CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031255	Neisseria elongata strain M15910 chromosome, complete genome	2 crisprs	DEDDh,cas9,cas1,cas2,DinG,cas4,cas7,cas8c,cas5,cas3,csa3,WYL	0	33	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031255_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031255_1

430827-432446

TypeII

Consensus_repeat	Method
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	PILER-CR
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CRT

24 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP031255_1

>merge|NZ_CP031255|1|430827-432446|PILER-CR,CRISPRCasFinder,CRT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCCGTGCAGGACGGCAAGCCGTGGACAGCCCATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCATTGCAAAAGCATTTAGGCTGGAAACGCAAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCTGTAATTGGTTTTGGGTGTAATGTTTTAACATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCTGTAATTGGTTTTGGGTGTAATGTTTTAACATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGTTTTGCGACTGGGTGCACATTTTTGTAAGATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGCCCAAATCATAGATTTCTTTGATCGCAAGATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCGGTTCGCTCGTTGTGATAGACGAAGCACAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGAAGTTATCAATGGTTATGAGAAAAAGCCTATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCAAACCCTTTGCAAGTTGCCTACCAGCTTGCATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGCAAGTCGGAACATGCGGAACGGCTTGCCTATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGCCGCGCCGCGCATATAGTCCACATGCCCCATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCTGGCTCGCTGGTTGTGATAGACGAAGCACAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCTATACTTCAAAATCAAGGAAGACCGCCGCATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCAAGTAGCCTCTGAACAACTTTGCCAAATCTATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCATATTATGGGCGGCTAAAACTAAAGAGCCAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCAATTGGAGAGCATAATTCCAGCATCTTTTATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCAAGGACTATTGATAGCGGCTAAGTTATACAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCATCAAAGTAATGGCCGTTGGAAATAAAGCAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCAATGCGGGATGCCATGCACCCTTTGTTGAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGTCACAGGTGTTGTAAAACAAACATCATCTATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCAAACGGAAATGAACAAGGTAATAAATTGGAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCGTCGAATTGACTTCAATTCCGTGGGAGAATATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCCAAAAGCTGAAAAGTCCGAAAACCAACGCATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGCCCCTAGCAACTGCGCCTTTTGCGGTTCAGAATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGA

>NZ_CP031255|1|1|430827-432380|PILER-CR
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCGTGCAGGACGGCAAGCCGTGGACAGCCC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATTGCAAAAGCATTTAGGCTGGAAACGCAA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGTAATTGGTTTTGGGTGTAATGTTTTAAC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGTAATTGGTTTTGGGTGTAATGTTTTAAC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTTTTGCGACTGGGTGCACATTTTTGTAAG
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCCCAAATCATAGATTTCTTTGATCGCAAG
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CGGTTCGCTCGTTGTGATAGACGAAGCACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GAAGTTATCAATGGTTATGAGAAAAAGCCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAACCCTTTGCAAGTTGCCTACCAGCTTGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCAAGTCGGAACATGCGGAACGGCTTGCCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCCGCGCCGCGCATATAGTCCACATGCCCC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGGCTCGCTGGTTGTGATAGACGAAGCACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CTATACTTCAAAATCAAGGAAGACCGCCGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAGTAGCCTCTGAACAACTTTGCCAAATCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATATTATGGGCGGCTAAAACTAAAGAGCCA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CAATTGGAGAGCATAATTCCAGCATCTTTT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAGGACTATTGATAGCGGCTAAGTTATACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATCAAAGTAATGGCCGTTGGAAATAAAGCA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CAATGCGGGATGCCATGCACCCTTTGTTGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTCACAGGTGTTGTAAAACAAACATCATCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAACGGAAATGAACAAGGTAATAAATTGGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTCGAATTGACTTCAATTCCGTGGGAGAAT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCAAAAGCTGAAAAGTCCGAAAACCAACGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC

>NZ_CP031255|1|1|430827-432446|CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCGTGCAGGACGGCAAGCCGTGGACAGCCC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATTGCAAAAGCATTTAGGCTGGAAACGCAA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGTAATTGGTTTTGGGTGTAATGTTTTAAC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGTAATTGGTTTTGGGTGTAATGTTTTAAC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTTTTGCGACTGGGTGCACATTTTTGTAAG
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCCCAAATCATAGATTTCTTTGATCGCAAG
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CGGTTCGCTCGTTGTGATAGACGAAGCACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GAAGTTATCAATGGTTATGAGAAAAAGCCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAACCCTTTGCAAGTTGCCTACCAGCTTGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCAAGTCGGAACATGCGGAACGGCTTGCCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCCGCGCCGCGCATATAGTCCACATGCCCC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGGCTCGCTGGTTGTGATAGACGAAGCACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CTATACTTCAAAATCAAGGAAGACCGCCGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAGTAGCCTCTGAACAACTTTGCCAAATCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATATTATGGGCGGCTAAAACTAAAGAGCCA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CAATTGGAGAGCATAATTCCAGCATCTTTT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAGGACTATTGATAGCGGCTAAGTTATACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATCAAAGTAATGGCCGTTGGAAATAAAGCA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CAATGCGGGATGCCATGCACCCTTTGTTGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTCACAGGTGTTGTAAAACAAACATCATCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAACGGAAATGAACAAGGTAATAAATTGGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTCGAATTGACTTCAATTCCGTGGGAGAAT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCAAAAGCTGAAAAGTCCGAAAACCAACGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCCTAGCAACTGCGCCTTTTGCGGTTCAGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGA

>NZ_CP031255|1|1|430827-432446|CRT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCGTGCAGGACGGCAAGCCGTGGACAGCCC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATTGCAAAAGCATTTAGGCTGGAAACGCAA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGTAATTGGTTTTGGGTGTAATGTTTTAAC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGTAATTGGTTTTGGGTGTAATGTTTTAAC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTTTTGCGACTGGGTGCACATTTTTGTAAG
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCCCAAATCATAGATTTCTTTGATCGCAAG
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CGGTTCGCTCGTTGTGATAGACGAAGCACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GAAGTTATCAATGGTTATGAGAAAAAGCCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAACCCTTTGCAAGTTGCCTACCAGCTTGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCAAGTCGGAACATGCGGAACGGCTTGCCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GCCGCGCCGCGCATATAGTCCACATGCCCC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	TGGCTCGCTGGTTGTGATAGACGAAGCACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CTATACTTCAAAATCAAGGAAGACCGCCGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAGTAGCCTCTGAACAACTTTGCCAAATCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATATTATGGGCGGCTAAAACTAAAGAGCCA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CAATTGGAGAGCATAATTCCAGCATCTTTT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAGGACTATTGATAGCGGCTAAGTTATACA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	ATCAAAGTAATGGCCGTTGGAAATAAAGCA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CAATGCGGGATGCCATGCACCCTTTGTTGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTCACAGGTGTTGTAAAACAAACATCATCT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	AAACGGAAATGAACAAGGTAATAAATTGGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	GTCGAATTGACTTCAATTCCGTGGGAGAAT
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCAAAAGCTGAAAAGTCCGAAAACCAACGC
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGC	CCCTAGCAACTGCGCCTTTTGCGGTTCAGA
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031255.1\|WP_114921546.1\|433051_433795_-\|oxygen-insensitive-NADPH-nitroreductase	unknown	unknown	gnl\|CDD\|182710
NZ_CP031255.1\|WP_114921551.1\|442385_443267_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP031255.1\|WP_107854651.1\|418895_420443_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP031255.1\|WP_107854653.1\|423600_423996_+\|META-domain-containing-protein	unknown	unknown	gnl\|CDD\|377111
NZ_CP031255.1\|WP_107855426.1\|443532_444114_+\|DUF1415-domain-containing-protein	unknown	unknown	gnl\|CDD\|377792
NZ_CP031255.1\|WP_107854666.1\|437347_438835_-\|NTPase	unknown	unknown	gnl\|CDD\|284995
NZ_CP031255.1\|WP_114921547.1\|434080_435265_+\|5-demethoxyubiquinol-8-5-hydroxylase-UbiM	unknown	unknown	gnl\|CDD\|236385
NZ_CP031255.1\|WP_049252380.1\|422789_423215_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|234796
NZ_CP031255.1\|WP_107971574.1\|444110_444473_+\|YbaN-family-protein	unknown	unknown	gnl\|CDD\|377291
NZ_CP031255.1\|WP_107854665.1\|424119_425040_-\|DUF4743-domain-containing-protein	unknown	unknown	gnl\|CDD\|239648
NZ_CP031255.1\|WP_107971686.1\|435970_437080_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP031255.1\|WP_114921549.1\|439186_440194_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|225581
NZ_CP031255.1\|WP_009174361.1\|430436_430763_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP031255.1\|WP_107854656.1\|429529_430444_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP031255.1\|WP_114921550.1\|440326_442222_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP031255.1\|WP_107854654.1\|425069_425831_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377360
NZ_CP031255.1\|WP_114921548.1\|435356_435884_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031255.1\|WP_107854655.1\|426209_429458_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP031255.1\|WP_049252378.1\|421379_422777_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_CP031255.1\|WP_107854652.1\|420465_421344_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535

Protein	Function_ID	Function_description	E-value
NZ_CP031255.1\|WP_114921546.1\|433051_433795_-\|oxygen-insensitive-NADPH-nitroreductase	gnl\|CDD\|182710	PRK10765, PRK10765, oxygen-insensitive NADPH nitroreductase.	3.52088e-125
NZ_CP031255.1\|WP_107854651.1\|418895_420443_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP031255.1\|WP_107854653.1\|423600_423996_+\|META-domain-containing-protein	gnl\|CDD\|377111	pfam03724, META, META domain. Small domain family found in proteins of of unknown function. Some are secreted and implicated in motility in bacteria. Also occurs in Leishmania spp. as an essential gene. Over-expression in L.amazonensis increases virulence. A pair of cysteine residues show correlated conservation, suggesting that they form a disulphide bond.	5.42534e-22
NZ_CP031255.1\|WP_107855426.1\|443532_444114_+\|DUF1415-domain-containing-protein	gnl\|CDD\|377792	pfam07209, DUF1415, Protein of unknown function (DUF1415). This family consists of several hypothetical bacterial proteins of around 180 residues in length. The function of this family is unknown.	3.85558e-100
NZ_CP031255.1\|WP_107854666.1\|437347_438835_-\|NTPase	gnl\|CDD\|284995	pfam07693, KAP_NTPase, KAP family P-loop domain. The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals. Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side.	3.60921e-45
NZ_CP031255.1\|WP_114921547.1\|434080_435265_+\|5-demethoxyubiquinol-8-5-hydroxylase-UbiM	gnl\|CDD\|236385	PRK09126, PRK09126, FAD-dependent hydroxylase.	0
NZ_CP031255.1\|WP_049252380.1\|422789_423215_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|234796	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated.	1.59242e-48
NZ_CP031255.1\|WP_107971574.1\|444110_444473_+\|YbaN-family-protein	gnl\|CDD\|377291	pfam04304, DUF454, Protein of unknown function (DUF454). Predicted membrane protein.	2.0444e-43
NZ_CP031255.1\|WP_107854665.1\|424119_425040_-\|DUF4743-domain-containing-protein	gnl\|CDD\|239648	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.82234e-60
NZ_CP031255.1\|WP_114921551.1\|442385_443267_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.73424e-18
NZ_CP031255.1\|WP_114921549.1\|439186_440194_-\|IS5-family-transposase	gnl\|CDD\|225581	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair].	1.69501e-59
NZ_CP031255.1\|WP_009174361.1\|430436_430763_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.08533e-60
NZ_CP031255.1\|WP_107854656.1\|429529_430444_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.92378e-130
NZ_CP031255.1\|WP_114921550.1\|440326_442222_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP031255.1\|WP_107854654.1\|425069_425831_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377360	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase. This is a family of putative SAM-dependent methyltransferases.	3.23447e-104
NZ_CP031255.1\|WP_107971686.1\|435970_437080_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.59903e-16
NZ_CP031255.1\|WP_107854655.1\|426209_429458_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP031255.1\|WP_049252378.1\|421379_422777_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP031255.1\|WP_107854652.1\|420465_421344_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	2.87133e-139

>NZ_CP031255.1|WP_009174361.1|430436_430763_+|CRISPR-associated-endonuclease-Cas2
MSEAKFMRIIVFFDLPVTTVAKRKAANQFRHFLLKDGYQMLQLSVYSRIVKGRDALQKHHNRLCANLPQEGSIRCLEVTEKQFAAMKLLLGELKTQEKKVNSDQLLLF
>NZ_CP031255.1|WP_107854656.1|429529_430444_+|type-II-CRISPR-associated-endonuclease-Cas1
MTWRSLLIQNSGKLSLHREQMLIRQNGESYTVPLEDIAVIVVENRETLITAPLLSALAEYGTTLLTCDEQFLPCGQWLPYSQYHRQLKTLKLQLNISEPLKKQLWQHIVRRKILNQAFVADETGNDIAAKRLRALAAEVRSGDTGNREAQAAALYFQAVFGEKFTRNDNNAVNANLNYAYAVIRAAVARSLALYGWLPALGLFHKSELNPFNLADDFIEPLRPLADLTILNLKEQGRLKSELMPQTKQALIRILHSQVGIEQQTFSTLAAIDKMMASFQPSLAAKNVKLLKLPEILPLKEYQYE
>NZ_CP031255.1|WP_107854655.1|426209_429458_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTVFKPNPLNYILGLDIGIASVGWAMVEIDDKENPIRLIDLGVRVFERAEVPKTGDSLAATRRLARSIRRLIRRRAHRLLRARRLLKHEGVLNPEDFNENGFIKLLPNTPWQLRTAALDRKLTPLEWAAVLLHLVKHRGYLSQRKNEGETDDKELGALLKGVADNTHALQAGNFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELVLLFEKQKEFGNPHVSDDLKNGIENLLMTQRPALSGDAIQKMLGHCTFEPAEPKAAKNTYTAERFIWLTKLNNLRILNQGNERPLTDAERTTLMDEPYKKSKLTYAQARKLLGLDDTAFFKGLRYGKDNAESATLMEMKAYHAISRALEKEGLKDKKSPLSLSPELQDEIGTAFSLFKTDEDITGRLKDCLQPEILDALLKHISFDKFIQISLKALRRIVPLMEQGKRYDEACAEIYGDHYGEKNSEEMLYLPPIPADEIRNPVVLRALSQARKVINAVVRRYGSPARIHIETAREVGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNLVGEPKSKDILKLRLYEQQHGKCLYSGKEIDLGRLNEKGYVEIDHALPFSRTWDDSFNNKVLVVGSENQNKGNRTPYEYLNGKDNSREWLEFKARVETSRFPHSKKQRVLLQKFDEEGFKERNLNDTRYVNRFLCQFVADHMHLTGKGKRRVFASNGQITNLLRGFWGLHKVRAENDRHHALDAVVVACSTVAMQQKITRFVRYKEMNAFDGKTIDKETGEVLHQKTHFPQPWKFFTQEVMIRVFGKPDGEPEFEEADTPEKLRALLAEKLPSRPEAIHEYVMPLFVSRAPNRKMSGQGHMETVKSVKRLNEGISVLRVPLTQLKLKDLEKMVNREREPKLYAGLKARLEAHKDDPVKAFAEPFYKHDKAGNRTQQVKAVRVEQVQKTGVWVRNRNGIADNATMVRVDVFEKAGKYYLVPIYSWQVAKGILPDRAVVAYAEEENWTVMDESFKFKFVLYANDLIKLTAKKNEFLGYFVSLNRATGAIDIRTHDTDSTKGKNGIFQSVGVKTALSFQKYQIDELGKEIRLCRLKKRPPVR
>NZ_CP031255.1|WP_107854654.1|425069_425831_-|class-I-SAM-dependent-methyltransferase
MNFFCYAADGASDDTLAEISGYGISIYDHPPSDGLYLYADSEGISLCKAGEKGHVQVDFVGGGAQYRRLKGGGELIAKAVNHTACPSVIDATGGLGRDAFVLAAQGLPVSIIERHPVVACLLSDGLRRARAAEETSAIAKRMTLHYGDAVQLLSDLAAAGRPDVVYLDPMYPERQKSAAVKKEMAYFHQLIGSAQNTDDAELLAAARDVATKRIVVKRPRLGALLAQCTPAYQYSGKSTRFDIYLPTRPSVGE
>NZ_CP031255.1|WP_107854665.1|424119_425040_-|DUF4743-domain-containing-protein
MPPLPTTLQDGLLSALQTAFRYHAEDWLPLRLNGLALGFVNEVWRKHLIQDWPNPLHEDSDGLHLFTDNWIEMGRQLEQLALHWYDAGLFGGWRNERFDVWSADGRQILFALERSAFRPLGLYSHAVHINGLAVTEEGLHFWIARRSPHKAVDPNKLDTLVGGGISAGEQIWEAAKREGREEAGLTDAVLNRLQYTGRCISLHQVSRGLHRECLHIFDVILPNEVMPQNQDGEVASFALMSAEEAALAMCNGEMMNDSVLVTADLFHRLGMLDCGHPLAAYLQAARHSTDLIGRPSENMFGPNLAK
>NZ_CP031255.1|WP_107854653.1|423600_423996_+|META-domain-containing-protein
MGKILCFAVGLLLSACASMPSSEALNGEWLPEEIGGSPFTAQASLTFDSEQQLLSSYAGCNRLTTRYSADNGKLDFGYTSSTRMACDSEHSEAEHKISQVFVQAEKFGIQDGKLLIKDGQGNVLLRAVKSS
>NZ_CP031255.1|WP_049252380.1|422789_423215_+|F0F1-ATP-synthase-subunit-epsilon
MDVMRVEVVSNEYNIYSGEASFVVVPTVQGELGIYPRHEPIMSLVRPGALRLQIPGEKEEVLVAVSGGVLEVQPDKLTVLADVAIRSSEMDQARAEEAKKAAEAGIAKAADDEALAKAHSALAAALAELKTLDYIRSRKHQ
>NZ_CP031255.1|WP_049252378.1|421379_422777_+|F0F1-ATP-synthase-subunit-beta
MSQGKIVQIIGAVVDVEFPRDAIPHVFDALKLVENDLTLEVQQLLGDGVVRTIAMGSSDGLKRGMAVNNTGAPITVPVGRETLGRIMDVLGNPVDEAGPVNASNTRAIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDKLTVMRARKIQRFLSQPFHVAEVFTGSPGKYVPLRDTIAGFKAILSGEYDHLPEQAFYMVGGIEEAAEKAKTLN
>NZ_CP031255.1|WP_107854652.1|420465_421344_+|F0F1-ATP-synthase-subunit-gamma
MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARPYADKVRLVMGHLAQTQENHGIKLLSERREIRRAGFILITTDKGLCGGLNANVLKKFLAQMQDYQERGIETDVVCIGSKGLATCQRIGLNVIASVVNLGDTPRLELLVGSLTELFKRYEQNEIDIIHIVYSGFVNTMRQEPRMEVLLPIGRNTLEAAQVEGRGYNWDYRYEPTPVAVLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAAITTELSEIVAGAAAV
>NZ_CP031255.1|WP_107854651.1|418895_420443_+|F0F1-ATP-synthase-subunit-alpha
MQLNPAEISELLKAKIENLDTKQEIHTRGTVISVTDGIVRVHGLSDVMQGEMLEFPNNTFGLAMNLERDSVGAVVLGEYEHIKEGDEVKCTGRILEVPIGRELVGRVVNALGQPIDGKGPIDTKLTAPIEKIAPGVIARQSVDQPMQTGVKAIDSMVPIGRGQRELIIGDRQTGKTAVALDAIVNQKGTGVVCIYVAVGQKASSIANVVRKLEEYGAMEHTIVVAATASEAAALQFIAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARINADEVEKLTGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRELAAFSQFASDLDEATRKQLQHGEVVTELMKQKQFSTLNTAEMALTLWAINEGSYGNVPVSKALSFEAEFLSYVRTQYPKVLESINETGAMSDDNEKALTEAMKSFKASYAHTA
>NZ_CP031255.1|WP_114921546.1|433051_433795_-|oxygen-insensitive-NADPH-nitroreductase
MTLNSRPALQTALAHRSIRRFTAEPVSDEMLSAVLEAARASSTSSYLQNGSIIRVTDIAVRKELRAVCAAEGGAGHAYVEHCAEFLVFCIDAARHHALDDAVQTDWTEVLLIGAIDAGIMAQNMVLTAESLGLGAVYIGSIRNDIARVGELLGLPEHVVPLFGVCLGHPDQDPLQRPRLPLETLVSENRYRPAAKTVLEDYNETVKTYYRERSGKDLDWAQQVRNTLGRPVRPFMLDYLRKQGFAKR
>NZ_CP031255.1|WP_114921547.1|434080_435265_+|5-demethoxyubiquinol-8-5-hydroxylase-UbiM
MNRHSDIVVVGAGPAGLSFARTLADSGLRITIVEKSPLESISNPAYDGREIALTHLSKEIMECLGMWQRVPENEIYPLRDAKVWNGSSSYQLHFPQPTQARGGATDRLGNLISNHNIRKAAYDAVAEQDNVTLLAGVGVKEARTDADGAYITLDNGEELTARLLVAADSRFSQTRRQIGISADMHDFGRTVIVCRFKHEISNCHTAVEFFQYGRTLALLPLEEHLTNCVITIDSDKAGALLAMSPEELAADLEKQLKNKLGKMEKTGTLHTYPLVGVHARRFCTTRAALIGDAAVGMHPVTAHGFNLGLESADILGKLVMQAAQNGQDIGASSLLERYDAKHQLHTRPLYHGTNAMVKLFTNEAAPAKLLRNLVLRVSNNLPPVKKLITRQLTG
>NZ_CP031255.1|WP_114921548.1|435356_435884_+|hypothetical-protein
MLLTRLAALCLTAALCACGGTQTETPSQPEKPAAAPTSEASAFPAVPSENTAAASWKTAAEFRAPNGLRYLYVVIDTPATRDDLIAVAGDIHRKEPDAWLFLLDAEEKIPEMLAANRSGDMSSFPAEWVKQHLSGSTSLMLMPDGKRRWAVFEGQSRSEPIAELPCIEGQGMCTD
>NZ_CP031255.1|WP_107971686.1|435970_437080_-|AI-2E-family-transporter
MAGPDCMPNEKIDMTTRIPADTPKLRTVSYFLTAAALLAVLHFHFLPLLLSVILTYIFITRTNGLILWFRRRLFRRNAFLRRSLNAHNVNLLSATLTIGLVLLAIVLMAFGVYHLIQGGHIAVMMGKLAAIIEDTKNSADLPASVANMLPNNLAEIKTAAAGLLKEYGDTLTRISKNSLTVFVYIIIGVIVGALLSFHRLNARMKRRRMPPFKAELVRRIVNFQSSFERVFIAQVKISLIDTAVTAVYLYLILPAFGVELPFRLTVLVIAFVVGLVPVAGNLVSNTVIIILSLGASLYVAVASLVFLVVVHKLEYFLNAKIIGSEIESSAWELLLVMVVFERIFGIGGIIIAPVYYAYLKNELKQAGLI
>NZ_CP031255.1|WP_107854666.1|437347_438835_-|NTPase
METQTLEKPTFDTQDEFKRKPIAENIIRLLTSDIDLSPMVIDGGWGTGKTEFCQKLIRLMQQQHPDYQPVYIDAFRSDHSGEPLLALLAEIIKACTPEDTGEQPSEQRKEMAKKVAKAAGFVMKTVAKAAVGHVLKQNMEDLAEGMSQIINDNQEAKNAAATVAGAATTLASHSIDATIDATVETLLKEQIEAEKNLETLKACLKEFAEEKPIILFIDELDRCRPDYAVDMLEVIKHVFDVENVKVVLVTNTKQLRAAINHRYGMEVDAQKYLDKFLKYSFALPDKVVARFEEDRALAAVEHFKQLIRKSHICNELQGLIYESPENISFINFIGDMIARHDISLRETERFVRFLEIYHSLSQGLNINKSVPQVILLRITGVFIFCFHSDLIASINKNRTDAKDFARLFNVQSWPDTPIESYGFNCADIIAVMLIKHSKIEDARFQEWEDKEYWQTYIDHHFFKNKYIVSQKRGIYGVLSILKETFQVLNLEQTPQ
>NZ_CP031255.1|WP_114921549.1|439186_440194_-|IS5-family-transposase
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRGHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDKTLSELLELINRQLTEKNLKIEKASAAVIDATIIQTAGSKQRQAIEVDDEGQVSGQTTPSKDKDAHWTKKNGLYRLGYKQHTRTDEEGYIEKLHITPANTHECNHLSPLLEGIAEGTTVYADKGYDSAENRQHLKEHRLLDGIMRKAHRNRPLTEAQPKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSVPVAA
>NZ_CP031255.1|WP_114921550.1|440326_442222_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIETLGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQADRILYKAAIREMLENQENLELFQQSVDDVTLDGDRISGVMTAMGVEFKARAVVLTAGTFLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQLTEQPGDTPVPVFSVRGNADMHPRQVSCWITHTNLQTHEIIRSGFDRSPMFTGKIEGVGPRYCPSIEDKINRFADKDSHQIFLEPEGLATNEYYPNGISTSLPFDIQIALVRSMKGLENAHILRPGYAIEYDYFDPRNLKASLETKTIQGLFFAGQINGTTGYEEAAAQGLLAGANAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMRLTEDGYKIGLVGEEQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSREANLHDLLRRPNLDYAALMTLEGARSSENLSAEVIEQVKIQVKYQGYIDRQNEEIDSRRDIEALKLPNDIDYAKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLKRGFKGAK
>NZ_CP031255.1|WP_114921551.1|442385_443267_-|EamA-family-transporter
MFYQILALLIWSSSFIAAKFAYTMLDAALMVQARLLISVLIVLPVCRRYLDKIPKDKWKPLLWLSFLNYVAVLMLQFIGLKYTSAASAETVIGLDPLLMVFIGHFFFRDKAEWYHWLCGLTAFAGVVIMIAGGHSGGNIGFWGCLMIVAGSAVFCSITRPTQNLIADIGAPAYTSLSLAVSAVMCLPFSLLLAENYQINWSWSGGIALLYLGICCSWFGYWLWNKGMSRVPANLSGLLLTLEPVFGILMAVIVLDEYISTVSGLGMMIVVASAFAAVVLPKVLPKRPENGKAA
>NZ_CP031255.1|WP_107855426.1|443532_444114_+|DUF1415-domain-containing-protein
MNDIAATAAEHTRIWLEKAVIGLNLCPFAKAPHVKNRVRIAVSTAKHTDGFLEDLDRELALLADSPPDELETTLLVHPSLFTDFMQFNDMLDFADQAVIDNGLEGIIQIAPFHPDFRFEGTEADDIGNYTNRSPYPTLHLIREDSIAKAAEAFPDAEAIFGRNIALLEKMGKSGWDALEIPQGCPFHKAEDNK
>NZ_CP031255.1|WP_107971574.1|444110_444473_+|YbaN-family-protein
MILRWLFWTAGAVSLLLGVIGIVLPVLPTTPFVLLAAACWARASPRFHSWLHRHPYFGPMVQNWEEKRAVPRRAKYLAYTMMTASCLMMLYRFPDQWWITAGAAAICLASAVWMSRLPDA

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Crispr_ID: NZ_CP031255_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031255_2

1706525-1708317

TypeI

Consensus_repeat	Method
GTTTCAACACACAGCCGCC	CRT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	CRISPRCasFinder
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	PILER-CR

27 spacers

cas2,cas1,cas4,cas7,cas8c,cas5

The CRISPR arrays of NZ_CP031255_2

>merge|NZ_CP031255|2|1706525-1708317|CRT,CRISPRCasFinder,PILER-CR
GTTTTAATATACAGCTGCCAATACATTTTCACGCCACTTCAGAATTTCAACACACAGCCGCCTGAAGGCGGCTGGGACACCCAACAAACATCCCTGCCCGCAAAGGCAGGGTTTCAACACACAGCCGCCTGAAGGCGGCTGGCCGCTGGCCGACGTGCTGATACACAGCGGCCTTGTTTCAACACACAGCCGCCTGAAGGCGGCTGGGCCCTTGCGTGTGATGCCGAAGCCGAAAATGTCATAGTTTCAACACACAGCCGCCTGAAGGCGGCTGGGTTGCAATGCCATTCATGGCATGAAGCGTGTATTGTTTCAACACACAGCCGCCTGAAGGCGGCTGGGGCGACAACCGCACATACCGCCCGCGTTCGGCGTCGTTTCAACACACAGCCGCCTGAAGGCGGCTGGCTGATTGCCGGCAGGCTGCATCAGGCGGTGGATGTTTCAACACACAGCCGCCTGAAGGCGGCTGGCGAAAAATTGCATTAACTAAAGGATATTGATATGTTTCAACACACAGCCGCCTGAAGGCGGCTGGGTCGCCGAACAGGCAACGTTGGTCTTGCTTGTCGTTTCAACACACAGCCGCCTGAAGGCGGCTGGGATGGTATCCCCCATCCGTTTATGGCGGATGGAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGTCAAGATTCCTGTGCATACTCGACCCATTGTCTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGGCGGGGAACTAAAAATCCGGTTGACTACCGTTGAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGTGCCGATAAAAAACATCTTAGCGTATTCAACATTGTTTCAACACACAGCCGCCCGAAGGCGGCTGGATGTAACCATCAACATCTCCCAACTCCGATTGAGGTTTCAACACACAGCCGCCCGAAGGCGGCTGGGTACATGGACTAACATCTGTCTACAACTACACATTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGGCTTATCAAACACTTTGAACTCTTTAAAATTCAAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGATTTGTTTGTACTGCACTGGAAACTTTGCTTTTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGGATTCCGTTTCCGCCGCTGTATCAGGAATCGGCTGTTTCAACACACAGCCGCCCGAAGGCGGCTGGGAACAGCAAAACGCTTAAAAATATGAACATAGAAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGGAAGAGGAAGAGCCTTCAGGAATAGTAAAGCCTGTTTCAACACACAGCCGCCCGAAGGCGGCTGGGGAGTGAAGTAAAAATTCTGATGAAGTGCCAAAATGTTTCAACACACAGCCGCCCGAAGGCGGCTGGAATATAAAACAGGCGCAAGTTTGGCGATTACAGGGTTTCAACACACAGCCGCCCGAAGGCGGCTGGACTCTCATTCTATTACGGCATTTCGCCGACACTTGTTTCAACACACAGCCGCCCGAAGGCGGCTGGGCCAAACAAGCAAAATACAAACATGGCCTGACGGGTTTCAACACACAGCCGCCCGAAGGCGGCTGGTAAGCAGTATAATTTTAAAAATTGAGGTGATTTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGTATGTCAACAGTTTTTTTGAAAAATAATTTATGTAGTTTCAACACACAGCCGCCCGAAGGCGGCTGGATTATCTGTCAGAACAATTGACCCCGACATGAATGTTTCAACACACAGCCGCCCGAAGGCGGCTGG

>NZ_CP031255|2|2|1706525-1708304|CRT
GTTTTAATATACAGCTGCC	AATACATTTTCACGCCACTTCAGA
ATTTCAACACACAGCCGCC	TGAAGGCGGCTGGGACACCCAACAAACATCCCTGCCCGCAAAGGCAGG
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGCCGCTGGCCGACGTGCTGATACACAGCGGCCTT
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGGCCCTTGCGTGTGATGCCGAAGCCGAAAATGTCATA
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGGTTGCAATGCCATTCATGGCATGAAGCGTGTATT
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGGGCGACAACCGCACATACCGCCCGCGTTCGGCGTC
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGCTGATTGCCGGCAGGCTGCATCAGGCGGTGGAT
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGCGAAAAATTGCATTAACTAAAGGATATTGATAT
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGGTCGCCGAACAGGCAACGTTGGTCTTGCTTGTC
GTTTCAACACACAGCCGCC	TGAAGGCGGCTGGGATGGTATCCCCCATCCGTTTATGGCGGATGGA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGTCAAGATTCCTGTGCATACTCGACCCATTGTCTT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGCGGGGAACTAAAAATCCGGTTGACTACCGTTGAA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGTGCCGATAAAAAACATCTTAGCGTATTCAACATT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGATGTAACCATCAACATCTCCCAACTCCGATTGAG
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGGTACATGGACTAACATCTGTCTACAACTACACATTT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGCTTATCAAACACTTTGAACTCTTTAAAATTCAAA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGATTTGTTTGTACTGCACTGGAAACTTTGCTTTTA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGGATTCCGTTTCCGCCGCTGTATCAGGAATCGGCT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGGAACAGCAAAACGCTTAAAAATATGAACATAGAA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGGAAGAGGAAGAGCCTTCAGGAATAGTAAAGCCT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGGGAGTGAAGTAAAAATTCTGATGAAGTGCCAAAAT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGAATATAAAACAGGCGCAAGTTTGGCGATTACAGG
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGACTCTCATTCTATTACGGCATTTCGCCGACACTT
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGGCCAAACAAGCAAAATACAAACATGGCCTGACGG
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGTAAGCAGTATAATTTTAAAAATTGAGGTGATTTA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGTATGTCAACAGTTTTTTTGAAAAATAATTTATGTA
GTTTCAACACACAGCCGCC	CGAAGGCGGCTGGATTATCTGTCAGAACAATTGACCCCGACATGAAT
GTTTCAACACACAGCCGCC

>NZ_CP031255|2|2|1706568-1708317|CRISPRCasFinder
ATTTCAACACACAGCCGCCTGAAGGCGGCTGG	GACACCCAACAAACATCCCTGCCCGCAAAGGCAGG
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	CCGCTGGCCGACGTGCTGATACACAGCGGCCTT
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	GCCCTTGCGTGTGATGCCGAAGCCGAAAATGTCATA
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	GTTGCAATGCCATTCATGGCATGAAGCGTGTATT
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	GGCGACAACCGCACATACCGCCCGCGTTCGGCGTC
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	CTGATTGCCGGCAGGCTGCATCAGGCGGTGGAT
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	CGAAAAATTGCATTAACTAAAGGATATTGATAT
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	GTCGCCGAACAGGCAACGTTGGTCTTGCTTGTC
GTTTCAACACACAGCCGCCTGAAGGCGGCTGG	GATGGTATCCCCCATCCGTTTATGGCGGATGGA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	TCAAGATTCCTGTGCATACTCGACCCATTGTCTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	CGGGGAACTAAAAATCCGGTTGACTACCGTTGAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	TGCCGATAAAAAACATCTTAGCGTATTCAACATT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	ATGTAACCATCAACATCTCCCAACTCCGATTGAG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	GTACATGGACTAACATCTGTCTACAACTACACATTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	CTTATCAAACACTTTGAACTCTTTAAAATTCAAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	ATTTGTTTGTACTGCACTGGAAACTTTGCTTTTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	GATTCCGTTTCCGCCGCTGTATCAGGAATCGGCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	GAACAGCAAAACGCTTAAAAATATGAACATAGAA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	GAAGAGGAAGAGCCTTCAGGAATAGTAAAGCCT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	GGAGTGAAGTAAAAATTCTGATGAAGTGCCAAAAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	AATATAAAACAGGCGCAAGTTTGGCGATTACAGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	ACTCTCATTCTATTACGGCATTTCGCCGACACTT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	GCCAAACAAGCAAAATACAAACATGGCCTGACGG
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	TAAGCAGTATAATTTTAAAAATTGAGGTGATTTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	TATGTCAACAGTTTTTTTGAAAAATAATTTATGTA
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG	ATTATCTGTCAGAACAATTGACCCCGACATGAAT
GTTTCAACACACAGCCGCCCGAAGGCGGCTGG

>NZ_CP031255|2|2|1706569-1708317|PILER-CR
TTTCAACACACAGCCGCCTGAAGGCGGCTGGG	ACACCCAACAAACATCCCTGCCCGCAAAGGCAGGG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGC	CGCTGGCCGACGTGCTGATACACAGCGGCCTTG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGG	CCCTTGCGTGTGATGCCGAAGCCGAAAATGTCATAG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGG	TTGCAATGCCATTCATGGCATGAAGCGTGTATTG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGG	GCGACAACCGCACATACCGCCCGCGTTCGGCGTCG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGC	TGATTGCCGGCAGGCTGCATCAGGCGGTGGATG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGC	GAAAAATTGCATTAACTAAAGGATATTGATATG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGG	TCGCCGAACAGGCAACGTTGGTCTTGCTTGTCG
TTTCAACACACAGCCGCCTGAAGGCGGCTGGG	ATGGTATCCCCCATCCGTTTATGGCGGATGGAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGT	CAAGATTCCTGTGCATACTCGACCCATTGTCTTG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGC	GGGGAACTAAAAATCCGGTTGACTACCGTTGAAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGT	GCCGATAAAAAACATCTTAGCGTATTCAACATTG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGA	TGTAACCATCAACATCTCCCAACTCCGATTGAGG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGG	TACATGGACTAACATCTGTCTACAACTACACATTTG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGC	TTATCAAACACTTTGAACTCTTTAAAATTCAAAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGA	TTTGTTTGTACTGCACTGGAAACTTTGCTTTTAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGG	ATTCCGTTTCCGCCGCTGTATCAGGAATCGGCTG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGG	AACAGCAAAACGCTTAAAAATATGAACATAGAAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGG	AAGAGGAAGAGCCTTCAGGAATAGTAAAGCCTG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGG	GAGTGAAGTAAAAATTCTGATGAAGTGCCAAAATG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGA	ATATAAAACAGGCGCAAGTTTGGCGATTACAGGG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGA	CTCTCATTCTATTACGGCATTTCGCCGACACTTG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGG	CCAAACAAGCAAAATACAAACATGGCCTGACGGG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGT	AAGCAGTATAATTTTAAAAATTGAGGTGATTTAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGT	ATGTCAACAGTTTTTTTGAAAAATAATTTATGTAG
TTTCAACACACAGCCGCCCGAAGGCGGCTGGA	TTATCTGTCAGAACAATTGACCCCGACATGAATG
TTTCAACACACAGCCGCCCGAAGGCGGCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031255.1\|WP_114922174.1\|1711692_1712340_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP031255.1\|WP_114922169.1\|1702865_1703687_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP031255.1\|WP_003685729.1\|1708506_1708800_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP031255.1\|WP_114922168.1\|1699400_1701905_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP031255.1\|WP_114922165.1\|1694689_1695613_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031255.1\|WP_114922173.1\|1709917_1711672_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226121
NZ_CP031255.1\|WP_114922171.1\|1705163_1705868_-\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|180148
NZ_CP031255.1\|WP_114922179.1\|1717259_1717757_-\|TIR-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP031255.1\|WP_114922176.1\|1713233_1715015_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP031255.1\|WP_114922172.1\|1708874_1709888_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP031255.1\|WP_107853758.1\|1704363_1705080_-\|phosphoglycolate-phosphatase	unknown	unknown	gnl\|CDD\|319854
NZ_CP031255.1\|WP_114922167.1\|1697934_1699401_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP031255.1\|WP_114922178.1\|1715762_1717220_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375615
NZ_CP031255.1\|WP_003771718.1\|1705887_1706367_-\|S-ribosylhomocysteine-lyase	unknown	unknown	gnl\|CDD\|179399
NZ_CP031255.1\|WP_114922177.1\|1715011_1715686_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP031255.1\|WP_114922175.1\|1712355_1713222_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP031255.1\|WP_114922180.1\|1717769_1718387_-\|TIR-domain-containing-protein	unknown	unknown	gnl\|CDD\|378100
NZ_CP031255.1\|WP_114922170.1\|1703833_1704283_-\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646
NZ_CP031255.1\|WP_114922694.1\|1695605_1696808_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|378394
NZ_CP031255.1\|WP_114922166.1\|1697359_1697911_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP031255.1\|WP_114922174.1\|1711692_1712340_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.94052e-42
NZ_CP031255.1\|WP_114922169.1\|1702865_1703687_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	1.48672e-135
NZ_CP031255.1\|WP_003685729.1\|1708506_1708800_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.4759e-31
NZ_CP031255.1\|WP_114922171.1\|1705163_1705868_-\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	6.07725e-111
NZ_CP031255.1\|WP_114922168.1\|1699400_1701905_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	5.00821e-83
NZ_CP031255.1\|WP_114922173.1\|1709917_1711672_-\|AAA-family-ATPase	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	1.17265e-28
NZ_CP031255.1\|WP_003771718.1\|1705887_1706367_-\|S-ribosylhomocysteine-lyase	gnl\|CDD\|179399	PRK02260, PRK02260, S-ribosylhomocysteine lyase.	2.19849e-80
NZ_CP031255.1\|WP_114922179.1\|1717259_1717757_-\|TIR-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	1.76185e-06
NZ_CP031255.1\|WP_114922176.1\|1713233_1715015_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NZ_CP031255.1\|WP_114922172.1\|1708874_1709888_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP031255.1\|WP_107853758.1\|1704363_1705080_-\|phosphoglycolate-phosphatase	gnl\|CDD\|319854	cd16417, HAD_PGPase, Escherichia coli Gph phosphoglycolate phosphatase and related proteins; belongs to the haloacid dehalogenase-like superfamily. Phosphoglycolate phosphatase (PGP; EC 3.1.3.18) catalyzes the conversion of 2-phosphoglycolate into glycolate and phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.5866e-107
NZ_CP031255.1\|WP_114922167.1\|1697934_1699401_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	5.07347e-25
NZ_CP031255.1\|WP_114922178.1\|1715762_1717220_-\|hypothetical-protein	gnl\|CDD\|375615	pfam18185, STALD, Sir2- and TIR-associating SLOG family. Family in the SLOG superfamily, associating with predicted Sir2- and TIR-like effector domains. Members of this family are predicted to functions as sensors of nucleotide or nucleotide-derived ligands, which are likely processed or modified by the associating effectors.	8.76664e-95
NZ_CP031255.1\|WP_114922177.1\|1715011_1715686_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.26527e-117
NZ_CP031255.1\|WP_114922180.1\|1717769_1718387_-\|TIR-domain-containing-protein	gnl\|CDD\|378100	pfam08937, DUF1863, MTH538 TIR-like domain (DUF1863). This domain adopts the flavodoxin fold, that is, five parallel beta-strands and four helical segments. The structure is a three-layer sandwich with alpha-1 and alpha-4 on one side of the beta-sheet, and alpha-2 and alpha-3 on the other side. Probable role in signal transduction as a phosphorylation-independent conformational switch protein. This domain is similar to the TIR domain.	2.46988e-20
NZ_CP031255.1\|WP_114922170.1\|1703833_1704283_-\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	9.86325e-43
NZ_CP031255.1\|WP_114922694.1\|1695605_1696808_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|378394	pfam10106, DUF2345, Uncharacterized protein conserved in bacteria (DUF2345). Members of this family are found in various bacterial hypothetical proteins, as well as Rhs element Vgr proteins.	5.05597e-51
NZ_CP031255.1\|WP_114922175.1\|1712355_1713222_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	8.4077e-153

>NZ_CP031255.1|WP_003771718.1|1705887_1706367_-|S-ribosylhomocysteine-lyase
MSEIQIEKKMNVESFNLDHTKVKAPYVRLACVTDGDFGDKIYKYDLRVCQPNQEHMEMPSLHSLEHLMAELSRNHSDKIVDISPMGCQTGFYIALLNMGDYDEVLQLIENTLKDVLSATEVPACNVVQCGWAASHSLEGAQQIARGLLDKRGEWPQVFA
>NZ_CP031255.1|WP_114922171.1|1705163_1705868_-|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MSAIRTIAVIGAMQPEIELLKGRLNNRESHRFGAFEIHCGELHGKRIVLTLSGIGKVNAAAATATAILKFSPDCVINTGSAGGLGQGLKVGDVVIGSETAHHDVDVTAFGYAIGQVPQLPPAFASDHALVTAAERAAVAFPNAAVRRGLIVSGDRFVHSSEAVAAIRKNFPDVQAVEMEAAAIAQTCAQFGLPFVVIRAVSDAADEKADVSFDEFLQTAAVHSAEMVDGMIREL
>NZ_CP031255.1|WP_107853758.1|1704363_1705080_-|phosphoglycolate-phosphatase
MNGTIEHVQAAAFDLDGTLCDSLPDLAAAANAMRASLDLPPLPQPTVESYVGDGIAVLVHRALTGNVDGRAEEELWAQGFTLFVQYYAEHIADRTRAYPETEAGLGLLKSLGIPLAVITNKNEVLAVKLLEALGLSDYFSLVLGGDSLPEKKPSPAPLLHAAEVLGVPVENMIMVGDSRNDILAAKAAGCPSIGVTFGYGDMAELSKHEATRPDWTIGSLPEIYENLRPQREEKEKAV
>NZ_CP031255.1|WP_114922170.1|1703833_1704283_-|recombination-regulator-RecX
MNPQKTLRARALDILSRQEISRAELKRKLAPHAESEEEIERVLNEFTDRRWQSDERYAEAYIHSKSRKHGSLRLKQALAQKGVDEETVCAFLPDRDNELASAVEVVRKKFKHPPADYAEKLKQMRFLAYRGFDGDTVQTALRQAWTEEE
>NZ_CP031255.1|WP_114922169.1|1702865_1703687_-|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MAHYAIGDVQGCFDELEALLAKIGFNHGSDTLWLTGDIVNRGPKSLESLKFCMKHEDSVQIILGNHDLHLLAVLYGHGTMKKRDTIEPIVKHKHADKMRDWLRHQPLLVQKDSYLMVHAGLLPQWTAAQAAEFAREVEHSMRRSKHGESFAEMYGNKPAAWSEDLRGADRLRLLVNVFTRMRALNADGSLDYDFKSTPSEMPPHLHAWFDAPNRRHLDHTIVFGHWSALGLLDSAEKKVLALDTGALWGGCLTAVNLADHSIVQEAAHGRLDW
>NZ_CP031255.1|WP_114922168.1|1699400_1701905_-|type-VI-secretion-system-tip-protein-VgrG
MTARQSYHLTFARFSPSLSVKSFTASEAANTAYRVEITATSTDSSLPLSSYLNQRAAFEIRPQEAVLSEVVSAFGSASDDPPAKQWQGIVTSCEKLSVSKDETVYRFVLEPRFAALKHFQTSRLFQNQTVPDIVAAVFKHHGFSGVDYRFQKSRSYTVREYVTQYLESDFAFINRLCEEEGIWYAFEQHGQHGDVVVFGDSPEHYLRSQGLSVSYRPHAGLESVGTEALFNLSIRHNPIVEGIRSADYNYRSADTDLFAETDNKQSEESADNTVLLGKQQHWGLHPKTPDEAEVQTTLLNEAVLCRQTVANGSGNVVSMAPMKVFQTDTAFPEAPDGWLVLSMEHSGSRDSAYSHTFTAIPAQHTFRPERSTPRPHIAGTLPARVTAAENCTYAYIDDMGRYRVKLPFDLDEWSPGGESRPVRLAKPYAGPEYGIHFPLHEGTEVMLSFVQGNPDRPYISGVMHDSAHPDHIPADWNTRNVIRTWANNKLRMEDLQGQEHIKLATDYQKSQLNLGHIVDSGRAKRGENGEGFELRTDGWGAVRAGKGILVSAQNQDANGKVLDMDDAIAQLEQALSLAKSLNKAAQTANNHNTDEATQRGRLKDALKDLKEAGLIQTAPAGIATATQQSQLHTANENIHLISGSHTDISAGQSLTAHAAEGLNLFAQSQGIKVQANQGAVTVQAQNDELQLNALKDATLTSSTGKITIAAKEEILITCKGAYIKLSNGEVEIGSPKVVRVRAPLVVSESKGINYPLQNIPPLQIFSNKLDLYDIFGFSEEKIPFTVIGNKGRESQHGILDKMGRTDRLYSDTAETVKIFAGNAALLPGEESEEK
>NZ_CP031255.1|WP_114922167.1|1697934_1699401_-|LysM-peptidoglycan-binding-domain-containing-protein
MAQYRFEFLDADRKPIAKCHYQIMQYDATLRKDVADENGRAAFDSELIAGKKIWVRFWAQGQRQDAAFSTQPFYWAENVITQPIMAPRVYEIKLRETENKNNESEDYRQAFYEVQAGDTWEGIAQKCNTNVSLIKFINNLPDDGTPPEVGDALLLPRGAERPLDSGGRPDKGVIESQPSDPLDDLLKGLDGKTPEQKKDDQPILPQGAEPVGQGQPAQPAGKNPPPDEGKPVEEKPDIQEGRGRNGRPTDRVIPKQQPSAIPNLITMEQMKGMWPLVSQSKMRPILDELNANLTDYKLDTNLRKAHFFAQVMQEVGPHFKLREDLHYGAKALLRFSYYQKHPSEATTDANLSPFSLKEKTIANKAYMDKWRSRRYKLGNIYEGDGYKFIGRGLKQTTGRSNYTDLNNVYPLAWPGENLNFLEHPELLETPKYAVRSAIAFWKGKKLYELADKGFNANTIDSITRVMNEATNSYPQRRANFSTTIKIFR
>NZ_CP031255.1|WP_114922166.1|1697359_1697911_-|hypothetical-protein
MRIFLIYIFLYLLPRVCIGENIDFDKYNHQTCSYLNNKLSILKKNDALFSSSYCIDDGEEIINNSILIGGKKYELRDFKKTEIISRRINLEAISIYKVNKNYPLLIILFSEEFCCYPQLEGKNYRIYLYKIYEDKKNNEFKFISSDHILGENVSGFDGISDKRMIFRLRNIKEIKKYLKMGLS
>NZ_CP031255.1|WP_114922694.1|1695605_1696808_-|type-VI-secretion-system-tip-protein-VgrG
MLSFVQGNPDRPYISGVMHDSAHPDHIPADWNTRNVIRTWANNKLRMEDQKGQEHIKLATDYQKSQLNLGHIVDSGRAKRGENGEGFELRTDGWGAVRAGKGILVSAQNQDANGKVLDMDDAISQLEQALSLAKSLNKAAQTANNHHTDEATQRGRLKDALKDLKEAGLIQTAPAGIASATQQSQLHTAGEDIHLVSGNHTDISAGQSLTAHAAESVNLFAQSSGIKVQANQGKVEVQAQNDELQLNALKDATLTSSSGKITIAAKEEVLITCKGVYIKLANGEVEIGSPKVVRVRAPLVVSGSNSANYPFFRIMGACSHRFQIKNNDTGEIEKDFPYLLRYKKEYFFGYSDNSGFTDRIYTEVPEEVEIFIGRNALLKYFEIENNCSIEDYYIGVKDNE
>NZ_CP031255.1|WP_114922165.1|1694689_1695613_-|hypothetical-protein
MSNQRCITEDSHPVTQIKDFDCGCKYSTQFETTRYKQKYGPIYKGTKYLHETDIFKLMLNDGSLSNEYALIIEAMAPNEARYDAVQAYDSEAVTAGAMQKTINSIGTGELPVQMKKFKDNYPLEFKKYFENCGWSLQVKNNKEVQAFFTHERLTQGKPITGRELKALCRHGYTSYTRTPIPNIPLAPFVATMKSSNYVRLQITDFIERIKLANNKVDNSFKTSLGMAFVLDYDVNRPAYVQGAFRKALNEYIRSGGIPIQNWPSNINERKNYEYKLLDIYARHRETYGGQPMTNSKSRYNRLKEILK
>NZ_CP031255.1|WP_003685729.1|1708506_1708800_-|CRISPR-associated-endonuclease-Cas2
MLMLITYDISLEDAEGQARLRRVAKLCLDYGVRVQYSVFECDIAPDQWVVLKDKLLKTYNPETDSLRFYHLGSKWRRKVEHHGAKPAVDVFKDTLIV
>NZ_CP031255.1|WP_114922172.1|1708874_1709888_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKLQNTLYITTQGSYLHKERETLVVEQERKKVAQLPVHSIGHIFCFGNVLVSPFLLGFCGENNVNLAFFTENGRFLGRLQGRQSGNVLLRRAQYRVSEQNPVPIARNIIAAKIQASKRVLQRQIRNYGENAAIQSAVDTLNISLRQLKGAAELDVVRGLEGDAAARYFGVFGQLLSEKSGFTFDGRNRRPPRDGVNALLSFVYSILGKDISGALQGVGLDPQVGFLHADRPGRDSLAQDILEEFRAWWADRLVLSLINRGQIKPQDFFTEASGAVSLKAEARKLLFQALQAKKQEKIVHPFLGEEVEIGLLPYIQAMLLARHLRGDLAEYPPFLMR
>NZ_CP031255.1|WP_114922173.1|1709917_1711672_-|AAA-family-ATPase
MKIKTLEIKNWRSIKELKITAQDLMIIIGQNNHGKSNLLSAILFFFGEIKHQDLDFSQGAEELFVDIEFSELDEQDKRTFERYVTQQETIKVRKIAYLGGNFEYKGWIQNCSEDYLKEEKAGNYTSRETANSLPFHPYLPSTGRLSKQQIIEAQQKYIQSNIENLTFSYELEETNFMGLRSVAKGIFGEVYFLPAIKNAADDFASKDTSVFSKLLGEVVGTMSQYNEDWQRAKQQLAKLFSKFSKYIDGVKNEERPKQLSDLESDLSKELLSWNACFDIELNIPDIDSFLKSNASVWINDGTRTDIARKGHGLQRAVTIALIQLIAKRQLQSNQDSEITSRKVSKSRYFIFEEPELYLHPQAQRTLFDSFVDLSNTGSQVILCTHSSNLINIDRYKSIYIVKKEDEQTGSKITQCEDDLFNGDEQDNWNLSYWINPDRSELFFSEKVILVEGATDKIVIPVLAKQLGVFKHGNTIIDCGSKGNIPLYLKLLNKFKIKYVAVYDQDHQESKSQDDKNVATKLTNKILSSIENELGQAIMLINDIEEELGYVSSKSGKPFKALQYIKSDTFQLSSSLEEKIKKIYQ
>NZ_CP031255.1|WP_114922174.1|1711692_1712340_-|CRISPR-associated-protein-Cas4
MTALLAEIQRENQDTRLIPLSALQHYAFCPRQCALIHNEQAWAENYLTAQGKALHERVDSGEPETRKGVRFERTVHVSAEKLGISGVLDLVEVDTKTGRLKPVEYKRGKPKPDPMDEIQLCAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDDLRTQTLATIAAVRELLNSGQTPLPDYSKRCKACSLVEICQPELLGKRDRSVGYVVGLFE
>NZ_CP031255.1|WP_114922175.1|1712355_1713222_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSAIQNRYEFVYFFDVTNGNPNGDPDAGNMPRLDPESSKGLVTDVCLKRKIRNFVEISSENEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKDEAKARDITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIVPLEVSITRMAVTNEKDLEKERTMGRKYIVPYALYRVHGFISANLAAKTGFSDDDLAKLWQALMLMFEHDRSAARGEMAARKLIVFKHDSALGSQPAHKLFDAVKVERVNGESGTPASGFGDYKISVVSDDLNGVSVEELL
>NZ_CP031255.1|WP_114922176.1|1713233_1715015_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILASLARYYRRLAAENDEMGNPKVPPYGFSEEKIGWILVLDKEGRLKTVVPNLTADKKPQPKLMSVPQSFKRPGTTPKPFFLWDKTSYALGVEANKNKAEVKENPFTSSEKTFDAFKQYHLDLLQNSEDEGLQALCRFLQNWQPAHFAAENLPVEMLDANIAFSLEKPTALIHKREAAQSLWAGCLKSDEALEGLCLISGDTAPIARLHPAIKGVFGGQSSGGSIISFNKEAFASFGKEQGANAPVSEQSAFAYTTALNYLLRRENNHCLTIGDASTVFWAEADDNATAQATEGFFAQVFTPPDDEQESAKVFNVLEQIGKGRPLQEIAPELSANTRFYILGLAPNAARISVRFWLDTTFGQLAENLAQHWQDLALEPCAWKTPPSIWRLLLQTAVLGKSENISPVLAGEMTRAVICGTPYPLSLLSQLITRIRADGDVNGLRVAMMKAVLERRFRKGFIEEGVPMSLNNESPNRAYLLGRLFAVLERIQYQALGELNAGIADRYYGSASAVPFSVFPRLLSGAKHHLSRLRKDKAGMAVNLDKDLGEIIAKLPETFPRHLSIDEQGRFAIGYYHQKQSYFAKKETAETIEN
>NZ_CP031255.1|WP_114922177.1|1715011_1715686_-|type-I-C-CRISPR-associated-protein-Cas5
MNQIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVHWKPAIRWVIDRIYVLKPIRFESVRRNELGGKISAGKVSGAMKRKSVADLYTLIEDDRQQRAATVLKDVAYVIEAHAVLTAKAGADETVTKHIEMFKRRAKKGQCFQQPCLGVREFPADFALIDEGEPLPPSALVESEANRDLGWMLHDIDFDHGNTPHFFRAEMKDGVIDVPPFYAEEVKA
>NZ_CP031255.1|WP_114922178.1|1715762_1717220_-|hypothetical-protein
MFIGVAMEFTKEQKKFITDFVVEIKNGDAAIFAGAGLSAPAGFVNWKGLLKDLAEELGLDIEKEHDLIGVAQYHFNRHKRGKINNKIINEFTTLRQGGDNHKLLSKIGISTFWTTNYDQLIEKTLEADGKTVEKKIRNEDFSRNIKKKDAIVYKMHGDKDSPDEAVLIKDDYETYQDKKELFATALRGDLLSKTFLFIGFSFDDPNLEYILGRIKVLLKDNTPTHYCFFKEVSRDDFHDDESYMYAKVKQELKIEDLKRYGIHSIMIKEYSDITAILKEIQRRLKRSNIFISGAAHSYSPFSEEKAKELIHNLSYKLAEKEYKIISGYGLGIGSIVINGALEYKYQSNYRNLDDLLILRPFPQIQSGDKSISKRWTDYRNEIISQAGIAIFMFGNKLDKHGEIVLSNGMKEEFEICLQHNVIPIPIGCTGSMSEELWNDIMENRTELYFNDQSLIDEIKKLGQSNISNDGIISTVLSIIDKLQNM
>NZ_CP031255.1|WP_114922179.1|1717259_1717757_-|TIR-domain-containing-protein
MAYFTKQEAYDSARKAKLSTETYLNKLESIVESQKYQYRFDVFLSHSVKDAELVLGVIRILEDMGQKVYVDWVVDPQLPRDSVTKETAKTLRDRMKQSSKLLYLATDNASSSKWMPWELGYFDGLKSGNVAILPLVDSAYSSFQGQEYLGLYPALGKDDLRRFLG
>NZ_CP031255.1|WP_114922180.1|1717769_1718387_-|TIR-domain-containing-protein
MGRKIFISYKYSDSSVERLSLYQEATARDYVDFLQKKLEKDGIHINKGEKDNESLAQFKDETIQTKLSDKIFDSSVTIVLLSPNMKEWWNSESEQWIPWEIAYSIKNKKRALSSSKRNAILLVALPDRNGNYSYTDQPSFYFNIINNNRNNLKYSYPANYLTPNCSQSYMLKCNWDKFISNVNGWINAAVEIKENSDKYIINTKI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	948450-948479	5	0.833
NZ_CP031255_1	1.19\|432051\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432051-432080	30	NC_014642	Achromobacter xylosoxidans A8 plasmid pA82, complete sequence	221646-221675	5	0.833
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	100123-100152	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	2031941-2031970	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	180434-180463	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	99870-99899	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	169520-169549	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1920527-1920556	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	2133234-2133263	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1971365-1971394	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1920704-1920733	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1971388-1971417	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1971363-1971392	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1920147-1920176	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1920091-1920120	6	0.8
NZ_CP031255_1	1.6\|431193\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431193-431222	30	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	263081-263110	6	0.8
NZ_CP031255_1	1.7\|431259\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431259-431288	30	MN693996	Marine virus AFVG_250M857, complete genome	41036-41065	6	0.8
NZ_CP031255_1	1.7\|431259\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431259-431288	30	MN693733	Marine virus AFVG_250M308, complete genome	40750-40779	6	0.8
NZ_CP031255_1	1.10\|431457\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431457-431486	30	NZ_CP048421	Sphingomonas insulae strain KCTC 12872 plasmid unnamed3, complete sequence	165647-165676	6	0.8
NZ_CP031255_1	1.11\|431523\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431523-431552	30	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	191108-191137	6	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	MK279899	Arthrobacter phage Maja, complete genome	13339-13368	7	0.767
NZ_CP031255_1	1.2\|430929\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430929-430958	30	MN694749	Marine virus AFVG_250M1150, complete genome	9560-9589	7	0.767
NZ_CP031255_1	1.2\|430929\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430929-430958	30	MN694747	Marine virus AFVG_250M618, complete genome	9386-9415	7	0.767
NZ_CP031255_1	1.11\|431523\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431523-431552	30	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	531364-531393	7	0.767
NZ_CP031255_1	1.11\|431523\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431523-431552	30	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	642528-642557	7	0.767
NZ_CP031255_1	1.12\|431589\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431589-431618	30	NZ_CP026529	Sinorhizobium meliloti strain AK21 plasmid pSmeAK21b, complete sequence	63236-63265	7	0.767
NZ_CP031255_1	1.12\|431589\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431589-431618	30	KP881232	Sinorhizobium phage phiM9, complete genome	127136-127165	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448871	Streptococcus phage Javan196, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448976	Streptococcus phage Javan528, complete genome	3941-3970	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448961	Streptococcus phage Javan494, complete genome	3941-3970	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448697	Streptococcus phage Javan185, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448763	Streptococcus phage Javan451, complete genome	4835-4864	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448953	Streptococcus phage Javan474, complete genome	5923-5952	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448693	Streptococcus phage Javan177, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448945	Streptococcus phage Javan454, complete genome	6507-6536	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448766	Streptococcus phage Javan465, complete genome	4906-4935	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448696	Streptococcus phage Javan183, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448868	Streptococcus phage Javan188, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448866	Streptococcus phage Javan184, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448699	Streptococcus phage Javan189, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.14\|431721\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431721-431750	30	MK448867	Streptococcus phage Javan186, complete genome	3943-3972	7	0.767
NZ_CP031255_1	1.19\|432051\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432051-432080	30	NZ_LS974446	Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence	139082-139111	7	0.767
NZ_CP031255_1	1.20\|432117\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432117-432146	30	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	282803-282832	7	0.767
NZ_CP031255_1	1.20\|432117\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432117-432146	30	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	158414-158443	7	0.767
NZ_CP031255_1	1.20\|432117\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432117-432146	30	NZ_CP047086	Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence	261283-261312	7	0.767
NZ_CP031255_1	1.20\|432117\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432117-432146	30	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	24649-24678	7	0.767
NZ_CP031255_1	1.20\|432117\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432117-432146	30	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	98420-98449	7	0.767
NZ_CP031255_1	1.20\|432117\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432117-432146	30	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	81436-81465	7	0.767
NZ_CP031255_2	2.52\|1708185\|35\|NZ_CP031255\|CRISPRCasFinder	1708185-1708219	35	MK448495	Streptococcus satellite phage Javan434, complete genome	3526-3560	7	0.8
NZ_CP031255_2	2.52\|1708185\|35\|NZ_CP031255\|CRISPRCasFinder	1708185-1708219	35	KC330683	Bacillus phage Finn, complete genome	3800-3834	7	0.8
NZ_CP031255_2	2.78\|1708186\|35\|NZ_CP031255\|PILER-CR	1708186-1708220	35	MK448495	Streptococcus satellite phage Javan434, complete genome	3526-3560	7	0.8
NZ_CP031255_2	2.78\|1708186\|35\|NZ_CP031255\|PILER-CR	1708186-1708220	35	KC330683	Bacillus phage Finn, complete genome	3800-3834	7	0.8
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	NZ_CP016850	Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence	97550-97579	8	0.733
NZ_CP031255_1	1.3\|430995\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430995-431024	30	GU979517	Acinetobacter phage phiAB2 hypothetical protein (pd9) gene, partial cds	1575-1604	8	0.733
NZ_CP031255_1	1.3\|430995\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430995-431024	30	NC_041966	Acinetobacter phage WCHABP1, complete genome	2382-2411	8	0.733
NZ_CP031255_1	1.3\|430995\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430995-431024	30	MH853788	Acinetobacter phage vB_KpnM_IME512, complete genome	28962-28991	8	0.733
NZ_CP031255_1	1.3\|430995\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430995-431024	30	MN166083	Acinetobacter phage Abp9, complete genome	31309-31338	8	0.733
NZ_CP031255_1	1.3\|430995\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430995-431024	30	NC_048142	Acinetobacter phage AbKT21phiIII, complete genome	40594-40623	8	0.733
NZ_CP031255_1	1.4\|431061\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431061-431090	30	GU979517	Acinetobacter phage phiAB2 hypothetical protein (pd9) gene, partial cds	1575-1604	8	0.733
NZ_CP031255_1	1.4\|431061\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431061-431090	30	NC_041966	Acinetobacter phage WCHABP1, complete genome	2382-2411	8	0.733
NZ_CP031255_1	1.4\|431061\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431061-431090	30	MH853788	Acinetobacter phage vB_KpnM_IME512, complete genome	28962-28991	8	0.733
NZ_CP031255_1	1.4\|431061\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431061-431090	30	MN166083	Acinetobacter phage Abp9, complete genome	31309-31338	8	0.733
NZ_CP031255_1	1.4\|431061\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431061-431090	30	NC_048142	Acinetobacter phage AbKT21phiIII, complete genome	40594-40623	8	0.733
NZ_CP031255_1	1.8\|431325\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431325-431354	30	NC_001949	Lactococcus lactis DPC3147 plasmid pMRC01, complete sequence	15233-15262	8	0.733
NZ_CP031255_1	1.10\|431457\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431457-431486	30	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	64001-64030	8	0.733
NZ_CP031255_1	1.11\|431523\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431523-431552	30	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	334153-334182	8	0.733
NZ_CP031255_1	1.13\|431655\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431655-431684	30	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	43130-43159	8	0.733
NZ_CP031255_1	1.18\|431985\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	431985-432014	30	NC_012983	Hirschia baltica ATCC 49814 plasmid pHbal01, complete sequence	68910-68939	8	0.733
NZ_CP031255_1	1.21\|432183\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432183-432212	30	AP013647	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C72-MedDCM-OCT-S41-C96, * SEQUENCING IN PROGRESS *	15405-15434	8	0.733
NZ_CP031255_1	1.22\|432249\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	432249-432278	30	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	48252-48281	8	0.733
NZ_CP031255_2	2.29\|1706667\|33\|NZ_CP031255\|CRISPRCasFinder	1706667-1706699	33	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	33681-33713	8	0.758
NZ_CP031255_2	2.34\|1706998\|33\|NZ_CP031255\|CRISPRCasFinder	1706998-1707030	33	NZ_CP030786	Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence	7418-7450	8	0.758
NZ_CP031255_2	2.40\|1707391\|34\|NZ_CP031255\|CRISPRCasFinder	1707391-1707424	34	MF360958	Salicola phage SCTP-2, complete genome	14558-14591	8	0.765
NZ_CP031255_2	2.52\|1708185\|35\|NZ_CP031255\|CRISPRCasFinder	1708185-1708219	35	KC330682	Bacillus phage Taylor, complete genome	3125-3159	8	0.771
NZ_CP031255_2	2.52\|1708185\|35\|NZ_CP031255\|CRISPRCasFinder	1708185-1708219	35	KC330680	Bacillus phage Eoghan, complete genome	3126-3160	8	0.771
NZ_CP031255_2	2.55\|1706668\|33\|NZ_CP031255\|PILER-CR	1706668-1706700	33	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	33681-33713	8	0.758
NZ_CP031255_2	2.60\|1706999\|33\|NZ_CP031255\|PILER-CR	1706999-1707031	33	NZ_CP030786	Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence	7418-7450	8	0.758
NZ_CP031255_2	2.66\|1707392\|34\|NZ_CP031255\|PILER-CR	1707392-1707425	34	MF360958	Salicola phage SCTP-2, complete genome	14558-14591	8	0.765
NZ_CP031255_2	2.78\|1708186\|35\|NZ_CP031255\|PILER-CR	1708186-1708220	35	KC330682	Bacillus phage Taylor, complete genome	3125-3159	8	0.771
NZ_CP031255_2	2.78\|1708186\|35\|NZ_CP031255\|PILER-CR	1708186-1708220	35	KC330680	Bacillus phage Eoghan, complete genome	3126-3160	8	0.771
NZ_CP031255_1	1.1\|430863\|30\|NZ_CP031255\|PILER-CR,CRISPRCasFinder,CRT	430863-430892	30	MF140416	Mycobacterium phage LastHope, complete genome	31947-31976	9	0.7
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013669	Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-4, complete sequence	22927-22960	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013789	Piscirickettsia salmonis strain PM58386B plasmid p3PS7, complete sequence	12257-12290	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013764	Piscirickettsia salmonis strain PM21567A plasmid p2PS2, complete sequence	39916-39949	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013817	Piscirickettsia salmonis strain AY3800B plasmid p1PS10, complete sequence	8561-8594	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013793	Piscirickettsia salmonis strain AY6297B plasmid p2PS8, complete sequence	8556-8589	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013809	Piscirickettsia salmonis strain PM31429B plasmid p3PS12, complete sequence	12254-12287	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013784	Piscirickettsia salmonis strain PM49811B plasmid p3PS6, complete sequence	12246-12279	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP039192	Piscirickettsia salmonis strain Psal-160 plasmid unnamed2, complete sequence	80589-80622	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP039089	Piscirickettsia salmonis strain Psal-111 plasmid unnamed2, complete sequence	36608-36641	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013798	Piscirickettsia salmonis strain AY6532B plasmid p2PS9, complete sequence	35270-35303	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013978	Piscirickettsia salmonis strain CGR02 plasmid pPSCRG02-4, complete sequence	11506-11539	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP012509	Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-1, complete sequence	50545-50578	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013822	Piscirickettsia salmonis strain PM25344B plasmid p1PS14, complete sequence	50637-50670	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013758	Piscirickettsia salmonis strain AY6492A plasmid p1PS1, complete sequence	62356-62389	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP039183	Piscirickettsia salmonis strain Psal-158 plasmid unnamed2, complete sequence	70919-70952	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP039052	Piscirickettsia salmonis strain Psal-081 plasmid unnamed2, complete sequence	35502-35535	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP013945	Piscirickettsia salmonis strain PSCGR01 plasmid pPSCRG01-4, complete sequence	44535-44568	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP039057	Piscirickettsia salmonis strain Psal-098 plasmid unnamed2, complete sequence	35502-35535	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP038933	Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence	62649-62682	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP012416	Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3, complete sequence	32636-32669	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP039067	Piscirickettsia salmonis strain Psal-107 plasmid unnamed2, complete sequence	70918-70951	9	0.735
NZ_CP031255_2	2.51\|1708119\|34\|NZ_CP031255\|CRISPRCasFinder	1708119-1708152	34	NZ_CP038901	Piscirickettsia salmonis strain Psal-006b plasmid unnamed3, complete sequence	35502-35535	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013669	Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-4, complete sequence	22927-22960	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013789	Piscirickettsia salmonis strain PM58386B plasmid p3PS7, complete sequence	12257-12290	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013764	Piscirickettsia salmonis strain PM21567A plasmid p2PS2, complete sequence	39916-39949	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013817	Piscirickettsia salmonis strain AY3800B plasmid p1PS10, complete sequence	8561-8594	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013793	Piscirickettsia salmonis strain AY6297B plasmid p2PS8, complete sequence	8556-8589	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013809	Piscirickettsia salmonis strain PM31429B plasmid p3PS12, complete sequence	12254-12287	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013784	Piscirickettsia salmonis strain PM49811B plasmid p3PS6, complete sequence	12246-12279	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP039192	Piscirickettsia salmonis strain Psal-160 plasmid unnamed2, complete sequence	80589-80622	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP039089	Piscirickettsia salmonis strain Psal-111 plasmid unnamed2, complete sequence	36608-36641	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013798	Piscirickettsia salmonis strain AY6532B plasmid p2PS9, complete sequence	35270-35303	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013978	Piscirickettsia salmonis strain CGR02 plasmid pPSCRG02-4, complete sequence	11506-11539	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP012509	Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-1, complete sequence	50545-50578	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013822	Piscirickettsia salmonis strain PM25344B plasmid p1PS14, complete sequence	50637-50670	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013758	Piscirickettsia salmonis strain AY6492A plasmid p1PS1, complete sequence	62356-62389	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP039183	Piscirickettsia salmonis strain Psal-158 plasmid unnamed2, complete sequence	70919-70952	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP039052	Piscirickettsia salmonis strain Psal-081 plasmid unnamed2, complete sequence	35502-35535	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP013945	Piscirickettsia salmonis strain PSCGR01 plasmid pPSCRG01-4, complete sequence	44535-44568	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP039057	Piscirickettsia salmonis strain Psal-098 plasmid unnamed2, complete sequence	35502-35535	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP038933	Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence	62649-62682	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP012416	Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3, complete sequence	32636-32669	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP039067	Piscirickettsia salmonis strain Psal-107 plasmid unnamed2, complete sequence	70918-70951	9	0.735
NZ_CP031255_2	2.77\|1708120\|34\|NZ_CP031255\|PILER-CR	1708120-1708153	34	NZ_CP038901	Piscirickettsia salmonis strain Psal-006b plasmid unnamed3, complete sequence	35502-35535	9	0.735
NZ_CP031255_2	2.33\|1706933\|33\|NZ_CP031255\|CRISPRCasFinder	1706933-1706965	33	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1020584-1020616	10	0.697
NZ_CP031255_2	2.39\|1707325\|34\|NZ_CP031255\|CRISPRCasFinder	1707325-1707358	34	MN038175	Panteoa phage Phynn, complete genome	65871-65904	10	0.706
NZ_CP031255_2	2.59\|1706934\|33\|NZ_CP031255\|PILER-CR	1706934-1706966	33	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1020584-1020616	10	0.697
NZ_CP031255_2	2.65\|1707326\|34\|NZ_CP031255\|PILER-CR	1707326-1707359	34	MN038175	Panteoa phage Phynn, complete genome	65871-65904	10	0.706
NZ_CP031255_2	2.44\|1707657\|34\|NZ_CP031255\|CRISPRCasFinder	1707657-1707690	34	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	235980-236013	11	0.676
NZ_CP031255_2	2.70\|1707658\|34\|NZ_CP031255\|PILER-CR	1707658-1707691	34	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	235980-236013	11	0.676

1. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 5, identity: 0.833

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
acgtgcaggacggcaaggcgtggacatcgg	Protospacer
 **************** ******** *

2. spacer 1.19|432051|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_014642 (Achromobacter xylosoxidans A8 plasmid pA82, complete sequence) position: , mismatch: 5, identity: 0.833

caatgcgggatgccatgcaccctttgttga--	CRISPR spacer
caacgcgggatgccctgcaccc--tgatgaag	Protospacer
***.********** *******  ** ***

3. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

4. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

5. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

6. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

7. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

8. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

9. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

10. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

11. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

12. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

13. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

14. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

15. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
atgtgcaggacggcaaggcgtggacatcgg	Protospacer
 .*************** ******** *

16. spacer 1.6|431193|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

gcccaaatcatagatttctttgatcgcaag	CRISPR spacer
acccaagtcatagatttctttcatcggcaa	Protospacer
.*****.************** ****  *.

17. spacer 1.7|431259|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MN693996 (Marine virus AFVG_250M857, complete genome) position: , mismatch: 6, identity: 0.8

cggttcgctcgttgtgatagacgaagcaca	CRISPR spacer
ccctacgctcgtcgtgatggacgaagcaga	Protospacer
*  * *******.*****.********* *

18. spacer 1.7|431259|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MN693733 (Marine virus AFVG_250M308, complete genome) position: , mismatch: 6, identity: 0.8

cggttcgctcgttgtgatagacgaagcaca	CRISPR spacer
ccctacgctcgtcgtgatggacgaagcaga	Protospacer
*  * *******.*****.********* *

19. spacer 1.10|431457|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048421 (Sphingomonas insulae strain KCTC 12872 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

gcaagtcggaacatgcggaacggcttgcct	CRISPR spacer
gcgaaatcgaacatgcggaacggcttgccc	Protospacer
**.*. . *********************.

20. spacer 1.11|431523|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 6, identity: 0.8

gccgcgccgcgcatatagtccacatgcccc	CRISPR spacer
gccgcgccgcgcatatagcccacgcgcttg	Protospacer
******************.****..**..

21. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK279899 (Arthrobacter phage Maja, complete genome) position: , mismatch: 7, identity: 0.767

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
gagtgccggacggcaagccgtggaacccca	Protospacer
  **** *****************   **

22. spacer 1.2|430929|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MN694749 (Marine virus AFVG_250M1150, complete genome) position: , mismatch: 7, identity: 0.767

attgcaaaagcatttaggctggaaacgcaa	CRISPR spacer
aatgcaaaagcatttatgctgaaaaaaaca	Protospacer
* ************** ****.*** .  *

23. spacer 1.2|430929|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MN694747 (Marine virus AFVG_250M618, complete genome) position: , mismatch: 7, identity: 0.767

attgcaaaagcatttaggctggaaacgcaa	CRISPR spacer
aatgcaaaagcatttatgctgaaaaaaaca	Protospacer
* ************** ****.*** .  *

24. spacer 1.11|431523|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

gccgcgccgcgcatatagtccacatgcccc	CRISPR spacer
ggggcgccgcgcagatcgtccacatgggcg	Protospacer
*  ********** ** *********  *

25. spacer 1.11|431523|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 7, identity: 0.767

gccgcgccgcgcatatagtccacatgcccc	CRISPR spacer
gccgcgccgcgcatgtagcccacgcgcttt	Protospacer
**************.***.****..**...

26. spacer 1.12|431589|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026529 (Sinorhizobium meliloti strain AK21 plasmid pSmeAK21b, complete sequence) position: , mismatch: 7, identity: 0.767

tggctcgctggttgtgatagacgaagcaca-	CRISPR spacer
ctgcccgctggttctgatagacgaa-cgcgg	Protospacer
. **.******** *********** *.*.

27. spacer 1.12|431589|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to KP881232 (Sinorhizobium phage phiM9, complete genome) position: , mismatch: 7, identity: 0.767

tggctcgctggttgtgatagacgaagcaca	CRISPR spacer
gatctcgctggttgagatagtcgaagatca	Protospacer
 . *********** ***** *****  **

28. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

29. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggggactatgaacacctttgccaaatct	Protospacer
  * .* ** ****** *************

30. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

31. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

32. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

33. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

34. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

35. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

36. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

37. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

38. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

39. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

40. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

41. spacer 1.14|431721|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 7, identity: 0.767

aagtagcctctgaacaactttgccaaatct	CRISPR spacer
ctggtgactatgaacacctttgccaaatct	Protospacer
  *  * ** ****** *************

42. spacer 1.19|432051|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

caatgcgggatgccatgcaccctttgttga--	CRISPR spacer
tcatgcgggaggccatgcaccc--tgccgacc	Protospacer
. ******** ***********  **..**

43. spacer 1.20|432117|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 7, identity: 0.767

gtcacaggtgttgtaaaacaaacatcatct	CRISPR spacer
gaaacaggtgttgtaaaagaaacagggttt	Protospacer
*  *************** *****  .*.*

44. spacer 1.20|432117|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 7, identity: 0.767

gtcacaggtgttgtaaaacaaacatcatct	CRISPR spacer
gaaacaggtgttgtaaaagaaacagggttt	Protospacer
*  *************** *****  .*.*

45. spacer 1.20|432117|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047086 (Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence) position: , mismatch: 7, identity: 0.767

gtcacaggtgttgtaaaacaaacatcatct	CRISPR spacer
gaaacaggtgttgtaaaagaaacagggttt	Protospacer
*  *************** *****  .*.*

46. spacer 1.20|432117|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 7, identity: 0.767

gtcacaggtgttgtaaaacaaacatcatct	CRISPR spacer
gaaacaggtgttgtaaaagaaacagggttt	Protospacer
*  *************** *****  .*.*

47. spacer 1.20|432117|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gtcacaggtgttgtaaaacaaacatcatct	CRISPR spacer
gaaacaggtgttgtaaaagaaacagggttt	Protospacer
*  *************** *****  .*.*

48. spacer 1.20|432117|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gtcacaggtgttgtaaaacaaacatcatct	CRISPR spacer
gaaacaggtgttgtaaaagaaacagggttt	Protospacer
*  *************** *****  .*.*

49. spacer 2.52|1708185|35|NZ_CP031255|CRISPRCasFinder matches to MK448495 (Streptococcus satellite phage Javan434, complete genome) position: , mismatch: 7, identity: 0.8

tatgtcaacagtttttttgaaaaataatttatgta	CRISPR spacer
tatgtcaatagttttttagaaaaatattatttttt	Protospacer
********.******** ******** * * * *

50. spacer 2.52|1708185|35|NZ_CP031255|CRISPRCasFinder matches to KC330683 (Bacillus phage Finn, complete genome) position: , mismatch: 7, identity: 0.8

tatgtcaacagtttttttgaaaaataatttatgta--	CRISPR spacer
tatgtcaacagtttttataaaaaatg--ttaaggagt	Protospacer
**************** *.******.  *** * *

51. spacer 2.78|1708186|35|NZ_CP031255|PILER-CR matches to MK448495 (Streptococcus satellite phage Javan434, complete genome) position: , mismatch: 7, identity: 0.8

tatgtcaacagtttttttgaaaaataatttatgta	CRISPR spacer
tatgtcaatagttttttagaaaaatattatttttt	Protospacer
********.******** ******** * * * *

52. spacer 2.78|1708186|35|NZ_CP031255|PILER-CR matches to KC330683 (Bacillus phage Finn, complete genome) position: , mismatch: 7, identity: 0.8

tatgtcaacagtttttttgaaaaataatttatgta--	CRISPR spacer
tatgtcaacagtttttataaaaaatg--ttaaggagt	Protospacer
**************** *.******.  *** * *

53. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016850 (Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence) position: , mismatch: 8, identity: 0.733

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
tagacgaaaacggcaagcagtggacagccc	Protospacer
. *   *..********* ***********

54. spacer 1.3|430995|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to GU979517 (Acinetobacter phage phiAB2 hypothetical protein (pd9) gene, partial cds) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
acctgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

55. spacer 1.3|430995|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_041966 (Acinetobacter phage WCHABP1, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
gcccgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

56. spacer 1.3|430995|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MH853788 (Acinetobacter phage vB_KpnM_IME512, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
gcctgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

57. spacer 1.3|430995|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MN166083 (Acinetobacter phage Abp9, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
gcccgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

58. spacer 1.3|430995|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_048142 (Acinetobacter phage AbKT21phiIII, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
acctgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

59. spacer 1.4|431061|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to GU979517 (Acinetobacter phage phiAB2 hypothetical protein (pd9) gene, partial cds) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
acctgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

60. spacer 1.4|431061|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_041966 (Acinetobacter phage WCHABP1, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
gcccgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

61. spacer 1.4|431061|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MH853788 (Acinetobacter phage vB_KpnM_IME512, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
gcctgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

62. spacer 1.4|431061|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MN166083 (Acinetobacter phage Abp9, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
gcccgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

63. spacer 1.4|431061|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_048142 (Acinetobacter phage AbKT21phiIII, complete genome) position: , mismatch: 8, identity: 0.733

tgtaattggttttgggtgtaatgttttaac	CRISPR spacer
acctgttggttttggttgtgatgttttaat	Protospacer
  . .********** ***.*********.

64. spacer 1.8|431325|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_001949 (Lactococcus lactis DPC3147 plasmid pMRC01, complete sequence) position: , mismatch: 8, identity: 0.733

gaagttatcaatggttatgagaaaaagcct	CRISPR spacer
aacattatcaatgatgatgagaaaaagata	Protospacer
.* .*********.* *********** .

65. spacer 1.10|431457|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 8, identity: 0.733

gcaagtcggaacatgcggaacggcttgcct	CRISPR spacer
atgagctcgaacatgcggaagggcttgccc	Protospacer
...**.. ************ ********.

66. spacer 1.11|431523|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.733

gccgcgccgcgcatatagtccacatgcccc	CRISPR spacer
tccgcgccgcggatatagtccatgaactca	Protospacer
 ********** **********.. .*.*

67. spacer 1.13|431655|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 8, identity: 0.733

ctatacttcaaaatcaaggaagaccgccgc	CRISPR spacer
ggctggttcaagatcaaggaagaccgccca	Protospacer
   *. *****.****************

68. spacer 1.18|431985|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NC_012983 (Hirschia baltica ATCC 49814 plasmid pHbal01, complete sequence) position: , mismatch: 8, identity: 0.733

atcaaagtaatggccgttggaaataaagca	CRISPR spacer
ctttttctattgtccgttggaaataaagca	Protospacer
 *.    ** ** *****************

69. spacer 1.21|432183|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to AP013647 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C72-MedDCM-OCT-S41-C96, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

aaacggaaatgaacaaggtaataaattgga	CRISPR spacer
tcatatatttgaacaaggtaataaattaga	Protospacer
  *.. *  ******************.**

70. spacer 1.22|432249|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gtcgaattgacttcaattccgtgggagaat	CRISPR spacer
gtcgaagtgacatcaattccgtgcagcgac	Protospacer
****** **** *********** .. .*.

71. spacer 2.29|1706667|33|NZ_CP031255|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

ccgctggc-----cgacgtgctgatacacagcggcctt	CRISPR spacer
-----ggcgcccgcgacgtgctgatccgcagcggcctg	Protospacer
     ***     ************ *.*********

72. spacer 2.34|1706998|33|NZ_CP031255|CRISPRCasFinder matches to NZ_CP030786 (Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

cgaaaaattgcattaactaaaggatattgatat	CRISPR spacer
tataaaattgcattaacaaaaggaaattggaaa	Protospacer
.. ************** ****** ****. *

73. spacer 2.40|1707391|34|NZ_CP031255|CRISPRCasFinder matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 8, identity: 0.765

atgtaaccatcaacatctcccaactccgattgag	CRISPR spacer
aatgaaccatcaacatcacccaactctgatagtt	Protospacer
*   ************* ********.*** *

74. spacer 2.52|1708185|35|NZ_CP031255|CRISPRCasFinder matches to KC330682 (Bacillus phage Taylor, complete genome) position: , mismatch: 8, identity: 0.771

tatgtcaacagtttttttgaaaaataatttatgta	CRISPR spacer
tatgtcaacagtttttataaaaaatgtttaaggag	Protospacer
**************** *.******. ** * * .

75. spacer 2.52|1708185|35|NZ_CP031255|CRISPRCasFinder matches to KC330680 (Bacillus phage Eoghan, complete genome) position: , mismatch: 8, identity: 0.771

tatgtcaacagtttttttgaaaaataatttatgta	CRISPR spacer
tatgtcaacagtttttataaaaaatgtttaaggag	Protospacer
**************** *.******. ** * * .

76. spacer 2.55|1706668|33|NZ_CP031255|PILER-CR matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

ccgctggc-----cgacgtgctgatacacagcggcctt	CRISPR spacer
-----ggcgcccgcgacgtgctgatccgcagcggcctg	Protospacer
     ***     ************ *.*********

77. spacer 2.60|1706999|33|NZ_CP031255|PILER-CR matches to NZ_CP030786 (Escherichia albertii strain 2012EL-1823B plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

cgaaaaattgcattaactaaaggatattgatat	CRISPR spacer
tataaaattgcattaacaaaaggaaattggaaa	Protospacer
.. ************** ****** ****. *

78. spacer 2.66|1707392|34|NZ_CP031255|PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 8, identity: 0.765

atgtaaccatcaacatctcccaactccgattgag	CRISPR spacer
aatgaaccatcaacatcacccaactctgatagtt	Protospacer
*   ************* ********.*** *

79. spacer 2.78|1708186|35|NZ_CP031255|PILER-CR matches to KC330682 (Bacillus phage Taylor, complete genome) position: , mismatch: 8, identity: 0.771

tatgtcaacagtttttttgaaaaataatttatgta	CRISPR spacer
tatgtcaacagtttttataaaaaatgtttaaggag	Protospacer
**************** *.******. ** * * .

80. spacer 2.78|1708186|35|NZ_CP031255|PILER-CR matches to KC330680 (Bacillus phage Eoghan, complete genome) position: , mismatch: 8, identity: 0.771

tatgtcaacagtttttttgaaaaataatttatgta	CRISPR spacer
tatgtcaacagtttttataaaaaatgtttaaggag	Protospacer
**************** *.******. ** * * .

81. spacer 1.1|430863|30|NZ_CP031255|PILER-CR,CRISPRCasFinder,CRT matches to MF140416 (Mycobacterium phage LastHope, complete genome) position: , mismatch: 9, identity: 0.7

ccgtgcaggacggcaagccgtggacagccc	CRISPR spacer
ggccgcagtacggcaagccgtggacgttca	Protospacer
   .**** ****************. .*

82. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013669 (Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-4, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

83. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013789 (Piscirickettsia salmonis strain PM58386B plasmid p3PS7, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

84. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013764 (Piscirickettsia salmonis strain PM21567A plasmid p2PS2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

85. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013817 (Piscirickettsia salmonis strain AY3800B plasmid p1PS10, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

86. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013793 (Piscirickettsia salmonis strain AY6297B plasmid p2PS8, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

87. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013809 (Piscirickettsia salmonis strain PM31429B plasmid p3PS12, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

88. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013784 (Piscirickettsia salmonis strain PM49811B plasmid p3PS6, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

89. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP039192 (Piscirickettsia salmonis strain Psal-160 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

90. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP039089 (Piscirickettsia salmonis strain Psal-111 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

91. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013798 (Piscirickettsia salmonis strain AY6532B plasmid p2PS9, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

92. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013978 (Piscirickettsia salmonis strain CGR02 plasmid pPSCRG02-4, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

93. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP012509 (Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-1, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

94. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013822 (Piscirickettsia salmonis strain PM25344B plasmid p1PS14, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

95. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013758 (Piscirickettsia salmonis strain AY6492A plasmid p1PS1, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

96. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP039183 (Piscirickettsia salmonis strain Psal-158 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

97. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP039052 (Piscirickettsia salmonis strain Psal-081 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

98. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP013945 (Piscirickettsia salmonis strain PSCGR01 plasmid pPSCRG01-4, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

99. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP039057 (Piscirickettsia salmonis strain Psal-098 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

100. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP038933 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

101. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP012416 (Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

102. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP039067 (Piscirickettsia salmonis strain Psal-107 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

103. spacer 2.51|1708119|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP038901 (Piscirickettsia salmonis strain Psal-006b plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

104. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013669 (Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-4, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

105. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013789 (Piscirickettsia salmonis strain PM58386B plasmid p3PS7, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

106. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013764 (Piscirickettsia salmonis strain PM21567A plasmid p2PS2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

107. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013817 (Piscirickettsia salmonis strain AY3800B plasmid p1PS10, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

108. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013793 (Piscirickettsia salmonis strain AY6297B plasmid p2PS8, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

109. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013809 (Piscirickettsia salmonis strain PM31429B plasmid p3PS12, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

110. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013784 (Piscirickettsia salmonis strain PM49811B plasmid p3PS6, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

111. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP039192 (Piscirickettsia salmonis strain Psal-160 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

112. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP039089 (Piscirickettsia salmonis strain Psal-111 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

113. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013798 (Piscirickettsia salmonis strain AY6532B plasmid p2PS9, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

114. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013978 (Piscirickettsia salmonis strain CGR02 plasmid pPSCRG02-4, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

115. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP012509 (Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-1, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

116. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013822 (Piscirickettsia salmonis strain PM25344B plasmid p1PS14, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

117. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013758 (Piscirickettsia salmonis strain AY6492A plasmid p1PS1, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

118. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP039183 (Piscirickettsia salmonis strain Psal-158 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

119. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP039052 (Piscirickettsia salmonis strain Psal-081 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

120. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP013945 (Piscirickettsia salmonis strain PSCGR01 plasmid pPSCRG01-4, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

121. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP039057 (Piscirickettsia salmonis strain Psal-098 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

122. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP038933 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

123. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP012416 (Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

124. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP039067 (Piscirickettsia salmonis strain Psal-107 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

125. spacer 2.77|1708120|34|NZ_CP031255|PILER-CR matches to NZ_CP038901 (Piscirickettsia salmonis strain Psal-006b plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

taagcagtataattttaaaaattgaggtgattta	CRISPR spacer
atagcagtatatttttaataattgagattactag	Protospacer
  ********* ****** *******.* *.* .

126. spacer 2.33|1706933|33|NZ_CP031255|CRISPRCasFinder matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 10, identity: 0.697

ctgattgccggcaggctgcatcaggcggtggat	CRISPR spacer
acgcagtccggctggctgcatccggcggtggcg	Protospacer
 .*    ***** ********* ********

127. spacer 2.39|1707325|34|NZ_CP031255|CRISPRCasFinder matches to MN038175 (Panteoa phage Phynn, complete genome) position: , mismatch: 10, identity: 0.706

tgccgataaaaaacatcttagcgtattcaacatt	CRISPR spacer
cgggtataacaaacctcttagcgtattcatgaag	Protospacer
.*   **** **** **************  *

128. spacer 2.59|1706934|33|NZ_CP031255|PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 10, identity: 0.697

ctgattgccggcaggctgcatcaggcggtggat	CRISPR spacer
acgcagtccggctggctgcatccggcggtggcg	Protospacer
 .*    ***** ********* ********

129. spacer 2.65|1707326|34|NZ_CP031255|PILER-CR matches to MN038175 (Panteoa phage Phynn, complete genome) position: , mismatch: 10, identity: 0.706

tgccgataaaaaacatcttagcgtattcaacatt	CRISPR spacer
cgggtataacaaacctcttagcgtattcatgaag	Protospacer
.*   **** **** **************  *

130. spacer 2.44|1707657|34|NZ_CP031255|CRISPRCasFinder matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 11, identity: 0.676

gattccgtttccgccgctgtatcaggaatcggct	CRISPR spacer
atcgaccttgccgccgctgtaccaggaatcgctg	Protospacer
. .  * ** ***********.********* .

131. spacer 2.70|1707658|34|NZ_CP031255|PILER-CR matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 11, identity: 0.676

gattccgtttccgccgctgtatcaggaatcggct	CRISPR spacer
atcgaccttgccgccgctgtaccaggaatcgctg	Protospacer
. .  * ** ***********.********* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1188448 : 1220870

Acinetobacter_phage(28.0%)

plate,capsid,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_107971347.1\|1188448_1189306_-	DNA replication protein DnaD	F5A3D6	Riemerella_phage	1.6e-41	37.5
WP_114921904.1\|1189371_1190073_-	helix-turn-helix transcriptional regulator	M9NZE3	Enterobacteria_phage	1.6e-34	42.6
WP_107971349.1\|1190186_1190384_+	hypothetical protein	NA	NA	NA	NA
WP_114921905.1\|1190427_1190634_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_114922662.1\|1190906_1191821_+	helix-turn-helix domain-containing protein	A0A0M3LS90	Mannheimia_phage	7.4e-08	44.6
WP_162817642.1\|1191822_1192623_+	ATP-binding protein	A0A067ZJ24	Vibrio_phage	5.2e-34	37.1
WP_114921907.1\|1192840_1193404_+	hypothetical protein	H2BDI7	Pseudomonas_virus	2.4e-33	46.8
WP_114922663.1\|1193403_1193793_+	hypothetical protein	W6MYB1	Pseudomonas_phage	1.9e-21	45.3
WP_114921908.1\|1193793_1194138_+	hypothetical protein	NA	NA	NA	NA
WP_114921909.1\|1194197_1194722_+	hypothetical protein	NA	NA	NA	NA
WP_114921910.1\|1194996_1195458_+	helix-turn-helix domain-containing protein	C7U0V7	Enterobacteria_phage	1.3e-48	67.7
WP_114921911.1\|1195447_1196800_+\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	5.0e-146	57.1
WP_114921912.1\|1198277_1199066_+\|capsid	minor capsid protein	A0A0D4DCM6	Acinetobacter_phage	3.1e-55	43.4
WP_114921913.1\|1199062_1200964_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	1.2e-60	39.1
WP_114921914.1\|1200967_1201447_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.4e-26	51.6
WP_114921915.1\|1201454_1202453_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	2.1e-96	52.4
WP_114921916.1\|1202522_1202855_+	hypothetical protein	NA	NA	NA	NA
WP_114921917.1\|1202857_1203256_+	DUF4054 domain-containing protein	Q2NPC6	Xanthomonas_phage	1.2e-15	45.6
WP_114921918.1\|1203763_1204144_+	hypothetical protein	H9C0W3	Aeromonas_phage	1.7e-19	43.1
WP_114921919.1\|1204128_1204608_+	hypothetical protein	NA	NA	NA	NA
WP_114921920.1\|1204619_1206095_+	DUF3383 domain-containing protein	K4PB47	Acinetobacter_phage	8.9e-96	42.3
WP_114921921.1\|1206147_1206588_+	hypothetical protein	NA	NA	NA	NA
WP_114921922.1\|1206589_1207024_+	hypothetical protein	A0A068CGG2	Acinetobacter_phage	5.4e-17	41.0
WP_114921924.1\|1207191_1209546_+	transglycosylase SLT domain-containing protein	A0A1X9SFE0	Acinetobacter_phage	5.8e-89	34.8
WP_114921925.1\|1210269_1211289_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_114921926.1\|1211614_1212499_+	KilA-N domain-containing protein	A0A0R6PDL1	Moraxella_phage	3.4e-34	65.5
WP_162817643.1\|1212506_1212758_+	hypothetical protein	NA	NA	NA	NA
WP_114921927.1\|1212846_1213494_+	hypothetical protein	E2GM21	Acinetobacter_phage	2.0e-36	48.3
WP_114921928.1\|1213505_1213802_+	hypothetical protein	NA	NA	NA	NA
WP_114921929.1\|1213791_1214676_+	hypothetical protein	A0A220NQG9	Acinetobacter_phage	3.5e-63	43.0
WP_114921930.1\|1214656_1215361_+\|plate	phage baseplate protein	A0A2R3UAK1	Myoviridae_environmental_samples	2.1e-39	51.8
WP_114921931.1\|1215357_1215708_+	hypothetical protein	B7X9X8	uncultured_phage	2.7e-19	45.8
WP_114921932.1\|1215704_1216892_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	4.5e-50	33.5
WP_114921933.1\|1216884_1217517_+	DUF2612 domain-containing protein	Q2NPA3	Xanthomonas_phage	1.6e-30	36.1
WP_114921934.1\|1219224_1219494_+	hypothetical protein	NA	NA	NA	NA
WP_114921935.1\|1219554_1220040_+	hypothetical protein	NA	NA	NA	NA
WP_114921936.1\|1220036_1220348_+	hypothetical protein	NA	NA	NA	NA
WP_114922664.1\|1220399_1220870_+	lysozyme	D6QWN8	uncultured_phage	1.2e-25	42.1

DBSCAN-SWA_2

1822191 : 1925102

Burkholderia_virus(22.92%)

plate,integrase,capsid,transposase,tail

attL 1817232:1817252|attR 1857188:1857208

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1817232:1817252	attL	NA	NA	NA	NA
WP_114922238.1\|1822191_1822635_-	phage virion morphogenesis protein	A0A076FSU1	Pseudomonas_phage	1.9e-22	45.8
WP_114922239.1\|1822637_1823540_-\|capsid	minor capsid protein	A0A0A7DJT5	Pseudomonas_phage	1.6e-63	46.8
WP_114922240.1\|1823536_1825006_-	DUF935 family protein	A4JWJ5	Burkholderia_virus	4.5e-108	45.8
WP_114922241.1\|1825027_1826521_-	hypothetical protein	Q6QIC1	Burkholderia_phage	1.2e-201	68.8
WP_114922242.1\|1826517_1827063_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	7.7e-37	45.8
WP_013448348.1\|1827064_1827382_-	hypothetical protein	A0A2H4JGU5	uncultured_Caudovirales_phage	1.9e-27	63.9
WP_107863470.1\|1827378_1827699_-	hypothetical protein	A4JWP6	Burkholderia_virus	7.7e-13	43.9
WP_074897807.1\|1827698_1827908_-	TraR/DksA family transcriptional regulator	A0A0U4IIN4	Pseudomonas_phage	6.6e-05	42.6
WP_070453230.1\|1827900_1828104_-	hypothetical protein	NA	NA	NA	NA
WP_074897809.1\|1828099_1828486_-	hypothetical protein	NA	NA	NA	NA
WP_114922243.1\|1828469_1828730_-	hypothetical protein	NA	NA	NA	NA
WP_114921674.1\|1828835_1829843_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_114922244.1\|1830142_1830646_-	glycoside hydrolase family 108 protein	A0A0M3LSH2	Mannheimia_phage	8.6e-51	58.9
WP_107853832.1\|1830723_1831563_-	hypothetical protein	NA	NA	NA	NA
WP_162817690.1\|1831727_1832768_-	nucleoid-associated protein	NA	NA	NA	NA
WP_107853674.1\|1832823_1833726_-	hypothetical protein	A0A2I7S9A5	Vibrio_phage	4.5e-34	40.9
WP_107853673.1\|1833830_1834007_+	DNA-binding protein	Q5ZQZ9	Pseudomonas_phage	4.4e-10	54.4
WP_162817653.1\|1834018_1834309_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_114922245.1\|1834353_1835229_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	5.0e-46	40.8
WP_162817691.1\|1835221_1836988_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	9.2e-140	46.1
WP_049351481.1\|1837029_1838175_+	AAA family ATPase	A4JWN1	Burkholderia_virus	3.5e-100	49.2
WP_159071535.1\|1838185_1838437_+	hypothetical protein	NA	NA	NA	NA
WP_009426285.1\|1838433_1838628_+	hypothetical protein	NA	NA	NA	NA
WP_114922247.1\|1838624_1839125_+	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	4.1e-29	47.0
WP_114922248.1\|1839108_1839570_+	hypothetical protein	NA	NA	NA	NA
WP_042508121.1\|1839562_1839748_+	hypothetical protein	NA	NA	NA	NA
WP_114922249.1\|1839744_1840368_+	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	5.5e-55	52.2
WP_159071541.1\|1840583_1840892_+	DNA-binding protein HU	A3E2K9	Sodalis_phage	2.0e-18	58.4
WP_107853664.1\|1841061_1841538_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	6.1e-22	46.5
WP_107853663.1\|1841530_1841857_+	transcriptional regulator	Q6QIE8	Burkholderia_phage	8.1e-18	42.5
WP_114922250.1\|1842070_1843102_+	2-oxoacid:acceptor oxidoreductase	Q6QIB7	Burkholderia_phage	1.3e-56	42.0
WP_114922251.1\|1843160_1844099_+	hypothetical protein	A4JWK0	Burkholderia_virus	8.5e-52	42.2
WP_039405103.1\|1844147_1844486_+	DUF2190 family protein	NA	NA	NA	NA
WP_114922252.1\|1844488_1844776_+	hypothetical protein	NA	NA	NA	NA
WP_114922253.1\|1844779_1845205_+	DUF1320 domain-containing protein	A0A0M3LP98	Mannheimia_phage	1.4e-09	30.7
WP_114922254.1\|1845204_1845702_+	hypothetical protein	Q6QIB2	Burkholderia_phage	1.3e-22	35.3
WP_114922255.1\|1845713_1847120_+\|tail	phage tail protein	A4JWK5	Burkholderia_virus	2.7e-102	45.7
WP_114922256.1\|1847142_1847658_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	4.4e-42	49.1
WP_114922257.1\|1847764_1848061_+\|tail	phage tail assembly protein	Q6QIA8	Burkholderia_phage	1.3e-06	41.6
WP_107853653.1\|1848095_1848236_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_107853652.1\|1848237_1848438_-	hypothetical protein	NA	NA	NA	NA
WP_114922258.1\|1848479_1850516_+\|tail	phage tail tape measure protein	D5LGY4	Escherichia_phage	1.4e-75	32.4
WP_114922259.1\|1850475_1851123_+	hypothetical protein	A0A077K8S2	Ralstonia_phage	4.4e-31	50.8
WP_107853650.1\|1851122_1852019_+\|tail	phage tail protein	Q6QIA4	Burkholderia_phage	3.1e-19	34.1
WP_019272489.1\|1852015_1852237_+	membrane protein	Q6QIA3	Burkholderia_phage	3.6e-09	38.2
WP_114922260.1\|1852224_1853334_+	hypothetical protein	A4JWL3	Burkholderia_virus	1.8e-72	45.2
WP_114922700.1\|1853314_1853932_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	2.6e-25	39.2
WP_107853647.1\|1854004_1854382_+\|plate	phage baseplate protein	NA	NA	NA	NA
WP_114922261.1\|1854372_1855506_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	1.3e-57	39.4
WP_107853645.1\|1855509_1856088_+\|tail	phage tail protein	Q6QI98	Burkholderia_phage	1.8e-44	49.2
WP_107853644.1\|1857786_1858089_+	hypothetical protein	NA	NA	NA	NA
1857188:1857208	attR	NA	NA	NA	NA
WP_107853642.1\|1858410_1859181_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	6.1e-80	55.4
WP_107853639.1\|1862825_1863515_+	hypothetical protein	NA	NA	NA	NA
WP_107853638.1\|1863749_1864823_+	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_107971394.1\|1864828_1865731_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_107853636.1\|1866669_1868013_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.5e-53	32.7
WP_114922262.1\|1868351_1869329_+	methyltransferase	NA	NA	NA	NA
WP_107971391.1\|1869550_1872364_+	insulinase family protein	L7RBE7	Acanthamoeba_polyphaga_moumouvirus	2.9e-10	25.9
WP_114922263.1\|1872518_1873742_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	1.1e-78	44.2
WP_114922264.1\|1873809_1874496_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_114922265.1\|1874680_1875184_+	hypothetical protein	NA	NA	NA	NA
WP_114922266.1\|1875284_1876004_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003774731.1\|1876000_1876300_+	AzlD family protein	NA	NA	NA	NA
WP_114922267.1\|1876583_1877216_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_114922268.1\|1877410_1879465_+	LysM peptidoglycan-binding domain-containing protein	I1VXB7	Halocynthia_phage	3.3e-08	38.6
WP_114922269.1\|1879549_1880926_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	7.8e-54	31.9
WP_114922270.1\|1881048_1881570_+	hypothetical protein	NA	NA	NA	NA
WP_041961352.1\|1881626_1882466_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_002232195.1\|1882718_1883366_+	adenylate kinase	NA	NA	NA	NA
WP_114922271.1\|1883566_1884421_-	DUF1853 family protein	NA	NA	NA	NA
WP_040666418.1\|1884451_1885033_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.3e-74	66.3
WP_107971381.1\|1885107_1885299_-	AlpA family phage regulatory protein	A0A0R6PC61	Moraxella_phage	7.6e-08	45.6
WP_107971380.1\|1885549_1886788_-	DUF3396 domain-containing protein	NA	NA	NA	NA
WP_114922272.1\|1886881_1887787_-	hypothetical protein	NA	NA	NA	NA
WP_107853620.1\|1887800_1888343_-	hypothetical protein	NA	NA	NA	NA
WP_114922273.1\|1888887_1889985_-	sel1 repeat family protein	NA	NA	NA	NA
WP_114922274.1\|1889988_1892688_-	hypothetical protein	NA	NA	NA	NA
WP_114922275.1\|1892773_1895590_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.0e-23	23.3
WP_114922276.1\|1895646_1896612_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	5.2e-36	35.1
WP_107855344.1\|1896655_1899475_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.4e-94	33.2
WP_003760091.1\|1899546_1900035_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_107855346.1\|1900106_1901747_-	OmpA family protein	G3M9Z0	Bacillus_virus	2.1e-05	38.0
WP_107855348.1\|1901765_1902425_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_107855350.1\|1902426_1903773_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_003760099.1\|1903940_1904438_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_107855352.1\|1904478_1906008_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_060975458.1\|1906081_1906348_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_162817654.1\|1906400_1907549_-	hypothetical protein	NA	NA	NA	NA
WP_114922701.1\|1907961_1908912_-	hypothetical protein	NA	NA	NA	NA
WP_114922278.1\|1909012_1911394_-	hypothetical protein	NA	NA	NA	NA
WP_162817655.1\|1911390_1913934_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.0e-23	23.4
WP_114922280.1\|1914045_1915050_-	hypothetical protein	NA	NA	NA	NA
WP_114922281.1\|1915215_1916226_-	hypothetical protein	NA	NA	NA	NA
WP_162817656.1\|1916191_1917292_-	hypothetical protein	NA	NA	NA	NA
WP_162817657.1\|1917291_1919853_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	4.6e-23	23.3
WP_107855398.1\|1921289_1921703_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_070497194.1\|1921702_1922242_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_070497192.1\|1922262_1923372_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_003758395.1\|1923335_1925102_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_3

2228550 : 2297456

Mannheimia_phage(15.79%)

plate,tRNA,head,capsid,integrase,transposase,tail,terminase

attL 2253341:2253363|attR 2298532:2298554

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114922412.1\|2228550_2229582_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_114922725.1\|2229589_2230216_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.7e-25	38.1
WP_114922413.1\|2230407_2232135_+	exodeoxyribonuclease V subunit alpha	A0A1P8DII4	Virus_Rctr197k	2.6e-22	37.3
WP_107854694.1\|2232242_2232740_+	hypothetical protein	NA	NA	NA	NA
WP_107854695.1\|2232922_2233366_+	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_003771954.1\|2233370_2233622_+	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_003771952.1\|2233704_2234163_+	hypothetical protein	NA	NA	NA	NA
WP_114922414.1\|2234314_2234644_-	hypothetical protein	NA	NA	NA	NA
WP_049248545.1\|2234687_2234936_-	hypothetical protein	NA	NA	NA	NA
WP_107854696.1\|2235236_2235575_-	hypothetical protein	A0A1V0SED0	Indivirus	1.6e-05	56.2
WP_114922415.1\|2235718_2236219_-	DUF1841 family protein	NA	NA	NA	NA
WP_114922416.1\|2236308_2236767_-	hypothetical protein	NA	NA	NA	NA
WP_114922417.1\|2236912_2237914_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_107970403.1\|2237982_2238195_-	(Na+)-NQR maturation NqrM	NA	NA	NA	NA
WP_114922418.1\|2238191_2239247_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_114922419.1\|2239949_2240504_-	DUF1287 domain-containing protein	NA	NA	NA	NA
WP_114922420.1\|2240613_2241234_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_114922421.1\|2241471_2242314_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_107854704.1\|2242338_2242569_-	hypothetical protein	NA	NA	NA	NA
WP_114922422.1\|2242836_2243733_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_107854706.1\|2243935_2245009_+	multidrug transporter	NA	NA	NA	NA
WP_114922726.1\|2245352_2247008_+	AMP-binding protein	NA	NA	NA	NA
WP_114922423.1\|2247000_2249313_+	MMPL family transporter	NA	NA	NA	NA
WP_041961311.1\|2249486_2250905_+	TIGR00341 family protein	NA	NA	NA	NA
WP_114922424.1\|2251155_2252400_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_114922425.1\|2252531_2253335_+	sel1 repeat family protein	NA	NA	NA	NA
2253341:2253363	attL	NA	NA	NA	NA
WP_114922426.1\|2253474_2253897_+	hypothetical protein	NA	NA	NA	NA
WP_114922427.1\|2253889_2255116_+	beta-ketoacyl-ACP synthase	NA	NA	NA	NA
WP_114922428.1\|2255096_2255600_+	thioester dehydrase	NA	NA	NA	NA
WP_114922429.1\|2255693_2258066_+	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	1.2e-142	38.5
WP_114922430.1\|2258163_2259003_-	hypothetical protein	A0A0R6PH56	Moraxella_phage	1.9e-79	50.7
WP_083774570.1\|2259084_2259198_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_114922431.1\|2259347_2259818_-	hypothetical protein	A0A0R6PGL8	Moraxella_phage	1.5e-25	43.8
WP_114922432.1\|2260425_2262333_-	hypothetical protein	A0A218M4H3	Pasteurella_phage	1.3e-11	38.0
WP_114922433.1\|2262335_2262902_-	YmfQ family protein	A0A0M3LQE1	Mannheimia_phage	1.2e-19	35.4
WP_114922727.1\|2262898_2263765_-\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	1.1e-48	40.6
WP_114922434.1\|2263962_2264316_-	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	2.8e-24	53.0
WP_114922435.1\|2264376_2265006_-\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	5.0e-32	46.5
WP_114922436.1\|2265006_2266146_-\|tail	phage tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	3.3e-82	45.3
WP_114922437.1\|2266129_2267497_-	hypothetical protein	F6MIL2	Haemophilus_phage	2.0e-41	29.4
WP_114922438.1\|2267496_2269524_-\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	2.0e-50	34.0
WP_114922439.1\|2269656_2269842_-	hypothetical protein	NA	NA	NA	NA
WP_114922440.1\|2269863_2270523_-	Rha family transcriptional regulator	A0A0P0HSR5	Acinetobacter_phage	1.5e-23	57.8
WP_114922441.1\|2270652_2270847_-	hypothetical protein	NA	NA	NA	NA
WP_114922728.1\|2271180_2271663_-	hypothetical protein	NA	NA	NA	NA
WP_162817672.1\|2271947_2272121_-	DUF1045 domain-containing protein	NA	NA	NA	NA
WP_114922442.1\|2272117_2272366_-	hypothetical protein	NA	NA	NA	NA
WP_114922443.1\|2272323_2272713_-	hypothetical protein	NA	NA	NA	NA
WP_114922444.1\|2273039_2273414_-\|tail	phage tail protein	F6MIK8	Haemophilus_phage	3.3e-23	44.4
WP_114922445.1\|2273427_2274855_-\|tail	phage tail protein	B7SDP8	Haemophilus_phage	2.5e-87	42.7
WP_114922446.1\|2274854_2275043_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_114922447.1\|2275039_2275708_-	DUF1834 family protein	NA	NA	NA	NA
WP_114922448.1\|2275691_2276117_-	gp436 family protein	A0A2K9VH41	Faecalibacterium_phage	4.0e-09	39.8
WP_114922449.1\|2276113_2276587_-	hypothetical protein	NA	NA	NA	NA
WP_114922450.1\|2276624_2277527_-\|head	head protein	A0SMP3	Pseudomonas_virus	9.5e-109	64.8
WP_114922451.1\|2277548_2278613_-	transcriptional regulator	A0A0M5N0Q6	Ralstonia_phage	1.2e-30	34.3
WP_114922452.1\|2278821_2279319_-	phage virion morphogenesis protein	A0A0M3LSP9	Mannheimia_phage	4.9e-14	38.0
WP_114922453.1\|2279446_2280817_-\|capsid	minor capsid protein	B7SDN5	Haemophilus_phage	5.4e-39	36.6
WP_114922454.1\|2280809_2282366_-	DUF935 domain-containing protein	A0A0M3LRU4	Mannheimia_phage	1.8e-131	46.7
WP_162817673.1\|2282444_2284064_-\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	7.4e-221	70.5
WP_114922455.1\|2284075_2284270_+	hypothetical protein	NA	NA	NA	NA
WP_002237246.1\|2284266_2284773_-	DUF1804 family protein	A0A0A1IX73	Pseudomonas_phage	7.1e-45	56.2
WP_114922456.1\|2284775_2284991_-	hypothetical protein	NA	NA	NA	NA
WP_107885581.1\|2284990_2285272_-	hypothetical protein	NA	NA	NA	NA
WP_114922457.1\|2285271_2285613_-	hypothetical protein	NA	NA	NA	NA
WP_114922458.1\|2285799_2286216_-	hypothetical protein	NA	NA	NA	NA
WP_114922459.1\|2286196_2286430_-	hypothetical protein	A0A0M4UKB4	Ralstonia_phage	4.3e-05	42.9
WP_114922460.1\|2286442_2286622_-	hypothetical protein	NA	NA	NA	NA
WP_114922461.1\|2286624_2287176_-	N-acetylmuramoyl-L-alanine amidase	U5PZX6	Acinetobacter_phage	3.1e-38	49.2
WP_114922730.1\|2287307_2287949_-	hypothetical protein	NA	NA	NA	NA
WP_114922462.1\|2287987_2288434_-	hypothetical protein	A0A2D1GNW5	Pseudomonas_phage	3.2e-09	31.2
WP_114922463.1\|2288430_2288868_-	DUF1018 domain-containing protein	X4YFN0	Pseudomonas_phage	5.2e-20	40.5
WP_114922464.1\|2288988_2289189_-	DNA-binding protein HU	A4JWM7	Burkholderia_virus	7.4e-06	61.9
WP_114922465.1\|2289444_2290329_-	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	7.0e-40	37.1
WP_114922731.1\|2290318_2290609_-	hypothetical protein	A0A291LA00	Bordetella_phage	1.7e-06	42.4
WP_114922466.1\|2290645_2290879_-	hypothetical protein	NA	NA	NA	NA
WP_114922467.1\|2290880_2291420_-	host-nuclease inhibitor protein Gam	L7P7T1	Pseudomonas_phage	1.6e-31	47.4
WP_114922468.1\|2291767_2292298_-	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	1.8e-30	53.3
WP_114922469.1\|2292294_2292621_-	hypothetical protein	NA	NA	NA	NA
WP_114922470.1\|2292604_2292853_-	hypothetical protein	NA	NA	NA	NA
WP_114922471.1\|2292849_2293113_-	hypothetical protein	NA	NA	NA	NA
WP_114922472.1\|2293186_2294101_-	AAA family ATPase	A0A2D1GNS0	Pseudomonas_phage	3.6e-55	45.2
WP_114922473.1\|2294142_2296179_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0M3LPN5	Mannheimia_phage	1.6e-108	40.1
WP_070455129.1\|2296272_2296515_-	transcriptional regulator	M4MHI1	Vibrio_phage	9.3e-11	50.0
WP_114922474.1\|2296748_2297456_+	helix-turn-helix transcriptional regulator	A0A0A1IWY4	Pseudomonas_phage	5.3e-22	32.6
2298532:2298554	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP031255

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection