CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP025838	Streptococcus pneumoniae strain SPN XDR SMC1710-32 chromosome, complete genome	3 crisprs	cas3,DinG,DEDDh	0	1	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP025838_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025838_1

11476-11577

Unclear

Consensus_repeat	Method
GTTGTTTCTTATACAGTTTTTCTTG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP025838_1

>merge|NZ_CP025838|1|11476-11577|CRISPRCasFinder
GTTGTTTCTTATACAGTTTTTCTTGCCTACAGCCTCATGCTCTCGGTCGCCAAACTTCTGAGCGTGGGGCTTTTTGAGTTGTTTCTTATACAGTTTTTTCTT

>NZ_CP025838|1|1|11476-11577|CRISPRCasFinder
GTTGTTTCTTATACAGTTTTTCTTG	CCTACAGCCTCATGCTCTCGGTCGCCAAACTTCTGAGCGTGGGGCTTTTTGA
GTTGTTTCTTATACAGTTTTTTCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025838.1\|WP_001218707.1\|16857_17973_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP025838.1\|WP_000131181.1\|14019_15024_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_001003747.1\|10490_10706_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_001234978.1\|22205_22472_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP025838.1\|WP_001107586.1\|12914_13871_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP025838.1\|WP_000058847.1\|9878_10220_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000417889.1\|3752_4145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_001812970.1\|10904_11300_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000492143.1\|9610_9886_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000434362.1\|7088_8558_-\|DNA-primase	unknown	unknown	gnl\|CDD\|273716
NZ_CP025838.1\|WP_000704684.1\|15571_16738_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP025838.1\|WP_000424667.1\|11808_12435_-\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226172
NZ_CP025838.1\|WP_000438800.1\|12524_12758_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376540
NZ_CP025838.1\|WP_000258140.1\|18613_22138_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP025838.1\|WP_000122653.1\|10200_10494_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000357940.1\|15023_15476_+\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl\|CDD\|226180
NZ_CP025838.1\|WP_000171245.1\|10707_10908_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000158204.1\|8610_9471_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214926
NZ_CP025838.1\|WP_000163932.1\|18043_18613_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|223271
NZ_CP025838.1\|WP_000187312.1\|4300_4711_-\|DUF1492-domain-containing-protein	unknown	unknown	gnl\|CDD\|311366

Protein	Function_ID	Function_description	E-value
NZ_CP025838.1\|WP_001234978.1\|22205_22472_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.06015e-32
NZ_CP025838.1\|WP_001107586.1\|12914_13871_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.10008e-08
NZ_CP025838.1\|WP_000424667.1\|11808_12435_-\|Rha-family-transcriptional-regulator	gnl\|CDD\|226172	COG3646, COG3646, Uncharacterized phage-encoded protein [Function unknown].	3.14309e-37
NZ_CP025838.1\|WP_000434362.1\|7088_8558_-\|DNA-primase	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	4.85429e-65
NZ_CP025838.1\|WP_000704684.1\|15571_16738_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.91623e-44
NZ_CP025838.1\|WP_000438800.1\|12524_12758_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	1.78307e-08
NZ_CP025838.1\|WP_000258140.1\|18613_22138_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP025838.1\|WP_000158204.1\|8610_9471_-\|hypothetical-protein	gnl\|CDD\|214926	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	2.9188e-17
NZ_CP025838.1\|WP_000357940.1\|15023_15476_+\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	3.22826e-08
NZ_CP025838.1\|WP_001218707.1\|16857_17973_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP025838.1\|WP_000163932.1\|18043_18613_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|223271	COG0193, Pth, Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis].	3.56215e-98
NZ_CP025838.1\|WP_000187312.1\|4300_4711_-\|DUF1492-domain-containing-protein	gnl\|CDD\|311366	pfam07374, DUF1492, Protein of unknown function (DUF1492). This family consists of several hypothetical, highly conserved Streptococcal and related phage proteins of around 100 residues in length. The function of this family is unknown. It appears to be distantly related to pfam08281.	1.18881e-07

>NZ_CP025838.1|WP_001812970.1|10904_11300_-|hypothetical-protein
MQEIGEKNGLSRLSLLASQTKFIKEELSRLLWIELPELNDSHKIEAVSKSTTGMFFHPGIFEMDAMRQAFFKRQAMHFFENEAEQQAYIEHAEKEYLEATITLKDILFNSKNGTQRVNKSCLIEKFEEAMQ
>NZ_CP025838.1|WP_000171245.1|10707_10908_-|hypothetical-protein
MTLDLDNMTQAEFDKQMAEIKERNPNIFQLISDFLDRKVTPEEVDEFLKMERAEQVEYIKNYQARV
>NZ_CP025838.1|WP_001003747.1|10490_10706_-|hypothetical-protein
MNELDISNTQAAVLIVILIGLLLYLNHRDRKKSAQIERENQQTIKTPSEDLNPDYGRYIQLAGVNVWGGME
>NZ_CP025838.1|WP_000122653.1|10200_10494_-|hypothetical-protein
MSYTMNLYPDIEKIPDETYFTKEIFLATCLNNTIRIAVARGVLTSQLLDKETKEVVCKTLDTIIENQKAILQGVASGQITFVNKSKGEEGLDESIRE
>NZ_CP025838.1|WP_000058847.1|9878_10220_-|hypothetical-protein
MSLSENDKRVLRLIKVGAENSITGSEISLTTKLTERTVRDIIKRLVVKHNIPIVGVRCGVFSGYFIPANKGELLDGAKAFYNQVQEESKRLAVLMNSDLESYKETLKEVGGYV
>NZ_CP025838.1|WP_000492143.1|9610_9886_-|hypothetical-protein
MFSLSRESEQDLAHGILEVVERYLEAREKVPPRLTKLINRVELKEELKISDNTLNKWESQGLRRYQPPDDGARIIFYLVDDIRRFMGVENG
>NZ_CP025838.1|WP_000158204.1|8610_9471_-|hypothetical-protein
MTIYEARGFQSNLVYPFDKMEPFQYIERFKPLVVPESADPEEYKRTQAPYCLSGKVMPEKNGSYKRNNSSLIYRDLIFLDYDDIQGTTEDFIEAVSSALFGYSYILYPTIKHSIEKPRFRLVVKSNNVMNEATYKQVVKEIADKIGLPFDMASLTWSQLQGLPVTTGDPATYQKIVEHGLDYPVPKVEPRAKQGTTERYKPRVSGQRSMTMRIIDTLFNGFGDEGGRNVAVTRFVGLLFNKWVDCDLETAYELTKIANSVTVEPLPIEELDRTFSSIARAEYRKRG
>NZ_CP025838.1|WP_000434362.1|7088_8558_-|DNA-primase
MEQEHPPRTMKELENRIFKAGEEWRAEHTETKVNETTGDVTEKVAMPQTFTVAKILSEIVTFTFISKSNIPDYSLLYIYDLDEGIYTASNDLFNLLCKTFDVRIKPREWPQIKLMVRTLAKIRKPLESANLVPVKNGIIDLRTKELLPFSPKYVITSKISTAYHAPKRVPTDREGKTFDDWLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNISALKPAQFGEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEATFKLFNIFSGNYIPNGGNKTKGWYRRIMIVPFNADFNGEKEKPWIKNEFLANKEVLEYALYKAINQEPFTHFIEPKAVKGLLEEYQEDNDYLLSWVKHEYMEKGWHELDVVPVFIVTRSLKHYAEDMGIPKPNVYGAGKETIKHLQQLTPNRYSLRKKRVPSEDFEKLEAWDVDKIKMRTPQHSITKQE
>NZ_CP025838.1|WP_000187312.1|4300_4711_-|DUF1492-domain-containing-protein
MTPEQVKEKLEGVKWINKEIEGLYLELAALESGIIKKQELSNTRVQTSRVNTTENNPISVLKLKEDTLQRIERLNEERMEISRLIDKLANPLERSVLRLFYLNVLDAWQVAEEIDKSKTAVYIIRQKAIEHLANVG
>NZ_CP025838.1|WP_000417889.1|3752_4145_-|hypothetical-protein
MELDKFKTMMNVRERMTYFLRFQRMAGSENQVTIDEEAWKLVLPYRWDLSGEHEKAIREGLEIFAQDINSIENKRARKYFIIHYCYMRKKTMSECVEMAATSSTSYHRYKQIAVLNFARIHQNGELEVYK
>NZ_CP025838.1|WP_000424667.1|11808_12435_-|Rha-family-transcriptional-regulator
MELVYMDGKKEPYTLSSIVAECAEVKHRHLKILLNKHREDFESFGKVQFKISPSESGQNVRDYILNEQQATLLITYLRNTEPVKEFKKNLVKAFFEMREELSKFRMQRALEKPKRKTLHDSIKTWEAKPKHAHSTMNNLLLKAVTDMNAKQLVKSRGGYNGIDSLTSDELEQYQAFEDMVIAMIGLNMSYQEIKAMAFRNKKTRQRSV
>NZ_CP025838.1|WP_000438800.1|12524_12758_-|helix-turn-helix-transcriptional-regulator
MEQWTLKACRVNAGYTLRQVAKKVNKNFQTVSKYEKDSTYIPFELLKELSAIYQVKLDNIFLGDSTKKIELNKRELQ
>NZ_CP025838.1|WP_001107586.1|12914_13871_+|helix-turn-helix-transcriptional-regulator
MAKNSPQDLENREYFSKRLNLLMEQKGVRQIDLHNALDIPKSTITGYVKGKSLPTAGNLQKIADFLNVKKSFLDLRFIDTVSTSTLKELLDNNQREKVFEMFFNKIKEILSFKKDYMNMEYIRGKIAFDQGVLGRVLQSSIINPGIVEIFNGLDLSDISKNNEALLLSKQREAREYAYNNVLTMITNEYITRLINVIEREQALNTSYVHSEISNLINSLNNKIDSYGAVVFEVNEIIEKIGIQDRKILGYCLQRKISSVQNEINDLVHNNTNNSFCVTKNKIFTEKSDIIDTIEFDYYKGIQNRLNDLAEEIREHFSD
>NZ_CP025838.1|WP_000131181.1|14019_15024_+|hypothetical-protein
MTDLTTSQIERQNILNNSLALQKAEEILKVPGFYFEDTFYFTNSQLATFFEVDIRTIERLVEAHKTELTENGYHTLRGEKLAKFKENAFATDTNVGSKVTQLSISSFRTLLNFAMLLTNSDIAKQVRNTLLDIVINVLTEKTGGHVKFINQRDKNYLSTALEEDNARKIFTNAIDKYVSGSNFKYGQLTNEIYKAIFKERASEYKKILKLNKNDNARATMYSEVLIVIASFEKGVAYEIEQKSKSSNQKLTNTDVIEIIQRLANHPMQEPHLMHAREKMASRDLSFRNAKHEKLAEYIRPISEEDFERFIGEQSKSLSEQIDEHRQVFERLRDK
>NZ_CP025838.1|WP_000357940.1|15023_15476_+|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MDKINYFSAEEAILLHDIEVIEKIGGLHGVKDKGRVFSVFEHLQNDDYYPDFETKLTVLVFNTVQFHMFNDGNKRSSIVFGIKFLTINHLDYLIPFFIETMENIVLWVAMGLIDFNFLKEIISSILYYEELTEKVKEKLVQIALAEENNK
>NZ_CP025838.1|WP_000704684.1|15571_16738_+|site-specific-integrase
MKITEYTKKDGSTVYRSSVYLGIDTVTGKKVKTTISGRTKRELKAKALQAQIDFEKGGATVYKAVEIKTYAELVENWLETYCHTVKKSTLMGTKFKIDKYLLPAFGNYRLDKLTPPIIQKQVNQWAKDYNQLGKGFQEYPLLHSLNKRILKYAVSLQAIPFNPARDVIVPRRKEKEGQKLKYLDDDNLKKFLTYLEQLPNTYKNFYDTVLYKTLLATGLRIRECLALKWSDIDLKNGTLDVNKTLNIIKEITGPKTKSSIRVIDLDNKTVLMLRLYKARQSQIGKEMGLTYEKVFSNSFDKHIDARMLSFRLVKHLERAGCPRFTFHAFRHTHASILLNAGLPYKEIQIRLGHAKLSMTMDIYSHLSKDNQKNATSFYEKAIEKLKSS
>NZ_CP025838.1|WP_001218707.1|16857_17973_+|redox-regulated-ATPase-YchF
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPLADIDTINLELILADLESVNKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTDEEQKVVKGLFLLTTKPVLYVANVDEDVVSEPDSIDYVKQIREFAATENAEVVVISARAEEEISELDDEDKKEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQAAGIIHSDFEKGFIRAVTMSYEDLVKYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV
>NZ_CP025838.1|WP_000163932.1|18043_18613_+|aminoacyl-tRNA-hydrolase
MTKLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQHIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVNYYLQEKNFEKTMQRYNG
>NZ_CP025838.1|WP_000258140.1|18613_22138_+|transcription-repair-coupling-factor
MVTLLDLLSENDQIKKWHQNLTDKKRQLILGLSTSTKALAIASSLEKEDRIVLLTSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLTDSSKKGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKDYQRGQSALEKQISKTLSPILKSYLEEILSSFHQKQSHADSRKFLSLCYDKTWTVFDYIEKDTPIFFDDYQKLMNQYEVFERELAQYFTEELQNSKAFSDMQYFSDIEQIYKKQSPVTFFSNLQKGLGNLKFDKIYQFNQYPMQEFFNQFSFLKEEIERYKKMDYTIILQSSNSMGSKTLEDMLEEYQIKLDSRDKTSICKESVNLIEGNLRHGFHFVDEKILLITEHEIFQKKLKRRFRRQHVSNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNGNANANTRTKGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKRKDNKITIQFEKVTQRLFLAQDYFKALSVTNLKAGIAENKGLMELVFDVQNKKDYEILEGLLIFGESLLEIKEFKEENSI
>NZ_CP025838.1|WP_001234978.1|22205_22472_+|RNA-binding-S4-domain-containing-protein
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIISETRVEENV

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP025838_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025838_2

113197-113292

Orphan

Consensus_repeat	Method
AATGTGTAAGATTTTTATATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025838_2

>merge|NZ_CP025838|2|113197-113292|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAATTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGAAATGTGTAAAATTTTTATATATAA

>NZ_CP025838|2|2|113197-113292|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAA	TTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGA
AATGTGTAAAATTTTTATATATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025838.1\|WP_000198691.1\|112272_112866_-\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|227053
NZ_CP025838.1\|WP_000500040.1\|118862_119735_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP025838.1\|WP_001809441.1\|103685_103907_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000714582.1\|104225_105155_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP025838.1\|WP_000808471.1\|110242_111307_-\|membrane-protein	unknown	unknown	gnl\|CDD\|374284
NZ_CP025838.1\|WP_001108834.1\|122553_123141_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_001030032.1\|108096_109083_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NZ_CP025838.1\|WP_000273864.1\|112852_113179_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP025838.1\|WP_001075102.1\|105168_106092_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP025838.1\|WP_000800431.1\|106349_107825_+\|DUF3502-domain-containing-protein	unknown	unknown	gnl\|CDD\|378792
NZ_CP025838.1\|WP_162797805.1\|117676_118159_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_001140347.1\|109204_110065_+\|DUF4299-domain-containing-protein	unknown	unknown	gnl\|CDD\|339103
NZ_CP025838.1\|WP_001233691.1\|111368_112280_-\|DUF4097-domain-containing-protein	unknown	unknown	gnl\|CDD\|372574
NZ_CP025838.1\|WP_000838912.1\|119743_120415_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NZ_CP025838.1\|WP_000200893.1\|118208_118841_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NZ_CP025838.1\|WP_000096189.1\|114541_115699_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133016
NZ_CP025838.1\|WP_050233580.1\|113317_114484_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|225365
NZ_CP025838.1\|WP_001035700.1\|115740_117591_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP025838.1\|WP_100910943.1\|121356_122220_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP025838.1\|WP_020902660.1\|120654_121305_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030

Protein	Function_ID	Function_description	E-value
NZ_CP025838.1\|WP_000198691.1\|112272_112866_-\|DUF1700-domain-containing-protein	gnl\|CDD\|227053	COG4709, COG4709, Predicted membrane protein [Function unknown].	7.70935e-64
NZ_CP025838.1\|WP_000500040.1\|118862_119735_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.44295e-105
NZ_CP025838.1\|WP_000714582.1\|104225_105155_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	3.01638e-143
NZ_CP025838.1\|WP_000808471.1\|110242_111307_-\|membrane-protein	gnl\|CDD\|374284	pfam16001, DUF4775, Domain of unknown function (DUF4775). This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 308 and 484 amino acids in length.	0.000306874
NZ_CP025838.1\|WP_001030032.1\|108096_109083_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	0
NZ_CP025838.1\|WP_000273864.1\|112852_113179_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.12912e-19
NZ_CP025838.1\|WP_001075102.1\|105168_106092_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.04007e-69
NZ_CP025838.1\|WP_000800431.1\|106349_107825_+\|DUF3502-domain-containing-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	4.04957e-44
NZ_CP025838.1\|WP_001140347.1\|109204_110065_+\|DUF4299-domain-containing-protein	gnl\|CDD\|339103	pfam14132, DUF4299, Domain of unknown function (DUF4299). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 275 and 313 amino acids in length. There are two conserved sequence motifs: RGF and DAY. There are two completely conserved residues (P and D) that may be functionally important.	6.60514e-120
NZ_CP025838.1\|WP_001233691.1\|111368_112280_-\|DUF4097-domain-containing-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	1.41713e-39
NZ_CP025838.1\|WP_000838912.1\|119743_120415_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.1908e-89
NZ_CP025838.1\|WP_000200893.1\|118208_118841_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.0375e-97
NZ_CP025838.1\|WP_000096189.1\|114541_115699_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	3.88139e-109
NZ_CP025838.1\|WP_050233580.1\|113317_114484_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|225365	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism].	1.0335e-125
NZ_CP025838.1\|WP_001035700.1\|115740_117591_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP025838.1\|WP_100910943.1\|121356_122220_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.15823e-10
NZ_CP025838.1\|WP_020902660.1\|120654_121305_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	6.24547e-15

>NZ_CP025838.1|WP_000273864.1|112852_113179_-|PadR-family-transcriptional-regulator
MYFPTSSALIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQGRMRKYYSLTNGGIEQLLTLKDEWTLYTDTINGIIEGSIRHDKN
>NZ_CP025838.1|WP_000198691.1|112272_112866_-|DUF1700-domain-containing-protein
MTRTEYLTQLELYLKKLPEADRIEAMDYFRELFDDAGVEGEEELIASLGTPKEAAHEVLSNLLDKKINEAPAQKNNRQILHIALLALLAAPIGIPLGIAILVTLFAILVAALTVILAFFAVSILGIIGGFLFLVESFTVLAQAKSAFILIFGSGLLAIGASSLVLLGISYVARFFGLLIVRLVQFVLKKGKRGNQHA
>NZ_CP025838.1|WP_001233691.1|111368_112280_-|DUF4097-domain-containing-protein
MRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHTLTITDSFDDQIHISYHPSLSAHHDFITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILRLPKGRTLKGINISANRGQTTIINASLENATLNTNSYILRIEGSRIKNSKLTTPNIVNIFDTVLTDSQLESTDNHFHAENIQVHGKVELTAKDYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
>NZ_CP025838.1|WP_000808471.1|110242_111307_-|membrane-protein
MKQEWFESNDFVKTTSKNKPEEQAQEVSDKAEETIADFDTPIGKNTQVEEEVSQAEVELESQQEEKIETPEVGEARTEIEEKKASNSTEEESDLSKETEKVTIAEESQEALPQQKATTKEPLLISKSLESPYIPDQAPKSRDKWKEQVLDFWSWLVEAIKSPTSKLETSITHSYTAFLLLILFSASSFFFSIYHIKHAYYGHIASINSRFPEQLAPLTLFSIVSILVATTLFFFSFLLGSFVVRRFIHQEKDWTLDKVLQQYSQLLAIPIFLTAIASFFAFFDSLRFTALLCVISIGIILLASLHIITRPSQASETDSFYQLFLSVLVNGVIILLFFVAEVALIGDYLRILAFL
>NZ_CP025838.1|WP_001140347.1|109204_110065_+|DUF4299-domain-containing-protein
MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPEDYEAIARLDYAKFLEVLPLSFYHQLDANQIEVQPILDKDFKALAQEE
>NZ_CP025838.1|WP_001030032.1|108096_109083_+|rhodanese-related-sulfurtransferase
MAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEELWFKIDEESEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
>NZ_CP025838.1|WP_000800431.1|106349_107825_+|DUF3502-domain-containing-protein
MKNWKKYAFTSASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
>NZ_CP025838.1|WP_001075102.1|105168_106092_+|carbohydrate-ABC-transporter-permease
MAKKKIKKEKIDNVGIHSFSKKADIFFSIISGLIALSCILPFVFVIIISVTDEKSLLQYGYSFFPSQFGLDGFEFLAQFKDKILQALFISVFVTVVGTLTNVFITTTYAYAISRTTFKYRRFFTIFVLLSMLFNAGLVPGYIMVTRVLQLGDTVWALIVPMLLSPFNIILMRSFFKKTIPEAILESARIDGASEARIFFQICLPLSLPGIATITLLTALGFWNDWFNALLYIKSDNLYPLQYLLMQIQQNMDYIAKAVGLTGQLGVALPKETGRMAMVVVATLPIAILYPFFQRYFVKGLTIGGVKE
>NZ_CP025838.1|WP_000714582.1|104225_105155_+|sugar-ABC-transporter-permease
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>NZ_CP025838.1|WP_001809441.1|103685_103907_+|hypothetical-protein
MSLQIKLKKLAKELSKLLKDSNLETVDKDVLENSQKELQKAVLFLADEKGSEHTEAEVIDNLKEVIAKLKANA
>NZ_CP025838.1|WP_050233580.1|113317_114484_-|CynX/NimT-family-MFS-transporter
MKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPFSSQLAQKIGLEHLFTYSLFFLTIGSLIRLINLPLLYLGTLMVGASVAVINVLLPSLIQANQPKKIGFLTTLYVTSMGIAAALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRLAPQTKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTVMTWLPTMSIHAGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVVGISMLFFPINNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPAVAALLLIDILMTVALFTVDRADKIL
>NZ_CP025838.1|WP_000096189.1|114541_115699_+|glycosyltransferase-family-2-protein
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKENIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIRYSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGFGTIVGLIRGFKWKKEYKGTIIYLDKISQINQNML
>NZ_CP025838.1|WP_001035700.1|115740_117591_+|polysaccharide-biosynthesis-protein
MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFANQTTHIE
>NZ_CP025838.1|WP_162797805.1|117676_118159_-|hypothetical-protein
MKIKEQTRKLAAGCSKHCFKVVDRTDEVSSKHCFKVVDGTDEVSSKHCFEVVDRTDEVSSKHCFEVVDRTDEVSSKHCFEVVDRTDEVSSKHCFEVVDRTDEVSSKHCFEVVDRTDEVSSKHCFEVVDRTDEVSSKHCFEVVDRTDEVSNHIRQGDVDVI
>NZ_CP025838.1|WP_000200893.1|118208_118841_-|HAD-family-hydrolase
MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKNTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
>NZ_CP025838.1|WP_000500040.1|118862_119735_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIKNEKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
>NZ_CP025838.1|WP_000838912.1|119743_120415_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
>NZ_CP025838.1|WP_020902660.1|120654_121305_+|LysM-peptidoglycan-binding-domain-containing-protein
MKSTTKKIKTTLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHMIYVGQELVIDGPVAPAATPAPTTYAAPAAQDETVSAPAAETTEVAEEAAPVASTPAAEETVATAETSAPAATVSGSEAEAKEWIAQKESGGSYTATNGQYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYGSWSAAKNFWLNNGWY
>NZ_CP025838.1|WP_100910943.1|121356_122220_-|helix-turn-helix-transcriptional-regulator
MRYDFGKVYKEIRESKGLTQEEVCGDVLSRTSLSKIESGKVTPKYENMEFLLRQINMSFEEFDYICHIYQPSQRTEIMQTYLNMNSIIGGSGLVHFFETCQNYLKTHHDLPIEEIRDMLEVVIHIRQHGTEQLSDQVKQTVKKLWEKIEKQDTWYESDLKILNTILFSFPIEHLHLITGKILQRLEVYKNYQHLYDLRMAILLNLSTIYLYHQDKNMCQQICYTLLEDAKNKKSYDMLAICYVRIGICRDDAKLIQKGLSLLELTDETSILAYLKKEVEIYYQPKER
>NZ_CP025838.1|WP_001108834.1|122553_123141_+|hypothetical-protein
MNYNVKYLLSGIFIIVFIGFLVWMRYFNQKKEEEHSDVSFEARLDSEVKTLYKQLGLGEEPHYFLAYRYLHPWFNLAILPPTVEIFLTKIALVMVTPDELLIRNLGNGMTFTSEHHRDLRQGLIRIPKSEMKEFEIRNWKRVFIFGDFLTIKTSQHSYYLQVRDDGLQKGSLSTKHFSDLKRQDFLGLLTDKRTF

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Crispr_ID: NZ_CP025838_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP025838_3

1608900-1608983

Orphan

Consensus_repeat	Method
CTTTTTTGAAACGTTTCATTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP025838_3

>merge|NZ_CP025838|3|1608900-1608983|CRISPRCasFinder
CTTTTTTGAAACGTTTCATTTTTTTCTAGAAAAGATAGCGCTTGGCGCTGTCTTTTTATTTCTTTTTTGAAACGTTTCATTTTT

>NZ_CP025838|3|3|1608900-1608983|CRISPRCasFinder
CTTTTTTGAAACGTTTCATTTTT	TTCTAGAAAAGATAGCGCTTGGCGCTGTCTTTTTATTT
CTTTTTTGAAACGTTTCATTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP025838.1\|WP_000669745.1\|1605426_1607043_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270299
NZ_CP025838.1\|WP_000961810.1\|1600624_1601077_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP025838.1\|WP_001809002.1\|1612286_1612451_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP025838.1\|WP_000502554.1\|1604097_1605417_-\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NZ_CP025838.1\|WP_000782431.1\|1616205_1617054_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|335469
NZ_CP025838.1\|WP_000257097.1\|1599863_1600334_-\|DUF3013-family-protein	unknown	unknown	gnl\|CDD\|337951
NZ_CP025838.1\|WP_001084979.1\|1607972_1608890_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP025838.1\|WP_000455066.1\|1613112_1613283_+\|DUF2273-domain-containing-protein	unknown	unknown	gnl\|CDD\|227834
NZ_CP025838.1\|WP_000030213.1\|1612534_1613101_+\|alkaline-shock-response-membrane-anchor-protein-AmaP	unknown	unknown	gnl\|CDD\|380217
NZ_CP025838.1\|WP_000797961.1\|1607071_1607962_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP025838.1\|WP_000229332.1\|1615420_1616191_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP025838.1\|WP_001132283.1\|1601113_1601293_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP025838.1\|WP_000064115.1\|1613321_1613930_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP025838.1\|WP_001205280.1\|1610402_1611884_-\|aspartate-aminotransferase	unknown	unknown	gnl\|CDD\|285470
NZ_CP025838.1\|WP_001809903.1\|1601429_1601609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_000230204.1\|1609039_1610041_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP025838.1\|WP_000818079.1\|1601773_1602013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP025838.1\|WP_001812322.1\|1614855_1615143_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP025838.1\|WP_000109957.1\|1613960_1614164_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_CP025838.1\|WP_001113216.1\|1602282_1603554_+\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355

Protein	Function_ID	Function_description	E-value
NZ_CP025838.1\|WP_000669745.1\|1605426_1607043_-\|extracellular-solute-binding-protein	gnl\|CDD\|270299	cd13581, PBP2_AlgQ_like_2, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	0
NZ_CP025838.1\|WP_000961810.1\|1600624_1601077_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.2282e-11
NZ_CP025838.1\|WP_001809002.1\|1612286_1612451_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	6.92661e-06
NZ_CP025838.1\|WP_000502554.1\|1604097_1605417_-\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	6.65864e-177
NZ_CP025838.1\|WP_000782431.1\|1616205_1617054_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	2.99285e-66
NZ_CP025838.1\|WP_000257097.1\|1599863_1600334_-\|DUF3013-family-protein	gnl\|CDD\|337951	pfam11217, DUF3013, Protein of unknown function (DUF3013). This bacterial family of proteins with unknown function appear to be restricted to Firmicutes.	1.46969e-66
NZ_CP025838.1\|WP_001084979.1\|1607972_1608890_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.73729e-138
NZ_CP025838.1\|WP_000455066.1\|1613112_1613283_+\|DUF2273-domain-containing-protein	gnl\|CDD\|227834	COG5547, COG5547, Small integral membrane protein [Function unknown].	9.45975e-16
NZ_CP025838.1\|WP_000030213.1\|1612534_1613101_+\|alkaline-shock-response-membrane-anchor-protein-AmaP	gnl\|CDD\|380217	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP. The founding member of this family, AmaP (Asp23 membrane anchoring protein), is related to Asp23 through part of its length, but includes a highly hydrophobic N-terminal region that should make it an integral membrane protein. Asp23 (alkaline shock protein of 23 kDa), described in PMID:7864904, is a cytosolic protein in Staphylococcus aureus, strongly induced by a pH shift from 7 to 10, and also recruited to the membrane. AmaP appears to be the partner protein with an integral membrane segment and the ability to anchor Asp23 to the membrane. This model was built to identify full-length homologs of AmaP, while excluding Asp23. Some but not all members of this family score above the cutoffs of Pfam model version PF03780.11, but full-length homologs of Asp23 score considerably higher. Asp23 family members previously were known as DUF322.	7.65552e-46
NZ_CP025838.1\|WP_000797961.1\|1607071_1607962_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.20755e-67
NZ_CP025838.1\|WP_000229332.1\|1615420_1616191_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	4.67193e-17
NZ_CP025838.1\|WP_001132283.1\|1601113_1601293_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	1.01461e-08
NZ_CP025838.1\|WP_001205280.1\|1610402_1611884_-\|aspartate-aminotransferase	gnl\|CDD\|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	1.09342e-73
NZ_CP025838.1\|WP_000064115.1\|1613321_1613930_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	1.35166e-33
NZ_CP025838.1\|WP_000230204.1\|1609039_1610041_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.86275e-99
NZ_CP025838.1\|WP_001812322.1\|1614855_1615143_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.91273e-14
NZ_CP025838.1\|WP_000109957.1\|1613960_1614164_+\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	1.20386e-07
NZ_CP025838.1\|WP_001113216.1\|1602282_1603554_+\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0

>NZ_CP025838.1|WP_001084979.1|1607972_1608890_-|sugar-ABC-transporter-permease
MNSKAKQVSLWERIKKQKLLLLMTVPGLVLTFIFKYIPMYGVLIAFKDYNPLKGILGSDWIGFSEFTKFISSPNFGILLANTLKLSIYGLLLGFLPPIILAIMLNQLLSEKVKKRIQLILYAPNFISVVVIVGMIFLFFSVGGPINNFLSMFGMKADFLTNPDFFRPLYIFSGIWQGMGWASTLYTATLVNVDPALVEAARLDGANIFQRIWHIDIPALKPIMVIQFVLAAGGIMNVGYEKAFLMQTSLNLPTSEIISTYVYKVGLVSGDYSYSTAVGLFNAVINVVLLVAVNQIVKRMNNGEGI
>NZ_CP025838.1|WP_000797961.1|1607071_1607962_-|carbohydrate-ABC-transporter-permease
MKNSIMDTKFDRRILLLNKIIIVFIVLMTLLPLLYIVVASFMDPKVLVSRGISFNPADWTVEGYQRVFSDQSILRGFINSLLYSFGFAALTVLLSVFTAYPLSKKDLVGRRWINYFLIVTMFFGGGLVPTYLLVKELGMLNTPWAIIVPGAVNVWNIILARAYFQGLPEELVEAAVIDGANDLQIFFKIMLPLAKPIMFVLFLYAFVGQWNSYFDAMIYIKDPNLEPLQLVLRKILIQSQPGQDMIGAQAAMNEMKRLAELIKYATIVISSLPLIVMYPFFQKYFDKGIMAGSLKG
>NZ_CP025838.1|WP_000669745.1|1605426_1607043_-|extracellular-solute-binding-protein
MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSPKDPNEKLILQRLEKETGVHIDWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWAKKGVIIPVEDLIDKYMPNLKKILDEKPEYKALMTAPDGHIYSFPWIEELGDGKESIHSVNDMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKFLFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYIAKGHDQKFGVYFTWDKNNVTGSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVNKNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQASNSLKHLPLNGTAPAELRQKTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNDNNYPRVFMTQEDLDKIAHIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN
>NZ_CP025838.1|WP_000502554.1|1604097_1605417_-|glycoside-hydrolase-family-32-protein
MGDKKYTVEKANRFIAENKHLVNTQYKPEEHFSAEIGWINDPNGFVYFRGEYHLFYQFYPYDSVWGPMHWGHAKSKDLVTWEHLPVALAPDQDYDRNGCFSGSAIVKDDRLWLMYTGHIEEKTGVRQVQNMAFSDDGIHFEKIEQNPVATGADLPDELIAADFRDPKLFEKDGRYYSVVATKHKDNVGCIVLLGSDNLVEWQFESIFLKGREHQGFMWECPDYFELDGKDCLIMSPMRYQREGDSYHNINSSLLFTGKVDWGEKRFIPESVQEIDHGQDFYAPQTLLDDQNRRILIAWMQTWGRTLPTHDQEHKWACAMTLPRILRLEDGKLRQFPVKKGQYQIQIDKDCHYHLGNDTDYLEFGYDSNAQQVYIDRSHLIQKILGEEEQDTSRRYVDIEAKELEVVLDKNSIEIFVNQGEASLTATYYLTVPAELSRID
>NZ_CP025838.1|WP_001113216.1|1602282_1603554_+|replication-associated-recombination-protein-A
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRLQEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQIALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHYDVLSALQKSIRGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQRIGFPEARILIANVVIDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQAEDTGKYERALAQRKEAIDRLRKI
>NZ_CP025838.1|WP_000818079.1|1601773_1602013_-|hypothetical-protein
MKREVISNGNDGPSQEILIFTKQIRHWILSDQVISGKRKLFFREDTPKEILDLYENIKSKLDFAYQEVYSNNGLKKYEK
>NZ_CP025838.1|WP_001809903.1|1601429_1601609_-|hypothetical-protein
MNLIFEEYQFVKIGDKKYRVRSGPMIHSTPPQSVLDRDTFTIDYTDDELLDKEAVFTTH
>NZ_CP025838.1|WP_001132283.1|1601113_1601293_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MPMTQKEMVKLLTAHGWIKTRGGKGSHIKMEKQGERPITILHGELNKYTERGIGKQAGL
>NZ_CP025838.1|WP_000961810.1|1600624_1601077_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MLVTYPALFYYDDTDGTEATYFVHFPDFEYSATQGEGISEALAMGSEWLGITVADLIESDGELPQPSDINSLSLIDNDPFKDDEDFVSTYDLDKSFISMVSVDVSEYLGSQEPIKKTLTIPKWADKLGREMGLNFSQTLTDAIADKKVQA
>NZ_CP025838.1|WP_000257097.1|1599863_1600334_-|DUF3013-family-protein
MATYGFLDVLEEELDKNFPFDFEISWDKRNHAVEVSFLLEAQNAAGVEMVDEDGEVSSDDILFEEAVLFYNPAKSTVNAEDYLTVIPYLPKKGFSREFLAYFALFLKDTAEVGLDTLMDFLEDPEAEEFVMEWNQEVFEEGKVGLEEGEFYPYPRY
>NZ_CP025838.1|WP_000230204.1|1609039_1610041_-|LacI-family-transcriptional-regulator
MVEQRKSITMKDVALEAGVSVGTVSRVINKEKGIKEVTLKKVEQAIKTLNYIPDYYARGMKKNRTETIAIIVPSIWHPFFSEFAMHVENEVYKRNNKLLLCSINGTNREQDYLEMLRHNKVDGVVAITYSPIEHYLTSGIPFVSIDRTYSDIAIPCVSSDNDAGGREAAKQLISKGCQHLAFVGGHNTTINETKRRRISFEKYVQEHKIPLSIFDLDETVTDYYGKLESFLEENSSIDGIFTINDFTALDVIEILKKNGKRIPHDVQIIGYDGIKMAGDRDYLLSTIEQPLEEMAKEAVRILFDIIDGKTVNLQTILPVKFVEGKTTKNENKS
>NZ_CP025838.1|WP_001205280.1|1610402_1611884_-|aspartate-aminotransferase
MRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHSSTNGIRIINTDDSDIEMVYHHFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSEKYYFLEWPFENFSSEPLSQLLELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEGVAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQISVKYQIEMENKDNLIWHLHNTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDIKKELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQPKLKVLVMSNFDQYHAKFVAETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLIYLLNAMMFIRLDE
>NZ_CP025838.1|WP_001809002.1|1612286_1612451_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGIIANVFAGLVGAYAGQSLLGSWGPSIAGMALLPSIVGAAIVITVVSFFTGRK
>NZ_CP025838.1|WP_000030213.1|1612534_1613101_+|alkaline-shock-response-membrane-anchor-protein-AmaP
MSKAKKICFIIFCILILTIFLPVLIDYHQVSDLGIHLLSWRQNSVVEFYLARYVFWGTVVLSTLVLLSILVVMFYPKRYLEIQLETKNDTLKLKNSAIEGFVRSLVSDHRLIKNPTVHVNLRKNKCFVHVEGKILPSDNIADRCQIIQNEITNGLKQFFGIERQVKLEVAVKNYQPKPQNKKTVSRVK
>NZ_CP025838.1|WP_000455066.1|1613112_1613283_+|DUF2273-domain-containing-protein
MEWLKQYRYPIIAGLIGVFLACLIVSFGFFKTIFVLILGALGVAAGLYIEKNYIDK
>NZ_CP025838.1|WP_000064115.1|1613321_1613930_+|Asp23/Gls24-family-envelope-stress-response-protein
MSNEKNTNTNVEKKDATVVAHEIKGELTYEDKVIQKIIGLSLENVSGLLGIDGGFFSNLKEKIVNSDDVTSGVNVEVGKTQVAVDLNVIVEYQKNVPALYSEIREIVSSEVAKMTDLEIVEINVNVVDIKTKEQHEADSVSLQDRVSDVAESTGEFTSEQFEKAKSGLGSGFSTVQEKVSEGVEAVKGAANGVVSHENTRVN
>NZ_CP025838.1|WP_000109957.1|1613960_1614164_+|CsbD-family-protein
MSVEEKLNQAKGSIKEGVGKAIGDEKMEKEGAAEKVVSKVKEVAEDAKDAVEGAVEGVKNMLSGDDK
>NZ_CP025838.1|WP_001812322.1|1614855_1615143_+|IS30-family-transposase
MIVSLKTKSRKAKDMAESIQGWLAQFLVNLFKSITFDCGKEFSKWKDISNHHDSESFFANLGCPRQRCLNEHSNRLLRCHDLPKQTDFNEVSQEF
>NZ_CP025838.1|WP_000229332.1|1615420_1616191_-|sulfite-exporter-TauE/SafE-family-protein
MVEIIYFLIIIIASGLGSISGMGGGIIIKPLMDSFGYHSVSDIAFYSSFSVFIMAIISTIKRFSQSKEIKWRLIFTVSFSSVLGGFLGHLIFQVLLSQLSVRLVSIVQMILLFVMLLVSFVLTDFKKTYQFDKIGFYMICGLLLGLISSFLGIGGGPLNVSLLMVFFSISIKEATMYSLAIIFFSQLSHLATIVVVTGLNQYHLAPVPVIFLASICGGVLGTVVSKVLPENWVRYCFKGMLFFVMGMTLYNLFHIL
>NZ_CP025838.1|WP_000782431.1|1616205_1617054_-|formylglycine-generating-enzyme-family-protein
MKMKKIKGGTFMMGTNSEEGFLDDFEGPQVAVSVKDFSIADTPVTNQEFAQFVKETGYKTLAERQEWSFVFILFVPEAEREGYPHPAGTPWWLQVPNACWKHPYGENSNLVGLEDHPVVHVALEDALAFCNWSGMSLPTEAQWEYAARGGRQSEYPWGDTLLEGGYYHANTWQGRFPYENTALDGFIGTAPVYEFLPNDFGLYQMIGNVWEWCRNPRYTLLASFNEDDYELPKYGIQDEEYAIRGGSFLCHCSYCNRYRVAARNGCISTSTSSHLGFRCLKE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448629	Streptococcus satellite phage Javan742, complete genome	5187-5238	0	1.0
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448646	Streptococcus satellite phage Javan758, complete genome	5186-5237	0	1.0
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448432	Streptococcus satellite phage Javan327, complete genome	4489-4540	1	0.981
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448612	Streptococcus satellite phage Javan725, complete genome	3457-3508	3	0.942
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448495	Streptococcus satellite phage Javan434, complete genome	5542-5593	3	0.942
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448410	Streptococcus satellite phage Javan298, complete genome	3649-3700	3	0.942
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448614	Streptococcus satellite phage Javan727, complete genome	7482-7533	4	0.923
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448623	Streptococcus satellite phage Javan736, complete genome	6059-6110	4	0.923
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448630	Streptococcus satellite phage Javan743, complete genome	7931-7982	4	0.923
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448647	Streptococcus satellite phage Javan759, complete genome	10291-10342	5	0.904
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448643	Streptococcus satellite phage Javan755, complete genome	6646-6697	5	0.904
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448649	Streptococcus satellite phage Javan760, complete genome	4331-4382	5	0.904
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448616	Streptococcus satellite phage Javan729, complete genome	8547-8598	5	0.904
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448627	Streptococcus satellite phage Javan740, complete genome	7031-7082	5	0.904
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	KT337367	Streptococcus phage phiARI0826b, partial genome	32391-32442	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	KT337369	Streptococcus phage phiARI0831b, partial genome	29445-29496	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	FR671407	Streptococcus phage 34117	36073-36124	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	NC_024361	Streptococcus phage DCC1738, complete sequence	36829-36880	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	NC_024357	Streptococcus phage K13, complete sequence	37797-37848	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448640	Streptococcus satellite phage Javan752, complete genome	3884-3935	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448634	Streptococcus satellite phage Javan747, complete genome	2570-2621	7	0.865
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448986	Streptococcus phage Javan570, complete genome	1517-1568	8	0.846
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448455	Streptococcus satellite phage Javan364, complete genome	3323-3374	8	0.846
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448445	Streptococcus satellite phage Javan344, complete genome	5150-5201	9	0.827
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448555	Streptococcus satellite phage Javan592, complete genome	3565-3616	11	0.788
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448547	Streptococcus satellite phage Javan572, complete genome	3566-3617	11	0.788
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448535	Streptococcus satellite phage Javan550, complete genome	3566-3617	11	0.788
NZ_CP025838_1	1.1\|11501\|52\|NZ_CP025838\|CRISPRCasFinder	11501-11552	52	MK448544	Streptococcus satellite phage Javan564, complete genome	2943-2994	11	0.788

1. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448629 (Streptococcus satellite phage Javan742, complete genome) position: , mismatch: 0, identity: 1.0

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	Protospacer
****************************************************

2. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448646 (Streptococcus satellite phage Javan758, complete genome) position: , mismatch: 0, identity: 1.0

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	Protospacer
****************************************************

3. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448432 (Streptococcus satellite phage Javan327, complete genome) position: , mismatch: 1, identity: 0.981

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
cctacagcctcacgctctcggtcgccaaacttctgagcgtggggctttttga	Protospacer
************.***************************************

4. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448612 (Streptococcus satellite phage Javan725, complete genome) position: , mismatch: 3, identity: 0.942

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
tctacagcctcatgctctcggtcgccaaatttctgaacgtggggctttttga	Protospacer
.****************************.******.***************

5. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448495 (Streptococcus satellite phage Javan434, complete genome) position: , mismatch: 3, identity: 0.942

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
cctacagcctcatgctctcggtcgccaaatttctgagcatggggctttttaa	Protospacer
*****************************.********.***********.*

6. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448410 (Streptococcus satellite phage Javan298, complete genome) position: , mismatch: 3, identity: 0.942

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
cctacagcctcatgctctcggtcgccaaatttctgagcatggggctttttaa	Protospacer
*****************************.********.***********.*

7. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448614 (Streptococcus satellite phage Javan727, complete genome) position: , mismatch: 4, identity: 0.923

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcacgctctcggtcgccaaacttctgagcgtggggctttttga	Protospacer
 ..*** ******.***************************************

8. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448623 (Streptococcus satellite phage Javan736, complete genome) position: , mismatch: 4, identity: 0.923

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcatgctctcggtcgccaaacttctgagcgtgggtctttttga	Protospacer
 ..*** ************************************* ********

9. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448630 (Streptococcus satellite phage Javan743, complete genome) position: , mismatch: 4, identity: 0.923

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcacgctctcggtcgccaaacttctgagcgtggggctttttga	Protospacer
 ..*** ******.***************************************

10. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448647 (Streptococcus satellite phage Javan759, complete genome) position: , mismatch: 5, identity: 0.904

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcatgctctcggtcgccaaacttctgagcgtggggcttttttg	Protospacer
 ..*** ******************************************** .

11. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448643 (Streptococcus satellite phage Javan755, complete genome) position: , mismatch: 5, identity: 0.904

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcatgctctcggtcgccaaatttctgagcgtgggtctttttga	Protospacer
 ..*** ***********************.************* ********

12. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448649 (Streptococcus satellite phage Javan760, complete genome) position: , mismatch: 5, identity: 0.904

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-ccacatgcctcacgctctcggtcgccaaacttctgagcgtggggctttttac	Protospacer
 *.*** ******.*************************************.

13. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448616 (Streptococcus satellite phage Javan729, complete genome) position: , mismatch: 5, identity: 0.904

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcatgctctcggtcgccaaatttctgagcgtgggtctttttga	Protospacer
 ..*** ***********************.************* ********

14. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448627 (Streptococcus satellite phage Javan740, complete genome) position: , mismatch: 5, identity: 0.904

cctaca-gcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
-tcacatgcctcacgctctcggtcgccaaacttctgagcgtgggtctttttga	Protospacer
 ..*** ******.****************************** ********

15. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to KT337367 (Streptococcus phage phiARI0826b, partial genome) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
gtactagcctcatgctctcggtcgccaaacttctgagcgtggggcttttttt	Protospacer
 .  .*********************************************

16. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to KT337369 (Streptococcus phage phiARI0831b, partial genome) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
gtactagcctcatgctctcggtcgccaaacttctgagcgtggggcttttttt	Protospacer
 .  .*********************************************

17. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to FR671407 (Streptococcus phage 34117) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
ctcctagcctcacgctctcggtcgccaaacttctgagcgtggggcttttttg	Protospacer
*.. .*******.************************************* .

18. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to NC_024361 (Streptococcus phage DCC1738, complete sequence) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
ctcctagcctcacgctctcggtcgccaaacttctgagcgtggggcttttttg	Protospacer
*.. .*******.************************************* .

19. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to NC_024357 (Streptococcus phage K13, complete sequence) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
ctcctagcctcacgctctcggtcgccaaacttctgagcgtggggcttttttg	Protospacer
*.. .*******.************************************* .

20. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448640 (Streptococcus satellite phage Javan752, complete genome) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
tcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtctttttga	Protospacer
.*    ***********************.************* ********

21. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448634 (Streptococcus satellite phage Javan747, complete genome) position: , mismatch: 7, identity: 0.865

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
tcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtctttttga	Protospacer
.*    ***********************.************* ********

22. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448986 (Streptococcus phage Javan570, complete genome) position: , mismatch: 8, identity: 0.846

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
tagcttgcctcacgctctcggtcgccaaacttctgagcgtggggctttttta	Protospacer
.   . ******.************************************* *

23. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448455 (Streptococcus satellite phage Javan364, complete genome) position: , mismatch: 8, identity: 0.846

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
tgaagttcctcacgctctcggtcgccaaatttctgagcgtggggctttttga	Protospacer
.  *   *****.****************.**********************

24. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448445 (Streptococcus satellite phage Javan344, complete genome) position: , mismatch: 9, identity: 0.827

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
aggatatcctcacactctcggtcgccaaacttctgagcgtggggcttttttg	Protospacer
   *.* *****..************************************ .

25. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448555 (Streptococcus satellite phage Javan592, complete genome) position: , mismatch: 11, identity: 0.788

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
gtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttggtt	Protospacer
 . *. ******************** **.******************

26. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448547 (Streptococcus satellite phage Javan572, complete genome) position: , mismatch: 11, identity: 0.788

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
gtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttggtt	Protospacer
 . *. ******************** **.******************

27. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448535 (Streptococcus satellite phage Javan550, complete genome) position: , mismatch: 11, identity: 0.788

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
gtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttggtt	Protospacer
 . *. ******************** **.******************

28. spacer 1.1|11501|52|NZ_CP025838|CRISPRCasFinder matches to MK448544 (Streptococcus satellite phage Javan564, complete genome) position: , mismatch: 11, identity: 0.788

cctacagcctcatgctctcggtcgccaaacttctgagcgtggggctttttga	CRISPR spacer
gtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttggtt	Protospacer
 . *. ******************** **.******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7088 : 16738

Streptococcus_phage(55.56%)

integrase

attL 3142:3156|attR 16804:16818

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3142:3156	attL	NA	NA	NA	NA
WP_000434362.1\|7088_8558_-	DNA primase	Q9AZI5	Lactococcus_phage	6.8e-64	34.5
WP_000158204.1\|8610_9471_-	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	6.5e-123	74.5
WP_000492143.1\|9610_9886_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	5.6e-20	56.8
WP_000058847.1\|9878_10220_-	hypothetical protein	NA	NA	NA	NA
WP_000122653.1\|10200_10494_-	hypothetical protein	NA	NA	NA	NA
WP_001003747.1\|10490_10706_-	hypothetical protein	NA	NA	NA	NA
WP_000171245.1\|10707_10908_-	hypothetical protein	NA	NA	NA	NA
WP_001812970.1\|10904_11300_-	hypothetical protein	A7J274	Streptococcus_phage	1.3e-06	34.8
WP_000424667.1\|11808_12435_-	Rha family transcriptional regulator	R9QNB1	Lactococcus_phage	6.1e-30	40.8
WP_000438800.1\|12524_12758_-	helix-turn-helix transcriptional regulator	Q38329	Lactococcus_phage	6.4e-09	50.0
WP_001107586.1\|12914_13871_+	helix-turn-helix transcriptional regulator	A0A060QNS7	Streptococcus_phage	5.5e-14	41.0
WP_000131181.1\|14019_15024_+	hypothetical protein	Q331X4	Clostridium_botulinum_C_phage	3.4e-14	28.9
WP_000357940.1\|15023_15476_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_000704684.1\|15571_16738_+\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	5.9e-103	51.5
16804:16818	attR	NA	NA	NA	NA

DBSCAN-SWA_2

58910 : 70366

Cyanophage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000668299.1\|58910_61064_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.2e-46	28.2
WP_000801603.1\|61076_62426_+	HlyD family secretion protein	NA	NA	NA	NA
WP_000043304.1\|62595_63303_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SE76	Cyanophage	2.7e-42	40.1
WP_000361164.1\|63504_67230_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.6e-37	25.6
WP_000220632.1\|67322_68765_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.7e-55	35.1
WP_000182575.1\|68801_69824_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.2e-64	43.9
WP_000717506.1\|69820_70366_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.4e-24	35.0

DBSCAN-SWA_3

124765 : 156679

Streptococcus_phage(50.0%)

tRNA,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100910945.1\|124765_125050_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_100910946.1\|125104_127213_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000571330.1\|127209_127851_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-23	34.8
WP_001038484.1\|128057_128864_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_001810177.1\|128880_130077_+	argininosuccinate synthase	NA	NA	NA	NA
WP_115259262.1\|131213_132077_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001818085.1\|132542_134762_+	peptidase domain-containing ABC transporter	F2Y302	Organic_Lake_phycodnavirus	1.1e-20	31.9
WP_001096141.1\|134754_135222_+	hypothetical protein	NA	NA	NA	NA
WP_000781019.1\|135218_136571_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_000420335.1\|136718_137024_+\|bacteriocin	SPAR17_0115 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000424408.1\|137357_137711_+	hypothetical protein	NA	NA	NA	NA
WP_162797806.1\|137707_138436_+	hypothetical protein	NA	NA	NA	NA
WP_000989850.1\|138589_138802_+	hypothetical protein	NA	NA	NA	NA
WP_000513492.1\|139280_139526_+	hypothetical protein	NA	NA	NA	NA
WP_001810284.1\|139682_140741_+	hypothetical protein	NA	NA	NA	NA
WP_001810285.1\|141055_142033_+	hypothetical protein	NA	NA	NA	NA
WP_000424473.1\|142409_142784_+\|bacteriocin	SPH_0224 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000511666.1\|142790_142973_+	hypothetical protein	NA	NA	NA	NA
WP_000619777.1\|142991_143894_+	hypothetical protein	NA	NA	NA	NA
WP_000366643.1\|143949_144303_+	hypothetical protein	NA	NA	NA	NA
WP_000072912.1\|144299_145028_+	hypothetical protein	NA	NA	NA	NA
WP_000770312.1\|146160_146400_+	hypothetical protein	M1Q0Z8	Streptococcus_phage	4.0e-14	51.4
WP_001810010.1\|146384_146663_+	hypothetical protein	M1Q0Z8	Streptococcus_phage	1.1e-20	50.5
WP_115259264.1\|146948_149189_+	cell surface protein	NA	NA	NA	NA
WP_001282967.1\|149589_150711_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_050078531.1\|150851_151307_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000220946.1\|151316_153230_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000639577.1\|155288_155522_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_000977347.1\|156339_156492_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	NA	NA	NA	NA
WP_000180803.1\|156493_156679_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	NA	NA	NA	NA

DBSCAN-SWA_4

284176 : 358520

Streptococcus_phage(30.77%)

integrase,holin,protease,transposase

attL 285615:285648|attR 365330:365363

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000530081.1\|284176_285433_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.5e-234	97.1
285615:285648	attL	NA	NA	NA	NA
WP_000886031.1\|285717_286035_-	DUF960 domain-containing protein	NA	NA	NA	NA
WP_001044624.1\|286390_286837_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_000075973.1\|286855_287248_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_162797807.1\|287459_287882_-\|integrase	tyrosine-type recombinase/integrase	A0A0P0I3D2	Lactobacillus_phage	6.0e-05	38.8
WP_078139270.1\|289191_290442_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_000203063.1\|290663_291140_-	glutathione peroxidase	Q70H87	Fowlpox_virus	6.3e-19	33.5
WP_001193713.1\|291362_294566_+	LPXTG-anchored hyaluronate lyase	NA	NA	NA	NA
WP_000167295.1\|295709_296339_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_000161480.1\|296348_297350_-	sugar kinase	NA	NA	NA	NA
WP_000684786.1\|297380_298022_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_000706826.1\|299125_299560_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000592943.1\|299571_300762_+	unsaturated chondroitin disaccharide hydrolase	NA	NA	NA	NA
WP_000178622.1\|300772_301264_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_000026610.1\|301278_302058_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_000148012.1\|302044_302863_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_000381739.1\|302862_303156_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_000657078.1\|303177_305079_+	alginate lyase family protein	NA	NA	NA	NA
WP_000412453.1\|305138_306140_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.1e-07	23.8
WP_000838117.1\|306249_306585_-	hypothetical protein	NA	NA	NA	NA
WP_000711739.1\|306595_306838_-	hypothetical protein	NA	NA	NA	NA
WP_001082474.1\|306853_307048_-	helix-turn-helix transcriptional regulator	A0A142LP09	Marinitoga_camini_virus	7.2e-06	37.1
WP_000159418.1\|307213_308164_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_000818547.1\|308175_308493_+	cell division protein FtsL	NA	NA	NA	NA
WP_100910957.1\|308496_310749_+	PASTA domain-containing protein	NA	NA	NA	NA
WP_100910958.1\|310750_311731_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_054376650.1\|312294_314400_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.0e-116	37.7
WP_000032552.1\|315261_315744_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000743570.1\|315838_317323_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_115259277.1\|317475_319083_+	alpha-glucosidase	NA	NA	NA	NA
WP_001022228.1\|319241_319415_+	S-ribosylhomocysteinase	NA	NA	NA	NA
WP_115259279.1\|320151_321597_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	8.9e-133	59.4
WP_000567604.1\|321598_322330_+	tyrosine protein phosphatase	NA	NA	NA	NA
WP_000392514.1\|322338_323031_+	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	1.6e-63	56.3
WP_001142531.1\|323040_323730_+	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	2.9e-73	62.8
WP_115259281.1\|323744_325112_+	sugar transferase	NA	NA	NA	NA
WP_000686638.1\|325115_325565_+	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA
WP_000578432.1\|325564_326071_+	multidrug MFS transporter	NA	NA	NA	NA
WP_000170479.1\|326063_327263_+	hypothetical protein	NA	NA	NA	NA
WP_000405438.1\|327264_328293_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_000389755.1\|328300_329257_+	glycosyltransferase	A0A1V0SAH6	Catovirus	2.9e-15	36.4
WP_000570495.1\|329272_330181_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_000066241.1\|330185_331649_+	flippase	NA	NA	NA	NA
WP_000261151.1\|332842_333991_+	CDP-glycerol--glycerophosphate glycerophosphotransferase	NA	NA	NA	NA
WP_000794264.1\|334026_335055_+	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_000645464.1\|335070_335775_+\|holin	phosphocholine cytidylyltransferase family protein	NA	NA	NA	NA
WP_000779206.1\|335789_336623_+	HAD-IIA family hydrolase	NA	NA	NA	NA
WP_000842576.1\|337422_339405_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_115259283.1\|339705_345009_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_115259285.1\|345176_347345_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_100910964.1\|347341_347938_-	Holliday junction resolvase RecU	R9TMF8	Paenibacillus_phage	2.6e-22	34.9
WP_000179549.1\|348004_348532_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_000200645.1\|348601_348943_+	cell division regulator GpsB	NA	NA	NA	NA
WP_000711414.1\|349428_350586_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_000039255.1\|350598_351993_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA
WP_000158793.1\|352068_353493_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	2.1e-41	29.6
WP_000518008.1\|353504_354194_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.3e-12	26.1
WP_000771053.1\|354292_355291_+\|holin	choline-binding protein CbpJ	NA	NA	NA	NA
WP_000765684.1\|355408_356641_-	MFS transporter	NA	NA	NA	NA
WP_000619581.1\|358190_358520_+\|transposase	transposase	NA	NA	NA	NA
365330:365363	attR	NA	NA	NA	NA

DBSCAN-SWA_5

416167 : 525182

Bacillus_phage(10.53%)

tRNA,protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_115259293.1\|416167_417304_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000280773.1\|417559_418405_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000904591.1\|418551_419613_-	DNA polymerase IV	I6RSM4	Salmonella_phage	3.6e-14	29.7
WP_000260644.1\|419960_422285_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.3e-114	32.9
WP_001811329.1\|422651_422867_-	hypothetical protein	NA	NA	NA	NA
WP_000384133.1\|423196_423481_-	hypothetical protein	NA	NA	NA	NA
WP_001809505.1\|424092_424263_-\|transposase	transposase	NA	NA	NA	NA
WP_074186948.1\|425022_425280_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA
WP_115259295.1\|425404_426844_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_000691685.1\|426847_428197_-	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_001063601.1\|428384_429233_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA
WP_000403162.1\|429247_429796_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_000693286.1\|429802_430060_+	hypothetical protein	NA	NA	NA	NA
WP_115259297.1\|430161_431844_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.7e-19	34.4
WP_115259299.1\|431828_432659_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000181374.1\|432851_433355_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000185827.1\|433807_434371_+	ECF transporter S component	NA	NA	NA	NA
WP_000678691.1\|434384_435011_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000867289.1\|435037_435427_+	hypothetical protein	NA	NA	NA	NA
WP_000418402.1\|436007_436595_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_000105239.1\|436984_438592_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.0e-141	47.0
WP_000026638.1\|439150_440782_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_115259301.1\|441074_446054_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_001096750.1\|446143_447340_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_000119900.1\|447475_448003_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_000659547.1\|448079_448436_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001122900.1\|448472_449819_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_001808898.1\|449914_450034_-	hypothetical protein	NA	NA	NA	NA
WP_000410533.1\|449998_450148_+	hypothetical protein	NA	NA	NA	NA
WP_000651177.1\|452416_453214_-	tyrosine-type DNA invertase PsrA	A0A0H4TI16	Erysipelothrix_phage	1.3e-21	28.7
WP_000029046.1\|454836_456300_-	SAM-dependent DNA methyltransferase	J7I0U9	Acinetobacter_phage	9.0e-24	24.8
WP_000229097.1\|456312_458646_-	DEAD/DEAH box helicase family protein	Q6NDX2	Leptospira_phage	1.1e-18	25.8
WP_001088694.1\|459250_459760_+	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_000255770.1\|459923_460958_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_000046031.1\|460984_461509_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_000034662.1\|461997_463821_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.3e-133	47.2
WP_000114433.1\|463822_464179_+	hypothetical protein	NA	NA	NA	NA
WP_001810236.1\|464580_465717_+	molecular chaperone DnaJ	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	1.5e-21	27.4
WP_001810235.1\|466050_466290_-	hypothetical protein	NA	NA	NA	NA
WP_000777760.1\|466451_466739_-	hypothetical protein	NA	NA	NA	NA
WP_001278300.1\|466748_467159_-	HIT family protein	B5LJ12	Mycobacterium_phage	3.4e-05	31.6
WP_000889925.1\|467226_467958_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.4e-22	29.5
WP_000653767.1\|467954_469004_+	multidrug ABC transporter permease	NA	NA	NA	NA
WP_000132572.1\|469171_469501_-	hypothetical protein	NA	NA	NA	NA
WP_000682135.1\|469777_470116_+	response regulator transcription factor	NA	NA	NA	NA
WP_001017638.1\|470870_472211_+	sensor histidine kinase	NA	NA	NA	NA
WP_000358817.1\|472252_472408_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA
WP_001069091.1\|472464_473826_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_050237984.1\|476275_476428_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_001093248.1\|476894_477164_+\|bacteriocin	bacteriocin-like peptide BlpJ	NA	NA	NA	NA
WP_000379964.1\|477232_477463_+\|bacteriocin	bacteriocin-like peptide BlpU	NA	NA	NA	NA
WP_000346298.1\|477465_477585_+	hypothetical protein	NA	NA	NA	NA
WP_000846944.1\|478042_478447_+	hypothetical protein	NA	NA	NA	NA
WP_000379879.1\|479498_479753_+\|bacteriocin	two-peptide bacteriocin subunit BlpM	NA	NA	NA	NA
WP_001099492.1\|479768_479972_+\|bacteriocin	two-peptide bacteriocin subunit BlpN	NA	NA	NA	NA
WP_001809846.1\|480215_480365_+\|bacteriocin	bacteriocin-like peptide BlpO	NA	NA	NA	NA
WP_000346296.1\|480468_480588_+	hypothetical protein	NA	NA	NA	NA
WP_000877385.1\|481373_481793_+	hypothetical protein	NA	NA	NA	NA
WP_000760521.1\|481807_482497_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000276498.1\|482538_482772_+	hypothetical protein	NA	NA	NA	NA
WP_001838554.1\|483102_484449_+\|transposase	IS1380-like element ISSpn5 family transposase	A0A1X9I6F6	Streptococcus_phage	2.6e-78	40.2
WP_000638370.1\|484630_485242_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000363002.1\|485402_486197_+	phosphotransferase family protein	NA	NA	NA	NA
WP_001266083.1\|486193_486829_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001808691.1\|486954_487434_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_000032273.1\|487477_488614_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000857562.1\|488635_488929_+	YlxR family protein	NA	NA	NA	NA
WP_001041390.1\|488921_489221_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_000039210.1\|489237_492030_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.3e-19	22.9
WP_001273601.1\|492280_492631_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000840403.1\|492909_493689_+	hypothetical protein	NA	NA	NA	NA
WP_000522937.1\|493690_493873_+	hypothetical protein	NA	NA	NA	NA
WP_000368737.1\|494287_494521_+	DUF1858 domain-containing protein	NA	NA	NA	NA
WP_000752891.1\|494520_495855_+	DUF438 domain-containing protein	NA	NA	NA	NA
WP_000119707.1\|495864_496119_+	DUF1912 family protein	NA	NA	NA	NA
WP_000038619.1\|496214_496610_+	helicase	NA	NA	NA	NA
WP_000124551.1\|497459_498020_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000550021.1\|498019_498598_+	AAA family ATPase	NA	NA	NA	NA
WP_115259303.1\|498590_501242_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.3e-150	40.9
WP_000033775.1\|501311_502067_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_001183267.1\|502349_503153_+	cell division protein Fic	NA	NA	NA	NA
WP_001814445.1\|503268_503487_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.4e-12	60.3
WP_001808922.1\|503450_503756_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	2.7e-15	51.1
WP_001818155.1\|503817_504090_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	5.9e-14	50.6
WP_014632402.1\|504569_504770_+	helicase	NA	NA	NA	NA
WP_000584535.1\|505069_505909_+	PRD domain-containing protein	NA	NA	NA	NA
WP_000120558.1\|505926_507765_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000151838.1\|507777_509193_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_001812918.1\|509784_510831_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.2e-27	33.3
WP_000619941.1\|510830_511340_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000961594.1\|511416_513822_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000597976.1\|513889_514891_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_001814186.1\|515618_515885_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000108220.1\|516145_518395_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_000089975.1\|518458_519325_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_001118979.1\|520009_522223_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_000539953.1\|522238_522856_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_000613675.1\|522867_523752_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000591096.1\|523838_525182_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.2e-46	35.8

DBSCAN-SWA_6

789981 : 851755

Streptococcus_phage(45.83%)

tRNA,protease,transposase,integrase,bacteriocin

attL 793591:793631|attR 846580:846620

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001200062.1\|789981_791196_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_001076703.1\|791330_792155_+	esterase family protein	NA	NA	NA	NA
WP_001108634.1\|792167_793334_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
793591:793631	attL	NA	NA	NA	NA
WP_000627748.1\|793841_795335_+	SAM-dependent DNA methyltransferase	J7I0U9	Acinetobacter_phage	4.0e-35	31.7
WP_050119496.1\|795347_796271_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000260605.1\|796362_796599_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_000158366.1\|796595_797009_+	type II toxin-antitoxin system death-on-curing family toxin	A0A0N9SKD8	Staphylococcus_phage	3.1e-14	38.5
WP_000444455.1\|797126_798092_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	1.4e-33	29.6
WP_000756128.1\|798125_799169_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_000526339.1\|799198_802549_+	DEAD/DEAH box helicase family protein	A0A2I7RGD1	Vibrio_phage	9.6e-13	25.2
WP_001042999.1\|803054_803525_-	arginine repressor	NA	NA	NA	NA
WP_001212055.1\|803541_805815_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_000561506.1\|806160_809262_+	DNA polymerase III subunit alpha	A0A291AWR1	Streptomyces_phage	3.1e-114	32.8
WP_000820852.1\|809344_810352_+	6-phosphofructokinase	NA	NA	NA	NA
WP_001042809.1\|810410_811916_+	pyruvate kinase	NA	NA	NA	NA
WP_001845837.1\|812648_812864_-	S24 family peptidase	Q708R9	Streptococcus_phage	1.1e-15	86.4
WP_000536835.1\|813021_813276_-	phage repressor protein	B3GVX0	Streptococcus_phage	3.3e-19	61.2
WP_000749599.1\|813711_814584_+	DUF4300 family protein	NA	NA	NA	NA
WP_000420565.1\|815216_815528_+	hypothetical protein	NA	NA	NA	NA
WP_000759772.1\|815531_816248_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000530081.1\|816369_817626_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.5e-234	97.1
WP_000617843.1\|817798_818614_-	TIGR03943 family protein	NA	NA	NA	NA
WP_000123614.1\|818610_819516_-	permease	NA	NA	NA	NA
WP_115259328.1\|819972_822102_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_000778587.1\|822088_822538_+	SprT family protein	NA	NA	NA	NA
WP_001085044.1\|822596_822869_+	PspC domain-containing protein	NA	NA	NA	NA
WP_000680767.1\|823222_823414_-	hypothetical protein	NA	NA	NA	NA
WP_000173358.1\|823841_824600_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.7e-27	36.3
WP_000489386.1\|824601_826590_+	ABC transporter permease	NA	NA	NA	NA
WP_001153880.1\|827300_828296_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.4e-33	33.6
WP_000661000.1\|829002_830478_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000366713.1\|831413_832274_+	polyamine aminopropyltransferase	A0A1C9C533	Heterosigma_akashiwo_virus	1.0e-11	30.0
WP_000764369.1\|833528_834656_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
WP_000969445.1\|834652_835738_+	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	1.6e-89	47.5
WP_001246753.1\|835747_836623_+	N-carbamoylputrescine amidase	M1H5W0	Paramecium_bursaria_Chlorella_virus	1.9e-77	50.0
WP_000593568.1\|836803_837613_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_000602449.1\|837884_838106_+\|bacteriocin	SP_0924 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000745380.1\|838159_838831_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001025709.1\|839072_839981_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.1e-06	27.7
WP_000745389.1\|839977_840439_+	signal peptidase II	NA	NA	NA	NA
WP_000403193.1\|840428_841316_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	3.8e-09	27.5
WP_000728291.1\|841318_843202_+	MBL fold metallo-hydrolase	I2E8W4	Clostridium_phage	1.7e-14	25.2
WP_075218898.1\|843281_844412_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-114	58.4
WP_000254687.1\|844421_845684_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.0e-140	64.8
WP_000689700.1\|845687_846485_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	1.1e-60	50.9
WP_000033389.1\|846706_847345_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.7e-75	68.1
846580:846620	attR	NA	NA	NA	NA
WP_000806716.1\|847341_848232_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.4e-72	51.4
WP_000358228.1\|848271_848589_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.9e-28	60.0
WP_001166872.1\|848591_849461_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.8e-115	75.7
WP_115259330.1\|849687_850206_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_000345254.1\|850314_850962_+	replication initiator protein A	A0A2P0VK56	Streptococcus_phage	7.0e-13	33.7
WP_000997256.1\|850950_851755_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1071360 : 1085668

Streptococcus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050197910.1\|1071360_1073829_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	4.6e-105	35.5
WP_000204727.1\|1074022_1075009_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_000731137.1\|1075345_1076041_-	potassium channel family protein	A0A1B0Y2S3	Lactobacillus_phage	5.4e-19	44.0
WP_001809704.1\|1076087_1076342_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5S8E8	Streptococcus_phage	5.3e-17	51.2
WP_000208080.1\|1076343_1076586_-	hypothetical protein	NA	NA	NA	NA
WP_000530078.1\|1076779_1078036_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	6.6e-233	96.7
WP_001289493.1\|1078099_1078909_-	MBL fold metallo-hydrolase	A0A0C5AFC1	Paenibacillus_phage	1.8e-34	39.0
WP_100910888.1\|1078910_1080260_-	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	5.2e-34	34.0
WP_000722076.1\|1080252_1080957_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.8e-39	39.8
WP_115259355.1\|1081012_1082188_-	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	8.8e-22	29.8
WP_000845285.1\|1082515_1084186_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_000699494.1\|1084415_1085105_+	phosphopantothenate--cysteine ligase	Q9HH70	Methanothermobacter_phage	6.5e-17	31.6
WP_001284128.1\|1085116_1085668_+	phosphopantothenoylcysteine decarboxylase	A0A1V0S7W6	Shearwaterpox_virus	3.1e-25	36.1

DBSCAN-SWA_8

1125547 : 1188469

Streptococcus_phage(62.5%)

integrase,holin,protease,transposase

attL 1118394:1118429|attR 1197019:1197054

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1118394:1118429	attL	NA	NA	NA	NA
WP_000811991.1\|1125547_1126351_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	4.0e-10	27.1
WP_001199652.1\|1126352_1127162_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	9.1e-10	30.3
WP_001126409.1\|1127436_1130613_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_000166701.1\|1130925_1132005_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	6.3e-59	35.9
WP_001293838.1\|1132054_1132978_-	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	5.1e-25	31.7
WP_000850024.1\|1132996_1133518_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_000244450.1\|1133752_1134358_-	endonuclease III	NA	NA	NA	NA
WP_000773231.1\|1134357_1134900_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_001861318.1\|1135624_1137184_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2I4R674	Erysipelothrix_phage	3.5e-26	24.8
WP_000895733.1\|1137332_1138232_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_000219823.1\|1138233_1138794_-	LemA family protein	A0A1X9IGG1	Lactococcus_phage	1.1e-11	32.5
WP_000801931.1\|1138887_1139601_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_000863623.1\|1141331_1142903_-	signal recognition particle protein	NA	NA	NA	NA
WP_000402066.1\|1142914_1143247_-	putative DNA-binding protein	NA	NA	NA	NA
WP_001246421.1\|1143337_1143703_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_001003502.1\|1143786_1145091_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	3.4e-30	35.1
WP_000023523.1\|1145103_1145910_+	sugar-phosphatase	NA	NA	NA	NA
WP_001009001.1\|1145952_1146951_+	SAP domain-containing protein	NA	NA	NA	NA
WP_001068669.1\|1147230_1147578_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000237399.1\|1147696_1148026_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	1.4e-09	37.0
WP_000712093.1\|1148019_1148394_-	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_000362445.1\|1148390_1148657_-	chorismate mutase	NA	NA	NA	NA
WP_001162128.1\|1148772_1149216_-	flavodoxin	A7KUZ7	Bacillus_phage	1.6e-08	37.4
WP_000401770.1\|1149319_1150255_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_001808393.1\|1150308_1150593_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_001818242.1\|1150649_1150868_-	hypothetical protein	NA	NA	NA	NA
WP_000199553.1\|1151976_1153323_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_000941984.1\|1156777_1157074_-	hypothetical protein	NA	NA	NA	NA
WP_050273120.1\|1157231_1157519_-	hypothetical protein	NA	NA	NA	NA
WP_000492399.1\|1157801_1158638_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_000227919.1\|1158637_1159228_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
WP_000420682.1\|1159658_1159973_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_000985015.1\|1159988_1160375_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000813488.1\|1160403_1161789_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_001815707.1\|1161965_1163384_+	helix-turn-helix domain-containing protein	A0A1S5SEX3	Streptococcus_phage	1.5e-233	100.0
WP_001860874.1\|1163432_1163516_+	23S rRNA methyltransferase attenuator leader peptide ErmL	NA	NA	NA	NA
WP_001038795.1\|1163640_1164378_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	3.1e-134	99.2
WP_000019067.1\|1164634_1165882_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.9e-12	23.9
WP_001009056.1\|1166061_1166283_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000342539.1\|1166399_1166897_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_000506270.1\|1166871_1167378_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000331160.1\|1167361_1169809_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_100910889.1\|1169811_1171989_+	hypothetical protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	99.9
WP_000769868.1\|1171985_1172987_+	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_100910890.1\|1172983_1173871_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.4e-157	93.9
WP_001814923.1\|1174115_1174232_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000691744.1\|1174247_1176167_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	97.3
WP_000336323.1\|1176285_1176453_+	conjugal transfer protein	D0R0F6	Streptococcus_phage	1.6e-14	68.0
WP_001814874.1\|1177065_1177149_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_001038790.1\|1177273_1178011_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	1.4e-134	99.6
WP_000576156.1\|1178365_1178920_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	2.3e-36	52.1
WP_001240982.1\|1178923_1181842_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.1e-169	36.1
WP_000804885.1\|1182641_1183064_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_000857133.1\|1183060_1183291_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000814511.1\|1183751_1183955_+	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_001291561.1\|1184036_1185254_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
WP_000821309.1\|1185468_1186056_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000840776.1\|1186058_1186292_-	hypothetical protein	NA	NA	NA	NA
WP_000566524.1\|1186304_1186685_-	hypothetical protein	NA	NA	NA	NA
WP_000645887.1\|1186677_1187127_-	hypothetical protein	NA	NA	NA	NA
WP_001210966.1\|1187110_1188469_-	DNA (cytosine-5-)-methyltransferase	A0A141E1L1	Streptococcus_phage	3.9e-130	56.3
1197019:1197054	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1273369 : 1314519

Streptococcus_phage(20.0%)

tRNA,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_115259363.1\|1273369_1273495_-\|transposase	transposase	NA	NA	NA	NA
WP_000484478.1\|1273789_1274095_-\|transposase	transposase	NA	NA	NA	NA
WP_000691853.1\|1274081_1274276_-\|transposase	transposase	NA	NA	NA	NA
WP_001812990.1\|1274472_1274796_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001136122.1\|1274776_1274962_-	hypothetical protein	NA	NA	NA	NA
WP_100910896.1\|1275265_1276828_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.9e-19	32.8
WP_100910897.1\|1276968_1277667_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000071672.1\|1277709_1278606_-	EamA family transporter	NA	NA	NA	NA
WP_000872215.1\|1278614_1279550_-	serine hydrolase	NA	NA	NA	NA
WP_001102211.1\|1279546_1280272_-	proteinase	NA	NA	NA	NA
WP_000290657.1\|1280355_1280991_-\|holin	1-alkyl-2-acetylglycerophosphocholine esterase	A0A2K9L661	Tupanvirus	8.7e-08	28.7
WP_115259366.1\|1280992_1281820_-	HAD family phosphatase	NA	NA	NA	NA
WP_000930004.1\|1282783_1282906_-	hypothetical protein	NA	NA	NA	NA
WP_001272961.1\|1283418_1284030_+	peptide deformylase	E3SLL2	Synechococcus_phage	4.9e-16	42.4
WP_000855753.1\|1284074_1284803_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000272294.1\|1284841_1285753_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	5.9e-90	51.5
WP_000926599.1\|1285818_1286043_-	DUF4059 family protein	NA	NA	NA	NA
WP_000590970.1\|1286120_1286864_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-29	40.5
WP_001103449.1\|1286863_1287664_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000889093.1\|1287821_1288178_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.2e-33	57.3
WP_001170346.1\|1288190_1288703_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.3e-46	55.6
WP_000405832.1\|1288702_1289197_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	1.9e-42	52.1
WP_000858730.1\|1289331_1289778_+	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_001097993.1\|1289774_1290422_+	hemolysin III family protein	NA	NA	NA	NA
WP_000689945.1\|1290442_1291024_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_000138517.1\|1291024_1291900_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_000036789.1\|1292051_1293431_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000175407.1\|1293724_1294648_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_000915944.1\|1294707_1295313_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	5.9e-54	54.2
WP_000673678.1\|1295330_1296575_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	3.8e-55	52.7
WP_000371287.1\|1296670_1296928_-	DUF896 family protein	NA	NA	NA	NA
WP_000164771.1\|1296969_1299006_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_000038736.1\|1299217_1300135_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_000369583.1\|1300502_1301264_-	hypothetical protein	NA	NA	NA	NA
WP_115259368.1\|1301536_1302379_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-51	40.2
WP_162797819.1\|1302493_1303831_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_000915890.1\|1304728_1305706_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000850564.1\|1305702_1306785_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.4e-36	31.0
WP_001040724.1\|1308267_1309464_-	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	7.3e-32	29.6
WP_000348122.1\|1310384_1311254_-	aquaporin family protein	M1H9L8	Acanthocystis_turfacea_Chlorella_virus	4.2e-21	29.6
WP_000248996.1\|1311476_1311998_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_001810000.1\|1311969_1313061_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_000935663.1\|1313171_1313426_-	hypothetical protein	NA	NA	NA	NA
WP_000200307.1\|1313783_1314317_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	8.9e-06	29.5
WP_001809998.1\|1314303_1314519_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1371542 : 1425506

Streptococcus_phage(96.36%)

capsid,tRNA,protease,tail,terminase,integrase,holin

attL 1360173:1360205|attR 1433254:1433286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1360173:1360205	attL	NA	NA	NA	NA
WP_001138805.1\|1371542_1372727_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	6.8e-38	32.6
WP_000027897.1\|1372738_1373506_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_000762061.1\|1373771_1374620_-	DegV family protein	NA	NA	NA	NA
WP_001050086.1\|1374621_1374996_-	DUF1149 family protein	NA	NA	NA	NA
WP_000521418.1\|1375069_1376422_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_000742290.1\|1376445_1377225_-	YbbR-like domain-containing protein	NA	NA	NA	NA
WP_001011058.1\|1377211_1378069_-	TIGR00159 family protein	NA	NA	NA	NA
WP_000081003.1\|1378204_1379173_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.8e-66	100.0
WP_000350525.1\|1379425_1380382_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A1S5SBM2	Streptococcus_phage	1.5e-144	99.4
WP_001186239.1\|1380381_1380717_-\|holin	phage holin	A0A126GGL9	Streptococcus_phage	3.4e-51	99.1
WP_001810279.1\|1380720_1381020_-	hypothetical protein	A0A1S5SC89	Streptococcus_phage	1.4e-45	100.0
WP_000852249.1\|1381029_1381380_-	hypothetical protein	A0A060QMT7	Streptococcus_phage	4.7e-64	100.0
WP_001091119.1\|1381382_1381586_-	hypothetical protein	X2KU40	Streptococcus_phage	1.1e-25	100.0
WP_000068023.1\|1388127_1388478_-	hypothetical protein	A0A141E0R8	Streptococcus_phage	9.8e-62	99.1
WP_000212166.1\|1388486_1392080_-	hypothetical protein	A0A141E0R9	Streptococcus_phage	0.0e+00	98.6
WP_000478007.1\|1392066_1392417_-	hypothetical protein	A0A060QN56	Streptococcus_phage	2.1e-56	100.0
WP_001185631.1\|1392455_1392836_-	hypothetical protein	A0A1S5SF40	Streptococcus_phage	9.3e-66	100.0
WP_000880665.1\|1392840_1393254_-\|tail	tail protein	A0A1S5SF61	Streptococcus_phage	3.3e-72	99.3
WP_000608235.1\|1393256_1393625_-	hypothetical protein	A0A1S5SFB8	Streptococcus_phage	1.2e-65	100.0
WP_000015940.1\|1393621_1394137_-	HK97 gp10 family phage protein	A0A141E0I0	Streptococcus_phage	9.3e-93	100.0
WP_001812940.1\|1394111_1394414_-	hypothetical protein	X2KU30	Streptococcus_phage	2.0e-42	100.0
WP_000021218.1\|1394430_1394742_-	hypothetical protein	A0A1S5S8S7	Streptococcus_phage	7.2e-48	99.0
WP_000669348.1\|1394743_1394932_-	hypothetical protein	A0A141DZN7	Streptococcus_phage	1.4e-27	100.0
WP_000863393.1\|1394941_1395967_-	sugar-binding protein	A0A1S5S8Q2	Streptococcus_phage	7.3e-190	99.7
WP_001288018.1\|1395989_1396514_-	DUF4355 domain-containing protein	E8ZDV2	Streptococcus_phage	1.7e-73	98.9
WP_000565273.1\|1396995_1397409_-	HD domain-containing protein	A0A1S5SBR9	Streptococcus_phage	5.4e-67	100.0
WP_000651746.1\|1397405_1397615_-	hypothetical protein	A0A1S5SB88	Streptococcus_phage	3.3e-33	100.0
WP_000356287.1\|1397616_1399200_-\|capsid	minor capsid protein	A0A1S5SDJ1	Streptococcus_phage	5.1e-299	99.2
WP_000084412.1\|1400642_1401941_-\|terminase	PBSX family phage terminase large subunit	A0A141E1F1	Streptococcus_phage	7.2e-259	99.3
WP_000863690.1\|1401918_1402431_-\|terminase	terminase small subunit	A0A060QNR7	Streptococcus_phage	1.5e-87	99.4
WP_001030244.1\|1403700_1404123_-	DUF1492 domain-containing protein	A0A141E1Y4	Streptococcus_phage	6.3e-71	100.0
WP_001268499.1\|1404240_1404558_-	hypothetical protein	A0A1S5SDY8	Streptococcus_phage	1.4e-51	98.1
WP_001041163.1\|1404619_1405147_-	DUF1642 domain-containing protein	A0A1S5SE80	Streptococcus_phage	2.4e-96	96.0
WP_000391853.1\|1405148_1405463_-	hypothetical protein	A0A1S5SDB3	Streptococcus_phage	1.5e-56	98.1
WP_000119453.1\|1405613_1405952_-	hypothetical protein	A0A1S5SDI1	Streptococcus_phage	5.6e-62	100.0
WP_000580029.1\|1406396_1407740_-	hypothetical protein	A0A1S5SAS5	Streptococcus_phage	7.7e-256	99.3
WP_000097191.1\|1407742_1408564_-	hypothetical protein	A0A1S5SDK7	Streptococcus_phage	6.5e-157	99.3
WP_000054337.1\|1408736_1409240_-	hypothetical protein	A0A126GGP3	Streptococcus_phage	2.9e-91	98.8
WP_000885998.1\|1409259_1410036_-	AAA family ATPase	A0A141DZQ7	Streptococcus_phage	8.7e-143	100.0
WP_001044592.1\|1410035_1410353_-	hypothetical protein	X2KPG0	Streptococcus_phage	2.0e-53	100.0
WP_100910900.1\|1410371_1411565_-	type III restriction endonuclease subunit R	X2KU10	Streptococcus_phage	5.3e-232	99.7
WP_000696057.1\|1411527_1412013_-	hypothetical protein	X2KUD4	Streptococcus_phage	1.4e-87	98.8
WP_000422308.1\|1412012_1412372_-	hypothetical protein	A0A1S5SB89	Streptococcus_phage	2.3e-58	99.2
WP_000157805.1\|1412371_1412854_-	siphovirus Gp157 family protein	A0A1S5S7W2	Streptococcus_phage	1.4e-79	100.0
WP_000544342.1\|1412846_1413569_-	HNH endonuclease	A0A141E0V1	Streptococcus_phage	3.3e-136	98.8
WP_000252078.1\|1413582_1413813_-	hypothetical protein	X2KU06	Streptococcus_phage	2.2e-33	100.0
WP_000189400.1\|1413813_1414155_-	hypothetical protein	A0A1S5S7X8	Streptococcus_phage	1.4e-57	100.0
WP_000970850.1\|1414166_1414358_-	hypothetical protein	A0A1S5SDN5	Streptococcus_phage	2.3e-28	100.0
WP_001050924.1\|1414354_1414549_-	hypothetical protein	X2KSX0	Streptococcus_phage	1.8e-09	100.0
WP_000454230.1\|1414545_1414818_-	hypothetical protein	A0A1S5SDW9	Streptococcus_phage	8.8e-42	100.0
WP_000834564.1\|1415158_1415350_+	hypothetical protein	X2KSW6	Streptococcus_phage	1.5e-27	98.4
WP_001826935.1\|1415303_1415510_-	hypothetical protein	A0A141E1R6	Streptococcus_phage	4.0e-31	100.0
WP_001112859.1\|1415532_1415724_-	DNA-binding protein	A0A141DZR9	Streptococcus_phage	3.0e-28	100.0
WP_000142893.1\|1415788_1416028_+	hypothetical protein	A0A141DZS0	Streptococcus_phage	4.7e-39	100.0
WP_001810072.1\|1416251_1416341_+	hypothetical protein	NA	NA	NA	NA
WP_000970295.1\|1416563_1416656_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_000493111.1\|1417053_1417407_+	helix-turn-helix transcriptional regulator	A0A1S5SEQ8	Streptococcus_phage	7.1e-60	99.1
WP_000156313.1\|1417408_1418503_+	hypothetical protein	A0A1S5SFA1	Streptococcus_phage	3.5e-206	100.0
WP_000151192.1\|1418725_1419106_+	ImmA/IrrE family metallo-endopeptidase	A0A1S5SFH2	Streptococcus_phage	1.1e-66	99.2
WP_000266847.1\|1419247_1420375_+\|integrase	site-specific integrase	A0A1S5SEM0	Streptococcus_phage	4.5e-209	100.0
WP_000011306.1\|1420462_1421374_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.5e-154	99.7
WP_001231086.1\|1421370_1422348_-	YvcK family protein	A1IMD5	Streptococcus_phage	1.2e-184	100.0
WP_000163035.1\|1422344_1423235_-	RNase adapter RapZ	NA	NA	NA	NA
WP_001140412.1\|1423286_1423667_-	RidA family protein	NA	NA	NA	NA
WP_000422599.1\|1423677_1424265_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_024478652.1\|1424273_1425506_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-131	59.0
1433254:1433286	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2034013 : 2042766

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000510412.1\|2034013_2034853_-	energy-coupling factor transporter ATPase	A0A2K9L3Z8	Tupanvirus	2.3e-16	29.8
WP_000835713.1\|2034837_2035665_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.1e-22	32.9
WP_000712132.1\|2035661_2036207_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_001227958.1\|2036217_2037039_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000170191.1\|2037080_2038364_-	insulinase family protein	A0A167R9K4	Powai_lake_megavirus	5.5e-17	30.7
WP_000424269.1\|2038360_2039611_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	8.6e-92	42.1
WP_000455898.1\|2039769_2040138_+	hypothetical protein	A0A1X9I5V8	Streptococcus_phage	4.5e-17	56.0
WP_100910936.1\|2040140_2041238_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_100910937.1\|2041287_2042766_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.9e-94	40.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP025838

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection