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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040121 Duncaniella sp. B8 chromosome, complete genome 2 crisprs PD-DExK,RT,WYL,DEDDh 2 0 15 2

Results visualization

1. NZ_CP040121
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040121_1 1672741-1672847 Orphan NA
2 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040121_2 2016100-2016194 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP040121_1 1.2|1672807|17|NZ_CP040121|CRISPRCasFinder 1672807-1672823 17 NZ_CP040121.1 1675584-1675600 1 0.941
NZ_CP040121_2 2.1|2016123|49|NZ_CP040121|CRISPRCasFinder 2016123-2016171 49 NZ_CP040121.1 2014614-2014662 2 0.959

1. spacer 1.2|1672807|17|NZ_CP040121|CRISPRCasFinder matches to position: 1675584-1675600, mismatch: 1, identity: 0.941

gcgtgccgtgggggatc	CRISPR spacer
gcgtgccgtgagggatc	Protospacer
**********.******

2. spacer 2.1|2016123|49|NZ_CP040121|CRISPRCasFinder matches to position: 2014614-2014662, mismatch: 2, identity: 0.959

gaggccattagctgatgcgtaacggcatatgtcccggaggccattagcc	CRISPR spacer
gaggccattagccgaagcgtaacggcatatgtcccggaggccattagcc	Protospacer
************.** *********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4366 : 56399 56 unidentified_phage(22.22%) transposase,terminase,integrase attL 43389:43404|attR 60142:60157
DBSCAN-SWA_2 248445 : 256430 7 Clostridium_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_3 344477 : 374014 43 Mannheimia_phage(20.0%) transposase,tail,terminase NA
DBSCAN-SWA_4 645457 : 691964 44 Bacillus_phage(50.0%) transposase,integrase attL 665373:665418|attR 681674:681719
DBSCAN-SWA_5 777060 : 893572 106 unidentified_phage(11.76%) transposase,tRNA,integrase attL 816704:816730|attR 864882:864897
DBSCAN-SWA_6 911229 : 989319 54 uncultured_virus(20.0%) transposase,protease,integrase attL 981993:982013|attR 997909:997929
DBSCAN-SWA_7 1894303 : 1972106 60 Thermus_phage(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_8 2089542 : 2205440 91 unidentified_phage(16.67%) transposase,integrase,tRNA attL 2180830:2180849|attR 2205536:2205555
DBSCAN-SWA_9 2281176 : 2357548 58 environmental_halophage(12.5%) transposase,tRNA NA
DBSCAN-SWA_10 2519222 : 2586196 48 Enterobacteria_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_11 2832360 : 2868580 36 Moraxella_phage(16.67%) transposase,integrase,tRNA attL 2855964:2856023|attR 2874024:2875449
DBSCAN-SWA_12 2872715 : 2910038 47 unidentified_phage(75.0%) transposase,capsid,integrase attL 2885497:2885511|attR 2916999:2917013
DBSCAN-SWA_13 2922604 : 2951640 25 Staphylococcus_phage(28.57%) transposase,tRNA,integrase attL 2919032:2919047|attR 2951721:2951736
DBSCAN-SWA_14 3109560 : 3173605 49 Orpheovirus(12.5%) transposase,protease,tRNA NA
DBSCAN-SWA_15 3325078 : 3376796 47 Tupanvirus(18.18%) transposase,tail NA
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP040121.1|WP_136408033.1|826587_827025_-|PcfK-like-protein 826587_827025_- 145 aa aa 40 NA NA 777060-893572 NA
NZ_CP040121.1|WP_124076434.1|2361175_2361622_+|PcfK-like-protein 2361175_2361622_+ 148 aa aa 40 NA NA No NA