CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP029692	Escherichia coli strain SD134209 chromosome, complete genome	3 crisprs	DinG,PrimPol,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14i	5	19
NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	1 crisprs	NA	2	1
NZ_CP029691	Escherichia coli strain SD134209 plasmid pSD134209-2, complete sequence	0 crisprs	NA	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP029692_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029692_1

1768361-1768484

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029692_1

>merge|NZ_CP029692|1|1768361-1768484|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP029692|1|1|1768361-1768484|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029692.1\|WP_001297805.1\|1763209_1763848_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP029692.1\|WP_001295403.1\|1757813_1759226_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP029692.1\|WP_000701040.1\|1777635_1778805_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP029692.1\|WP_000716921.1\|1766190_1767795_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP029692.1\|WP_000212657.1\|1767920_1768226_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP029692.1\|WP_001273518.1\|1761094_1763197_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP029692.1\|WP_023982239.1\|1763911_1764580_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP029692.1\|WP_000269501.1\|1775127_1776060_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP029692.1\|WP_001174940.1\|1770095_1771469_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP029692.1\|WP_000528342.1\|1759782_1759992_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP029692.1\|WP_000102278.1\|1777380_1777470_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP029692.1\|WP_001344652.1\|1764576_1765332_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP029692.1\|WP_000493947.1\|1771683_1772325_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP029692.1\|WP_000190982.1\|1776056_1777082_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP029692.1\|WP_000098896.1\|1772364_1773513_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP029692.1\|WP_000587564.1\|1765366_1766179_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP029692.1\|WP_000534296.1\|1768798_1770055_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP029692.1\|WP_001182363.1\|1773803_1775015_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP029692.1\|WP_000007283.1\|1778950_1779532_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP029692.1\|WP_001070230.1\|1760447_1761074_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135

Protein	Function_ID	Function_description	E-value
NZ_CP029692.1\|WP_001297805.1\|1763209_1763848_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	1.93584e-120
NZ_CP029692.1\|WP_001295403.1\|1757813_1759226_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP029692.1\|WP_000701040.1\|1777635_1778805_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP029692.1\|WP_000716921.1\|1766190_1767795_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP029692.1\|WP_000212657.1\|1767920_1768226_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP029692.1\|WP_001273518.1\|1761094_1763197_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP029692.1\|WP_023982239.1\|1763911_1764580_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	8.75126e-74
NZ_CP029692.1\|WP_000269501.1\|1775127_1776060_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP029692.1\|WP_001174940.1\|1770095_1771469_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP029692.1\|WP_000528342.1\|1759782_1759992_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP029692.1\|WP_001344652.1\|1764576_1765332_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.53271e-138
NZ_CP029692.1\|WP_000493947.1\|1771683_1772325_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP029692.1\|WP_000190982.1\|1776056_1777082_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP029692.1\|WP_000098896.1\|1772364_1773513_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP029692.1\|WP_000587564.1\|1765366_1766179_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	8.73676e-174
NZ_CP029692.1\|WP_000534296.1\|1768798_1770055_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP029692.1\|WP_001182363.1\|1773803_1775015_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP029692.1\|WP_000007283.1\|1778950_1779532_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP029692.1\|WP_001070230.1\|1760447_1761074_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140

>NZ_CP029692.1|WP_000212657.1|1767920_1768226_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP029692.1|WP_000716921.1|1766190_1767795_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDIGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP029692.1|WP_000587564.1|1765366_1766179_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERAWVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC
>NZ_CP029692.1|WP_001344652.1|1764576_1765332_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSVTDYGEKIYLYCKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFYLRSSLSLHHGAYATRNL
>NZ_CP029692.1|WP_023982239.1|1763911_1764580_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACSKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKLHLYRRFGQHLIKKENV
>NZ_CP029692.1|WP_001297805.1|1763209_1763848_+|YdhW-family-putative-oxidoreductase-system-protein
MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP029692.1|WP_001273518.1|1761094_1763197_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>NZ_CP029692.1|WP_001070230.1|1760447_1761074_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP029692.1|WP_000528342.1|1759782_1759992_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP029692.1|WP_001295403.1|1757813_1759226_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP029692.1|WP_000534296.1|1768798_1770055_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP029692.1|WP_001174940.1|1770095_1771469_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>NZ_CP029692.1|WP_000493947.1|1771683_1772325_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP029692.1|WP_000098896.1|1772364_1773513_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP029692.1|WP_001182363.1|1773803_1775015_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP029692.1|WP_000269501.1|1775127_1776060_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP029692.1|WP_000190982.1|1776056_1777082_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP029692.1|WP_000102278.1|1777380_1777470_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP029692.1|WP_000701040.1|1777635_1778805_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP029692.1|WP_000007283.1|1778950_1779532_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP029692_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029692_2

3437013-3437285

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

4 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP029692_2

>merge|NZ_CP029692|2|3437013-3437285|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGACGCGGGGAACACAAAACCAAACTTCTCCATAAATTCCATAGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACGAGAGTGCTGACAGGTGTCTCGATTACCTGATCGGTTTATCCCCGCTGGCGCGGGGAACACGAACGCAATATCACGGCGTTCTGCGGCCTCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTCGGGCCGGGTAAGTGAACCTGTCGGTTTTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP029692|2|1|3437013-3437285|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAACGCAATATCACGGCGTTCTGCGGCCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP029692|2|2|3437013-3437285|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAACGCAATATCACGGCGTTCTGCGGCCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP029692|2|1|3437013-3437285|CRT
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAACCAAACTTCTCCATAAATTCCATAGCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGAGTGCTGACAGGTGTCTCGATTACCTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAACGCAATATCACGGCGTTCTGCGGCCTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCGGGCCGGGTAAGTGAACCTGTCGGTTTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029692.1\|WP_000144863.1\|3437674_3438595_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP029692.1\|WP_000085038.1\|3439223_3439970_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP029692.1\|WP_001219242.1\|3430613_3431093_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP029692.1\|WP_001246104.1\|3432326_3432650_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP029692.1\|WP_000490429.1\|3435893_3436931_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP029692.1\|WP_001295182.1\|3428825_3429587_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP029692.1\|WP_000517476.1\|3431821_3432133_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP029692.1\|WP_000063176.1\|3437381_3437675_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP029692.1\|WP_001173673.1\|3432699_3433305_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP029692.1\|WP_000246138.1\|3431092_3431803_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP029692.1\|WP_001084109.1\|3441583_3443146_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP029692.1\|WP_001233921.1\|3443243_3445943_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP029692.1\|WP_001090398.1\|3433304_3434732_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP029692.1\|WP_000206431.1\|3439980_3441036_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP029692.1\|WP_000568972.1\|3429567_3430617_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP029692.1\|WP_000372108.1\|3434733_3435642_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP029692.1\|WP_000281442.1\|3438591_3439242_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP029692.1\|WP_000029342.1\|3441047_3441587_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP029692.1\|WP_000956458.1\|3446136_3446289_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP029692.1\|WP_000039843.1\|3446553_3447288_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997

Protein	Function_ID	Function_description	E-value
NZ_CP029692.1\|WP_000144863.1\|3437674_3438595_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.23259e-157
NZ_CP029692.1\|WP_000085038.1\|3439223_3439970_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.02728e-49
NZ_CP029692.1\|WP_001219242.1\|3430613_3431093_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP029692.1\|WP_001246104.1\|3432326_3432650_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP029692.1\|WP_000490429.1\|3435893_3436931_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP029692.1\|WP_001295182.1\|3428825_3429587_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP029692.1\|WP_000517476.1\|3431821_3432133_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP029692.1\|WP_000063176.1\|3437381_3437675_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.35543e-65
NZ_CP029692.1\|WP_001173673.1\|3432699_3433305_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP029692.1\|WP_000246138.1\|3431092_3431803_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP029692.1\|WP_001084109.1\|3441583_3443146_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP029692.1\|WP_001233921.1\|3443243_3445943_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.73288e-179
NZ_CP029692.1\|WP_001090398.1\|3433304_3434732_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP029692.1\|WP_000206431.1\|3439980_3441036_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	6.10696e-155
NZ_CP029692.1\|WP_000568972.1\|3429567_3430617_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP029692.1\|WP_000372108.1\|3434733_3435642_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP029692.1\|WP_000281442.1\|3438591_3439242_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	7.04911e-92
NZ_CP029692.1\|WP_000029342.1\|3441047_3441587_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	7.30002e-26
NZ_CP029692.1\|WP_000956458.1\|3446136_3446289_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP029692.1\|WP_000039843.1\|3446553_3447288_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.99311e-138

>NZ_CP029692.1|WP_000490429.1|3435893_3436931_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP029692.1|WP_000372108.1|3434733_3435642_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP029692.1|WP_001090398.1|3433304_3434732_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTSGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP029692.1|WP_001173673.1|3432699_3433305_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP029692.1|WP_001246104.1|3432326_3432650_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP029692.1|WP_000517476.1|3431821_3432133_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP029692.1|WP_000246138.1|3431092_3431803_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP029692.1|WP_001219242.1|3430613_3431093_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP029692.1|WP_000568972.1|3429567_3430617_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEYILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP029692.1|WP_001295182.1|3428825_3429587_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP029692.1|WP_000063176.1|3437381_3437675_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP029692.1|WP_000144863.1|3437674_3438595_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPQPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG
>NZ_CP029692.1|WP_000281442.1|3438591_3439242_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFVQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP029692.1|WP_000085038.1|3439223_3439970_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGGDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGAWLSKEEPCTSQE
>NZ_CP029692.1|WP_000206431.1|3439980_3441036_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEDKKAIEWSAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP029692.1|WP_000029342.1|3441047_3441587_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWREELQAKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP029692.1|WP_001084109.1|3441583_3443146_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGTAWQFLLGLLQTSFAPKNHGRWDDIWQDGLEAEKLREALLSLEHAFQFGADSPSFMQDFEALKGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP029692.1|WP_001233921.1|3443243_3445943_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKNRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGQPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIESPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>NZ_CP029692.1|WP_000956458.1|3446136_3446289_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP029692.1|WP_000039843.1|3446553_3447288_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP029692_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029692_3

3462987-3463381

Unclear

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAAC	PILER-CR

6 spacers

The CRISPR arrays of NZ_CP029692_3

>merge|NZ_CP029692|3|3462987-3463381|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAGCTCTACGTGAAGAATATTTGCAACACCCGCAAGAACGGTTTATCCCCGCTGGCGCGGGGAACACTCCAACCTTCCATGAGATACGCGCATTAGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACCGTGACCGCCTGTACACGCTGTAATGGCTCACCGGTTTATCCCCGCTGGCGCGGGGAACACACACTATCCGGGCGGTATTACGCCCAAATATCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGCCGGGTGAAACCACTCGCGGCAGATCTTGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP029692|3|3|3462987-3463381|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
CGGTTTATCCCCGCTGGCGCGGGGAGCTC	TACGTGAAGAATATTTGCAACACCCGCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCAACCTTCCATGAGATACGCGCATTAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTGACCGCCTGTACACGCTGTAATGGCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACACTATCCGGGCGGTATTACGCCCAAATATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGCCGGGTGAAACCACTCGCGGCAGATCTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP029692|3|2|3462987-3463379|CRT
TGGTTTATCCCCGCTGGCGCGGGGAAC	TCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTC
CGGTTTATCCCCGCTGGCGCGGGGAGC	TCTACGTGAAGAATATTTGCAACACCCGCAAGAA
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACTCCAACCTTCCATGAGATACGCGCATTAGCGG
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACCGTGACCGCCTGTACACGCTGTAATGGCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACACACTATCCGGGCGGTATTACGCCCAAATATC
CGGTTTATCCCCGCTGGCGCGGGGAAC	ACCTGCCGGGTGAAACCACTCGCGGCAGATCTTG
CGGTTTATCCCCGCTGGCGCGGGGAAC

>NZ_CP029692|3|2|3462988-3463379|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACT	CGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAGCT	CTACGTGAAGAATATTTGCAACACCCGCAAGAAC
GGTTTATCCCCGCTGGCGCGGGGAACA	CTCCAACCTTCCATGAGATACGCGCATTAGCGGC
GGTTTATCCCCGCTGGCGCGGGGAACA	CCGTGACCGCCTGTACACGCTGTAATGGCTCACC
GGTTTATCCCCGCTGGCGCGGGGAACA	CACACTATCCGGGCGGTATTACGCCCAAATATCC
GGTTTATCCCCGCTGGCGCGGGGAACA	CCTGCCGGGTGAAACCACTCGCGGCAGATCTTGC
GGTTTATCCCCGCTGGCGCGGGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029692.1\|WP_000021329.1\|3458462_3459248_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP029692.1\|WP_000226815.1\|3470390_3472625_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP029692.1\|WP_000059312.1\|3456938_3458393_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP029692.1\|WP_001341835.1\|3454750_3455530_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP029692.1\|WP_000254745.1\|3469729_3470065_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP029692.1\|WP_000147666.1\|3455507_3456917_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP029692.1\|WP_001341834.1\|3453893_3454754_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP029692.1\|WP_001288224.1\|3464530_3464671_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029692.1\|WP_000036723.1\|3465616_3466915_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP029692.1\|WP_000039753.1\|3460869_3462348_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP029692.1\|WP_001130266.1\|3453170_3453746_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP029692.1\|WP_001199970.1\|3463720_3464392_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP029692.1\|WP_000581937.1\|3470064_3470313_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP029692.1\|WP_001071648.1\|3468867_3469659_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP029692.1\|WP_001299098.1\|3451631_3452903_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP029692.1\|WP_001268451.1\|3464684_3465557_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP029692.1\|WP_001164569.1\|3459566_3460844_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP029692.1\|WP_000186445.1\|3474029_3476786_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP029692.1\|WP_000210878.1\|3467002_3468640_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP029692.1\|WP_000109367.1\|3452893_3453154_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289

Protein	Function_ID	Function_description	E-value
NZ_CP029692.1\|WP_000021329.1\|3458462_3459248_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.61186e-139
NZ_CP029692.1\|WP_000226815.1\|3470390_3472625_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP029692.1\|WP_000059312.1\|3456938_3458393_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82
NZ_CP029692.1\|WP_001341835.1\|3454750_3455530_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	3.2021e-62
NZ_CP029692.1\|WP_000254745.1\|3469729_3470065_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
NZ_CP029692.1\|WP_000147666.1\|3455507_3456917_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
NZ_CP029692.1\|WP_001341834.1\|3453893_3454754_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	5.55254e-89
NZ_CP029692.1\|WP_000036723.1\|3465616_3466915_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP029692.1\|WP_000039753.1\|3460869_3462348_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.84635e-108
NZ_CP029692.1\|WP_001130266.1\|3453170_3453746_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP029692.1\|WP_001199970.1\|3463720_3464392_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.73859e-155
NZ_CP029692.1\|WP_000581937.1\|3470064_3470313_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP029692.1\|WP_001071648.1\|3468867_3469659_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP029692.1\|WP_001299098.1\|3451631_3452903_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	2.77152e-127
NZ_CP029692.1\|WP_001268451.1\|3464684_3465557_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.01855e-100
NZ_CP029692.1\|WP_001164569.1\|3459566_3460844_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	3.54023e-29
NZ_CP029692.1\|WP_000186445.1\|3474029_3476786_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP029692.1\|WP_000210878.1\|3467002_3468640_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP029692.1\|WP_000109367.1\|3452893_3453154_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	8.55479e-42

>NZ_CP029692.1|WP_000039753.1|3460869_3462348_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPYADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP029692.1|WP_001164569.1|3459566_3460844_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEVRTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP029692.1|WP_000021329.1|3458462_3459248_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDSMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP029692.1|WP_000059312.1|3456938_3458393_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP029692.1|WP_000147666.1|3455507_3456917_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP029692.1|WP_001341835.1|3454750_3455530_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRIEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP029692.1|WP_001341834.1|3453893_3454754_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP029692.1|WP_001130266.1|3453170_3453746_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP029692.1|WP_000109367.1|3452893_3453154_+|ferredoxin-family-protein
MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP029692.1|WP_001299098.1|3451631_3452903_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL
>NZ_CP029692.1|WP_001199970.1|3463720_3464392_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP029692.1|WP_001288224.1|3464530_3464671_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDDESKITDAAVNLFIQI
>NZ_CP029692.1|WP_001268451.1|3464684_3465557_+|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVYISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>NZ_CP029692.1|WP_000036723.1|3465616_3466915_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP029692.1|WP_000210878.1|3467002_3468640_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP029692.1|WP_001071648.1|3468867_3469659_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP029692.1|WP_000254745.1|3469729_3470065_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP029692.1|WP_000581937.1|3470064_3470313_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP029692.1|WP_000226815.1|3470390_3472625_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP029692.1|WP_000186445.1|3474029_3476786_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVMNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP029692_1	1.1\|1768404\|38\|NZ_CP029692\|CRISPRCasFinder	1768404-1768441	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP029692_2	2.1\|3437042\|32\|NZ_CP029692\|PILER-CR,CRISPRCasFinder,CRT	3437042-3437073	32	NZ_CP050442	Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence	41503-41534	6	0.812
NZ_CP029692_3	3.1\|3463016\|32\|NZ_CP029692\|CRISPRCasFinder	3463016-3463047	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
NZ_CP029692_2	2.2\|3437103\|32\|NZ_CP029692\|PILER-CR,CRISPRCasFinder,CRT	3437103-3437134	32	LT599585	Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid	32377-32408	9	0.719
NZ_CP029692_2	2.3\|3437164\|32\|NZ_CP029692\|PILER-CR,CRISPRCasFinder,CRT	3437164-3437195	32	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	292180-292211	9	0.719
NZ_CP029692_2	2.3\|3437164\|32\|NZ_CP029692\|PILER-CR,CRISPRCasFinder,CRT	3437164-3437195	32	NZ_CP020740	[Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence	20747-20778	9	0.719

1. spacer 1.1|1768404|38|NZ_CP029692|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

2. spacer 2.1|3437042|32|NZ_CP029692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050442 (Tolypothrix sp. PCC 7910 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

aaaaccaaacttctccataaattccatagccg	CRISPR spacer
attactaaacttctgcataaattccataggag	Protospacer
*  **.******** **************  *

3. spacer 3.1|3463016|32|NZ_CP029692|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

4. spacer 2.2|3437103|32|NZ_CP029692|PILER-CR,CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

gagagtgctgacaggtgtctcgattacctgat	CRISPR spacer
ggctttgctggcaggtctctcgattaccttgg	Protospacer
*.   *****.***** ************ .

5. spacer 2.3|3437164|32|NZ_CP029692|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgcaatatcacggcgttctgcggcctcgg	CRISPR spacer
atcggcaatatcacggcgtttttcggcgccgc	Protospacer
.   ****************.* **** .**

6. spacer 2.3|3437164|32|NZ_CP029692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 9, identity: 0.719

gaacgcaatatcacggcgttctgcggcctcgg	CRISPR spacer
accggcaacatcacggcgttcttcggcgccgc	Protospacer
.   ****.************* **** .**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

328800 : 369291

Escherichia_phage(25.0%)

transposase,holin,integrase

attL 328881:328897|attR 352611:352627

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000893251.1\|328800_330054_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-95	47.0
328881:328897	attL	NA	NA	NA	NA
WP_000772642.1\|330409_331624_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	7.5e-133	56.5
WP_000251023.1\|331766_332648_+	hypothetical protein	NA	NA	NA	NA
WP_001352368.1\|333012_334221_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_096891973.1\|334195_334381_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001035842.1\|334380_334812_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	5.1e-28	49.0
WP_001019379.1\|334824_335658_+	hypothetical protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
WP_085948178.1\|335781_336994_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000642924.1\|337082_337493_+	hypothetical protein	G5DES5	Salmonella_phage	2.1e-26	41.9
WP_000480477.1\|337558_338497_+	hypothetical protein	NA	NA	NA	NA
WP_001234405.1\|338586_339405_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	4.7e-46	39.0
WP_000214420.1\|339496_339982_+	antirestriction protein	A9J566	Pseudomonas_phage	2.0e-12	31.0
WP_001186787.1\|339997_340474_+	RadC family protein	NA	NA	NA	NA
WP_000692308.1\|340542_340764_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.1e-10	45.8
WP_085948178.1\|341646_342860_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000942525.1\|343360_344431_+	DNA cytosine methyltransferase	A0A1B1IRZ3	uncultured_Mediterranean_phage	2.6e-20	29.6
WP_001444700.1\|344409_345069_-	HNH endonuclease	NA	NA	NA	NA
WP_001350215.1\|345615_345975_+	hypothetical protein	NA	NA	NA	NA
WP_000284450.1\|345967_346510_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_000188903.1\|346630_346816_-	hypothetical protein	NA	NA	NA	NA
WP_000617443.1\|347111_347393_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001236873.1\|348067_348253_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000560496.1\|349247_349637_+	hypothetical protein	NA	NA	NA	NA
WP_001147279.1\|349707_349935_+	hypothetical protein	NA	NA	NA	NA
WP_000866436.1\|349969_350110_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_000803998.1\|350109_350373_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000662258.1\|350736_350838_-	hypothetical protein	NA	NA	NA	NA
WP_001299013.1\|356321_357179_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
352611:352627	attR	NA	NA	NA	NA
WP_001345034.1\|357427_358297_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.3e-51	41.4
WP_001345033.1\|358456_359050_-	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_085948178.1\|359130_360343_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000474083.1\|360383_360611_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001046293.1\|360719_362045_-	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	8.5e-114	47.8
WP_000339608.1\|362270_363125_+	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA
WP_001102119.1\|363651_364371_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000023922.1\|364381_365809_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_000370308.1\|365801_366497_+	lactate utilization protein C	NA	NA	NA	NA
WP_001209113.1\|366742_367408_-	membrane protein	NA	NA	NA	NA
WP_001159100.1\|367620_369291_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	2.3e-60	31.1

DBSCAN-SWA_2

558229 : 638121

Escherichia_phage(33.33%)

protease,head,tRNA,transposase,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000186631.1\|558229_558709_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_000365177.1\|558912_559707_-	hypothetical protein	NA	NA	NA	NA
WP_001342071.1\|559844_560186_+	HigA family addiction module antidote protein	A0A222YWD7	Escherichia_phage	2.1e-40	74.5
WP_000078269.1\|560299_562804_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	3.8e-115	38.4
WP_000883048.1\|563065_563998_+	glutaminase A	NA	NA	NA	NA
WP_000982172.1\|564000_565293_+	amino acid permease	NA	NA	NA	NA
WP_001026747.1\|565417_565825_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000970323.1\|565825_566284_-	NfeD family protein	NA	NA	NA	NA
WP_000904502.1\|566280_567198_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_001157532.1\|567343_568021_+	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	3.1e-27	33.8
WP_001345010.1\|568007_568790_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_001295322.1\|568852_569707_-	chaperedoxin	NA	NA	NA	NA
WP_000148941.1\|569767_570577_-	NADP(+)-dependent aldehyde reductase	NA	NA	NA	NA
WP_001295836.1\|570566_571190_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_001110573.1\|571160_571847_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-33	35.6
WP_000561841.1\|571843_574258_+	ABC transporter permease	NA	NA	NA	NA
WP_001320180.1\|578879_579140_+	hypothetical protein	NA	NA	NA	NA
WP_001158001.1\|580371_581466_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_000460145.1\|581534_582461_-	HTH-type transcriptional activator AllS	NA	NA	NA	NA
WP_000776388.1\|582690_583173_+	ureidoglycolate lyase	NA	NA	NA	NA
WP_000141275.1\|583250_584066_+	HTH-type transcriptional repressor AllR	NA	NA	NA	NA
WP_001342079.1\|584155_585937_+	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	7.8e-38	27.0
WP_000943558.1\|585949_586726_+	hydroxypyruvate isomerase	NA	NA	NA	NA
WP_000765839.1\|586825_587704_+	2-hydroxy-3-oxopropionate reductase	NA	NA	NA	NA
WP_000401100.1\|587872_589327_+	putative allantoin permease	NA	NA	NA	NA
WP_000006887.1\|589386_590748_+	allantoinase AllB	NA	NA	NA	NA
WP_001298987.1\|590804_592106_+	uracil/xanthine transporter	NA	NA	NA	NA
WP_001315307.1\|592127_593273_+	glycerate 3-kinase	W6LM47	Streptococcus_phage	1.1e-48	41.9
WP_000540946.1\|593401_594187_-	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA
WP_001301144.1\|594197_595433_-	allantoate deiminase	NA	NA	NA	NA
WP_000703909.1\|595454_596504_-	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_000580836.1\|596820_598488_+	acyl-CoA synthetase FdrA	NA	NA	NA	NA
WP_000495365.1\|598497_599757_+	DUF1116 domain-containing protein	NA	NA	NA	NA
WP_000152513.1\|599767_600583_+	DUF2877 domain-containing protein	NA	NA	NA	NA
WP_000855355.1\|600579_601473_+	carbamate kinase	NA	NA	NA	NA
WP_000815554.1\|601609_602677_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001295318.1\|602673_603183_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_000212252.1\|603300_604023_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_000256002.1\|604025_604520_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_000912342.1\|604693_606079_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.0e-45	34.8
WP_001143540.1\|606114_606636_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|606743_606956_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729154.1\|606957_607824_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000776555.1\|608304_608847_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_000988363.1\|609066_609759_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_001345007.1\|609789_612399_+	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_001255226.1\|613450_613966_+	fimbria assembly protein	NA	NA	NA	NA
WP_000805428.1\|613968_614601_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
WP_001345004.1\|615811_616144_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	5.0e-55	99.1
WP_000063245.1\|616199_617225_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.1e-188	97.4
WP_000158868.1\|617266_617662_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	5.7e-58	95.5
WP_000752958.1\|617673_617973_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	8.4e-46	98.9
WP_085947772.1\|617993_619206_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
WP_000985132.1\|619299_619878_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.0
WP_000683103.1\|619874_620270_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	1.4e-69	98.5
WP_001342267.1\|620277_621018_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.0e-129	98.0
WP_000479169.1\|621033_621456_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.1e-70	96.4
WP_000459457.1\|621437_621872_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000840226.1\|621864_624045_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.7
WP_085948178.1\|624050_625263_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000239881.1\|625333_626002_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937502.1\|626058_626364_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-12	76.5
WP_001226384.1\|626547_628032_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001201824.1\|628218_629172_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
WP_001177454.1\|629684_630446_-	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA
WP_001224569.1\|630628_631519_-	DUF4434 family protein	NA	NA	NA	NA
WP_001345000.1\|631519_634492_-	bacteriophage adsorption protein NfrA	NA	NA	NA	NA
WP_000383942.1\|634478_636716_-	phage adsorption protein NrfB	NA	NA	NA	NA
WP_000420935.1\|636984_638121_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

857655 : 891724

Enterobacteria_phage(55.26%)

head,holin,integrase,transposase,capsid,tail

attL 852248:852264|attR 884039:884055

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
852248:852264	attL	NA	NA	NA	NA
WP_000263438.1\|857655_858732_-\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	1.8e-199	99.4
WP_000638251.1\|858745_859156_-	lysozyme	A0A0N7KZA0	Stx2-converting_phage	1.1e-64	99.2
WP_085948178.1\|859139_860353_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000075117.1\|860358_860556_-	hypothetical protein	A0A0N7KZA0	Stx2-converting_phage	1.2e-19	100.0
WP_000411800.1\|860555_860762_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	5.3e-31	98.5
WP_000023272.1\|861209_863060_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	95.9
WP_000499454.1\|863358_863517_-	DUF3927 family protein	NA	NA	NA	NA
WP_001302581.1\|863602_864346_-	hypothetical protein	NA	NA	NA	NA
WP_001097238.1\|864530_865220_-	Q antiterminator encoded by prophage CP-933P	I6PDF8	Cronobacter_phage	1.5e-58	48.1
WP_032178163.1\|865234_865357_-	YlcG family protein	NA	NA	NA	NA
WP_000750155.1\|865696_866656_+	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_000994516.1\|866867_867056_-	protein ninH	A5VW84	Enterobacteria_phage	5.5e-27	100.0
WP_001008192.1\|867052_867415_-	RusA family crossover junction endodeoxyribonuclease	A5VW85	Enterobacteria_phage	3.5e-62	98.3
WP_000002251.1\|867411_867702_-	DUF1364 domain-containing protein	K7PK25	Enterobacteria_phage	7.1e-50	97.9
WP_001286917.1\|867694_867907_-	hypothetical protein	K7PK10	Enterobacteria_phage	1.6e-35	100.0
WP_000950962.1\|867899_868076_-	protein ninF	A0A220NRM2	Escherichia_phage	1.9e-26	100.0
WP_000386661.1\|868075_868435_-	DUF2591 family protein	G8EYI2	Enterobacteria_phage	2.7e-62	95.0
WP_001254255.1\|868437_868614_-	NinE family protein	A5VW90	Enterobacteria_phage	4.6e-28	100.0
WP_000814614.1\|868610_869021_-	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	2.1e-71	98.5
WP_000344554.1\|868992_869355_-	hypothetical protein	A0A2I6PIG0	Escherichia_phage	4.4e-33	67.9
WP_000818841.1\|869372_869579_-	hypothetical protein	G8C7M4	Escherichia_phage	7.9e-27	98.5
WP_000145948.1\|869651_869942_-	hypothetical protein	K7PH23	Enterobacteria_phage	2.5e-50	100.0
WP_001254039.1\|871868_873374_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.6e-100	54.0
WP_000256792.1\|873410_873758_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.0e-22	58.1
WP_000522630.1\|873815_874844_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.3e-114	61.3
WP_000201528.1\|874895_875270_+	hypothetical protein	NA	NA	NA	NA
WP_001204544.1\|875262_875616_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	2.5e-41	69.2
WP_000975037.1\|875630_876206_+\|tail	tail protein	A0A2R9YJK4	Escherichia_phage	7.5e-51	58.7
WP_000683071.1\|876202_876598_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	4.2e-61	87.0
WP_001143011.1\|876605_877358_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.9e-132	97.2
WP_000479083.1\|877371_877803_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000533403.1\|877829_878243_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_061104268.1\|878223_880803_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	80.3
WP_000847298.1\|880799_881129_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_000194798.1\|881836_882580_+\|tail	phage tail protein	Q9EYE4	Enterobacteria_phage	3.7e-151	100.0
WP_072147834.1\|882525_883155_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	3.5e-110	99.5
WP_000514984.1\|883395_886872_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.5
884039:884055	attR	NA	NA	NA	NA
WP_001230465.1\|886939_887539_+	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	1.8e-108	98.0
WP_000268900.1\|887603_888917_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	9.7e-78	98.9
WP_001023459.1\|888918_889188_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	4.6e-43	96.6
WP_000950982.1\|889293_890175_+	hypothetical protein	A5LH48	Enterobacteria_phage	3.9e-147	90.4
WP_001369236.1\|890398_891229_+	type III secretion system effector Cif	A5LH49	Enterobacteria_phage	7.6e-153	97.8
WP_021351651.1\|891352_891724_-	hypothetical protein	K7PH54	Enterobacteria_phage	1.1e-58	95.1

DBSCAN-SWA_4

1104020 : 1146579

Escherichia_phage(38.46%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000156528.1\|1104020_1105781_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877161.1\|1105966_1106419_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000750416.1\|1106494_1107535_-	porin OmpA	NA	NA	NA	NA
WP_000288710.1\|1107891_1108401_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_001444487.1\|1108673_1109249_+	CRP-S regulon transcriptional coactivator Sxy	NA	NA	NA	NA
WP_000875023.1\|1109211_1111374_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261235.1\|1111383_1111830_-	YccF domain-containing protein	NA	NA	NA	NA
WP_001297106.1\|1111952_1114007_+	DNA helicase IV	A7KV33	Bacillus_phage	7.7e-21	27.9
WP_000424181.1\|1114038_1114497_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847791.1\|1114592_1115255_-	DUF2057 family protein	NA	NA	NA	NA
WP_000665217.1\|1115427_1115841_+	CoA-binding protein	NA	NA	NA	NA
WP_001295356.1\|1115885_1116203_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000116302.1\|1116260_1117451_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000048244.1\|1117545_1117824_+	acylphosphatase	NA	NA	NA	NA
WP_000904442.1\|1117820_1118150_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000375138.1\|1118240_1118900_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	5.2e-48	54.9
WP_000273151.1\|1120300_1120543_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_085948178.1\|1121705_1122919_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000048507.1\|1122970_1124395_-	hypothetical protein	NA	NA	NA	NA
WP_001090200.1\|1124487_1124679_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449192.1\|1124675_1124864_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_000394557.1\|1125395_1125770_-	hypothetical protein	NA	NA	NA	NA
WP_000379580.1\|1125781_1125934_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.9e-07	53.2
WP_000103686.1\|1126206_1126923_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	3.8e-52	42.0
WP_000471549.1\|1126972_1127188_+	transcriptional regulator	NA	NA	NA	NA
WP_000693949.1\|1127184_1127610_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262389.1\|1127681_1128752_+	hypothetical protein	A0A088CD36	Shigella_phage	3.2e-63	65.2
WP_001151153.1\|1128792_1129215_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.1e-64	92.1
WP_001266135.1\|1129211_1129508_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	7.5e-47	93.7
WP_001209481.1\|1129504_1129966_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	3.4e-38	92.9
WP_000403777.1\|1129943_1130300_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
WP_000935420.1\|1130350_1130563_+	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
WP_000224233.1\|1130814_1131078_+	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000207986.1\|1131088_1131958_+	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	5.2e-120	76.8
WP_001278454.1\|1132073_1132178_+	hypothetical protein	NA	NA	NA	NA
WP_000902696.1\|1132366_1132579_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-25	91.4
WP_032280206.1\|1132746_1133007_+	hypothetical protein	NA	NA	NA	NA
WP_001265133.1\|1133026_1134076_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.9
WP_001217436.1\|1134088_1134460_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
WP_000090265.1\|1134449_1134821_+	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
WP_000265267.1\|1134972_1135791_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000917737.1\|1136077_1136275_+	hypothetical protein	S5MQK8	Escherichia_phage	2.6e-27	96.9
WP_000261909.1\|1136412_1137126_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000874357.1\|1137893_1139744_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	95.9
WP_000411814.1\|1140191_1140398_+\|holin	holin	Q6H9V8	Enterobacteria_phage	5.3e-31	98.5
WP_000138558.1\|1140653_1140926_-	hypothetical protein	NA	NA	NA	NA
WP_001003118.1\|1141085_1141619_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
WP_000675929.1\|1141839_1141953_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	5.6e-11	97.3
WP_012816791.1\|1142174_1142360_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_001303878.1\|1142886_1143201_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001303940.1\|1143282_1143507_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	1.7e-19	90.6
WP_085948178.1\|1143556_1144770_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_012817858.1\|1144856_1145750_-	Tir-cytoskeleton coupling protein TccP2	NA	NA	NA	NA
WP_001443410.1\|1146195_1146579_-	hypothetical protein	Q6H9S1	Enterobacteria_phage	4.4e-55	84.3

DBSCAN-SWA_5

1202115 : 1269366

Escherichia_phage(23.53%)

transposase,protease,integrase

attL 1194352:1194366|attR 1225578:1225592

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1194352:1194366	attL	NA	NA	NA	NA
WP_000279869.1\|1202115_1203318_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	3.8e-44	34.4
WP_000282209.1\|1203504_1205322_-	hypothetical protein	NA	NA	NA	NA
WP_001303889.1\|1206433_1206730_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_000579535.1\|1206956_1207154_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000335710.1\|1207372_1208806_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000282084.1\|1209626_1210190_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_000233452.1\|1210344_1212705_+	DEAD/DEAH box helicase family protein	Q84473	Paramecium_bursaria_Chlorella_virus	1.8e-34	32.5
WP_000998045.1\|1213461_1215000_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.7e-299	99.8
WP_085948178.1\|1215211_1216424_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000024297.1\|1217281_1217641_+	diacylglycerol kinase	NA	NA	NA	NA
WP_000591991.1\|1217733_1219353_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_000134927.1\|1219577_1219853_-	hypothetical protein	NA	NA	NA	NA
WP_042352357.1\|1220233_1220932_+	urease accessory protein UreD	NA	NA	NA	NA
WP_000424145.1\|1221022_1221325_+	urease subunit gamma	NA	NA	NA	NA
WP_000612150.1\|1221333_1221654_+	urease subunit beta	NA	NA	NA	NA
WP_000065682.1\|1221646_1223350_+	urease subunit alpha	NA	NA	NA	NA
WP_000966485.1\|1223359_1223824_+	urease accessory protein UreE	NA	NA	NA	NA
WP_001142973.1\|1223824_1224499_+	urease accessory protein UreF	NA	NA	NA	NA
WP_001021388.1\|1224510_1225128_+	urease accessory protein UreG	NA	NA	NA	NA
WP_000803992.1\|1226339_1226603_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
1225578:1225592	attR	NA	NA	NA	NA
WP_001135715.1\|1226904_1227045_+	Hok/Gef family protein	G9L6L7	Escherichia_phage	2.4e-11	66.7
WP_000435663.1\|1230926_1231352_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.4e-33	73.2
WP_000624701.1\|1231348_1231699_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.1e-39	64.7
WP_000088522.1\|1231729_1233343_+\|transposase	IS66-like element IS682 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.1e-166	65.7
WP_000957251.1\|1234285_1234627_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_000042916.1\|1234613_1234943_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_001176766.1\|1235203_1235671_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_000506898.1\|1235688_1236897_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_000797372.1\|1236907_1237864_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_001182418.1\|1237863_1238943_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	6.2e-38	34.4
WP_001040060.1\|1238944_1239718_-	hypothetical protein	NA	NA	NA	NA
WP_001280118.1\|1239710_1240853_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	7.7e-31	35.4
WP_001035166.1\|1240862_1241921_-	hypothetical protein	NA	NA	NA	NA
WP_000254140.1\|1242242_1242824_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	1.7e-13	30.5
WP_001054789.1\|1242823_1243981_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000007449.1\|1244003_1244459_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_000255079.1\|1244481_1245522_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116680.1\|1245570_1246149_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
WP_000301248.1\|1246217_1246793_+	TerD family protein	K4JRX3	Caulobacter_phage	2.5e-30	41.1
WP_001053349.1\|1247218_1247605_+	protein TerF	NA	NA	NA	NA
WP_001223350.1\|1248118_1250209_-	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
WP_000477623.1\|1251661_1251880_+	hypothetical protein	NA	NA	NA	NA
WP_001310149.1\|1252513_1252849_+	hypothetical protein	NA	NA	NA	NA
WP_001004881.1\|1253629_1253824_-	hypothetical protein	NA	NA	NA	NA
WP_001377350.1\|1253875_1254049_-	hypothetical protein	NA	NA	NA	NA
WP_001303898.1\|1254137_1254410_+	hypothetical protein	NA	NA	NA	NA
WP_001340489.1\|1254693_1254909_+	hypothetical protein	NA	NA	NA	NA
WP_000958487.1\|1254974_1255172_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_001231525.1\|1255901_1257026_+	glycosyltransferase	NA	NA	NA	NA
WP_001301456.1\|1258379_1258838_-	hypothetical protein	NA	NA	NA	NA
WP_001167434.1\|1259295_1259805_+	hypothetical protein	NA	NA	NA	NA
WP_001260386.1\|1259893_1260517_+	hypothetical protein	NA	NA	NA	NA
WP_000124179.1\|1260612_1260846_+	hypothetical protein	NA	NA	NA	NA
WP_001287881.1\|1260898_1261090_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001345400.1\|1261764_1262811_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_001304205.1\|1263564_1265733_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_000502842.1\|1267450_1268089_+	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	1.9e-55	52.5
WP_085948178.1\|1268152_1269366_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7

DBSCAN-SWA_6

1375077 : 1461924

Stx2-converting_phage(33.33%)

head,holin,terminase,integrase,transposase,capsid,tail

attL 1370171:1370185|attR 1376652:1376666

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1370171:1370185	attL	NA	NA	NA	NA
WP_000074981.1\|1375077_1376196_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	2.9e-83	43.9
WP_000003742.1\|1376164_1376434_-	excisionase	NA	NA	NA	NA
WP_000048442.1\|1376495_1378961_-	exonuclease	A0A192Y6E0	Salmonella_phage	8.8e-56	57.1
1376652:1376666	attR	NA	NA	NA	NA
WP_001090200.1\|1379053_1379245_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449192.1\|1379241_1379430_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_122993436.1\|1379769_1379910_+	hypothetical protein	NA	NA	NA	NA
WP_001171930.1\|1379913_1380132_-	hypothetical protein	NA	NA	NA	NA
WP_001447517.1\|1380172_1380562_-	hypothetical protein	NA	NA	NA	NA
WP_001303511.1\|1380857_1381136_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001302048.1\|1381137_1381329_-	hypothetical protein	NA	NA	NA	NA
WP_001169687.1\|1381349_1381721_-	hypothetical protein	NA	NA	NA	NA
WP_001444689.1\|1381818_1382121_+	transcriptional regulator	K7PHA1	Enterobacteria_phage	1.5e-05	34.8
WP_085948178.1\|1382317_1383530_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_162616906.1\|1383514_1383856_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000095671.1\|1383878_1384841_+	DNA-binding protein	U5P0A0	Shigella_phage	2.1e-69	51.2
WP_001151120.1\|1384881_1385304_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.3e-63	89.9
WP_000004322.1\|1385300_1385555_+	hypothetical protein	A0A0U2RK51	Escherichia_phage	4.8e-42	94.0
WP_001002672.1\|1385547_1385859_+	hypothetical protein	A0A0U2QV73	Escherichia_phage	1.1e-59	97.1
WP_001204666.1\|1386164_1386743_+	sce7726 family protein	A0A0U2RXY7	Escherichia_phage	2.6e-104	100.0
WP_000156210.1\|1386702_1387800_-	hypothetical protein	A0A0U2S621	Escherichia_phage	1.4e-210	99.5
WP_085948178.1\|1388434_1389648_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_072058819.1\|1389685_1389826_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	2.2e-12	95.0
WP_012817871.1\|1389993_1390266_+	hypothetical protein	I6PCV7	Cronobacter_phage	9.4e-12	49.2
WP_001369253.1\|1390267_1391323_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.4e-87	47.8
WP_000140024.1\|1391323_1391689_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.6e-38	64.3
WP_000640048.1\|1391697_1392228_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
WP_000917750.1\|1392469_1392667_+	hypothetical protein	S5MQK8	Escherichia_phage	1.0e-28	98.5
WP_000935544.1\|1392817_1393876_+	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	2.0e-198	94.0
WP_000874287.1\|1394672_1396523_+	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	98.1
WP_000411802.1\|1396970_1397177_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_000731236.1\|1397181_1397526_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
WP_000992167.1\|1397576_1398110_+	lysozyme	A0A0N7KZF9	Stx2-converting_phage	7.4e-101	98.9
WP_001056806.1\|1398380_1398950_+	hypothetical protein	A0A1I9LJR6	Stx_converting_phage	3.1e-105	100.0
WP_000539792.1\|1398949_1399096_+	hypothetical protein	A0A0P0ZE99	Stx2-converting_phage	2.6e-16	100.0
WP_012816791.1\|1399323_1399509_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000095736.1\|1399933_1400161_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
WP_000279788.1\|1400202_1400568_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	2.0e-65	99.2
WP_000958415.1\|1400858_1401422_+\|terminase	terminase small subunit	A0A0P0ZDD1	Stx2-converting_phage	3.8e-79	100.0
WP_001369319.1\|1401418_1403080_+\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	0.0e+00	98.9
WP_061104266.1\|1403143_1405081_+\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.7
WP_001063099.1\|1405125_1405347_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_000125988.1\|1408035_1408362_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	7.0e-54	100.0
WP_001007905.1\|1408371_1408722_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573391.1\|1408718_1409165_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_110826211.1\|1409161_1409506_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	2.5e-57	99.1
WP_001275472.1\|1409572_1410289_+\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	5.6e-128	98.7
WP_001030042.1\|1410294_1410669_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	6.6e-64	98.4
WP_001453698.1\|1410764_1410974_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_000212932.1\|1411025_1414268_+\|tail	phage tail tape measure protein	A0A0P0ZE78	Stx2-converting_phage	0.0e+00	98.5
WP_000807928.1\|1414260_1414602_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	5.3e-60	95.6
WP_001447444.1\|1414601_1415300_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	4.4e-130	97.4
WP_001302649.1\|1415316_1415637_-	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.0e-49	100.0
WP_001154345.1\|1415744_1415918_+	Arc family DNA-binding protein	A0A0P0ZC65	Stx2-converting_phage	3.4e-23	100.0
WP_000967279.1\|1416965_1417703_+\|tail	phage tail protein	A0A0P0ZDT1	Stx2-converting_phage	1.9e-147	98.8
WP_122996286.1\|1417648_1418281_+\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.0e-104	97.6
WP_000514851.1\|1418517_1421994_+	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	96.7
WP_001230455.1\|1422061_1422661_+	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	8.8e-111	99.0
WP_000279057.1\|1422725_1424039_+\|tail	tail fiber protein	A0A0P0ZCC1	Stx2-converting_phage	3.7e-77	97.0
WP_001023476.1\|1424040_1424310_+\|tail	phage tail protein	A0A1U9AJC2	Stx1_converting_phage	2.7e-43	97.8
WP_122993429.1\|1424715_1425729_+	peptidase M85	NA	NA	NA	NA
WP_001079074.1\|1426963_1427494_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.9e-56	100.0
WP_001007759.1\|1427836_1428487_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_001240109.1\|1428743_1429379_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_000730130.1\|1429379_1430384_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_000920136.1\|1430492_1430906_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_001339045.1\|1431038_1431710_+	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000826738.1\|1431709_1433068_+	two-component system sensor histidine kinase HprS	NA	NA	NA	NA
WP_000218214.1\|1433175_1434027_-	protein deglycase HchA	NA	NA	NA	NA
WP_000824375.1\|1434617_1435781_-	porin OmpC	Q1MVN1	Enterobacteria_phage	7.2e-109	56.2
WP_001313057.1\|1436347_1436713_+	hypothetical protein	NA	NA	NA	NA
WP_000365565.1\|1436752_1437448_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.1e-07	28.0
WP_001157238.1\|1437514_1438933_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.8e-101	55.3
WP_000786004.1\|1438913_1439384_+	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	1.5e-33	47.6
WP_001210913.1\|1439372_1440293_-	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000922683.1\|1440465_1441383_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_000009309.1\|1441461_1441644_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_001377491.1\|1441814_1443509_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	1.3e-18	35.6
WP_000949111.1\|1443505_1444321_-	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_000844800.1\|1444618_1444846_-	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_071524607.1\|1444954_1445197_+	protein DsrB	NA	NA	NA	NA
WP_000103994.1\|1445240_1445864_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_000942326.1\|1446153_1446939_-	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_000187358.1\|1446946_1447216_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_001253450.1\|1447225_1447963_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_001302429.1\|1447962_1448328_-	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001282098.1\|1448330_1448744_-	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001295641.1\|1448740_1449745_-	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_000133124.1\|1449749_1450214_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_000620092.1\|1450318_1451446_-	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000807584.1\|1451442_1451886_-	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000213292.1\|1451904_1453278_-	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_001282694.1\|1453277_1453964_-	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000067950.1\|1453956_1454952_-	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_000994449.1\|1454944_1456603_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_001274299.1\|1456816_1457131_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_001070440.1\|1457464_1457797_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_000734033.1\|1457965_1458517_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_000879833.1\|1458526_1459324_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000826461.1\|1460715_1461924_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SL42	Escherichia_phage	4.9e-209	93.5

DBSCAN-SWA_7

1681378 : 1718477

Enterobacteria_phage(88.57%)

head,holin,terminase,plate,portal,tRNA,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001144192.1\|1681378_1683307_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.2e-130	37.4
WP_001700733.1\|1683310_1683853_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
WP_001124225.1\|1683949_1684147_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_000124850.1\|1684199_1684556_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_001386830.1\|1684678_1684723_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_000018594.1\|1685006_1685990_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.4e-33	38.5
WP_000672378.1\|1686004_1688392_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_001229265.1\|1688396_1688696_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_000078923.1\|1689002_1689143_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	4.5e-18	95.7
WP_000488103.1\|1689333_1689594_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_001035742.1\|1689837_1691340_-	DNA-binding protein	NA	NA	NA	NA
WP_000132811.1\|1691565_1692675_-	phage late control D family protein	A0A0A7NQ97	Enterobacteria_phage	9.6e-204	98.6
WP_000005431.1\|1692832_1694017_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.1e-225	99.0
WP_000290445.1\|1694016_1694529_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	7.8e-92	98.2
WP_000651581.1\|1694584_1694959_+\|tail	tail protein	A0A0A7NPZ0	Enterobacteria_phage	6.9e-37	73.2
WP_000333503.1\|1694967_1695123_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	9.7e-22	96.1
WP_000853433.1\|1695109_1697917_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	94.9
WP_000979957.1\|1697929_1698418_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	3.0e-85	99.4
WP_000954196.1\|1698574_1699147_+	serine acetyltransferase	NA	NA	NA	NA
WP_000144026.1\|1699190_1699769_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.7e-95	89.0
WP_000108519.1\|1699768_1701901_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	4.2e-131	66.7
WP_000071739.1\|1701903_1702434_-\|tail	phage tail protein I	A0A0A7NPV1	Enterobacteria_phage	1.1e-93	99.4
WP_001111942.1\|1702426_1703323_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	1.1e-154	98.0
WP_000213447.1\|1703326_1703677_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
WP_001271894.1\|1703673_1704255_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.0e-100	96.9
WP_000356341.1\|1704251_1704887_-\|tail	tail protein	A0A0A7NV60	Enterobacteria_phage	3.1e-114	99.5
WP_000920593.1\|1704879_1705347_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	1.0e-85	99.4
WP_000780569.1\|1705484_1705892_-	DUF2570 domain-containing protein	A0A0A7NPY2	Enterobacteria_phage	4.5e-66	98.5
WP_000072327.1\|1705888_1706281_-	M15 family metallopeptidase	A0A0A7NQ86	Enterobacteria_phage	5.8e-71	100.0
WP_000104350.1\|1706277_1706601_-\|holin	holin	A0A0A7NRY9	Enterobacteria_phage	1.6e-50	99.1
WP_000864901.1\|1706603_1706804_-\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
WP_000063082.1\|1706803_1707298_-\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	2.7e-89	99.4
WP_000632344.1\|1707400_1708201_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	6.6e-130	91.4
WP_001055104.1\|1708246_1709299_-\|capsid	phage major capsid protein, P2 family	A0A0A7NQ82	Enterobacteria_phage	1.3e-194	97.7
WP_001262673.1\|1709322_1710159_-\|capsid	phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	100.0
WP_000613748.1\|1710313_1712065_+\|terminase	terminase	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.3
WP_000087824.1\|1712064_1713111_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.9e-201	99.1
WP_000236489.1\|1713125_1713650_-	hypothetical protein	NA	NA	NA	NA
WP_001390707.1\|1714212_1714482_-	hypothetical protein	NA	NA	NA	NA
WP_000211267.1\|1714846_1715158_-	chromosome partitioning protein	A0A0A7NPT5	Enterobacteria_phage	2.2e-41	83.5
WP_000686506.1\|1715162_1716122_-	recombinase	A0A0A7NPX4	Enterobacteria_phage	7.1e-179	98.4
WP_000514277.1\|1717655_1717898_-	DUF4754 family protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
WP_000159459.1\|1717909_1718188_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	1.5e-33	78.3
WP_100206497.1\|1718198_1718477_-	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	6.2e-27	93.4

DBSCAN-SWA_8

1841958 : 1944834

114

Stx2-converting_phage(30.0%)

protease,head,holin,lysis,terminase,portal,integrase,transposase,capsid,tail

attL 1867830:1867859|attR 1924852:1924881

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260840.1\|1841958_1842780_-\|protease	serine protease	NA	NA	NA	NA
WP_000233090.1\|1842879_1842963_-	hypothetical protein	NA	NA	NA	NA
WP_032353667.1\|1843055_1843391_-	acid shock protein	NA	NA	NA	NA
WP_110826212.1\|1843787_1845041_-	MFS transporter	NA	NA	NA	NA
WP_001019545.1\|1845147_1846041_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000225276.1\|1846175_1847396_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_000919226.1\|1847520_1848216_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_071526378.1\|1848168_1849461_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
WP_000148710.1\|1849619_1850234_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
WP_000526492.1\|1850276_1851131_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000213028.1\|1851132_1851750_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
WP_001342196.1\|1851760_1854184_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.2e-208	48.6
WP_001307224.1\|1857646_1857952_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_001321287.1\|1858059_1858770_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138581.1\|1858772_1859333_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705211.1\|1859367_1859709_-	DUF1283 family protein	NA	NA	NA	NA
WP_000598292.1\|1859843_1860170_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_001295394.1\|1860375_1861590_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000836079.1\|1861601_1862621_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	9.7e-17	25.9
WP_001360138.1\|1862678_1862789_+	hypothetical protein	NA	NA	NA	NA
WP_000876990.1\|1862808_1864089_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	1.9e-155	62.1
WP_001296941.1\|1864123_1864360_-	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_000048302.1\|1864447_1866919_-	exonuclease	A0A192Y6E0	Salmonella_phage	3.2e-58	56.1
WP_001083273.1\|1867012_1867204_-\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000854559.1\|1867200_1867389_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001328010.1\|1867804_1868092_+	hypothetical protein	NA	NA	NA	NA
1867830:1867859	attL	NA	NA	NA	NA
WP_001344637.1\|1868060_1868426_-	hypothetical protein	NA	NA	NA	NA
WP_000379591.1\|1868437_1868590_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.6e-07	53.2
WP_001003381.1\|1868782_1869190_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-24	46.2
WP_000476993.1\|1869267_1869495_+	transcriptional regulator	NA	NA	NA	NA
WP_000705364.1\|1869478_1870000_+	hypothetical protein	NA	NA	NA	NA
WP_000054483.1\|1869980_1870946_+	hypothetical protein	U5P0A0	Shigella_phage	2.6e-56	60.8
WP_085948952.1\|1871284_1872497_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.2e-168	99.0
WP_085948953.1\|1872463_1872544_+	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	2.2e-06	96.2
WP_001064906.1\|1872628_1873318_+	antiterminator	I6PDF8	Cronobacter_phage	5.5e-56	48.1
WP_085948178.1\|1873584_1874798_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001344632.1\|1875057_1875189_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	5.2e-08	85.7
WP_000143036.1\|1875636_1877487_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	98.4
WP_000411811.1\|1877932_1878139_+\|holin	holin	O48430	Enterobacteria_phage	1.8e-31	100.0
WP_000731236.1\|1878143_1878488_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.0e-58	100.0
WP_000992122.1\|1878538_1879072_+	lysozyme	A0A0N7KZF9	Stx2-converting_phage	2.8e-100	98.3
WP_012578895.1\|1879589_1879775_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	2.7e-18	98.4
WP_000736096.1\|1879860_1880085_+	hypothetical protein	NA	NA	NA	NA
WP_000095736.1\|1880453_1880681_-	DUF3950 domain-containing protein	A0A0P0ZE23	Stx2-converting_phage	1.7e-35	100.0
WP_000279803.1\|1880722_1881088_+	HNH endonuclease	B6DZ96	Enterobacteria_phage	2.9e-64	96.7
WP_000958415.1\|1881377_1881941_+\|terminase	terminase small subunit	A0A0P0ZDD1	Stx2-converting_phage	3.8e-79	100.0
WP_001369319.1\|1881937_1883599_+\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	0.0e+00	98.9
WP_000173011.1\|1883662_1885600_+\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.7
WP_001063099.1\|1885644_1885866_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
WP_012817878.1\|1885811_1888391_+\|portal	phage portal protein	A0A0P0ZDD0	Stx2-converting_phage	0.0e+00	99.8
WP_000125990.1\|1888393_1888720_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	9.2e-54	100.0
WP_001007905.1\|1888729_1889080_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573391.1\|1889076_1889523_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133393.1\|1889519_1889864_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_024222395.1\|1889930_1890647_+\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	1.3e-124	95.8
WP_001030041.1\|1890652_1891027_+\|tail	tail assembly protein	A0A0P0ZE84	Stx2-converting_phage	5.0e-64	98.4
WP_001453698.1\|1891122_1891332_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_000937595.1\|1893440_1894628_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000091308.1\|1894627_1894993_-	hypothetical protein	NA	NA	NA	NA
WP_001369428.1\|1895011_1896454_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	5.1e-229	93.3
WP_000807940.1\|1896446_1896788_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	4.7e-61	97.3
WP_001369426.1\|1896787_1897486_+\|tail	phage minor tail protein L	A0A0P0ZBE3	Stx2-converting_phage	7.6e-130	97.0
WP_001369422.1\|1897491_1898235_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.1e-147	97.2
WP_096860308.1\|1898180_1898813_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	2.3e-101	97.1
WP_000514717.1\|1899155_1902629_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	90.2
WP_001228290.1\|1902696_1903296_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	4.1e-108	97.0
WP_000216548.1\|1903447_1904752_+\|tail	tail fiber protein	A0A0P0ZCC1	Stx2-converting_phage	1.2e-72	95.4
WP_001023476.1\|1904753_1905023_+\|tail	phage tail protein	A0A1U9AJC2	Stx1_converting_phage	2.7e-43	97.8
WP_106409364.1\|1906137_1906260_+	hypothetical protein	Q687E5	Enterobacteria_phage	3.8e-05	91.3
WP_000950979.1\|1906366_1907278_+	type III secretion system effector kinase NleH1-2	A5LH48	Enterobacteria_phage	3.0e-134	82.2
WP_085948178.1\|1907824_1909038_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001303943.1\|1910064_1910343_-	hypothetical protein	NA	NA	NA	NA
WP_001414184.1\|1910770_1910917_+	hypothetical protein	NA	NA	NA	NA
WP_001303944.1\|1911053_1911701_-	T3SS effector E3 ubiquitin-protein ligase NleG	B6ETE1	Enterobacteria_phage	1.6e-41	41.1
WP_001144879.1\|1911884_1912475_+	T3SS effector guanine nucleotide exchange factor EspM1	NA	NA	NA	NA
WP_001261191.1\|1914980_1915334_-	recombinase family protein	NA	NA	NA	NA
WP_000171274.1\|1915424_1916144_+	TonB system transport protein TonB	NA	NA	NA	NA
WP_000108160.1\|1916183_1916582_-	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_000808667.1\|1916686_1917226_-	septation protein A	NA	NA	NA	NA
WP_000028550.1\|1917255_1917999_-	UPF0259 family protein	NA	NA	NA	NA
WP_000737224.1\|1918355_1918994_+	outer membrane protein OmpW	NA	NA	NA	NA
WP_000113674.1\|1919039_1920170_-\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	3.4e-103	51.4
WP_000113189.1\|1920147_1920396_-	excisionase	NA	NA	NA	NA
WP_000048484.1\|1920460_1922932_-	exonuclease	A0A192Y6E0	Salmonella_phage	5.5e-58	57.7
WP_000199480.1\|1923027_1923216_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449172.1\|1923212_1923401_-	cell division inhibitor	NA	NA	NA	NA
WP_001342117.1\|1923800_1923968_+	hypothetical protein	NA	NA	NA	NA
WP_000920491.1\|1923961_1924195_+	hypothetical protein	NA	NA	NA	NA
WP_000394552.1\|1924172_1924580_-	hypothetical protein	A0A2R2Z306	Escherichia_phage	7.0e-11	37.8
WP_001171894.1\|1924602_1924821_-	hypothetical protein	NA	NA	NA	NA
WP_001240336.1\|1924893_1925193_-	hypothetical protein	NA	NA	NA	NA
1924852:1924881	attR	NA	NA	NA	NA
WP_000787428.1\|1925457_1925865_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000705622.1\|1926151_1926703_+	hypothetical protein	NA	NA	NA	NA
WP_000020556.1\|1926674_1927715_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	7.9e-91	87.2
WP_157825328.1\|1927626_1928169_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.5e-85	98.7
WP_000450683.1\|1928202_1928937_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.9e-108	84.3
WP_001505071.1\|1928933_1929098_+	hypothetical protein	NA	NA	NA	NA
WP_001449026.1\|1929796_1930555_+	AcfC family adhesin Paa	NA	NA	NA	NA
WP_000961821.1\|1930833_1931046_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.3e-16	72.9
WP_001217394.1\|1931266_1931524_+	hypothetical protein	NA	NA	NA	NA
WP_032178572.1\|1931593_1931872_+	hypothetical protein	I6PCV7	Cronobacter_phage	2.8e-11	48.4
WP_001265289.1\|1931873_1932929_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.9e-88	47.6
WP_000140002.1\|1932929_1933295_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.6e-38	67.5
WP_001059384.1\|1933291_1933981_+	antiterminator	I6PDF8	Cronobacter_phage	4.0e-59	51.1
WP_000023139.1\|1935508_1937278_+	SASA family carbohydrate esterase	H6WZJ9	Escherichia_phage	0.0e+00	96.8
WP_085948178.1\|1937329_1938542_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_064764776.1\|1938508_1938631_+	hypothetical protein	A0A0N7BTS3	Escherichia_phage	4.3e-09	86.1
WP_001023452.1\|1938632_1938902_+\|tail	phage tail protein	Q687E5	Enterobacteria_phage	6.4e-45	100.0
WP_000491542.1\|1939042_1939918_+	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	1.5e-162	100.0
WP_001121225.1\|1940142_1940793_-	DUF1076 domain-containing protein	B6ETE1	Enterobacteria_phage	1.2e-121	99.1
WP_096245710.1\|1941388_1941703_-	DinI-like family protein	Q687E4	Enterobacteria_phage	1.3e-25	81.9
WP_000347482.1\|1941762_1943046_+	MHS family MFS transporter	NA	NA	NA	NA
WP_000527750.1\|1943134_1944595_+	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	5.6e-42	30.3
WP_000214712.1\|1944630_1944834_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2

DBSCAN-SWA_9

2084056 : 2203245

120

Escherichia_phage(41.67%)

head,holin,terminase,tRNA,integrase,transposase,capsid,tail

attL 2110351:2110367|attR 2202378:2202394

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000826406.1\|2084056_2085265_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SL42	Escherichia_phage	9.2e-208	93.3
WP_001261013.1\|2085791_2086460_-	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_000586732.1\|2086762_2087356_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_001341359.1\|2087352_2088345_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_001315480.1\|2088536_2089448_+	LbetaH domain-containing protein	NA	NA	NA	NA
WP_000140877.1\|2089442_2089979_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_001296778.1\|2090041_2090266_-	YdcH family protein	NA	NA	NA	NA
WP_000375956.1\|2090405_2092061_-	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_000013783.1\|2092285_2093629_-	VOC family protein	NA	NA	NA	NA
WP_001345051.1\|2093845_2094769_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001098530.1\|2094806_2096447_-	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_001320773.1\|2096845_2096995_+	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_000731833.1\|2097066_2097240_-	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_001307188.1\|2097484_2098015_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
WP_000048667.1\|2098203_2099205_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_001027942.1\|2100745_2101546_-	YdcF family protein	NA	NA	NA	NA
WP_000139621.1\|2101817_2105720_-	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
WP_000048948.1\|2105920_2106526_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_000627379.1\|2106576_2107893_-	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA
WP_000431813.1\|2107882_2109640_-	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000890909.1\|2109655_2110552_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
2110351:2110367	attL	NA	NA	NA	NA
WP_000177525.1\|2110551_2111157_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_000477179.1\|2111327_2113634_-	DUF2773 domain-containing bactofilin	NA	NA	NA	NA
WP_000097801.1\|2113697_2114558_-	pyridoxine 4-dehydrogenase	NA	NA	NA	NA
WP_001123455.1\|2114788_2115379_-	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA
WP_000041176.1\|2115360_2116311_-	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
WP_000632286.1\|2116411_2117725_-	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_001206190.1\|2117751_2118957_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_000018413.1\|2118956_2119379_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA
WP_000973362.1\|2119368_2120796_-	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA
WP_000969777.1\|2120797_2121586_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
WP_001292353.1\|2121585_2122353_-	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA
WP_000206377.1\|2122349_2123420_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA
WP_001189197.1\|2123427_2123925_-	phenylacetate degradation protein PaaD	NA	NA	NA	NA
WP_001072831.1\|2123939_2124686_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA
WP_000073393.1\|2124694_2124982_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
WP_000191073.1\|2124993_2125923_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
WP_001186481.1\|2126207_2128253_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
WP_000535449.1\|2128500_2130774_+	primary-amine oxidase	NA	NA	NA	NA
WP_001067510.1\|2132553_2133459_+	transcriptional regulator FeaR	NA	NA	NA	NA
WP_001345059.1\|2133630_2133960_-	YdbL family protein	NA	NA	NA	NA
WP_000698141.1\|2133964_2134150_-	YnbE family lipoprotein	NA	NA	NA	NA
WP_000900925.1\|2134146_2136786_-	YdbH family protein	NA	NA	NA	NA
WP_000762229.1\|2136993_2137983_+	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
WP_001295716.1\|2138093_2138516_+	heat shock protein HslJ	NA	NA	NA	NA
WP_001295715.1\|2138512_2138779_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_000628171.1\|2139052_2142577_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_000837930.1\|2142943_2144077_+	porin OmpN	Q1MVN1	Enterobacteria_phage	1.2e-116	58.3
WP_001295593.1\|2144217_2144652_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
WP_001143784.1\|2145232_2145874_-	DUF1076 domain-containing protein	B6DZC0	Enterobacteria_phage	6.8e-109	100.0
WP_001443810.1\|2145955_2146585_-	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	1.3e-77	92.2
WP_001131659.1\|2146657_2147233_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	5.3e-89	88.4
WP_001023992.1\|2147345_2147615_-\|tail	phage tail protein	A0A0P0ZCV7	Stx2-converting_phage	4.2e-44	95.5
WP_000268965.1\|2147616_2148930_-\|tail	tail fiber protein	A0A0P0ZCC1	Stx2-converting_phage	7.9e-80	97.9
WP_001230550.1\|2148994_2149594_-	Ail/Lom family outer membrane beta-barrel protein	B6ETG5	Enterobacteria_phage	3.0e-111	100.0
WP_000515042.1\|2149664_2153162_-	host specificity protein J	A0A0P0ZEQ8	Stx2-converting_phage	0.0e+00	94.3
WP_000649829.1\|2153295_2153823_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-59	60.5
WP_064732755.1\|2154013_2154646_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	3.4e-97	90.4
WP_000194763.1\|2154591_2155335_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	5.4e-150	99.2
WP_001152159.1\|2155345_2156044_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.3e-129	97.4
WP_000807964.1\|2156043_2156385_-\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
WP_000212770.1\|2156377_2159620_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	99.0
WP_001453698.1\|2159672_2159882_-	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_001030060.1\|2159977_2160352_-\|tail	tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	3.0e-64	99.2
WP_001275480.1\|2160357_2161074_-\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	1.4e-126	97.9
WP_000133393.1\|2161142_2161487_-	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_000573391.1\|2161483_2161930_-	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_001007911.1\|2161926_2162277_-\|head	phage head closure protein	H6WZL5	Escherichia_phage	2.0e-59	100.0
WP_000125984.1\|2162286_2162613_-\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
WP_001063025.1\|2164977_2165199_-	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
WP_110826213.1\|2165243_2167181_-\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.5
WP_097638330.1\|2167244_2168906_-\|terminase	terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	98.7
WP_000958398.1\|2168902_2169466_-\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	7.3e-83	94.1
WP_000829192.1\|2169754_2170120_-	HNH endonuclease	B6ETE5	Enterobacteria_phage	1.6e-62	96.7
WP_000095744.1\|2170161_2170362_+	YlcI/YnfO family protein	H6WZK6	Escherichia_phage	1.3e-29	97.0
WP_000828070.1\|2170493_2170820_-	TonB family protein	H6WZK5	Escherichia_phage	6.3e-55	98.1
WP_012817877.1\|2171220_2171406_-	membrane protein	A0A1U9AJA4	Stx1_converting_phage	4.0e-22	85.2
WP_001280923.1\|2171628_2171760_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	3.8e-11	93.0
WP_000285960.1\|2171854_2172031_-	phage antirepressor	Q5MBW0	Stx1-converting_phage	3.3e-26	98.3
WP_085948178.1\|2172107_2173320_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001344811.1\|2173323_2173863_-	ant domain protein	Q5MBW0	Stx1-converting_phage	3.0e-86	99.4
WP_000992086.1\|2174136_2174670_-	lysozyme	B6DZ92	Enterobacteria_phage	1.3e-100	97.7
WP_000731221.1\|2174720_2175065_-	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	1.8e-55	95.6
WP_000284522.1\|2175069_2175285_-\|holin	holin	Q6H9V8	Enterobacteria_phage	1.3e-32	97.2
WP_000143077.1\|2175434_2177288_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.3
WP_000466957.1\|2177858_2178290_-	tellurite resistance TerB family protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
WP_000640158.1\|2178851_2179406_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.0e-68	69.1
WP_000247761.1\|2179402_2179693_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-47	87.5
WP_000940319.1\|2179692_2180292_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.1e-105	92.0
WP_000138556.1\|2180791_2182183_+	ATPase	NA	NA	NA	NA
WP_000016656.1\|2182182_2183172_+	hypothetical protein	NA	NA	NA	NA
WP_001100703.1\|2183139_2184291_-	DNA cytosine methyltransferase	Q8JKX6	Natrialba_phage	1.0e-22	36.9
WP_000365100.1\|2184722_2184968_-	hypothetical protein	Q9G078	Enterobacteria_phage	5.9e-13	70.7
WP_000208018.1\|2185046_2185208_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	3.2e-15	89.4
WP_000224233.1\|2185218_2185482_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_000935420.1\|2185733_2185946_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	5.8e-33	94.3
WP_001141110.1\|2186051_2186474_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	3.1e-62	88.5
WP_000450712.1\|2186489_2187251_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	7.0e-121	90.5
WP_000788980.1\|2187273_2188020_-	ATP-binding protein	V5UQI5	Shigella_phage	5.6e-115	81.3
WP_001304174.1\|2188026_2188815_-	hypothetical protein	G9L6A8	Escherichia_phage	2.0e-41	64.3
WP_000693803.1\|2188892_2189315_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.3e-68	92.9
WP_001072342.1\|2189311_2189566_-	hypothetical protein	A0A2I6PIE5	Escherichia_phage	1.3e-18	61.6
WP_000233319.1\|2189645_2190065_+	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	5.5e-19	46.5
WP_001326317.1\|2190307_2190487_+	hypothetical protein	NA	NA	NA	NA
WP_001169151.1\|2190497_2190653_+	YdaF family protein	M4QQ57	Salicola_phage	6.1e-08	55.3
WP_001312793.1\|2190649_2191138_-	superinfection exclusion protein B	NA	NA	NA	NA
WP_000560223.1\|2191579_2191801_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_001352098.1\|2191800_2191971_+	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
WP_001344816.1\|2192045_2192321_+	hypothetical protein	A0A0U2QW85	Escherichia_phage	4.0e-42	95.6
WP_000105140.1\|2192422_2195023_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	6.1e-249	63.5
WP_000166313.1\|2195015_2195825_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	4.0e-106	71.5
WP_001443846.1\|2195880_2196030_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	2.5e-22	95.9
WP_001302840.1\|2196067_2196256_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
WP_000079604.1\|2196355_2196571_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000040839.1\|2196572_2197808_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	3.8e-241	99.5
WP_001157407.1\|2197859_2198795_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
WP_000123745.1\|2198923_2200297_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_001296046.1\|2200326_2200500_-	hypothetical protein	NA	NA	NA	NA
WP_000387388.1\|2200774_2201758_-	zinc transporter ZntB	NA	NA	NA	NA
WP_000628065.1\|2202012_2203245_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
2202378:2202394	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2263629 : 2337958

Enterobacteria_phage(41.82%)

protease,holin,terminase,portal,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085948178.1\|2263629_2264842_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001288368.1\|2266873_2267047_+	hypothetical protein	NA	NA	NA	NA
WP_001088625.1\|2267136_2267886_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000498253.1\|2268154_2268373_+	osmotically-inducible lipoprotein OsmB	NA	NA	NA	NA
WP_001295580.1\|2268498_2268825_-	stress response translation initiation inhibitor YciH	NA	NA	NA	NA
WP_000176278.1\|2268824_2269562_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_000891353.1\|2269753_2270923_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_000876286.1\|2270929_2271238_-	lipopolysaccharide assembly protein LapA	NA	NA	NA	NA
WP_001256539.1\|2271386_2272151_-	phosphatidylglycerophosphatase B	NA	NA	NA	NA
WP_001176295.1\|2272320_2272911_+	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	7.7e-43	48.9
WP_000099519.1\|2272974_2275650_-	aconitate hydratase AcnA	NA	NA	NA	NA
WP_001310756.1\|2275813_2275909_-	hypothetical protein	NA	NA	NA	NA
WP_001297116.1\|2276022_2276190_-	hypothetical protein	NA	NA	NA	NA
WP_000908596.1\|2276192_2276357_-	YmiA family putative membrane protein	NA	NA	NA	NA
WP_000776253.1\|2276651_2277626_-	HTH-type transcriptional regulator CysB	NA	NA	NA	NA
WP_001297122.1\|2277835_2280433_-	type I DNA topoisomerase	A0A2K9L1Q2	Tupanvirus	1.7e-86	34.7
WP_001031530.1\|2280812_2281064_+	YciN family protein	NA	NA	NA	NA
WP_000422045.1\|2281099_2282149_-\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5
WP_000559281.1\|2282368_2283127_+	YciK family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	4.4e-06	24.5
WP_001278906.1\|2283123_2283714_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_001291216.1\|2283753_2284626_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_001295575.1\|2284726_2285347_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_001285661.1\|2285343_2286225_-	5'-3' exoribonuclease	NA	NA	NA	NA
WP_001700591.1\|2286362_2286407_+	trp operon leader peptide	NA	NA	NA	NA
WP_001194584.1\|2286498_2288061_+	anthranilate synthase component I	NA	NA	NA	NA
WP_000763511.1\|2288060_2289656_+	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
WP_001344826.1\|2289659_2291018_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	8.6e-37	40.7
WP_000209520.1\|2291029_2292223_+	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_000443067.1\|2292222_2293029_+	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_000807651.1\|2293409_2293589_+	general stress protein	NA	NA	NA	NA
WP_001056491.1\|2293674_2294175_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_001079509.1\|2294220_2294727_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_000692020.1\|2295763_2296354_-	protein kinase	NA	NA	NA	NA
WP_085948178.1\|2297500_2298713_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_110826214.1\|2298679_2298793_+	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	1.7e-07	87.1
WP_001023476.1\|2298802_2299072_-\|tail	phage tail protein	A0A1U9AJC2	Stx1_converting_phage	2.7e-43	97.8
WP_000279057.1\|2299073_2300387_-\|tail	tail fiber protein	A0A0P0ZCC1	Stx2-converting_phage	3.7e-77	97.0
WP_001230455.1\|2300451_2301051_-	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	8.8e-111	99.0
WP_000514851.1\|2301118_2304595_-	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	96.7
WP_122996286.1\|2304831_2305464_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.0e-104	97.6
WP_001344666.1\|2305409_2306153_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.5e-147	98.4
WP_000847298.1\|2306860_2307190_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_000918237.1\|2307186_2309832_-\|tail	phage tail tape measure protein	Q9EYE1	Enterobacteria_phage	0.0e+00	99.4
WP_000532073.1\|2309875_2310184_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	1.3e-54	100.0
WP_000479043.1\|2310210_2310633_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	5.1e-73	100.0
WP_000235090.1\|2310646_2311399_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
WP_001444799.1\|2311406_2311697_-\|tail	tail protein	Q9EYD7	Enterobacteria_phage	2.1e-49	99.0
WP_085948178.1\|2311751_2312964_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000682711.1\|2312967_2313114_-	hypothetical protein	Q687G0	Enterobacteria_phage	3.5e-21	100.0
WP_000974958.1\|2313126_2313750_-\|tail	phage tail protein	Q8VNN3	Enterobacteria_phage	8.9e-106	100.0
WP_001281348.1\|2313752_2314034_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	2.1e-46	100.0
WP_001097065.1\|2314026_2314353_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001114424.1\|2314440_2316465_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.8
WP_000974564.1\|2316409_2317912_-\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
WP_000102413.1\|2317911_2318124_-	hypothetical protein	Q687G1	Enterobacteria_phage	2.3e-29	98.6
WP_001077625.1\|2318120_2320244_-\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	0.0e+00	100.0
WP_000373407.1\|2320240_2320717_-	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
WP_012578895.1\|2321192_2321378_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	2.7e-18	98.4
WP_000992150.1\|2321896_2322430_-	lysozyme	B6DZ92	Enterobacteria_phage	2.1e-100	97.2
WP_136833288.1\|2322466_2322820_-	hypothetical protein	Q08JA0	Stx2-converting_phage	5.3e-47	80.5
WP_032350783.1\|2322806_2323022_-	hypothetical protein	NA	NA	NA	NA
WP_001072901.1\|2323025_2323241_-\|holin	holin	A0A2R2Z340	Escherichia_phage	1.2e-33	100.0
WP_001290214.1\|2323318_2323564_-	DUF826 domain-containing protein	A0A088CE63	Shigella_phage	3.2e-19	98.8
WP_000143458.1\|2323604_2323784_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_000142980.1\|2323921_2325868_-	DUF1737 domain-containing protein	Q9EYC8	Enterobacteria_phage	0.0e+00	99.1
WP_000483498.1\|2326462_2327521_-	site-specific DNA-methyltransferase	S5MDR0	Escherichia_phage	1.7e-205	98.0
WP_000917735.1\|2327671_2327869_-	hypothetical protein	S5MQK8	Escherichia_phage	1.8e-28	98.5
WP_000762902.1\|2328095_2328917_-	hypothetical protein	K7P7B9	Enterobacteria_phage	2.8e-83	61.9
WP_000904137.1\|2328913_2329288_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.4e-34	62.7
WP_001344904.1\|2329300_2330350_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.0e-109	54.3
WP_001447497.1\|2330351_2330630_-	hypothetical protein	I6PCV7	Cronobacter_phage	6.9e-10	46.9
WP_001260976.1\|2330765_2331023_+	type II toxin-antitoxin system ParD family antitoxin	A0A0N7C055	Escherichia_phage	6.6e-31	88.0
WP_000220602.1\|2331028_2331328_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2R2Z2Y1	Escherichia_phage	1.6e-49	96.0
WP_000610381.1\|2331533_2331887_-	DUF551 domain-containing protein	Q9EY98	Enterobacteria_phage	5.5e-36	65.0
WP_000137950.1\|2331883_2332255_-	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	2.7e-49	78.9
WP_000403788.1\|2332350_2332707_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	6.7e-58	97.5
WP_001209477.1\|2332684_2333146_-	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	6.9e-39	95.2
WP_001444682.1\|2333142_2333439_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	4.4e-47	93.7
WP_072127369.1\|2333435_2333717_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.6e-30	75.8
WP_000075578.1\|2333749_2334286_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	4.1e-59	71.9
WP_085948178.1\|2334349_2335563_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000268365.1\|2337409_2337958_-	recombinase family protein	G8I4U3	Mycobacterium_phage	2.7e-21	36.1

DBSCAN-SWA_11

2439174 : 2510802

Escherichia_phage(32.26%)

head,holin,terminase,portal,tRNA,integrase,transposase,capsid,tail

attL 2483730:2483789|attR 2516402:2517712

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001297484.1\|2439174_2440281_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_001297479.1\|2440316_2440958_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000423729.1\|2440961_2442332_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.2e-108	44.9
WP_001265481.1\|2442499_2443171_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000735412.1\|2443170_2444631_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_000456506.1\|2444706_2445828_+	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000359442.1\|2445973_2447203_-	peptidase T	NA	NA	NA	NA
WP_000531601.1\|2447452_2448589_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
WP_000799400.1\|2448572_2449436_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000938117.1\|2449799_2451161_+	type III secretion system effector EspK	Q9MBM1	Phage_Gifsy-1	4.0e-50	28.9
WP_001303921.1\|2451221_2451497_+	hypothetical protein	NA	NA	NA	NA
WP_001301834.1\|2451576_2451702_-	hypothetical protein	Q8HAB2	Salmonella_phage	8.7e-05	58.3
WP_000145590.1\|2451724_2452303_-\|transposase	transposase	NA	NA	NA	NA
WP_001369471.1\|2452471_2455873_-	type III secretion system effector EspN	A0A0N7KZG3	Stx2-converting_phage	1.0e-219	39.2
WP_001301673.1\|2456463_2458812_-	type III secretion system effector E3 ubiquitin ligase NleL	NA	NA	NA	NA
WP_115801847.1\|2458831_2458921_-	hypothetical protein	NA	NA	NA	NA
WP_001023356.1\|2459027_2459297_-\|tail	phage tail protein	A0A2R2Z347	Escherichia_phage	2.4e-44	98.9
WP_071925134.1\|2459298_2460621_-\|tail	phage tail protein	Q687E6	Enterobacteria_phage	3.7e-77	99.3
WP_001230459.1\|2460685_2461285_-	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	8.0e-112	100.0
WP_000514853.1\|2461351_2464831_-	host specificity protein J	A0A0P0ZDT4	Stx2-converting_phage	0.0e+00	97.4
WP_122996286.1\|2465077_2465710_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.0e-104	97.6
WP_001369128.1\|2465655_2466399_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	3.3e-147	98.0
WP_001152113.1\|2466404_2467103_-\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	4.7e-132	99.1
WP_000847298.1\|2467102_2467432_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_000081781.1\|2467428_2470041_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	96.0
WP_000533440.1\|2470021_2470435_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	3.2e-43	83.2
WP_000479045.1\|2470461_2470884_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	1.7e-71	98.6
WP_000235098.1\|2470897_2471650_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	4.9e-135	99.2
WP_000683079.1\|2471657_2472053_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000974980.1\|2472049_2472583_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.6e-58	66.7
WP_001204554.1\|2472598_2472952_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.5e-41	70.1
WP_000201501.1\|2472944_2473328_-	DNA-packaging protein FI	NA	NA	NA	NA
WP_000522591.1\|2473379_2474408_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.6e-112	61.0
WP_000256823.1\|2474465_2474813_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
WP_001253979.1\|2474849_2476355_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.0e-99	53.5
WP_001369121.1\|2476344_2477937_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	7.1e-184	60.9
WP_000259002.1\|2477933_2478140_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_001426431.1\|2478123_2480052_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.6e-262	66.4
WP_001426432.1\|2480023_2480530_-	DNA-packaging protein	O64316	Escherichia_phage	7.4e-34	47.3
WP_001444498.1\|2480956_2481181_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	1.3e-19	90.6
WP_001302717.1\|2481262_2481577_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_012817896.1\|2482104_2482290_-	membrane protein	A0A1U9AJA4	Stx1_converting_phage	4.0e-22	83.6
WP_001092858.1\|2482807_2483341_-	lysozyme	Q6H9V6	Enterobacteria_phage	1.9e-101	96.0
WP_000638258.1\|2483383_2483788_-	hypothetical protein	Q08JA0	Stx2-converting_phage	8.2e-52	83.5
2483730:2483789	attL	NA	NA	NA	NA
WP_085948178.1\|2483771_2484985_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000284516.1\|2485216_2485432_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	7.7e-33	97.2
WP_001290231.1\|2485508_2485781_-	DUF826 domain-containing protein	A0A0P0ZBB8	Stx2-converting_phage	2.2e-21	100.0
WP_000143458.1\|2485821_2486001_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_061104286.1\|2486135_2488073_-	SASA family carbohydrate esterase	A0A0P0ZDW4	Stx2-converting_phage	0.0e+00	96.9
WP_000466957.1\|2488551_2488983_-	tellurite resistance TerB family protein	H6WZJ6	Escherichia_phage	3.3e-67	97.2
WP_000422741.1\|2489070_2489496_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|2489492_2489843_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000080194.1\|2489873_2491487_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.4e-181	64.0
WP_000301789.1\|2491972_2492686_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000917764.1\|2492820_2493018_-	hypothetical protein	S5MQK8	Escherichia_phage	6.8e-28	98.5
WP_000640033.1\|2493241_2493796_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	8.0e-66	67.4
WP_001217447.1\|2493804_2494164_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.0e-37	63.5
WP_001265229.1\|2494176_2495226_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.2e-110	54.6
WP_000191872.1\|2495227_2495500_-	hypothetical protein	S4TNP0	Salmonella_phage	1.1e-12	53.0
WP_000756596.1\|2495621_2495966_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	6.1e-56	99.1
WP_000935259.1\|2496085_2496298_-	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	6.0e-30	100.0
WP_000104474.1\|2496531_2497089_-	DUF551 domain-containing protein	A0A0N7KZV3	Escherichia_phage	2.8e-34	41.7
WP_000683609.1\|2497090_2497309_-	DUF4014 family protein	A0A2R2Z311	Escherichia_phage	2.3e-21	72.2
WP_000034815.1\|2497436_2497748_-	hypothetical protein	A0A0U2QV73	Escherichia_phage	1.6e-55	91.3
WP_000699809.1\|2497740_2497968_-	hypothetical protein	A0A1B5FPG2	Escherichia_phage	5.1e-11	49.3
WP_000603384.1\|2497964_2498246_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	1.0e-29	73.6
WP_000450617.1\|2498278_2498995_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.1e-71	62.6
WP_000788760.1\|2499016_2499763_-	ATP-binding protein	A0A088CBP4	Shigella_phage	3.6e-114	83.2
WP_001262366.1\|2499769_2500840_-	hypothetical protein	A0A088CD36	Shigella_phage	1.7e-64	65.7
WP_000693883.1\|2500911_2501337_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000391948.1\|2501320_2501602_-	hypothetical protein	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
WP_000362152.1\|2501701_2502121_+	hypothetical protein	K7PK07	Enterobacteria_phage	4.0e-25	65.1
WP_001345283.1\|2502386_2502539_+	DUF1391 family protein	M4QQ57	Salicola_phage	1.7e-07	53.2
WP_000394546.1\|2502550_2503189_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-07	41.9
WP_001133037.1\|2503189_2503399_-	hypothetical protein	NA	NA	NA	NA
WP_000449192.1\|2503969_2504158_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001090200.1\|2504154_2504346_+	DUF1482 family protein	NA	NA	NA	NA
WP_078163380.1\|2504438_2505923_+	exonuclease	NA	NA	NA	NA
WP_085948178.1\|2505928_2507141_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001300307.1\|2508374_2509172_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001345280.1\|2509527_2510802_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.4e-76	40.9
2516402:2517712	attR	NA	NA	NA	NA

DBSCAN-SWA_12

2515205 : 2582953

Enterobacteria_phage(46.38%)

head,holin,coat,lysis,terminase,portal,integrase,transposase,tail

attL 2517131:2517145|attR 2584632:2584646

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085948178.1\|2515205_2516418_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
2517131:2517145	attL	NA	NA	NA	NA
WP_001060244.1\|2518957_2520412_+	AMP nucleosidase	NA	NA	NA	NA
WP_000532913.1\|2520754_2521471_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001011007.1\|2523860_2524811_-	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_001011461.1\|2524912_2525830_-	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
WP_000986337.1\|2526287_2527223_-	L,D-transpeptidase	NA	NA	NA	NA
WP_001193804.1\|2527284_2528364_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_001297350.1\|2528375_2529119_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_096861628.1\|2531959_2532721_+	ferredoxin reductase	NA	NA	NA	NA
WP_000775497.1\|2532856_2533540_+	hypothetical protein	NA	NA	NA	NA
WP_000846711.1\|2533555_2533966_+	hypothetical protein	NA	NA	NA	NA
WP_001234505.1\|2534186_2535008_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	1.0e-45	38.1
WP_000860076.1\|2535089_2535569_+	antirestriction protein	A0A2D0W9W4	Bordetella_phage	8.9e-13	33.8
WP_001186773.1\|2535584_2536061_+	RadC family protein	NA	NA	NA	NA
WP_000692345.1\|2536129_2536351_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001285585.1\|2536424_2536793_+	type IV toxin-antitoxin system toxin CbtA	NA	NA	NA	NA
WP_000988599.1\|2537251_2537446_+	hypothetical protein	NA	NA	NA	NA
WP_001161660.1\|2537458_2537572_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001016348.1\|2538060_2538243_+	hypothetical protein	NA	NA	NA	NA
WP_000450409.1\|2538343_2538673_-	DUF496 family protein	NA	NA	NA	NA
WP_001105393.1\|2540101_2540575_-	DNA gyrase inhibitor SbmC	NA	NA	NA	NA
WP_001369224.1\|2540689_2541856_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	7.2e-226	98.5
WP_001345271.1\|2542709_2543618_+	acyltransferase	NA	NA	NA	NA
WP_000129903.1\|2543658_2545596_-\|tail	tail spike protein	A0A140G5Z9	Enterobacteria_phage	1.9e-271	88.9
WP_001084290.1\|2545774_2546710_-	phage antirepressor Ant	A0A2H4FRZ6	Salmonella_phage	2.2e-177	99.0
WP_000677939.1\|2546778_2546940_-	Arc family DNA-binding protein	A8CG91	Salmonella_phage	2.7e-22	98.1
WP_000090241.1\|2547030_2547282_+	Arc family DNA-binding protein	B9UDL4	Salmonella_phage	1.3e-39	98.8
WP_000821222.1\|2547298_2547718_-	hypothetical protein	B9UDL3	Salmonella_phage	1.5e-72	97.8
WP_001334102.1\|2547855_2548224_+	hypothetical protein	I6S5X4	Salmonella_phage	2.9e-64	98.4
WP_001345269.1\|2548248_2550087_-	hypothetical protein	A0A192Y934	Salmonella_phage	4.7e-248	74.6
WP_000382045.1\|2550086_2551493_-	phage DNA ejection protein	I6RSG0	Salmonella_phage	1.2e-126	55.2
WP_000964882.1\|2551502_2552195_-	DNA transfer protein	G5DA80	Enterobacteria_phage	9.2e-112	100.0
WP_000627632.1\|2552197_2552653_-	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	1.8e-87	100.0
WP_000785561.1\|2552652_2553354_-	hypothetical protein	A5VW68	Enterobacteria_phage	5.1e-118	97.0
WP_000947776.1\|2553346_2553880_-	endodeoxyribonuclease	A0A1V0E5R7	Salmonella_phage	1.1e-35	48.3
WP_001122404.1\|2553901_2555320_-	Packaged DNA stabilization protein gp10	A0A088CQ70	Enterobacteria_phage	5.3e-255	91.5
WP_001140510.1\|2555329_2555791_-\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
WP_001444886.1\|2555771_2555960_-	hypothetical protein	A0A088CPR7	Enterobacteria_phage	3.2e-27	98.4
WP_000013275.1\|2556001_2557255_-\|coat	coat protein	A5VW72	Enterobacteria_phage	1.7e-233	98.6
WP_000372576.1\|2557273_2558167_-	scaffold protein	A0A088CPT0	Enterobacteria_phage	3.7e-129	98.7
WP_032353816.1\|2558257_2560456_-\|portal	portal protein	A0A088CQ69	Enterobacteria_phage	0.0e+00	99.3
WP_000200766.1\|2560457_2561873_-\|terminase	PBSX family phage terminase large subunit	A5VW75	Enterobacteria_phage	1.2e-278	99.8
WP_001436504.1\|2561869_2562292_-	hypothetical protein	Q716H4	Shigella_phage	7.2e-75	100.0
WP_000205033.1\|2562315_2562495_-	hypothetical protein	A0A088CPS9	Enterobacteria_phage	2.1e-23	93.2
WP_000139136.1\|2562504_2562792_-	hypothetical protein	I1TQD4	Pseudomonas_phage	1.6e-06	33.3
WP_000807789.1\|2562795_2563038_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	3.7e-36	100.0
WP_000999693.1\|2563141_2563522_-	hypothetical protein	Q716B1	Shigella_phage	6.7e-64	96.8
WP_001059339.1\|2563753_2564278_-	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	4.5e-87	94.2
WP_000092296.1\|2564478_2564916_-\|lysis	lysis protein	K7P710	Enterobacteria_phage	1.1e-70	97.2
WP_000229402.1\|2564912_2565389_-	glycoside hydrolase family protein	A5VW81	Enterobacteria_phage	4.9e-88	98.7
WP_000783734.1\|2565372_2565696_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_000512813.1\|2566157_2566676_-	DUF1133 family protein	Q716B8	Shigella_phage	5.0e-94	97.7
WP_001271131.1\|2566666_2567338_-	serine/threonine protein phosphatase	K7P7K6	Enterobacteria_phage	2.1e-129	98.2
WP_000144614.1\|2567315_2567522_-	protein ninH	Q716C0	Shigella_phage	7.3e-33	100.0
WP_001223932.1\|2567518_2568121_-	recombination protein NinG	A0A1U9AJF8	Stx1_converting_phage	9.8e-94	96.6
WP_001108084.1\|2568095_2568662_-	endonuclease	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
WP_000566872.1\|2568654_2568825_-	protein ninF	K7PM86	Enterobacteria_phage	1.2e-25	100.0
WP_001254257.1\|2568821_2569004_-	NinE family protein	A0A0P0ZC71	Stx2-converting_phage	4.3e-29	100.0
WP_000153271.1\|2569000_2569528_-	phage N-6-adenine-methyltransferase	K7PJZ4	Enterobacterial_phage	3.6e-100	99.4
WP_001303571.1\|2569524_2569971_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	2.4e-81	100.0
WP_001449504.1\|2569927_2570164_-	restriction alleviation protein, Lar family	Q687G3	Enterobacteria_phage	9.3e-40	100.0
WP_000103678.1\|2570174_2570390_-	hypothetical protein	A0A0N7KZ98	Stx2-converting_phage	7.7e-33	100.0
WP_001000130.1\|2570522_2570801_-	hypothetical protein	Q9EYB9	Enterobacteria_phage	4.4e-49	100.0
WP_001036037.1\|2570870_2571140_-	hypothetical protein	Q687G4	Enterobacteria_phage	8.4e-45	100.0
WP_000131499.1\|2571139_2572576_-	AAA family ATPase	Q8VNP7	Enterobacteria_phage	1.4e-274	99.8
WP_024222284.1\|2572565_2573465_-	hypothetical protein	A0A0N7C1Z7	Escherichia_phage	3.0e-163	98.7
WP_000166207.1\|2573457_2573604_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_000438527.1\|2573636_2573933_-	hypothetical protein	A4KWW1	Enterobacteria_phage	1.5e-47	99.0
WP_000067727.1\|2574074_2574290_-	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
WP_016242500.1\|2574365_2575061_+	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	8.3e-129	96.1
WP_000088201.1\|2575406_2575679_+	hypothetical protein	A0A0N7C217	Escherichia_phage	7.4e-41	98.9
WP_000214161.1\|2575807_2576008_+	Restriction inhibitor protein ral	A0A0K2FJE6	Enterobacteria_phage	6.0e-32	97.0
WP_000167579.1\|2576073_2576544_+	hypothetical protein	G9L670	Escherichia_phage	8.2e-88	99.4
WP_000050554.1\|2576984_2577155_+	hypothetical protein	K7PJW0	Enterobacteria_phage	3.0e-24	100.0
WP_000031374.1\|2577165_2577771_+	ERF family protein	K7P6W7	Enterobacteria_phage	2.1e-107	99.5
WP_000951320.1\|2577770_2578154_+	hypothetical protein	K7P6P8	Enterobacteria_phage	1.9e-66	98.4
WP_001111307.1\|2578177_2578471_+	DUF2856 family protein	K7P7E6	Enterobacteria_phage	3.2e-50	97.9
WP_032353655.1\|2578481_2578649_+	DUF2737 family protein	Q716F2	Shigella_phage	1.4e-21	94.5
WP_000109677.1\|2578645_2578945_+	hypothetical protein	A5VWB2	Enterobacteria_phage	1.1e-56	97.0
WP_001033097.1\|2578946_2579501_+	ead/Ea22-like family protein	Q76H45	Enterobacteria_phage	1.0e-57	87.7
WP_000797282.1\|2579673_2579862_+	hypothetical protein	A0A1I9LJM4	Stx_converting_phage	1.2e-29	95.2
WP_000951710.1\|2579863_2580073_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.8e-34	94.2
WP_000208130.1\|2580069_2580873_+	hypothetical protein	Q8HAA7	Salmonella_phage	2.2e-48	50.6
WP_000002108.1\|2580865_2581150_+	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	9.1e-50	98.9
WP_000227131.1\|2581221_2581521_+	hypothetical protein	Q9G076	Enterobacteria_phage	3.0e-51	97.0
WP_000132739.1\|2581602_2581794_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	1.7e-31	100.0
WP_001007947.1\|2581774_2582953_-\|integrase	site-specific integrase	A0A0P0ZDN8	Stx2-converting_phage	1.8e-232	100.0
2584632:2584646	attR	NA	NA	NA	NA

DBSCAN-SWA_13

2777396 : 2846261

Enterobacteria_phage(20.0%)

protease,holin,lysis,terminase,integrase,transposase,capsid

attL 2815339:2815374|attR 2847201:2847236

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000101907.1\|2777396_2778638_+\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	1.6e-98	43.1
WP_000387403.1\|2779134_2779341_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001345228.1\|2779295_2781104_+	host cell division inhibitor Icd-like protein	A0A2H4JGN8	uncultured_Caudovirales_phage	2.9e-08	41.1
WP_024174018.1\|2781319_2781766_+	hypothetical protein	NA	NA	NA	NA
WP_001205000.1\|2781758_2781992_+	hypothetical protein	NA	NA	NA	NA
WP_000770163.1\|2781997_2782297_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000833625.1\|2782293_2783694_+	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.6e-115	60.1
WP_001080641.1\|2783895_2784141_+	hypothetical protein	NA	NA	NA	NA
WP_000391151.1\|2784271_2784466_+	hypothetical protein	NA	NA	NA	NA
WP_001018604.1\|2784469_2784631_+	hypothetical protein	NA	NA	NA	NA
WP_001229488.1\|2784758_2785247_+\|terminase	terminase small subunit	A0A0P0ZCQ9	Stx2-converting_phage	3.9e-24	41.7
WP_001369202.1\|2785409_2786333_+\|capsid	phage capsid protein	A0A0R6PHC6	Moraxella_phage	1.2e-13	24.9
WP_001113637.1\|2789709_2790357_+	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_001211568.1\|2790391_2791444_-	cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH	NA	NA	NA	NA
WP_000824439.1\|2791440_2791998_-	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_000982426.1\|2791994_2793938_-	cytochrome c-type biogenesis heme lyase CcmF	NA	NA	NA	NA
WP_001026418.1\|2793934_2794414_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_000186540.1\|2794410_2794620_-	heme exporter protein CcmD	NA	NA	NA	NA
WP_001295447.1\|2794616_2795354_-	heme exporter protein CcmC	NA	NA	NA	NA
WP_000971722.1\|2795395_2796058_-	heme exporter protein CcmB	NA	NA	NA	NA
WP_000888560.1\|2796054_2796672_-	cytochrome c biogenesis heme-transporting ATPase CcmA	G3M9Y6	Bacillus_virus	1.9e-12	25.5
WP_000528376.1\|2796690_2797293_-	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000835176.1\|2797302_2797752_-	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_000013506.1\|2797748_2798612_-	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000091291.1\|2798598_2799294_-	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000778069.1\|2799300_2801787_-	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_000557378.1\|2801783_2802047_-	chaperone NapD	NA	NA	NA	NA
WP_000686723.1\|2802036_2802531_-	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_000849214.1\|2802939_2803428_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_000758043.1\|2803576_2805223_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_000422230.1\|2805440_2807084_-	microcin J25 efflux ABC transporter YojI	W8CYL7	Bacillus_phage	9.5e-14	24.0
WP_000884922.1\|2807159_2807810_-	DNA oxidative demethylase AlkB	A0A2K9L3R7	Tupanvirus	1.4e-05	31.7
WP_000786386.1\|2807809_2808874_-	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.8e-18	50.5
WP_000406116.1\|2808947_2810003_-	FAD:protein FMN transferase ApbE	NA	NA	NA	NA
WP_000865576.1\|2810114_2811206_-	porin OmpC	Q1MVN1	Enterobacteria_phage	9.4e-119	60.1
WP_001249151.1\|2811944_2814617_+	phosphotransferase RcsD	NA	NA	NA	NA
WP_001061917.1\|2814633_2815284_+	transcriptional regulator RcsB	NA	NA	NA	NA
2815339:2815374	attL	NA	NA	NA	NA
WP_000876014.1\|2815483_2818333_-	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	1.4e-41	27.2
WP_001225855.1\|2818607_2819384_-	YfaP family protein	NA	NA	NA	NA
WP_001104541.1\|2819388_2821038_-	DUF2300 domain-containing protein	NA	NA	NA	NA
WP_122993426.1\|2821038_2825433_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_001025665.1\|2826234_2827557_+	type III secretion system effector NleA	H6WZN2	Escherichia_phage	9.7e-227	85.5
WP_072145680.1\|2828250_2828889_-	T3SS effector NleG family protein	B6DZC0	Enterobacteria_phage	2.4e-34	43.0
WP_085948178.1\|2828926_2830139_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000881316.1\|2830179_2830704_-	hypothetical protein	A0A0N7CEE8	Salmonella_phage	1.2e-84	89.7
WP_000092247.1\|2830853_2831291_-\|lysis	lysis protein	A0A0P0ZBQ9	Stx2-converting_phage	5.0e-71	97.9
WP_000075144.1\|2831287_2831785_-	lysozyme RrrD	A0A1B5FP97	Escherichia_phage	1.9e-90	98.2
WP_000284524.1\|2831784_2832000_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
WP_012578864.1\|2832142_2832541_+	hypothetical protein	H6WZJ8	Escherichia_phage	6.9e-11	83.3
WP_000499454.1\|2832621_2832780_-	DUF3927 family protein	NA	NA	NA	NA
WP_001235460.1\|2833872_2834496_-	antitermination protein	K7PM87	Enterobacteria_phage	9.8e-113	98.6
WP_001028854.1\|2834492_2835158_-	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	5.0e-131	99.5
WP_001223927.1\|2835154_2835757_-	recombination protein NinG	A0A1U9AJF8	Stx1_converting_phage	1.6e-91	94.6
WP_001108084.1\|2835731_2836298_-	endonuclease	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
WP_042352449.1\|2836821_2837754_+	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	6.1e-151	99.7
WP_001345214.1\|2837792_2838620_+	hypothetical protein	A0A1U9AJG3	Stx1_converting_phage	1.6e-150	99.6
WP_001254228.1\|2839123_2839306_-	NinE family protein	A0A1U9AJF6	Stx1_converting_phage	1.1e-29	100.0
WP_001281192.1\|2839462_2839807_+	hypothetical protein	K7PJY7	Enterobacterial_phage	5.3e-60	100.0
WP_001444001.1\|2839912_2840131_+	excisionase	K7PKU2	Enterobacteria_phage	2.4e-34	98.6
WP_000533670.1\|2840108_2841179_+\|integrase	tyrosine-type recombinase/integrase	K7PHK0	Enterobacteria_phage	1.1e-196	98.0
WP_001215757.1\|2841173_2841800_-	DUF1175 domain-containing protein	NA	NA	NA	NA
WP_000012296.1\|2841796_2843485_-	DUF2138 domain-containing protein	NA	NA	NA	NA
WP_001281242.1\|2843633_2846261_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	8.1e-92	30.4
2847201:2847236	attR	NA	NA	NA	NA

DBSCAN-SWA_14

2934936 : 3027007

106

Escherichia_phage(38.75%)

protease,bacteriocin,lysis,holin,terminase,portal,tRNA,integrase,transposase,capsid,tail

attL 2966488:2966512|attR 3027202:3027226

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001283576.1\|2934936_2935749_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289165.1\|2935748_2936762_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000699121.1\|2936827_2937964_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	5.9e-23	29.1
WP_000615813.1\|2938062_2939058_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127749.1\|2939054_2940233_-	MFS transporter	NA	NA	NA	NA
WP_000817178.1\|2940516_2941737_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000683806.1\|2941895_2943902_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559764.1\|2944022_2944301_-	YfcL family protein	NA	NA	NA	NA
WP_001089232.1\|2944334_2944883_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000447359.1\|2944882_2945692_-	TSUP family transporter	NA	NA	NA	NA
WP_001043815.1\|2945691_2946516_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_000918470.1\|2946519_2947605_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	48.4
WP_001295704.1\|2947639_2948572_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730806.1\|2948737_2949289_+	endonuclease SmrB	NA	NA	NA	NA
WP_001315753.1\|2949361_2950213_-	DUF2544 domain-containing protein	NA	NA	NA	NA
WP_000844750.1\|2950214_2950754_-	fimbrial protein	NA	NA	NA	NA
WP_000714139.1\|2950750_2951239_-	fimbrial protein	NA	NA	NA	NA
WP_000018471.1\|2951235_2951745_-	fimbrial protein	NA	NA	NA	NA
WP_032353769.1\|2951760_2952513_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_001112824.1\|2952532_2955178_-	fimbrial usher protein YfcU	NA	NA	NA	NA
WP_000033328.1\|2955259_2955823_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_001195819.1\|2956506_2956992_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000426169.1\|2957194_2959339_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_000531954.1\|2959338_2960649_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_001296869.1\|2960828_2961113_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001296861.1\|2961484_2962825_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000937833.1\|2963191_2964250_+	hypothetical protein	NA	NA	NA	NA
WP_000776768.1\|2964431_2965187_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_000368131.1\|2965480_2966413_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0
2966488:2966512	attL	NA	NA	NA	NA
WP_000331702.1\|2966635_2974987_-	hypothetical protein	Q08J70	Stx2-converting_phage	0.0e+00	100.0
WP_000012437.1\|2975056_2976322_-	hypothetical protein	Q08J71	Stx2-converting_phage	1.7e-204	100.0
WP_000540391.1\|2976332_2976584_-\|bacteriocin	bacteriocin	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
WP_000455645.1\|2976594_2977041_-	hypothetical protein	Q08J73	Stx2-converting_phage	1.1e-76	100.0
WP_000509019.1\|2977043_2977697_-	hypothetical protein	Q08J74	Stx2-converting_phage	9.3e-114	100.0
WP_000035555.1\|2977790_2978192_-	hypothetical protein	Q08J75	Stx2-converting_phage	7.0e-72	100.0
WP_001135718.1\|2978247_2978388_-	Hok/Gef family protein	G9L6L7	Escherichia_phage	2.0e-18	97.8
WP_000835365.1\|2978621_2979356_-	Ail/Lom family outer membrane beta-barrel protein	Q08J76	Stx2-converting_phage	5.7e-136	100.0
WP_001447645.1\|2979446_2980064_-	hypothetical protein	Q08J77	Stx2-converting_phage	8.8e-122	100.0
WP_001369201.1\|2980069_2980351_-	hypothetical protein	Q08J78	Stx2-converting_phage	3.1e-50	100.0
WP_000162956.1\|2980365_2981634_-	host specificity protein J	Q08J79	Stx2-converting_phage	9.9e-221	100.0
WP_001146318.1\|2981630_2983256_-	hypothetical protein	A0A088CBK0	Shigella_phage	0.0e+00	100.0
WP_000276175.1\|2983578_2983806_-	hypothetical protein	A0A088CBQ7	Shigella_phage	1.2e-39	100.0
WP_000537687.1\|2983818_2984364_-	hypothetical protein	A0A088CD67	Shigella_phage	6.8e-94	100.0
WP_061104281.1\|2984439_2986704_-\|tail	phage tail protein	Q08J84	Stx2-converting_phage	1.1e-76	89.3
WP_000207915.1\|2986700_2987351_-	hypothetical protein	Q08J85	Stx2-converting_phage	7.8e-121	100.0
WP_000829199.1\|2987350_2987914_-	hypothetical protein	A0A2R2Z349	Escherichia_phage	3.5e-101	98.9
WP_001447720.1\|2987897_2988359_-	hypothetical protein	Q08J87	Stx2-converting_phage	6.6e-74	100.0
WP_001140444.1\|2988408_2988798_-	hypothetical protein	V5UT93	Shigella_phage	9.9e-63	100.0
WP_000214474.1\|2988852_2990067_-\|capsid	N4-gp56 family major capsid protein	A0A2R2Z358	Escherichia_phage	1.3e-233	100.0
WP_000345014.1\|2990090_2991098_-	hypothetical protein	Q08J90	Stx2-converting_phage	1.8e-180	100.0
WP_015983544.1\|2991255_2993400_-\|portal	phage portal protein	Q08J91	Stx2-converting_phage	0.0e+00	100.0
WP_000143988.1\|2993399_2995106_-\|terminase	terminase	A0A2R2Z350	Escherichia_phage	0.0e+00	100.0
WP_001086073.1\|2995086_2995893_-\|terminase	terminase	A0A0P0ZG40	Escherichia_phage	1.3e-133	100.0
WP_001301714.1\|2995948_2996152_-	hypothetical protein	A0A2R2Z338	Escherichia_phage	7.7e-35	100.0
WP_000738505.1\|2996301_2996595_+	serum resistance lipoprotein Bor	A0A2R2X2B2	Escherichia_phage	6.8e-48	100.0
WP_001082654.1\|2996626_2997091_-\|lysis	lysis protein	A0A2R2Z341	Escherichia_phage	5.8e-78	100.0
WP_000455406.1\|2997098_2997248_-	hypothetical protein	A0A0P0ZFU6	Escherichia_phage	2.4e-17	100.0
WP_001056885.1\|2997247_2997817_-	hypothetical protein	A0A2R2Z339	Escherichia_phage	1.8e-105	100.0
WP_000087461.1\|2998091_2998625_-	lysozyme	V5USG4	Shigella_phage	7.9e-103	100.0
WP_000284506.1\|2998629_2998845_-\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001290212.1\|2998921_2999194_-	DUF826 domain-containing protein	A0A1I9LJR2	Stx_converting_phage	1.2e-22	100.0
WP_000143458.1\|2999234_2999414_-	DUF1378 family protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
WP_085948178.1\|3000841_3002054_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_032353896.1\|3002094_3002799_-	SASA family carbohydrate esterase	A0A2R2Z342	Escherichia_phage	5.1e-134	100.0
WP_000738068.1\|3003284_3003554_-	Shiga toxin Stx2a subunit B	A0A2R2Z326	Escherichia_phage	1.2e-43	100.0
WP_000649753.1\|3003565_3004525_-	Shiga toxin Stx2c subunit A	Q776Q3	Enterobacteria_phage	5.6e-176	100.0
WP_001356551.1\|3004907_3005060_-	DNA methylase	A0A2R2Z327	Escherichia_phage	4.0e-20	100.0
WP_001204844.1\|3005308_3005743_-	antitermination protein	A0A2R2Z331	Escherichia_phage	5.6e-83	100.0
WP_000144764.1\|3005735_3005930_-	protein ninH	G9L694	Escherichia_phage	1.9e-30	100.0
WP_001108022.1\|3005926_3006532_-	recombination protein NinG	G9L693	Escherichia_phage	8.6e-98	100.0
WP_001292290.1\|3006531_3007254_-	phage regulatory/antirepressor protein	G9L692	Escherichia_phage	9.2e-131	100.0
WP_000566871.1\|3007246_3007417_-	protein ninF	K7PM86	Enterobacteria_phage	5.5e-26	100.0
WP_001254257.1\|3007413_3007596_-	NinE family protein	A0A0P0ZC71	Stx2-converting_phage	4.3e-29	100.0
WP_015983551.1\|3007592_3008120_-	phage N-6-adenine-methyltransferase	Q08J31	Stx2-converting_phage	1.2e-100	100.0
WP_000573864.1\|3008116_3008719_-	endonuclease	G9L687	Escherichia_phage	1.7e-114	100.0
WP_001229012.1\|3008711_3009128_-	NinB protein	G9L686	Escherichia_phage	3.9e-73	100.0
WP_000103680.1\|3009301_3009517_-	hypothetical protein	G9L684	Escherichia_phage	2.2e-32	100.0
WP_000818843.1\|3009661_3009868_-	hypothetical protein	G9L683	Escherichia_phage	2.7e-27	100.0
WP_001036031.1\|3009940_3010210_-	hypothetical protein	Q08J36	Stx2-converting_phage	4.9e-45	100.0
WP_000131492.1\|3010209_3011646_-	AAA family ATPase	Q8VNP7	Enterobacteria_phage	6.1e-275	100.0
WP_000065668.1\|3011635_3012535_-	hypothetical protein	Q8VNP8	Enterobacteria_phage	1.6e-164	100.0
WP_000166207.1\|3012527_3012674_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_001535912.1\|3012706_3013003_-	phage regulatory protein CII	Q9EYB4	Enterobacteria_phage	5.8e-47	98.0
WP_000247282.1\|3013122_3013353_-	helix-turn-helix domain-containing protein	A0A2D1GLN0	Escherichia_phage	2.1e-36	100.0
WP_077792758.1\|3013500_3014193_+	helix-turn-helix transcriptional regulator	A0A2D1GM27	Escherichia_phage	4.5e-135	100.0
WP_032346936.1\|3014517_3014961_+	hypothetical protein	E5AGE5	Erwinia_phage	2.4e-44	61.9
WP_085948178.1\|3015319_3016533_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000065374.1\|3017030_3017399_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_001198861.1\|3017471_3017636_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000372941.1\|3017604_3017748_+	host cell division inhibitory peptide Kil	A0A1I9LJN2	Stx_converting_phage	1.2e-18	100.0
WP_000995439.1\|3017823_3018120_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000186866.1\|3018905_3019586_+	YqaJ viral recombinase family protein	A0A0P0ZBV6	Stx2-converting_phage	2.1e-132	100.0
WP_000682304.1\|3019582_3019765_+	DUF1317 domain-containing protein	A0A0P0ZD61	Stx2-converting_phage	7.4e-29	100.0
WP_000548528.1\|3019737_3019929_+	DUF1382 family protein	A0A0P0ZC60	Stx2-converting_phage	5.6e-27	100.0
WP_001447688.1\|3019939_3020221_+	hypothetical protein	Q08J56	Stx2-converting_phage	6.5e-48	100.0
WP_000763383.1\|3020319_3020541_+	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
WP_001289935.1\|3020537_3021311_+	ead/Ea22-like family protein	Q08J58	Stx2-converting_phage	1.0e-143	100.0
WP_000797281.1\|3021462_3021651_+	hypothetical protein	A0A1I9LJM4	Stx_converting_phage	2.8e-31	100.0
WP_000951706.1\|3021652_3021862_+	hypothetical protein	A0A077SL56	Escherichia_phage	4.2e-36	100.0
WP_000203836.1\|3023329_3023953_+	phage antirepressor Ant	A0A0P0ZAZ7	Stx2-converting_phage	1.7e-112	100.0
WP_000669287.1\|3023995_3024163_+	hypothetical protein	A0A0P0ZCR2	Stx2-converting_phage	2.9e-27	100.0
WP_000163445.1\|3024389_3025022_+	adenine methylase	Q08J66	Stx2-converting_phage	3.3e-124	100.0
WP_106898674.1\|3025030_3025189_+	DUF1382 family protein	A0A2R2X2A7	Escherichia_phage	1.1e-20	98.1
WP_000994801.1\|3025224_3025593_+	DUF1627 domain-containing protein	A0A0P0ZCA9	Stx2-converting_phage	8.8e-53	100.0
WP_000453637.1\|3025671_3025854_+	helix-turn-helix domain-containing protein	A0A2R2Z2X2	Escherichia_phage	4.1e-27	100.0
WP_001218308.1\|3025837_3027007_-\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	1.7e-230	100.0
3027202:3027226	attR	NA	NA	NA	NA

DBSCAN-SWA_15

3256695 : 3341995

Enterobacteria_phage(75.0%)

protease,terminase,portal,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001298974.1\|3256695_3257433_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|3257564_3258899_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_000365855.1\|3259108_3259990_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189207.1\|3260093_3260681_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627807.1\|3260736_3261120_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	1.4e-32	72.0
WP_001262716.1\|3261423_3262113_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.1e-56	48.8
WP_000997403.1\|3262160_3263198_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|3263404_3263824_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_001341635.1\|3263892_3264591_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000083007.1\|3264622_3267283_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949265.1\|3267396_3268752_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_000464877.1\|3268776_3269121_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000841103.1\|3269117_3270416_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
WP_001235102.1\|3276268_3278842_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040115.1\|3278971_3279703_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079107.1\|3279699_3280680_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|3280814_3281552_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|3281822_3282164_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|3282267_3282315_+	hypothetical protein	NA	NA	NA	NA
WP_000200116.1\|3282413_3283574_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225214.1\|3283616_3284738_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168054.1\|3284748_3285819_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	5.3e-90	51.2
WP_000976004.1\|3286028_3286394_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212391.1\|3286543_3287062_+	YfiR family protein	NA	NA	NA	NA
WP_000969032.1\|3287051_3288278_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589821.1\|3288293_3288776_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|3288852_3289200_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264774.1\|3289241_3290009_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|3290039_3290588_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|3290606_3290855_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460032.1\|3291103_3292465_-	signal recognition particle protein	NA	NA	NA	NA
WP_001189267.1\|3292556_3293423_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_010723175.1\|3293443_3294730_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|3294784_3295378_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059169.1\|3295500_3296379_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880910.1\|3296464_3298126_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|3298274_3298616_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117838.1\|3298677_3298968_-	RnfH family protein	NA	NA	NA	NA
WP_000600190.1\|3298957_3299434_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|3299565_3300048_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_001217540.1\|3300896_3301145_+	DinI-like family protein	Q687E4	Enterobacteria_phage	2.4e-38	100.0
WP_001023452.1\|3301512_3301782_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	6.4e-45	100.0
WP_000279058.1\|3301783_3303106_-\|tail	tail fiber protein	Q687E6	Enterobacteria_phage	3.7e-77	99.1
WP_001230455.1\|3303170_3303770_-	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	8.8e-111	99.0
WP_000514851.1\|3303837_3307314_-	host specificity protein J	Q687E8	Enterobacteria_phage	0.0e+00	96.7
WP_122996286.1\|3307560_3308193_-\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.0e-104	97.6
WP_001369128.1\|3308138_3308882_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	3.3e-147	98.0
WP_001152113.1\|3308887_3309586_-\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	4.7e-132	99.1
WP_000847298.1\|3309585_3309915_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_000918243.1\|3309911_3312557_-\|tail	phage tail tape measure protein	Q687F3	Enterobacteria_phage	0.0e+00	100.0
WP_000532073.1\|3312600_3312909_-\|tail	phage tail assembly protein T	Q687F4	Enterobacteria_phage	1.3e-54	100.0
WP_000479043.1\|3312935_3313358_-\|tail	phage minor tail protein G	Q687F5	Enterobacteria_phage	5.1e-73	100.0
WP_000235090.1\|3313371_3314124_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	5.8e-136	100.0
WP_000682716.1\|3314131_3314530_-\|tail	tail protein	Q9EYD7	Enterobacteria_phage	5.9e-71	100.0
WP_000974966.1\|3314542_3315166_-	hypothetical protein	Q9EYD6	Enterobacteria_phage	6.6e-101	100.0
WP_001281350.1\|3315168_3315450_-	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	3.9e-45	97.8
WP_001097065.1\|3315442_3315769_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	6.1e-50	100.0
WP_001114424.1\|3315856_3317881_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	0.0e+00	99.8
WP_000974564.1\|3317825_3319328_-\|portal	phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
WP_000102413.1\|3319327_3319540_-	hypothetical protein	Q687G1	Enterobacteria_phage	2.3e-29	98.6
WP_001077625.1\|3319536_3321660_-\|terminase	phage terminase large subunit family protein	Q9EYD1	Enterobacteria_phage	0.0e+00	100.0
WP_000373407.1\|3321656_3322133_-	DUF1441 family protein	Q8VNN8	Enterobacteria_phage	3.3e-84	100.0
WP_012816791.1\|3322607_3322793_-	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000752026.1\|3323796_3324066_-	Shiga toxin Stx1a subunit B	Q7AYI7	Enterobacteria_phage	1.6e-43	100.0
WP_000691354.1\|3324075_3325023_-	Shiga toxin Stx1 subunit A	Q777W4	Enterobacteria_phage	3.2e-171	100.0
WP_001204849.1\|3325529_3325964_-	antitermination protein	Q8VNP1	Enterobacteria_phage	4.3e-83	100.0
WP_000144764.1\|3325956_3326151_-	protein ninH	G9L694	Escherichia_phage	1.9e-30	100.0
WP_001108006.1\|3326147_3326753_-	recombination protein NinG	Q8VNP2	Enterobacteria_phage	1.9e-97	100.0
WP_000211413.1\|3327550_3328255_-	phage antirepressor Ant	Q8VNP5	Enterobacteria_phage	9.6e-133	100.0
WP_001254256.1\|3328529_3328712_-	NinE family protein	A0A0N7C1X3	Escherichia_phage	5.7e-29	100.0
WP_000153268.1\|3328708_3329236_-	phage N-6-adenine-methyltransferase	Q9EYC2	Enterobacteria_phage	1.6e-100	100.0
WP_001303571.1\|3329232_3329679_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	2.4e-81	100.0
WP_001449504.1\|3329635_3329872_-	restriction alleviation protein, Lar family	Q687G3	Enterobacteria_phage	9.3e-40	100.0
WP_000103678.1\|3329882_3330098_-	hypothetical protein	A0A0N7KZ98	Stx2-converting_phage	7.7e-33	100.0
WP_001000130.1\|3330230_3330509_-	hypothetical protein	Q9EYB9	Enterobacteria_phage	4.4e-49	100.0
WP_001036037.1\|3330578_3330848_-	hypothetical protein	Q687G4	Enterobacteria_phage	8.4e-45	100.0
WP_000131492.1\|3330847_3332284_-	AAA family ATPase	Q8VNP7	Enterobacteria_phage	6.1e-275	100.0
WP_000065668.1\|3332273_3333173_-	hypothetical protein	Q8VNP8	Enterobacteria_phage	1.6e-164	100.0
WP_000166207.1\|3333165_3333312_-	DUF2740 family protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_001177653.1\|3333346_3333625_-	transcriptional regulator	Q8VNP9	Enterobacteria_phage	3.6e-43	100.0
WP_000335772.1\|3334500_3335124_+	hypothetical protein	Q8VNQ0	Enterobacteria_phage	6.8e-122	99.5
WP_000532424.1\|3335124_3335637_+	single-stranded DNA-binding protein	Q8VNQ1	Enterobacteria_phage	1.8e-75	100.0
WP_001111331.1\|3335650_3335944_+	DUF2856 family protein	Q687G7	Enterobacteria_phage	8.5e-51	100.0
WP_001214463.1\|3335954_3336122_+	DUF2737 family protein	Q687G8	Enterobacteria_phage	3.0e-24	100.0
WP_110826215.1\|3336118_3336718_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	2.0e-110	99.5
WP_000448925.1\|3338037_3338454_+	hypothetical protein	A0A1B5FPM5	Escherichia_phage	1.1e-72	100.0
WP_000214990.1\|3338526_3340275_-	hypothetical protein	A0A1B5FPH1	Escherichia_phage	0.0e+00	99.8
WP_001426837.1\|3340276_3341995_-	ATP-binding protein	A0A1B5FPD5	Escherichia_phage	5.5e-307	99.7

DBSCAN-SWA_16

3413523 : 3420663

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272924.1\|3413523_3416085_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
WP_001141347.1\|3416190_3416847_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	5.6e-50	47.2
WP_001272549.1\|3416897_3417695_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	5.9e-70	56.3
WP_000847985.1\|3417860_3418769_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590389.1\|3418765_3420028_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.7e-135	61.4
WP_001278994.1\|3420024_3420663_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_17

3656463 : 3711125

Staphylococcus_phage(25.0%)

protease,transposase,tRNA,integrase

attL 3689982:3689997|attR 3708022:3708037

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001297457.1\|3656463_3657222_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_001169551.1\|3657277_3658021_-	2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_000193113.1\|3658007_3659117_-	D-glucosaminate-6-phosphate ammonia lyase	NA	NA	NA	NA
WP_160333632.1\|3659120_3659981_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_000380263.1\|3659977_3660727_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_001284302.1\|3660752_3661238_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_000214203.1\|3661248_3661677_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_001252647.1\|3661795_3664594_-	transcriptional regulator DagR	NA	NA	NA	NA
WP_000105566.1\|3664852_3665773_-	agmatinase	NA	NA	NA	NA
WP_000758903.1\|3665908_3666640_-	membrane protein	NA	NA	NA	NA
WP_001344776.1\|3666785_3668762_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001338822.1\|3668770_3668902_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_001303650.1\|3669037_3669253_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|3669556_3670711_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001112301.1\|3671146_3672541_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|3672617_3673115_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|3673209_3673917_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222508.1\|3673996_3674728_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593273.1\|3674740_3675691_+	glutathione synthase	NA	NA	NA	NA
WP_000126441.1\|3675727_3676363_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017111.1\|3676362_3676779_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001055633.1\|3676954_3677935_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|3677952_3678657_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|3678674_3679241_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|3679237_3679528_+	YggU family protein	NA	NA	NA	NA
WP_001174743.1\|3679535_3680129_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239919.1\|3680121_3681258_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000784004.1\|3681571_3682558_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_000577033.1\|3682602_3683106_+	TRAP transporter small permease	NA	NA	NA	NA
WP_000378946.1\|3683105_3684407_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_000745216.1\|3684462_3685470_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394117.1\|3685586_3686633_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|3686808_3687528_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107564.1\|3687711_3688038_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|3688037_3688757_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001321419.1\|3688917_3689970_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
3689982:3689997	attL	NA	NA	NA	NA
WP_000091700.1\|3689997_3690273_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|3690337_3691417_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001049791.1\|3691618_3692875_+	nucleoside permease NupG	NA	NA	NA	NA
WP_000839773.1\|3692924_3695060_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234516.1\|3695457_3696165_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218764.1\|3696543_3697803_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	8.4e-79	42.8
WP_085948178.1\|3698246_3699459_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001121747.1\|3701498_3703148_+	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA
WP_000609741.1\|3704793_3705468_+	type III secretion system effector cysteine methyltransferase NleE	NA	NA	NA	NA
WP_000823907.1\|3707384_3708203_-	YjiK family protein	NA	NA	NA	NA
3708022:3708037	attR	NA	NA	NA	NA
WP_001358534.1\|3708330_3709476_-	type III secretion system LEE effector EspG	NA	NA	NA	NA
WP_000878223.1\|3709962_3710829_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.9e-51	40.6
WP_000169527.1\|3710825_3711125_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_18

4947450 : 4992366

Stx2-converting_phage(39.53%)

head,holin,terminase,tRNA,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000956557.1\|4947450_4947984_+	hypothetical protein	K7PKJ4	Enterobacteria_phage	1.1e-99	100.0
WP_001093918.1\|4948401_4948683_-	hypothetical protein	K7PGU0	Enterobacteria_phage	8.7e-45	98.9
WP_001061339.1\|4948719_4949292_-	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	6.7e-108	97.9
WP_001094871.1\|4949291_4950026_-	DUF551 domain-containing protein	S5MC19	Escherichia_phage	1.4e-139	98.8
WP_001014294.1\|4950028_4950220_-	hypothetical protein	G9L660	Escherichia_phage	9.5e-27	100.0
WP_000829414.1\|4950272_4950689_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.4e-30	69.9
WP_000145671.1\|4950835_4951309_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	4.0e-66	75.5
WP_001242740.1\|4951305_4951656_-	hypothetical protein	A0A0P0ZBF8	Stx2-converting_phage	1.6e-56	94.8
WP_000008211.1\|4951646_4952183_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	3.1e-99	98.3
WP_000081302.1\|4952310_4953135_-	YfdQ family protein	Q8SBF9	Shigella_phage	1.0e-149	99.6
WP_000135680.1\|4953200_4953563_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_001345148.1\|4954266_4954959_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	8.3e-121	96.1
WP_001191679.1\|4955056_4955317_+	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	7.8e-40	97.7
WP_000515862.1\|4955309_4955861_+	hypothetical protein	Q8SBF4	Shigella_phage	9.9e-101	99.5
WP_001047110.1\|4957373_4958126_+	antitermination protein	K7PGU5	Enterobacteria_phage	5.3e-137	99.2
WP_001339373.1\|4958435_4958588_+	restriction endonuclease subunit M	A0A2R2Z327	Escherichia_phage	3.4e-19	98.0
WP_000143076.1\|4959405_4961256_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.9
WP_000411802.1\|4961704_4961911_+\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	2.4e-31	100.0
WP_000075132.1\|4961910_4962408_+	lysozyme RrrD	A0A0N7KZA0	Stx2-converting_phage	2.6e-92	100.0
WP_001208681.1\|4962624_4962810_+	membrane protein	A0A1U9AJA4	Stx1_converting_phage	2.9e-20	78.7
WP_001303878.1\|4963337_4963652_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000958380.1\|4964552_4965116_+\|terminase	terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.1e-89	100.0
WP_001411753.1\|4965112_4966774_+\|terminase	terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.3
WP_110826213.1\|4966837_4968775_+\|capsid	phage major capsid protein	H6WZL0	Escherichia_phage	0.0e+00	99.5
WP_001063025.1\|4968819_4969041_+	hypothetical protein	A0A0P0ZD92	Stx2-converting_phage	5.8e-36	100.0
WP_000125984.1\|4971405_4971732_+\|head,tail	phage gp6-like head-tail connector protein	A0A0P0ZDE0	Stx2-converting_phage	5.4e-54	100.0
WP_001007911.1\|4971741_4972092_+\|head	phage head closure protein	H6WZL5	Escherichia_phage	2.0e-59	100.0
WP_000573391.1\|4972088_4972535_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133393.1\|4972531_4972876_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	9.4e-57	99.1
WP_001275480.1\|4972944_4973661_+\|tail	tail protein	A0A0P0ZD29	Stx2-converting_phage	1.4e-126	97.9
WP_001030060.1\|4973666_4974041_+\|tail	tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	3.0e-64	99.2
WP_001453698.1\|4974136_4974346_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_000212770.1\|4974397_4977640_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	99.0
WP_000807964.1\|4977632_4977974_+\|tail	phage tail protein	A0A0P0ZCS8	Stx2-converting_phage	8.7e-63	100.0
WP_001152159.1\|4977973_4978672_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.3e-129	97.4
WP_000194763.1\|4978682_4979426_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	5.4e-150	99.2
WP_126303346.1\|4979371_4980004_+\|tail	tail assembly protein	Q6H9T3	Enterobacteria_phage	1.2e-97	90.5
WP_000514845.1\|4980239_4983716_+	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	96.1
WP_001216290.1\|4983784_4984408_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.1e-68	60.4
WP_000279033.1\|4984472_4985786_+\|tail	tail fiber protein	A0A0P0ZD68	Stx2-converting_phage	3.3e-78	99.1
WP_001023417.1\|4985787_4986057_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	2.4e-44	98.9
WP_000442132.1\|4986217_4986640_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	5.7e-72	97.0
WP_001345294.1\|4986769_4987828_-	T3SS effector EspW	NA	NA	NA	NA
WP_001117798.1\|4987906_4988557_-	T3SS effector NleG family protein	B6DZZ5	Stx2-converting_phage	2.8e-25	37.2
WP_001132154.1\|4988739_4989330_+	T3SS effector guanine nucleotide exchange factor EspM2	NA	NA	NA	NA
WP_001217542.1\|4989831_4990080_-	DinI-like family protein	A5LH55	Enterobacteria_phage	3.1e-38	98.8
WP_000543817.1\|4991328_4992366_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

DBSCAN-SWA_19

5107002 : 5170865

Vibrio_phage(12.5%)

protease,transposase,tRNA,integrase

attL 5148741:5148770|attR 5174232:5174261

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000811566.1\|5107002_5107278_+\|protease	protease activator YjfN	NA	NA	NA	NA
WP_001299838.1\|5107394_5109020_-	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_000943991.1\|5109103_5110267_-	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	4.9e-81	43.8
WP_000101670.1\|5110269_5110908_-	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_000547760.1\|5110917_5111316_-	DUF350 domain-containing protein	NA	NA	NA	NA
WP_000012546.1\|5111333_5111993_-	YjfK family protein	NA	NA	NA	NA
WP_000511955.1\|5112043_5112742_-	PspA/IM30 family protein	NA	NA	NA	NA
WP_000220137.1\|5112760_5113162_-	DUF2170 family protein	NA	NA	NA	NA
WP_001293281.1\|5113288_5114020_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000076318.1\|5114199_5116560_-	ribonuclease R	Q0GXV6	Lactococcus_phage	6.2e-67	33.1
WP_001177639.1\|5116598_5117024_-	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA
WP_000527955.1\|5117228_5118527_-	adenylosuccinate synthase	W5S5V7	Pithovirus	2.2e-66	35.9
WP_001089295.1\|5118630_5118828_-	DUF2065 domain-containing protein	NA	NA	NA	NA
WP_001232412.1\|5118909_5119914_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_000312488.1\|5119916_5121176_-\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5
WP_000460353.1\|5121261_5122542_-	GTPase HflX	NA	NA	NA	NA
WP_001051883.1\|5122618_5122927_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_001280349.1\|5123012_5123963_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_001122520.1\|5123955_5125803_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.8e-60	41.3
WP_000990321.1\|5125812_5127150_-	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
WP_000981977.1\|5127168_5127630_-\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
WP_001307537.1\|5127601_5129149_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_001294195.1\|5129147_5130287_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_010723271.1\|5130269_5130323_-	hypothetical protein	NA	NA	NA	NA
WP_001295188.1\|5131186_5131732_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
WP_000041970.1\|5131826_5132879_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_000934920.1\|5132975_5133944_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_001236850.1\|5133965_5137289_+	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_001276180.1\|5137317_5137632_-	YjeO family protein	NA	NA	NA	NA
WP_000342867.1\|5137628_5137943_-	hypothetical protein	NA	NA	NA	NA
WP_001346081.1\|5137994_5139497_-	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_000004771.1\|5139715_5140693_-	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
WP_001192991.1\|5141017_5142826_+	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
WP_000829498.1\|5142818_5143553_+	fumarate reductase iron-sulfur protein	NA	NA	NA	NA
WP_000208757.1\|5143563_5143959_+	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_001299198.1\|5143969_5144329_+	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_001299193.1\|5144391_5145525_+	BlaEC family class C beta-lactamase	NA	NA	NA	NA
WP_001238378.1\|5145613_5146147_+	lipocalin Blc	A0A1W6JNX6	Morganella_phage	2.7e-47	55.0
WP_000118482.1\|5146143_5146461_-	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_000239596.1\|5146642_5146789_-	lipoprotein toxin entericidin B	NA	NA	NA	NA
WP_000977757.1\|5146899_5147025_-	lipoprotein antitoxin entericidin A	NA	NA	NA	NA
WP_000257278.1\|5147076_5147643_-	elongation factor P	NA	NA	NA	NA
WP_000940530.1\|5147684_5148713_+	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
5148741:5148770	attL	NA	NA	NA	NA
WP_001008073.1\|5149102_5149972_+	hypothetical protein	NA	NA	NA	NA
WP_000558209.1\|5150175_5150529_-	DUF4156 domain-containing protein	NA	NA	NA	NA
WP_000729117.1\|5150666_5152313_-	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
WP_001026276.1\|5152356_5152650_-	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
WP_000015837.1\|5152925_5154182_+	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
WP_001267448.1\|5154197_5154674_-	membrane protein FxsA	NA	NA	NA	NA
WP_000069437.1\|5155010_5156447_+	aspartate ammonia-lyase	NA	NA	NA	NA
WP_000961959.1\|5156564_5157866_+	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA
WP_000883400.1\|5157981_5158320_+	divalent cation tolerance protein CutA	NA	NA	NA	NA
WP_000068905.1\|5158295_5159993_+	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_001188520.1\|5160029_5160605_+	transcriptional regulator	NA	NA	NA	NA
WP_001218841.1\|5160984_5162250_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.7e-77	38.3
WP_000631719.1\|5163911_5164259_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.0e-42	72.0
WP_000603950.1\|5166580_5167129_-	Ail/Lom family outer membrane beta-barrel protein	Q9LA63	Enterobacterial_phage	1.3e-15	32.4
WP_001453071.1\|5167701_5167875_-	hypothetical protein	NA	NA	NA	NA
WP_085948178.1\|5169267_5170481_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_001254202.1\|5170574_5170865_+\|transposase	transposase	A0A1W6JP07	Morganella_phage	7.2e-42	99.0
5174232:5174261	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP029690

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP029690_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029690_1

175804-175961

Orphan

Consensus_repeat	Method
CCGTACCCGGTATAGTGGAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP029690_1

>merge|NZ_CP029690|1|175804-175961|PILER-CR
CCGTACCCGGTATAGTGGATGAGAACTACTGCTAATCGGTTACCGGGAATGTGGTGGTACTGGGTGGAAAGGTTTACCCGGTATAGTGGATCGTGGCAGTGTCATCTTTCCGGATAGCATGACGTCACGGTTAGGAAACCGTACCCGGTATAGTGGAT

>NZ_CP029690|1|1|175804-175961|PILER-CR
CCGTACCCGGTATAGTGGAT	GAGAACTACTGCTAATCGGTTACCGGGAATGTGGTGGTACTGGGTGGAAAG
GTTTACCCGGTATAGTGGAT	CGTGGCAGTGTCATCTTTCCGGATAGCATGACGTCACGGTTAGGAAA
CCGTACCCGGTATAGTGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029690.1\|WP_001281654.1\|182349_183507_-\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_001178650.1\|184705_185527_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_000097746.1\|174683_175565_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|374546
NZ_CP029690.1\|WP_001015069.1\|186731_187808_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|272946
NZ_CP029690.1\|WP_000262469.1\|173695_174292_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372704
NZ_CP029690.1\|WP_000091308.1\|168512_168878_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_000704115.1\|176150_176666_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_001226764.1\|177316_179773_-\|DUF4165-domain-containing-protein	unknown	unknown	gnl\|CDD\|372704
NZ_CP029690.1\|WP_000937595.1\|168877_170065_+\|IS91-family-transposase	unknown	unknown	gnl\|CDD\|377437
NZ_CP029690.1\|WP_001395483.1\|166475_166739_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_000178072.1\|166966_167671_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_141009746.1\|173288_173540_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371986
NZ_CP029690.1\|WP_000357614.1\|186513_186714_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_000682872.1\|185809_186517_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199908
NZ_CP029690.1\|WP_001277090.1\|180409_182086_-\|DUF4942-domain-containing-protein	unknown	unknown	gnl\|CDD\|372683
NZ_CP029690.1\|WP_000795659.1\|172673_173282_+\|DUF4165-domain-containing-protein	unknown	unknown	gnl\|CDD\|372706
NZ_CP029690.1\|WP_162616905.1\|168235_168478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029690.1\|WP_032351497.1\|183866_184691_+\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|273146
NZ_CP029690.1\|WP_001289315.1\|167703_168123_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP029690.1\|WP_000937595.1\|168877_170065_+\|IS91-family-transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	1.07189e-43
NZ_CP029690.1\|WP_000682872.1\|185809_186517_-\|hypothetical-protein	gnl\|CDD\|199908	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40. Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.	0.000379412
NZ_CP029690.1\|WP_141009746.1\|173288_173540_+\|hypothetical-protein	gnl\|CDD\|371986	pfam12245, Big_3_2, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	4.39279e-09
NZ_CP029690.1\|WP_000097746.1\|174683_175565_+\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|374546	pfam16441, DUF5038, Domain of unknown function (DUF5038). This family consists of several uncharacterized proteins around 200 residues in length and is mainly found in various Clostridiales species. The function of this family is unknown.	0.000541832
NZ_CP029690.1\|WP_000262469.1\|173695_174292_+\|hypothetical-protein	gnl\|CDD\|372704	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	1.23519e-43
NZ_CP029690.1\|WP_000795659.1\|172673_173282_+\|DUF4165-domain-containing-protein	gnl\|CDD\|372706	pfam13752, DUF4165, Domain of unknown function (DUF4165).	1.56662e-39
NZ_CP029690.1\|WP_001277090.1\|180409_182086_-\|DUF4942-domain-containing-protein	gnl\|CDD\|372683	pfam13708, DUF4942, Domain of unknown function (DUF4942). The function of this family is not known.	2.85133e-16
NZ_CP029690.1\|WP_001015069.1\|186731_187808_-\|hypothetical-protein	gnl\|CDD\|272946	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein. This model represents the most well-conserved core of a set of chromosomal and plasmid partition proteins related to ParB, including Spo0J, RepB, and SopB. Spo0J has been shown to bind a specific DNA sequence that, when introduced into a plasmid, can serve as partition site. Study of RepB, which has nicking-closing activity, suggests that it forms a transient protein-DNA covalent intermediate during the strand transfer reaction.	0.00163255
NZ_CP029690.1\|WP_032351497.1\|183866_184691_+\|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	2.27961e-67
NZ_CP029690.1\|WP_001226764.1\|177316_179773_-\|DUF4165-domain-containing-protein	gnl\|CDD\|372704	pfam13750, Big_3_3, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.	9.32876e-65

>NZ_CP029690.1|WP_000097746.1|174683_175565_+|RepB-family-plasmid-replication-initiator-protein
MSSNNNKLSLVIEESLKDSGEVIQLFPTLKQTIQPKVLLRLGVFVPTLKSTDKGGRKSHHIDATEPLSRLSIVEGEGYSQIQIYGPRLDMDTDFKSWCGIVYALSNRPLDSEGQLELNFPEFAKFCGFDTKRIDKQLKERFDASLTRIARTNISFIKKIPGTDDQITINMHLVESTYYDSSTGKIIIKPNSKLNTLYRVDGKTRLYLKTLQKLARKESAQALYLYLAELPSTFYRIGFDRLRGRLQLSSHLGNQNATVKKALGQLKEIGFLEYSIDKENGDYVLNILKRNMKP
>NZ_CP029690.1|WP_000262469.1|173695_174292_+|hypothetical-protein
MVYGLENIRIALADNLTTPRITRLQITGGPTADNVELTWSPAGTNVYAPEYPRLFPSFEPSENYALSVTVSDSQSNSKTYTQKFSYLPNNLVQLHNLRTLSVSSALKTSLNEPLAYLSTNVLRKSNGEIAKDVQSATLTVRKDAAFGIKFNGVQAALGESVEVKIDMGLGDNLLVPIYPAENGKVGTSEFMIQIDELK
>NZ_CP029690.1|WP_141009746.1|173288_173540_+|hypothetical-protein
MTGQKMYHTYSKNSVKGAGIPDSNLDEDFTAKVVIYDNAGNTRTLPLQLFRYDNYLGGPRSAKLRQRGAKGFRISGLFSWDDR
>NZ_CP029690.1|WP_000795659.1|172673_173282_+|DUF4165-domain-containing-protein
MKNQAIALAMAMLGVSVPASAQIYESIFTDTNGIEVHAPSTRLLLNPASPVTLTLIAGLDRYVNVKITSATGTQLLNTTTTRTSVSDRLKAGDGSEFYGKKVTLPVLGEGRSVVQVSILDLNQSVVATYSYNWLVDTTPLSGNALTGNAAYGSTAGSVWKMGLEATGQFDFTSTNVTDVNGIEKGMFYVYHSNGSLFSTTQM
>NZ_CP029690.1|WP_000937595.1|168877_170065_+|IS91-family-transposase
MLPRFADIFQQGNRWLNWLEKQPEGSVRPVVIESVTKIMACGTTLMGYTQWCCSSPDCSHIKKICFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVFTLPCQYWSLVFHNRWLLAEMSRIAADVIQEICRQADVVPGIFTVIHTWGRDQQWHPHIHLSTTTGGVTSDHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVIPDALAAEGSSKRDWNRFLDSHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPMSRLEHYAGQDEIGLRYNSHRTKREEYLVMSGDEFMERFSWHVADKGFRMVRYYGFLSPVKRRLLEDVVYVITETVRKTAMQIRWRGMYQRLLKVDPLKCILCGGQMRFTGLKRGYRLTELVLMHEPLAQQRVCG
>NZ_CP029690.1|WP_000091308.1|168512_168878_+|hypothetical-protein
MSRSAKPRKRKPAPQRSKLPRYVVKLHDDDFFDEEDAEALRFDNFDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILAGISAGGMYCPECGTVHWPDGVPPPF
>NZ_CP029690.1|WP_162616905.1|168235_168478_+|hypothetical-protein
MKLDSPTLPLVAGKMGIRTPSPCPKSIVMSFESPGTTATPFILTAKAASLRTVSVPVCAPVISRVGSLAAAACHGLKLPL
>NZ_CP029690.1|WP_001289315.1|167703_168123_-|hypothetical-protein
MSEIAEKPLITRVAPLERIYYCASRAEGLKPDRHEIRMQSQFLLLGVIWLPPALAMAELERLLKGYDADHSRLLENVLETAHQQFLKFCEPQKREGGGVENHVECPRQDDALQCLRFMSTRYALAVDLCAAYVCSRYGR
>NZ_CP029690.1|WP_000178072.1|166966_167671_+|hypothetical-protein
MTMKNTVIPTVTENEMGEVITRHSAYGLVSVSRTSTTGQRLYASDLSHKEVVTMTFSESEQIERDGVIRHRLAEGRRRSPLLQVSLSPAQWATMITSFGMSDGVPCTINSLIRGDYERQPEIGYIESTRERYERQIREAAEREMAKLHEKLEVLRLLAVKGKAGKRELDEAYQSLLSVINNLPVNLAFTNQLIQESMVNIVSHGKAELEATAMGVAARLGMKEMSSLASLEEKK
>NZ_CP029690.1|WP_001395483.1|166475_166739_+|hypothetical-protein
MTNANANDGKTSPVLPTLEQVYALLKANYKPARFADRDGEIWGHEYSWNLARSSLQDLEKYGKSYVSKHSDRMGDGFSFGPDLVIIR
>NZ_CP029690.1|WP_000704115.1|176150_176666_-|hypothetical-protein
MKISTGMMKSNAPLIILICLMIAFSAYVKSWSLLYTLLAASVSLTVMISLPFIVSPLQHSKFIALRILRLLVITLWTIGLVGVFFSVVERLVWVNADSYPAWLAKELDSPAITDGENFIKATESFEKICGKNKGYLSVVTKHNGIFMRCDDSLSFDSWWKGVYRLKTPETR
>NZ_CP029690.1|WP_001226764.1|177316_179773_-|DUF4165-domain-containing-protein
MRKILTGCIIATAIASVYPAAAQIFSYSYTDTNQLAKTLKPATQSYLNPASTMTLNLISGLDRYERVSVTRDSDKKVMYSAVTGKISVADRIVAADGTEYYGKDLALPALGEGAFTVINDTLDLQQAVVSSSTYHFTIDTTAPKYTSIYPSQNAGYEMVLSGPVWGLGRGGSGQFSIFADGVDDANGIDKIRLVIKRGNGTVVSDNTLSYDTAAKRAFYPWIKDSVTQPGMPTSDLNEEFTFNFIITDKAGNTLNIPPQRFLFDDQIGEYTPFAVHDSRVSTSVVPGISSGYVPFVRGLSVLENPYRMVIRIPRTNWKPYRNGGITILNNYGGAKVISEDTTYVYVEVKLPQGALDINYYRPVNTYQWSGGDLTQYASWLNWDPASVKSPAWGSPAIERQMSDGTWFNSVNWKYFKASDMPVNLTQIRFNVQARPYDQKITGGATCNIPAGSTSCTVALTQAITNGTTGYLHSGYEVRSTTESTFFMPIWENVVWHTLGPSVTGYDYNDTTNILQVYINQPGDGSYFDTVKLSRVWLSDKSRNNADINVTGTLTGRNTATGNYTYEFNLKLIPEGSYNVQLNAQDSFNNTGSLDYKTVTVDNTPPSISISYETKPITSSVTVYGLENIRIQLADTLTKPSLTRMTLRGGPVSDAVELSWVNLGNNLYAPNYPKIFPSLNDGETYTLTVQAKDEMNNVKESAVEFSYLPNNLVRLENLKTISVSTALKTSDDTPLAVLYASQLRKKDGSIATGKQDAILTVRKDAAFGVTVNGVSAAPGESKNVQLDLGLGDSRSFPIFPSTSGVVGTSEFMLNIEELK
>NZ_CP029690.1|WP_001277090.1|180409_182086_-|DUF4942-domain-containing-protein
MSAVESDSLPMGAPGSSLVAYMPHTGLLINDDNFLPEMREELDVINRQVESYNDELSLLRSMSAQFLKCGNQKLYSYLSGYNHLISEADASYAENALRSEYWKRVMALTDVLSVMSDEKKKEWDKQFTADRYHLPPQEIPDFTLDAVVTTVVALLNDRHQFIKDRVYAVFQSLSRQHKTNKAFGFSTRMITSGVCEGVKDKWVKLKVEFKESGLMPLSELRVICSYFRGETVKPVYDTKKMVENMVGHVGFRNWISLDGNSIRFRVYKNGSMHIDVHPDIAERLNNILAAIVPLALPAERVAHTKATLQEFPALKRCIDFHSRMQLAELDFTQNEKEWSSWTSLGYAGENADKTRQVNADVLRFLGARVTSYHVTFDYDPTEVMRFIGHMGAMPDIKSHQFYPSSARLSEYVASIIAAGEGERLLEPNIGHGDLLQCFPKSVNVTGIELDTLNCLVSRAKGYETTEADFLAWSAANQIQKFDCVVMNPPFADNRAKLHLLAAASHLVPGGRLAAVLPLSLQGIDNLLGEGFRTEWMDTFDNEFDNTAVSVRVLYAERF
>NZ_CP029690.1|WP_001281654.1|182349_183507_-|DNA-binding-protein
MSDLMTDSQQQTNSRVFKSPLVSFSTVTGSGRFVSGMKQFRDANPDLCNEVTEQKAWAISPTVVQITEGFNSREMGMGEAYYQLPEVADHLNNIKNAYIRGDYVDPIRVLIKDGIPYVRQGHCRLKAALMAVAEGHSNLTILCIEMKADEISCELTTIDGNRGLALSPVALGESYRRLQALGGWSLDRIAEREGKSNTTIAALIRLTGCCVYLKKLIHADAISYVAVLSLIDEFGETEAVARIEKMIADLEKADSSGIQIKKTPRGQIRVVPSDFKPARVPPVLATKAVEGVKLITTSLLQKLGDIELPEVTDSSEDEEITFTLNRSMLEMLKNLQSEITESENKQLRRAENRQARLKGEKVTYKTKKNDKNGGEPQSETPPAQA
>NZ_CP029690.1|WP_032351497.1|183866_184691_+|Dam-family-site-specific-DNA-(adenine-N6)-methyltransferase
MRKHTPIIKWAGGKTKLMPFLSKHFPHDKSRRWVEPFIGGGAVFLNMFATEALLADSNPDLINLYRNIQRNKPAFIREVQLLAERHFEEEDYYVLRNTFNSTSFDDAPLQRATIFYAMNRLGYNGLCRYNLKRKFSVPWGKRYQFSLDIQKVDYLSFRLSSVELKTADFGQTLEFAGGGDQIYCDPPYDKISKTSFVSYDGIPFDKSAHVKLADMLVDANRKGASVAISNSMTPFTLELYEERGFDIHTHNAYRSVGSQSKSRKKEIEILAVLR
>NZ_CP029690.1|WP_001178650.1|184705_185527_-|hypothetical-protein
MQNDLGLGFIRKSARTSAKIISRKVTFPLDDLDNAKLTLTGLQCHPSCRFPFYQLSMLIHNQLAEHGVISADENAPFTVSISIHEWLSRARVAFIDYHGLRNSDKTVMITRAHLEELLTYLSTTLAVYVPYSKKRLNFSFLTSFTLVKTSQSYTLTFPGVLRPFLMLLGGLIQEFMTEKLLKRRNAQFVIFDYLRKSRRHSHKITDIVNDLQLHTVNVRIMNVLTQLADQGFISFICEGKRGERSIEELQFIPYASRDHSEVLSFEEWISPID
>NZ_CP029690.1|WP_000682872.1|185809_186517_-|hypothetical-protein
MKHSLFFTQDGYLLPSSVKPIYGKDGHYYAVITRECFECGGTGKIANAVCVTCNGSKTSPATEEKLVLKECIEFLETIPELRCNPDLEAWKRRHSEQLALLQADNSKFAASIAQQLNNNLFLTVRQLESFYSTYQPVSEAFSENAGFPIEHSFNIGDVVSFDIIFTEVRAAFSKGSHSYFFTFTGKKQNDGFALTGNVQDHVLLGHSYHLSGKVRKIHYFDSVPYALLTVFKLTA
>NZ_CP029690.1|WP_000357614.1|186513_186714_-|hypothetical-protein
MDKIAQFTVINTYNDLLITKGTLDRNIEEIKAGKRFDHFEEGHDQYVQKVTDALQLVEARLENLKK
>NZ_CP029690.1|WP_001015069.1|186731_187808_-|hypothetical-protein
MNHCDYQIIEISPKALFIESGFNPREAVIGELCYEQEPVKSTIVSIKQAYKEGRRVDLIKVVKKDSNYVVRQGHCRYRALSLALAEGADIQLISVVVMNYKNKSEEYLENLDGNRNNGLNPVALAYALAEALKLGSTVESLAMRYQRSSTAIRNQLKILDMPLELQRLISLNLIKKTLAIEIMLKYSNDHAKVLAHLESCSLLVPSTEPEPVLSKTSSVQTSSNDEKLDNPETLPVHVIPKEVKTKSITRSSLGIKRLSHKKTERLKTEFIGLIDTVRPALNDSNKLTELIFDGQHSNLFTNISSTSITKTTESVKITLDEAKLQLLLSLLNDENTAIIIPKSKVTELHEIRDLLTSE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	81476-81526	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	182983-183033	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	180762-180812	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	96276-96326	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	235796-235846	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	42635-42685	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	152742-152792	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	142863-142913	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	133710-133760	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	117174-117224	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	192529-192579	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	11544-11594	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MN232190	Escherichia coli plasmid pGD27-31, complete sequence	77135-77185	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	247816-247866	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	175824-175874	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	29608-29658	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	195030-195080	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	160405-160455	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	229056-229106	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	1240-1290	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	150895-150945	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	222888-222938	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	157698-157748	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	163625-163675	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	139403-139453	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	103197-103247	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_002305	Salmonella typhi plasmid R27, complete sequence	54047-54097	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	156262-156312	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	114948-114998	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	99282-99332	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	190141-190191	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	186842-186892	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	163174-163224	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	95412-95462	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	154888-154938	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	135342-135392	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	101555-101605	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	111577-111627	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	163625-163675	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	192086-192136	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	157699-157749	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	237889-237939	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	79517-79567	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	27631-27681	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	106159-106209	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	267735-267785	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	173816-173866	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	95376-95426	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	230101-230151	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	20571-20621	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	1141-1191	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	259337-259387	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	210872-210922	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	110178-110228	1.0
NZ_CP029690_1	1.1\|175824\|51\|NZ_CP029690\|PILER-CR	175824-175874	51	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	111658-111708	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	42568-42614	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	152675-152721	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	142796-142842	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	133643-133689	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	117107-117153	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	192462-192508	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	11477-11523	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	150828-150874	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	163558-163604	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	139336-139382	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	103130-103176	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_002305	Salmonella typhi plasmid R27, complete sequence	53980-54026	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	190074-190120	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	154821-154867	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	135275-135321	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	101488-101534	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	163558-163604	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	79450-79496	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	230034-230080	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	110111-110157	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	81547-81593	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	183054-183100	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	180833-180879	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	96347-96393	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	235867-235913	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MN232190	Escherichia coli plasmid pGD27-31, complete sequence	77206-77252	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	247887-247933	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	175895-175941	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	29679-29725	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	195101-195147	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	160476-160522	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	229127-229173	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	1311-1357	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	222959-223005	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	157769-157815	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	156333-156379	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	115019-115065	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	99353-99399	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	186913-186959	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	163245-163291	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	95483-95529	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	111648-111694	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	192157-192203	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	157770-157816	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	237960-238006	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	27702-27748	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	106230-106276	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	267806-267852	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	173887-173933	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	95447-95493	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	20642-20688	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	1212-1258	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	259408-259454	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	210943-210989	1.0
NZ_CP029690_1	1.2\|175895\|47\|NZ_CP029690\|PILER-CR	175895-175941	47	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	111729-111775	1.0

1. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

2. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

3. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

4. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

5. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

6. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

7. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

8. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

9. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

10. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

11. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

12. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

13. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

14. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

15. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

16. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

17. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

18. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

19. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

20. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

21. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

22. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

23. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

24. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

25. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

26. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

27. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

28. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

29. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

30. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

31. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

32. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

33. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

34. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

35. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

36. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

37. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

38. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

39. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

40. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

41. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

42. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

43. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

44. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

45. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

46. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

47. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

48. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

49. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

50. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

51. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

52. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

53. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

54. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

55. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

56. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

57. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

58. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

59. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

60. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

61. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

62. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

63. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

64. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

65. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

66. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

67. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

68. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

69. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

70. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

71. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

72. spacer 1.1|175824|51|NZ_CP029690|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	CRISPR spacer
gagaactactgctaatcggttaccgggaatgtggtggtactgggtggaaag	Protospacer
***************************************************

73. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

74. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

75. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

76. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

77. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

78. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

79. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

80. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

81. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

82. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

83. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

84. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

85. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

86. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

87. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

88. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

89. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

90. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

91. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

92. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

93. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

94. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

95. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

96. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

97. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

98. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

99. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

100. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

101. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

102. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

103. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

104. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

105. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

106. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

107. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

108. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

109. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

110. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

111. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

112. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

113. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

114. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

115. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

116. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

117. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

118. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

119. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

120. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

121. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

122. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

123. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

124. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

125. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

126. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

127. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

128. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

129. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

130. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

131. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

132. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

133. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

134. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

135. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

136. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

137. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

138. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

139. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

140. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

141. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

142. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

143. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

144. spacer 1.2|175895|47|NZ_CP029690|PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	CRISPR spacer
cgtggcagtgtcatctttccggatagcatgacgtcacggttaggaaa	Protospacer
***********************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

38083 : 79881

Escherichia_phage(40.0%)

integrase,transposase

attL 59770:59786|attR 90135:90151

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085948178.1\|38083_39296_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000045554.1\|40113_40989_+	hypothetical protein	NA	NA	NA	NA
WP_000120823.1\|41047_41425_+	hypothetical protein	NA	NA	NA	NA
WP_000810456.1\|41485_42472_+	hypothetical protein	NA	NA	NA	NA
WP_000180136.1\|42531_43584_+	AAA domain-containing protein	NA	NA	NA	NA
WP_000129110.1\|43622_43892_+	hypothetical protein	NA	NA	NA	NA
WP_000143798.1\|43962_45090_+	DUF3150 domain-containing protein	NA	NA	NA	NA
WP_000667080.1\|45167_47180_+	VWA domain-containing protein	NA	NA	NA	NA
WP_000192122.1\|47251_47473_+	hypothetical protein	NA	NA	NA	NA
WP_001113001.1\|47566_48820_+	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	3.0e-12	29.7
WP_001019609.1\|49094_49619_+	hypothetical protein	NA	NA	NA	NA
WP_032351467.1\|49696_50575_+	hypothetical protein	NA	NA	NA	NA
WP_000691116.1\|50645_51581_+	hypothetical protein	NA	NA	NA	NA
WP_000644670.1\|51658_52579_+	hypothetical protein	NA	NA	NA	NA
WP_032351466.1\|52651_53587_+	hypothetical protein	NA	NA	NA	NA
WP_000185349.1\|53763_54720_+	hypothetical protein	NA	NA	NA	NA
WP_001111914.1\|55132_55402_+	hypothetical protein	NA	NA	NA	NA
WP_032351465.1\|55456_56047_+	hypothetical protein	NA	NA	NA	NA
WP_000072212.1\|56054_56312_+	hypothetical protein	NA	NA	NA	NA
WP_032351464.1\|56385_56922_+	hypothetical protein	NA	NA	NA	NA
WP_085948178.1\|57016_58230_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000232334.1\|58314_58707_+	hypothetical protein	NA	NA	NA	NA
WP_000550467.1\|58924_59200_+	hypothetical protein	NA	NA	NA	NA
WP_000135563.1\|59288_60248_+	DNA replication terminus site-binding protein	NA	NA	NA	NA
59770:59786	attL	NA	NA	NA	NA
WP_001198597.1\|60258_61167_+	hypothetical protein	NA	NA	NA	NA
WP_000418845.1\|61102_61447_+	hypothetical protein	NA	NA	NA	NA
WP_001086279.1\|61471_62653_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001324690.1\|62867_63080_+	hypothetical protein	NA	NA	NA	NA
WP_001356349.1\|63386_63662_+\|transposase	transposase	Q71TE9	Escherichia_phage	5.0e-45	97.8
WP_162616904.1\|63706_63841_+	hypothetical protein	Q71TF0	Escherichia_phage	3.8e-14	100.0
WP_000055351.1\|63837_64083_+\|transposase	IS1 family transposase	U5P0U6	Shigella_phage	2.5e-40	100.0
WP_000807689.1\|64664_65420_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	1.9e-134	94.8
WP_001232452.1\|66904_67978_+	hypothetical protein	NA	NA	NA	NA
WP_077870188.1\|68234_68723_-	hypothetical protein	NA	NA	NA	NA
WP_000341067.1\|69380_69773_+	hypothetical protein	NA	NA	NA	NA
WP_000493077.1\|70185_70389_+	hypothetical protein	NA	NA	NA	NA
WP_001255860.1\|70543_71749_+	hypothetical protein	NA	NA	NA	NA
WP_000778959.1\|71918_72410_+	hypothetical protein	NA	NA	NA	NA
WP_001209044.1\|72848_73655_+	HNH endonuclease	G0X580	Salmonella_phage	1.3e-13	37.9
WP_001178596.1\|73772_74180_+	hypothetical protein	NA	NA	NA	NA
WP_000097904.1\|74487_74937_+	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	4.9e-05	34.3
WP_001287388.1\|75702_76107_-	H-NS histone family protein	NA	NA	NA	NA
WP_016695105.1\|76368_76641_-	hypothetical protein	NA	NA	NA	NA
WP_000480968.1\|77005_77842_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|77841_78645_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_085959879.1\|78751_79881_-\|transposase	IS3-like element IS1133 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-52	41.1
90135:90151	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP029691

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2288 : 65758

Escherichia_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000937595.1\|2288_3476_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000091308.1\|3475_3841_-	hypothetical protein	NA	NA	NA	NA
WP_000997720.1\|3875_4130_-	hypothetical protein	NA	NA	NA	NA
WP_001034091.1\|4636_8602_-	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	1.1e-230	39.9
WP_085952195.1\|8921_10135_-\|transposase	IS3 family transposase	A0A0N7C035	Escherichia_phage	2.2e-169	100.0
WP_001172748.1\|11160_11550_+	cytochrome b562 family protein	NA	NA	NA	NA
WP_000445936.1\|12509_12905_-	plasmid stabilization protein	NA	NA	NA	NA
WP_000921961.1\|12904_13864_-	plasmid stabilization protein	A0A222YXF2	Escherichia_phage	6.0e-61	40.6
WP_077629034.1\|14136_15039_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000086162.1\|15423_15795_+	restriction endonuclease subunit M	A0A2I7RE86	Vibrio_phage	1.4e-10	33.9
WP_000937595.1\|15901_17089_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000091308.1\|17088_17454_-	hypothetical protein	NA	NA	NA	NA
WP_072106536.1\|17826_18129_+	antirestriction protein	NA	NA	NA	NA
WP_000271680.1\|18175_18598_+	DUF1380 family protein	NA	NA	NA	NA
WP_001027516.1\|18594_18786_+	hypothetical protein	NA	NA	NA	NA
WP_013279293.1\|19061_19286_-	hypothetical protein	NA	NA	NA	NA
WP_000218642.1\|19823_20054_+	hypothetical protein	NA	NA	NA	NA
WP_000170683.1\|20105_21467_+	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_071600428.1\|22227_22488_+	hypothetical protein	NA	NA	NA	NA
WP_032175643.1\|22538_22733_+	hypothetical protein	NA	NA	NA	NA
WP_000290792.1\|22960_23488_+	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	4.6e-47	54.1
WP_000006004.1\|23543_23777_+	DUF905 domain-containing protein	A0A096XUX0	Cronobacter_phage	3.9e-06	51.1
WP_001145472.1\|23835_25794_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	6.6e-22	29.9
WP_000845949.1\|25848_26283_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001276234.1\|26279_26999_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001299721.1\|27010_27199_-	hypothetical protein	NA	NA	NA	NA
WP_001312861.1\|27278_27437_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_001427866.1\|27790_28015_-	hypothetical protein	NA	NA	NA	NA
WP_032351767.1\|27937_28126_+	hypothetical protein	NA	NA	NA	NA
WP_000107535.1\|28358_28646_+	hypothetical protein	NA	NA	NA	NA
WP_001234469.1\|28766_29588_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	4.4e-44	38.2
WP_001151524.1\|30807_31191_+	relaxosome protein TraM	NA	NA	NA	NA
WP_000283394.1\|31377_32067_+	conjugal transfer transcriptional regulator TraJ	NA	NA	NA	NA
WP_001309237.1\|32165_32561_+	conjugal transfer relaxosome protein TraY	NA	NA	NA	NA
WP_000994781.1\|32593_32953_+	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA
WP_000012104.1\|32967_33279_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_000399800.1\|33300_33867_+	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
WP_072095570.1\|33877_34582_+	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_000146670.1\|34581_36009_+	conjugal transfer protein TraB	NA	NA	NA	NA
WP_000002783.1\|35998_36589_+	conjugal transfer protein TraP	NA	NA	NA	NA
WP_001369729.1\|36575_36698_+	DUF2689 domain-containing protein	NA	NA	NA	NA
WP_085948178.1\|38479_39693_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000628099.1\|41409_41919_+	conjugal transfer entry exclusion protein TraS	NA	NA	NA	NA
WP_000850424.1\|41932_42664_+	complement resistance protein TraT	NA	NA	NA	NA
WP_001369365.1\|42916_45070_+	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_000986985.1\|45069_50340_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
WP_000205714.1\|50359_51106_+	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	7.1e-09	30.9
WP_000704529.1\|51164_52025_+	alpha/beta hydrolase	A2RQC8	Archaeal_BJ1_virus	9.7e-10	23.5
WP_000139321.1\|52127_52688_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_001171554.1\|52837_53218_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
WP_000998093.1\|53612_55151_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.8e-299	99.6
WP_001213544.1\|55969_57409_-	enterohemolysin T1SS ABC transporter subunit EhxD	NA	NA	NA	NA
WP_000987096.1\|57412_59533_-	enterohemolysin T1SS ABC transporter permease/ATPase EhxB	W8CYL7	Bacillus_phage	1.6e-45	30.2
WP_032350743.1\|59582_62579_-	enterohemolysin EhxA	NA	NA	NA	NA
WP_000839950.1\|62580_63096_-	enterohemolysin-activating lysine-acyltransferase EhxC	NA	NA	NA	NA
WP_000091308.1\|64205_64571_+	hypothetical protein	NA	NA	NA	NA
WP_000937595.1\|64570_65758_+\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP029692

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP029690

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP029691

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection