CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP029693	Pseudomonas putida strain JBC17 chromosome, complete genome	3 crisprs	DEDDh,csa3,DinG,WYL,cas3,PD-DExK,RT	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP029693_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029693_1

633143-633237

Orphan

Consensus_repeat	Method
TCCATCGCGAGCAGGCTCGCTCCTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029693_1

>merge|NZ_CP029693|1|633143-633237|CRISPRCasFinder
TCCATCGCGAGCAGGCTCGCTCCTACATGGGGCGGTGGGGTGCCAGGTGTCCCGCGTTATCGTTGGCGTCCATCGCGAGCAGGCTCGCTCCTACA

>NZ_CP029693|1|1|633143-633237|CRISPRCasFinder
TCCATCGCGAGCAGGCTCGCTCCTACA	TGGGGCGGTGGGGTGCCAGGTGTCCCGCGTTATCGTTGGCG
TCCATCGCGAGCAGGCTCGCTCCTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029693.1\|WP_110962730.1\|634199_635792_-\|DUF3300-domain-containing-protein	unknown	unknown	gnl\|CDD\|378701
NZ_CP029693.1\|WP_110962728.1\|629086_629935_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|180458
NZ_CP029693.1\|WP_110962733.1\|636916_637495_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_162634830.1\|635784_636171_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_110967824.1\|633252_634173_-\|DUF2950-domain-containing-protein	unknown	unknown	gnl\|CDD\|371539
NZ_CP029693.1\|WP_110962722.1\|618668_619613_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182183
NZ_CP029693.1\|WP_110962724.1\|622361_623255_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP029693.1\|WP_110962735.1\|637978_638908_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NZ_CP029693.1\|WP_110962726.1\|625613_627257_-\|acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236239
NZ_CP029693.1\|WP_110962732.1\|636207_636879_-\|MarC-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236814
NZ_CP029693.1\|WP_110962734.1\|637552_637915_-\|DUF5064-family-protein	unknown	unknown	gnl\|CDD\|374738
NZ_CP029693.1\|WP_110962736.1\|639054_640065_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NZ_CP029693.1\|WP_110962729.1\|630178_633067_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP029693.1\|WP_110962721.1\|617951_618575_+\|NIPSNAP-family-protein	unknown	unknown	gnl\|CDD\|311781
NZ_CP029693.1\|WP_110962725.1\|623414_625466_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99781
NZ_CP029693.1\|WP_110962723.1\|619734_620739_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381378
NZ_CP029693.1\|WP_110962727.1\|627556_629002_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|223740
NZ_CP029693.1\|WP_110962720.1\|616829_617846_+\|succinylglutamate-desuccinylase	unknown	unknown	gnl\|CDD\|349468
NZ_CP029693.1\|WP_110962737.1\|640132_641389_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NZ_CP029693.1\|WP_110962738.1\|641419_642847_-\|arginine-ornithine-antiporter	unknown	unknown	gnl\|CDD\|163522

Protein	Function_ID	Function_description	E-value
NZ_CP029693.1\|WP_110962730.1\|634199_635792_-\|DUF3300-domain-containing-protein	gnl\|CDD\|378701	pfam11737, DUF3300, Protein of unknown function (DUF3300). This hypothetical bacterial gene product has a long hydrophobic segment and is thus likely to be a membrane protein.	5.04399e-117
NZ_CP029693.1\|WP_110962728.1\|629086_629935_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|180458	PRK06194, PRK06194, hypothetical protein; Provisional.	1.96917e-45
NZ_CP029693.1\|WP_110967824.1\|633252_634173_-\|DUF2950-domain-containing-protein	gnl\|CDD\|371539	pfam11453, DUF2950, Protein of unknown function (DUF2950). This is a bacterial family of uncharacterized proteins.	6.57554e-146
NZ_CP029693.1\|WP_110962722.1\|618668_619613_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182183	PRK09986, PRK09986, LysR family transcriptional regulator.	4.0327e-57
NZ_CP029693.1\|WP_110962724.1\|622361_623255_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.22829e-89
NZ_CP029693.1\|WP_110962735.1\|637978_638908_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NZ_CP029693.1\|WP_110962726.1\|625613_627257_-\|acetolactate-synthase-large-subunit	gnl\|CDD\|236239	PRK08322, PRK08322, acetolactate synthase large subunit.	0
NZ_CP029693.1\|WP_110962732.1\|636207_636879_-\|MarC-family-NAAT-transporter	gnl\|CDD\|236814	PRK10995, PRK10995, MarC family NAAT transporter.	1.19521e-95
NZ_CP029693.1\|WP_110962734.1\|637552_637915_-\|DUF5064-family-protein	gnl\|CDD\|374738	pfam16703, DUF5064, Domain of unknown function (DUF5064). This is found in Pseudomonas species. Several members are annotated as being acetyl-CoA carboxylase alpha subunit, but his could not be confirmed.	1.34087e-46
NZ_CP029693.1\|WP_110962736.1\|639054_640065_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP029693.1\|WP_110962729.1\|630178_633067_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	3.01525e-91
NZ_CP029693.1\|WP_110962721.1\|617951_618575_+\|NIPSNAP-family-protein	gnl\|CDD\|311781	pfam07978, NIPSNAP, NIPSNAP. Members of this family include many hypothetical proteins. It also includes members of the NIPSNAP family which have putative roles in vesicular transport. This domain is often found in duplicate.	4.99962e-24
NZ_CP029693.1\|WP_110962725.1\|623414_625466_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|99781	cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P)H binding domain of flavohemoglobin. Flavohemoglobins have a globin domain containing a B-type heme fused with a ferredoxin reductase-like FAD/NAD-binding domain. Flavohemoglobins detoxify nitric oxide (NO) via an NO dioxygenase reaction. The hemoglobin domain adopts a globin fold with an embedded heme molecule. Flavohemoglobins also have a C-terminal reductase domain with bindiing sites for FAD and NAD(P)H. This domain catalyzes the conversion of NO + O2 + NAD(P)H to NO3- + NAD(P)+. Instead of the oxygen transport function of hemoglobins, flavohemoglobins seem to act in NO dioxygenation and NO signalling.	3.61693e-99
NZ_CP029693.1\|WP_110962723.1\|619734_620739_+\|aldo/keto-reductase	gnl\|CDD\|381378	cd19152, AKR_AKR15A, AKR15A family of aldo-keto reductase. The AKR15 family includes Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD), Pseudomonas sp. D-threo-aldose 1-dehydrogenase (FDH), and similar proteins. PLD (EC1.1.1.107) catalyzes irreversible oxidation of pyridoxal. FDH(EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose, and to a much lesser degree, D-arabinose. FDH (EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose, and to a much lesser degree, D-arabinose.	2.03146e-145
NZ_CP029693.1\|WP_110962727.1\|627556_629002_+\|mechanosensitive-ion-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	4.40907e-30
NZ_CP029693.1\|WP_110962720.1\|616829_617846_+\|succinylglutamate-desuccinylase	gnl\|CDD\|349468	cd06250, M14_PaAOTO_like, Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA)-like subfamily; subgroup includes Pseudomonas aeruginosa AotO. An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding P. aeruginosa AotO was characterized as part of an operon encoding an arginine and ornithine transport system, however it is not essential for arginine and ornithine uptake.	1.11561e-72
NZ_CP029693.1\|WP_110962737.1\|640132_641389_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_CP029693.1\|WP_110962738.1\|641419_642847_-\|arginine-ornithine-antiporter	gnl\|CDD\|163522	TIGR03810, arginine-ornithine_antiporter, arginine-ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines].	0

>NZ_CP029693.1|WP_110962729.1|630178_633067_+|EAL-domain-containing-protein
MSFRQLTGSPRQSNDCDLVASQLIGNSETAAVAYAGNDDMIEQLLDSARNWPHTTAWAVYRAGEQMYLVGQGDPQGQWPASVSNEEFDAFCRTRRLQRWPTGKGESVLGWLLAPLDNDAQPALAEFAQRLGIQVQTNTLARAQITQRVLYEITYLASSTRDRSVFLVGVHQLLASLIDAENFYLALYDPHTHKIDYPYYVDKIDVDALESSNYEYLDPKRLSLTGQVLTSGQPLLIDSAGILAAQAEGRFYCVGDRPEFWMGAPLKNASDEVFGMLAMQVYEVSRTYSAEDRALFLVVARHVAMALDRILHREDLEQTVMRRTLELSAVNDALRQEVAERERAEHLQSALFQIAELSSQPGDMTEFFQTLHGIVGDLLFAQNFYIAMFDDATGEVTFPYYVDERQTVCPTARRGRRGLTEYVIRQRRPCLVDYDEADRLNAQGEIEIDEAVRAYSWLGIPLFDGDGVRGVLAVQSYTSQVSYSQRDQELLTFVSRHIDTALSRRTAAEAIHAANLKLEARVQNRTRELDHANAKLQHENSHDALTGLANRTYLQQRLNLAWSHFESDGGQLAVMFIDLDRFKMVNDSFGHHFGDLLLMHAAHRLRSCLRETDMLARLGGDEFSVLAPEAPMETLIEIGERILAAFDLPFFINGHQVFSSCSIGIVSADSQFHNEPADLLRDADAAMYRVKSAGRDSYAVFNQEVRREVNDQVEREGALRNALKRTDELLPYFQPIVSVETGELLALEALIRWHQPGGRVIAPGEFLPDVEGLRLIGRLDLYMLTRIAVILAQPEHANWPAVHVNCSSYSMARPEFAGEVLALLARHGVEPSRICLELTEGALVAEPAIARLTMQQLADNGMSVVLDDFGAGFSSLSYVHQYRFSGLKIDKSFILELTSSPRSRAIVRAIVRMAESLDLSVVAEGVENEETLNLLRDMGAGQAQGYYFAKPMSLEALLASSLL
>NZ_CP029693.1|WP_110962728.1|629086_629935_+|SDR-family-NAD(P)-dependent-oxidoreductase
MSHPVLKPGAVAVITGGAAGIGLAAAKRFAALGMRVCIADLGAQKLLDAAEQIAQLTRAGAEDVLAIEADVSRDADLGNLRKAVLERFGAVDLLMSNAGIQPPTTALDSANWQQMIEVNLWGVIRSTQTFVPGMVEQGRSGLVIITGSKQGITTPPGNPAYNVSKAGVKVFSESLQHQLRNTPGCAINAHLLIPGFVFTELAAGGRKDKPAGAWTSEQTVDFMLERLQAGDFYILCPDNDVPRALDERRILWAAGDIVENRPPLSRWHADYGGAFEAFVKRR
>NZ_CP029693.1|WP_110962727.1|627556_629002_+|mechanosensitive-ion-channel
MLSMLTESPLIGALVLILIDTVMWRVISSRRHNWKVLTRLIIFVLYSLLLFNEGLSPLEPVPAGDNVPLQMAATVLEIGWWLFGARTLTVIIGAVMMQRVGHTGRLIQDLLGAGLFLIAVIAALAYVLNLPVKGVLATSGALAIIVGLALQSTLSDVFSGIVLNTTKPYQIDDWIAIDGTEGRVTDIDWRATFLQTSQGSMIVIPNSMAAKAKITNFSRPSDMFGVSISLLISPHVRPNRVFDALERAAQGCRILLTKPAPKVTIKSTGSGGVEYEVSGFVISMDQKRAVRNQLFDLAYRHLLAAGINWLSTVETTEPVRHSRARALLDHSSIFSTTLSDEEKDKVSQNMTRQAFQPGEMILPGGEISEILYIIESGVVTVALSRGGVKFEAGRMGPGEVIGEAGIVSGKALPADFAALTFCYLYRIEKEYFRPCVEARHDISEAMKALMDFRLQISQTLLQEEPKAIEKKGFLQWLRNRV
>NZ_CP029693.1|WP_110962726.1|625613_627257_-|acetolactate-synthase-large-subunit
MAKAADVVVQCLENEGVEFVFGIPGEENLDLLESLRKSPIRLVLTRHEQSAGFMAATYGRLTGKTGVSLSTLGPGATNLVTAGAYAYLGGMPMLMITGQKPIKKSKQGRFQILDVVGMMQPLTKYTHQLASADNIPSRVREAFRLSLEEKPGAVHLELPEDIAAEQTESMPIPPSLVRRPLAEHKSIQGAVEKLKAARSPILVIGAGANRKMTCKVLKQLIDNTGIPFVTTQMGKGVVDERHPRFLGNAALSAGDFVHRAVEAADLIVNIGHDVIEKPPFFMVRGGTEVIHINFRSAEVDPVYFPQIEVVGDIANAVWQIGEALQVQPHWDFSRLMAIREANEAQVIEGADDNRFPIYPQRFVADVRRALPSDGIVALDNGIYKIWFARNYKAHKPNTVLLDNALATMGAGLPSAMAANLVYPDRPVVAVCGDGGFMMNSQEMETAVRLKMNLTVIILRDDGYGMIRWKQANMGFTDFGLDYGNPDFVKYAEAYGAKGHRVDSAEGFLPLLERCIGEPGVHLIDCPVDYSENDFILNSELKRRSALV
>NZ_CP029693.1|WP_110962725.1|623414_625466_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MDDVTKAQPSPWHEGELTLQRSVGAVEMMVGVGQRQMSRTWMPDQHREFYAQLPFVILGAVDRQGDVWATIRTGQPGFMHSPEPERLHIQLEPQPNDPAQAGMQEGDAIGMLGIELHTRRRNRMNGNVLHQLDNGIEIAVTQAYGNCPRYINLRQYEFVDQIEDVARELTATDPLVRRLTTTADSFYVATYVERDGQNQVDASHRGGKPGFVRIEEDGALTIPDFSGNLFFNTLGNILLNPRAGLLFIDFQNGDLLQMSGTAEVLLDDPEIAAFQGAERLWRFRPQRIVHRQAAIPLRWVDKPEGDSPNSMMTGSWEQAAERLQAEALRTHWRALRVARIVDESRSIRSFYLEPGDGVGLSGFEPGQHLPIRIQLEGQKAPSIRTYSVSSAPSDQFLRISVKRDGLVSSHLHERVQVGDWIEGRAPQGHFTVNASERRPLVLLAAGVGVTPLLSMLREVVYEGKRVNRMRPTWVVQSSRSVDDLAFRKEVDELVALAGDKVKVLRVVSQPPLDGGGDGYDVAGRIDVELLKTLLPLNDYDFYLCGPGSFTQALYDGLRKIRIPDDRIHAETFGPSTLVRDAEVSVPAAQQVPVSTESVKVLFSTSGKEARWEPGTGTLLELAEARGLSPEFSCRGGSCGTCKTRMSSGQVHYLNTPEPGLAADEVLICCAVPAQGSEPLVLDI
>NZ_CP029693.1|WP_110962724.1|622361_623255_+|LysR-family-transcriptional-regulator
MYKSGLIELEVVLAVARRRGFRAAATDLDMSTTAVSNAVAGLEARLGTRLFHRTTRSVSLTEAGQRFVEQIEPAVAHIQHAMQNLHADQSVLTGTLRINSSLGAALMVFQPILLKFLRRHPGMTVDITTEGKSVDIIAEGFDAGLRQGTRVPRDMIRVPITRDIPMAVVGSPGYFSSHPRPLIPEDLLNHACIRARLPGGVASPWSFIRENQPFTVEVQGPLVLDTPLLMVEAARQGAGLAQLPEFYVQDELAEGRLVKVLEPWTPAAAGLSLYYSGHRHIPAALRALIELIHEQGS
>NZ_CP029693.1|WP_110962723.1|619734_620739_+|aldo/keto-reductase
MSLKDKLPGVLGFGTAPLGNMFRDIPETEALATVDAAWDAGVRYFDTAPFYGAGLSEIRLGNALQKYKRDDYVLSTKVGRVILDELDNSARDLGEKSGVFEHGLRNKIVNDYSADATERSIEDSLKRLKTDRLDIVWIHDIAQDFYGDQWLQYFEQARTGAFKVLDRLRDEGVIKAWGLGVNRVEPIELTLDLEEARPDGMLLAGRYTLLDHERALQRVMAQAKSQNVEIVVGGPYSSGILAGGAHFEYQKASPQIIQKVEHIKRIAKAHGVDIKAAALQFSLANPAVAAVIPGASRPERIAEDVAALKAVIPAAFWAELRSAGLIAANAPVPA
>NZ_CP029693.1|WP_110962722.1|618668_619613_-|LysR-family-transcriptional-regulator
MIDLRQLRYFIVTAEEEHVGRAAERLHISQSPLSRQIAQLEERLGLVLFERSQQRIRLTTDGRTFLTEARALLTHANRLESLGKRLGRGEEGGLCIGYIENAMHANVLPAALREVREIRPGVHIALHHLSSADQLEGLRQRSLDVALVSEPPGNDDPELTHFQLLEDPMLLALPANHPLAGTERLLPTHVQDLDWIGVKYSQGENHHADFVAACIRAGFTPQIRLEAAEPYTALGLVAAGLGVAMTQKSLNQAAHPGVVFRELPWLTFTMPLWVAWHRVTLRPLVETFRVILTGPEPAPFVAPPQTIASTLAPL
>NZ_CP029693.1|WP_110962721.1|617951_618575_+|NIPSNAP-family-protein
MRLFELITFTVKVRTVAQALARIETALAEPEVGGTLMGCWASEIGQLNQIALLRGFADEGARQAERERFLLDGRAFGINEFITDLRIENYSLFPFLKPLSPGKHGPCYELRVYDLISAGLQPTLDGWAKAIEARTAEQYSPVYAAFYATDGALPRYLHIWPWANLEQRLQVRTQAVADGVWPPENSGPQLRDMRSSIYLPAAFSPLA
>NZ_CP029693.1|WP_110962720.1|616829_617846_+|succinylglutamate-desuccinylase
MAQDVSFNVHNNNGDAVQVGAWRYTGSGNGPTVHLQAGVHADEIAGMLVLHLLMQRLQVAEQQGRIKGSVTVVPQANPLGIGQFRQGRILGRHHDATGHNFNRGFDQSAAKAQPSTVVEHWQKQLVQLAATADVMLDLHTDDEALPYLYVHRSFWPRGRDLAVAMKMDVAIIWDEGGDGSFEETIIAPWLREGSADRHMAATLELRGQGDVNDRFAEQDAEGLYAWLCGYGVIDDSPAPADWPVEAVEMGHMETILAPQPGVLIFERELGDLVEEGQRFARILRRPGDPSSEVVLHAEQTGRLVTRYRDRLIGQGMGVAKFTGTRQSRNWSGGLLDPN
>NZ_CP029693.1|WP_110967824.1|633252_634173_-|DUF2950-domain-containing-protein
MNLLAPALALTASLLWSAVATAQEAFSTPEKAAEAFVKALGTEHADQARLTELLGEDWRNVVPREGVQREDVDAFLKQYHEQHQIEKPSDRKAILAVGPDNWTMPIPMVKDKNGWRFDMKAGAVEIRARRIGRNELSTVQSVLTYHDAQMEYATQDHDGDGALEYAQKIFSTPGEHDGLYWADDDSGQISPLGPLFGNASTLEDWHGYHFRILKGQGPSAPGGAYSYLIGDKMSRGFALIAWPAKYDDTGVMSFMISHDGQVFEKDLGPNGEKVALSMKLFDPDDSWKEVPTDQAPDQPTSLTQVP
>NZ_CP029693.1|WP_110962730.1|634199_635792_-|DUF3300-domain-containing-protein
MRIPLFYALSVVVLMNGVTCLAQAGDTAPAAPAPVPASTPAATDAAPAAAQAKDPVFNQEQLDQMTAPIALYPDPLLAQLLMASTYPGEVAEAVTWSKANPKATGDDAVKKVANQPWDPSVQSLVAFPQVLATLGQDPVWVQRLGDAFLAQPDDVMASVQRLRRQAQAAGNLQSNQYQNVTVQNITPAAPAPESSTSSSSAPAPAPASSSSTIVIQPADPQVVYVPTYNPTTTYGTWAYPASPPVYYPPPPAYYPGQALMAGLAFGTGVAIIGSLWGDCDWGNNDVDIDVNRYNNINRNNQINSNRWQHNAAHRDGVPYRDNRSRQQFGRQLNGAEQRQAFRGDNAQRAQAREKARGAMDRSGFERPATTNREARQQARQAQSGMGDRNRLQGGTDRPRTADRGQGLDRNQIANRNQGGDRNQIANRNQGGERHVRDNQQPRRQDAQVNQRRQDSTQARQNFQKRPAASPGSARNNAFAGARSPSQSNAQALRGRASQASAQRPSGMRGGGHQVSRPSAPMRSGRGGGRR
>NZ_CP029693.1|WP_162634830.1|635784_636171_+|hypothetical-protein
MRIVLSISFDQFPQFGAQPECPPSVLDIPGFLTAFTPGLSFILPAFRVALGVGRSTILIGLARILTGFLPGIARGAALFGAIGGGPGCTVHQQQKNHRQPNRHPWHFHDSISHEPGISVQLIFRLSAG
>NZ_CP029693.1|WP_110962732.1|636207_636879_-|MarC-family-NAAT-transporter
MTDLFNAIGLGLLALLPLTNPPTTVALFLALSKGLSQKEKDTQAFLTSFYVFLIMAVTYYIGALVMDAFNISIPGLRMAGGGILVIMGLKMLFPPPPQPSVPGSAAEEPTFAFIPLAMPSTAGPGTIAMIISSAATIKNNTFFPPWVLLVAPPLIFLLTALILWICLRCSGFIMKIMGQSGIEAISRLMGFLLVCMGAQFAINGSVEILQTLIDHNAHLLRPQ
>NZ_CP029693.1|WP_110962733.1|636916_637495_-|hypothetical-protein
MKPIRSLASAVALASLFSTACLTAHAADIPLGSRAIEGHIVSQVLAVDPANYQVTIEGPDKQPVPLQLTDQAKNLHNLKVGDKVDIQVIRSVAYVLDTEVGGAPSVSKEAMTVRSTKDNPNPGGEAVRQVKVTSKITKVDLKTHEVTLMPPEGKLKVVKVEDPQLQERMKKLKVGQTVDAVYTEVLQVQTSR
>NZ_CP029693.1|WP_110962734.1|637552_637915_-|DUF5064-family-protein
MAMFEPGHLHIERHALNDKDVSYNIHLNYEINQDPKQGKGMLFRMHGSIQGKDMDEKFFLPKEEAYNFARNVTQIAEKYGIPKSMSNIGSMHKHYDLMFEDIRAQLNMKSGDTVNIEHFE
>NZ_CP029693.1|WP_110962735.1|637978_638908_-|carbamate-kinase
MRIVVALGGNALLRRGEPMTADNQRANIRIATEQIAKIHPGNQLVIAHGNGPQVGLLSLQAAAYTSVTPYPLDVLGAETEGMIGYIIEQELGNLLDFEVPFATLLTQVEVDANDPAFKNPTKPIGPVYSKADAEKLAAEKGWAIAPDGDKYRRVVASPKPKRIFEIRPIKWLLEKSSIVICAGGGGIPTMYTSPGKLEGVEAVIDKDLCSALLAEQLEADLLVIATDVNAAFIDYGKPTQKAIAQAHPDELERLGFAAGSMGPKVQAASEFARHTGRVAVIGSLSDIEAIVQGKAGTRVSTATPGISYR
>NZ_CP029693.1|WP_110962736.1|639054_640065_-|ornithine-carbamoyltransferase
MAFNIHNRNLLSLEHHTTRELRYLLDLSRDLKRAKYTGTEQQHLKGNNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMIADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRICAPKALLPADDLVARCKKYAEESGARITLTEDPKVAVKGVDFIHTDVWVSMGEPVEAWAERIQQLLPYQVNAEMMKATGNPRTKFMHCLPAFHNSDTKVGKQIAEQYPHLKNGIEVTDDVFESPACIAFEQAENRMHTIKAILVSTLADL
>NZ_CP029693.1|WP_110962737.1|640132_641389_-|arginine-deiminase
MTTEKVKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVTKMRERGIDVVEMHNLLTDIVAIPEALDWILSRKITPDTVGVGLINEVDSWLRSLEPRHIAEFLIGGVSGDDLPDAFGGKAIQMFRDFLGNSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPQFTNADFQIWYGDPDKDHGASTLEGGDVMPIGNGVVLIGMGERSSRQAIGQLAINLFKNKAVEKVVVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVNQIVGFTLRPDESKPGGIDIRREESHFLDVVAKALNLKELRVVQTGGNSFAAEREQWDDGNNVVAVEPGVVIGYDRNTYTNTLLRKAGVEVITISAGELGRGRGGGHCMTCPIIRDPIDY
>NZ_CP029693.1|WP_110962738.1|641419_642847_-|arginine-ornithine-antiporter
MSESPGKLRLGALVALVVGSMIGGGIFSLPQNMAASADVGAVLIGWAITAVGMLTLAFVFQTLANRKPDLDGGVYAYAKAGFGDYMGFSSAWGYWISAWLGNVGYFVLLFSTLGYFFPIFGEGNTVAAIIGASVLLWAVHFLVLRGIKEAAFINLVTTVAKIVPLLLFVLIAIFAFKLDIFTADIWGVKNPDLGSVMNQVRKMMLVTVWVFIGIEGASIFSARAEKRSDVGRATVIGFITVLLFLVLVNVLSLGIMTQPELAKLQNPSMAAVLKHVVGDWGAVLISVGLIISLLGALLSWVLLCAEIMFAAAKDHTMPEFLRKENANHVPVNALWLTNAMVQLFLIITLFSASTYLSLIYLATSMILVPYLWSAAYALLLAVRGESYENAASERSKDLFIGAIALIYAIWLIYAGGMKYLLLSALLYAPGVILFAKAKLELKQPVFTHVEKLIFAAVVVGALVAAYGLYDGFLTL

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Crispr_ID: NZ_CP029693_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029693_2

6425002-6425159

Orphan

Consensus_repeat	Method
TCTGGTTCTGGGTGATGGTGCTG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP029693_2

>merge|NZ_CP029693|2|6425002-6425159|CRISPRCasFinder
TCTGGTTCTGGGTGATGGTGCTGCCGTCTTCGAACAGTTGCTCGGCGTAGCCGGCGTTGTAGTCACCGGTCTGGTTCTGGGTAATGGTGCTGGTGGCGGTGTCCTGTACGGCGGCCGCGTCGTTGCCGGTGCCGATCTGCAACTGGGTGGCGGTGGCG

>NZ_CP029693|2|2|6425002-6425159|CRISPRCasFinder
TCTGGTTCTGGGTGATGGTGCTG	CCGTCTTCGAACAGTTGCTCGGCGTAGCCGGCGTTGTAGTCACCGG
TCTGGTTCTGGGTAATGGTGCTG	GTGGCGGTGTCCTGTACGGCGGCCGCGTCGTTGCCGGTGCCGA
TCTGCAACTGGGTGGCGGTGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029693.1\|WP_110967468.1\|6419336_6419726_+\|curli-production-assembly/transport-protein-CsgE	unknown	unknown	gnl\|CDD\|236678
NZ_CP029693.1\|WP_110967466.1\|6418451_6418826_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP029693.1\|WP_110967465.1\|6417973_6418447_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP029693.1\|WP_110967470.1\|6420170_6421031_+\|curli-production-assembly/transport-protein-CsgG	unknown	unknown	gnl\|CDD\|185106
NZ_CP029693.1\|WP_110967464.1\|6416114_6417971_+\|secretion-type-II-protein	unknown	unknown	gnl\|CDD\|227133
NZ_CP029693.1\|WP_110967469.1\|6419722_6420139_+\|curli-production-assembly-protein-CsgF	unknown	unknown	gnl\|CDD\|371165
NZ_CP029693.1\|WP_162634944.1\|6422530_6423703_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_110967480.1\|6434352_6435513_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|239266
NZ_CP029693.1\|WP_110967476.1\|6425844_6428088_-\|cadherin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|333740
NZ_CP029693.1\|WP_110967463.1\|6415599_6416118_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP029693.1\|WP_110967484.1\|6439259_6440063_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP029693.1\|WP_110967478.1\|6429793_6431242_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP029693.1\|WP_110967467.1\|6418800_6419340_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP029693.1\|WP_110967471.1\|6422002_6422263_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_110967482.1\|6437077_6438508_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP029693.1\|WP_110967483.1\|6438607_6438994_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_110967477.1\|6428123_6429470_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_110967479.1\|6431554_6434356_+\|multicopper-oxidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|259934
NZ_CP029693.1\|WP_110967481.1\|6435615_6437109_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236674
NZ_CP029693.1\|WP_110967475.1\|6425323_6425785_-\|curlin	unknown	unknown	gnl\|CDD\|182242

Protein	Function_ID	Function_description	E-value
NZ_CP029693.1\|WP_110967475.1\|6425323_6425785_-\|curlin	gnl\|CDD\|182242	PRK10101, csgB, curlin minor subunit CsgB; Provisional.	6.27713e-18
NZ_CP029693.1\|WP_110967466.1\|6418451_6418826_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	9.14725e-18
NZ_CP029693.1\|WP_110967478.1\|6429793_6431242_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.89775e-40
NZ_CP029693.1\|WP_110967470.1\|6420170_6421031_+\|curli-production-assembly/transport-protein-CsgG	gnl\|CDD\|185106	PRK15184, PRK15184, curli production assembly/transport protein CsgG; Provisional.	1.47076e-91
NZ_CP029693.1\|WP_110967468.1\|6419336_6419726_+\|curli-production-assembly/transport-protein-CsgE	gnl\|CDD\|236678	PRK10386, PRK10386, curli production assembly/transport protein CsgE.	1.12446e-62
NZ_CP029693.1\|WP_110967469.1\|6419722_6420139_+\|curli-production-assembly-protein-CsgF	gnl\|CDD\|371165	pfam10614, CsgF, Type VIII secretion system (T8SS), CsgF protein. The extracellular nucleation-precipitation (ENP) pathway or Type VIII secretion system (T8SS) in Gram-negative (diderm) bacteria is responsible for the secretion and assembly of prepilins for fimbiae biogenesis, the prototypical curli. Besides the T2SS that can be involved in the assembly of prototypical Type 4 pilus, the T4SS that can be involved in the biogenesis of the prototypical pilus T, the T3SS involved in the assembly of the injectisome and the T7SS involved in the formation of the prototypical Type 1 pilus, the T8SS differs in that fibre-growth occurs extracellularly. The curli, also called thin aggregative fimbriae (Tafi), are the only fimbriae dependent on the T8SS. Tafi were first identified in Salmonella spp and the controlling operon termed agf; however subsequent isolation of the homologous operon in E coli led to its being called csg. In the absence of extracellular polysaccharides Tafi appear curled, although when expressed with such polysaccharides their morphology appears as a tangled amorphous matrix. CsgF is one of three putative curli assembly factors appearing to act as a nucleator protein. Unlike eukaryotic amyloid formation, curli biogenesis is a productive pathway requiring a specific assembly machinery.	5.52271e-33
NZ_CP029693.1\|WP_110967464.1\|6416114_6417971_+\|secretion-type-II-protein	gnl\|CDD\|227133	COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion].	1.03686e-45
NZ_CP029693.1\|WP_110967480.1\|6434352_6435513_+\|c-type-cytochrome	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	8.26784e-43
NZ_CP029693.1\|WP_110967476.1\|6425844_6428088_-\|cadherin-like-domain-containing-protein	gnl\|CDD\|333740	NF012211, tand_rpt_95, tandem-95 repeat protein. This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.	6.09098e-09
NZ_CP029693.1\|WP_110967463.1\|6415599_6416118_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00215042
NZ_CP029693.1\|WP_110967484.1\|6439259_6440063_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.45797e-18
NZ_CP029693.1\|WP_110967467.1\|6418800_6419340_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.77674e-07
NZ_CP029693.1\|WP_110967482.1\|6437077_6438508_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	8.59394e-169
NZ_CP029693.1\|WP_110967479.1\|6431554_6434356_+\|multicopper-oxidase-domain-containing-protein	gnl\|CDD\|259934	cd13866, CuRO_2_BOD, The second cupredoxin domain of Bilirubin oxidase (BOD). Bilirubin oxidase (BOD) catalyzes the oxidation of bilirubin to biliverdin and the four-electron reduction of molecular oxygen to water. It is used in diagnosing jaundice through the determination of bilirubin in serum. BOD is a member of the multicopper oxidase (MCO) family that also includes laccase, ascorbate oxidase and ceruloplasmin. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.	5.11111e-58
NZ_CP029693.1\|WP_110967481.1\|6435615_6437109_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|236674	PRK10364, PRK10364, two-component system sensor histidine kinase ZraS.	5.96707e-39
NZ_CP029693.1\|WP_110967465.1\|6417973_6418447_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.38782e-15

>NZ_CP029693.1|WP_162634944.1|6422530_6423703_+|hypothetical-protein
MPAALFSLGARAIGPPVDRKALIPTKVSDLGSILSFPGFSFSDFECIIKDKGINTDCLSDAFKDELILLCEYFKGDSKQFFCGQLIGWAERNVSLIALCDRTEAGDAGIIVAIQKYAVQQLFLPDTGNGASLDRWQLLKDCFQLHEREPDQVLLKAMAFEVDEYEYTFGQEFRFFGNTTIIRWLGDIGLSSLCEYEDGKLGKELGYADVESVNHFLIKPEVVNGRLLWGDGEVIDRKLFIYVLSSDFEFRLVEQVEGRGRCNHSYMNGGLPVVCAGEVAIEKGKVVGINNLSGHYRPSEKSLHVCLEVLRGKGVVSEECCIMHLDEELKHLFFDEYFMQGIKNNDGLKGDPVPASVRGHDNKPREKLIFPRWQLDADSVIKRTLAGRKVS
>NZ_CP029693.1|WP_110967471.1|6422002_6422263_+|hypothetical-protein
MPKPTPNPPESPTENPAISKPATTHTPSTIFAITADIRTEDLLAHACESLASASVMASDGGLTADLISRMSPIPCRSEPARDGRQR
>NZ_CP029693.1|WP_110967470.1|6420170_6421031_+|curli-production-assembly/transport-protein-CsgG
MKKIIALGLMLAALQGCALREPLPAEQDSKIPTLTPRASTYYDLINMPRPKGRLMAVVYGFRDQTGQYKPTPASSFSTSVTQGAASMLMDAMQASGWFVVLEREGLQNLLTERKIIRASQKKPNTPVNIQAELPPLQAANMMLEGGIIAYDTNVKSGGEGARYLGIDISREYRVDQVTVNLRAVDVRSGQVLANVMTSKTIYSVARSAGVFKFIEFKKLLEAEAGYTTNEPAQLCVLSAIEAAVGHLLAQGIERHLWQVAGDTAVSEQNETLDRYLTQNKVTPEEE
>NZ_CP029693.1|WP_110967469.1|6419722_6420139_+|curli-production-assembly-protein-CsgF
MKTKMMFKHAGLCLLGLGACALAQATELVYTPVNPSFGGNPLNGTWLLNNAQAQNDFDDPDLKDRTSATATSALDRFTAQLQSRLLGQLLDNINNGNTGSLSTDAFIVNVVDDSGQLTIEVTDRATGQLSEIKVNGLN
>NZ_CP029693.1|WP_110967468.1|6419336_6419726_+|curli-production-assembly/transport-protein-CsgE
MKRFCLALILVLSAGTAAAAEEDEMLGFIIDDTISHIGHDFYYMFSERLRATSPMDFNLVVRERPSARWGSLVTVEFQQRLVYRRFLPPNTVELKDDAYNAADWVRGQIAQRKLEALLQDTTDLERDEL
>NZ_CP029693.1|WP_110967467.1|6418800_6419340_+|type-II-secretion-system-protein
MAAFIPNGKPASQDGFTYIGVLLLIMVMGMGLASAGELWATAARRDRERQLLWVGTQYAQALRSYYRSSPGLAQYPKELVDLLQDERFPSAKHHLRQLYPDPMGGGEWFLMRGFDGRITGIASSSTDKPLKQVDFPAQWSDFTGMTSYKDWQFVAEKAFSDGASGPVKAQSNAPQALQP
>NZ_CP029693.1|WP_110967466.1|6418451_6418826_+|type-II-secretion-system-protein
MRRQKGFTLLELMVVMAIIATLMTIALPRYFNSLEASKETTLRQSLSAMREALDHYYGDTGRYPDSLDQLVELRYLRNPPMDPIAERKDTWVMVPPPEGVAGGVADIKSGATGRARDGSLYSEW
>NZ_CP029693.1|WP_110967465.1|6417973_6418447_+|type-II-secretion-system-protein
MKASQSGFTLIEVVVTLALIGLLAGMAAPLTETLVRRGKEQDLRTALYQIRDAIDAYKRAFDAGYIEKTLDSSGYPPNLKVLVEGVRDVRSAKGAKFYFLRRIPHDPLATAKRDDDGGWGLRAYDSSADNPRDGQDVFDVYSKARGKGLNGIAYREW
>NZ_CP029693.1|WP_110967464.1|6416114_6417971_+|secretion-type-II-protein
MNKSRLLMSMCLCAGLAACSSAQVAKDEGTTLMESGQYEAGLARIEQGIRENPRDTELHLALTSGRARAVTALLSQGDMARAQRDFATARLTYGRVLKIEAHNRRAQDAIEQLDHMRSLDEKLELARGDLRRGDIYGADRQVKQILELDPNNDGALELQSNIRLVQSRNVVQYPQLRTRLDKPVTLEFRDANLKTIFEVLSQVAGLNFIFDKDLRPDMKATIFVRDVRIEDAVELLLQQNQLHQKVVNENTLLIYPDSPQKLKDYQELVMRTFYLTSIDANTALNMVKTMLKTRDVFVDERLNTLTMRDTADAVRMAEKLLQSQDQSNPEVVLEVEVMEVATQRILDLGLQWPNTFGVVNSDGSAVTLLDQLKGIDSSRITISPSPQAKINAQDNDINTLASPVIRVSNREQARIHIGQRVPIISATSVPSTQGPVITESVTYLDVGLKLEVQPTVHLNNEVAIKVALEVSNATPLEPTRQGTIPVQVDTRNAQTTLRLHDGETQILAGLMRNDHGATGNKIPGLGDIPGLGRLFGSNKDTVGKSELVLSITPRVVRNLPYQSPSDMEFTTGTETSMHIAAPDRSLQSTVQTEHLDRPIATNASVNPNTNVEISVGKP
>NZ_CP029693.1|WP_110967463.1|6415599_6416118_+|hypothetical-protein
MNNKRVVGWVAFLGAAAALTWFSDVFKPAEEAGVEVAAVATPAKATSDGKLPAAKAGAAPAPIKDLSPAGDLFAASSWKPAPTLATVTEQPVNVAPVVQAPTAPPMPFQFIGRIDDRTDLQVFLQNGEKIYVVRKGDVIDATWKIERISDMELSLVYLPLHLSQTLSVGSAQ
>NZ_CP029693.1|WP_110967475.1|6425323_6425785_-|curlin
MKKSTAALLCLLLLCGSAGVRADDLMENDDLAPGADLGELPPPVGQRALIDQNGQANIALVQQNGQSLLGQIVQQGSNQEAYILQQGSDLMAWINQQGSGNAALINQSGSHNRAQISQNGNNNDASIVQAGTGQQSAVTQAGNGMSVSVTQYR
>NZ_CP029693.1|WP_110967476.1|6425844_6428088_-|cadherin-like-domain-containing-protein
MNKWPRFALNALGLSLSISGSAFAQLAAVDTGPYTFATGKFPAWYQDNGLLSLELCQSKAVSTRVAATVPPAYMCILNPEPGIFDDTQPIVFPDNWPPEAFWFLAETNINKNGTYGVDAYVAGVEAAFASENPIDGDQQSFARIRIRVNVPVAGVYTITHPYGVETVNVTTPGRRAINITRDIGIGAPGDFSGALNGEIGPFLRGLTPPYTAVNPETGTVDNFIGDPNVPEAVTGSPLNTNFLRVQGPAGTIETNLFTVSGKILDSRAQTKVDIGRATYRRTSTGPGTSSTRVEVFGSSDASSTLCFRETVALFPGPPASPCAFTMTGSAGQFYGSHLTTGPVPPVVVVTATNPGGTTQPTAVSRKLSDVVKIKTARYSWSNHSLLIEASSSDEVGIPDMVAQGYGRLTKAGTLQSLTVSNLPQPPATVTIKSAAGGSDVEPVTVLGTAPDTGENQAPIARADAGSTSFGVPITLNLLANDTDPDGNNPLTITALTQPPTGQGTVALSGTTAVIYTPPAVVNAPLTTTFTYKAQDAKGLASTTPATVTITVAPNQAPTAVADSVTTLGVAIPINVTANDTDPENNLPLAVASFTQPPAGRGSVTSNGTVLTYTPPASVTTAFTTTFSYFVRDSFGAVSATPATVTVQVSPRPAAETFTVTTATVSARSNNRFTWDFAGTSSVTTGNTITIQVTTPTGLQTLGTTTVPVTGRWRFTANNITNVIPSANPQATITSSQGTVRTVQVIAN
>NZ_CP029693.1|WP_110967477.1|6428123_6429470_-|hypothetical-protein
MHPLLSKTAIALAVTALAQGVAQAALFAVDPGPYAPELGSFASWYQDTHGRTVDLCLSKAVSSRVAGAPGAPAYMCLLNPNPGIFDDTQPIVFPGNFPDEAFWFTGDGAITDAARGIDLTYTSALEAAFSGGDPKEGDQISFARIRIRVDVPTAGTYVITHPYGVDVFDVTTPGRKAINMTRDIGIGSPKTYNGALKGDVGPFLRSVNGPYTETNPVNGQVEQFVGDPNLDEAFTGSPFNTNYIRIEGPGGIDLRTTVMAISGKLSTVARPTPIIAERSTYARKDVNGAPVAQQDVFVMAPPPPATVNLDSNSPPLKLSEADTTGHWYAQSANNPALPSTLQVTADNHLAIPTSSPTTLPMTLTDQVTISTAEYNSSSGQITIVASSSDESSPPVLTATTDTGAVIGALSGSGVDKQIITGISPIPPAKVKVTSSNGGTDIEEVVIVQ
>NZ_CP029693.1|WP_110967478.1|6429793_6431242_+|HAMP-domain-containing-histidine-kinase
MTTLAKALQSDKGDIRLSTRKQPFNLLRWFSLISMAVIGTVAVALGSVSTKFVITESVQRDALLTSQFIQAIASAELRHVAVPNVRTMGELLDPRKDRDYTDVDPMARANARGEFLDHIEHLPDVILANIYAPDRMVIWSTNPALMGTTIHADEDLDKAFANRTPVSASYHDVDKSRMEQKFITPPEYIFIENYIPLFDAEGKNVTAMVEIYKEPKDLINRMERGLVLIWVATALGGALIYFGLYWIVRRAAILLATQQKQLITNETFVALGEMSSAVAHSLRNPLATIRSSAELALEFDGGAAHKNIQDIIGQVDRMSKWVRELLQSLRPLNDEPEAVNLVASLYDSLMAFEHQITKGQIKVVFEPKETPMVLSQQVQLTQILNSLLSNALEAMDDGGMLTIAMSPADAQGVVVVVSDTGKGMSEEQRKMAFRPFFTTKQGGLGVGLVLVKRIMERFGGSVTLDSREGEGTSVRLSFKLVP
>NZ_CP029693.1|WP_110967479.1|6431554_6434356_+|multicopper-oxidase-domain-containing-protein
MDRKARYPFKWFLTPLSVVLSMTISTGMLRAAPIDDERQPEPTDPSAYYDEPADEPAALNAILSMPKANEEAFDLPDGVKGTRNTERVENQLPPAQQTSFNYPTNGKPSPLFGAQPFTQQMMLFEEFGPEKLDPTTPAAQLPFPPPGIGPLPAQDPTSAARSAPPSLALDNFLRQPGLTPFPTQYSNSVDRNPWQAQIEQYLNRHIGSSAEGRPPGKGWSHQRWNEFYPQNAYKTVQTGIRTNGGLRDDKQMHHYAVGEFGPGGLYHNVAGIPATDGTSKGVEPRLHPLMPVQNHNSVWTFDGTLPPKLLMVRYGQPLIMRHYNGLPIDPSANMGFGLHTITTHEHNGHAPAESDGYANAFFFPGQYYDYRWPVQLAGYDSINTKAEDPRAAFPCSPGETLWTNDMSPGLKTCDHGTIKIRGDWRETMSTHWFHDHMLDFTAQNVYKGNAAMMNYYSALDRGNESVNDGVNLRFPSGSALPWGNRDYDVNLLFADKAWDQNGQLWFNPFNTDGFLGDQVVVNWGWKPTLDVRARSYRFRMLNGSVSRYYKFALVREIKGTSGEFQGPKGSGVSYARVPFHMIANDGNIMEHSVPFDGTMDLDGDGDLQNHNAILPTQGIAERFDIVVNFAKNGIKPGDKIFFVNLLAHDDGKGPKEAIPLADVLSEKYLAVIKQTSKGPQWDRGDPAVGKVLQLNVKAYTGQDLSMDPSKYEPAKPGKAEGLVMIPLKIHRDNPADKALLANARHRSFIFGRSDGTDEAPWTVKSDGGFGFNMDPRRLSAATQLKTGPTDAGTTGFGTLEVWKIQLGGKGWSHPVHVHFEEGIILSRGGKAPPEWEKWARKDVYRIGSENDGLDNVEMAINFREFAGTYMEHCHNTQHEDNSMLLRWDIEHPGQFQLMPTPLPSWDGVRYVNSAALPTFRTGDGSGPTVTVKQ
>NZ_CP029693.1|WP_110967480.1|6434352_6435513_+|c-type-cytochrome
MKREGVDMKLHTPRTRALGMHLILVLVTGLLASQLLVAKQAPSAPAPTSTEAIATATKPAEQPAATESATPWGGDYFPNTLLTDQNGRQVHFFDDLIKGKVVVINFIFTSCSDSCPLETARLRQVQKLLGDRVGKDVFFYSISIDPLSDTPEVLKAYSQRFQVGPGWLFLTGEFADVTELRKKLGLFIEGVDNGRSKDHNLSLIVGNQETGRWMKASPFENPWILADQLANTLQNWKQPSIEQSYANAPEIRPPSNGEELFRTRCASCHSLGPMDGQGIGLRSIGPDLIGVTLQREPAWLNRWIREPDRMLAEKDPIAMELFDRFNKIPMPNLRMDEKSAQSIIEFLQEETDRQHPKAPLTAENEEPEHHHAIAAPGGQQMPAQMQ
>NZ_CP029693.1|WP_110967481.1|6435615_6437109_+|two-component-sensor-histidine-kinase
MQILEEQKLPAPTTPATQTRDWRPPFNLVRWFSLASFFIIAAVALGLGYISTRFVVEESIERDSMLTAQFIQAIGDAEIRHASITPTRTMGEMLDPRLDNSYPDVEPGARANARVEFLDHVEHLPDLLLANVYALDRTVVWSTNPELIGMRIDDDDELDESFEMKEPVSTSYHEIDEERPEQRLMREPQYLFIENYIPMFNADRSKVIAMVEIYKEPTDLVERIQRGFKAIWLATLLGGAAIYLGLFWIVRRAAMLLQSQQKQLVANETFVALGEMSSAVAHSLRNPLANIRTSAELAQEIASHGAQKNIGDIISQVDRMSRWVRELLVSLRPVNDDFDEVDLVLTIDDTLGAFEALIKRSNVEVRFTPKSVPPVVSQQVLLTQILNSLFANALEAMPTGGVLSIEIETPAPDRVSMILTDTGKGMTKQQQQMVFKPFFTTKQGGLGVGLALVKRIMERFDGSVQLTSQEREGTRVCLNFKVATGGEYGTQHTAGRG
>NZ_CP029693.1|WP_110967482.1|6437077_6438508_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MEHSILLVEDDELLAENIQTYLERKDFEVTVCHSAENALEQLKTFVPDVVLTDNSLPGMSGHDLIQKLRISAPDLKVIMMTGYGNVEDAVVAMKEGAFHYVTKPVALPELKVLLDKALATDRMERTLSFYQEREAQKAGVQALIGESAPMVYLKSTITQLLDAERRMANTDLPPVLVEGETGTGKELVARALHFDGPRAKGPFIEFNCASIPANLVEAELFGHEKGAFTDAKDRRLGLVEAADGGTLFLDEVGEMDLILQAKLLKLLEDRSIRRVGSVKERKVDLRVISATNCNLEQMVQQGKFRRDLFFRLRIISIKVPRLYARGEDILLLARHFLAAHGKRYGKPHLRFSEQAEELLLNYSWPGNVRELRNMLEQTVLLAQNDVIAAHQLNVCMSLVDEPPMFQHEVPAAEPRSAYNDTESMNLPEVERDMVRKMLDKTDWNVTKSARLLGLSRDMLRYRIEKLGLARPDKRQW
>NZ_CP029693.1|WP_110967483.1|6438607_6438994_-|hypothetical-protein
MKKIEQTLMLALCLTAATWVQADDSLMQTEQSSSEFNYYGADQPFAHPAPPSLSTIPPGAYIPTSPQTFTPVSSEHVFSDSQLPTVADATVRVFIRTYDEERGVYVNQEVENPECTLSCLRGQQIPTL
>NZ_CP029693.1|WP_110967484.1|6439259_6440063_+|class-I-SAM-dependent-methyltransferase
MELPTKQQAIASNRDAWNDSARHHKDNPDWQVLLSAVAHEDFSCLDDTLTGLLTEVGVDGKEMVQLGCNNGRESLSLFALGARDVVGVDQSVAFLDQARELASRSPHRPEFIEADIHHLPSTLQGRFDLALITIGVLGWMPDIGEFFRHVAQVLKPGGTLVVYETHPFLEMFDPEAADPYALASSYFRREPFVQTEPIVYEGKVRQQAAPSYWYVHNLGDLFGSAIAAGLNIRHFKEYPHSNREELYDRYERREAQLPMCFTLVAQR

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Crispr_ID: NZ_CP029693_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029693_3

6496114-6496218

Orphan

Consensus_repeat	Method
CTGATTCACCTCAATCCAACTGTGGGAGCTGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029693_3

>merge|NZ_CP029693|3|6496114-6496218|CRISPRCasFinder
CTGATTCACCTCAATCCAACTGTGGGAGCTGGCCTGCCAGCGAAAGCGGCCTGACAGCCGACCAATGTCTTCCTGATTCACCTCAATCCAATTGTGGGAGCTGGC

>NZ_CP029693|3|3|6496114-6496218|CRISPRCasFinder
CTGATTCACCTCAATCCAACTGTGGGAGCTGGC	CTGCCAGCGAAAGCGGCCTGACAGCCGACCAATGTCTTC
CTGATTCACCTCAATCCAATTGTGGGAGCTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029693.1\|WP_110967546.1\|6507528_6509181_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP029693.1\|WP_110967532.1\|6487830_6489798_+\|DNA-ligase-D	unknown	unknown	gnl\|CDD\|235658
NZ_CP029693.1\|WP_110968016.1\|6485862_6486585_-\|phosphatidylcholine/phosphatidylserine-synthase	unknown	unknown	gnl\|CDD\|224104
NZ_CP029693.1\|WP_110967537.1\|6493183_6493585_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|140294
NZ_CP029693.1\|WP_110967536.1\|6492644_6493184_-\|phosphohydrolase	unknown	unknown	unknown
NZ_CP029693.1\|WP_110967543.1\|6502764_6504174_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|179902
NZ_CP029693.1\|WP_110967531.1\|6486848_6487607_+\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|377342
NZ_CP029693.1\|WP_110967542.1\|6501313_6502759_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143427
NZ_CP029693.1\|WP_110967541.1\|6498931_6499849_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP029693.1\|WP_110967545.1\|6505509_6505881_+\|ethanolamine-utilization-protein-EutQ	unknown	unknown	gnl\|CDD\|227107
NZ_CP029693.1\|WP_110967534.1\|6490637_6491906_-\|transporter	unknown	unknown	gnl\|CDD\|367457
NZ_CP029693.1\|WP_110967540.1\|6498106_6498754_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029693.1\|WP_110968017.1\|6497005_6497422_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP029693.1\|WP_110967538.1\|6493747_6495157_-\|putrescine-ornithine-antiporter	unknown	unknown	gnl\|CDD\|182622
NZ_CP029693.1\|WP_110968018.1\|6500138_6501302_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|226985
NZ_CP029693.1\|WP_110967535.1\|6492129_6492408_-\|DUF3303-family-protein	unknown	unknown	gnl\|CDD\|378707
NZ_CP029693.1\|WP_110968019.1\|6505962_6507183_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP029693.1\|WP_110967533.1\|6489918_6490593_-\|DUF3313-domain-containing-protein	unknown	unknown	gnl\|CDD\|378712
NZ_CP029693.1\|WP_110967544.1\|6504184_6505513_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP029693.1\|WP_110967539.1\|6495342_6495672_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP029693.1\|WP_110967546.1\|6507528_6509181_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NZ_CP029693.1\|WP_110967532.1\|6487830_6489798_+\|DNA-ligase-D	gnl\|CDD\|235658	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed.	0
NZ_CP029693.1\|WP_110968016.1\|6485862_6486585_-\|phosphatidylcholine/phosphatidylserine-synthase	gnl\|CDD\|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	2.69023e-37
NZ_CP029693.1\|WP_110967537.1\|6493183_6493585_-\|hypothetical-protein	gnl\|CDD\|140294	PTZ00268, PTZ00268, glycosylphosphatidylinositol-specific phospholipase C; Provisional.	2.79043e-05
NZ_CP029693.1\|WP_110967541.1\|6498931_6499849_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	1.01849e-83
NZ_CP029693.1\|WP_110967542.1\|6501313_6502759_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143427	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.	0
NZ_CP029693.1\|WP_110967531.1\|6486848_6487607_+\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	6.28109e-52
NZ_CP029693.1\|WP_110967545.1\|6505509_6505881_+\|ethanolamine-utilization-protein-EutQ	gnl\|CDD\|227107	COG4766, EutQ, Ethanolamine utilization protein [Amino acid transport and metabolism].	1.93029e-16
NZ_CP029693.1\|WP_110967534.1\|6490637_6491906_-\|transporter	gnl\|CDD\|367457	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX). This family includes TodX from Pseudomonas putida F1 and TbuX from Ralstonia pickettii PKO1. These are membrane proteins of uncertain function that are involved in toluene catabolism. Related proteins involved in the degradation of similar aromatic hydrocarbons are also in this family, such as CymD. This family also includes FadL involved in translocation of long-chain fatty acids across the outer membrane. It is also a receptor for the bacteriophage T2.	1.23891e-71
NZ_CP029693.1\|WP_110967543.1\|6502764_6504174_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|179902	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW.	2.61397e-107
NZ_CP029693.1\|WP_110968017.1\|6497005_6497422_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	4.73169e-67
NZ_CP029693.1\|WP_110967538.1\|6493747_6495157_-\|putrescine-ornithine-antiporter	gnl\|CDD\|182622	PRK10655, potE, putrescine transporter; Provisional.	0
NZ_CP029693.1\|WP_110968018.1\|6500138_6501302_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	7.79668e-46
NZ_CP029693.1\|WP_110967535.1\|6492129_6492408_-\|DUF3303-family-protein	gnl\|CDD\|378707	pfam11746, DUF3303, Protein of unknown function (DUF3303). Several members are annotated as being LysM domain-like proteins, but these did not match any LysM domains reported in the literature.	3.77553e-21
NZ_CP029693.1\|WP_110968019.1\|6505962_6507183_+\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.32376e-74
NZ_CP029693.1\|WP_110967533.1\|6489918_6490593_-\|DUF3313-domain-containing-protein	gnl\|CDD\|378712	pfam11769, DUF3313, Protein of unknown function (DUF3313). This a bacterial family of proteins which are annotated as putative lipoproteins.	6.80807e-56
NZ_CP029693.1\|WP_110967544.1\|6504184_6505513_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	9.17751e-42

>NZ_CP029693.1|WP_110967539.1|6495342_6495672_+|hypothetical-protein
MRNIWIALISVGVAGLAVSAQARELKDSDRYMCSWGAGTAARAQELKLSGVSLYAARQKIQAYKFSKPWMRMTAMGITEQTYDSPTRIKPAAVRASFYEDCVRYKLARR
>NZ_CP029693.1|WP_110967538.1|6493747_6495157_-|putrescine-ornithine-antiporter
MSVAKKMSVAQLTLLTAVNMLGSGIVMLPSKLAEVGGVSILSWLVTATGSLALAYAFARCGMLSRKTGGMGGYAEYTFGKAGNYLTNYTYGLSLLIANVAISITAVGYIQELFDIHLNSLQVGLATIALLWITTFANFGGARITGRISAVTVWGVIAPVVLVSTVGWFWFDSSVYAAGWNPHDKGWFEAANASVAITLWAFLGLESACANTDAVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVDNPALAASTAPFGLVFAKMFTPLVGDIVMGLMVLACIGSLLGWQFTIAQVYKSSADTGYFLAIYARVNKSGTPIIGMLVLLAAQTALALLTISPNLSKQFDILVNLAVVTNLVPYILCMASLMTLQKVSNVPAGKALVTNIVAWVAAAYSYLALYSSGEQALMLGGVATILGFTVFGFVNNRLIRLEALNNSVPTQTVAAQHMTGEPVPVYRLKKVKPRIQP
>NZ_CP029693.1|WP_110967537.1|6493183_6493585_-|hypothetical-protein
MTTSAPIRQPCPPGACDCGRDPLLETPGADVRILFLTRNEEKRLIERLENLSSYNDLQHLQRRMFDQLGIRVDIAPGVNEVRTMRGINIQVGDLPGLCRKTRASIPAAIRRAMEKCPEIAYDVLNANDLLRDA
>NZ_CP029693.1|WP_110967536.1|6492644_6493184_-|phosphohydrolase
MDPILEFPVTDEILTSFALAVGADLPGYRNHIYRMLNFHCALRGLQGPPGEAVQIAAGFHDLGIWTDNTLDYLPPSVRLANDYLDNRYRGDFAEEVSALILEHHKVRAYRSAHAETVEPFRQADLIDVSLGLVRFGLPRSFIKTVQSTFPDHGFHWMLIRLSTRQLLRTPLRPLPMFRW
>NZ_CP029693.1|WP_110967535.1|6492129_6492408_-|DUF3303-family-protein
MLFIVNWTLSPENRNSAIERFLKTGGAPPAGVNLIGRWYAVGGAAGFGIAEASDPTLIQKWVLEWTDLMKMEVQVALTDEQMAPLLAGIVGK
>NZ_CP029693.1|WP_110967534.1|6490637_6491906_-|transporter
MPTKTATLPAITLLALCSQQAYAGGIMLYEIGTDNVGLANAGAAARAQGPSTIASNPAGMSYLPGTQITAGLQVLYGDISFDRDSGTNVSGTNSGNALDPMPGASFFVSHELDDHWSVGFGQYGDFGLAVNYDNDWSGRYFAQNSSLLGLSMVPSVAYRFNDEWSVGIGVKAMYGMLQAQTAIDRSPFGLTDRGDGQFKYKDKDWGFGANVGVIYAPQPGTRIGLAYTSKVDFEFEDGLDIKGNGPLLNRLDGAKTQLDITVPQTLTLSLFQQLDPKWALLASAGWQDWSEFGDIGIEVDTSANDARSTNIDAGFKDTWHLSLGAQFQYSKQLLWNVGMAYDSSAVSDSNRSVIVPMAESWRVATGATYALNKDTDINVSWAMIWMGDMPVDQSKNLSGDRISGQFDNAWIQTITGNMTWRF
>NZ_CP029693.1|WP_110967533.1|6489918_6490593_-|DUF3313-domain-containing-protein
MNLSRKLLVGAALTGLLLGGCTSKVTEREQYSGYLSNYNNLQEVETPSGGTAMRWVAPSWNPNAYDTVAFNKLELYPAPKPNERVNQQTLNDIQNYMTNRAKTTLGQKYRVVSSPSAAPAGAKTLIMKAAITGVSASNEGMKWYEVVPIAAVVGATQAATGHRDQDTELFIEAEFIDAKSNQTVAKVVRKVFGKQLSNESQKVTAQDFKAAIDKLNSDFQAFIK
>NZ_CP029693.1|WP_110967532.1|6487830_6489798_+|DNA-ligase-D
MNKAIKPPATPAPQKKSAQLTGAHKAKLPDQLKPELATLVERAPDGHWSYEVKFDGYRIMARIDRDDVSLFTRNGHDWTHKLPEQAKALAELGLESAWLDGEMVVTNEQGVPDFQALQNAFEANRSGHILYYLFDLPYLNGVDLREVPVEERRAALATVLKAHDDPLLRFSDSFEEDPQALLNSACQMRMEGLIGKRLGSPYVSRRSGDWIKLKCKHRQEFVIVGFTEPKGSRSAFGALLLGLHDRASGELRYAGKVGTGFTEATLASIHGQLKPLQTKKPALVDPPAGAEFKTVHWLKPRLLAEVAFAEMTKDGSVRHAVFHGLRDDKPARKITEERTSTVKTPSAKKKVDPAPSQVGLEEGKVRITHPERVIDASSGTTKMQLAEYCASVAEWILPQLKDRPVALVRAPDGIAGELFFQKNAEHLAIPGIVTLDQALTGQPMMVINNAEALVGAVQMSTVELHTWNATSDNLDKPDRFVLDLDPDPALPWKRMVEATQLTLTVLDELGLKAFLKTSGGKGIHLVVPLTRKLGWDEVKDFSHGIVSHMAKLLPERFSAVSGPKNRVGRIFIDYLRNGLGATTICAYAARTREGLPVSVPIFREEVGELKGGNQWTIHNVHERLAQVGDEPWKEMKKTRQSITAEMRRRISMKKT
>NZ_CP029693.1|WP_110967531.1|6486848_6487607_+|tellurite-resistance-TerB-family-protein
MNTSDLLEQLLRGGQGAMSQQGGAGAQGGLGDLGGLLGGLLGGGGGGGGAGMGGGMGGGLGGLGGLLGGLLGGGSPMGGAPQGRSGGGANYAALASLGMMAFQAYQSWQRSQAMQQQQAPQQAMRTVDMLAGPEIEEHSHAILRALIAAAKADGRFDDAEKQMINAEIARHTNDPQLQQWLDDEVAKPLDAGEVAQSASDPGMAAEMYLASVMLVDDQQDAERNYLDELAAALGIDPDLQVHLEQQAKGGAA
>NZ_CP029693.1|WP_110968016.1|6485862_6486585_-|phosphatidylcholine/phosphatidylserine-synthase
MITTLHIARLKAWGAHGFTATGVVTAFLATLALLDNQPTHCLLWLGVALIVDGLDGALARKVNVQSVLPSFDGSILDLVIDYLTYVFIPALFIYRYVPLPDYTLLLSVSLILVSSLFCFCNVNMKSKDNYFQGFPAAWNVVALCLYIIAPSPWITLLTIIGLALLTLTRMKFLHPFRVRRFMPINIAVTAIWLLCSLSLVINHPVINPLVMGLWLLMSAYFLGICFWRTALEWFDGSRHP
>NZ_CP029693.1|WP_110968017.1|6497005_6497422_+|organic-hydroperoxide-resistance-protein
MTQLDKVLYTAKTHTTGGRDGASRSSDGILDIKLSSPGAGGGGTNPEQLFAAGWSACFIGAMGVAAKEMKVALPKDVAVDTEVDLGTNEGGYLLQARLNVSLPGLDRETAQKLVDTGHKYCPYSKATRNNINVVVKLA
>NZ_CP029693.1|WP_110967540.1|6498106_6498754_+|hypothetical-protein
MAINTIMSLIEHKEFMEFLRLGVVYVHLVACCVAIGLVLTSDIAMVRDMLKRKALTGHDHTHMESLQRSVVWALIALWVTGAAIIGIDYLDKGMQYFSNPKLQAKVIIVMMLTYNGVLLHRLVLPALQKAGSLLDLGFSARMMALFCGSLSAVSWMYAAMLGVGRPLAWKYSLSELLMAYPALIVLGFVTMLVLTQHAKRKPADVAPQWVNAVAH
>NZ_CP029693.1|WP_110967541.1|6498931_6499849_+|LysR-family-transcriptional-regulator
MKIHPLPPLNSLVAFEAAARHLSFTLAAQELNVTQGAISRQVRLLEDYLGKVLFERTTRTIQLSPAASRYYETVRASLLQVAQATGEIRHWQGAEQVTVATSTAMASLWLLPKVSEFQRENEEIDLRIIAHDQVKDFSRLDCDLALYYCSTPPRDMQVTPLFSEEVYPVCSPAYLAKHPTLSQPQDLAACTWLVLDDPQRDWLGWADWLHSQGLKNVEPKRRININSYSMVIQSALNGQGVALAWSNLVEDYLQSGALVRPLEATLRTDAQFCLLEPLTRGGMRQSVKRFRSWLMNQLPTPPANK
>NZ_CP029693.1|WP_110968018.1|6500138_6501302_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MQNLETVLNPIHEATGLGNEFYTEQRYFELERDQVLGKTWACVGFASDLAKAGSVKPVDFMGLPLLLMRNREGVVQVFHNVCSHRGMKLVEEAGEVQGVIRCPYHSWTYDLNGGLRGTPHVGGIDQHKDERFACEKHGLKAIRSAIWMDMVFINLSGEAQPLEEMLAPLTARWSQFLGEDGMSLLSRRPGHDATVLDINCNWKLAVENYCEAYHLPWVHPSLNSYSRLEDHYNIIVGEHFSGQGSYAYNLSDVAGTHLPKFPAWPLDRLRNAEYVAFFPNVLLGIQADHAFAMQLEPVSPGRTIEHLRLFYVGDEAASSEEFSACRDAILESWKVVFAEDISSVEGMQKGRYSPGYKGGAFSPEMDIPTHFFHQWAARQLLATTEKA
>NZ_CP029693.1|WP_110967542.1|6501313_6502759_+|aldehyde-dehydrogenase-family-protein
MYPIASHWLNYIDGQWVDSTQRLTVNNPGTAEPLATIAQATVADAEHALQAARRCADSGELTRARPAQRVTWLLRIAEEIRAVADEGAWVLCQENGKRLSDAKDEFTEAARYFEYYAGMADKIEGTSIPLGNGYMDFTLYDPMGVSAQIVPWNFPVSICARSLAPALAAGNAVVIKSPELSPLGMCVLIRAIAKAGLPDGAVNLICGRGREVGSHLVSHRGVDQIVFTGSVPTGQSILRDAAQYAIPSVMELGGKSAAIAFADADREQLLASVKSGIFFNAGQVCSAMSRLLVQREIYDEVVEAVVAMAEGLSVGLGQDNADLTPVVSAGQLSGIEALCRRAIEDGAVAVTGGEAFADRAGHFMRPTVFRDVTPDMCIAQEEVFGPVLAILPFDTEEEAIAIANGTDFGLVAGVFTQDISRAMRCTRRLKSGQVFVNEWYAGGIETPFGGVGLSGFGREKGQEALFSYVRTKNVAIRVAGE
>NZ_CP029693.1|WP_110967543.1|6502764_6504174_+|FAD-dependent-oxidoreductase
MFKTWLCIVCGLIYDEALGWPEDGILAGTRWEDVPEDWICPECHVGKADFEMLDISEYTEAAVAVSAPITAPPPAVAVPVVAALPRGPIVIIGSGYAGLGLAQALRKADPKVEIRVLTQESGYLYSKPALSIGLSQGKTAEAMSGESPLAIEQRLNIRIYAHCTVQAIDSSARRLRTSFGDMEYGQLVIASGAQPIRLPIRGEAQAMVSVNNLQDYHQFRERLTGVKRVAILGDGLIGCEFANDLAHNGFEVDVIGLGRWPMERLLPAEAGEVLQGALSDLGVKWHLQNTVDAIESSGQGYVLTLAGGQPLKADLVLSAVGLRPDLSLAQTAGLAVGRGIQVNAQLQTSAPGIYALGDCIEIDGQLLPYLAPINQGIQALSKTLLGQATAVEYPLMPVTVKTPAAPLCLLAPAAGSEGQWRCTATTDGMSASFHDTEGRLNGFVLLGRQAQTQRSALLQSCQNTQQAVA
>NZ_CP029693.1|WP_110967544.1|6504184_6505513_+|FAD-binding-oxidoreductase
MKNSINLPFDDATCGWYAALPEQPACKRLSGEQRADFAVVGAGFAGLAAARRLAQHHPEARIILVDAQRVAHGASGRNSGFVIDLPHKFALEHPDPAHKQRLLSLNRSAIAQLQGLVQKHDIDCQWSHAGKYQGAVGPRGMAYLDHFEKLMTDLGEPFRRVGTTELAGVLGTRHYSGAIYTPGCYLMQPAALVTGLARSLPDNVELLEESPIQRLERDGRGGWILQGTNGVIRTPQLLLGTSIFTQEFGYLRNRLLPVMTFASWTRPLTDAELATYGGQLDWGLTPADHAGTTVRMTQDRRLIIRNTYKHVPKYGRSTSDGMREKIRESHRKAFKARFPQLADVPFTHTWGGVYAISRNFTNFFGELEPGVHASACDNGVGAAWGTISGTLLADMAVGAQSAQLNDIRAVTGMPSLNPPEPFLGLGVRSRIHLAAWNSRSEL
>NZ_CP029693.1|WP_110967545.1|6505509_6505881_+|ethanolamine-utilization-protein-EutQ
MSSPGKAKGRVLRVDHKDLDFTFRGGPPGAAFVARALSNEISPNIGVGFARWEGAQVAWTVLYDEVIFVIEGCFQLHVGDELFEVTPGQLLWIPEGTELVYGGHALFGYVVHPGNWKELHGLS
>NZ_CP029693.1|WP_110968019.1|6505962_6507183_+|MFS-transporter
MTKTFGALYLASLMMQLGSMLLMTWLALRLNVLGASETAGGALMAANALGMVLGGWVGRSLIAQVGHIRTFAACAGIIASAVLAHEFSTALPFWLVLRALVGLAMMCQLMVLESWLNDRAQTEQRGRVLSLYMVASYVGMMLGNLALSLDEGLGIRVLLGVAMVFALGSVPVALTRSMHPTAVPAASIDLRLFLRRIPQSLVTILVSGMLNGSFYGLAAIYASKQGLPTAQVGQFMALSIAAGLLAQLPLGWLSDRLPRASLIRAVALLLIVISLPLALNQQPSFATLLLFGAGVGFLQFCLYPLGVALANDNMEPALRVSLSGMLLITFGVGACFGPLIAGALMEHLGAPSFYYFYAGSALLLALCVGQAKVTGEHLQKDAPLQHPVTPNGIASSNLVSITEPGD
>NZ_CP029693.1|WP_110967546.1|6507528_6509181_+|BCCT-family-transporter
MRAQSGMLKGLNPNVTVASIIGVIIFVLFCAFKDEQAAKAFEMASAFILHNFKWYYLALISGVLGLLLYISISRFGNLKLGGEHDRPEFSFASWIAMLFSAGMGIGLIFWSVAEPMLHYADNPFSKGLTDESATLAMRITLFHWGLHPWAIFSMIGLSLAYFAYRKGLPLALRSLLYPLIGDRIYGWIGHVVDIMGVIITAFGVSQSLGLGVVQINTGLHNVFGVPISIALQLSIILFVSVVACISLVAGLSKGMKRISTLNMYLSFILMFAVLALGPTRYILNLMFESTGDYVQNIVGLSFWMDTQKDTEWQNWWTAFYWPWWMTWGPFVGLFIARISKGRTIRELVIGALVVPTMVTILWMSVFGGAALKHEQQDRQAYQASVATQTVAAGVEQPKFEGGTVLLATKKETTAAMFTLLQTLDGQSIGAALSILVCVLLGVHFVTTADAGTQVLCTLCALGSTNPPNWIRLLWCILEGAIAAGLLLAGGLKAIQMASIAAGLPIAMLLLVMSYTLLHSLRREMPSVPAWTPAPDVLPELAQRREPAVAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

803690 : 849924

Salmonella_phage(22.22%)

transposase,integrase

attL 810113:810128|attR 853061:853076

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110962867.1\|803690_804638_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_110962868.1\|804816_805851_+	DNA-binding protein	NA	NA	NA	NA
WP_162634844.1\|807250_807754_+	hypothetical protein	NA	NA	NA	NA
WP_110962869.1\|809263_809656_+	hypothetical protein	NA	NA	NA	NA
WP_162634846.1\|809685_810096_+	DNA binding protein	NA	NA	NA	NA
810113:810128	attL	NA	NA	NA	NA
WP_064490829.1\|810743_813761_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	2.1e-75	25.7
WP_028622770.1\|813757_814147_+	hypothetical protein	NA	NA	NA	NA
WP_144000652.1\|814362_814569_+	hypothetical protein	NA	NA	NA	NA
WP_028622768.1\|814791_815541_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_033050640.1\|815552_815987_-	hypothetical protein	NA	NA	NA	NA
WP_028622766.1\|816173_816512_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_028622765.1\|816508_816940_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_028622764.1\|816949_817375_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_000480968.1\|818490_819327_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|819326_820130_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000904906.1\|820195_820810_-	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-37	48.6
WP_001138082.1\|820935_823821_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.1e-190	39.9
WP_082228621.1\|824250_824577_-	DUF3391 domain-containing protein	NA	NA	NA	NA
WP_001054412.1\|824694_825075_-	hypothetical protein	NA	NA	NA	NA
WP_000091614.1\|825071_825398_-	hypothetical protein	NA	NA	NA	NA
WP_001172026.1\|825770_826106_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_003151133.1\|826086_826464_-	hypothetical protein	NA	NA	NA	NA
WP_010465829.1\|826655_827258_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.6e-40	50.3
WP_024015041.1\|827241_830271_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_110962870.1\|830239_831967_+	toprim domain-containing protein	H9C0J7	Bdellovibrio_phage	3.9e-26	33.2
WP_003830786.1\|832181_833693_+	MFS transporter	NA	NA	NA	NA
WP_008786762.1\|833703_834270_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003150544.1\|834543_835473_-	recombinase family protein	E5FFF9	Burkholderia_phage	1.9e-40	46.9
WP_003089107.1\|835674_835914_+	hypothetical protein	NA	NA	NA	NA
WP_003150546.1\|835913_836324_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_110962871.1\|836327_839321_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	7.5e-259	47.6
WP_003089113.1\|839333_839546_-	hypothetical protein	NA	NA	NA	NA
WP_003150552.1\|839553_839829_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_003089115.1\|839841_840192_-	mercury transporter MerT	NA	NA	NA	NA
WP_003089120.1\|840266_840665_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003465000.1\|842296_842845_-	cytochrome P460 family protein	NA	NA	NA	NA
WP_032437899.1\|842872_843406_-	alkylhydroperoxidase	NA	NA	NA	NA
WP_003464996.1\|843523_844366_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004574805.1\|845230_845797_-	OsmC family protein	NA	NA	NA	NA
WP_004574804.1\|845811_846588_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	2.0e-14	28.2
WP_004574803.1\|846647_847232_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_004574802.1\|847228_847909_-	cupin	NA	NA	NA	NA
WP_028622757.1\|848952_849924_-\|integrase	site-specific integrase	NA	NA	NA	NA
853061:853076	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1251074 : 1310644

Pseudomonas_phage(30.23%)

head,holin,terminase,integrase,portal,plate,tail,lysis,capsid

attL 1272048:1272106|attR 1310737:1310795

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110963159.1\|1251074_1252007_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_110963160.1\|1252185_1253181_+	DNA-binding protein	NA	NA	NA	NA
WP_110963161.1\|1253289_1254648_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	7.5e-49	28.5
WP_095194738.1\|1254780_1255620_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	7.3e-63	46.1
WP_110963162.1\|1255890_1256079_+	hypothetical protein	NA	NA	NA	NA
WP_110963163.1\|1256214_1256496_+	hypothetical protein	NA	NA	NA	NA
WP_110963164.1\|1256507_1256738_-	hypothetical protein	NA	NA	NA	NA
WP_110963165.1\|1256811_1257168_-	hypothetical protein	NA	NA	NA	NA
WP_039768744.1\|1257369_1257672_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_110963166.1\|1257974_1258679_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_110967851.1\|1258681_1259350_+	DNA oxidative demethylase AlkB	NA	NA	NA	NA
WP_110963167.1\|1259422_1260490_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.7e-19	55.7
WP_110963168.1\|1260667_1263097_+	autotransporter	NA	NA	NA	NA
WP_110963169.1\|1263201_1264266_+	nitronate monooxygenase	NA	NA	NA	NA
WP_110963170.1\|1264415_1265183_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_110963171.1\|1265183_1265864_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_110963172.1\|1265867_1266947_+	molybdenum ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-24	32.7
WP_110963173.1\|1267022_1268042_+	DNA topoisomerase IB	A0A0U2TSJ7	Niemeyer_virus	2.4e-44	35.3
WP_110963174.1\|1268114_1268336_+	hypothetical protein	NA	NA	NA	NA
WP_034147138.1\|1268463_1268694_+	hypothetical protein	NA	NA	NA	NA
WP_110963175.1\|1268913_1269198_+	hypothetical protein	NA	NA	NA	NA
WP_110963176.1\|1269266_1269911_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_110963177.1\|1270089_1270926_+	NAD(P)H-binding protein	NA	NA	NA	NA
WP_110963178.1\|1271028_1271229_+	hypothetical protein	NA	NA	NA	NA
WP_110967852.1\|1271644_1271929_+	hypothetical protein	NA	NA	NA	NA
1272048:1272106	attL	NA	NA	NA	NA
WP_110963179.1\|1272311_1273166_-	trypsin-like peptidase domain-containing protein	A0A2H4JE36	uncultured_Caudovirales_phage	6.6e-27	34.6
WP_110963180.1\|1273375_1274110_-	hypothetical protein	NA	NA	NA	NA
WP_110963181.1\|1274140_1274935_-	DNA adenine methylase	C7BGE1	Burkholderia_phage	7.9e-99	66.0
WP_110963182.1\|1275206_1275551_+	hypothetical protein	NA	NA	NA	NA
WP_110963183.1\|1275589_1276159_+	hypothetical protein	NA	NA	NA	NA
WP_110967853.1\|1276170_1276680_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	3.5e-44	60.9
WP_110963184.1\|1276679_1277213_-	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	2.5e-72	75.0
WP_110963185.1\|1277268_1277943_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_162634873.1\|1278019_1278592_-	hypothetical protein	NA	NA	NA	NA
WP_162634875.1\|1278627_1278789_-	hypothetical protein	NA	NA	NA	NA
WP_110963187.1\|1280981_1282019_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	5.2e-135	71.0
WP_110963188.1\|1282008_1282407_-	hypothetical protein	B5TK74	Pseudomonas_phage	3.6e-44	65.2
WP_110963189.1\|1282409_1282916_-\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	1.7e-59	69.7
WP_110963190.1\|1282912_1284028_-\|plate	baseplate protein	B5TK72	Pseudomonas_phage	4.2e-122	63.1
WP_110963191.1\|1284030_1285305_-	hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	4.1e-105	46.5
WP_110963192.1\|1285301_1287365_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	6.3e-116	49.9
WP_110963193.1\|1287364_1287550_-	hypothetical protein	NA	NA	NA	NA
WP_110963194.1\|1287495_1287792_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	2.6e-39	84.7
WP_110963195.1\|1287788_1288136_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	1.5e-41	68.7
WP_110963196.1\|1288196_1289693_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	1.8e-229	80.5
WP_110963197.1\|1289692_1289899_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	3.0e-10	60.4
WP_110963198.1\|1289895_1290486_-	hypothetical protein	B5TK65	Pseudomonas_phage	3.0e-55	53.1
WP_110963199.1\|1290508_1291030_-	hypothetical protein	NA	NA	NA	NA
WP_110963200.1\|1291022_1291385_-\|head	phage head closure protein	Q8HAC9	Salmonella_phage	9.6e-20	46.7
WP_110963201.1\|1291387_1291939_-	hypothetical protein	NA	NA	NA	NA
WP_110963202.1\|1291942_1292248_-	hypothetical protein	NA	NA	NA	NA
WP_110963203.1\|1292298_1293609_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.6e-128	57.3
WP_110963204.1\|1293670_1294615_-	S49 family peptidase	A4JX00	Burkholderia_virus	6.3e-95	57.2
WP_110963205.1\|1294611_1295883_-\|portal	phage portal protein	Q8W6U7	Burkholderia_virus	1.6e-141	60.2
WP_110963206.1\|1295885_1296071_-	hypothetical protein	Q8W6U8	Burkholderia_virus	9.9e-05	56.5
WP_110963207.1\|1296067_1297885_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	3.7e-112	38.7
WP_110963208.1\|1297847_1298381_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_110967854.1\|1298532_1298892_-	HNH endonuclease	A0A2I6PIG1	Escherichia_phage	3.1e-26	52.3
WP_110963209.1\|1298900_1299191_-\|holin	phage holin family protein	Q9MC42	Pseudomonas_phage	2.6e-07	38.6
WP_110963210.1\|1299183_1299537_-	hypothetical protein	V9IQG9	Stenotrophomonas_phage	3.5e-06	37.5
WP_110963211.1\|1299724_1300207_-	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	1.9e-39	56.2
WP_110963212.1\|1300544_1303247_-	DNA primase	A0A2H4JF22	uncultured_Caudovirales_phage	0.0e+00	78.0
WP_110963213.1\|1303243_1303447_-	transcriptional regulator	A0A2H4JDJ0	uncultured_Caudovirales_phage	5.2e-15	60.6
WP_110963214.1\|1303439_1303928_-	hypothetical protein	A0A2H4JFM0	uncultured_Caudovirales_phage	2.9e-35	59.4
WP_110967855.1\|1304065_1304320_-	transcriptional regulator	A0A2H4JA29	uncultured_Caudovirales_phage	1.4e-17	64.9
WP_110967856.1\|1304518_1305187_+	helix-turn-helix transcriptional regulator	A0A2H4J8A8	uncultured_Caudovirales_phage	3.2e-61	57.0
WP_110963215.1\|1305321_1305522_+	hypothetical protein	A0A2H4JG20	uncultured_Caudovirales_phage	1.9e-09	54.5
WP_110963216.1\|1305518_1305827_+	hypothetical protein	NA	NA	NA	NA
WP_110963217.1\|1305823_1306396_+	deoxynucleotide monophosphate kinase	A0A2H4J8A1	uncultured_Caudovirales_phage	9.4e-62	58.7
WP_110963218.1\|1306406_1306682_+	hypothetical protein	A0A2H4JBX5	uncultured_Caudovirales_phage	3.7e-24	62.0
WP_110963219.1\|1306678_1306921_+	transcriptional regulator	A0A2H4J8B4	uncultured_Caudovirales_phage	4.0e-22	66.2
WP_110963220.1\|1306982_1307324_+	hypothetical protein	C5IHK2	Burkholderia_virus	6.3e-13	37.7
WP_110963221.1\|1307357_1308179_+	DUF2303 family protein	I6WAZ8	Burkholderia_virus	2.7e-41	38.9
WP_110963222.1\|1308250_1308697_+	hypothetical protein	NA	NA	NA	NA
WP_110963223.1\|1308693_1309239_+	phosphohydrolase	K7PKJ9	Enterobacteria_phage	2.5e-27	39.2
WP_110963224.1\|1309402_1309612_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_110963225.1\|1309612_1310644_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	3.4e-94	54.1
1310737:1310795	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1872055 : 1881100

uncultured_Caudovirales_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110967886.1\|1872055_1872577_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.7e-25	43.8
WP_110963705.1\|1872736_1873174_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_110963706.1\|1873319_1873745_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_110963707.1\|1873872_1874223_-	hypothetical protein	NA	NA	NA	NA
WP_110963708.1\|1874314_1874644_+	DNA repair protein	NA	NA	NA	NA
WP_110963709.1\|1874832_1875225_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.9e-53	79.1
WP_110963710.1\|1875228_1875591_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	7.1e-39	67.5
WP_110963711.1\|1875590_1875884_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	5.2e-32	68.7
WP_110963712.1\|1875880_1876216_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.5e-43	76.6
WP_110963713.1\|1876212_1877214_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.1e-163	85.7
WP_110963714.1\|1877304_1878306_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_110963715.1\|1878424_1879819_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_110963716.1\|1879819_1881100_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	9.1e-97	54.5

DBSCAN-SWA_4

3767963 : 3821272

Tupanvirus(20.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110965230.1\|3767963_3768464_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_110965231.1\|3768736_3769624_+	acyltransferase	NA	NA	NA	NA
WP_110965232.1\|3769624_3770191_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_110965233.1\|3770500_3771091_+	fasciclin domain-containing protein	NA	NA	NA	NA
WP_110965234.1\|3771147_3771771_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_110965235.1\|3771767_3772442_+	anti-sigma factor	NA	NA	NA	NA
WP_110965236.1\|3773598_3774798_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	6.0e-10	26.6
WP_053163062.1\|3775006_3775864_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_110965237.1\|3776018_3776651_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_110965238.1\|3776800_3779818_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_007980417.1\|3779814_3780144_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_110965239.1\|3780158_3781409_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_110965240.1\|3781431_3782685_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	2.3e-100	53.0
WP_110965242.1\|3782968_3783694_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_110965243.1\|3783826_3784867_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_110965244.1\|3785028_3785853_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_110965245.1\|3785990_3787091_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_110965247.1\|3787374_3788670_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_110965248.1\|3789524_3790337_-	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_110965249.1\|3790509_3791715_-	hypothetical protein	NA	NA	NA	NA
WP_110965250.1\|3791914_3792481_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_110965251.1\|3792625_3793396_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_110965252.1\|3793411_3794632_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_110965253.1\|3794631_3796578_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_110965254.1\|3796745_3798806_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_020796073.1\|3798821_3799352_-	hypothetical protein	NA	NA	NA	NA
WP_110965255.1\|3799430_3800408_-	membrane dipeptidase	NA	NA	NA	NA
WP_110965257.1\|3800630_3801032_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_110965258.1\|3801041_3801272_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	4.0e-19	65.3
WP_110965259.1\|3801289_3801706_+	DUF3010 family protein	NA	NA	NA	NA
WP_110965260.1\|3801837_3802782_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_110965261.1\|3802981_3803926_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_110965262.1\|3804044_3804932_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_110965263.1\|3805073_3806039_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_110965264.1\|3806136_3806613_+	thioesterase	NA	NA	NA	NA
WP_110965265.1\|3806625_3807789_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_110965266.1\|3808183_3808450_+	hypothetical protein	NA	NA	NA	NA
WP_110965267.1\|3808534_3809638_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_110965268.1\|3810151_3811528_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_110965269.1\|3811968_3812916_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_110965270.1\|3812982_3813828_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_110965271.1\|3813824_3815003_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.7e-26	37.1
WP_110965272.1\|3817290_3817884_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_110965273.1\|3817945_3819418_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_110965274.1\|3819571_3821272_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	1.4e-49	29.9

DBSCAN-SWA_5

5446526 : 5535843

uncultured_Caudovirales_phage(20.59%)

holin,protease,tRNA,plate,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110966639.1\|5446526_5447339_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	1.7e-08	33.9
WP_110966640.1\|5447439_5447844_-	SufE family protein	NA	NA	NA	NA
WP_110966641.1\|5447840_5449046_-	cysteine desulfurase	Q2XUY6	environmental_halophage	7.1e-67	34.3
WP_110966643.1\|5449194_5450229_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_110966644.1\|5450261_5450624_-	ArsC family reductase	NA	NA	NA	NA
WP_110966645.1\|5450937_5452569_+	Na+/H+ antiporter	NA	NA	NA	NA
WP_110966646.1\|5452658_5453858_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_110966647.1\|5454009_5456712_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA
WP_110966648.1\|5456758_5457541_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_110966649.1\|5457915_5458653_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_110966650.1\|5458842_5459706_+	elongation factor Ts	NA	NA	NA	NA
WP_011332683.1\|5459918_5460662_+	UMP kinase	NA	NA	NA	NA
WP_110966651.1\|5460658_5461216_+	ribosome recycling factor	NA	NA	NA	NA
WP_110966652.1\|5461229_5461985_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	8.5e-18	38.1
WP_110966653.1\|5461984_5462791_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_110966654.1\|5462787_5463978_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_110966655.1\|5464031_5465384_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_110966656.1\|5465456_5467844_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_110966657.1\|5467889_5468393_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_110966658.1\|5468396_5469452_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_110966659.1\|5469560_5470001_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_110966660.1\|5469997_5470774_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_110966661.1\|5470776_5471907_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_110966662.1\|5471918_5472545_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	4.4e-28	40.0
WP_110966663.1\|5472619_5476141_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	2.3e-198	36.7
WP_110966664.1\|5476280_5477228_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_110966665.1\|5477361_5478690_+\|tRNA	tRNA lysidine(34) synthetase TilS	A7IXR9	Paramecium_bursaria_Chlorella_virus	2.2e-05	21.8
WP_110966666.1\|5478964_5480596_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.6e-157	52.9
WP_110966667.1\|5480601_5481447_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.5e-50	43.2
WP_110966668.1\|5481604_5482894_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.6e-136	59.4
WP_007996937.1\|5483064_5483343_+	cell division protein FtsB	NA	NA	NA	NA
WP_110966669.1\|5483339_5484047_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_110966670.1\|5484043_5484943_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_110966671.1\|5485050_5486163_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	5.2e-32	28.3
WP_110966672.1\|5486171_5487020_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_110966673.1\|5487061_5487535_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_110966674.1\|5487531_5488590_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_110966675.1\|5488577_5489327_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.8e-66	52.6
WP_110966676.1\|5489326_5490004_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.1e-43	53.1
WP_110966677.1\|5490216_5491074_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	6.5e-06	33.3
WP_110966678.1\|5491178_5492186_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
WP_110966679.1\|5492672_5492996_-	ferredoxin family protein	NA	NA	NA	NA
WP_110966680.1\|5493138_5495718_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	5.3e-27	23.7
WP_110967983.1\|5495917_5496652_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	1.3e-127	92.6
WP_110966681.1\|5497147_5497498_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	7.1e-52	88.8
WP_110966682.1\|5497527_5498046_+	hypothetical protein	NA	NA	NA	NA
WP_110966683.1\|5498049_5498661_+\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	9.5e-44	57.1
WP_110966684.1\|5498672_5499005_+\|plate	phage baseplate protein	A0A2H4JI46	uncultured_Caudovirales_phage	4.2e-38	70.0
WP_110966685.1\|5499001_5499997_+\|plate	baseplate J protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.1e-108	63.5
WP_110966686.1\|5499993_5500629_+\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	5.4e-42	52.2
WP_110966687.1\|5502433_5502862_+\|tail	phage tail protein	A0A291LAV4	Bordetella_phage	4.6e-29	51.1
WP_110966688.1\|5502959_5503169_+	hypothetical protein	NA	NA	NA	NA
WP_110966689.1\|5503171_5504338_+\|tail	phage tail protein	B0ZSG8	Halomonas_phage	1.4e-128	57.5
WP_110966690.1\|5504337_5504844_+\|tail	phage tail protein	Q6R4W3	Vibrio_virus	9.0e-24	36.9
WP_110966692.1\|5505000_5505585_+\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	2.5e-25	37.0
WP_110966693.1\|5505713_5507885_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_110966694.1\|5507884_5508268_+\|tail	phage tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	2.9e-35	52.8
WP_110966695.1\|5508260_5508473_+\|tail	phage tail protein	A0A2H4JGD9	uncultured_Caudovirales_phage	6.9e-18	60.0
WP_110966696.1\|5508482_5509499_+	phage late control D family protein	A0A2H4JH05	uncultured_Caudovirales_phage	5.7e-110	59.3
WP_110966697.1\|5509645_5510209_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	2.3e-84	81.7
WP_110966698.1\|5510190_5510727_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	1.3e-57	72.5
WP_110967984.1\|5510807_5511308_+	CinA family protein	B5TK85	Pseudomonas_phage	1.1e-69	81.3
WP_110966699.1\|5511391_5512450_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.0e-109	58.7
WP_110966700.1\|5512458_5512923_+	recombination regulator RecX	NA	NA	NA	NA
WP_110966701.1\|5512964_5514089_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_110966702.1\|5514571_5514772_+	hypothetical protein	NA	NA	NA	NA
WP_110966703.1\|5514772_5515195_-	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA
WP_110966704.1\|5515385_5516129_+	DTW domain-containing protein	NA	NA	NA	NA
WP_110966705.1\|5516317_5516968_+	response regulator transcription factor	NA	NA	NA	NA
WP_110966706.1\|5517045_5517408_+	diacylglycerol kinase	NA	NA	NA	NA
WP_110966707.1\|5517404_5518331_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003443014.1\|5518464_5519244_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_110966708.1\|5519404_5520103_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_110966709.1\|5520281_5521052_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_110966710.1\|5521234_5521705_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.5e-36	50.7
WP_110966711.1\|5521780_5522491_-	RNA-binding protein	NA	NA	NA	NA
WP_110966712.1\|5522682_5523156_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_110966713.1\|5523358_5524696_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_110966714.1\|5524997_5526899_+	potassium transporter Kup	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	5.0e-75	33.8
WP_110966715.1\|5527080_5528379_-	virulence factor family protein	NA	NA	NA	NA
WP_110966716.1\|5528378_5531021_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_110966717.1\|5531993_5533055_+	DNA polymerase IV	NA	NA	NA	NA
WP_110966718.1\|5533156_5534110_-	hypothetical protein	NA	NA	NA	NA
WP_110966719.1\|5534127_5535843_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_6

5717226 : 5728309

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110966885.1\|5717226_5718165_+	aspartyl/asparaginyl beta-hydroxylase domain-containing protein	H8ZJK8	Ostreococcus_tauri_virus	1.1e-35	40.4
WP_110967989.1\|5718768_5719668_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_110966886.1\|5719671_5720742_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.3e-87	47.8
WP_110966887.1\|5720738_5721635_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.4e-27	34.1
WP_110966888.1\|5721637_5722522_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.2e-101	60.3
WP_110966889.1\|5722521_5723067_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.2e-51	56.2
WP_110966890.1\|5723066_5723888_+	ABC transporter permease	NA	NA	NA	NA
WP_110966891.1\|5723877_5725275_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-06	28.7
WP_110966892.1\|5725267_5728309_+	glycosyltransferase	A0A1V0SAH6	Catovirus	6.7e-05	32.6

DBSCAN-SWA_7

6189628 : 6264184

Pseudomonas_virus(48.72%)

head,holin,tRNA,terminase,integrase,portal,plate,tail,lysis,capsid

attL 6184546:6184573|attR 6252077:6252104

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6184546:6184573	attL	NA	NA	NA	NA
WP_110967253.1\|6189628_6190639_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_110968003.1\|6190741_6191866_+\|integrase	tyrosine-type recombinase/integrase	L7TP61	Pseudomonas_virus	6.5e-139	64.9
WP_110967254.1\|6191867_6192143_-	Pyocin activator protein PrtN	A0A2K8HN48	Pseudomonas_phage	5.1e-21	57.1
WP_162634932.1\|6192334_6192472_-	hypothetical protein	NA	NA	NA	NA
WP_110968004.1\|6192510_6192825_-	hypothetical protein	NA	NA	NA	NA
WP_110968005.1\|6192836_6195635_-	toprim domain-containing protein	A0A2H4J936	uncultured_Caudovirales_phage	0.0e+00	62.5
WP_110967255.1\|6195640_6195880_-	hypothetical protein	Q9ZXI9	Pseudomonas_virus	3.6e-15	51.4
WP_110967256.1\|6195950_6196325_-	hypothetical protein	A0A2H4J947	uncultured_Caudovirales_phage	1.1e-10	40.0
WP_110967257.1\|6196321_6196615_-	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	4.9e-14	44.7
WP_110967258.1\|6196611_6197085_-	hypothetical protein	A0A2H4JG61	uncultured_Caudovirales_phage	7.1e-55	66.9
WP_110967259.1\|6197114_6197315_-	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	5.0e-10	56.1
WP_110968006.1\|6197399_6197744_+	helix-turn-helix domain-containing protein	A0A2H4JFL3	uncultured_Caudovirales_phage	7.5e-22	51.5
WP_110967260.1\|6198156_6199425_-	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	1.1e-192	80.4
WP_110967261.1\|6199421_6199862_-\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	7.5e-59	74.7
WP_110967262.1\|6199868_6202763_-\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	1.6e-117	32.5
WP_110967263.1\|6202752_6202872_-\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	2.7e-11	84.6
WP_110967264.1\|6202880_6203228_-\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	3.9e-26	57.4
WP_110967265.1\|6203276_6203792_-\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	6.9e-72	75.4
WP_110967266.1\|6203849_6205022_-\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	2.6e-175	78.7
WP_110967267.1\|6208073_6208694_-\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	1.8e-74	67.8
WP_110967268.1\|6208693_6209605_-\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	1.1e-125	78.7
WP_110967269.1\|6209601_6209946_-\|plate	baseplate assembly protein	Q9ZXK9	Pseudomonas_virus	3.0e-39	70.8
WP_110968007.1\|6209942_6210515_-\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	3.0e-60	64.0
WP_110967270.1\|6210745_6211549_+	hypothetical protein	NA	NA	NA	NA
WP_110967271.1\|6211557_6212013_-	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	1.6e-43	62.9
WP_110967272.1\|6212005_6212542_-\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	5.7e-61	63.3
WP_110967273.1\|6212634_6213078_-\|lysis	LysB family phage lysis regulatory protein	Q9ZXL5	Pseudomonas_virus	1.4e-28	53.6
WP_110967274.1\|6213074_6213281_-	hypothetical protein	NA	NA	NA	NA
WP_110967275.1\|6213277_6214117_-	DUF3380 domain-containing protein	Q9ZXL6	Pseudomonas_virus	3.2e-90	67.5
WP_110967276.1\|6214113_6214428_-\|holin	phage holin, lambda family	A0A2H4JFM8	uncultured_Caudovirales_phage	5.0e-25	52.9
WP_110967277.1\|6214497_6214707_-\|tail	phage tail protein	A0A2H4J946	uncultured_Caudovirales_phage	3.7e-24	79.7
WP_110967278.1\|6214706_6215171_-\|head	head completion/stabilization protein	A0A2H4JCS4	uncultured_Caudovirales_phage	2.5e-36	53.8
WP_110967279.1\|6215273_6215975_-\|terminase	terminase	Q9ZXM2	Pseudomonas_virus	7.5e-77	65.1
WP_110967280.1\|6215978_6216986_-\|capsid	phage major capsid protein, P2 family	A0A2H4JCR7	uncultured_Caudovirales_phage	5.4e-137	73.5
WP_110967281.1\|6217023_6217878_-\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	9.7e-95	66.3
WP_110967282.1\|6218029_6219784_+\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	8.4e-287	81.7
WP_110967283.1\|6219783_6220824_+\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	7.3e-153	78.3
WP_110967284.1\|6220980_6221742_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	1.3e-106	69.8
WP_110967285.1\|6221828_6222077_-	hypothetical protein	NA	NA	NA	NA
WP_110967286.1\|6222073_6222331_-	hypothetical protein	NA	NA	NA	NA
WP_110967287.1\|6222330_6222609_-	hypothetical protein	NA	NA	NA	NA
WP_110967288.1\|6222799_6223276_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_110967289.1\|6223628_6223811_+	hypothetical protein	NA	NA	NA	NA
WP_110967290.1\|6224044_6224308_-	hypothetical protein	NA	NA	NA	NA
WP_110968008.1\|6226298_6226589_-	hypothetical protein	NA	NA	NA	NA
WP_110967292.1\|6226812_6227325_-	hypothetical protein	NA	NA	NA	NA
WP_110967293.1\|6227588_6229163_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	4.9e-153	55.1
WP_110968009.1\|6229634_6229997_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_162634933.1\|6230611_6231670_+\|integrase	tyrosine-type recombinase/integrase	A0A248XD46	Klebsiella_phage	6.0e-38	36.7
WP_110968010.1\|6232262_6233693_-	RNA-directed DNA polymerase	A0A0H4TEY7	Erysipelothrix_phage	5.9e-20	25.7
WP_110967296.1\|6234219_6235479_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_162634934.1\|6235965_6236442_+	hypothetical protein	NA	NA	NA	NA
WP_110967297.1\|6236438_6237455_+	hypothetical protein	M1NXP9	Cellulophaga_phage	3.0e-10	28.2
WP_110967298.1\|6237541_6237817_-	hypothetical protein	NA	NA	NA	NA
WP_110967299.1\|6238019_6239417_-	hypothetical protein	A0A0A7NQ77	Enterobacteria_phage	3.3e-15	25.9
WP_110967300.1\|6239517_6240324_-	hypothetical protein	NA	NA	NA	NA
WP_110967301.1\|6240716_6240938_+	hypothetical protein	NA	NA	NA	NA
WP_110967302.1\|6240994_6241780_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_110967303.1\|6241871_6242576_-	murein L,D-transpeptidase catalytic domain family protein	NA	NA	NA	NA
WP_110967304.1\|6242659_6244411_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_110967305.1\|6244555_6245962_+	DUF1254 domain-containing protein	M1IA53	Paramecium_bursaria_Chlorella_virus	3.5e-49	32.8
WP_110968011.1\|6245993_6246323_-	hypothetical protein	NA	NA	NA	NA
WP_110967306.1\|6246567_6247158_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_110967307.1\|6247284_6248079_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_110967308.1\|6248191_6249019_+	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_110967309.1\|6249082_6249406_-	hypothetical protein	NA	NA	NA	NA
WP_110967310.1\|6249409_6249691_-	BrnT family toxin	NA	NA	NA	NA
WP_110967311.1\|6249936_6251454_+	purine permease	NA	NA	NA	NA
WP_110967312.1\|6251767_6251977_-	hypothetical protein	NA	NA	NA	NA
WP_110967313.1\|6252213_6253410_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
6252077:6252104	attR	NA	NA	NA	NA
WP_110967314.1\|6253760_6255776_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_110967315.1\|6255906_6257457_-	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_110967316.1\|6257446_6258535_-	HlyD family secretion protein	NA	NA	NA	NA
WP_110967317.1\|6258767_6260249_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_110967318.1\|6261150_6261690_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_110967319.1\|6261720_6262554_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_110967320.1\|6262602_6263064_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_110967321.1\|6263224_6264184_+\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA

DBSCAN-SWA_8

6279359 : 6361962

100

Pseudomonas_phage(52.0%)

head,holin,protease,tRNA,terminase,integrase,portal,tail,lysis,capsid

attL 6299675:6299711|attR 6363195:6363231

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_110967332.1\|6279359_6280184_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_110967333.1\|6280247_6280865_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_110967334.1\|6281065_6281986_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
WP_110967335.1\|6281982_6283290_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_110967336.1\|6283273_6283945_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_110967337.1\|6284043_6284604_+	CvpA family protein	NA	NA	NA	NA
WP_110967338.1\|6284645_6286151_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.5e-86	41.0
WP_110967339.1\|6286224_6287436_+	O-succinylhomoserine sulfhydrylase	NA	NA	NA	NA
WP_110967340.1\|6287432_6288206_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_110967341.1\|6289260_6292092_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_110967342.1\|6292084_6292624_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_110967343.1\|6292626_6293862_+	c-type cytochrome	NA	NA	NA	NA
WP_110967344.1\|6293863_6294835_+	XdhC family protein	NA	NA	NA	NA
WP_110967345.1\|6294887_6296171_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_110967346.1\|6296540_6297677_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J1K3	uncultured_Caudovirales_phage	9.9e-204	92.1
WP_110967347.1\|6297676_6297910_-	hypothetical protein	A0A2H4JA17	uncultured_Caudovirales_phage	5.2e-35	96.1
WP_162634935.1\|6297944_6298100_-	hypothetical protein	NA	NA	NA	NA
WP_162634936.1\|6298132_6298435_+	hypothetical protein	NA	NA	NA	NA
WP_110967349.1\|6298514_6298856_-	hypothetical protein	S4TTI6	Salmonella_phage	8.8e-23	49.5
WP_110967350.1\|6298852_6299188_-	hypothetical protein	NA	NA	NA	NA
WP_110967351.1\|6299240_6299666_-	hypothetical protein	NA	NA	NA	NA
6299675:6299711	attL	NA	NA	NA	NA
WP_110967352.1\|6299764_6300043_+	hypothetical protein	NA	NA	NA	NA
WP_110967353.1\|6300278_6300836_-	hypothetical protein	I6NP82	Burkholderia_phage	4.5e-16	33.9
WP_110967354.1\|6301055_6301961_+	hypothetical protein	NA	NA	NA	NA
WP_110967355.1\|6302030_6302633_+	hypothetical protein	NA	NA	NA	NA
WP_110967356.1\|6302656_6302965_-	hypothetical protein	NA	NA	NA	NA
WP_110967357.1\|6303046_6303361_-	hypothetical protein	NA	NA	NA	NA
WP_110967358.1\|6303357_6303639_-	hypothetical protein	NA	NA	NA	NA
WP_162634937.1\|6304067_6304358_-	hypothetical protein	NA	NA	NA	NA
WP_110967359.1\|6304772_6305087_+	DUF1654 domain-containing protein	A0A2D1GND3	Pseudomonas_phage	7.8e-26	61.5
WP_110967360.1\|6305246_6305450_-	hypothetical protein	NA	NA	NA	NA
WP_110967361.1\|6305477_6306350_-	S24 family peptidase	A0A2D1GNH0	Pseudomonas_phage	7.1e-69	49.5
WP_110967362.1\|6306458_6306665_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA
WP_162634938.1\|6306661_6306877_-	hypothetical protein	NA	NA	NA	NA
WP_110967363.1\|6306961_6307384_+	Rha family transcriptional regulator	A0A2D1GNM7	Pseudomonas_phage	1.7e-31	48.6
WP_110967364.1\|6307451_6308195_+	DNA-binding protein	A0A2D1GNK4	Pseudomonas_phage	2.9e-55	49.2
WP_110967365.1\|6308206_6308980_+	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	9.5e-33	55.2
WP_110967366.1\|6308979_6309636_+	Replication protein P	W6MVG8	Pseudomonas_phage	4.9e-54	51.6
WP_110967367.1\|6309632_6309854_+	DUF3310 domain-containing protein	A0A2I7QLD5	Vibrio_phage	1.6e-22	70.6
WP_110967368.1\|6309850_6310267_+	VRR-NUC domain-containing protein	A0A2D1GNH3	Pseudomonas_phage	7.6e-45	66.4
WP_110967369.1\|6310263_6311544_+\|integrase	site-specific integrase	A0A2D1GND4	Pseudomonas_phage	6.3e-122	53.6
WP_162634939.1\|6311576_6311861_+	hypothetical protein	NA	NA	NA	NA
WP_110967371.1\|6311864_6312428_+	hypothetical protein	A0A2H4J2J2	uncultured_Caudovirales_phage	6.0e-69	60.6
WP_110967373.1\|6312942_6313266_+\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	1.0e-28	63.3
WP_110967375.1\|6313496_6313889_+	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	1.3e-49	68.5
WP_110967376.1\|6314031_6314517_+\|terminase	phage terminase small subunit P27 family	A0A2D1GNP3	Pseudomonas_phage	1.3e-75	86.8
WP_110967377.1\|6314517_6316239_+\|terminase	terminase large subunit	A0A2D1GNU5	Pseudomonas_phage	0.0e+00	91.0
WP_110967378.1\|6316238_6317510_+\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	8.5e-180	73.2
WP_110967379.1\|6317528_6318191_+\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	3.6e-81	67.4
WP_110967380.1\|6318194_6319361_+\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	3.0e-163	75.8
WP_110967381.1\|6319636_6319969_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	2.3e-12	46.6
WP_110967382.1\|6319965_6320304_+\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	2.3e-31	64.3
WP_110968012.1\|6320296_6320782_+	HK97 gp10 family phage protein	A0A0U3TGT7	Pseudomonas_phage	1.8e-53	64.2
WP_110967383.1\|6320781_6321150_+	DUF3168 domain-containing protein	A0A1J0GUW9	Halomonas_phage	1.6e-38	63.1
WP_110967384.1\|6321212_6321941_+\|tail	phage tail protein	H2BDC0	Pseudomonas_virus	2.4e-54	50.8
WP_110967385.1\|6321950_6322376_+\|tail	phage tail protein	Q9MCA4	Pseudomonas_phage	4.4e-40	70.6
WP_110967386.1\|6322372_6322585_+	hypothetical protein	A0A0U4J8S9	Pseudomonas_phage	8.4e-16	56.5
WP_110967387.1\|6322619_6325607_+\|tail	phage tail tape measure protein	A0A0U4JEA4	Pseudomonas_phage	3.0e-135	74.0
WP_110967388.1\|6325638_6326121_+	DUF1833 family protein	J7I404	Pseudomonas_phage	4.7e-30	43.5
WP_110967389.1\|6326117_6326501_+	hypothetical protein	Q9MC96	Pseudomonas_phage	2.6e-23	40.8
WP_110967390.1\|6326497_6329563_+	hypothetical protein	B5WZT8	Pseudomonas_phage	2.2e-226	41.6
WP_110967391.1\|6329572_6330028_+	hypothetical protein	B5WZT5	Pseudomonas_phage	1.1e-47	60.9
WP_110967392.1\|6330086_6332741_+	hypothetical protein	A0A191ZDE7	Pseudoalteromonas_virus	1.4e-96	36.6
WP_110967393.1\|6332792_6333341_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	2.4e-62	66.5
WP_162634940.1\|6333424_6333580_-	hypothetical protein	NA	NA	NA	NA
WP_110967394.1\|6333628_6334744_-	acyltransferase	A9YX16	Burkholderia_phage	9.5e-26	28.9
WP_110967395.1\|6334845_6335271_+	cell wall hydrolase	A0A1B0VMI2	Pseudomonas_phage	1.6e-58	72.3
WP_110967396.1\|6335267_6335780_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	5.7e-42	59.5
WP_110967397.1\|6335749_6336139_-	hypothetical protein	NA	NA	NA	NA
WP_110967398.1\|6336812_6337022_-	hypothetical protein	A0A2D1GNR5	Pseudomonas_phage	9.8e-09	52.4
WP_110967399.1\|6337958_6338153_+	hypothetical protein	NA	NA	NA	NA
WP_110967400.1\|6338208_6338961_-	carbonic anhydrase	NA	NA	NA	NA
WP_110967401.1\|6339206_6339662_+	DUF2214 family protein	NA	NA	NA	NA
WP_077044507.1\|6339786_6339981_-	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	7.9e-13	60.7
WP_110967402.1\|6340231_6340600_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_110967403.1\|6340680_6341370_-	deoxyribonuclease	NA	NA	NA	NA
WP_110967404.1\|6341374_6341614_-	DUF1654 domain-containing protein	A0A2H4J8G7	uncultured_Caudovirales_phage	1.5e-13	56.5
WP_110967405.1\|6341817_6342906_-	asparaginase	NA	NA	NA	NA
WP_110967406.1\|6343248_6343689_+	hypothetical protein	NA	NA	NA	NA
WP_110967407.1\|6343890_6344844_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_110967408.1\|6344895_6346449_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.4e-13	30.9
WP_110967409.1\|6346445_6347423_+	ABC transporter permease	NA	NA	NA	NA
WP_110967410.1\|6347426_6348446_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.9e-34	31.0
WP_110967411.1\|6348470_6349388_+	ribokinase	NA	NA	NA	NA
WP_110967412.1\|6349384_6349789_+	D-ribose pyranase	NA	NA	NA	NA
WP_110968013.1\|6349880_6350843_+	nucleoside hydrolase	NA	NA	NA	NA
WP_110967413.1\|6350861_6351071_-	hypothetical protein	NA	NA	NA	NA
WP_110967414.1\|6351203_6351509_+	hypothetical protein	NA	NA	NA	NA
WP_110967415.1\|6351677_6351998_+	hypothetical protein	NA	NA	NA	NA
WP_003179963.1\|6352069_6352282_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	9.9e-17	62.7
WP_110967416.1\|6352574_6352874_-	hypothetical protein	NA	NA	NA	NA
WP_110967417.1\|6353246_6355169_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.2e-124	37.5
WP_085722946.1\|6355186_6355720_+	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	1.5e-13	39.3
WP_002553160.1\|6355780_6355975_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_007905879.1\|6356003_6356360_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_110967418.1\|6356469_6357486_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.1e-28	39.3
WP_110967419.1\|6357512_6359894_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_002553164.1\|6359897_6360200_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.8e-11	38.9
WP_003179985.1\|6360180_6360537_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_110967420.1\|6360783_6361962_-\|integrase	tyrosine-type recombinase/integrase	A0A059VF45	Pseudomonas_phage	4.7e-156	67.8
6363195:6363231	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP029693

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection