CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022592	Mycoplasma bovis strain NADC56 chromosome, complete genome	2 crisprs	NA	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022592_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022592_1

322672-322756

Orphan

Consensus_repeat	Method
TCTGGAACTCAAAGCGATTCGCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022592_1

>merge|NZ_CP022592|1|322672-322756|CRISPRCasFinder
TCTGGAACTCAAAGCGATTCGCCTGATTCATCAAGCTCTTCAAGCACATCTCGTACAGATTCTGGAACTCAAAGCGATTCGCCTG

>NZ_CP022592|1|1|322672-322756|CRISPRCasFinder
TCTGGAACTCAAAGCGATTCGCCTG	ATTCATCAAGCTCTTCAAGCACATCTCGTACAGAT
TCTGGAACTCAAAGCGATTCGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022592.1\|WP_013954649.1\|314440_315028_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013954652.1\|310449_310785_-\|HIT-family-protein	unknown	unknown	gnl\|CDD\|223611
NZ_CP022592.1\|WP_013954633.1\|328721_329651_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_CP022592.1\|WP_014829885.1\|323434_324421_+\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP022592.1\|WP_075271093.1\|328003_328720_-\|ribonuclease-HIII	unknown	unknown	gnl\|CDD\|260000
NZ_CP022592.1\|WP_013954635.1\|326841_327816_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP022592.1\|WP_013456603.1\|315141_315411_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP022592.1\|WP_013456076.1\|325342_325672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013954632.1\|329792_332378_-\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503
NZ_CP022592.1\|WP_013954647.1\|316106_318053_-\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_CP022592.1\|WP_013954653.1\|309632_310331_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013954631.1\|332391_334308_-\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|223265
NZ_CP022592.1\|WP_013954630.1\|334421_335819_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_CP022592.1\|WP_013954648.1\|315489_316044_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|179388
NZ_CP022592.1\|WP_013954638.1\|324404_325100_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|223434
NZ_CP022592.1\|WP_013954650.1\|312178_314347_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_038582854.1\|319781_320549_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223039
NZ_CP022592.1\|WP_013954636.1\|326141_326849_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013954646.1\|318151_319096_+\|endonuclease	unknown	unknown	gnl\|CDD\|367881
NZ_CP022592.1\|WP_013954651.1\|310784_312167_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP022592.1\|WP_013954652.1\|310449_310785_-\|HIT-family-protein	gnl\|CDD\|223611	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only].	5.20672e-31
NZ_CP022592.1\|WP_038582854.1\|319781_320549_+\|hypothetical-protein	gnl\|CDD\|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	5.22796e-06
NZ_CP022592.1\|WP_014829885.1\|323434_324421_+\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	2.84424e-164
NZ_CP022592.1\|WP_013954631.1\|332391_334308_-\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|223265	COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair].	0
NZ_CP022592.1\|WP_013954635.1\|326841_327816_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	2.47396e-81
NZ_CP022592.1\|WP_075271093.1\|328003_328720_-\|ribonuclease-HIII	gnl\|CDD\|260000	cd06590, RNase_HII_bacteria_HIII_like, Bacterial type 2 ribonuclease, HII and HIII-like. This family includes type 2 RNases H from several bacteria, such as Bacillus subtilis, which have two different RNases, HII and HIII. RNases HIII are distinguished by having a large (70-90 residues) N-terminal extension of unknown function. In addition, the active site of RNase HIII differs from that of other RNases H; replacing the fourth residue (aspartate) of the acidic "DEDD" motif with a glutamate. Most prokaryotic and eukaryotic genomes contain multiple RNase H genes; however, no prokaryotic genomes contain the combination of both RNase HI and HIII. This mutual exclusive gene inheritance might be the result of functional redundancy of RNase HI and HIII in prokaryotes. Ribonuclease (RNase) H is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, archaeal RNase HII and eukaryotic RNase H2/HII). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication or repair.	1.12092e-73
NZ_CP022592.1\|WP_013954632.1\|329792_332378_-\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0
NZ_CP022592.1\|WP_013954647.1\|316106_318053_-\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_CP022592.1\|WP_013954648.1\|315489_316044_+\|inorganic-diphosphatase	gnl\|CDD\|179388	PRK02230, PRK02230, inorganic pyrophosphatase; Provisional.	6.84527e-119
NZ_CP022592.1\|WP_013954630.1\|334421_335819_-\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	5.9383e-07
NZ_CP022592.1\|WP_013456603.1\|315141_315411_-\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	3.77072e-16
NZ_CP022592.1\|WP_013954633.1\|328721_329651_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.19348e-56
NZ_CP022592.1\|WP_013954646.1\|318151_319096_+\|endonuclease	gnl\|CDD\|367881	pfam04231, Endonuclease_1, Endonuclease I. Bacterial periplasmic or secreted endonuclease I (EC:3.1.21.1) E. coli endonuclease I (EndoI) is a sequence independent endonuclease located in the periplasm. It is inhibited by different RNA species. It is thought to normally generate double strand breaks in DNA, except in the presence of high salt concentrations and RNA, when it generates single strand breaks in DNA. Its biological role is unknown. Other family members are known to be extracellular. This family also includes a non-specific, Mg2+ activated ribonuclease precursor.	5.57394e-50
NZ_CP022592.1\|WP_013954638.1\|324404_325100_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|223434	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane].	1.24583e-40

>NZ_CP022592.1|WP_038582854.1|319781_320549_+|hypothetical-protein
MPNKVVITGFKDSLINENIIIKPEPIPPINRENPIMKDAETSTNDESSSSSTSRTDSGTQSDSPASSSSSSTSRTDSGTQSDSPASSSSSSTSRTDSGTQSDSPASSEPEKANSELSNERKIKEKGYRLNELTAYPYDLIDVDDDANKDELAKKLNDVITHKNGAIAIVGGSFFSKCNNLQLTGLSINKSIKSETKSQISTHNKLIGFFEGSDGYGIKVGHHGEANSKKYLFKWRLVKEDGNFGPKVYEQIIDLS
>NZ_CP022592.1|WP_013954646.1|318151_319096_+|endonuclease
MMNSKMIKHKFLVSLGLISAPVLSLTVLSSTGCNNKNSTTDDNYLIPEKSFYEKSNYYDSLEGLNGNKLYSELIKIQHNHLSGIKSYRYLKTIYKDAFKDLYYEKDGSLLDIYSENPIGKDPYNYSFNDSGSSAKSEGLGFNREHLVPQSWFKREKLARQDAHHVWPADILVNNKRDNYPFGKVTNAIFTSKNGTKIDSYLAEPIDEFKGDIARAHLYFAITHASRYKMHNKGNEVFKFFDNKPLVNKYFDTYTKWAKKDQINLFDIVRNNEIAKHQNGLRNPFSDYPELIDLIINPGNKVFVNKGILKSNIAV
>NZ_CP022592.1|WP_013954647.1|316106_318053_-|transketolase
MNINQKVVASMQAIALDSINNAGGGHIGSAIDISPIMYAVVAKHMKISADHPKWISRDRLILSAGHASMSFYSMMHFLGLLSLDEMKNHKRKHSKTPSHPETDAFDFVDASTGPLGQGIAMGVGMAIAEKKMSLKINKGNTKVIDNYTYVIAGDGCLQEGITHEALQIASVMKLNKFILIHDYNKIQLDTKVSDVSNVDLLAYFKALNFNVIEINEASYDNIDKAITEAKKSDRPTYIMVHNIIAPFTPFENTTKGHHGILNSEQTIEFKKAIGLENKAPFEYDSDVYEYGRTIMANKAKSYEEWLVELDNHKKQFPWIHSLLLETINNETNYDFSNILVKQDDLAIRDYFKAFSEIVDFSYPFLIGGGADVGSSTKVRFADSILDYGQRIDYGVREFAMTAINNGINLYGGLKTADSTFLAFSDYAKGALRLGGIMKLPAVHLYSHDSYLVGDDGPTHQPIEQVTVLRSIPNLLVIRPCDKYELVMGLNYAYNNTSTQVAIIGTRQPIKTMHSSKFSEFMAASLVYENKEFDISILSSGSEVELAYKTAVELKNHGIIANVISVPVLQKLVDNDELAIKLKLDKKPMFAIEASNDPLWYKLSKYNKIDGHFASEYGFSDKGNVVYDSMGFNVNSIVDKVKQFLSKNA
>NZ_CP022592.1|WP_013954648.1|315489_316044_+|inorganic-diphosphatase
MSNVIEIRIEIPKNSNIKYEYNREDGQIHVDRILRGDFKYPCNYGFIPNALDWDGDELDVLLYSPETFIPGVVVNARIIGAMKMNDSGETDTKLIAVHDDDYRLANINSLKELPEPFLLDIETFFNNYKNWKKPNLTKVLGFEDEKWAFAELEECKELMDKYGKMPKKEFVAKMMKEHPEKYTF
>NZ_CP022592.1|WP_013456603.1|315141_315411_-|30S-ribosomal-protein-S20
MANIKSKVKSIAKQEEFRQRNNAMKTRVRKAIRAAREAVLAKEEGFEKKVFEAHSIIATAVQKGIYHPNKGARKSSRLDHFVNEQKSKQ
>NZ_CP022592.1|WP_013954649.1|314440_315028_+|hypothetical-protein
MQMIIKTTAIEVLRELQKLLESENINYSLGLSNYYEYKNKPELFLINDIEVCLWHKDFYFLLKKYPNHFILPENLPFKSLAPYYKFQGSSIKINIIVGTSDEKINYWYKFRNYKRLIYWGNSKKHWFYYFLGHRTQRVYLHDLVNDLVVERYTKFIILNSEIDKFKAFDNLNFNKRFFVTEKGITIPFFEPFRSL
>NZ_CP022592.1|WP_013954650.1|312178_314347_-|hypothetical-protein
MGKKKTPFFERLLQKNAEQENKNKTTGKSKKSRSWKIATTSTVLVLAVATGITVPLVINSTKKNFIDGYASNTNVASAKIGDHNLDLNFGDFKDIYQNHNTSTSEERLKEIDKIILYYLYDQEQKASAEYQKLWNDSKRSDEKDNNSFRLPTLDELKTKFKNELVDIENNMKLQFGTANWQTEFNKHLVQKYNGAKNIDEAVKNKTFEHIKSDALRRFRLINGDSKKDEIERKGKDGKHVFGWWHKDNNENKFIELEDKSKLALATDSFVFKDSYKSIDPFIDSYIANEKPRIISEFTIPGIAPAKKNEKWKIDKNIFLRYLFYAKEGTFGLSKVTEGYNVVKEKFNSFDHYIKSVVDKANGKNILPDEAIQYSSILNMFSTSKEDIKKNWGTSGLTSISELVTGDNFQKFLANNPKLLFGENYSSGSTNGNKPKEIELFEKIKEISEKIAEVAKSSNGMSGSSSTGSSSNNNGALISNNTQATEYNTMLEKFFTEVNESQNKGLTEKVFEENILKKFVAIFEDKEKIQTVYKVKFNGNNIGAKNVTGILSPEGFKLLIFGDEIKKDELVKMIKNDFILNNKYKKQLGVRYNALQKLNKQLSRNEYILKMLQDNEFKEYLKTQNNNFATDQNGKKLENVKYNEQSIKDLITSSTAAIQFDKISNFIKLSKAAATWIETRAKNNYDELFELKDGKAYFKHNKDKTAASLVLEYLKKQFNLEAK
>NZ_CP022592.1|WP_013954651.1|310784_312167_-|hypothetical-protein
MKKISKKLLASLSLFTIPSVAIISAKCGNDVETTERLNQQKDLKDAKRVTELEEIWKNFALSYIYKIKPSNKHDAKSWKQNFEKEFQNQQSQLFKDSYDAYKIFALDQLSKNEYYFVEKSLEWKKNDVFKSNPFNWISTKNFPGETDQKDFIRIWMEDKTGIRKEINNMLLVKAYFDISELKKLQTIANNIANAGKADKDKSKDQKFEYFVGGKDAKFDLDHYNLVKYAFENKYIQLWKRTFDDKTTSNDVFTRKEIKNTISSKDDFNAFFKDTAEAEKKAKEWEIITKNNEDKELQGYAGIQKDPGTYGLNWNETDNKRRVTGSGTYGVYDALNSILISFNDLASKSSVGVKDKDGKSIVSYINQIVPVGKKIKLKTKEDYTKDKVEDSKLKETEVLSFEGTIYKEYLNKLAYLFYGKDSKNLLEKAIEAFAHLGVKIKVNKEIAPLYEQLKNKVWVEK
>NZ_CP022592.1|WP_013954652.1|310449_310785_-|HIT-family-protein
MDDLFLKIISGEEEGKIFYEDEYCVAFYDKFPIQPGHFLVVPRIKSKNIAEADDFTAGHLINTARKLGKQEVLDKGIAGFKILINTGRSADQSIFHTHVHVIPYKEKSKDN
>NZ_CP022592.1|WP_013954653.1|309632_310331_-|hypothetical-protein
MNKRKLLLMSSLMSVAPIMVAAKCNPDSDNIVEFRLGIKDLNLRFANYGAFSSKELDKMLKQKPLKDGEFTVVYPSQEELEKEAKIIRDFFEKEETKKIPSYQTIYKETYETIVLGKRPVMLSDFTNEYLWSRDLVKIIDNGSIKNKNKLKLIINQFIDNANGSTTAHFRIEHSDDQRIYEVVGDSNGYIIQFNGKLKTISPNHYHLTKEIIENNKGNLAVLLKANETTQRK
>NZ_CP022592.1|WP_014829885.1|323434_324421_+|ribose-phosphate-pyrophosphokinase
MNNNNALLFGMPNCIKLAERISKMINIPLSTLTLTKFADGETMPVSDEAVRGKDVYIIASTSRPVNDNLMILYLFIDSLKRASAKSINIALAYYGYARQDRKASGRQPIGAKLVADFLETAGASKIITVDLHNSAIQGFFNIPIDDLKASFTLAKAIKRSHEKFTVVSPDHGGTVRARSLAELISNDIKISIIDKRRTGINQTEVMGLIGDVKDQNAVIIDDIIDTGGTIIKAAETLKQYGAKKIVIAATHGIFSKGFDIFENNPAVEKVIITDSIDNDELLDKYKKLEIVSLDRFLGSVIDCSINGKSISMLYDKFAKEIKENESHK
>NZ_CP022592.1|WP_013954638.1|324404_325100_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MNHINKEYLLNKYSKQIPLLYRYAQMIYEKNKVMNICGFDSVDEIFNQGILGSILVFENAMNEYNHDFVNKKILDIGAGAGFPSVPLLIALDNKFELVIMESITKRCTFLESVKNEFNLNLTIINARAEEINDYNSYFDYICARAVGSVIKIYLMTNHHLAQNGYFILPKGKNYHAEIDEFKNKFTLEKDNISSFEYEDSINNENSSLVLIKKTKPTPRGWPWKWAKIKNY
>NZ_CP022592.1|WP_013456076.1|325342_325672_-|hypothetical-protein
MSRTKKLSISYLITYPIAFIVTVVLLVLYGRQLLDFAQQKEGFTGNLALWTVYLLYAVVIVVPFIMLIINILLIFFNVGTIARILLIVGLFVPWCSFVGALIALIRPGK
>NZ_CP022592.1|WP_013954636.1|326141_326849_-|hypothetical-protein
MNNYSEVAIELQSKLEEAINNIFEITNNEISINVEDVNILQRDNNSINSSTAIGYILEEYLIRKIEQYLSSPDCHFEFSMKPNNKANTSSYDFSLVYKDHLFYINLKANRNVNDAIAAINRLYSDYVEYEGKNPLHYLVFKTNYDIDKSKISNQNKIIIKGTYSFFLEQIDFSKGWKQDHRSWSPGGKLNSGRLIVSKNFFNENQIEISKISYEQTRAYLEEMFNKNFSVAEYEE
>NZ_CP022592.1|WP_013954635.1|326841_327816_-|DNA-cytosine-methyltransferase
MGKRGIIDLFAGAGGLTLGFTQNNFDILDTIEFWQPAVDTYNFNFKKNVVAKDITDSEVRNELESNWKNKTDLVIGGFPCQGFSLAGRRSKDDERNQLYKYTIDVISRLQPYGFVLENVKGILSFRESDNELVVDKIQKMLAKENYYTKFILLDSSNFGVPQKRERVIFIGCKDKEKVDKVISLLSKHKEKIVTVFDAIGHLEKVTDDKEIPNHIFSKHSEEIKERFMKLKEGESLSKSFSDAFRKLSYDKPSPTVKENHGGVHVHPVLPRVLTPRELANLQSFPEDFIFLGTKSNVLKQIGNAVPVKLSYEIAKIVNKVFFNE
>NZ_CP022592.1|WP_075271093.1|328003_328720_-|ribonuclease-HIII
MQFLDLDVESSLLENKSIIGVDEVGVGDYFGPLCACAVFIDAQNVNKVAELGIKDSKKLSDKRIKELALKLKNSGLIHYSLAHLNPSGYNKLNKSYNANILKMFVHLKAINSVVFKLKNIKYDYIFIDKYASVDNMLKYYNELVINNNWANFQEINEDILIANKAESYSISVAAASILARDQFLTLVSKMNDEYNTVFPLGAGPKVNAFAKDFFAKHSYDEEVIKKTCKKSFKMNILN
>NZ_CP022592.1|WP_013954633.1|328721_329651_-|Cof-type-HAD-IIB-family-hydrolase
MSTLTNNKKEKFLFAIDLDGTLLSSSRENIVPENCIKAIQRAKDEGHVVCIFTGRPWRSTKPIYDMLGLNTVVSNYNGAQIHNPKDDNFIPHIKYLNLNEMLYILGDQKVKKEISNLAIEGPGWVQLEHRDDDIEAVFGFSSAEKFTVGINLNKVPLSPTGIVFDVKETTDAEELRRYLRARYGDLGEFSYWSKGEGLTPVFDITNVTVNKGRALSLLSRYYGVDLDHTIAFGDGFNDVPMFKVATVSVVLGNAADLVKRHATVRLKKTNKEGGVGDYINKFLDNPEKEIAKSKAMALKMRKVSIQEEE
>NZ_CP022592.1|WP_013954632.1|329792_332378_-|DNA-topoisomerase-IV-subunit-A
MNKKKEQQLNDLLSKIVRENLDTVVADRFSRYSKYVIQQRALPDVRDGLKPVQRRILYSMYDLGLQHNKPFKKSARVVGDVIGKYHPHGDSSIYDAMVRMGQEWKMGHTLVEMHGNVGSIDDDPAAAMRYTEARLSEIADYVIGDIKKNTVKFAPNFDDSEKEPVVMPVLIPNLLINGSTGIASGFATEMPPHNLNEILDAAIAKIKNPAIELSKLAKIIQGPDFPTGGVIYGTDGIYEAFERGKGRITLASRYNVYSDNKYKYIEITEIPYGVIKSKLVHEIDLIVDSEEVAGLIEVKDQTDRNGINILITLDKNVNENVIVNYLFLKTQMRIYYNYNNVVIDNHTPKTMGISALLDAYLKHVKDVKVKTIEFDLIKHKARLEIVIGFLKVAKITDKVIEVIRKSEDSKQGVIDNLMSAFDFTLNQATAIAELRLYKLSKTDEHTFMFEKQELEEKIKQCELLLTNPDEFNNYLVSLFRDLKHKFGRIRRTSIEIEQINSSVNQEDLVKEEEVFLGISKFGYIKKVSKKTYESNLITTYGIKEDDNILFYDIASSLDKLLLFTNLGNYAYLPVFKVNESKWKEFGIHLSDFVDLSSGEEIVSVIKVSDFDVTNYVCMFTKKGQGKKVLLKDFDVSRFSKTFVAMKLKNDDELISAKLSNGLKDVLLITKNNFASLYSENDVPIYGLKSNGNKACYLANGDELVSFTVVKPNDSVALVSQSNKVRLINVSEISRVSKQNKGVSIFSKGRLNNAIVQCDPLLDETKLLLVNNQGQAHFEKIQNYVKQASTKFINFDADDIRTISLISNYSSTTNDNEFHSYEKESSDENQLMNKAIETKNSIDLSIDEILSKVDELLKKDKK
>NZ_CP022592.1|WP_013954631.1|332391_334308_-|DNA-topoisomerase-IV-subunit-B
MSNSNYDASSIQQLKGLEAVRKRPGMYIGSTDVNGLHHLIWEIVDNSIDEALAGEANEIAVILKNDGSVVVSDNGRGIPVGKTPSGKSAVELVFTELHAGGKFNEGAYKTSGGLHGVGSSVVNALSNKLKCLVYRDKHVYETIFENGDNIVQKTHIIGSTNKRGTLIQFWPNYEIFKKAKFNFETIAERLRESSFLISNLSIKLLDEQSGKSEEFKYSNGIKAFVEFINDSKTALFNVYSFKTVVNEIEIECGFQYTDGFNETILSFVNNVKTRDGGTHEIGLKSAITKTFNDFALDEKVLKGKNTFDGEDVREGLTVVLSVKIPEKFLEFVSQTKDKLGTPEAKSAVEEAVSKNLKTWITENKQIAKKILDKIKRASDSRESARKARLEARKTKSALKERQILSGKLTPAQTKNVKEKELFLVEGDSAGGSAKSGRDRKFQAILPLRGKVINTEKARLIDILKNEEINTIINAIGAGIGVDFDINKIQYDKVIIMTDADTDGAHIQILLLTFFFRHMRKLIEEGKVYIALPPLFKLSINKGQKKILYAWDEDELKELLQSKMKGAEVQRYKGLGEMNADQLWETTMNPETRTLIQVRIQDAALAERRVSTLMGDNVDSRKEWINKNVNFTMEDDFEI
>NZ_CP022592.1|WP_013954630.1|334421_335819_-|CvpA-family-protein
MKIIESLENIAFNSWSILIPIILVIFIVILAIVSGLRRGIYGGLIILLFGLSGWIIGIFAAKPLVDVIVIKTKITLPGNKQIDAEILRKMFYGIAMFVIQILFLIVGEIISLLLRKWIKKPLKNMRENKVSSVGSRSLGAVLSTAGIVPCAILTANVTGFLTTNNKVIDANDKMLNYISFKKAEGVSKYTPGLIASAKIGNDLLNASSGSKLDETVIGAFEWYLQQFANPDNYVLLSVSKDGQAKPIISTNALKNINRKEEQEKVLQGLIPFILGDSSVKKNGITLFFNFNTSSAGAFKYDSNSGKIEINTDNSENTQLKVKNIGKISNIFQLYTATPESFRILEYLSKLGLKDAKASEGFDEIYSLVDQTEPVWDILNAAQLKFNMNPSYRIKVYDREYVKRMKDILFDLFEKNTGGKFKYDRKELNEEKMKSWVTIQTIHQKIYWIVSSVIDNVFITPENVSN

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Crispr_ID: NZ_CP022592_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022592_2

655982-656088

Orphan

Consensus_repeat	Method
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022592_2

>merge|NZ_CP022592|2|655982-656088|CRISPRCasFinder
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTTTGTGGGGCATTGATTCATTTTTTTGATTTTCCTCATTATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT

>NZ_CP022592|2|2|655982-656088|CRISPRCasFinder
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT	TGTGGGGCATTGATTCATTTTTTTGATTTTCCTCATT
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022592.1\|WP_013455924.1\|662377_662710_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380386
NZ_CP022592.1\|WP_013456635.1\|662711_663599_+\|UTP--glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|133021
NZ_CP022592.1\|WP_075270941.1\|638391_639063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013456083.1\|652529_653717_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP022592.1\|WP_075271152.1\|646651_648862_-\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_CP022592.1\|WP_013456339.1\|653805_654627_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|224398
NZ_CP022592.1\|WP_013456269.1\|657049_658108_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_CP022592.1\|WP_075271115.1\|644009_646619_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366776
NZ_CP022592.1\|WP_075270942.1\|639509_640523_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013456157.1\|661308_661743_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP022592.1\|WP_013455983.1\|658291_659254_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|224383
NZ_CP022592.1\|WP_013456062.1\|639075_639504_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NZ_CP022592.1\|WP_115265564.1\|663973_666706_+\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_CP022592.1\|WP_013455970.1\|649048_651013_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|223350
NZ_CP022592.1\|WP_013456160.1\|656334_657042_+\|MjaI-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370566
NZ_CP022592.1\|WP_013954870.1\|666955_668818_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224196
NZ_CP022592.1\|WP_013456498.1\|651148_652396_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022592.1\|WP_013456078.1\|661744_662152_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP022592.1\|WP_013455919.1\|641722_643156_+\|transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP022592.1\|WP_080551570.1\|659847_660876_-\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382

Protein	Function_ID	Function_description	E-value
NZ_CP022592.1\|WP_013455924.1\|662377_662710_+\|hypothetical-protein	gnl\|CDD\|380386	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain. This family includes bacterial and some eukaryotic proteins homologous to reut_a1446, a Cupriavidus pinatubonensis protein of unknown function that may be related to mannose-6-phosphate isomerase. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.68782e-17
NZ_CP022592.1\|WP_080551570.1\|659847_660876_-\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.23257e-27
NZ_CP022592.1\|WP_013456083.1\|652529_653717_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP022592.1\|WP_075271152.1\|646651_648862_-\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_CP022592.1\|WP_013456339.1\|653805_654627_+\|DNA-binding-protein-WhiA	gnl\|CDD\|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	1.9574e-40
NZ_CP022592.1\|WP_013456269.1\|657049_658108_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.0519e-31
NZ_CP022592.1\|WP_013456157.1\|661308_661743_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.78069e-82
NZ_CP022592.1\|WP_013455983.1\|658291_659254_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|224383	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair].	3.3171e-21
NZ_CP022592.1\|WP_013456062.1\|639075_639504_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	0.000930954
NZ_CP022592.1\|WP_115265564.1\|663973_666706_+\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_CP022592.1\|WP_013455970.1\|649048_651013_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|223350	COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair].	0
NZ_CP022592.1\|WP_013456160.1\|656334_657042_+\|MjaI-family-restriction-endonuclease	gnl\|CDD\|370566	pfam09568, RE_MjaI, MjaI restriction endonuclease. This family includes the MjaI (recognizes CTAG but cleavage site unknown) restriction endonuclease.	3.88844e-32
NZ_CP022592.1\|WP_013954870.1\|666955_668818_+\|ABC-transporter-permease	gnl\|CDD\|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	1.22756e-09
NZ_CP022592.1\|WP_075271115.1\|644009_646619_-\|hypothetical-protein	gnl\|CDD\|366776	pfam01732, DUF31, Putative peptidase (DUF31). This domain has no known function. It is found in various hypothetical proteins and putative lipoproteins from mycoplasmas. It appears to be related to the superfamily of trypsin peptidases and so may have a peptidase function.	1.79194e-50
NZ_CP022592.1\|WP_013456078.1\|661744_662152_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	1.79038e-70
NZ_CP022592.1\|WP_013455919.1\|641722_643156_+\|transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.79198e-06
NZ_CP022592.1\|WP_013456635.1\|662711_663599_+\|UTP--glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|133021	cd02541, UGPase_prokaryotic, Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.	5.35032e-119

>NZ_CP022592.1|WP_013456339.1|653805_654627_+|DNA-binding-protein-WhiA
MNFTKEIKLEILSKKRNIDDASEFLRGYIYSKCIIDNDIIKLRIYDKSTKSTVLKSLNKIGIKYENKNTVILINKDNFSLIEDFSYPSSFFQGVFAGNGSISNLNNSSYHLQLASNYEEFIDIIINKLNEYDFNFVKIKHNNKFIAYIKKHEKISDFLKAISVTSSFFNFMDNTISRDFLNNTNRLRNIDASNINKIVTASNKYIKNIDLMYELELENKFNDDQLKLFQIMKENPNESLSSIADLYAYKENKSISKSGIYHWLKKLEKTVMKK
>NZ_CP022592.1|WP_013456083.1|652529_653717_+|phosphopentomutase
MAKFKRIFMIVTDGLGIGPDKDQKKFGDAGANTLYSASLSSMFFIDTWKKLGIGNVAQLEGNYHVKSPLAYVSRIQEVSNAKDTLAGHWEMMGIKTEVPFPTFTETGFPEDLITELEKAFDNRKIICNKAGSGTEIIDQYAEEQKQNGSIIVYTSNDSVLQIAAHEEWIGLENLYRYGKAAREICSSKPEWNVGRIIVRPFVGEDGKYTRTFNRHDYANAPEPMILNKLQEAGIEVIAIGKINDIFVGQGISRAIHSSGDADGMDKAIELAQLDEENKFIFVNLVQFDSHYGHRRDVDGFASNVATLDSKLGKLIQVMKKDDLLIMTSDHGNDPAYPGFNHTREMLPLTIYSKLFKEPRVLNDVTGLGTTGNIVARNFGVETVSLTGEDIFDKLV
>NZ_CP022592.1|WP_013456498.1|651148_652396_+|hypothetical-protein
MSNFNLILSREKFNHQQYASVKGIVKSKLNEYYSDKKNSRKINLATVGIYTSIPLFIIGAILLLSSITISFVVIFKTGKNEWLLNPDHFRPLLASLYSLSFVFLIAWCILYPIALRARIFLKKDIVASVNNRDLTDHLLDYINLKPRYENDENGNKIVNFGHISFFKNTSNFKNLSKFNVINNKYEMYEALSNKQFIKMQNIEYRNEEWLAINNLSNKEIKRLKKAKAKVYKGKIQRIEHNLYFGIATKLLNLNKSVSVTLFDEFNNYTPESFKKLDVKDEFSILNISSEDTELMQKWANDISNLSYLNDLKNEFDSIAINSSISLKNSRRDKSFAKDLSIFIKNQEAFIWFKTPTQLLDLSFKSPTLNKDEITELIVNKILDEFYLVYLSLMFLAPFGYDNVVSIDENETIVNQ
>NZ_CP022592.1|WP_013455970.1|649048_651013_-|NAD-dependent-DNA-ligase-LigA
MESKNAKELIKSLVDKINQWNYEYYQLNKPSVSDLEYDKALWELEKLEKEYPEFVLDDSPTFKLGSFASEKFTKFIHKKPMLSLAKAYSYDDIKSFINNISKIVPAERINFNIEPKVDGLSIALHYKKGKLVKAVTRGDGTEGEDVTENIYQIKSIPKLINYLNDLEVRGEVFISKDNFKKINESNNFANARNAASGTLRQLDSTIVAKRNLSAFLYEVVEPEMHNINYQNEALEFMKKLNIPTNPFSKVVEIEELEEAISDFAEIKNKLDYDSDGLVIKLNDLQMWEKLGKTSKFPKHSIAFKYDVEVASSTIVDILTSVGRTGKITYIANIHPVILNQTSVRAATLHNHNFIKDMNININDEVNIIKAGEIIPKVISLKNSKNYVDYYKKATNCPSCNSELIEFEGIVDQFCTNDECPEKNVNNIYHFASRNCMNIVGLGLSTVKDFYPKFIKKIKDIFSLYKYKSELILLPRYGEQKVDNILNSIESVKNKAFSKVLFALGIKHIGQRAAKLISDNYVNFAEILNDSELSKLKSTKNIGPKIIESLTEYINNPLNKDLLIYLDSIFNYEGKTKAISNIFSGYSFVITGTLSEPRSHFVKIIEENSGSVSASVSGRTSYVLAGSEAGSKLEKAYKLGVKVINEEQFYKLLEH
>NZ_CP022592.1|WP_075271152.1|646651_648862_-|putative-immunoglobulin-blocking-virulence-protein
MNLFRKKKNRVIILSLATGAVISASTGAFVYSSNSDSNLSKLLFNNSRDAELASNKNNISKSTDSIKDNNVIENTKPIAPKPVEEKVINVPDTTTENSSAPEVNRNTVTPERSEPLIAKPNVVTKQISIHGVIVNATIEVVPDRHISDYDKNKGISNINPYQNIIVSKVLNVEVTKELIDKSVSNALDGKDGTGLFAGTFFKTLENIFKSSSDLATAEEVVKQNMSVYRDNIHRYEKLLNSPNVINFLTEEGKQKYPTMKFDSPIQRNIWLINHLDKTKFTKLAKDAEAFLSQGLAISGRSAIINEDGTLSSLAFAPDDQFNTVTSRVSRDNRERRVFGYDSPYGRSPDSVWEGSYQGWNKEDVTDKPEYSRYNVSSADGIKLTKLTREKTDNSPGALNEGLVVEIDASNVSGYGKTLDLINKLKNDKVQVTSYRIKNMGSNDPSQAFKKILSALPDKIPQLELFFSAEATNNSSLIALENKHIKELSLYTLGNSLLHKWSFNPLALRKTEWINTVDYNVSRDFLPNTAIPTRITFDTIAFDKEDFKDKSFDRINDGLRMVYFARNNEPFFQAGLGPGLNPDHNEGNNSYPVGIDFSRIEGIKSLRNLVFNDVVNPNNTPRKIRRLTLFNNKPSFEISSDELTHASFEHFATDAMDRFSKPKIMFSNGDVTVSIRISDSNTLDSKAIWNLSKFFEYNEKLKSTKSIKVPENASALKEQLTKLGYRVESSDGNITYT
>NZ_CP022592.1|WP_075271115.1|644009_646619_-|hypothetical-protein
MRITKKLLLISSSASLFSSLLIAAKCNNDSSKNKSNDDKKIGLLSDDQFEKLINNTNNLNDIAQLTFSSNFGQSKSLDKTLPTEIEENPGNLKISVNNKYSDSITVTVNGAKTDKDASRNISNIKGEVSVYVGFKNKSTGKEIYKNFILKGLARNPVGADHNGRLSGDPLAAIGGQQGYLDYHKKTQTERFEKDNNEYVNRLKGMLSRDGGKEVDFKTFMGIKTTEEQIKKFNETAKLVNFDSYENAALKGFTIPVYENGSTSNPKLKVYDAPEVPKGPSPIDTIGRNIYRSNGLARTLLNETYKTIAEQTFQVSFTTLKDFEDEIKEAEKLKEDSKKWTTEQFQQFTFKDRAALKANYETNLYKLELEIKSQSPEALRGLEQSFAERKKKLKENYEAEDARLEKLDSSELAKEMDKRIAEYNKLKEEKRTYSSVSGTMWIMDFMLPENSGKGATKFYFGTNSHVAKGLTNKTTKFSVSRLNENVGVGSHFRLNDLDDRFTRFSFDNVEKDAINVIFQATDFLDSKPSDFLESSQKAKFGDVEEFMDFAVIEIDFEKILENKTKNFSAISNNKNHSSNYLNKSTEDIVKLITNNYESKKDKHIKFRSESYLKDYSKIDRPIILDTKKKEEVKKFNDLDSLYILGYPSATGDYFLENYIDEDQQKVVKTNFSMWINADEKYYKNVSAQEGAPSNHPKENLERGEFLSYEIGYRSFIDKPGLTDGFLAASRTGNDLYTINGKKYFNYGLHIMPRSYVPYGGASGSSVRNKNNELIAVFHTANNSAKTGLAATFRSYGYDYKGLFGDYKLPAYDLIYGGAPGQKNSYRDALEKKYKKNGKQYKTNLFQKGFSKDQIPQQFKFNETSSTTVDK
>NZ_CP022592.1|WP_013455919.1|641722_643156_+|transposase
MAIPVEIRQVERPKNTVVKNYFGKFKVVKRTSKYVNGKAIPKDLAIVGEIVDYKFVPFETPIPVGTRSKKNQEKTDIKDYGNIAIFTKNSNDILEKLLTHFDSSTAYKLYVIAILRCAYPKAVNRDLKFYYETSFMSELFKKVGLSESLLPDFFEKTGRAYSNIHNFMLDRINEFKGRVQIIDGTLKSYNSDEVTFSQWSRKGKVKGSKDFTLLYTCVLYTKEPIYHRPYQGNMLDSTIFEDFLENVPSTGEILVADKGFRTKAITELLEQNKNVKYLLPLKRNTTLIREEKLDENLTPVKIKDKQLLGSKKQINGKFFYLFKDLEIAGKESVGNYQKHLKRNTFNIDEFNKNNQFFGVIVFESNVDLSLEDVYTLYDQRWEIEEMFNFYKNILELSKTRVHSEMKVYTTEFINYLSLIIATKVKNNFIRLNLHQNYSFRQIIEYLRSYKVEVINNTEWKKRKVLKYVQDLAELLEI
>NZ_CP022592.1|WP_075270942.1|639509_640523_-|hypothetical-protein
MTKKELRKEQTNRFIEKTIITTDLLLSSYLYDSTKMEDFLSFIANLDNKYSYVNMCLIKDQFPGASIVKSYSSWKKENVQVRKTEKGISIFRPKVIEYVVYDNKKVTKDKWTNEIKELVKNNELEVYTYTKGFTLCKVFDISQTTLPKNQYPKQYFLYFIKEDNENIEPNTKLLSLLCNFIKKHNIGITYASMGLITSEQRFYGTNIYGIQHWIRLNDKNSITQNIYSLVKEYAHTLLGHDKSAINNIENEYQAKLVAFTVCKNLKLKGIELSSFDKFRSWVNQSTKQMRKKWINSVIFASKQFTNDFNYFLDEIEINVNKLNLSETDKINEATERE
>NZ_CP022592.1|WP_013456062.1|639075_639504_-|single-stranded-DNA-binding-protein
MQSSFLNRVRIYGFVISDSFTVIEYKSKYNINEKAIKFIINNIQNGKPNFIEIVVWDPTVVNYVLNNIRRLDLVEITGNLLVNSYTKDDKKYHKTYIKANRVLLSKTSKYHFEQPIQQPIQQPIQQPDQQSKDNVYTFFVED
>NZ_CP022592.1|WP_075270941.1|638391_639063_-|hypothetical-protein
MNYFTKESIKNILNATIPRKLKSSEIINKFNEIARSINNKIGNRTIYVNIILAINERVPAMVETGVFSKLLGKILKELYEELTEVNRLAQIYQLICNWSLLNINNKDNVKLVNFSLNEYLEADQIFEHKYLMNKATKSIDELGVKSPEMNLYIQLVRDCNEYAMVQLDKKGRAREFLENNLLLYYLAWLSEKKLDELLPKVSYLDISSDIATHAFNNLLNKKI
>NZ_CP022592.1|WP_013456160.1|656334_657042_+|MjaI-family-restriction-endonuclease
MKTKQNDDFRYEAIIQNSECLEKINFPKYFSPIVNLANQFTKATSPKNVGQLSELFKQYESYIKSQSSNLIPSVRNWEEYYETAVIEYGFSKDEAVDNAINKIFSMLKNFQNMLNSYDEQSLKNDVGVWVKKLMFEKTFTGLSVQKLIVEHIIKLTGCNYIWRLSTASEESLNIDAFINGKPIQIKPISYEHKKITKAIENIQIPIIEYNLNKNDGNIKIIVSNIKELKDYLKSK
>NZ_CP022592.1|WP_013456269.1|657049_658108_-|site-specific-DNA-methyltransferase
MHTKHTILNIDALKMNSHIDDESVDLVITSPPYPMIKMWDEIFEINENEIKTEADVNSAFLKATQFLNNIWEKVDKSIKPGGIVCINIGDATRNLGGNFRLFSNSGQVINFFIKKGYLQLPSIIWRKQTNAPNKFMGSGMLPAGAYATLEHEWILIFRKGITKREFKNAKDKSLRNESAFFWEERNVWFSDLWDFKGIKQKNDIKNSRDRTAAYPIELPYRLISMFSVKNDIVFDPFLGTGTTTLASMLLQRNSIGVEIDKSLCNHFKEYLVKNDVKLVDNFNDKISKRISSHTEFVKKRVNEGKLLKHYNSILGTEVMTSQEKFISFNKVSSINKIDDKTFEVIYKTLQSE
>NZ_CP022592.1|WP_013455983.1|658291_659254_+|DNA-polymerase-III-subunit-delta
MIFIYGPEKFLIEQEVQRIRKEHNDKVLEIFRFDDQASINDLISSASSNNLFTGSKLFLIYALPFFDKSILKDDLKNADDLINAINVNNQDIFVFINENIISKDKISVNSWTKFIFENNNHEVTMIEAKEISESKLFSLAKSLANKHKLHIDDEAIKLLINKVNNDTLMLSAEIIKLSNLEKHISAEVIENSTDTMLGDDVFAFSNALETNDLGIIWSKYKEKMLEGTEISALIGQISQIFIIAHQIYAYKVCHLSIDQLSRDLKLNSYRIKKISYFLSKIGINKIKKMILSLSKLDKDIKNGLISEKIGFERFLITFFN
>NZ_CP022592.1|WP_080551570.1|659847_660876_-|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIEIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_CP022592.1|WP_013456157.1|661308_661743_+|50S-ribosomal-protein-L13
MRQTTIVNREKANKKWFVVDAENQVVGRLAAFVASVLRGKTKPTFTPNADMGDYVIIINAEKAIFTAKKEEDKVYYHHSGYPGGLKSITAAKLRAKKPTAIVEKAIHGMLPHTKLGNKQRRNLFVVAGPEHKYAAQKPERLEVR
>NZ_CP022592.1|WP_013456078.1|661744_662152_+|30S-ribosomal-protein-S9
MAKSNSSMIEYRGLGRRKSSTARVILRPGSGKFTINNREAKNYLLSDLHIQDAEQPLVLTETKGQFDILVNVRGGGLKGQAGAIRLGIARALLLASDTYRAKLKPAGMLTRDARSVERKKPGLNKARRARQFSKR
>NZ_CP022592.1|WP_013455924.1|662377_662710_+|hypothetical-protein
MDNNVKLINNIYSNNLIKPILGCEKFYNIAQLGNSNIELIYSNSASTDWLINNDHDEVAILVQGSASLLDDSHKKINMQAGDCLFVKKNSRHKILSTSADAIWISIHNKE
>NZ_CP022592.1|WP_013456635.1|662711_663599_+|UTP--glucose-1-phosphate-uridylyltransferase
MNKKVRKLIIPAAGWGTRFLPMTKVVHKELLPILDTPLISLLVDEAIEAGIEEIILIISERKKDIANYFAVNKELETELESKNKLSLLKKVKSTNKEGLIKIVIQHSQNGLGHALACAKNVIKDEPFAIILGDDLIKSKVPAIKQLIEFYYKTGSNILGVQSVSDSDIPKYGIVAPIDENEKSTNFFKIKGAVEKPKLSEAPSNKAILGRYVFNSEILDILSKIEYDGSNEIQVVDAFEKLQNEYKQDIYAFVFEGTRYDLGSVKGFVQANIDYALDNIELKDELTEFINEKLSE
>NZ_CP022592.1|WP_115265564.1|663973_666706_+|HAD-IC-family-P-type-ATPase
MKWDEAQKFNGLSDEQVAINLQKYGENTLTKSKKINPIVAYFKQFIDPMVILLIIAAIISVSLAIFEHIKGSRNSTQIIIGYVEPAIIMLVILLNSAIGAYQEVKSDQAVRALENKTISNSTVIRNNEVQNIPANMLVVGDLVLLSAGDTINADGRIVNASNFYVVESSLTGESEAVLKTTNWNATDDKTLAENKHLVYSGTFVSNGKASYIVESVGKETQIGKINSSLQNQKKNLSPLQTKLNKLSKWFGYSGIILLFISMLLQIVFNNVSSGSWTNPDVYTNSLITGISLAVAAIPEGLIAFTTVILSIGVSKISKEKGLVKNLLAVETLGSANIICTDKTGTLTENKMTVVDLYLNKKGFLDKIDVNSNEFNELLNSLCFCNDAYLTIDNEEIKEIGDPTETGLLLFALKHSVTKQELLKTNNIIHTLPFDSDRKMMSVLVKDNKNNKIMITKGAPDVVIAKCNNIDKNEVMQINNDWAAKSYRVLAFAKKTVNHNSIDFKDEEDLEFIGLVAMIDPPRANVAKSVLEAQNAGIKVVMITGDNLITAKSIATNLGIYDPNGDDICLDGSELKDWDDDKLRNNVQKIAVYSRVNPSDKLRIVKAWQSYDKVVAMTGDGVNDAPALKASDIGCAMGITGTDVAKQSADFILTDDNFNTIVRSVKNGRQIYDKVKTVIMNLLISSVTEVIVMLIGLIAFYYAFKNYFSDSEFYVFSASQLLWINLLTHGLPAIALGIIDSEIDVMHRPPYSKSESIFARGMGINLLWQALVISLVSLLSYTGGALYTIRFYSGLNLLTIASTCAFVTMGIATSINAINLINNSSIFKTNIKKYWPVFAAISFSSLFVILVAFVPNLAKVFRMYEHLLTFDNGILISWSLPLAFVNTICFEIKKLIVNTKTNRTSVLSVSY
>NZ_CP022592.1|WP_013954870.1|666955_668818_+|ABC-transporter-permease
MSTSAFKYSKFAFNITFKKISTFILPILVLAFSLVIGLVYKFVVGQRYYDLAAYIFIFTNATATVIFSSIKALNIFKDFDSEGLEIITLSKPISRNNLILGKLLTLIYFGLIWSLVMLIASLFGLYAIFDVTKIFLVAILFLFVGLMTYLLFGLFTALICYKLSQKIAITIPIALFIPLALGGSLISANSTSNINNAAHFINRPYQYHASGNEANIEPYYLNNNKDELLLVPNGADNKGFSDEQIKYLQKVMNLSNNSSTEWQAYSWLSVPYQLIDIFNFKNKNVFETASVKKFSNLDNYVYHSGLDDVTYNYKLDTNVNLKKYITTDGSNSPKYIVPGALKSNSIFSDKTGDNGLFNYDIIYARAGAEDPNIEFLEDDANFSNEGANLVGRIKWRYIYEALKDEKFNSIAKNFVEKFNSKIVSQNNLVEINKLLMSEISNFINNDDIDNASEINKYENANVTIFDPNALKQKKLKSIFEKRIYFTVALLNYIYFNYSETKIYEAMLKNPNTKESFGNYQYTVNILGHDYKIGGYSSFVENVTPVGNRDSKGKIKNPKIKIRYDLNKSDTNYLFQSADQVYAINRSSQIVNKNAYYPIWIILNAILFVSVFALYRKKEYK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3471 : 78734

Bodo_saltans_virus(14.29%)

transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_115265524.1\|3471_4716_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_014829846.1\|4718_6038_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_013954491.1\|6309_7095_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_013954492.1\|7096_7888_+	alpha/beta hydrolase	G9E3U1	Emiliania_huxleyi_virus	7.8e-06	19.7
WP_115265595.1\|7939_9121_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_115276487.1\|9113_10160_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	1.2e-14	26.2
WP_013456070.1\|10229_11267_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	9.2e-15	25.9
WP_013456410.1\|11244_12114_-	deacetylase SIR2	NA	NA	NA	NA
WP_013954496.1\|12115_12460_-	calcium-binding protein	NA	NA	NA	NA
WP_013456398.1\|12443_13445_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_013456108.1\|13629_14433_+	hypothetical protein	NA	NA	NA	NA
WP_013455936.1\|14483_15890_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013456171.1\|16016_16469_-	hypothetical protein	NA	NA	NA	NA
WP_013456518.1\|16577_18182_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.2e-10	26.4
WP_013954498.1\|18174_20163_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_013456299.1\|20162_21140_+	ABC transporter permease	NA	NA	NA	NA
WP_013456248.1\|21417_22080_+	deoxynucleoside kinase	Q5ULP7	Lactobacillus_virus	2.9e-06	27.6
WP_013456161.1\|22081_22735_+	deoxynucleoside kinase	Q5ULP7	Lactobacillus_virus	1.9e-05	26.2
WP_013954499.1\|22942_24646_-	peptidase S41	NA	NA	NA	NA
WP_013456349.1\|24916_25822_-	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA
WP_013456608.1\|25824_26724_-	sugar kinase	NA	NA	NA	NA
WP_115303295.1\|27031_28060_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456023.1\|28421_29252_+	HAD family phosphatase	NA	NA	NA	NA
WP_115276488.1\|29285_31262_+	ABC transporter permease	NA	NA	NA	NA
WP_013954500.1\|31261_32284_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.6e-27	29.7
WP_013456151.1\|32390_32738_+	hypothetical protein	NA	NA	NA	NA
WP_013954501.1\|32712_34134_+	hypothetical protein	NA	NA	NA	NA
WP_101456648.1\|34480_35914_-\|transposase	transposase	NA	NA	NA	NA
WP_013456564.1\|36287_37622_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	4.5e-06	30.7
WP_013456445.1\|37614_39234_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.0e-13	28.6
WP_013456184.1\|39241_40255_-	ABC transporter permease	NA	NA	NA	NA
WP_013954502.1\|40256_41342_-	ABC transporter permease	NA	NA	NA	NA
WP_013954503.1\|41350_44302_-	variable surface lipoprotein	NA	NA	NA	NA
WP_115276489.1\|44315_54296_-	PDxFFG protein	NA	NA	NA	NA
WP_013954506.1\|56030_57272_+\|tRNA	class I tRNA ligase family protein	A0A1V0SAQ2	Catovirus	5.3e-41	30.9
WP_013954507.1\|57318_58020_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_013954508.1\|58009_58594_+	hypothetical protein	NA	NA	NA	NA
WP_013456379.1\|58649_58799_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_014829857.1\|58798_59035_+	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_013456192.1\|59040_59640_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA
WP_078086167.1\|60304_61906_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954511.1\|62132_64343_+	hypothetical protein	NA	NA	NA	NA
WP_013954512.1\|64500_65535_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_013954513.1\|65726_66449_+	UMP kinase	NA	NA	NA	NA
WP_013954514.1\|66448_67000_+	ribosome recycling factor	NA	NA	NA	NA
WP_013954515.1\|67268_68504_-	ComEC/Rec2 family competence protein	NA	NA	NA	NA
WP_013954516.1\|68581_69094_-	hypothetical protein	NA	NA	NA	NA
WP_101456642.1\|69188_70187_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_101456643.1\|70201_70990_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	E4ZFQ0	Streptococcus_phage	2.0e-09	25.2
WP_075270978.1\|70982_71744_-	TatD family hydrolase	NA	NA	NA	NA
WP_075270979.1\|71753_73091_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_013456626.1\|73218_73893_+	hypothetical protein	NA	NA	NA	NA
WP_013456534.1\|73924_74935_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_162293106.1\|75530_77132_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_115276490.1\|77465_78734_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.0e-80	45.2

DBSCAN-SWA_2

85123 : 95826

Faecalibacterium_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078086171.1\|85123_86152_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.0e-21	33.0
WP_041309069.1\|86354_87119_+	hypothetical protein	NA	NA	NA	NA
WP_013954530.1\|87111_88092_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	8.1e-53	40.6
WP_115303267.1\|88216_92593_+	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	6.2e-12	31.8
WP_013954532.1\|92998_94222_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.5e-61	35.1
WP_013456569.1\|94211_95177_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	3.6e-29	40.9
WP_013954533.1\|95166_95826_+	uracil-DNA glycosylase	A0A068EP41	Falconid_herpesvirus	1.6e-28	36.4

DBSCAN-SWA_3

141502 : 211765

Mycoplasma_phage(26.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173022447.1\|141502_143104_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_078086163.1\|143325_144354_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456546.1\|144871_145318_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_075271210.1\|145473_147531_+	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	7.2e-11	29.0
WP_013456267.1\|147508_147895_+	hypothetical protein	NA	NA	NA	NA
WP_013456026.1\|147923_148382_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_013455912.1\|148384_148780_+	cytidine deaminase	NA	NA	NA	NA
WP_013456544.1\|148791_149664_+	GTPase Era	NA	NA	NA	NA
WP_013456097.1\|149697_150747_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_013456141.1\|150864_152301_+\|tRNA	proline--tRNA ligase	A0A1V0SJ28	Klosneuvirus	1.1e-93	37.9
WP_013456293.1\|152360_152729_+	hypothetical protein	NA	NA	NA	NA
WP_075271211.1\|152844_154662_+	hypothetical protein	NA	NA	NA	NA
WP_013456555.1\|154757_155456_+	LemA family protein	NA	NA	NA	NA
WP_101456649.1\|155638_158026_+	phosphoketolase family protein	NA	NA	NA	NA
WP_101456650.1\|158084_159926_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	2.1e-17	19.1
WP_013456016.1\|160188_161601_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.2e-81	68.7
WP_013456380.1\|161584_162421_+	ABC transporter permease	Q6GZ02	Mycoplasma_phage	2.5e-87	62.0
WP_013456215.1\|162413_163307_+	spermidine/putrescine ABC transporter permease	Q6GZ01	Mycoplasma_phage	2.1e-92	62.3
WP_013455994.1\|163293_165195_+	membrane protein	Q6GZ00	Mycoplasma_phage	3.9e-80	34.2
WP_013456051.1\|165419_165620_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_075271213.1\|165683_167312_+	hypothetical protein	NA	NA	NA	NA
WP_075271214.1\|167313_168450_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_013455960.1\|168493_168772_-	hypothetical protein	NA	NA	NA	NA
WP_143823108.1\|168813_170295_-	BspA family leucine-rich repeat surface protein	NA	NA	NA	NA
WP_081375324.1\|170526_171876_-	DUF285 domain-containing protein	NA	NA	NA	NA
WP_075271216.1\|172622_175058_+	hypothetical protein	NA	NA	NA	NA
WP_075271217.1\|175209_177699_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	5.8e-140	39.9
WP_075271218.1\|177701_178562_+	bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-33	37.6
WP_013954592.1\|178661_179618_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_013954593.1\|179621_180815_+	acetate/propionate family kinase	NA	NA	NA	NA
WP_101456651.1\|180830_181253_+	pantetheine-phosphate adenylyltransferase	NA	NA	NA	NA
WP_101456652.1\|181252_181834_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_101456653.1\|181861_183358_+	hypothetical protein	NA	NA	NA	NA
WP_101456654.1\|183494_184931_+	pyruvate kinase	NA	NA	NA	NA
WP_101456655.1\|184999_185980_-	hypothetical protein	NA	NA	NA	NA
WP_101456656.1\|186230_188024_+	molecular chaperone DnaK	A0A0G2YAL1	Acanthamoeba_polyphaga_mimivirus	2.5e-129	45.8
WP_162293106.1\|188217_189819_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954995.1\|190129_191374_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_101456658.1\|191467_192751_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_013954601.1\|192909_193293_+	membrane protein	NA	NA	NA	NA
WP_013954602.1\|193430_194420_-	lactate dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	1.8e-39	32.9
WP_075271077.1\|194829_195630_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_013954605.1\|195745_195907_+	hypothetical protein	NA	NA	NA	NA
WP_013954606.1\|196083_196536_+	hypothetical protein	NA	NA	NA	NA
WP_115276493.1\|196703_199127_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_013954609.1\|202638_203763_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	3.8e-22	28.6
WP_173022964.1\|203891_204305_-	type III restriction endonuclease subunit M	NA	NA	NA	NA
WP_013954611.1\|204432_205938_-	trigger factor	NA	NA	NA	NA
WP_013954612.1\|206304_206463_+	hypothetical protein	NA	NA	NA	NA
WP_013954613.1\|206591_208001_-	hypothetical protein	NA	NA	NA	NA
WP_101456648.1\|209323_210757_+\|transposase	transposase	NA	NA	NA	NA
WP_115265597.1\|210775_211765_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.8e-21	33.8

DBSCAN-SWA_4

218746 : 306773

Enterobacteria_phage(15.79%)

integrase,transposase,tRNA

attL 224988:225047|attR 284005:285884

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101456648.1\|218746_220180_-\|transposase	transposase	NA	NA	NA	NA
WP_013954619.1\|220500_221418_-	5'-3' exonuclease	A0A0N7ACJ6	Bacillus_phage	1.3e-31	31.1
WP_013954620.1\|221419_224353_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.0e-87	34.4
224988:225047	attL	NA	NA	NA	NA
WP_078086174.1\|225175_226777_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_173022442.1\|228887_230267_-	hypothetical protein	NA	NA	NA	NA
WP_172792933.1\|230212_232549_-	S8 family serine peptidase	NA	NA	NA	NA
WP_078086163.1\|235201_236230_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013954995.1\|236880_238125_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_101456681.1\|238576_238951_-	hypothetical protein	NA	NA	NA	NA
WP_101456680.1\|239358_240381_-	variable surface lipoprotein	NA	NA	NA	NA
WP_101456679.1\|240739_242032_-	DUF21 domain-containing protein	NA	NA	NA	NA
WP_013954685.1\|242031_243507_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	6.0e-52	33.5
WP_013456489.1\|243496_243952_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_075271184.1\|243932_245933_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_013954682.1\|246222_247290_+	variable surface lipoprotein	NA	NA	NA	NA
WP_075271187.1\|247328_249098_-	hypothetical protein	NA	NA	NA	NA
WP_013456634.1\|249246_250071_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_075271189.1\|250057_251032_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_115265545.1\|251097_252315_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	2.7e-13	32.5
WP_075271192.1\|252440_253232_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_115265524.1\|253434_254679_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_013456065.1\|254728_254995_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_075271193.1\|255085_255973_-	hypothetical protein	NA	NA	NA	NA
WP_075271194.1\|256004_256847_-	HAD family phosphatase	NA	NA	NA	NA
WP_075271195.1\|256839_257706_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_075271196.1\|257776_260143_-	hypothetical protein	NA	NA	NA	NA
WP_075271197.1\|260179_261142_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.9e-06	26.5
WP_101456676.1\|261122_261719_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_101456675.1\|262669_264529_-	hypothetical protein	NA	NA	NA	NA
WP_075271156.1\|264723_265434_-	signal peptidase II	NA	NA	NA	NA
WP_075271157.1\|265435_268114_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	4.3e-80	27.3
WP_013954673.1\|268353_269973_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	5.9e-109	39.8
WP_013954672.1\|270918_272076_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_081376848.1\|272068_272851_-	hypothetical protein	NA	NA	NA	NA
WP_078086164.1\|273372_274974_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954669.1\|275338_276307_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	3.8e-31	29.2
WP_115303269.1\|276380_277607_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_013954660.1\|277879_279268_+\|transposase	transposase	NA	NA	NA	NA
WP_013954666.1\|280053_280605_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_173022449.1\|280591_282208_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_078086174.1\|282274_283876_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954995.1\|284680_285925_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
284005:285884	attR	NA	NA	NA	NA
WP_115265541.1\|285950_289085_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	2.3e-24	24.8
WP_013954663.1\|289314_291585_-	S8 family peptidase	NA	NA	NA	NA
WP_013954662.1\|291586_292630_-	AAA family ATPase	A0A2H4UTU5	Bodo_saltans_virus	9.9e-09	29.0
WP_013456112.1\|293102_294536_+\|transposase	transposase	NA	NA	NA	NA
WP_115265540.1\|294681_296907_+	AAA family ATPase	A0A2K9V9X6	Bandra_megavirus	2.3e-31	26.7
WP_013455939.1\|297769_298432_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_013456585.1\|298418_299264_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_013456514.1\|299275_300274_-	serine/threonine protein kinase	Q85453	Moloney_murine_sarcoma_virus	4.3e-17	32.2
WP_013456579.1\|300291_301044_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_013456283.1\|301049_301637_-	guanylate kinase	A0A0M5KCK5	Mollivirus	1.2e-08	38.6
WP_013456572.1\|301979_302222_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_013456627.1\|302224_304414_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.0e-71	33.5
WP_075270989.1\|304434_305220_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_014829889.1\|305222_306773_+\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	1.9e-80	35.7

DBSCAN-SWA_5

340436 : 489841

Enterobacteria_phage(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013954625.1\|340436_342278_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_013954624.1\|342599_343049_+	hypothetical protein	NA	NA	NA	NA
WP_041323925.1\|343223_345539_+	S8 family serine peptidase	NA	NA	NA	NA
WP_172792934.1\|345484_346864_+	hypothetical protein	NA	NA	NA	NA
WP_014829881.1\|347501_348935_+	hypothetical protein	NA	NA	NA	NA
WP_013954995.1\|349426_350671_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_101456682.1\|351621_351921_-	PTS transporter subunit EIIB	NA	NA	NA	NA
WP_013954995.1\|352409_353654_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_101456683.1\|355103_355961_+	variable surface lipoprotein	NA	NA	NA	NA
WP_115265547.1\|356389_357739_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.9e-12	23.8
WP_101456685.1\|357731_359342_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_101456686.1\|359407_360847_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_101456687.1\|360958_363055_-	peptidase S41	NA	NA	NA	NA
WP_075271013.1\|363018_364860_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_075271012.1\|364862_367172_-	leucine-rich repeat protein	NA	NA	NA	NA
WP_075271011.1\|367196_367490_-	hypothetical protein	NA	NA	NA	NA
WP_075271010.1\|367490_368852_-	variable surface lipoprotein	NA	NA	NA	NA
WP_013954698.1\|369371_370205_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	3.6e-54	45.7
WP_013954699.1\|370511_371465_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_013954700.1\|371514_372411_+	elongation factor Ts	NA	NA	NA	NA
WP_115276497.1\|372444_374319_-	peptidase S41	NA	NA	NA	NA
WP_013954702.1\|374342_374846_-	dUTP diphosphatase	S6AVW3	Thermus_phage	5.6e-10	32.8
WP_078086168.1\|375148_376750_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954704.1\|377135_378500_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_173022604.1\|378954_380556_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954705.1\|380685_381471_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_013954706.1\|381475_383005_-	RNA polymerase sigma factor	G8CLC7	Synechococcus_phage	2.0e-29	33.7
WP_101456689.1\|382997_384938_-	DNA primase	A0A1S5RFD7	Helicobacter_phage	5.7e-42	35.3
WP_013954708.1\|384979_386356_-\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	3.9e-53	32.0
WP_013954709.1\|386467_388255_-	membrane protein	NA	NA	NA	NA
WP_013954710.1\|388705_390061_+	alkylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013456298.1\|390063_390996_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-07	30.0
WP_013456124.1\|390959_392711_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_115276499.1\|392817_393063_-	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_013456030.1\|393143_395657_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_038582866.1\|395899_396946_+	zinc-dependent alcohol dehydrogenase family protein	A0A0K0KVL7	Prochlorococcus_phage	1.0e-13	26.9
WP_075271040.1\|397094_398945_-	type I DNA topoisomerase	A0A2P1ELA0	Moumouvirus	3.7e-75	32.2
WP_013456432.1\|399312_399750_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_013456362.1\|399791_400190_+	single-stranded DNA-binding protein	A0A0H3U4B5	Staphylococcus_phage	9.3e-08	30.3
WP_115265550.1\|400209_400536_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_013954995.1\|401429_402674_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_078086163.1\|403580_404609_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456295.1\|404952_405408_-	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA
WP_115303271.1\|405472_407140_-	amino acid permease	NA	NA	NA	NA
WP_013954716.1\|407378_408695_+\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	2.7e-11	25.1
WP_013456122.1\|408763_410467_+\|tRNA	aspartate--tRNA ligase	A0A2K9KZX5	Tupanvirus	2.0e-14	23.1
WP_013954691.1\|410550_411795_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_013456084.1\|411892_412684_-	aquaporin family protein	M1HQW3	Paramecium_bursaria_Chlorella_virus	7.3e-12	27.5
WP_013954718.1\|412692_414201_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_013456345.1\|414490_415882_-	hypothetical protein	NA	NA	NA	NA
WP_041309259.1\|416014_417001_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_013456401.1\|417017_417986_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_013456470.1\|418099_418843_-	DNA repair protein RecO	NA	NA	NA	NA
WP_013456409.1\|419022_419307_+	hypothetical protein	NA	NA	NA	NA
WP_115276501.1\|419299_420946_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_013456463.1\|420952_421957_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_013456004.1\|421949_422624_+	ribonuclease III	M4QMG4	Micromonas_pusilla_virus	1.2e-18	31.9
WP_115265551.1\|422696_425675_+	AAA family ATPase	NA	NA	NA	NA
WP_013954721.1\|425727_427080_-	YitT family protein	NA	NA	NA	NA
WP_013954722.1\|427174_428011_+	HAD family phosphatase	NA	NA	NA	NA
WP_013954723.1\|427997_428729_-	DNA-processing protein DprA	NA	NA	NA	NA
WP_013455919.1\|429086_430520_+\|transposase	transposase	NA	NA	NA	NA
WP_038582875.1\|430612_431653_+	zinc-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	5.2e-34	29.7
WP_143823096.1\|431974_432193_+	variable surface lipoprotein	NA	NA	NA	NA
WP_013954995.1\|432223_433468_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_173022443.1\|433508_433994_-	hypothetical protein	NA	NA	NA	NA
WP_013954726.1\|434610_437412_-	C1 family peptidase	NA	NA	NA	NA
WP_013954727.1\|437640_444672_+	hypothetical protein	NA	NA	NA	NA
WP_013954730.1\|445384_445585_-	hypothetical protein	NA	NA	NA	NA
WP_014829909.1\|445704_446436_-	hypothetical protein	NA	NA	NA	NA
WP_038582704.1\|447240_448149_+	variable surface lipoprotein	NA	NA	NA	NA
WP_078086171.1\|448487_449516_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.0e-21	33.0
WP_013954755.1\|449901_451026_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_013954756.1\|451036_453679_+\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	6.5e-65	36.1
WP_013954757.1\|453671_454112_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_013954758.1\|454101_454830_+	hypothetical protein	NA	NA	NA	NA
WP_013954760.1\|457422_458145_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	1.4e-06	33.8
WP_101456648.1\|458349_459783_-\|transposase	transposase	NA	NA	NA	NA
WP_013954761.1\|460127_460580_+	SocA family protein	A0A0N9SGM1	Paenibacillus_phage	2.0e-22	41.0
WP_173022965.1\|461179_462538_+	DUF285 domain-containing protein	NA	NA	NA	NA
WP_014829922.1\|462756_463026_-	hypothetical protein	NA	NA	NA	NA
WP_014829924.1\|464176_465538_+	hypothetical protein	NA	NA	NA	NA
WP_038582722.1\|465538_467548_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_013456441.1\|467605_467872_+	hypothetical protein	NA	NA	NA	NA
WP_013954770.1\|467864_468716_+	hypothetical protein	NA	NA	NA	NA
WP_013954771.1\|468708_468933_+	hypothetical protein	NA	NA	NA	NA
WP_013954772.1\|468952_469384_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_013954773.1\|469396_470050_+	hypothetical protein	NA	NA	NA	NA
WP_115276503.1\|470277_471798_+	hypothetical protein	NA	NA	NA	NA
WP_013456404.1\|472265_472571_+	hypothetical protein	NA	NA	NA	NA
WP_101456648.1\|477202_478636_+\|transposase	transposase	NA	NA	NA	NA
WP_013954780.1\|479402_479990_+	hypothetical protein	NA	NA	NA	NA
WP_013954781.1\|479992_484516_+	hypothetical protein	NA	NA	NA	NA
WP_013954782.1\|484850_485495_+	hypothetical protein	NA	NA	NA	NA
WP_115276504.1\|485658_486897_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	3.1e-09	27.0
WP_101456648.1\|487164_488598_-\|transposase	transposase	NA	NA	NA	NA
WP_013455927.1\|488824_489841_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6

DBSCAN-SWA_6

629214 : 766632

104

Staphylococcus_phage(15.79%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101456648.1\|629214_630648_+\|transposase	transposase	NA	NA	NA	NA
WP_075271025.1\|631062_631509_-	hypothetical protein	NA	NA	NA	NA
WP_013456044.1\|631655_632729_-	hypothetical protein	NA	NA	NA	NA
WP_013455971.1\|632733_633093_-	hypothetical protein	NA	NA	NA	NA
WP_075271026.1\|633498_634488_-	hypothetical protein	NA	NA	NA	NA
WP_115276505.1\|636598_637276_-	hypothetical protein	NA	NA	NA	NA
WP_075271143.1\|637324_637921_-	hypothetical protein	NA	NA	NA	NA
WP_075270940.1\|637936_638368_-	hypothetical protein	NA	NA	NA	NA
WP_075270941.1\|638391_639063_-	hypothetical protein	NA	NA	NA	NA
WP_013456062.1\|639075_639504_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_075270942.1\|639509_640523_-	hypothetical protein	NA	NA	NA	NA
WP_013455919.1\|641722_643156_+\|transposase	transposase	NA	NA	NA	NA
WP_075271115.1\|644009_646619_-	hypothetical protein	NA	NA	NA	NA
WP_075271152.1\|646651_648862_-	putative immunoglobulin-blocking virulence protein	NA	NA	NA	NA
WP_013455970.1\|649048_651013_-	NAD-dependent DNA ligase LigA	Q332J4	Clostridium_botulinum_C_phage	3.9e-83	31.7
WP_013456498.1\|651148_652396_+	hypothetical protein	NA	NA	NA	NA
WP_013456083.1\|652529_653717_+	phosphopentomutase	NA	NA	NA	NA
WP_013456339.1\|653805_654627_+	DNA-binding protein WhiA	NA	NA	NA	NA
WP_115265600.1\|654841_656026_-	DUF285 domain-containing protein	NA	NA	NA	NA
WP_013456160.1\|656334_657042_+	MjaI family restriction endonuclease	E3SIW0	Synechococcus_phage	2.6e-21	35.1
WP_013456269.1\|657049_658108_-	site-specific DNA-methyltransferase	S4VS49	Pandoravirus	2.8e-19	29.4
WP_013455983.1\|658291_659254_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_080551570.1\|659847_660876_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456157.1\|661308_661743_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_013456078.1\|661744_662152_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_013455924.1\|662377_662710_+	hypothetical protein	NA	NA	NA	NA
WP_013456635.1\|662711_663599_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.1e-48	38.4
WP_115265564.1\|663973_666706_+	HAD-IC family P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	5.9e-77	29.3
WP_013954870.1\|666955_668818_+	ABC transporter permease	NA	NA	NA	NA
WP_013954871.1\|668820_669525_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-19	31.8
WP_013954872.1\|669502_670651_+	hypothetical protein	NA	NA	NA	NA
WP_013954873.1\|670640_671531_+	hypothetical protein	NA	NA	NA	NA
WP_013954874.1\|671517_672405_+	hypothetical protein	NA	NA	NA	NA
WP_013954875.1\|672430_674002_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	2.0e-69	33.3
WP_013954876.1\|674046_675012_+	ECF transporter S component	NA	NA	NA	NA
WP_013954877.1\|675033_675453_+	transcription antitermination protein NusB	NA	NA	NA	NA
WP_013456406.1\|675559_676162_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_013456586.1\|676468_676741_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_013954878.1\|676767_677703_+	ABC transporter permease	NA	NA	NA	NA
WP_013954879.1\|677703_678822_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_013954880.1\|678825_681048_+	hypothetical protein	NA	NA	NA	NA
WP_013954881.1\|681077_681971_+	nucleotidyltransferase	NA	NA	NA	NA
WP_013954882.1\|682021_682690_-	hypothetical protein	NA	NA	NA	NA
WP_013456602.1\|683224_683833_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	8.6e-13	37.6
WP_013456480.1\|683813_684002_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_004023890.1\|684026_684377_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_013954884.1\|684448_687868_-	ATP-binding protein	NA	NA	NA	NA
WP_115276515.1\|688086_688752_-	hypothetical protein	NA	NA	NA	NA
WP_013954886.1\|688802_689561_-	phosphotransferase	NA	NA	NA	NA
WP_013954887.1\|689637_691431_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	5.7e-20	23.1
WP_013954888.1\|691506_692958_+	phosphotransferase	NA	NA	NA	NA
WP_013954889.1\|693041_693773_+	nitroreductase	NA	NA	NA	NA
WP_013954890.1\|693845_694640_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_115276530.1\|694681_694882_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_101456648.1\|695078_696512_-\|transposase	transposase	NA	NA	NA	NA
WP_013455927.1\|696738_697755_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
WP_115303277.1\|699642_701028_+\|transposase	transposase	NA	NA	NA	NA
WP_101456648.1\|701046_702480_-\|transposase	transposase	NA	NA	NA	NA
WP_013954894.1\|704462_706034_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_014829956.1\|706096_707716_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_013954896.1\|707828_709073_-	AEC family transporter	NA	NA	NA	NA
WP_013954897.1\|709304_710276_-	lactate dehydrogenase	NA	NA	NA	NA
WP_004023902.1\|710482_710719_-	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_013954898.1\|711035_712010_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_013954899.1\|712029_713232_+	acetate/propionate family kinase	NA	NA	NA	NA
WP_013954900.1\|713240_714146_+	hypothetical protein	NA	NA	NA	NA
WP_013954901.1\|714202_716467_+	hypothetical protein	NA	NA	NA	NA
WP_013954902.1\|716764_718231_+	MFS transporter	NA	NA	NA	NA
WP_013455927.1\|718382_719399_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
WP_101456648.1\|719625_721059_+\|transposase	transposase	NA	NA	NA	NA
WP_013954903.1\|721453_722290_+	HAD hydrolase family protein	NA	NA	NA	NA
WP_013954904.1\|722291_723128_+	deoxyribonuclease IV	A0A1V0SHV6	Klosneuvirus	1.1e-29	33.1
WP_013954905.1\|723159_724866_+	membrane protein	NA	NA	NA	NA
WP_013456450.1\|724880_725222_+	thioredoxin	NA	NA	NA	NA
WP_013456570.1\|725227_726943_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_013954907.1\|726962_727367_-	hypothetical protein	NA	NA	NA	NA
WP_013954908.1\|727656_729843_+	P80 family lipoprotein	NA	NA	NA	NA
WP_014829957.1\|729907_731077_+	thermonuclease family protein	NA	NA	NA	NA
WP_115265569.1\|731085_733188_+	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	1.6e-18	28.8
WP_013456613.1\|733171_734239_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_013456037.1\|734177_735161_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_013456278.1\|735176_735455_+	hypothetical protein	NA	NA	NA	NA
WP_013456467.1\|735462_737001_+	hypothetical protein	NA	NA	NA	NA
WP_013456486.1\|737070_738339_-	GTPase ObgE	NA	NA	NA	NA
WP_013456545.1\|738450_739275_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_013456427.1\|739560_740262_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_115265570.1\|740280_741576_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	5.7e-115	55.0
WP_115265571.1\|741585_742254_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_013954919.1\|742298_743081_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_115265572.1\|743199_744252_+	hypothetical protein	NA	NA	NA	NA
WP_013456562.1\|744295_745201_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_013954921.1\|745190_746129_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	2.5e-19	30.5
WP_013954922.1\|746119_746917_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.9e-21	33.5
WP_013456394.1\|747091_747457_-	50S ribosomal protein L17	NA	NA	NA	NA
WP_013456482.1\|747456_748467_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA
WP_004023933.1\|748486_748888_-	30S ribosomal protein S11	NA	NA	NA	NA
WP_004023934.1\|748907_749279_-	30S ribosomal protein S13	NA	NA	NA	NA
WP_014829961.1\|749285_749399_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_004023936.1\|749414_749633_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_013954923.1\|749639_750389_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_013456188.1\|750427_751078_-	nucleoside monophosphate kinase	A0A2K9L7B8	Tupanvirus	1.4e-08	33.6
WP_013456323.1\|751071_752550_-	preprotein translocase subunit SecY	NA	NA	NA	NA
WP_013456001.1\|757911_759345_+\|transposase	transposase	NA	NA	NA	NA
WP_078086178.1\|765603_766632_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8

DBSCAN-SWA_7

798745 : 833866

Staphylococcus_phage(44.44%)

transposase,integrase,tRNA

attL 804285:804309|attR 810134:810158

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013954691.1\|798745_799990_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_115276531.1\|800780_801908_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_075271129.1\|802031_803333_+	ATP-binding protein	NA	NA	NA	NA
804285:804309	attL	NA	NA	NA	NA
WP_075270949.1\|804836_805757_+\|integrase	site-specific integrase	A8ATD6	Listeria_phage	1.6e-79	48.3
WP_013954950.1\|805802_809000_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_115276532.1\|809008_810097_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	7.4e-07	25.9
WP_013954952.1\|810200_812879_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.0e-91	39.6
810134:810158	attR	NA	NA	NA	NA
WP_014829966.1\|813382_814795_+\|transposase	IS1634-like element ISMbov2 family transposase	NA	NA	NA	NA
WP_014829967.1\|814893_815646_+	hypothetical protein	NA	NA	NA	NA
WP_013954954.1\|815702_816191_-	hypothetical protein	NA	NA	NA	NA
WP_013954957.1\|817317_817872_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_013954958.1\|817880_819815_-	peptidase S41	NA	NA	NA	NA
WP_115276518.1\|819841_821884_-	peptidase S41	NA	NA	NA	NA
WP_075271178.1\|822171_823563_+\|tRNA	glutamate--tRNA ligase	A0A222YZ70	Escherichia_phage	6.6e-08	25.2
WP_013456580.1\|823553_823955_+	hypothetical protein	NA	NA	NA	NA
WP_013456621.1\|824217_825366_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.8e-102	52.4
WP_013456411.1\|826566_827925_-	signal recognition particle protein	D6PHS7	uncultured_phage	8.7e-05	29.0
WP_013456099.1\|827943_828768_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013456213.1\|828839_829079_-	hypothetical protein	A0A172JI00	Bacillus_phage	4.6e-10	40.9
WP_101456714.1\|829172_830585_-\|transposase	IS1634-like element ISMbov2 family transposase	NA	NA	NA	NA
WP_101456648.1\|831189_832623_-\|transposase	transposase	NA	NA	NA	NA
WP_013455927.1\|832849_833866_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6

DBSCAN-SWA_8

853407 : 932126

Enterobacteria_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013456540.1\|853407_854796_+\|transposase	transposase	NA	NA	NA	NA
WP_013954983.1\|855230_857063_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.4e-28	25.3
WP_038582898.1\|857073_858858_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.0e-29	26.3
WP_013954985.1\|859081_860551_-	hypothetical protein	NA	NA	NA	NA
WP_013456163.1\|860809_861055_-	YneF family protein	NA	NA	NA	NA
WP_013954986.1\|861080_862169_-	M42 family peptidase	NA	NA	NA	NA
WP_014829974.1\|862271_863516_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	6.9e-09	26.6
WP_075271052.1\|863560_871558_-	hypothetical protein	NA	NA	NA	NA
WP_013954989.1\|871713_876150_-	DNA-directed RNA polymerase subunit beta'	A0A076FGB9	Aureococcus_anophage	3.2e-48	23.5
WP_013456481.1\|876142_879778_-	DNA-directed RNA polymerase subunit beta	W8W1V4	Invertebrate_iridescent_virus	2.0e-48	26.9
WP_004024017.1\|881008_881380_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_172792937.1\|881406_881901_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_013456027.1\|882392_883118_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_115276519.1\|883129_884599_-\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	6.8e-80	36.9
WP_013954990.1\|884752_885643_+	hypothetical protein	NA	NA	NA	NA
WP_013954991.1\|885687_887847_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_013954992.1\|887993_890162_+	AAA family ATPase	K4FB40	Cronobacter_phage	1.1e-107	34.4
WP_013954995.1\|891404_892649_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_115288272.1\|893672_894401_+	hypothetical protein	NA	NA	NA	NA
WP_013954995.1\|894426_895671_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_013954660.1\|896854_898243_-\|transposase	transposase	NA	NA	NA	NA
WP_013456062.1\|899312_899741_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_075270941.1\|899753_900425_+	hypothetical protein	NA	NA	NA	NA
WP_075270940.1\|900448_900880_+	hypothetical protein	NA	NA	NA	NA
WP_075271143.1\|900895_901492_+	hypothetical protein	NA	NA	NA	NA
WP_075271028.1\|901540_902218_+	hypothetical protein	NA	NA	NA	NA
WP_115276520.1\|902269_904282_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_013456390.1\|904330_905320_+	hypothetical protein	NA	NA	NA	NA
WP_013455971.1\|905725_906085_+	hypothetical protein	NA	NA	NA	NA
WP_013456044.1\|906089_907163_+	hypothetical protein	NA	NA	NA	NA
WP_075271025.1\|907309_907756_+	hypothetical protein	NA	NA	NA	NA
WP_075271024.1\|907739_910526_+	DUF87 domain-containing protein	NA	NA	NA	NA
WP_115288227.1\|910531_910786_+	hypothetical protein	NA	NA	NA	NA
WP_115303281.1\|910851_911643_+	hypothetical protein	NA	NA	NA	NA
WP_115265524.1\|911697_912942_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_075271022.1\|916549_916795_+	hypothetical protein	NA	NA	NA	NA
WP_075271144.1\|916766_918482_+	DUF2326 domain-containing protein	NA	NA	NA	NA
WP_075271020.1\|918585_919038_+	SocA family protein	A0A0N9SGM1	Paenibacillus_phage	1.2e-22	44.3
WP_078086178.1\|919372_920401_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8
WP_075271147.1\|920851_922432_+	hypothetical protein	NA	NA	NA	NA
WP_075271018.1\|922569_923832_-	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_075271017.1\|924046_924400_-	hypothetical protein	NA	NA	NA	NA
WP_075271016.1\|924479_925319_-	ParA family protein	E2ELL2	Clostridium_phage	2.3e-08	24.5
WP_075271005.1\|926097_927234_+	hypothetical protein	NA	NA	NA	NA
WP_173022444.1\|927368_927533_-	hypothetical protein	NA	NA	NA	NA
WP_013954997.1\|927654_928752_+	DNA adenine methylase	M1HGA9	Paramecium_bursaria_Chlorella_virus	6.5e-27	31.6
WP_014829976.1\|928733_929675_+	DNA adenine methylase	A0A1W6JN66	Lactococcus_phage	6.5e-52	39.9
WP_013954999.1\|929813_930104_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_013456497.1\|930107_930791_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_013456054.1\|930780_931131_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_013955000.1\|931286_932126_-\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	9.1e-05	23.7

DBSCAN-SWA_9

1012428 : 1062115

Staphylococcus_phage(28.57%)

transposase,integrase,tRNA

attL 1012095:1012146|attR 1042249:1042300

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1012095:1012146	attL	NA	NA	NA	NA
WP_078086180.1\|1012428_1013457_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013955061.1\|1013667_1014675_+	ECF transporter S component	NA	NA	NA	NA
WP_173022969.1\|1015144_1015693_-	collagen-like protein	NA	NA	NA	NA
WP_101456648.1\|1017170_1018604_+\|transposase	transposase	NA	NA	NA	NA
WP_115276525.1\|1021945_1022554_+	variable surface lipoprotein	NA	NA	NA	NA
WP_115303287.1\|1022812_1023469_-	variable surface lipoprotein	NA	NA	NA	NA
WP_115303289.1\|1023636_1023999_-	hypothetical protein	NA	NA	NA	NA
WP_173022967.1\|1024073_1024310_-	hypothetical protein	NA	NA	NA	NA
WP_013456123.1\|1025637_1026387_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_013955063.1\|1026785_1028630_+	ribonuclease J	NA	NA	NA	NA
WP_013955064.1\|1028764_1029916_+	hypothetical protein	NA	NA	NA	NA
WP_014829996.1\|1030105_1032523_+	DUF2779 domain-containing protein	NA	NA	NA	NA
WP_013955066.1\|1032540_1032849_-	hypothetical protein	NA	NA	NA	NA
WP_075271049.1\|1033146_1034568_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_013955068.1\|1034560_1035874_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_013955069.1\|1035873_1036179_-\|tRNA	glutamyl-tRNA(Gln) amidotransferase	NA	NA	NA	NA
WP_013955070.1\|1036184_1037039_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_013456616.1\|1037050_1037629_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	1.2e-11	29.7
WP_013955071.1\|1037618_1038380_-	segregation/condensation protein A	NA	NA	NA	NA
WP_013456430.1\|1038372_1039113_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_013456524.1\|1039122_1039437_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_013456382.1\|1039610_1040921_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_013456261.1\|1040923_1041589_-	(d)CMP kinase	NA	NA	NA	NA
WP_014829997.1\|1041659_1042121_-	hypothetical protein	NA	NA	NA	NA
WP_013955073.1\|1042408_1043542_-	DnaJ domain-containing protein	A0A1V0SBY2	Catovirus	3.0e-27	32.2
1042249:1042300	attR	NA	NA	NA	NA
WP_013955074.1\|1043779_1044121_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_013955075.1\|1044294_1045530_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	3.3e-59	33.2
WP_013955076.1\|1045540_1046143_-\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_013456246.1\|1046204_1047107_+	DegV family protein	NA	NA	NA	NA
WP_014829999.1\|1047267_1047501_-	acyl carrier protein	NA	NA	NA	NA
WP_013955078.1\|1047540_1048263_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_013456073.1\|1048262_1049339_-	peptide chain release factor 1	NA	NA	NA	NA
WP_013955080.1\|1049464_1050037_-	Fic family protein	NA	NA	NA	NA
WP_013955081.1\|1050058_1051480_-	YitT family protein	NA	NA	NA	NA
WP_013954660.1\|1052934_1054323_-\|transposase	transposase	NA	NA	NA	NA
WP_013955084.1\|1054637_1056605_+	type IIA DNA topoisomerase subunit B	G3M9Z3	Bacillus_virus	8.7e-131	41.5
WP_013955085.1\|1056727_1057042_+	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	1.7e-12	39.0
WP_013955086.1\|1057094_1057541_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	1.8e-12	37.4
WP_115276526.1\|1058030_1059419_-\|transposase	transposase	NA	NA	NA	NA
WP_078086167.1\|1060513_1062115_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022592

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection