAMSYNEYAQLLETVDPDTGELYTADDFTVIDWNEVGVAMLQDAIWANTEALQDEAFQETTVAFLEASLEGWIYARDNPEEAAQIVVDAGSQLGASHQLWMVNEVNALIWPSPGGIGMLDQDAWDQTVEISLSTPNQDGSTVITTDPPDTAYDTTYVEQAIANLEDEGVDVTGADYEPIEVTLNEGGQ
>NZ_CP027942.1|WP_137756296.1|2141024_2141786_-|ABC-transporter-permease-subunit
MSAAARVLAPIALGVVLLVVWEAAVALLDIPPYLLPAPSAIGAQVAIILPGLVQAGLATGTNALVGLVGGAILAIAMAALASRIRWLQSIVEPLVAAIAVVPIVALAPVLGTMFGAASETPRQVVVAIAAFVPIFVNTLRGLRRSDPVHRDLLRANGASGWQVTWHLTLPGALPYVFTGLNVASSLAVISAVVAEYFGGLQNGLGSRIASAAAQSGYARAWSYVLAAVVLGLIFYCATLLLERSRARATSTVR
>NZ_CP027942.1|WP_137756297.1|2141782_2142592_-|ABC-transporter-ATP-binding-protein
MTAVEVRGATKVFATRRGEVRALDTVDLTVADGEFVSLIGPSGCGKSTLLRLVADLDEPTAGEVSVFGRSARAARLDHAYGIAFQQAGLLPWRTVRQNVELPLQLHGVAAAARRARSTELLELVGLGEFADRHPDQLSGGMQQRVAIARSLAEHPRLLLMDEPFGALDEMTRERLQGELRRIVAETEAAVVFVTHSIPEAVYLSDRVVVMSPRPGRITDVIAIERRRMDAAEDIREADAFFASVTAVREALHGPEAAPDGTAARGVETR
>NZ_CP027942.1|WP_137756298.1|2142588_2143452_-|ABC-transporter-permease-subunit
MTRARPLVRSVLLGLVGVLALAALWEAYKALGPAEGWRIGDVSVLPRTTDLAMPHVWDMAARAFAPVRGGSDELVVQAVLAACLTTAATALAGLLVGAVVGVGLALVMQALPIAQAAMLPWLILSQTVPLIALAPIVVSWGGRIDGWERWMSVAVIASYLAFFPVAVGTLRGLQSPTAAQVDLLRSQGASWWSTIRYLRMPSAVPYALSALRLGAAAAIVGAVVAEVSTGSRGGIGRLIVEYAQAGSSDPARGWSPIFGAVLMGLAVAGLVSLAGLALARYRRLEAA
>NZ_CP027942.1|WP_137756299.1|2143448_2144465_-|TIGR03842-family-LLM-class-F420-dependent-oxidoreductase
MDFGAVFQTNPPSARVVQLSQLAEAHGFTHVWTFDSHLLWQEPYVLHSAILGATRKVTVGPFVTNPATRDWTVTASVFATLNEMYGNRTVCGIGRGDSAVRVTNGAPTTLATLREAVHVIRELGSSRSVEHNGATLRFPWSKGSQLEVWVAAYGPKALQLAGEVADGFILQLADVDIARWMIQAVRDAAANVGRDPDDMTICVAAPAFVGDDVADQRDQSRWFGGMVGNHVADIVARYGDSGAVPQALTDYIAGRTGYDYNSHGRAENDHVDFVPDEIVDRFCILGTVDDHIAKLRALADLGVDQFAAYVMHDDKEETLRLYGERIIPALSEHVVAKS
>NZ_CP027942.1|WP_137756300.1|2144474_2145911_-|dihydropyrimidinase
MTTTLITGGTVVSSTGRAAADVLIDGEIIRAVLEPGSVLLGHDLAASVDRVIDATGRYVIPGGIDAHTHMQLPFGGTFASDTFETGTRAAAWGGTTTIVDFAVQRTGERVQDGLAAWHELAAGECAVDYGFHQIVGGVDDDSLAAMRGLVDEGISSFKLFMAYPGVFYSDDAQILKAMQVAADTGLMTMMHAENGPAIDVIAEQLVAEGKTAPYFHGIARAWQMEEEATHRAIMLANYTGAPLYVVHVSAKQAVQQLAMARDAGQQVFGETCPQYLYLSLEEQLGATSGEWGEFEGAKWVCSTPLRSREEGHQDHMWQALRTNDIQMVSTDHCPFCMKDQKTLGLTDFRAIPNGIGSIEHRMDLMYQGVVTGRITLERWVELTSTTPARMFGMHGRKGVIQPGADADVVIYDPNGHTSIGVEKTHHMAMDHSAWEGYEIDGHVDTVLSRGKVIVDEGAYLGSKGDGRFVKRGLSQYLA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_6

2469859-2469981

Orphan

Consensus_repeat	Method
CACTGCACGAAACGCACCTCGGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP027942_6

>merge|NZ_CP027942|6|2469859-2469981|CRISPRCasFinder
CGCAGCAGCAGGCGCACCTCGGAACGATTGCGGCGTCGGGAACCGCACCTCACTGCACGAAACGCACCTCGGAGCGACCACATCGGCCGCAAGCGCACCGCACTGCACGAAGCGCACCTCGGA

>NZ_CP027942|6|4|2469859-2469981|CRISPRCasFinder
CGCAGCAGCAGGCGCACCTCGGA	ACGATTGCGGCGTCGGGAACCGCACCT
CACTGCACGAAACGCACCTCGGA	GCGACCACATCGGCCGCAAGCGCACCG
CACTGCACGAAGCGCACCTCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137756577.1\|2474075_2475005_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213186
NZ_CP027942.1\|WP_137756576.1\|2473099_2474083_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP027942.1\|WP_137756580.1\|2478158_2479082_-\|EamA-family-transporter-RarD	unknown	unknown	gnl\|CDD\|225510
NZ_CP027942.1\|WP_137756583.1\|2480855_2481914_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370676
NZ_CP027942.1\|WP_137756581.1\|2479167_2479464_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP027942.1\|WP_137756572.1\|2467074_2467734_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP027942.1\|WP_137756566.1\|2459014_2459449_-\|DUF3817-domain-containing-protein	unknown	unknown	gnl\|CDD\|378962
NZ_CP027942.1\|WP_137756578.1\|2475001_2475841_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP027942.1\|WP_137756579.1\|2476744_2477995_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380569
NZ_CP027942.1\|WP_137756567.1\|2459494_2460283_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119401
NZ_CP027942.1\|WP_137756571.1\|2465740_2466856_-\|GuaB3-family-IMP-dehydrogenase-related-protein	unknown	unknown	gnl\|CDD\|236322
NZ_CP027942.1\|WP_137756568.1\|2460279_2462373_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377447
NZ_CP027942.1\|WP_137756574.1\|2470040_2471543_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|376340
NZ_CP027942.1\|WP_137756569.1\|2462369_2463872_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340816
NZ_CP027942.1\|WP_137756582.1\|2479611_2480790_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|380115
NZ_CP027942.1\|WP_137756573.1\|2468798_2469725_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137757323.1\|2467730_2468570_-\|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl\|CDD\|372574
NZ_CP027942.1\|WP_137756570.1\|2463886_2465680_-\|glycerol-3-phosphate-dehydrogenase/oxidase	unknown	unknown	gnl\|CDD\|223651
NZ_CP027942.1\|WP_137756565.1\|2457434_2459006_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP027942.1\|WP_137756575.1\|2471627_2473100_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756577.1\|2474075_2475005_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	8.01295e-101
NZ_CP027942.1\|WP_137756580.1\|2478158_2479082_-\|EamA-family-transporter-RarD	gnl\|CDD\|225510	COG2962, RarD, Predicted permeases [General function prediction only].	4.78669e-74
NZ_CP027942.1\|WP_137756583.1\|2480855_2481914_-\|hypothetical-protein	gnl\|CDD\|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	1.37923e-07
NZ_CP027942.1\|WP_137756581.1\|2479167_2479464_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	2.1982e-49
NZ_CP027942.1\|WP_137756572.1\|2467074_2467734_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	4.23002e-23
NZ_CP027942.1\|WP_137756566.1\|2459014_2459449_-\|DUF3817-domain-containing-protein	gnl\|CDD\|378962	pfam12823, DUF3817, Domain of unknown function (DUF3817). This domain is of unknown function. It is sometimes found adjacent to pfam07690 and pfam03176 which are both transporter domains.	2.39766e-20
NZ_CP027942.1\|WP_137756578.1\|2475001_2475841_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.32981e-100
NZ_CP027942.1\|WP_137756579.1\|2476744_2477995_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380569	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	1.71999e-81
NZ_CP027942.1\|WP_137756567.1\|2459494_2460283_-\|hypothetical-protein	gnl\|CDD\|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	2.05277e-13
NZ_CP027942.1\|WP_137756571.1\|2465740_2466856_-\|GuaB3-family-IMP-dehydrogenase-related-protein	gnl\|CDD\|236322	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein.	0
NZ_CP027942.1\|WP_137756568.1\|2460279_2462373_-\|hypothetical-protein	gnl\|CDD\|377447	pfam05045, RgpF, Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.	6.09581e-94
NZ_CP027942.1\|WP_137756574.1\|2470040_2471543_-\|IMP-dehydrogenase	gnl\|CDD\|376340	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain. This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.	0
NZ_CP027942.1\|WP_137756569.1\|2462369_2463872_-\|hypothetical-protein	gnl\|CDD\|340816	cd01635, Glycosyltransferase_GTB-type, glycosyltransferase family 1 and related proteins with GTB topology. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00690475
NZ_CP027942.1\|WP_137756582.1\|2479611_2480790_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	2.14622e-18
NZ_CP027942.1\|WP_137756576.1\|2473099_2474083_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.18395e-65
NZ_CP027942.1\|WP_137757323.1\|2467730_2468570_-\|DUF4097-family-beta-strand-repeat-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	1.58906e-07
NZ_CP027942.1\|WP_137756570.1\|2463886_2465680_-\|glycerol-3-phosphate-dehydrogenase/oxidase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	6.98068e-164
NZ_CP027942.1\|WP_137756565.1\|2457434_2459006_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP027942.1\|WP_137756575.1\|2471627_2473100_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.09907e-73

>NZ_CP027942.1|WP_137756573.1|2468798_2469725_-|hypothetical-protein
MPDPLDIVQTSQVHALGLVPSRSRGLARVRRGAYVDAAALAAADPEQRYRARVKAVGLARPGIVLALESALMLHGLPFGSEPSHVFSTGDPAMSGGRAGVRNSHLPIRPEHVVEVEGLRCSSVAWTLADIGRRRIPSAAVASVDAALAAGTVDVDDILGALAYQSRQGGARARWSVAFADGRSESVGESRSRVAIALLGFPAPELQVEVRTDLGSFRADFGWRLDDRWLLGEFDGLVKYGALASASGRTGVDALVAEKRREDAIRRVADLCRWTWDDVVRPERLARILRAAGLRRRDPVLPAGVRLLP
>NZ_CP027942.1|WP_137757323.1|2467730_2468570_-|DUF4097-family-beta-strand-repeat-protein
METNEQGTFEGSTPADSSLERWTVRPGETRTITLEGVRRLKVGVIAGSVDVVGHDEPWARVEVHRVDGRDLEVSLDDGALTVAHPLLRWSNLIESLKSLGTERGRVEVSILVPRHVSLTYGQVTAQGLVAGLSAGADVSTVSGDVQLDGVTGTVQVNTVSGDVEATGLDGDVQVHALSGDVTMSGRSRRVGVDTVSGDVLLDVLGPVDAVSVNGVSGDATVRVDEDVALEVVTNTVSGSGRVLGTALPKRGGRHSEPGTGPAARITLNSVSGDHAVVRR
>NZ_CP027942.1|WP_137756572.1|2467074_2467734_-|helix-turn-helix-transcriptional-regulator
MSPVFAHGALRLYLLALLAESPMHGYEVMQALERRFGGTYQPSAGTIYPRLSRLEEEGLVAKHADGRRTRYEITDAGRAHLADRQGELDALESEIGDSVRRLADEVRGGVRDAMRTLRADLAAAEREARSSRTAAPSPSPSNDAEPEPASSTTHGRSEPRGEDRAELRAAVHEVDLAATRLRAEVRTLVRGASVTAATAREVLAEVDATAARIRAIVGR
>NZ_CP027942.1|WP_137756571.1|2465740_2466856_-|GuaB3-family-IMP-dehydrogenase-related-protein
MAEIELGLAKSARPAYGFDDVAVVPTRRTRDSDVVSLAWQIDAFRFEMPVLGAPTDSVMSPRTAIALGRAGGLGVLNLEGVWTRYDDPEPLLAEIAGLPADLATSRMREIYAEPVRPELIRQRLSEVRDAGVTVAGSLSPQAVQEHYQTVIEAGVDLFVIRGSTVSAEHVTKSGEALNLKQFIYELDVPVIVGGVVTYTAALHLMRTGAAGVLVGFGGGAASTSRSVLGIHAPMATAVSDVAAARRDYLDESGGRYVQVIADGSLGTSGDIVKAFACGADAAMLGTALARATDAPGRGWHWGPEAHNQKLPRGNRVQVEQVGDLEVVLNGPAPVADGTANIVGAVRKALATTGYKDVKEFQRIDVVVAPRR
>NZ_CP027942.1|WP_137756570.1|2463886_2465680_-|glycerol-3-phosphate-dehydrogenase/oxidase
MAGKQQTAPSKSVRRSANLGPEERAKALASMREREVDVLVIGGGIVGVGSALDAVTRGLRVGLVEARDFASGTSSRSSKLIHGGIRYLEQLNFGLVREALIERGLLLQRIAPHLVKPVRFLYPLTNQLERGYIGAGMALYDAFSYTGFMRPGVPLHRHLTKKQMLKEIPSLDPNALVGGLTYYDAQVDDARYVAELARTASFYGAHVASRVRAEGFLKVGERVVGIQAHDYETGERFEIRAKQVVNATGVWTGDTQAMVGERGDFRVRASKGVHLVVPRDRFHSSMGLLLRTEKSVLFVIPWGRHWIIGTTDTDWELDKAHPAATAADIDYILEHVNSVLATKLTRADVEGVYAGLRPLLAAAEGGSTANLSREHHVSHTVPGLVMIAGGKWTTYRVMAKDAIDEAVSAIDGKVPPSCTEDIPLLGAVGYRAAWNKRGKIAKAFGLHKHRVEHLLNRYGVMTDDLLDIIRERPELAEPLPGADDYLGAEVRYACLAEGALHLDDVLARRTRISIEAWDRGVAAAPVAARIMAEALGWDEERIEKEINTYNKRVAAELASQELPDDESADRARTEAPEIVPLGALPVAEPVGTRAQAG
>NZ_CP027942.1|WP_137756569.1|2462369_2463872_-|hypothetical-protein
MPHALIGTNHLRSYAGSEMVVLELVEHLIGRGWRVDVYTNELGSPMVDELTSLPHEGRLRLVEASPSERFDDDYDLVWMQHGVLPPAFLERLEEGVDAPIVWHHLSRFQDVEMPILADVESRVTALSAGMCGRVLEVLGEFGVADDRMLLVDNPAPDAFADHPREPRTGPLERVLVVSNHPPDEVRDAVALLEARGIVVGRLGVHDEPKRVTPDVLEQYDAVVTIGKTVQYALSMGIPAYVYDHFGGVGWLDDTTLEPELHWAFSGQKTQRRIDAETLARELVEGFPVARAFAERHRTRHAERWRLSTRIDALLADERLRPAPPASKADVRRLASFGRLYGDLYRLMRSRDHAAREAERELALVRESHASAAEARDRRETEVLVIGQRLTAARADMHRAIERAEAAERARERAERRLARQQRLEEQRLALVELLLSRPWMVTGAARHLVGWITRRYPIRLQDVRAADPAALRRMHDEVLESRFYRLGRVAGDDADAGRRR
>NZ_CP027942.1|WP_137756568.1|2460279_2462373_-|hypothetical-protein
MILGPDARRLGIYFLYDAEGVVDDATFLMLEAIHAHCHELIVVVNGFLDDAGRDRLETLPRTTVLQRANEGFDVWAYRTALRAKGWDELERFDEVVLCNFTILGPVHPLSEMFDEMAARDDDFWGLTTHNGATFDPFSTHSELGYLPVHLQSHFIAVRRSLATSPEFRDYWEHMVPIHSYADAVGKHEVVFTKRFAELGFRWTAYVDTSDTIGQQYYPLFNDPVRLLQEHRSPVFKRKSFFAGPAAYVDETSHDVARRLYDHLRDGTSYDHRALLRHLLRTCDVADLHATLALHEVVEPREPDRARRLRAYVSCAGMDAVRAVRAARAAGVDDVVVLCEHGCRGACDEASRVLLDGGDPLRTSLRDIREHPIDAACVLLGPSSGLSFPFSAAESTARQAIDDVLASREHVEGILRLLETDDTGLLVAAPPVHATWFGALGDGWRGSHDRIRAALAAIGRAVPTNERRDPISLASGALWLLPDAAEGLETLGVSAEDARTALPSIVASNGLLTRHVTTPQHASVALVTSLDYLRRLGSQVGSGGEERFSALLHRVRQMAEAGQPGHHARTIVAFSIAWDVGGSRVDAEHVAFVTDGAGTSRITLVPPPGAVSAHLDPVDGARVLCDVPRIRSRGALELRIDGAVEAGDDLLLDEDASLRVVGALVPGESFTIEFDRLRLDEEGPAILDALVDQRGSRP
>NZ_CP027942.1|WP_137756567.1|2459494_2460283_-|hypothetical-protein
MTATASSFLDVARRPRWIGALLAALAVAAIFAALGQWQIGRAVEQGQADERDTETPVALASVAEPQEPLLSVAGGRIVEAEAAIDPASFLTIVGRDQDGVSGAWLTARAITDAGDSLAVAIGWAPTRGEAEAAAADVDLGPRMLVGRYMPSESPTVTDFEGDTTEAMSVGDLINRWPGFEGDVYAGYVILDEAPTDLAPIVSLPPQQQTQLNWLNVFYAIEWVAFAIFAFYLWFRLVQDAREREREAAEDAAAATADEPSTT
>NZ_CP027942.1|WP_137756566.1|2459014_2459449_-|DUF3817-domain-containing-protein
MGCVPRPVQQIPQIRSALAFYRVMAYVTGVLLLLVVVEMVAKYGFLMEIEAFGRSGVLGLVPDGTTTGVNLSRVVLIVHGWVYVVYLISNFRLFLLLRWPFLRLLAMAAGGVVPLLSFFVERRIHRIAEAELAALEQQAAAPSQ
>NZ_CP027942.1|WP_137756565.1|2457434_2459006_-|glutamine-hydrolyzing-GMP-synthase
MADTSQRPVLVVDFGAQYAQLIARRVREADVYSEIVPSSITAEEVRAKDPAAIVLSGGPSSVYAEGAPRLDPEILDLGIPTLGICYGFQVMAAQLGGRVARTGNREYGSTAVTVGAAGSLLAEQPDAQTVWMSHGDAVAEAPEGFEVLASSVDTPVAAFEHRERRLAGVQWHPEVRHSEHGQRVIEAFLHDIAGLPGDWASDNIIEEQVQRIREQVGTDRVICGLSGGVDSAVAAALVHEAVGDQLVCIFVDHGLLRQDEREQVEQDYVASTGVRLVTVDAREQFLSALAGVTDPETKRKIIGREFIRAFEQAERDLVAEAAADGAPIRWLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDLQFQLIEPLRALFKDEVRAIGRELGLPEVIVGRQPFPGPGLGIRIIGEVTEERLDTLRRADAIARAELTAAGLDGEIWQCPVVLLADVRSVGVQGDGRTYGHPVVLRPVSSEDAMTADWTRLPYDVLARISNRITNEVEEVNRVVLDVTSKPPGTIEWE
>NZ_CP027942.1|WP_137756574.1|2470040_2471543_-|IMP-dehydrogenase
MDTRDPFGFTGLTYDDVMLLPGRTDVIPSEADTSTWLSRRIRLAVPLVSSAMDTVTEERMAIAMARQGGIGIVHRNLAIAEQAAIVDRVKRSESGMITDPVTIGPDATVAEVDAICGQYKVSGLPVVDEGGHLLGIITNRDMRFVARADAASTLVRDVMTPAPLTTAPVGTSREDVLEIFRASKLEKLPLVHEDGRLAGLITIKDFDKVEQYPFATKDEHGRLRVGAAIGFFGDAYDRAEALLEAGVDVIVVDTANGESQGVIDIVTRLKGDARFDGVDIIGGNVATREGAQALVDAGVDAVKVGVGPGSICTTRVVSGVGVPQVTAVYEASLAATPAGVPVIADGGLQYSGDIAKALVAGASSVMLGSLLAGTDESPGDLVLINGKQFKTYRGMGSLGAMQTRGKKTSYSRDRYFQADVPSDEQLIAEGIEGQVPYRGPLATVAYQLTGGLRQSMFYVGGRTIGELQTKGRFVRITAAGLKESHPHDIQMVVEAPNYRR
>NZ_CP027942.1|WP_137756575.1|2471627_2473100_+|branched-chain-amino-acid-ABC-transporter-permease
MVTPPCNGHRAHRIPTRRASRTTGGHVETTLRRTRWWFPLIALLVAVGAAIGLGAAPADATSTPAPTDPSQTYQFQGIVRSDPQTPLAGVVITATGDGFEGTATTGADGRWSIAVPGPGAYTVTIDEATIPSGLQVNPEHVSREFTIGTTNSQGVLFQIGEPGSFDGAGSGGDDGEGTSSGSGSGSSSGESSSSRFSWSQLGQRLFTGLNFGLLLALGAIGITLIFGTTGVNNFAHGEMLTFGALVFYMLTTALHLPVWLSVLGVLVASAAFGWLHDAAIFRPLRRRRVGLVQVLIVTIGLSIALRYFFQFLFGGGSETLAVDNSAVISFGTFNVRVSNIVSMVVSVIILLAVAFFLTRTRIGKATRAVSDNSGLAAASGINVDRVIRIVWVLAGTLTGLSGVLYAYFVGASVRWDMGFIILLLLFASVTLGGLGSAFGALVGAVIIGLATELSTLWLPTDLRFAVALVILILVLLLRPQGVLGRKERIG
>NZ_CP027942.1|WP_137756576.1|2473099_2474083_+|branched-chain-amino-acid-ABC-transporter-permease
MLDVLLGSLGELISASSAAYALAAIGLGIHFGYAGLLNFGQAGFMAIGAYSFAIFTSMANPTENWGWPPALSLLAATLVGIACATVFALILGIPTLRLRGDYLAIVTIASAEIVRFTVRTQDLTDVTGGSQGIRGTDYKGDIQAVNDGLLDLSNNTWYTLVSWIIVILAILLVWGLMRSPWGRVIKGIREDEDAVRSLGKNVYAYKMQALVLGGVIGAIAGILFIFPRAVQPDSFATTLTFNVWTALLLGGAATVLGPVLGGVLFWFLLSFVRGLIGELHDLGLFGAMSATQAGQLAFVAVGVALIALVVFRPQGIMGNKKELSFNV
>NZ_CP027942.1|WP_137756577.1|2474075_2475005_+|ABC-transporter-ATP-binding-protein
MSSATKTHPLVDGEVGPGCAKVDPIVVADGVRRQFGGLTAVDVEHVEIPRGAITALIGPNGAGKTTFFNLLTGFDKPNEGSWSFDGQSLAGVPAYKVARRGMVRTFQLTKSLGRLTVLQNMLLGATGQRGERLGSALWAFLWRKQEQENIVRADDLLARFKLDAKREDFAASLSGGQRKLLEMARALMSKPNLVMLDEPMAGVNPALTQSLLDHVLGLKADGMSVLFVEHDMHMVRHISDWVIVMAEGKVVAEGPPESIMQDQAVVDAYLGAHHDTDLGTLTNQEIQQIEQEAAEELDEVQAAREEDKA
>NZ_CP027942.1|WP_137756578.1|2475001_2475841_+|ABC-transporter-ATP-binding-protein
MTAVLETKDLVAGYLPGVNILNGCSIVANEGDLIGIIGPNGAGKSTLLKAIFGQVNVRGGSIVLNGEEITGLKADRLVGKGVGMVPQNNNVFPSLTIEENLEMGLFQQPRMFKERFEFVAGLFPELAKRRRQRAGSLSGGERQMVAMGRALMMDPSVLLLDEPSAGLSPVRQDETFLRVAEINKHGVTIVMVEQNARRCLQIAHRAYVLDQGRDAYTGSGREMLNDPKVVELYLGTLATDVEEKAKTSTNAIVVDSGASAEPGGADEIAASSEPRDESK
>NZ_CP027942.1|WP_137756579.1|2476744_2477995_-|ABC-transporter-substrate-binding-protein
MKASLHQRSRRAALLAASTAGIVVLAACSTGGGAGGESDAPSDDPFIVGTILPQTGNLAFLGPPEFAGVDLAVADLEAADFPFDIEQIDTDSGDTTTDIAIQSAGQLVDAGASVVIGAASSGVSFTFIDQFVDAGIVQISPANTSPDFSTYDDDGYYWRTAPSDVLQGRVLGNLMVNDGAANVAFLYINDPYGIGLADNAGAAVEAGGGSVVASVSYNPGDTNFSSQVSEILAASPDAIGILAFEETANIIPELVSTQGYAASQVYFVDGNLSNSYEFPEGTLEGAKGTLPGNPADDTFQDRLLEIDDSLTDFSYAPESYDAVILAALAAAQGGSTDPETIRDNMQSVSEGGTKCTDVAECLQLIADGEDIDYDGVSGPIEFDDNGDPTEAYIGIYQYGADNRYTLLTTEFGSLNE
>NZ_CP027942.1|WP_137756580.1|2478158_2479082_-|EamA-family-transporter-RarD
MRTTESGRGLALAVGAYAVWGVVPAYVVLMQGVAAIELVGWRVLASVVVAALIVTAVRGWGALCAVLRDRRSLLALGASGLAILVNWTVFAYAVLSGHIIETSLGYFLNPILSIVLAVVVLHERLRPAQWVAVGISVVAVVVLVVAYRSFPWIAILLALAFSVYGLLKKQVGARVDAITGFTLETAATVPFAIGMLVVSTIVAGPTILDVPPLVQLAVVGFGVVTAVPLMLFSAAARRVSLTTLGFTQYLAPILSLLFGWLVMGEPMPPERLIGFGLVWLSLAVLMVDLVVAEGRRRRSPAVPAPAP
>NZ_CP027942.1|WP_137756581.1|2479167_2479464_-|co-chaperone-GroES
MSVSIKPLEDRIVIRQVEAETTTASGLVIPDTAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAEGDRVIYSKYGGTEVKFGGEEFLVLSARDVLAVVVR
>NZ_CP027942.1|WP_137756582.1|2479611_2480790_+|methyltransferase-domain-containing-protein
MDAAALRLLLSRDGLALLDEVSATLDDLGGAVQAVQSLRRRGHDPALVAAVLTQARLRRRGAAKFGPFAASMLFTEAGLEQATRLRVAAVHAGRMRDAGVASVADLGCGIGGDAMAIAATGCTVRAVDADEVTAAVAGFNLAPLPEATVVHGRAEDADLRDVDAIWADPARRDATGRRLPVEAWSPSLPWLLSLADERPMGVKLGPAIDHEHLPADGEAQWVTVDGETVEAVAWTGSLARPGVRTSAIVLDDAGAHELAGSPDEDAVDVRALGAWLHEPAGAVIRARLIGAVAAEIDAGLVSERIAYLTTDADVVSPFTQRFRVVATMPLDERAIQRELRARGIGTLEVKKRGADVDPDRLRRRLRLAGDGAATLLATRVDGRHRAILAERA
>NZ_CP027942.1|WP_137756583.1|2480855_2481914_-|hypothetical-protein
MSDQFPQQGDERRFAPSESTEQSASASSAGQEAQQPEQSGSWGQPATQQPQATGDQQAQPWGQPAAEQPAAPSYDQSSEQSATPSYGQSEQTPSYGQSEQSATSYGQSSDQSATSYGQSSDQSATPSYGQSEQTPSYGQSSAAYGQSSQSEQQAPAWGQAQSSDQQQSWGQPAQQSDQSWGQPSQQQPSYGQSTPSYGQPSSAPAYGQQQYGQQSTPSYGQQSSSAPAYAQQQPGYGQQQYGQQAGYGQYGQQQYGAQPAKAPRGKLTGITITAIVLTGVGLLLTILFAPIAGLPLIGGIVTGVMSMRRAPQNKPWGLIATIGSGVLLVVAIIITIVYAVIWLPWFASGGSF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_7

2481147-2481299

Orphan

Consensus_repeat	Method
GCCGTACTGCTGCTGGCCGTA	CRT

3 spacers

The CRISPR arrays of NZ_CP027942_7

>merge|NZ_CP027942|7|2481147-2481299|CRT
GCCGTACTGCTGCTGGCCGTACTGGCCGTAGCCGGCCTGCTGGCCGTACTGCTGCTGGCCGTAGCCCGGCTGCTGCTGCGCGTAGGCGGGCGCCGACGACGACTGCTGGCCGTACGACGGGGTCGACTGCTGGCCGTACTGCTGCTGGCCGTA

>NZ_CP027942|7|1|2481147-2481299|CRT
GCCGTACTGCTGCTGGCCGTA	CTGGCCGTAGCCGGCCTGCTG
GCCGTACTGCTGCTGGCCGTA	GCCCGGCTGCTGCTGCGCGTAGGCGGGCGC
CGACGACGACTGCTGGCCGTA	CGACGGGGTCGACTGCTG
GCCGTACTGCTGCTGGCCGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137757324.1\|2482438_2484067_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP027942.1\|WP_137756580.1\|2478158_2479082_-\|EamA-family-transporter-RarD	unknown	unknown	gnl\|CDD\|225510
NZ_CP027942.1\|WP_137756588.1\|2486716_2488564_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP027942.1\|WP_137756591.1\|2490604_2491144_+\|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|378696
NZ_CP027942.1\|WP_137756587.1\|2486354_2486720_-\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NZ_CP027942.1\|WP_137756584.1\|2481987_2482386_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367272
NZ_CP027942.1\|WP_137756586.1\|2485386_2486355_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|234600
NZ_CP027942.1\|WP_137756579.1\|2476744_2477995_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380569
NZ_CP027942.1\|WP_137756582.1\|2479611_2480790_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|380115
NZ_CP027942.1\|WP_137756589.1\|2488620_2489550_+\|type-I-pantothenate-kinase	unknown	unknown	gnl\|CDD\|235466
NZ_CP027942.1\|WP_137757325.1\|2484478_2484931_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|376771
NZ_CP027942.1\|WP_137756573.1\|2468798_2469725_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756575.1\|2471627_2473100_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
NZ_CP027942.1\|WP_137756574.1\|2470040_2471543_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|376340
NZ_CP027942.1\|WP_137756577.1\|2474075_2475005_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213186
NZ_CP027942.1\|WP_137756576.1\|2473099_2474083_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP027942.1\|WP_137756585.1\|2483918_2484482_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NZ_CP027942.1\|WP_137756590.1\|2489513_2490530_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP027942.1\|WP_137756578.1\|2475001_2475841_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP027942.1\|WP_137756581.1\|2479167_2479464_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756580.1\|2478158_2479082_-\|EamA-family-transporter-RarD	gnl\|CDD\|225510	COG2962, RarD, Predicted permeases [General function prediction only].	4.78669e-74
NZ_CP027942.1\|WP_137756588.1\|2486716_2488564_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP027942.1\|WP_137756591.1\|2490604_2491144_+\|CGNR-zinc-finger-domain-containing-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	1.79748e-11
NZ_CP027942.1\|WP_137756587.1\|2486354_2486720_-\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	3.1536e-43
NZ_CP027942.1\|WP_137756584.1\|2481987_2482386_-\|hypothetical-protein	gnl\|CDD\|367272	pfam02956, TT_ORF1, TT viral orf 1. TT virus (TTV), isolated initially from a Japanese patient with hepatitis of unknown aetiology, has since been found to infect both healthy and diseased individuals and numerous prevalence studies have raised questions about its role in unexplained hepatitis. ORF1 is a large 750 residue protein. The N-terminal half of this protein corresponds to the capsid protein.	5.8532e-05
NZ_CP027942.1\|WP_137756586.1\|2485386_2486355_-\|alanine-racemase	gnl\|CDD\|234600	PRK00053, alr, alanine racemase; Reviewed.	1.32471e-73
NZ_CP027942.1\|WP_137756579.1\|2476744_2477995_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380569	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	1.71999e-81
NZ_CP027942.1\|WP_137756582.1\|2479611_2480790_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	2.14622e-18
NZ_CP027942.1\|WP_137756589.1\|2488620_2489550_+\|type-I-pantothenate-kinase	gnl\|CDD\|235466	PRK05439, PRK05439, pantothenate kinase; Provisional.	0
NZ_CP027942.1\|WP_137757325.1\|2484478_2484931_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	2.03979e-39
NZ_CP027942.1\|WP_137757324.1\|2482438_2484067_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	5.63406e-167
NZ_CP027942.1\|WP_137756575.1\|2471627_2473100_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.09907e-73
NZ_CP027942.1\|WP_137756574.1\|2470040_2471543_-\|IMP-dehydrogenase	gnl\|CDD\|376340	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain. This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.	0
NZ_CP027942.1\|WP_137756577.1\|2474075_2475005_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	8.01295e-101
NZ_CP027942.1\|WP_137756576.1\|2473099_2474083_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.18395e-65
NZ_CP027942.1\|WP_137756585.1\|2483918_2484482_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	1.27524e-28
NZ_CP027942.1\|WP_137756590.1\|2489513_2490530_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	7.51432e-14
NZ_CP027942.1\|WP_137756578.1\|2475001_2475841_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.32981e-100
NZ_CP027942.1\|WP_137756581.1\|2479167_2479464_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	2.1982e-49

>NZ_CP027942.1|WP_137756582.1|2479611_2480790_+|methyltransferase-domain-containing-protein
MDAAALRLLLSRDGLALLDEVSATLDDLGGAVQAVQSLRRRGHDPALVAAVLTQARLRRRGAAKFGPFAASMLFTEAGLEQATRLRVAAVHAGRMRDAGVASVADLGCGIGGDAMAIAATGCTVRAVDADEVTAAVAGFNLAPLPEATVVHGRAEDADLRDVDAIWADPARRDATGRRLPVEAWSPSLPWLLSLADERPMGVKLGPAIDHEHLPADGEAQWVTVDGETVEAVAWTGSLARPGVRTSAIVLDDAGAHELAGSPDEDAVDVRALGAWLHEPAGAVIRARLIGAVAAEIDAGLVSERIAYLTTDADVVSPFTQRFRVVATMPLDERAIQRELRARGIGTLEVKKRGADVDPDRLRRRLRLAGDGAATLLATRVDGRHRAILAERA
>NZ_CP027942.1|WP_137756581.1|2479167_2479464_-|co-chaperone-GroES
MSVSIKPLEDRIVIRQVEAETTTASGLVIPDTAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAEGDRVIYSKYGGTEVKFGGEEFLVLSARDVLAVVVR
>NZ_CP027942.1|WP_137756580.1|2478158_2479082_-|EamA-family-transporter-RarD
MRTTESGRGLALAVGAYAVWGVVPAYVVLMQGVAAIELVGWRVLASVVVAALIVTAVRGWGALCAVLRDRRSLLALGASGLAILVNWTVFAYAVLSGHIIETSLGYFLNPILSIVLAVVVLHERLRPAQWVAVGISVVAVVVLVVAYRSFPWIAILLALAFSVYGLLKKQVGARVDAITGFTLETAATVPFAIGMLVVSTIVAGPTILDVPPLVQLAVVGFGVVTAVPLMLFSAAARRVSLTTLGFTQYLAPILSLLFGWLVMGEPMPPERLIGFGLVWLSLAVLMVDLVVAEGRRRRSPAVPAPAP
>NZ_CP027942.1|WP_137756579.1|2476744_2477995_-|ABC-transporter-substrate-binding-protein
MKASLHQRSRRAALLAASTAGIVVLAACSTGGGAGGESDAPSDDPFIVGTILPQTGNLAFLGPPEFAGVDLAVADLEAADFPFDIEQIDTDSGDTTTDIAIQSAGQLVDAGASVVIGAASSGVSFTFIDQFVDAGIVQISPANTSPDFSTYDDDGYYWRTAPSDVLQGRVLGNLMVNDGAANVAFLYINDPYGIGLADNAGAAVEAGGGSVVASVSYNPGDTNFSSQVSEILAASPDAIGILAFEETANIIPELVSTQGYAASQVYFVDGNLSNSYEFPEGTLEGAKGTLPGNPADDTFQDRLLEIDDSLTDFSYAPESYDAVILAALAAAQGGSTDPETIRDNMQSVSEGGTKCTDVAECLQLIADGEDIDYDGVSGPIEFDDNGDPTEAYIGIYQYGADNRYTLLTTEFGSLNE
>NZ_CP027942.1|WP_137756578.1|2475001_2475841_+|ABC-transporter-ATP-binding-protein
MTAVLETKDLVAGYLPGVNILNGCSIVANEGDLIGIIGPNGAGKSTLLKAIFGQVNVRGGSIVLNGEEITGLKADRLVGKGVGMVPQNNNVFPSLTIEENLEMGLFQQPRMFKERFEFVAGLFPELAKRRRQRAGSLSGGERQMVAMGRALMMDPSVLLLDEPSAGLSPVRQDETFLRVAEINKHGVTIVMVEQNARRCLQIAHRAYVLDQGRDAYTGSGREMLNDPKVVELYLGTLATDVEEKAKTSTNAIVVDSGASAEPGGADEIAASSEPRDESK
>NZ_CP027942.1|WP_137756577.1|2474075_2475005_+|ABC-transporter-ATP-binding-protein
MSSATKTHPLVDGEVGPGCAKVDPIVVADGVRRQFGGLTAVDVEHVEIPRGAITALIGPNGAGKTTFFNLLTGFDKPNEGSWSFDGQSLAGVPAYKVARRGMVRTFQLTKSLGRLTVLQNMLLGATGQRGERLGSALWAFLWRKQEQENIVRADDLLARFKLDAKREDFAASLSGGQRKLLEMARALMSKPNLVMLDEPMAGVNPALTQSLLDHVLGLKADGMSVLFVEHDMHMVRHISDWVIVMAEGKVVAEGPPESIMQDQAVVDAYLGAHHDTDLGTLTNQEIQQIEQEAAEELDEVQAAREEDKA
>NZ_CP027942.1|WP_137756576.1|2473099_2474083_+|branched-chain-amino-acid-ABC-transporter-permease
MLDVLLGSLGELISASSAAYALAAIGLGIHFGYAGLLNFGQAGFMAIGAYSFAIFTSMANPTENWGWPPALSLLAATLVGIACATVFALILGIPTLRLRGDYLAIVTIASAEIVRFTVRTQDLTDVTGGSQGIRGTDYKGDIQAVNDGLLDLSNNTWYTLVSWIIVILAILLVWGLMRSPWGRVIKGIREDEDAVRSLGKNVYAYKMQALVLGGVIGAIAGILFIFPRAVQPDSFATTLTFNVWTALLLGGAATVLGPVLGGVLFWFLLSFVRGLIGELHDLGLFGAMSATQAGQLAFVAVGVALIALVVFRPQGIMGNKKELSFNV
>NZ_CP027942.1|WP_137756575.1|2471627_2473100_+|branched-chain-amino-acid-ABC-transporter-permease
MVTPPCNGHRAHRIPTRRASRTTGGHVETTLRRTRWWFPLIALLVAVGAAIGLGAAPADATSTPAPTDPSQTYQFQGIVRSDPQTPLAGVVITATGDGFEGTATTGADGRWSIAVPGPGAYTVTIDEATIPSGLQVNPEHVSREFTIGTTNSQGVLFQIGEPGSFDGAGSGGDDGEGTSSGSGSGSSSGESSSSRFSWSQLGQRLFTGLNFGLLLALGAIGITLIFGTTGVNNFAHGEMLTFGALVFYMLTTALHLPVWLSVLGVLVASAAFGWLHDAAIFRPLRRRRVGLVQVLIVTIGLSIALRYFFQFLFGGGSETLAVDNSAVISFGTFNVRVSNIVSMVVSVIILLAVAFFLTRTRIGKATRAVSDNSGLAAASGINVDRVIRIVWVLAGTLTGLSGVLYAYFVGASVRWDMGFIILLLLFASVTLGGLGSAFGALVGAVIIGLATELSTLWLPTDLRFAVALVILILVLLLRPQGVLGRKERIG
>NZ_CP027942.1|WP_137756574.1|2470040_2471543_-|IMP-dehydrogenase
MDTRDPFGFTGLTYDDVMLLPGRTDVIPSEADTSTWLSRRIRLAVPLVSSAMDTVTEERMAIAMARQGGIGIVHRNLAIAEQAAIVDRVKRSESGMITDPVTIGPDATVAEVDAICGQYKVSGLPVVDEGGHLLGIITNRDMRFVARADAASTLVRDVMTPAPLTTAPVGTSREDVLEIFRASKLEKLPLVHEDGRLAGLITIKDFDKVEQYPFATKDEHGRLRVGAAIGFFGDAYDRAEALLEAGVDVIVVDTANGESQGVIDIVTRLKGDARFDGVDIIGGNVATREGAQALVDAGVDAVKVGVGPGSICTTRVVSGVGVPQVTAVYEASLAATPAGVPVIADGGLQYSGDIAKALVAGASSVMLGSLLAGTDESPGDLVLINGKQFKTYRGMGSLGAMQTRGKKTSYSRDRYFQADVPSDEQLIAEGIEGQVPYRGPLATVAYQLTGGLRQSMFYVGGRTIGELQTKGRFVRITAAGLKESHPHDIQMVVEAPNYRR
>NZ_CP027942.1|WP_137756573.1|2468798_2469725_-|hypothetical-protein
MPDPLDIVQTSQVHALGLVPSRSRGLARVRRGAYVDAAALAAADPEQRYRARVKAVGLARPGIVLALESALMLHGLPFGSEPSHVFSTGDPAMSGGRAGVRNSHLPIRPEHVVEVEGLRCSSVAWTLADIGRRRIPSAAVASVDAALAAGTVDVDDILGALAYQSRQGGARARWSVAFADGRSESVGESRSRVAIALLGFPAPELQVEVRTDLGSFRADFGWRLDDRWLLGEFDGLVKYGALASASGRTGVDALVAEKRREDAIRRVADLCRWTWDDVVRPERLARILRAAGLRRRDPVLPAGVRLLP
>NZ_CP027942.1|WP_137756584.1|2481987_2482386_-|hypothetical-protein
MAPCPGEHRTPAADRDRARGTRRRRLPCAGDRPARDARDRRIRLGRHAAPAAGIARRHRPRRRLDRADPALGGGRTPARRRRHRARRARARRDRREHRALRRDARRALPGTAHRTMTRMGASPGIVAVRAIA
>NZ_CP027942.1|WP_137757324.1|2482438_2484067_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MALDAWTPTGSAPPASSPRSRPAPGRAARRSTCARPTPCRAPPRSGSRRDRPAHGDARRPRRRHGDRDRVVRPHRVGARHDGRGDGERLGPLRGRRRRRRLDRRLRRPARGRRRGRHPDDRGRRVRTRHGPRASPAAAGAAGRARPRRHRAVPRGARGQRARPRALPVGGIRRDRRAPRVLPAGGRRRDLDAEGPVVIPLVLGIETSCDETGVGIVRGDELLANVVASSMDLHARFGGVVPEIAARAHLEAMEPTIRRALDEAGVTIADLDAIAVTAGPGLAGALMVGVGAAKALGVATGLPVHGVNHLVGHVAADALAGGPIEAETIALLVSGGHTSLLHVRDIDEDVATLGETIDDAAGEAFDKVARLLGLGYPGGPSIDAAAADGDPRAIAFPRGLTAPKDRERHRFDFSFSGLKTAVARHVERAADADSVSVPDVAASFREAVVDVLVTKALDACAHTGVPRLLLGGGVVANRRLREVAAERCEAAGVVLRVPPLSLCTDNGAMIAGLGARLVARGAAPSAPGFGVESTLDASVVQVG
>NZ_CP027942.1|WP_137756585.1|2483918_2484482_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MILAIDTSLGTSIALVDAGRVVAAHDEHDTRRHAEVLDVALAVVLGDHRDAVTQVVAGLGPGAFTGLRIGIVAARTAALGLGVPWVGVCSHDAVGVAEPGLVQVTTDVRRRERAWSLYRGGARVQGPALAPAAAVPVIDGARRVDADWIGAAGLVAALAAGAGSSREAIYLREADAVPSAAPKRVTS
>NZ_CP027942.1|WP_137757325.1|2484478_2484931_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MEALGRRLAGILEAGDVVVLTGELGAGKTTLTRGIGDGLGAVGTVQSPTFVIARTHRTATVPLLHVDAYRLGDEAELDDLDLDVDASITIAEWGLPLVHAVDTWLHVEIERTIGGDAGEADADEPRTVRLTGHGDRWPASRLLAFARETA
>NZ_CP027942.1|WP_137756586.1|2485386_2486355_-|alanine-racemase
MARAVDASAIVANLQTIVRRTDALVCGVVKADGYGHGAVLAARAMLDGGASWLGVVDVDEAIALRAAGVEAPILTWLHAAEPDLAPAVAARVDVGVSSLAQLEQAAEVGATVHLKVDTGLGRNGVPMGEWPQVVARATALQASGRLRVRGVFSHLAGSGPDADAAQAAAFADACALAAGLEPELRHLANSSATLAAGGVALDMVRVGIAAYGIHPDGDDAQGSAAAAAGLRPAMRVTGSVVDGVLDVGARHGLLPAPGAPVLVGDRVVPVAEVGVAATRLAEAVSGAAVLWGDPARGEPSAIAWAHAAGTIGYEVVTRMAAA
>NZ_CP027942.1|WP_137756587.1|2486354_2486720_-|holo-ACP-synthase
MIVGLGIDVVDVARFERAVSRTPGLAQRLFADRELVVGGAARPVRSLAARWAAKEAAAKALGTIEGQRWRDLVVASDAAGAPSLELGGAWAALAASRGVTSVHLSLTHDAGVAAAVVVAES
>NZ_CP027942.1|WP_137756588.1|2486716_2488564_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYAGPRDTVEVLLEGLGRLEYRGYDSAGIAVVAPDGLASRKRGGKLGVLRGSLEDAPLPESSIGIGHTRWATHGGPTDENAHPHLGDDGRLALIHNGIIENFAALRAELVAAGETFTSETDTEAAALLLGRLFREHGDLTQAMLALVRRLEGQFTLLAVHVDQPGVVVGACHNSPLLVGLSQGEQFLASDVSAFVRYTRMAWALGNDELATITPDGVEVVDFGGQSVEGAPFEVTWDAAAAEKGGWSSFMAKEVAEDPEAVANTLRGRIVDGLPALGELGALDDDVLRGIDRVQIVACGTAAYSALVGEYAIETWARIPVEVDLAHEYRYRDPIVDERTLVISISQSGETMDTKMAVQHAIEQGARTLSICNTQGSTIARASEAVLYTHAGPEVAVASTKAFLAQVVALLLTGLHLGRVRGTIADDAVREVTAALEALPEQLRTLLGEQDAIRELAHWMSGTRSVLFLGRHVGYPVALEGALKLKELSYIHAEGFAAGELKHGPIALIEPGQVVFVVVPSPRHQQGLHAKVVSNIQEIRARGARVIAVAEAGDAAVLPYADQVLRIPLTLPLLEPVLSVVPLHLFALELATAKGLDVDQPRNLAKSVTVE
>NZ_CP027942.1|WP_137756589.1|2488620_2489550_+|type-I-pantothenate-kinase
MVHQQTPFVDIDRVAWSRLAPMTPNPLTEREVARLRGLGDRLELREVAEVYLPISRLVSLYQESARRLHAETASFLGERARPVPFVIGVAGSVAVGKSTTARLLQELLGRWEGSPRVDLVTTDGFLLPNAELERRGLMQRKGFPEAYDRRALLAAISKVKAGVEEVEVPVYSHLTYDIVPDERIVIRRPDILIVEGLNVLQPPASKAHMAVSDLFDFSVYVDARTASIREWYVERFLALQRGAFQQPESYFHRFADLDEQAARAYAVGVWDAINGPNLVENILPTRSRADLVLRKADDHTVRSVLLRKI
>NZ_CP027942.1|WP_137756590.1|2489513_2490530_-|DMT-family-transporter
MLDRRGFGLLLCIAAAASFGLSGIFASALIASGWSPGAVTAARISLAALVMLVPALLALRGRWATLWAGRWQVLLFGTFAVAICQLAYFSAVQRIPPALALLIEFLGPVLLVGWTWARTRRSPAALTLVGAGLAVLGLGLVSGVGQAESLDPIGIGLALVSAVGNAVYWASAASTTHGLPPVTLAGLGLAVGGVLLLVAGAIGILPMTVATAPTELAGMQVPMMATLAVLVLVATVAAYVLGVSGVRRLGATLSSFLGYSEPLFGVLWMALLLALVPTPVQWLGGAAILAGVVLVRAGELRRPRDERDAVTAPVELPLVVPEEPATDQILRRSTDRTV
>NZ_CP027942.1|WP_137756591.1|2490604_2491144_+|CGNR-zinc-finger-domain-containing-protein
MVTPLRLPTETVAALEAVVAIATAANAGALDDAAGLDAALGDIRYTGSRAHDDAEAREVRDVVPALLAMWDAERDDVPALANAILRGADAAPQLVRHDGIDWHLHAIDPERPLAERIAVETAIAFVDLIRLDETDRCKRCAAGDCGLPMLDLSRNRSRRFCSTACQSRVNVAAYRARSR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP027942_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP027942_8

2800219-2800485

Orphan

Consensus_repeat	Method
CGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGG	CRISPRCasFinder
TCGCTTCGCTCGCACCTCAAGGAGCGG	CRT

3 spacers

The CRISPR arrays of NZ_CP027942_8

>merge|NZ_CP027942|8|2800219-2800485|CRISPRCasFinder,CRT
CGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGGGACTTGGAGACGCTCGCACTTCAAGGCGTGCGGGAACGGGACTGAGAGACGAGCACTGGCGGGCTCCTTTCGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGGGATTGGGGTGCGTTGGTGGGATCCTTTCGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGGTCATGGGGAGGGCTTCGGTCGCACCTCGAAGAGCGGTTACGAGGTCGCTTCGCTCGCACCTCAAGGAGCGG

>NZ_CP027942|8|5|2800219-2800485|CRISPRCasFinder
CGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGG	GACTTGGAGACGCTCGCACTTCAAGGCGTGCGGGAACGGGACTGAGAGACGAGCACTGGCGGGCTCCTTT
CGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGG	GATTGGGGTGCGTTGGTGGGATCCTTT
CGAGGCTCGCTTCGCTCGCACCTCAAGGAGCGG	TCATGGGGAGGGCTTCGGTCGCACCTCGAAGAGCGGTT
ACGAGGTCGCTTCGCTCGCACCTCAAGGAGCGG

>NZ_CP027942|8|2|2800256-2800485|CRT
TGGAGACGCTCGCACTTCAAGGCGTGC	GGGAACGGGACTGAGAGACGAGCACTGGCGGGCTCCTTTCGAGGC
TCGCTTCGCTCGCACCTCAAGGAGCGG	GATTGGGGTGCGTTGGTGGGATCCTTTCGAGGC
TCGCTTCGCTCGCACCTCAAGGAGCGG	TCATGGGGAGGGCTTCGGTCGCACCTCGAAGAGCGGTTACGAGG
TCGCTTCGCTCGCACCTCAAGGAGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP027942.1\|WP_137756853.1\|2811408_2811954_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_CP027942.1\|WP_137756854.1\|2813411_2813999_-\|glycolipid-binding-family-protein	unknown	unknown	gnl\|CDD\|377662
NZ_CP027942.1\|WP_137756842.1\|2794658_2797064_-\|DUF429-domain-containing-protein	unknown	unknown	gnl\|CDD\|226778
NZ_CP027942.1\|WP_137756849.1\|2802570_2803572_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214891
NZ_CP027942.1\|WP_137756839.1\|2791710_2792439_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756847.1\|2800591_2801689_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379536
NZ_CP027942.1\|WP_137756838.1\|2790882_2791614_+\|leucine-efflux-protein-LeuE	unknown	unknown	gnl\|CDD\|236807
NZ_CP027942.1\|WP_137756851.1\|2805654_2810331_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238020
NZ_CP027942.1\|WP_137756843.1\|2797084_2798137_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379536
NZ_CP027942.1\|WP_137756852.1\|2810453_2811356_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP027942.1\|WP_137756841.1\|2793965_2794601_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|223979
NZ_CP027942.1\|WP_137757348.1\|2812339_2813314_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP027942.1\|WP_137756855.1\|2814151_2816431_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP027942.1\|WP_137756844.1\|2798148_2798781_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_CP027942.1\|WP_137756850.1\|2803640_2805020_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP027942.1\|WP_137756840.1\|2792435_2793875_-\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP027942.1\|WP_137756848.1\|2801708_2802548_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
NZ_CP027942.1\|WP_137756846.1\|2799769_2800198_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756845.1\|2798843_2799455_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP027942.1\|WP_137756837.1\|2790357_2790801_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP027942.1\|WP_137756853.1\|2811408_2811954_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.23113e-09
NZ_CP027942.1\|WP_137756842.1\|2794658_2797064_-\|DUF429-domain-containing-protein	gnl\|CDD\|226778	COG4328, COG4328, Predicted nuclease (RNAse H fold) [General function prediction only].	1.20278e-38
NZ_CP027942.1\|WP_137756852.1\|2810453_2811356_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.14798e-45
NZ_CP027942.1\|WP_137756847.1\|2800591_2801689_+\|hypothetical-protein	gnl\|CDD\|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	3.74094e-08
NZ_CP027942.1\|WP_137756838.1\|2790882_2791614_+\|leucine-efflux-protein-LeuE	gnl\|CDD\|236807	PRK10958, PRK10958, leucine export protein LeuE; Provisional.	9.90249e-85
NZ_CP027942.1\|WP_137756855.1\|2814151_2816431_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.43854e-09
NZ_CP027942.1\|WP_137756843.1\|2797084_2798137_-\|hypothetical-protein	gnl\|CDD\|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	2.76177e-08
NZ_CP027942.1\|WP_137757348.1\|2812339_2813314_-\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.83075e-70
NZ_CP027942.1\|WP_137756841.1\|2793965_2794601_+\|NUDIX-hydrolase	gnl\|CDD\|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	4.04591e-10
NZ_CP027942.1\|WP_137756844.1\|2798148_2798781_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	2.74381e-08
NZ_CP027942.1\|WP_137756850.1\|2803640_2805020_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.1518e-39
NZ_CP027942.1\|WP_137756840.1\|2792435_2793875_-\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	3.95648e-45
NZ_CP027942.1\|WP_137756848.1\|2801708_2802548_-\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	4.77776e-11
NZ_CP027942.1\|WP_137756854.1\|2813411_2813999_-\|glycolipid-binding-family-protein	gnl\|CDD\|377662	pfam06475, Glycolipid_bind, Putative glycolipid-binding. This family has a novel fold known as a spiral beta-roll, consisting of a 15-stranded beta sheet wrapped around a single alpha helix. It forms dimers. It has some structural similarity to the E. coli lipoprotein localization factors LolA and LolB. Its structure suggests that it may have a role in glycolipid binding. Its genomic context supports a role in glycolipid metabolism.	1.69198e-40
NZ_CP027942.1\|WP_137756851.1\|2805654_2810331_-\|hypothetical-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	9.84738e-15
NZ_CP027942.1\|WP_137756849.1\|2802570_2803572_-\|hypothetical-protein	gnl\|CDD\|214891	smart00894, Excalibur, Excalibur calcium-binding domain. Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis and several other surface-exposed proteins from diverse bacteria are encoded in the genomes in two paralogous forms that differ by a ~45 amino acid fragment, which comprises a novel conserved domain. Sequence analysis of this domain revealed a conserved DxDxDGxxCE motif, which is strikingly similar to the Ca2+-binding loop of the calmodulin-like EF-hand domains, suggesting an evolutionary relationship between them. Functions of many of the other proteins in which the novel domain, named Excalibur (extracellular calcium-binding region), is found, as well as a structural model of its conserved motif are consistent with the notion that the Excalibur domain binds calcium. This domain is but one more example of the diversity of structural contexts surrounding the EF-hand-like calcium-binding loop in bacteria. This loop is thus more widespread than hitherto recognised and the evolution of EF-hand-like domains is probably more complex than previously appreciated.	4.24207e-17

>NZ_CP027942.1|WP_137756846.1|2799769_2800198_+|hypothetical-protein
MQPENWGVLGIPTNFVATATDHVQQGTLLGQPVEVRWRPVAFTFDYGDGTVVTTDDAGALWQASDDDWTSTATSHEYQTRGDYTATVTITFEADLATDGAWATVPGTLELAAPAEAVQVFEVQTVLTRGDCIAYPNDPGCSP
>NZ_CP027942.1|WP_137756845.1|2798843_2799455_+|hypothetical-protein
MDNSTVVAEAARMVSGMDRRTRWMRWGAVGAAAVVALAGCGGGDEPEPSASPAQTDPEPTLSNDEFATNAADTAIEFVALTDRAFADLEVPPELYELTTDEIAANIAADVDEYLQQGYRLEGSSALINITPLSVQPSAEDSAVVSLEACLDTSGSQVVDGSGQPISGGGSERRPVTFEVRWQNDMGRVVATAFPGTSGDPECV
>NZ_CP027942.1|WP_137756844.1|2798148_2798781_-|VWA-domain-containing-protein
MTDPSYTAMLLVIDRSGSMSTIRDEMVQALEVMIAEQRKEPGLLTVDVVTFDDRIEHAVVLGDPEVVRIELEPRGATALYDAIGVAVQQFGARLAAMPEHARPSTVQVIVVTDGLENASQEWTAESVKATVERQRTEFGWDFVFLGANQDAVLTGARLGFARDASMTYAPAPGAVGAAGASMSRYMSDLRRGERRGFDGDERGSAMGAGS
>NZ_CP027942.1|WP_137756843.1|2797084_2798137_-|hypothetical-protein
MDDEVARAARSIEANPLGRLMHGQRELFHSNLIAWFFDALPEAADAVFRPFMVDGDVASRSIERERSHLDLVVRLPGRSPLVVENKVFALPDAVQLRRYEDAVARWSTPPAFVLLAASTPDFALGRWTHIDYRELAAAIEAALPSGSSYEVETMRRYAALARDVQSLVDAVAVRSEGESVWLAPRVLDVIGSRQTRAALHKARATHVARHLRALDLGDRWRIRADMTRGTPLVEAFARVVDDGLDVRLGWQLQGSQLRRAVIFDEPIARGRDEGAKDVRTSLSRAHPSWFALPPEFDAVGSSEFNHYAPDFVYRYAKAPALTVADLAGFASWVSQRVAPLESRRSASGPS
>NZ_CP027942.1|WP_137756842.1|2794658_2797064_-|DUF429-domain-containing-protein
MQSLVHIGIDLAWGPRNRSGVAAVDERGALLASATVTTDDEIVAWVERHASRTGIVAMDAPLIVANESGSRRCEQEIHAAFGRFDAGAYPANTSNPHFDPPRALTLAQRMGLGIDAESAQRERVAIEVYPHPAMVGLFALDRTLKYKRKKQGFAVQHAETLRLLALMEGIAALRLQHAPSWLAIRATVEAATGPGALGRVEDEIDGIFCAHLAWLWAQGSDALQVYGDVREGYIVAPPPPTWAPARRTRSAADASVDSSEATIADEPSLETVAEDAPHPASHVFVTRGDLLHLACDAWLLPSDQRGEVTGRWDLEDIHDRVRRSVPDEFVEGRRLAVPLAGGETHEGPTPILTAVPLRGVEAPGGMQHLIRAVRDFVAVGAAVARARSTRVVPLLAMPSFGTGAGGGARVRGEVLAVLLRTARSAAAEHGVDVAIVIQDAATFAHVQHGRRSAAGGEHDPWLELTAEQRVEVERLARFARAGRLVPFMGAGVSVSGGGPTWRALIERLADRAALTDHERDSLLRADRSPLDQASILESRFGASDEDRIAFREAIASQVALARYGLAPALLATLAPSQAITLNYDRLFEQAAEDVGGDRLAVIADREVDPDARRWLLKLHGTIEDPATIVLTRGDYLGFAASRGALSSIVKAHLITHHLLFVGFGFGDDHFHEIVHDVRRAVRHVGEHPSATALQVRWDPLDAALLQGTARAVPMDVEGADFASATGWAGRQVEILLDALVALSADSHDYLLREGFDSALTPDDKVLREHVLTFVEGLPQQARGSTAWGVVQRALAALGHEA
>NZ_CP027942.1|WP_137756841.1|2793965_2794601_+|NUDIX-hydrolase
MASVTSHHDASGRSLADYPRPSVAVDTAVLTVDGDALRVLLVDAPERRGRRLPGTFLHAGETLEDAVRRSLEHKAGVTGVRPSQLHVFDALDRDTRGWVLSVAHVVVVPPQAAGHASLVPIDDAHGLDFDHDDIVTRAVAWMRGRYAEHPDPDGVLDDAFTLRELRRVHETVAGQRLQPDTFRRAMLPHLAETGEVARGGVGKPAQRFRRR
>NZ_CP027942.1|WP_137756840.1|2792435_2793875_-|ADP-ribosylglycohydrolase-family-protein
MRLSTIQKDRAVGAVLASAVGDALGAPYEFQAPLPSDRDVVLRAGGPWELGEWTDDTAMAVPILRALAEGRRLDDDRTLDRLIAEWSGWRRGAKDVGIQIGRVLGTIRSLTADDARRAARILHEQTGRSAGNGSLMRTGPVALAFLDERPGTVERLASAARSISDLTHFDPEAGDACVLWSLAIRHAILTGELDLGGGLAALPSERRGLWSERIDEAETRMPWDFPKNGWVVQALQAAWSAISHGDSLVQRLVLAVRCGNDTDTVAAIAGALAGAAQGVTAVPFAWRRHLHGWAAADRVGTHRDLQRWAVLAASHGRVDRVGWPAAERFPVGADATLVQHPLDERVWLGDLASLDRLPREVDAVVSLCRVGAAQVRVPASEHHLVWLVDADGENANVDGTLADAADAIAELRREGRTVLVHCFEARSRTAAVAATYAVRHLGVESDRALASVAATLPNYGPQRFLLDAVRRAATAESRR
>NZ_CP027942.1|WP_137756839.1|2791710_2792439_-|hypothetical-protein
MIADRFLLQQAWWILSELCRRHERTVMDRFVHEQHGGVLLAKRIGKAAEPETNVGVAANLVDGIRIMQRSGSTLIPWAEVFEAGDAHAIVRHIERISPLGPVESAPSTTHRTLVYRLAARILASRLDDRHDWSIEPLDAAAAIQGERTIASLGEAVTLPTVRADLEHQRQSFATTTAFASDHPVFVPHLWVVRRDVDVAMVLDTDGFVHTRSRGLVPVERIYEEHGRDLDRVLHAVWEATRE
>NZ_CP027942.1|WP_137756838.1|2790882_2791614_+|leucine-efflux-protein-LeuE
MLGVTDLGGYLAGLVVIILMPGPNSMYVLSVAARRGIRAGYVAASGVFLGDAVLIVLTALGVASVLAANPMLFTIVQWGGAAYLAFLAITSLRAAWKQFRQRRVLRAPEDTSPIDLVRLEAAGIDAGELDVSREALATTPAKVERPFRRAFIVSILNPKAILFMFAFFVQFVDPTYEAPALTFTLLGGLLELGSALYLTTLILVGSRLAAAVRRRPLIAAGGNAAIGTVFLGFAAKLVTSPLH
>NZ_CP027942.1|WP_137756837.1|2790357_2790801_+|hypothetical-protein
MAPRAKTLDIPLSTGPIRVNSDEHYVLSLCEQIVGRKALREFSFDWLRADPDARGTRRKLPVDAYWPEHSIAAQYYAGPIIPDLMTASVRTLQRIAYDQRRRTECARYRIQLIEISSEQLAHRGTKLLRDIEHDIAALRPLVAAAMP
>NZ_CP027942.1|WP_137756847.1|2800591_2801689_+|hypothetical-protein
MASHAYEFLEEPFVGAFEPPAPVNVFTLTGTARVEPVASTVLAFLLDPNERHRFGTTFVDALVTLLDGAATERGPFDAGRCAGSSEWSVTTETRAGVGDRVDVLLENEHLDVAIVVTTGAEPGSDERGRQLARIRDVRATVVEATIARARTRPDLATDATHRIHSLAYDDLFDAADAALYDVGPVAEQRSLELYAQFRESMSERIARMTIEHEQRRLDELWSAIGQRQDQVLDFFTALDAANAVLVARATRLRRAIDERLHAAGAPHSSSIVNAGDHAWGRSRGERALVYLGFAPSTGGAIELLVGWLPRTGTFGYAVHAHRERERPPRTWDHIPLGLPFDADEDAVADRFAHLALRWAAGERPD
>NZ_CP027942.1|WP_137756848.1|2801708_2802548_-|HNH-endonuclease
MSGFLRSGFGLLSIVALLLSVVALVGSLVLPRMLGAGQPSSSPAAEPVASGSPSSSPSVTPSEPASTPSPSAPVEAAPPPAPPTAAEGALQALATIPVTDASAWVPDYRRAEFGDAWIDVDGNGCSQRQDVLMRDLDQIVMFADGSCRVQTGVLDDPYTGVLVPFQHGEQTSQAVQIDHLVPLALAWRSGAWAWSPEQRVQFANDTSLLLAVEGGINQSRSDSDLAEWLPPEADARCGFVITIVEGVARYGLSMTAASHATAEAVLTGCGDEPGIVPAD
>NZ_CP027942.1|WP_137756849.1|2802570_2803572_-|hypothetical-protein
MRATPRASLARACRDRYSLAYDESSVPGYDRPTLLLTQPRAVEVRMDERAMGWMPDRAEAAQDWAQQRAQSLPWARGEQRVPNPMAPAPGPTVPVPNPTAAMPMPGGVPVPTAPIPQRSPGAVPNPMAFAGAPGGGHPFDGGGRAKRRWPRVLLIGAGALTLFALGSCAGGLGQAGEVQSLQSELATTTTELAGAIAESDELQLLVDEQAEDVLAAEDEVDELASTLTSVEAELATAQTDLAAAQSTVAERDATIASLQAELATAQAAAAAPAPAPVAAVPQAAAPAAPVAPSNVYYQNCTAARQAGAAPVYAGQPGYGPHLDRDGDGVGCES
>NZ_CP027942.1|WP_137756850.1|2803640_2805020_+|APC-family-permease
MADAPAARTVEPDETGTKLKRGITTLLLFFFIVGDTLGAGIYTLVGTLAQDVGGALWVPLLLALVLALLTAGTYAELITKYPHAGGAARFAERAFKKPFVTFLIGFLMLSSGITTSAALANAFAGDYLQALVPNAPTVAVTLIFIALLILINIRGVRESLIANVGATLIEMTGLIIIIVIAALVIFGGGGDPGRLTTFADGVPPISGAFAATITAFFSFLGFEAAANMAEEVKDPSRSYPRALFGAILTAAVVYLAIAIGAAVVVPTDQLATSEGPLLEVITASGFSFPSWLFAIIALVAIGNGALLFMVMASRATYGLAEAKLLPKVFGAVLSGRRTPWVAILTVGIVTMAMSFVGDVGTLADTTVLLLVLVFISANISVLVLKKDQVQHKHFSVPRIVPVLALIASIGLLTQQSGTTWLIALGYVVVGTILFLIARIARKREHERGTAEPTRAIPLE
>NZ_CP027942.1|WP_137756851.1|2805654_2810331_-|hypothetical-protein
MAHAARTASVRSRHVLRSLLAGASAAAVALGGLLLAPAPAAQAASTIDQQNPRSAVDFVFDATVPFEETQTFTAGRSGLLDAVDFDVYEIAAPGTTITATLSAVGGSAPIAGSGSAQVLSTGWLHIPISQPPTVLAGSTYMVTFTGSGSGIVRFSTNENYPGGISGAGDDLVFRTYVQAGTAPSVSGTLPRATAGQPYAAGFVLQGSPTPTVRLWPGTSLPPGLTLSPSGVVSGTPTAAGTFDFAVDATNAFGAHSIAASIRVDPTVPGMVQDLAVGQQGDQMVLTWSAPRDTGGLPLSYRVRVGDRDWQTTDATSLVFDLAPGSRVDVTVLAINDFGFGAPSVVQATRITEPATPAAPTVEIVGPGSVRVTWVEPAMNGGTSRGYWVLTPNGTRFVSGLSIELDVPLGTVQEFRVSALNEVGQSAYSEPSSVYVPEAPRAPSGLSSFTSSDSVRLDWNAPFDPYGTPVQQYVVERLVGGVWVQHATLPGDRVGTYVTGLPLGEVSQLRVRAQNISGLGAPSGTVSVQPMRQPDAPTGLETQVGDGTIDVAWMAPAEDGGSAITSYVVQYRVGTDAWIDLPESEIDGTYAWIMDLANGVEVQVRVAARNGLGLGAFATVTATPRAVPGEPIGVVAVGGDRSIALTWAAPLYDGGADVFGYLVQQRIAGGEWTDVSSVAGTELALDDIANGTRVQLRVAATNEVGTGPWSTVVTAVPHTLAAAPDWQTVAPHEGGAVLSWTVPDGGGLPIDWYIVELRASGGEWMVFDRVPGYLPWTFLSSLVDGVTYEVRVHAVTGGGDGALSAVESFTPRRAPDAPTDLVAVPGDGSVTLSWVLGDDGGAPVTSVVVERRIDGGDWTAVDGVDDTQVVLTGLANGSTVELRVAAANDAGRGAWSAIATATPHTIAAAPTWIIIGPHAGGAFLSWTVPGDGGLPVDEFVVEVRAPGGDWEVVDVAPATRPSSLIFGLADGVVHEVRVHAVTAAGDGVPSAIESFTPRRVPDAPTSVVATPGSGSADVTWAAPAFDGGAPIGGYLVEHRAVGETAWTMLDPITAQSATIAPLDDGTAYEVRVTAFNAAGRGFWSDVVTVTPRSVPDAPTGVSALPASQSILVEWSAPAWDGGDDVTGYLVELHRLGDVDEDGAPRWTAPASVDVDGTTAVVSGLVDGQPYDVRVAAVNAAGTGPWSGYASTTPRSVPGAPATLAAAAGAGAVALTWTPPATDGGAPIQSWIVEHRVAGAQAWATPAGLEQASSTGVVVTGLADGTTYDFRVAAANVAGTGAWSEVVTATPSRVPDAVTGLEATAGDGIVTLRWDAPAFDGGSPIVEHAVTATIDGVDVPVDVVVDGTSAIVSGLQNGVPVTLSVAAVNANGAGTAVSVVATPFRFAPTLLGPGGAALAGSTLRAGDVVEIRASGLPAGAIAVVELHSTPIELGRGAVDADGVLAMSVTIPGGVEPGAHEIVVRLEAADADAPISRTPITIAGPIVTPPVVDPPAVTPPVAPVPAAPAPTGGAQASGGSDALPRTGVELLLLPMLLAGAALVLGGAAVRRRATTRRATAR
>NZ_CP027942.1|WP_137756852.1|2810453_2811356_-|Cof-type-HAD-IIB-family-hydrolase
MGWMRGRRTRASDPIREASMPHASDARVVFLDVDGTIMDEAARVADSTIEAVRQARANGHTVLLATGRAPGEVPDHVAAIGFDGAITAGGGYAAIGDEQVLERTMDAELVARMVAVFQDAGVEYYLQSREGVYPTEGVHRLYAWYLREFAGETFEGIEPHEHPRVAPLVQREPLPTDHVAKAMFLGEDLGNFARISEALGPDFHVITGTMPNLGTASGEVSRAGVTKGAAIETLLPMLGFTAEQAIGIGDSSNDVEMFDVVGTGIAMADAVVEVRERASESTTGVLDDGIWNAFVRHGLV
>NZ_CP027942.1|WP_137756853.1|2811408_2811954_-|NYN-domain-containing-protein
MTERTTYLLVDGENIDATLGQSVLGRRPDPHERPRWNVLLDFAEQEWQQPAKGLFFLAVQETLPMSFVQALLAMGYTPVPLQGEGKVVDIAIQRTAEALRDRDDDVMLVSHDGDFAPQMTALAGNGRRLGLVAFGEFIATSLRQVPGIETFDLEYEVGAFTSRLPRVRVISIDEFDPAQFL
>NZ_CP027942.1|WP_137757348.1|2812339_2813314_-|alpha/beta-hydrolase
MTVAAGVVLGAVAARQVAAARQVDPQYRSPVLLLPDLPLARPLAALSRVLPARPSPIADGVVVTDRLVPGRDGSQVRVWVCEPERDGDEPLPAVLHLHGGGYVLGHAVESLERCSTIAAEVGVRVVSVDYRLAPEHPFPAAIDDCVDALRWIVASSDAEGVDASRIAVVGDSAGGGLAACTAQTATDLGIQLAIQVLIYPMLDDRTRRRVDDRGRYAWSAASNRYGWSSYLRGVDPATPGAVAARRPDLAGLPPAWIGVGDLDLFHAEDVAYAARLRAAGVEVELVEVPGAHHVFETLRPDAPGSRAFERAIREALRAALVSDG
>NZ_CP027942.1|WP_137756854.1|2813411_2813999_-|glycolipid-binding-family-protein
MGADEEVGMRMYAWQRADESTGHSVARVSAIDGGRRYQGTEVLATPTAVSCTFTVDVTGESRPVRAIVRAFSQLGSRVVELTTDGWRWSIDGQHRPALDGATDVDVAATPLTNAIPIRRLGHLAVGEEAVMTVAWVDVPSLAVRRVEQTYTRLEPVDGLAAWQYGDREHGAFRLLVDADGVVVDYEGFATRVSPR
>NZ_CP027942.1|WP_137756855.1|2814151_2816431_-|hypothetical-protein
MDPRGTPEPGRPGEGSPWSHRDARPDAPRGAPHGSEQQSSPSWPSAPGPQAAGGAASRTPEGQPPPWARPGQQHQPPPSPAYGSAQPPHPETPPASPAYGAPTSAMPLQHAHVPTGAMPLQGPPPTGSHPWQHPTSSASRRRTPDGRTTFTRVLRAWWAGRLRRLVPRGVAWTAVAFAAVLLAAWVLFADILLTPGVVQVFPGQAPSRDWAHDVIGWVALQITFGLGFASVTLLLLLERARLRWIAVPVAVLSSAITLNMVVSGPGQAPQWIAGIGASGLVAAVLAVLAVLLPRPRVHLAVGAATALVVQWGLVTWVGAIEPTQWVFLRAWIDLAFPTLIVVAFAAILAVAFYAQQVHERADLIGRRILVASWAPVLAASLALVVVLVRMGPLSNLFGDLDANLWGWASWHSWPHAIVVGGLVVWLVARSGRMPLRPRGHVLTILVLAAMAGMAFLSFAATAIVGALGGSEQLSDAVLDVTLVYGNLLGLACTVLLLVPLLVPRFRRSTGRLGAIVAIVVAVPLQLWLILRNDLLMVTLPRFAASPSQIVLVIVVAVLALAIWGAARRRDVVDRHLLLRLAIVPLATAHAGQLLPGVWKDDLEQALIVVLSLLGLLFLGAPRTGTKEGDAIAVVWPFATQVLVLGSVIVARTMGQLMDDETTSIAVLYLTIPVAAVLCCRLEDPRDAWVRGAATVDLETMRRGRALGLVVALEGGWGAPAPVGVGAMGGPPPQPGPVPAPPGPWQGAASPWPPQPPPQR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP027942_5	5.1\|2136099\|59\|NZ_CP027942\|PILER-CR	2136099-2136157	59	NZ_CP027942.1	2136281-2136339	2	0.966
NZ_CP027942_7	7.1\|2481168\|21\|NZ_CP027942\|CRT	2481168-2481188	21	NZ_CP027942.1	2919637-2919657	2	0.905
NZ_CP027942_7	7.1\|2481168\|21\|NZ_CP027942\|CRT	2481168-2481188	21	NZ_CP027942.1	2919682-2919702	2	0.905
NZ_CP027942_7	7.3\|2481261\|18\|NZ_CP027942\|CRT	2481261-2481278	18	NZ_CP027942.1	499221-499238	2	0.889
NZ_CP027942_7	7.3\|2481261\|18\|NZ_CP027942\|CRT	2481261-2481278	18	NZ_CP027942.1	2023717-2023734	2	0.889
NZ_CP027942_7	7.3\|2481261\|18\|NZ_CP027942\|CRT	2481261-2481278	18	NZ_CP027942.1	2816306-2816323	2	0.889
NZ_CP027942_7	7.3\|2481261\|18\|NZ_CP027942\|CRT	2481261-2481278	18	NZ_CP027942.1	3048665-3048682	2	0.889
NZ_CP027942_7	7.3\|2481261\|18\|NZ_CP027942\|CRT	2481261-2481278	18	NZ_CP027942.1	3081201-3081218	2	0.889

1. spacer 5.1|2136099|59|NZ_CP027942|PILER-CR matches to position: 2136281-2136339, mismatch: 2, identity: 0.966

agctacccctccgccaccccgaatcgcctgcgaaacgctctccacgcgcgcgtccccac	CRISPR spacer
agatgcccctccgccaccccgaatcgcctgcgaaacgctctccacgcgcgcgtccccac	Protospacer
** *.******************************************************

2. spacer 7.1|2481168|21|NZ_CP027942|CRT matches to position: 2919637-2919657, mismatch: 2, identity: 0.905

ctggccgtagccggcctgctg	CRISPR spacer
ctgcccgtagccggactgctg	Protospacer
*** ********** ******

3. spacer 7.1|2481168|21|NZ_CP027942|CRT matches to position: 2919682-2919702, mismatch: 2, identity: 0.905

ctggccgtagccggcctgctg	CRISPR spacer
ctgaccgtagccgccctgctg	Protospacer
***.********* *******

4. spacer 7.3|2481261|18|NZ_CP027942|CRT matches to position: 499221-499238, mismatch: 2, identity: 0.889

cgacggggtcgactgctg	CRISPR spacer
cgacggggtcgtcggctg	Protospacer
*********** * ****

5. spacer 7.3|2481261|18|NZ_CP027942|CRT matches to position: 2023717-2023734, mismatch: 2, identity: 0.889

cgacggggtcgactgctg	CRISPR spacer
cgtcgcggtcgactgctg	Protospacer
** ** ************

6. spacer 7.3|2481261|18|NZ_CP027942|CRT matches to position: 2816306-2816323, mismatch: 2, identity: 0.889

cgacggggtcgactgctg	CRISPR spacer
cgaggggctcgactgctg	Protospacer
*** *** **********

7. spacer 7.3|2481261|18|NZ_CP027942|CRT matches to position: 3048665-3048682, mismatch: 2, identity: 0.889

cgacggggtcgactgctg	CRISPR spacer
cgacggggtctcctgctg	Protospacer
**********  ******

8. spacer 7.3|2481261|18|NZ_CP027942|CRT matches to position: 3081201-3081218, mismatch: 2, identity: 0.889

cgacggggtcgactgctg	CRISPR spacer
cgacggggtcgagtcctg	Protospacer
************ * ***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP027942_7	7.1\|2481168\|21\|NZ_CP027942\|CRT	2481168-2481188	21	NZ_CP034813	Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence	47031-47051	1	0.952
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP016082	Streptomyces sp. SAT1 plasmid unnamed2, complete sequence	12548-12574	3	0.889
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	314925-314951	4	0.852
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1680763-1680789	4	0.852
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	212590-212616	4	0.852
NZ_CP027942_6	6.1\|2469882\|27\|NZ_CP027942\|CRISPRCasFinder	2469882-2469908	27	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	109462-109488	5	0.815
NZ_CP027942_6	6.1\|2469882\|27\|NZ_CP027942\|CRISPRCasFinder	2469882-2469908	27	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	119953-119979	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP051543	Paracoccus sanguinis strain OM2164 plasmid pPspOM122, complete sequence	43202-43228	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP014514	Frondihabitans sp. PAMC 28766 strain SR6 plasmid 1, complete sequence	202854-202880	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	410726-410752	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1053055-1053081	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1057735-1057761	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	285026-285052	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	272636-272662	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_012853	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence	231996-232022	5	0.815
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP016082	Streptomyces sp. SAT1 plasmid unnamed2, complete sequence	340680-340706	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	727194-727220	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1890784-1890810	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1833726-1833752	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1903954-1903980	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1975638-1975664	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1928916-1928942	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	742936-742962	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	2027914-2027940	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1968479-1968505	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	2001128-2001154	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1833880-1833906	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	68200-68226	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1616503-1616529	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	186894-186920	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	98790-98816	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	524412-524438	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1903724-1903750	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	503549-503575	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	935545-935571	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	400882-400908	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1976787-1976813	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	493583-493609	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1686420-1686446	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1911385-1911411	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	2035005-2035031	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1878974-1879000	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1878976-1879002	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1907411-1907437	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1979607-1979633	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1833377-1833403	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1180313-1180339	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1844402-1844428	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1907593-1907619	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1988255-1988281	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1979574-1979600	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1883594-1883620	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1961164-1961190	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1978317-1978343	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1833321-1833347	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	2001155-2001181	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1883289-1883315	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1883906-1883932	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1961164-1961190	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	186629-186655	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1978416-1978442	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1883594-1883620	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1883938-1883964	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1882797-1882823	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1961164-1961190	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1961164-1961190	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1961164-1961190	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1978412-1978438	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	2040116-2040142	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1978401-1978427	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1883314-1883340	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1894364-1894390	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1874998-1875024	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1937590-1937616	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1966016-1966042	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1958479-1958505	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1978401-1978427	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1883314-1883340	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1883905-1883931	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1926232-1926258	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1979397-1979423	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1883314-1883340	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1883314-1883340	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1978412-1978438	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1961169-1961195	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	2038101-2038127	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1978423-1978449	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1978224-1978250	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	2038101-2038127	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1542931-1542957	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1750437-1750463	6	0.778
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	343566-343592	6	0.778
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	10548-10577	6	0.8
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	626047-626076	6	0.8
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP009294	Novosphingobium pentaromativorans US6-1 plasmid pLA1, complete sequence	175485-175511	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1778156-1778182	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1778199-1778225	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_008308	Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence	193335-193361	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1778154-1778180	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	319688-319714	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	300026-300052	7	0.741
NZ_CP027942_6	6.2\|2469932\|27\|NZ_CP027942\|CRISPRCasFinder	2469932-2469958	27	NC_022235	Sphingomonas sp. ERG5 plasmid pCADAB1, complete sequence	69946-69972	7	0.741
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	MT723944	Mycobacterium phage ChaylaJr, complete genome	152294-152323	7	0.767
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	MK359350	Mycobacterium phage Nidhogg, complete genome	153624-153653	7	0.767
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	NC_023696	Mycobacterium phage Dandelion, complete genome	154850-154879	7	0.767
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	MK359359	Mycobacterium phage Colt, complete genome	155244-155273	7	0.767
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	976094-976123	8	0.733
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1215774-1215803	8	0.733
NZ_CP027942_7	7.2\|2481210\|30\|NZ_CP027942\|CRT	2481210-2481239	30	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	67869-67898	8	0.733

1. spacer 7.1|2481168|21|NZ_CP027942|CRT matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.952

ctggccgtagccggcctgctg	CRISPR spacer
ctggccgtggccggcctgctg	Protospacer
********.************

2. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.889

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gcgaccggatcggccgcaagcgcaccc	Protospacer
******. ******************

3. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
agcaccacatcggccgcaagcgcaacg	Protospacer
.  ********************* **

4. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.852

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gcgaccgcatcgggcgcaagcgcacgc	Protospacer
******.****** ***********

5. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.852

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gcgaccacatcgcccgcaagcgccgca	Protospacer
************ **********  *.

6. spacer 6.1|2469882|27|NZ_CP027942|CRISPRCasFinder matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 5, identity: 0.815

acgattgcggcgtcgggaaccgcacct	CRISPR spacer
gccattgcggcgtcgggaaccgctcgg	Protospacer
.* ******************** *

7. spacer 6.1|2469882|27|NZ_CP027942|CRISPRCasFinder matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 5, identity: 0.815

acgattgcggcgtcgggaaccgcacct	CRISPR spacer
gccattgcggcgtcgggaaccgctcgg	Protospacer
.* ******************** *

8. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP051543 (Paracoccus sanguinis strain OM2164 plasmid pPspOM122, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
tcggccacatcggccgcaagcgccgtg	Protospacer
 **.*******************  .*

9. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP014514 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gcgaccggatcggccgcaagcgcgtct	Protospacer
******. ***************..*

10. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ggcaccacatcggccgccggcgcaccc	Protospacer
*  ************** .*******

11. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gtgaccgcattggccgcaagcgcacgc	Protospacer
*.****.***.**************

12. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gtgaccgcattggccgcaagcgcacgc	Protospacer
*.****.***.**************

13. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gagaccatatcggccgcaagcgctgct	Protospacer
* *****.***************  *

14. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ggcaccacatcggccgccggcgcaccc	Protospacer
*  ************** .*******

15. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_012853 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence) position: , mismatch: 5, identity: 0.815

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gggaccgcatcggccgcaagcgcggtg	Protospacer
* ****.****************. .*

16. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
gcgaccgcatcggccgcaggcgcctgc	Protospacer
******.***********.**** .

17. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

18. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

19. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

20. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

21. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

22. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

23. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

24. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

25. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

26. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

27. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

28. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

29. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

30. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

31. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

32. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

33. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

34. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

35. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

36. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

37. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

38. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

39. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

40. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

41. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

42. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

43. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

44. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

45. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

46. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

47. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

48. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

49. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

50. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

51. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

52. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

53. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

54. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

55. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

56. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

57. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

58. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

59. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

60. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

61. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

62. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

63. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

64. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

65. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

66. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

67. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

68. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

69. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

70. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

71. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

72. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

73. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

74. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

75. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

76. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

77. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

78. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

79. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

80. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

81. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

82. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

83. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

84. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

85. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

86. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

87. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

88. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

89. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgcgtgc	Protospacer
 *****.****************..

90. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgactacatcggccgcaagcggatga	Protospacer
 ****.**************** *. .

91. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
agatccgcatcggcggcaagcgcaccg	Protospacer
. . **.******* ************

92. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 6, identity: 0.778

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
acgaccacatcggcttcaagcgcaagc	Protospacer
.*************. ********

93. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 6, identity: 0.8

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
gcccggctgcagctgcgcgtacgccagtcc	Protospacer
********** ********** ** .*. *

94. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 6, identity: 0.8

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
gcccggctgctgctgcgcctcggcccggcc	Protospacer
****************** * ***  *  *

95. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP009294 (Novosphingobium pentaromativorans US6-1 plasmid pLA1, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
catcccacatcggccgcgagcgcacgt	Protospacer
    *************.*******

96. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgtgtgc	Protospacer
 *****.***************...

97. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgtgtgc	Protospacer
 *****.***************...

98. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_008308 (Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
cgtcccacatcggccgcgagcgcacgt	Protospacer
    *************.*******

99. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgtgtgc	Protospacer
 *****.***************...

100. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgtgtgc	Protospacer
 *****.***************...

101. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
ccgaccgcatcggccgcaagcgtgtgc	Protospacer
 *****.***************...

102. spacer 6.2|2469932|27|NZ_CP027942|CRISPRCasFinder matches to NC_022235 (Sphingomonas sp. ERG5 plasmid pCADAB1, complete sequence) position: , mismatch: 7, identity: 0.741

gcgaccacatcggccgcaagcgcaccg	CRISPR spacer
catcccacatcggccgcgagcgcacgt	Protospacer
    *************.*******

103. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to MT723944 (Mycobacterium phage ChaylaJr, complete genome) position: , mismatch: 7, identity: 0.767

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
ggactgctgctgctgcgcgagggcgggctg	Protospacer
*  * ************** .*******

104. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to MK359350 (Mycobacterium phage Nidhogg, complete genome) position: , mismatch: 7, identity: 0.767

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
ggactgctgctgctgcgcgagggcgggctg	Protospacer
*  * ************** .*******

105. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to NC_023696 (Mycobacterium phage Dandelion, complete genome) position: , mismatch: 7, identity: 0.767

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
ggactgctgctgctgcgcgagggcgggctg	Protospacer
*  * ************** .*******

106. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to MK359359 (Mycobacterium phage Colt, complete genome) position: , mismatch: 7, identity: 0.767

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
ggactgctgctgctgcgcgagggcgggctg	Protospacer
*  * ************** .*******

107. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.733

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
ggcaacgtgctgctgcgcgaaggcgggctg	Protospacer
* * .  ************ ********

108. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.733

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
cagcggccgctgctgcgcgtcggcggcggt	Protospacer
   ****.************ *****  *.

109. spacer 7.2|2481210|30|NZ_CP027942|CRT matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 8, identity: 0.733

gcccggctgctgctgcgcgtaggcgggcgc	CRISPR spacer
cggccactgctgcggcgcgtaggcgtgcgg	Protospacer
   * .******* *********** ***

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP027942

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection