CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP020025	Escherichia coli strain WB61 chromosome, complete genome	3 crisprs	DEDDh,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	4	26	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020025_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020025_1

1608959-1609106

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP020025_1

>merge|NZ_CP020025|1|1608959-1609106|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAAGGAACAATCTTGCAAAGGCTGTGAAAGTTGGCGTTCACTGCCGTACAGGCAGCTTAGAAATTCACTGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGGCAGATAAAATG

>NZ_CP020025|1|1|1608959-1609106|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	GGAACAATCTTGCAAAGGCTGTGAAAGTTGGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTCACTGGTAACATACTCCACCCGCCCACCAT
GTTCACTGCCGTACAGGCAGATAAAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020025.1\|WP_022645455.1\|1616489_1620560_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP020025.1\|WP_000410785.1\|1605569_1605794_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP020025.1\|WP_001475185.1\|1620718_1621330_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP020025.1\|WP_000488716.1\|1598555_1599251_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP020025.1\|WP_001202192.1\|1610740_1612462_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP020025.1\|WP_022645453.1\|1609994_1610699_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP020025.1\|WP_077516218.1\|1597198_1598098_-\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP020025.1\|WP_000599806.1\|1599676_1601335_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP020025.1\|WP_001043590.1\|1612462_1614229_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP020025.1\|WP_000886683.1\|1622774_1624067_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP020025.1\|WP_000228473.1\|1615860_1616355_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP020025.1\|WP_001040187.1\|1609491_1609710_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP020025.1\|WP_001400542.1\|1601331_1602288_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP020025.1\|WP_000520781.1\|1606116_1606437_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP020025.1\|WP_022645444.1\|1603550_1605497_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP020025.1\|WP_022645440.1\|1595403_1597056_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP020025.1\|WP_000537432.1\|1614351_1615317_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP020025.1\|WP_000746460.1\|1602438_1603554_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP020025.1\|WP_000067755.1\|1621340_1622684_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP020025.1\|WP_000934041.1\|1606467_1608744_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828

Protein	Function_ID	Function_description	E-value
NZ_CP020025.1\|WP_022645455.1\|1616489_1620560_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP020025.1\|WP_000410785.1\|1605569_1605794_-\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP020025.1\|WP_001475185.1\|1620718_1621330_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	2.06927e-125
NZ_CP020025.1\|WP_000488716.1\|1598555_1599251_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
NZ_CP020025.1\|WP_001202192.1\|1610740_1612462_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP020025.1\|WP_022645453.1\|1609994_1610699_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.78168e-138
NZ_CP020025.1\|WP_077516218.1\|1597198_1598098_-\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.57924e-116
NZ_CP020025.1\|WP_000599806.1\|1599676_1601335_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP020025.1\|WP_001043590.1\|1612462_1614229_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP020025.1\|WP_000886683.1\|1622774_1624067_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP020025.1\|WP_000228473.1\|1615860_1616355_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP020025.1\|WP_001040187.1\|1609491_1609710_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP020025.1\|WP_001400542.1\|1601331_1602288_-\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	1.4029e-131
NZ_CP020025.1\|WP_000520781.1\|1606116_1606437_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP020025.1\|WP_022645444.1\|1603550_1605497_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP020025.1\|WP_022645440.1\|1595403_1597056_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP020025.1\|WP_000537432.1\|1614351_1615317_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP020025.1\|WP_000746460.1\|1602438_1603554_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP020025.1\|WP_000067755.1\|1621340_1622684_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP020025.1\|WP_000934041.1\|1606467_1608744_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0

>NZ_CP020025.1|WP_000934041.1|1606467_1608744_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP020025.1|WP_000520781.1|1606116_1606437_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP020025.1|WP_000410785.1|1605569_1605794_-|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP020025.1|WP_022645444.1|1603550_1605497_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVSNPPAIEKVNVAGGTEPVVNTASGWRQFASGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP020025.1|WP_000746460.1|1602438_1603554_+|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP020025.1|WP_001400542.1|1601331_1602288_-|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>NZ_CP020025.1|WP_000599806.1|1599676_1601335_+|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP020025.1|WP_000488716.1|1598555_1599251_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>NZ_CP020025.1|WP_077516218.1|1597198_1598098_-|L-lysine-exporter-LysO
MFSGLLIILVPLILGYLIPLRQKAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNYHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVTVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP020025.1|WP_022645440.1|1595403_1597056_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIVLREALKAQCLAVDANAHVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETSKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>NZ_CP020025.1|WP_001040187.1|1609491_1609710_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP020025.1|WP_022645453.1|1609994_1610699_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWCEDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNKFWVPRCLFSPQE
>NZ_CP020025.1|WP_001202192.1|1610740_1612462_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEATLRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP020025.1|WP_001043590.1|1612462_1614229_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGIDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP020025.1|WP_000537432.1|1614351_1615317_-|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP020025.1|WP_000228473.1|1615860_1616355_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP020025.1|WP_022645455.1|1616489_1620560_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEEDESHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPTQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPVQQPYYAPAPEQSAQQPYYAPAPEQSVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSAGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFTLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPIAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP020025.1|WP_001475185.1|1620718_1621330_+|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATAIWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP020025.1|WP_000067755.1|1621340_1622684_+|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP020025.1|WP_000886683.1|1622774_1624067_+|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Crispr_ID: NZ_CP020025_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020025_2

3482373-3483195

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

13 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP020025_2

>merge|NZ_CP020025|2|3482373-3483195|CRISPRCasFinder,CRT,PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTCGCCGGAAAATATTCATGATGGGGGTGGTTATGGCGGTTTATCCCCGCTGGCGCGGGGAACTCGGGGCCGCCGTGTTCACATTTGCCTAATTTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCAACATGTCTTTCGTCAATTTTGGCGCTATAAACGGTTTATCCCCGCTGGCGCGGGGAACTCTATATAAACGAGGTGAATTTATGGAAACTGTACGGTTTATCCCCGCTGGCGCGGGGAACTCGTTAGTTTTCTGAAAAAATTGTTTTCTTACGCTGGTTTATCCCCGCTGGCGCGGGGAACTCAATATTGTCGTGGACAAATGCCGGTGTTATTGCGGTTTATCCCCGCTGGCGCGGGGAACTCTTCGAGACACTTCTCTGCAAAATTAATGAAATCGGTTTATCCCCGCTGGCGCGGGGAACTCCAGGTATCAAGAAATAATCGAAGTCTTCATGACGGTTTATCCCCGCTGGCGCGGGGAACTCCGACGTTCGACGAAATGCGCGATGGCGGTCGGCGGTTTATCCCCGCTGGCGCGGGGAACTCTCTAAAAGTATACATTTGTTCTTAAAGCATTTTTTYTTATCCCCGCTGGCGCGGGGAACTCTTCGAGACACTTCTCTGCAAAATTAATGAAATCGGTTTATCCCCGCTGGCGCGGGGAACTCCAGGTATCAAGAAATAATCGAAGTCTTCATGACGGTTTATCCCCGCTGGCGCGGGGAACTCCGACGTTCGACGAAATGCGCGATGGCGGTCGGCGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP020025|2|2|3482373-3483195|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGGAAAATATTCATGATGGGGGTGGTTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGGGCCGCCGTGTTCACATTTGCCTAATTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AACATGTCTTTCGTCAATTTTGGCGCTATAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TATATAAACGAGGTGAATTTATGGAAACTGTA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GTTAGTTTTCTGAAAAAATTGTTTTCTTACGC
TGGTTTATCCCCGCTGGCGCGGGGAACTC	AATATTGTCGTGGACAAATGCCGGTGTTATTG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTCGAGACACTTCTCTGCAAAATTAATGAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CAGGTATCAAGAAATAATCGAAGTCTTCATGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGACGTTCGACGAAATGCGCGATGGCGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TCTAAAAGTATACATTTGTTCTTAAAGCATTT
TTTYTTATCCCCGCTGGCGCGGGGAACTC	TTCGAGACACTTCTCTGCAAAATTAATGAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CAGGTATCAAGAAATAATCGAAGTCTTCATGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGACGTTCGACGAAATGCGCGATGGCGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP020025|2|1|3482373-3483195|CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGGAAAATATTCATGATGGGGGTGGTTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGGGCCGCCGTGTTCACATTTGCCTAATTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AACATGTCTTTCGTCAATTTTGGCGCTATAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TATATAAACGAGGTGAATTTATGGAAACTGTA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GTTAGTTTTCTGAAAAAATTGTTTTCTTACGC
TGGTTTATCCCCGCTGGCGCGGGGAACTC	AATATTGTCGTGGACAAATGCCGGTGTTATTG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTCGAGACACTTCTCTGCAAAATTAATGAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CAGGTATCAAGAAATAATCGAAGTCTTCATGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGACGTTCGACGAAATGCGCGATGGCGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TCTAAAAGTATACATTTGTTCTTAAAGCATTT
TTTYTTATCCCCGCTGGCGCGGGGAACTC	TTCGAGACACTTCTCTGCAAAATTAATGAAAT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CAGGTATCAAGAAATAATCGAAGTCTTCATGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGACGTTCGACGAAATGCGCGATGGCGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP020025|2|1|3482374-3483195|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACTC	GCCGGAAAATATTCATGATGGGGGTGGTTATGGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	GGGGCCGCCGTGTTCACATTTGCCTAATTTCCC
GGTTTATCCCCGCTGGCGCGGGGAACTC	AACATGTCTTTCGTCAATTTTGGCGCTATAAAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TATATAAACGAGGTGAATTTATGGAAACTGTAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	GTTAGTTTTCTGAAAAAATTGTTTTCTTACGCT
GGTTTATCCCCGCTGGCGCGGGGAACTC	AATATTGTCGTGGACAAATGCCGGTGTTATTGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TTCGAGACACTTCTCTGCAAAATTAATGAAATC
GGTTTATCCCCGCTGGCGCGGGGAACTC	CAGGTATCAAGAAATAATCGAAGTCTTCATGAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	CGACGTTCGACGAAATGCGCGATGGCGGTCGGC
GGTTTATCCCCGCTGGCGCGGGGAACTC	TCTAAAAGTATACATTTGTTCTTAAAGCATTTT
TTYTTATCCCCGCTGGCGCGGGGAACTC	TTCGAGACACTTCTCTGCAAAATTAATGAAATC
GGTTTATCCCCGCTGGCGCGGGGAACTC	CAGGTATCAAGAAATAATCGAAGTCTTCATGAC
GGTTTATCCCCGCTGGCGCGGGGAACTC	CGACGTTCGACGAAATGCGCGATGGCGGTCGGC
GGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020025.1\|WP_022646037.1\|3485782_3486874_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP020025.1\|WP_022646040.1\|3492309_3493044_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP020025.1\|WP_022646039.1\|3489284_3491951_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP020025.1\|WP_105178427.1\|3485105_3485780_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP020025.1\|WP_022646032.1\|3478664_3480092_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP020025.1\|WP_000517476.1\|3477181_3477493_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP020025.1\|WP_000246131.1\|3476452_3477163_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP020025.1\|WP_022646035.1\|3483586_3484504_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP020025.1\|WP_000752798.1\|3486886_3487369_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP020025.1\|WP_000568962.1\|3474927_3475977_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP020025.1\|WP_022646033.1\|3481253_3482291_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP020025.1\|WP_001219242.1\|3475973_3476453_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP020025.1\|WP_001290706.1\|3493117_3494830_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP020025.1\|WP_022646034.1\|3483300_3483585_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP020025.1\|WP_001246104.1\|3477686_3478010_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP020025.1\|WP_022646038.1\|3487361_3488870_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP020025.1\|WP_000372392.1\|3480093_3481002_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP020025.1\|WP_001295182.1\|3474185_3474947_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP020025.1\|WP_000281399.1\|3484519_3485119_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP020025.1\|WP_001173673.1\|3478059_3478665_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661

Protein	Function_ID	Function_description	E-value
NZ_CP020025.1\|WP_022646037.1\|3485782_3486874_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	7.42279e-152
NZ_CP020025.1\|WP_022646040.1\|3492309_3493044_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.62447e-137
NZ_CP020025.1\|WP_022646039.1\|3489284_3491951_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP020025.1\|WP_105178427.1\|3485105_3485780_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.56276e-101
NZ_CP020025.1\|WP_022646032.1\|3478664_3480092_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP020025.1\|WP_000517476.1\|3477181_3477493_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP020025.1\|WP_000246131.1\|3476452_3477163_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.32778e-121
NZ_CP020025.1\|WP_022646035.1\|3483586_3484504_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.75252e-159
NZ_CP020025.1\|WP_000752798.1\|3486886_3487369_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.51297e-33
NZ_CP020025.1\|WP_000568962.1\|3474927_3475977_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP020025.1\|WP_022646033.1\|3481253_3482291_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP020025.1\|WP_001219242.1\|3475973_3476453_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP020025.1\|WP_001290706.1\|3493117_3494830_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP020025.1\|WP_022646034.1\|3483300_3483585_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.20986e-62
NZ_CP020025.1\|WP_001246104.1\|3477686_3478010_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP020025.1\|WP_022646038.1\|3487361_3488870_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP020025.1\|WP_000372392.1\|3480093_3481002_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP020025.1\|WP_001295182.1\|3474185_3474947_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP020025.1\|WP_000281399.1\|3484519_3485119_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
NZ_CP020025.1\|WP_001173673.1\|3478059_3478665_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148

>NZ_CP020025.1|WP_022646033.1|3481253_3482291_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRSKTPAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIILPLVKKLAKAS
>NZ_CP020025.1|WP_000372392.1|3480093_3481002_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP020025.1|WP_022646032.1|3478664_3480092_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLILIDRLSNVTVGAGMVHEPVSQATAAPSQFSVFELELNALVRRHFPHWGARDLLGDK
>NZ_CP020025.1|WP_001173673.1|3478059_3478665_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP020025.1|WP_001246104.1|3477686_3478010_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP020025.1|WP_000517476.1|3477181_3477493_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP020025.1|WP_000246131.1|3476452_3477163_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKHVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP020025.1|WP_001219242.1|3475973_3476453_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP020025.1|WP_000568962.1|3474927_3475977_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHSREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP020025.1|WP_001295182.1|3474185_3474947_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP020025.1|WP_022646034.1|3483300_3483585_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSARIREMIWEQISGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>NZ_CP020025.1|WP_022646035.1|3483586_3484504_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYVLLAKQYGVKWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP020025.1|WP_000281399.1|3484519_3485119_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP020025.1|WP_105178427.1|3485105_3485780_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCKASDPQKALFNYEPVGGDIYSEESVTGHYLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP020025.1|WP_022646037.1|3485782_3486874_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKLVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA
>NZ_CP020025.1|WP_000752798.1|3486886_3487369_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP020025.1|WP_022646038.1|3487361_3488870_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGEVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVCGIDLRSTVLLNVLTIPRLQKQFPNELHTENQPTWVKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANINFSQADEVIADLRDKLHQLCEMLFNQSEAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP020025.1|WP_022646039.1|3489284_3491951_-|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWEQSVVLQNAFCQNEMLSKQMVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSPGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFKEDAPSNINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPEENNSAYPLINWRGVNGAQRFDLLAHSEQLPPRFSIRPEPIYLADMLPDLRMLERMIVAANAGAQVCLICNLVDVAQLCHQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEVPLASVLLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKYESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYLQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRNFSEVVDEDGVLWLEGKQNQDGWIWQGNNIVITYTRDEGMTRVIPANPK
>NZ_CP020025.1|WP_022646040.1|3492309_3493044_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWNNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP020025.1|WP_001290706.1|3493117_3494830_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD

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Crispr_ID: NZ_CP020025_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020025_3

3508742-3509993

Unclear

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

20 spacers

The CRISPR arrays of NZ_CP020025_3

>merge|NZ_CP020025|3|3508742-3509993|CRISPRCasFinder,CRT,PILER-CR
TGGTTCATCCCCGCTGGCGCGGGGAACACGTCCTGTTTTTGACCGGCGGTAAATGTTGCCTGCGGTTTATCCCCGCTGGCGCGGGGAACACAATATCCGTTCCTCGCTCTGCGTTTTCGTTGACGGTTTATCCCCGCTGGCGCGGGGAACACGGTCGGGTATTTCATTATGCATCCTGAACTAACGGTTTATCCCCGCTGGCGCGGGGAACACTATGCGCTTGCTGCTGCGTTGATGTACGCGGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTAACTACCTGAACACCGGGAAGACTCCGGACCGGTTTATCCCCGCTGGCGCGGGGAACACGATTCAATGTCCGACGCATCCAAGTAAATATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGATGAGCAGGGAGCAACAAAAGTAGCCGGAATGGTTTATCCCCGCTGGCGCGGGGAACACCCATACATTAACACGGTGTGGCCACATTTCAACGGTTTATCCCCGCTGGCGCGGGGAACACGCGCGGCCGCGATATCGTTAGCACTGGCTCCCGCGGTTTATCCCCGCTGGCGCGGGGAACACAATTTTTCCAGTGGTGTCGTTGTAATTAAGGACGGTTTATCCCCGCTGGCGCGGGGAACACCCATACATTAACACGGTGTGGCCACATTTCAACGGTTTATCCCCGCTGGCGCGGGGAACACGCGCGGCCGCGATATCGTTAGCACTGGCTCCCGCGGTTTATCCCCGCTGGCGCGGGGAACACAATTTTTCCAGTGGTGTCGTTGTAATTAAGGACGGTTTATCCCCGCTGGCGCGGGGAACACAGGTTAAAGAGGCGCGCCGGGCGCTGGCTGGGCGGTTTATCCCCGCTGGCGCGGGGAACACATCCGTTAATTATTGAGAGAGCTATCAGCTATCGGTTTATCCCCGCTGGCGCGGGGAACACTCTAATTGCGCTTTGATAAATGGAGTTAAAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGACACCGCCGTTACGTCTGTGTCGCCAAGTTGCGGTTTATCCCCGCTGGCGCGGGGAACACGACCTCTTGCAATTCGTCGACCCRGGCCYGATAGGTTTATCCCCGCTGGCGCGGGGAACACCCAGGTCCCATTTGTCGATCGGCAGCGCCATTCGGTTTATCCCCGCTGGCGCGGGGAACACTGTTAATTCAGCAAGTTGAGATTGTGTCAGTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020025|3|3|3508742-3509993|CRISPRCasFinder
TGGTTCATCCCCGCTGGCGCGGGGAACAC	GTCCTGTTTTTGACCGGCGGTAAATGTTGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATATCCGTTCCTCGCTCTGCGTTTTCGTTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTCGGGTATTTCATTATGCATCCTGAACTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATGCGCTTGCTGCTGCGTTGATGTACGCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTAACTACCTGAACACCGGGAAGACTCCGGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATTCAATGTCCGACGCATCCAAGTAAATATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATGAGCAGGGAGCAACAAAAGTAGCCGGAA
TGGTTTATCCCCGCTGGCGCGGGGAACAC	CCATACATTAACACGGTGTGGCCACATTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCGGCCGCGATATCGTTAGCACTGGCTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCCAGTGGTGTCGTTGTAATTAAGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCATACATTAACACGGTGTGGCCACATTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCGGCCGCGATATCGTTAGCACTGGCTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCCAGTGGTGTCGTTGTAATTAAGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGTTAAAGAGGCGCGCCGGGCGCTGGCTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCCGTTAATTATTGAGAGAGCTATCAGCTAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTAATTGCGCTTTGATAAATGGAGTTAAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACACCGCCGTTACGTCTGTGTCGCCAAGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCTCTTGCAATTCGTCGACCCRGGCCYGAT
AGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGGTCCCATTTGTCGATCGGCAGCGCCATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTTAATTCAGCAAGTTGAGATTGTGTCAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020025|3|2|3508742-3509993|CRT
TGGTTCATCCCCGCTGGCGCGGGGAACAC	GTCCTGTTTTTGACCGGCGGTAAATGTTGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATATCCGTTCCTCGCTCTGCGTTTTCGTTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTCGGGTATTTCATTATGCATCCTGAACTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATGCGCTTGCTGCTGCGTTGATGTACGCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTAACTACCTGAACACCGGGAAGACTCCGGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATTCAATGTCCGACGCATCCAAGTAAATATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGATGAGCAGGGAGCAACAAAAGTAGCCGGAA
TGGTTTATCCCCGCTGGCGCGGGGAACAC	CCATACATTAACACGGTGTGGCCACATTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCGGCCGCGATATCGTTAGCACTGGCTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCCAGTGGTGTCGTTGTAATTAAGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCATACATTAACACGGTGTGGCCACATTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCGGCCGCGATATCGTTAGCACTGGCTCCCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCCAGTGGTGTCGTTGTAATTAAGGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGGTTAAAGAGGCGCGCCGGGCGCTGGCTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCCGTTAATTATTGAGAGAGCTATCAGCTAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTAATTGCGCTTTGATAAATGGAGTTAAAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACACCGCCGTTACGTCTGTGTCGCCAAGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCTCTTGCAATTCGTCGACCCRGGCCYGAT
AGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGGTCCCATTTGTCGATCGGCAGCGCCATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTTAATTCAGCAAGTTGAGATTGTGTCAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020025|3|2|3508743-3509993|PILER-CR
GGTTCATCCCCGCTGGCGCGGGGAACAC	GTCCTGTTTTTGACCGGCGGTAAATGTTGCCTGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	AATATCCGTTCCTCGCTCTGCGTTTTCGTTGAC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGTCGGGTATTTCATTATGCATCCTGAACTAAC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TATGCGCTTGCTGCTGCGTTGATGTACGCGGCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TTAACTACCTGAACACCGGGAAGACTCCGGACC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GATTCAATGTCCGACGCATCCAAGTAAATATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGATGAGCAGGGAGCAACAAAAGTAGCCGGAAT
GGTTTATCCCCGCTGGCGCGGGGAACAC	CCATACATTAACACGGTGTGGCCACATTTCAAC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCGGCCGCGATATCGTTAGCACTGGCTCCCGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCCAGTGGTGTCGTTGTAATTAAGGAC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CCATACATTAACACGGTGTGGCCACATTTCAAC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCGGCCGCGATATCGTTAGCACTGGCTCCCGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	AATTTTTCCAGTGGTGTCGTTGTAATTAAGGAC
GGTTTATCCCCGCTGGCGCGGGGAACAC	AGGTTAAAGAGGCGCGCCGGGCGCTGGCTGGGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	ATCCGTTAATTATTGAGAGAGCTATCAGCTATC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TCTAATTGCGCTTTGATAAATGGAGTTAAAGCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GACACCGCCGTTACGTCTGTGTCGCCAAGTTGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GACCTCTTGCAATTCGTCGACCCRGGCCYGATA
GGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGGTCCCATTTGTCGATCGGCAGCGCCATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGTTAATTCAGCAAGTTGAGATTGTGTCAGTCC
GGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020025.1\|WP_000226815.1\|3517003_3519238_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP020025.1\|WP_077516542.1\|3498649_3498910_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP020025.1\|WP_077516540.1\|3500505_3501285_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP020025.1\|WP_088129899.1\|3505321_3506599_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP020025.1\|WP_001199973.1\|3510332_3511004_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP020025.1\|WP_000021343.1\|3504217_3505003_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP020025.1\|WP_077516534.1\|3519285_3520587_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP020025.1\|WP_001130256.1\|3498926_3499502_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP020025.1\|WP_052925091.1\|3499648_3500509_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP020025.1\|WP_000210878.1\|3513614_3515252_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP020025.1\|WP_022646042.1\|3497387_3498659_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP020025.1\|WP_162543816.1\|3501262_3502672_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP020025.1\|WP_001071641.1\|3515479_3516271_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP020025.1\|WP_000254750.1\|3516342_3516678_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP020025.1\|WP_022646048.1\|3511297_3512170_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP020025.1\|WP_000036723.1\|3512229_3513528_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP020025.1\|WP_000059294.1\|3502693_3504148_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP020025.1\|WP_000581937.1\|3516677_3516926_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP020025.1\|WP_022646046.1\|3506625_3508104_+\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP020025.1\|WP_000186450.1\|3520643_3523400_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848

Protein	Function_ID	Function_description	E-value
NZ_CP020025.1\|WP_000226815.1\|3517003_3519238_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP020025.1\|WP_077516542.1\|3498649_3498910_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	7.56514e-41
NZ_CP020025.1\|WP_077516540.1\|3500505_3501285_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.3827e-59
NZ_CP020025.1\|WP_088129899.1\|3505321_3506599_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	4.01972e-29
NZ_CP020025.1\|WP_001199973.1\|3510332_3511004_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP020025.1\|WP_000021343.1\|3504217_3505003_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.87853e-139
NZ_CP020025.1\|WP_077516534.1\|3519285_3520587_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP020025.1\|WP_001130256.1\|3498926_3499502_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	1.33799e-87
NZ_CP020025.1\|WP_052925091.1\|3499648_3500509_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.45937e-87
NZ_CP020025.1\|WP_000210878.1\|3513614_3515252_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP020025.1\|WP_022646042.1\|3497387_3498659_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	3.94463e-124
NZ_CP020025.1\|WP_162543816.1\|3501262_3502672_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.99023e-50
NZ_CP020025.1\|WP_001071641.1\|3515479_3516271_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	6.52379e-160
NZ_CP020025.1\|WP_000254750.1\|3516342_3516678_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.22533e-74
NZ_CP020025.1\|WP_022646048.1\|3511297_3512170_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	2.57168e-95
NZ_CP020025.1\|WP_000036723.1\|3512229_3513528_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP020025.1\|WP_000059294.1\|3502693_3504148_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	5.69452e-82
NZ_CP020025.1\|WP_000581937.1\|3516677_3516926_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP020025.1\|WP_022646046.1\|3506625_3508104_+\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	8.58462e-109
NZ_CP020025.1\|WP_000186450.1\|3520643_3523400_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0

>NZ_CP020025.1|WP_022646046.1|3506625_3508104_+|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNEDSIQSWSNA
>NZ_CP020025.1|WP_088129899.1|3505321_3506599_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALGMVIIFTFLLFQKIRTADSAPAMASSK
>NZ_CP020025.1|WP_000021343.1|3504217_3505003_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGTAIFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP020025.1|WP_000059294.1|3502693_3504148_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNHLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFAHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP020025.1|WP_162543816.1|3501262_3502672_-|MFS-transporter
MTVRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFMLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFITESPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTIAAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP020025.1|WP_077516540.1|3500505_3501285_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGNIGPDVSLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEDAVLLETVADLRFAPEFVARHIAEWQRQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTENGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAAIIRKTVAVELPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP020025.1|WP_052925091.1|3499648_3500509_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTDKRPLCLSLARQAGADKNATLPSGMQQLNIVPGALPDWLVSLENLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVCNSKFVVAINHDASAAVFLQADVGVVDDWKAVLEALVTNIHADCQ
>NZ_CP020025.1|WP_001130256.1|3498926_3499502_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISHIVKKIKSAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP020025.1|WP_077516542.1|3498649_3498910_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTVQRLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDEKTLQQWRYPPSGFGITYRFG
>NZ_CP020025.1|WP_022646042.1|3497387_3498659_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTQALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRACYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLLGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSLRCL
>NZ_CP020025.1|WP_001199973.1|3510332_3511004_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP020025.1|WP_022646048.1|3511297_3512170_+|YgcG-family-protein
MRYFILIFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTRKLESIFNNTQVQIAVLIIPTTKDETIEQYATRVFNNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAIIALNNQLTSQHQYSANPSESESASSSDYYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSSVCISAIYLLDLFLFSDKTFSIAVFFFFFTFTTIMVFTCLCVLQKKASGRSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>NZ_CP020025.1|WP_000036723.1|3512229_3513528_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP020025.1|WP_000210878.1|3513614_3515252_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP020025.1|WP_001071641.1|3515479_3516271_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEAQQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP020025.1|WP_000254750.1|3516342_3516678_-|endoribonuclease-MazF
MVSRYVPDTGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP020025.1|WP_000581937.1|3516677_3516926_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP020025.1|WP_000226815.1|3517003_3519238_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP020025.1|WP_077516534.1|3519285_3520587_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILMPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLECFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLHNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP020025.1|WP_000186450.1|3520643_3523400_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP020025_2	2.10\|3482952\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482952-3482983	32	NZ_CP020025.1	3483196-3483227	0	1.0
NZ_CP020025_2	2.23\|3482952\|33\|NZ_CP020025\|PILER-CR	3482952-3482984	33	NZ_CP020025.1	3483196-3483228	0	1.0
NZ_CP020025_3	3.7\|3509138\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509138-3509169	32	NZ_CP020025.1	3529794-3529825	1	0.969
NZ_CP020025_3	3.27\|3509138\|33\|NZ_CP020025\|PILER-CR	3509138-3509170	33	NZ_CP020025.1	3529793-3529825	1	0.97

1. spacer 2.10|3482952|32|NZ_CP020025|CRISPRCasFinder,CRT matches to position: 3483196-3483227, mismatch: 0, identity: 1.0

tctaaaagtatacatttgttcttaaagcattt	CRISPR spacer
tctaaaagtatacatttgttcttaaagcattt	Protospacer
********************************

2. spacer 2.23|3482952|33|NZ_CP020025|PILER-CR matches to position: 3483196-3483228, mismatch: 0, identity: 1.0

tctaaaagtatacatttgttcttaaagcatttt	CRISPR spacer
tctaaaagtatacatttgttcttaaagcatttt	Protospacer
*********************************

3. spacer 3.7|3509138|32|NZ_CP020025|CRISPRCasFinder,CRT matches to position: 3529794-3529825, mismatch: 1, identity: 0.969

ggatgagcagggagcaacaaaagtagccggaa	CRISPR spacer
ggatgagcagggagcaacaaaagtagctggaa	Protospacer
***************************.****

4. spacer 3.27|3509138|33|NZ_CP020025|PILER-CR matches to position: 3529793-3529825, mismatch: 1, identity: 0.97

ggatgagcagggagcaacaaaagtagccggaat	CRISPR spacer
ggatgagcagggagcaacaaaagtagctggaat	Protospacer
***************************.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020025_2	2.4\|3482586\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482586-3482617	32	MF547662	Clostridioides phage LIBA6276, complete genome	37369-37400	4	0.875
NZ_CP020025_2	2.4\|3482586\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482586-3482617	32	MF547663	Clostridioides phage LIBA2945, complete genome	37369-37400	4	0.875
NZ_CP020025_2	2.4\|3482586\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482586-3482617	32	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	83504-83535	5	0.844
NZ_CP020025_2	2.17\|3482586\|33\|NZ_CP020025\|PILER-CR	3482586-3482618	33	MF547662	Clostridioides phage LIBA6276, complete genome	37368-37400	5	0.848
NZ_CP020025_2	2.17\|3482586\|33\|NZ_CP020025\|PILER-CR	3482586-3482618	33	MF547663	Clostridioides phage LIBA2945, complete genome	37368-37400	5	0.848
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1203814-1203845	6	0.812
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1167510-1167541	6	0.812
NZ_CP020025_2	2.10\|3482952\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482952-3482983	32	NC_005871	Photobacterium profundum SS9 plasmid pPBPR1, complete sequence	43289-43320	6	0.812
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1203814-1203845	6	0.812
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1167510-1167541	6	0.812
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1167509-1167541	6	0.818
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1167509-1167541	6	0.818
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1175642-1175673	7	0.781
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1175642-1175673	7	0.781
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1203814-1203846	7	0.788
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NC_031109	Gordonia phage Jumbo, complete genome	25391-25423	7	0.788
NZ_CP020025_2	2.23\|3482952\|33\|NZ_CP020025\|PILER-CR	3482952-3482984	33	NC_005871	Photobacterium profundum SS9 plasmid pPBPR1, complete sequence	43289-43321	7	0.788
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1203814-1203846	7	0.788
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NC_031109	Gordonia phage Jumbo, complete genome	25391-25423	7	0.788
NZ_CP020025_3	3.19\|3509872\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509872-3509903	32	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	373536-373567	7	0.781
NZ_CP020025_2	2.6\|3482708\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482708-3482739	32	NZ_CP008818	Ochrobactrum anthropi strain OAB plasmid 2, complete sequence	52227-52258	8	0.75
NZ_CP020025_2	2.6\|3482708\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482708-3482739	32	NC_009671	Ochrobactrum anthropi ATCC 49188 plasmid pOANT03, complete sequence	23638-23669	8	0.75
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NC_031109	Gordonia phage Jumbo, complete genome	25391-25422	8	0.75
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	398774-398805	8	0.75
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	565533-565564	8	0.75
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	63515-63546	8	0.75
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	350647-350678	8	0.75
NZ_CP020025_2	2.10\|3482952\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482952-3482983	32	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	22946-22977	8	0.75
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NC_031109	Gordonia phage Jumbo, complete genome	25391-25422	8	0.75
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	398774-398805	8	0.75
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	565533-565564	8	0.75
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	63515-63546	8	0.75
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	350647-350678	8	0.75
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1175641-1175673	8	0.758
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1175641-1175673	8	0.758
NZ_CP020025_3	3.4\|3508955\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3508955-3508986	32	MN855615	Siphoviridae sp. isolate 320, complete genome	7076-7107	8	0.75
NZ_CP020025_3	3.4\|3508955\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3508955-3508986	32	NC_034248	Rhizobium phage RHEph10, complete genome	31444-31475	8	0.75
NZ_CP020025_3	3.9\|3509260\|33\|NZ_CP020025\|CRISPRCasFinder,CRT	3509260-3509292	33	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	413541-413573	8	0.758
NZ_CP020025_3	3.10\|3509322\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509322-3509353	32	NC_013085	Synechococcus phage S-RSM4, complete genome	75536-75567	8	0.75
NZ_CP020025_3	3.10\|3509322\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509322-3509353	32	FM207411	Synechococcus phage S-RSM4 complete genome	75536-75567	8	0.75
NZ_CP020025_3	3.12\|3509444\|33\|NZ_CP020025\|CRISPRCasFinder,CRT	3509444-3509476	33	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	413541-413573	8	0.758
NZ_CP020025_3	3.13\|3509506\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509506-3509537	32	NC_013085	Synechococcus phage S-RSM4, complete genome	75536-75567	8	0.75
NZ_CP020025_3	3.13\|3509506\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509506-3509537	32	FM207411	Synechococcus phage S-RSM4 complete genome	75536-75567	8	0.75
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	405764-405795	8	0.75
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NZ_CP053710	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence	354033-354064	8	0.75
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NZ_CP053712	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence	91487-91518	8	0.75
NZ_CP020025_1	1.2\|1609047\|32\|NZ_CP020025\|CRISPRCasFinder	1609047-1609078	32	NZ_CP045060	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence	9736-9767	9	0.719
NZ_CP020025_1	1.2\|1609047\|32\|NZ_CP020025\|CRISPRCasFinder	1609047-1609078	32	NZ_CP045053	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence	9737-9768	9	0.719
NZ_CP020025_1	1.2\|1609047\|32\|NZ_CP020025\|CRISPRCasFinder	1609047-1609078	32	NZ_CP045057	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence	9736-9767	9	0.719
NZ_CP020025_2	2.4\|3482586\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482586-3482617	32	MN693584	Marine virus AFVG_25M163, complete genome	29591-29622	9	0.719
NZ_CP020025_2	2.4\|3482586\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482586-3482617	32	MN103543	Pseudomonas phage vB_PaeM_PS119XW, complete genome	258501-258532	9	0.719
NZ_CP020025_2	2.4\|3482586\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482586-3482617	32	MK599315	Pseudomonas phage PA1C, complete genome	257887-257918	9	0.719
NZ_CP020025_2	2.5\|3482647\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482647-3482678	32	MN812211	Flavobacterium phage vB_FspS_laban6-1, complete genome	21752-21783	9	0.719
NZ_CP020025_2	2.5\|3482647\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482647-3482678	32	NZ_CP012534	Psychrobacter sp. P11G5 plasmid pPspP11G5a, complete sequence	26937-26968	9	0.719
NZ_CP020025_2	2.7\|3482769\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482769-3482800	32	MT446414	UNVERIFIED: Escherichia virus TH43, complete genome	38100-38131	9	0.719
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	555186-555217	9	0.719
NZ_CP020025_2	2.9\|3482891\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482891-3482922	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	471692-471723	9	0.719
NZ_CP020025_2	2.11\|3483013\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483013-3483044	32	MT446414	UNVERIFIED: Escherichia virus TH43, complete genome	38100-38131	9	0.719
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	555186-555217	9	0.719
NZ_CP020025_2	2.13\|3483135\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3483135-3483166	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	471692-471723	9	0.719
NZ_CP020025_2	2.18\|3482647\|33\|NZ_CP020025\|PILER-CR	3482647-3482679	33	MN812211	Flavobacterium phage vB_FspS_laban6-1, complete genome	21752-21784	9	0.727
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	63515-63547	9	0.727
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	398773-398805	9	0.727
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	555185-555217	9	0.727
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	565532-565564	9	0.727
NZ_CP020025_2	2.23\|3482952\|33\|NZ_CP020025\|PILER-CR	3482952-3482984	33	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	22946-22978	9	0.727
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	63515-63547	9	0.727
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_CP050093	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence	398773-398805	9	0.727
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	555185-555217	9	0.727
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	565532-565564	9	0.727
NZ_CP020025_3	3.2\|3508833\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3508833-3508864	32	MK448690	Streptococcus phage Javan169, complete genome	9831-9862	9	0.719
NZ_CP020025_3	3.2\|3508833\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3508833-3508864	32	MK448854	Streptococcus phage Javan146, complete genome	11811-11842	9	0.719
NZ_CP020025_3	3.6\|3509077\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509077-3509108	32	NZ_CP016721	Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence	30466-30497	9	0.719
NZ_CP020025_3	3.6\|3509077\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509077-3509108	32	NZ_CP016727	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence	30464-30495	9	0.719
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	JX469828	Uncultured bacterium plasmid pRSB223, complete sequence	47585-47616	9	0.719
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	JX469829	Uncultured bacterium plasmid pB1, complete sequence	23183-23214	9	0.719
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	393203-393234	9	0.719
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NC_008766	Acidovorax sp. JS42 plasmid pAOVO02, complete sequence	3158-3189	9	0.719
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	569059-569090	9	0.719
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NZ_MN366361	Bacterium plasmid pALTS33, complete sequence	54575-54606	9	0.719
NZ_CP020025_3	3.24\|3508955\|33\|NZ_CP020025\|PILER-CR	3508955-3508987	33	MN855615	Siphoviridae sp. isolate 320, complete genome	7075-7107	9	0.727
NZ_CP020025_3	3.29\|3509260\|34\|NZ_CP020025\|PILER-CR	3509260-3509293	34	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	413540-413573	9	0.735
NZ_CP020025_3	3.32\|3509444\|34\|NZ_CP020025\|PILER-CR	3509444-3509477	34	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	413540-413573	9	0.735
NZ_CP020025_2	2.5\|3482647\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482647-3482678	32	NZ_KX711616	Bacillus subtilis strain 72 plasmid pBS72, complete sequence	1474-1505	10	0.688
NZ_CP020025_2	2.17\|3482586\|33\|NZ_CP020025\|PILER-CR	3482586-3482618	33	MN693584	Marine virus AFVG_25M163, complete genome	29590-29622	10	0.697
NZ_CP020025_2	2.22\|3482891\|33\|NZ_CP020025\|PILER-CR	3482891-3482923	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	471692-471724	10	0.697
NZ_CP020025_2	2.26\|3483135\|33\|NZ_CP020025\|PILER-CR	3483135-3483167	33	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	471692-471724	10	0.697
NZ_CP020025_3	3.14\|3509567\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3509567-3509598	32	NC_004929	Ruegeria sp. PR1b plasmid pSD20, complete sequence	67373-67404	10	0.688
NZ_CP020025_2	2.5\|3482647\|32\|NZ_CP020025\|CRISPRCasFinder,CRT	3482647-3482678	32	NC_023026	Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence	2981-3012	11	0.656

1. spacer 2.4|3482586|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 4, identity: 0.875

-tatataaacgaggtgaatttatggaaactgta	CRISPR spacer
ttttataag-gaggtgaatttatggaaacagta	Protospacer
 * *****. ******************* ***

2. spacer 2.4|3482586|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.875

-tatataaacgaggtgaatttatggaaactgta	CRISPR spacer
ttttataag-gaggtgaatttatggaaacagta	Protospacer
 * *****. ******************* ***

3. spacer 2.4|3482586|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

-tatataaacgaggtgaatttatggaaactgta	CRISPR spacer
ttttatagg-gaggtgaatttatggaaacagta	Protospacer
 * ****.. ******************* ***

4. spacer 2.17|3482586|33|NZ_CP020025|PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 5, identity: 0.848

-tatataaacgaggtgaatttatggaaactgtac	CRISPR spacer
ttttataag-gaggtgaatttatggaaacagtag	Protospacer
 * *****. ******************* ***

5. spacer 2.17|3482586|33|NZ_CP020025|PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 5, identity: 0.848

-tatataaacgaggtgaatttatggaaactgtac	CRISPR spacer
ttttataag-gaggtgaatttatggaaacagtag	Protospacer
 * *****. ******************* ***

6. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 6, identity: 0.812

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
cggcgttcgacgaactgcgcgatggccgcgtg	Protospacer
**.*********** *********** *.  *

7. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.812

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
caacgatggacgaaatgcgcgatggcgaacgc	Protospacer
*.*** * *******************. **

8. spacer 2.10|3482952|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_005871 (Photobacterium profundum SS9 plasmid pPBPR1, complete sequence) position: , mismatch: 6, identity: 0.812

tctaaaagtatacatttgttctta---aagcattt	CRISPR spacer
tctaaaagtatacacttgtttttattgaagaa---	Protospacer
**************.*****.***   *** *

9. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 6, identity: 0.812

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
cggcgttcgacgaactgcgcgatggccgcgtg	Protospacer
**.*********** *********** *.  *

10. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.812

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
caacgatggacgaaatgcgcgatggcgaacgc	Protospacer
*.*** * *******************. **

11. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.818

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
caacgatggacgaaatgcgcgatggcgaacgcc	Protospacer
*.*** * *******************. ** *

12. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.818

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
caacgatggacgaaatgcgcgatggcgaacgcc	Protospacer
*.*** * *******************. ** *

13. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.781

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
cagcgatggacgaaatgcgcgatggcgaacgc	Protospacer
*..** * *******************. **

14. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.781

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
cagcgatggacgaaatgcgcgatggcgaacgc	Protospacer
*..** * *******************. **

15. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.788

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
cggcgttcgacgaactgcgcgatggccgcgtga	Protospacer
**.*********** *********** *.  *

16. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NC_031109 (Gordonia phage Jumbo, complete genome) position: , mismatch: 7, identity: 0.788

cgacgttcgacgaaatgcgcgatggcg--gtcggc	CRISPR spacer
cgacgttcgacaaaatccgcgatggtattgtca--	Protospacer
***********.**** ********..  ***.

17. spacer 2.23|3482952|33|NZ_CP020025|PILER-CR matches to NC_005871 (Photobacterium profundum SS9 plasmid pPBPR1, complete sequence) position: , mismatch: 7, identity: 0.788

tctaaaagtatacatttgttctta---aagcatttt	CRISPR spacer
tctaaaagtatacacttgtttttattgaagaaa---	Protospacer
**************.*****.***   *** *

18. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.788

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
cggcgttcgacgaactgcgcgatggccgcgtga	Protospacer
**.*********** *********** *.  *

19. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NC_031109 (Gordonia phage Jumbo, complete genome) position: , mismatch: 7, identity: 0.788

cgacgttcgacgaaatgcgcgatggcg--gtcggc	CRISPR spacer
cgacgttcgacaaaatccgcgatggtattgtca--	Protospacer
***********.**** ********..  ***.

20. spacer 3.19|3509872|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 7, identity: 0.781

-ccaggtcccatttgtcgatcggcagcgccatt	CRISPR spacer
agcatgt-gcatttgtccatcggcatcgccatc	Protospacer
  ** **  ******** ******* ******.

21. spacer 2.6|3482708|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP008818 (Ochrobactrum anthropi strain OAB plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

aatattgtcgtggacaaatgccggtgttattg-	CRISPR spacer
aattgtgtcgtggacaaatgcc-gcgtcgccga	Protospacer
***  ***************** *.**....*

22. spacer 2.6|3482708|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_009671 (Ochrobactrum anthropi ATCC 49188 plasmid pOANT03, complete sequence) position: , mismatch: 8, identity: 0.75

aatattgtcgtggacaaatgccggtgttattg-	CRISPR spacer
aattgtgtcgtggacaaatgcc-gcgtcgccga	Protospacer
***  ***************** *.**....*

23. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_031109 (Gordonia phage Jumbo, complete genome) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
cgacgttcgacaaaatccgcgatggtattgtc	Protospacer
***********.**** ********.. *

24. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcaga	Protospacer
 *.****** ************** ** . *.

25. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcaga	Protospacer
 *.****** ************** ** . *.

26. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
aggcggtcgacgaaatgcgcgacggcgtcgtg	Protospacer
 *.** ****************.**** .  *

27. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
ccatattcgccgaattgcgcgatggcggcggc	Protospacer
* *..**** **** *************. *

28. spacer 2.10|3482952|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 8, identity: 0.75

tctaaaagtatacatttgttcttaaagcattt	CRISPR spacer
ggcaagagtatacatttgttattaaaggaact	Protospacer
  .**.************** ****** * .*

29. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_031109 (Gordonia phage Jumbo, complete genome) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
cgacgttcgacaaaatccgcgatggtattgtc	Protospacer
***********.**** ********.. *

30. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcaga	Protospacer
 *.****** ************** ** . *.

31. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcaga	Protospacer
 *.****** ************** ** . *.

32. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
aggcggtcgacgaaatgcgcgacggcgtcgtg	Protospacer
 *.** ****************.**** .  *

33. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.75

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
ccatattcgccgaattgcgcgatggcggcggc	Protospacer
* *..**** **** *************. *

34. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
cagcgatggacgaaatgcgcgatggcgaacgcg	Protospacer
*..** * *******************. **

35. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.758

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
cagcgatggacgaaatgcgcgatggcgaacgcg	Protospacer
*..** * *******************. **

36. spacer 3.4|3508955|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MN855615 (Siphoviridae sp. isolate 320, complete genome) position: , mismatch: 8, identity: 0.75

tatgcgcttgctgctgcgttgatgtacgcggc	CRISPR spacer
tatgcgcttgctggtgctttgatgggcagtgg	Protospacer
************* *** ****** .*.  *

37. spacer 3.4|3508955|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_034248 (Rhizobium phage RHEph10, complete genome) position: , mismatch: 8, identity: 0.75

tatgcgcttgctgctgcgttgatgtacgcggc	CRISPR spacer
tctccttatgctgctgcgttgatggccgcggt	Protospacer
* * * . ****************  *****.

38. spacer 3.9|3509260|33|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcggccgcgatatcgttagcactggctcccg	CRISPR spacer
cggcggccgcgatatcgttcgcgctgccgcgcc	Protospacer
  ***************** **.*** * * *

39. spacer 3.10|3509322|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_013085 (Synechococcus phage S-RSM4, complete genome) position: , mismatch: 8, identity: 0.75

aatttttccagtggtgtcgttgtaattaagga-----	CRISPR spacer
gatttttccaatgctgtcgttgt-----aggagctac	Protospacer
.*********.** *********     ****

40. spacer 3.10|3509322|32|NZ_CP020025|CRISPRCasFinder,CRT matches to FM207411 (Synechococcus phage S-RSM4 complete genome) position: , mismatch: 8, identity: 0.75

aatttttccagtggtgtcgttgtaattaagga-----	CRISPR spacer
gatttttccaatgctgtcgttgt-----aggagctac	Protospacer
.*********.** *********     ****

41. spacer 3.12|3509444|33|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 8, identity: 0.758

gcgcggccgcgatatcgttagcactggctcccg	CRISPR spacer
cggcggccgcgatatcgttcgcgctgccgcgcc	Protospacer
  ***************** **.*** * * *

42. spacer 3.13|3509506|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_013085 (Synechococcus phage S-RSM4, complete genome) position: , mismatch: 8, identity: 0.75

aatttttccagtggtgtcgttgtaattaagga-----	CRISPR spacer
gatttttccaatgctgtcgttgt-----aggagctac	Protospacer
.*********.** *********     ****

43. spacer 3.13|3509506|32|NZ_CP020025|CRISPRCasFinder,CRT matches to FM207411 (Synechococcus phage S-RSM4 complete genome) position: , mismatch: 8, identity: 0.75

aatttttccagtggtgtcgttgtaattaagga-----	CRISPR spacer
gatttttccaatgctgtcgttgt-----aggagctac	Protospacer
.*********.** *********     ****

44. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ggacgaagcaggcgcgcggggcgctggcgggg	Protospacer
.*.. **. ******** ********** ***

45. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP053710 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ggacgaagcaggcgcgcggggcgctggcgggg	Protospacer
.*.. **. ******** ********** ***

46. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP053712 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ggacgaagcaggcgcgcggggcgctggcgggg	Protospacer
.*.. **. ******** ********** ***

47. spacer 1.2|1609047|32|NZ_CP020025|CRISPRCasFinder matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcactggtaacatactccacccgcccaccat	CRISPR spacer
tgtcctggtaacatgttccacccgcccggtgt	Protospacer
* . **********..***********. ..*

48. spacer 1.2|1609047|32|NZ_CP020025|CRISPRCasFinder matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcactggtaacatactccacccgcccaccat	CRISPR spacer
tgtcctggtaacatgttccacccgcccggtgt	Protospacer
* . **********..***********. ..*

49. spacer 1.2|1609047|32|NZ_CP020025|CRISPRCasFinder matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcactggtaacatactccacccgcccaccat	CRISPR spacer
tgtcctggtaacatgttccacccgcccggtgt	Protospacer
* . **********..***********. ..*

50. spacer 2.4|3482586|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 9, identity: 0.719

tatataaacgaggtgaatttatggaaactgta	CRISPR spacer
aatataaacgaggtgagtttatagatatcccc	Protospacer
 ***************.*****.** *.. .

51. spacer 2.4|3482586|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 9, identity: 0.719

tatataaacgaggtgaatttatggaaactgta	CRISPR spacer
tccataaccgaggtgaatgtatggaagaagcg	Protospacer
* .**** ********** *******.  *..

52. spacer 2.4|3482586|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.719

tatataaacgaggtgaatttatggaaactgta	CRISPR spacer
tccataaccgaggtgaatgtatggaagaagcg	Protospacer
* .**** ********** *******.  *..

53. spacer 2.5|3482647|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 9, identity: 0.719

gttagttttctgaaaaaattgttttcttacgc	CRISPR spacer
atcttttttaagaaaaaattgttttcttattt	Protospacer
.*.  ****  ******************. .

54. spacer 2.5|3482647|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP012534 (Psychrobacter sp. P11G5 plasmid pPspP11G5a, complete sequence) position: , mismatch: 9, identity: 0.719

gttagttt---tctgaaaaaattgttttcttacgc	CRISPR spacer
---catctggaactggaaaaactgttttcttacgc	Protospacer
    .*.*    ***.*****.*************

55. spacer 2.7|3482769|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MT446414 (UNVERIFIED: Escherichia virus TH43, complete genome) position: , mismatch: 9, identity: 0.719

ttcgagacacttctctgcaaaattaatgaaat	CRISPR spacer
ataaatttccttctctgcaaagttgatgaaat	Protospacer
 * .*  . ************.**.*******

56. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
ctctcagcgacgaactgcgcgatgccggtcga	Protospacer
*  .   ******* ********* ******.

57. spacer 2.9|3482891|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
atgtgctcgaggaaatgcgcgatgccggtctc	Protospacer
  ..*.**** ************* *****

58. spacer 2.11|3483013|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MT446414 (UNVERIFIED: Escherichia virus TH43, complete genome) position: , mismatch: 9, identity: 0.719

ttcgagacacttctctgcaaaattaatgaaat	CRISPR spacer
ataaatttccttctctgcaaagttgatgaaat	Protospacer
 * .*  . ************.**.*******

59. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
ctctcagcgacgaactgcgcgatgccggtcga	Protospacer
*  .   ******* ********* ******.

60. spacer 2.13|3483135|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttcgacgaaatgcgcgatggcggtcgg	CRISPR spacer
atgtgctcgaggaaatgcgcgatgccggtctc	Protospacer
  ..*.**** ************* *****

61. spacer 2.18|3482647|33|NZ_CP020025|PILER-CR matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 9, identity: 0.727

gttagttttctgaaaaaattgttttcttacgct	CRISPR spacer
atcttttttaagaaaaaattgttttcttatttt	Protospacer
.*.  ****  ******************. .*

62. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
aggcggtcgacgaaatgcgcgacggcgtcgtgt	Protospacer
 *.** ****************.**** .  *.

63. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcagag	Protospacer
 *.****** ************** ** . *.

64. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
ctctcagcgacgaactgcgcgatgccggtcgac	Protospacer
*  .   ******* ********* ******.*

65. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcagag	Protospacer
 *.****** ************** ** . *.

66. spacer 2.23|3482952|33|NZ_CP020025|PILER-CR matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 9, identity: 0.727

tctaaaagtatacatttgttcttaaagcatttt	CRISPR spacer
ggcaagagtatacatttgttattaaaggaactg	Protospacer
  .**.************** ****** * .*

67. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
aggcggtcgacgaaatgcgcgacggcgtcgtgt	Protospacer
 *.** ****************.**** .  *.

68. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcagag	Protospacer
 *.****** ************** ** . *.

69. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
ctctcagcgacgaactgcgcgatgccggtcgac	Protospacer
*  .   ******* ********* ******.*

70. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 9, identity: 0.727

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
aggcgttcgccgaaatgcgcgatgccgtcagag	Protospacer
 *.****** ************** ** . *.

71. spacer 3.2|3508833|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 9, identity: 0.719

aatatccgttcctcgctctgcgttttcgttga	CRISPR spacer
gaaatccgtttctcgctctccgttttgctctt	Protospacer
.* *******.******** ******  *.

72. spacer 3.2|3508833|32|NZ_CP020025|CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 9, identity: 0.719

aatatccgttcctcgctctgcgttttcgttga	CRISPR spacer
gaaatccgtttctcgctctccgttttgctctt	Protospacer
.* *******.******** ******  *.

73. spacer 3.6|3509077|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP016721 (Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11B, complete sequence) position: , mismatch: 9, identity: 0.719

gattcaatgtccgacgcatccaagtaaatatt	CRISPR spacer
ctttcaatgtcctacgcattcaagtcatgaaa	Protospacer
  ********** ******.***** *  *

74. spacer 3.6|3509077|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP016727 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08B, complete sequence) position: , mismatch: 9, identity: 0.719

gattcaatgtccgacgcatccaagtaaatatt	CRISPR spacer
ctttcaatgtcctacgcattcaagtcatgaaa	Protospacer
  ********** ******.***** *  *

75. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to JX469828 (Uncultured bacterium plasmid pRSB223, complete sequence) position: , mismatch: 9, identity: 0.719

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ccgctaaagaggcgcgcaaggcgctggaggcc	Protospacer
  *.************* .********  *

76. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to JX469829 (Uncultured bacterium plasmid pB1, complete sequence) position: , mismatch: 9, identity: 0.719

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ccgctaaagaggcgcgcaaggcgctggaggcc	Protospacer
  *.************* .********  *

77. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.719

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
tgatggctgaggcgcgccgggcgctgcccggc	Protospacer
 *.* .  ****************** *.**

78. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_008766 (Acidovorax sp. JS42 plasmid pAOVO02, complete sequence) position: , mismatch: 9, identity: 0.719

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ccgctaaagaggcgcgcaaggcgctggaggcc	Protospacer
  *.************* .********  *

79. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.719

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
catgtgaagcggcgcgccgggcgcgggctccg	Protospacer
 .  *.*** ************** ****  *

80. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_MN366361 (Bacterium plasmid pALTS33, complete sequence) position: , mismatch: 9, identity: 0.719

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ccgctaaagaggcgcgcaaggcgctggaggcc	Protospacer
  *.************* .********  *

81. spacer 3.24|3508955|33|NZ_CP020025|PILER-CR matches to MN855615 (Siphoviridae sp. isolate 320, complete genome) position: , mismatch: 9, identity: 0.727

tatgcgcttgctgctgcgttgatgtacgcggcc	CRISPR spacer
tatgcgcttgctggtgctttgatgggcagtggt	Protospacer
************* *** ****** .*.  * .

82. spacer 3.29|3509260|34|NZ_CP020025|PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.735

gcgcggccgcgatatcgttagcactggctcccgc	CRISPR spacer
cggcggccgcgatatcgttcgcgctgccgcgccg	Protospacer
  ***************** **.*** * * *

83. spacer 3.32|3509444|34|NZ_CP020025|PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.735

gcgcggccgcgatatcgttagcactggctcccgc	CRISPR spacer
cggcggccgcgatatcgttcgcgctgccgcgccg	Protospacer
  ***************** **.*** * * *

84. spacer 2.5|3482647|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NZ_KX711616 (Bacillus subtilis strain 72 plasmid pBS72, complete sequence) position: , mismatch: 10, identity: 0.688

gttagttttctgaaaaaattgttttcttacgc	CRISPR spacer
aaagcttttcttaaaagattgttttctttgtc	Protospacer
.  . ****** ****.***********   *

85. spacer 2.17|3482586|33|NZ_CP020025|PILER-CR matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 10, identity: 0.697

tatataaacgaggtgaatttatggaaactgtac	CRISPR spacer
aatataaacgaggtgagtttatagatatcccct	Protospacer
 ***************.*****.** *.. . .

86. spacer 2.22|3482891|33|NZ_CP020025|PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 10, identity: 0.697

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
atgtgctcgaggaaatgcgcgatgccggtctcg	Protospacer
  ..*.**** ************* *****

87. spacer 2.26|3483135|33|NZ_CP020025|PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 10, identity: 0.697

cgacgttcgacgaaatgcgcgatggcggtcggc	CRISPR spacer
atgtgctcgaggaaatgcgcgatgccggtctcg	Protospacer
  ..*.**** ************* *****

88. spacer 3.14|3509567|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_004929 (Ruegeria sp. PR1b plasmid pSD20, complete sequence) position: , mismatch: 10, identity: 0.688

aggttaaagaggcgcgccgggcgctggctggg	CRISPR spacer
ccctctggcaggcgcgccgggcgcaggcgggg	Protospacer
   *. .. *************** *** ***

89. spacer 2.5|3482647|32|NZ_CP020025|CRISPRCasFinder,CRT matches to NC_023026 (Francisella novicida strain PA10-7858 plasmid pFNPA10, complete sequence) position: , mismatch: 11, identity: 0.656

gttagttttctgaaaaaattgttttcttacgc	CRISPR spacer
aacgccactctgaaaaagttgttttctttcgt	Protospacer
. .. . .*********.********** **.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

262961 : 351576

Burkholderia_phage(21.43%)

plate,tail,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000187016.1\|262961_264062_-\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_016235454.1\|264430_266275_+	TonB-dependent vitamin B12 receptor BtuB	A0A0P0I887	Acinetobacter_phage	5.5e-10	32.6
WP_000201825.1\|266219_267077_+	glutamate racemase	NA	NA	NA	NA
WP_000236980.1\|272233_272677_-	acetyltransferase	NA	NA	NA	NA
WP_001122786.1\|272833_273763_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_022646399.1\|274031_275633_+	malate synthase A	NA	NA	NA	NA
WP_000857856.1\|275662_276967_+	isocitrate lyase	NA	NA	NA	NA
WP_022646400.1\|277052_278777_+	bifunctional isocitrate dehydrogenase kinase/phosphatase	NA	NA	NA	NA
WP_000226403.1\|278793_279618_-	glyoxylate bypass operon transcriptional repressor IclR	NA	NA	NA	NA
WP_001572176.1\|279817_283501_+	methionine synthase	A0A140XBC7	Dickeya_phage	1.3e-26	90.2
WP_000956822.1\|283720_285352_+	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_022646401.1\|285441_286131_-	dipeptidase PepE	NA	NA	NA	NA
WP_000610344.1\|286253_287066_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
WP_000858564.1\|287058_288288_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_000437897.1\|288339_289164_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_000406332.1\|289174_289972_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_001027853.1\|290037_290532_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_000245629.1\|290531_290939_-	PTS sorbose transporter subunit IIA	NA	NA	NA	NA
WP_001195407.1\|290948_291755_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000431660.1\|291824_292772_-	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_022646403.1\|293119_293992_+	23S rRNA pseudouridine(2604) synthase RluF	NA	NA	NA	NA
WP_001207638.1\|293992_294265_-	DUF3811 domain-containing protein	NA	NA	NA	NA
WP_022646404.1\|294793_295921_+	slipin family protein	NA	NA	NA	NA
WP_022646405.1\|295926_296718_+	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	2.0e-46	45.1
WP_022646406.1\|296731_297187_-	hypothetical protein	F6MIM0	Haemophilus_phage	6.6e-26	42.7
WP_022646407.1\|297183_297891_-	DUF4376 domain-containing protein	A0A0E3JQ06	Enterobacteria_phage	5.3e-14	42.4
WP_105178362.1\|297887_299501_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.9e-59	33.3
WP_022646409.1\|299503_300220_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	3.1e-22	37.2
WP_022646410.1\|300212_301328_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	2.0e-100	51.7
WP_022646411.1\|301318_301678_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	1.1e-34	64.2
WP_000679403.1\|301776_302478_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	6.4e-12	36.3
WP_022646412.1\|302487_303528_-	phage late control D family protein	A4JWL3	Burkholderia_virus	2.0e-73	45.1
WP_001269711.1\|303515_303725_-\|tail	tail protein X	A4JWL2	Burkholderia_virus	1.3e-16	60.3
WP_022646413.1\|303724_304678_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	3.3e-35	50.8
WP_022646414.1\|304677_307053_-	hypothetical protein	A4JWL0	Burkholderia_virus	1.0e-56	26.0
WP_015674804.1\|307154_307283_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_022646415.1\|307242_307560_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907502.1\|307610_308135_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	9.5e-69	69.0
WP_022646416.1\|308134_309559_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	7.0e-191	70.2
WP_000875310.1\|309548_309746_-	hypothetical protein	NA	NA	NA	NA
WP_022646417.1\|309742_310198_-	hypothetical protein	NA	NA	NA	NA
WP_000777272.1\|310342_310657_-	membrane protein	Q5ZQY8	Pseudomonas_phage	9.2e-19	43.2
WP_000266448.1\|310669_311275_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	3.3e-57	57.1
WP_022646418.1\|311277_311565_-	hypothetical protein	Q6QIC8	Burkholderia_phage	3.9e-16	48.6
WP_000619864.1\|312102_312450_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	2.2e-21	49.0
WP_022646419.1\|312504_313854_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000608644.1\|314126_315389_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_022646420.1\|316330_317980_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000757333.1\|318334_318577_+	polysaccharide production threonine-rich protein	NA	NA	NA	NA
WP_001296632.1\|318690_319329_+	YjbF family lipoprotein	NA	NA	NA	NA
WP_022646421.1\|319325_320063_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_077516252.1\|320062_322159_+	YjbH domain-containing protein	NA	NA	NA	NA
WP_001295279.1\|322205_322484_-	periplasmic protein	NA	NA	NA	NA
WP_047625266.1\|322697_323108_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_001252058.1\|323201_324092_-	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_001361466.1\|324106_325651_-	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_000695387.1\|325804_326995_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000179165.1\|327359_328475_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	4.3e-18	31.7
WP_105178363.1\|328546_329875_+	maltoporin LamB	NA	NA	NA	NA
WP_000783444.1\|330038_330959_+	maltose operon protein MalM	NA	NA	NA	NA
WP_022646424.1\|331186_332767_+	SopA family protein	NA	NA	NA	NA
WP_001308201.1\|332989_333487_+	chorismate lyase	NA	NA	NA	NA
WP_000455227.1\|333499_334372_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000017354.1\|334526_336950_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000002907.1\|337120_337489_+	diacylglycerol kinase	NA	NA	NA	NA
WP_000646078.1\|337598_338207_+	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_001361471.1\|338279_339605_+	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_001296638.1\|339720_339930_+	CsbD family protein	NA	NA	NA	NA
WP_000416263.1\|339971_340487_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_022646425.1\|340804_341809_+	DUF2713 family protein	NA	NA	NA	NA
WP_021520058.1\|343611_344355_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.0e-145	95.5
WP_050496112.1\|344291_344894_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.4e-86	83.7
WP_024186507.1\|348019_349183_+	hypothetical protein	A0A0E3M0V5	Enterobacteria_phage	1.3e-73	42.7
WP_000654156.1\|349179_349461_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	4.1e-18	50.0
WP_059332724.1\|349470_350175_+	hypothetical protein	A0A1X7QGH6	Escherichia_phage	1.2e-58	61.7
WP_105178364.1\|350185_350494_+	hypothetical protein	NA	NA	NA	NA
WP_001298868.1\|350538_351576_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

DBSCAN-SWA_2

437822 : 496058

Burkholderia_phage(17.65%)

transposase,tail,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000003800.1\|437822_439340_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-87	38.0
WP_022646457.1\|439576_441034_-	dipeptide/tripeptide permease DtpC	A0A0P0IY73	Acinetobacter_phage	4.0e-48	29.6
WP_001296667.1\|441092_443240_-	lysine decarboxylase CadA	NA	NA	NA	NA
WP_000092909.1\|443319_444654_-	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_015674804.1\|446504_446633_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_022646415.1\|446592_446910_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907502.1\|446960_447485_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	9.5e-69	69.0
WP_022646416.1\|447484_448909_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	7.0e-191	70.2
WP_000875310.1\|448898_449096_-	hypothetical protein	NA	NA	NA	NA
WP_022646417.1\|449092_449548_-	hypothetical protein	NA	NA	NA	NA
WP_000777272.1\|449692_450007_-	membrane protein	Q5ZQY8	Pseudomonas_phage	9.2e-19	43.2
WP_105178368.1\|450019_450559_-	lytic transglycosylase domain-containing protein	J9SHG5	Pseudomonas_phage	2.3e-54	56.2
WP_105178369.1\|450563_450851_-	hypothetical protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_000619864.1\|451339_451687_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	2.2e-21	49.0
WP_000608644.1\|453311_454574_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_001188520.1\|456470_457046_-	transcriptional regulator	NA	NA	NA	NA
WP_000068927.1\|457082_458780_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_000883400.1\|458755_459094_-	divalent cation tolerance protein CutA	NA	NA	NA	NA
WP_000961959.1\|459209_460511_-	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA
WP_000069437.1\|460628_462065_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_001267445.1\|462401_462878_+	membrane protein FxsA	NA	NA	NA	NA
WP_000015841.1\|462893_464150_-	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
WP_001026276.1\|464425_464719_+	co-chaperone GroES	K4F9I2	Cronobacter_phage	9.2e-13	45.4
WP_000729117.1\|464762_466409_+	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	5.3e-190	68.9
WP_000558209.1\|466543_466897_+	DUF4156 domain-containing protein	NA	NA	NA	NA
WP_022646461.1\|466946_467816_-	YjeJ family protein	NA	NA	NA	NA
WP_077516266.1\|468050_469079_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
WP_000257278.1\|469120_469687_+	elongation factor P	NA	NA	NA	NA
WP_000977754.1\|469738_469864_+	lipoprotein antitoxin entericidin A	NA	NA	NA	NA
WP_000239596.1\|469974_470121_+	lipoprotein toxin entericidin B	NA	NA	NA	NA
WP_000118482.1\|470296_470614_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_105178371.1\|470610_471144_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	2.2e-44	53.1
WP_105178372.1\|471237_472371_-	CMY-2 family class C beta-lactamase	NA	NA	NA	NA
WP_000609663.1\|472433_472793_-	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_000208757.1\|472803_473199_-	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_000829498.1\|473209_473944_-	fumarate reductase iron-sulfur protein	NA	NA	NA	NA
WP_022646463.1\|473936_475745_-	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
WP_000004771.1\|476069_477047_+	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	6.8e-28	28.2
WP_023908951.1\|477265_478768_+	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_001236797.1\|478918_482242_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_000934920.1\|482263_483232_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_000041980.1\|483328_484381_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_001295188.1\|484475_485021_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.2e-28	40.4
WP_010723271.1\|485652_485706_+	hypothetical protein	NA	NA	NA	NA
WP_022646465.1\|485688_486828_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_023908950.1\|486826_488374_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_000981977.1\|488345_488807_+\|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	NA	NA	NA	NA
WP_000990261.1\|488825_490163_+	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	8.8e-18	31.0
WP_077516270.1\|490172_492020_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.4e-60	41.3
WP_001280339.1\|492012_492963_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_001051883.1\|493048_493357_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_000460357.1\|493432_494713_+	GTPase HflX	NA	NA	NA	NA
WP_000312479.1\|494798_496058_+\|protease	FtsH protease activity modulator HflK	A0A1L2CVV0	Pectobacterium_phage	3.6e-05	25.5

DBSCAN-SWA_3

700569 : 709878

Cyanophage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000130187.1\|700569_701523_+	transaldolase	A0A127KNC6	Cyanophage	1.7e-10	31.5
WP_001094685.1\|701637_702225_+	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_000528541.1\|702259_702826_-	acetate uptake transporter	NA	NA	NA	NA
WP_001102376.1\|702974_703688_-	acidic protein MsyB	NA	NA	NA	NA
WP_000843577.1\|703713_704118_-	DUF2541 family protein	NA	NA	NA	NA
WP_000516135.1\|704493_706410_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	6.9e-149	51.1
WP_001118464.1\|706498_707629_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	4.6e-28	34.6
WP_000729631.1\|707732_707828_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.6e-06	80.6
WP_001181672.1\|707972_708182_-	type I toxin-antitoxin system toxin MokC	A0A0P0ZAX5	Stx2-converting_phage	5.2e-18	72.5
WP_000681360.1\|708711_709878_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	7.5e-90	50.3

DBSCAN-SWA_4

2014621 : 2024764

Escherichia_phage(43.75%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053289980.1\|2014621_2014777_-	DUF1391 family protein	M4QQ57	Salicola_phage	1.0e-07	55.3
WP_000948459.1\|2015096_2015573_-	DNA-binding transcriptional repressor RacR	A0A2D1GNH0	Pseudomonas_phage	2.2e-11	53.4
WP_000712069.1\|2015696_2015993_+	toxin YdaS	A0A0R6PH31	Moraxella_phage	9.6e-10	44.9
WP_105178393.1\|2016015_2016276_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	7.4e-30	96.8
WP_001151150.1\|2016291_2016714_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.6e-64	90.6
WP_000403785.1\|2016771_2017128_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.8e-58	99.2
WP_001224662.1\|2017221_2017404_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
WP_000753060.1\|2017396_2017573_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	6.7e-27	94.8
WP_000813254.1\|2019562_2019718_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_023141427.1\|2019885_2020158_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.2e-12	50.8
WP_053289977.1\|2020159_2021209_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	1.4e-106	53.4
WP_053289978.1\|2021221_2021596_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.7e-35	64.5
WP_105178463.1\|2021694_2021883_+\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	1.2e-18	80.0
WP_105178394.1\|2021887_2022232_+	YdfR family protein	K7PGU6	Enterobacteria_phage	1.4e-36	94.0
WP_000992105.1\|2022258_2022792_+	lysozyme	K7PLY1	Enterobacteria_phage	4.8e-100	96.0
WP_105178395.1\|2023978_2024764_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	9.5e-81	86.9

DBSCAN-SWA_5

2840022 : 2849464

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077516314.1\|2840022_2841159_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.7e-163	98.0
WP_077516316.1\|2841155_2843156_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.1
WP_001296231.1\|2843280_2843742_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001295430.1\|2843782_2844253_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_000598641.1\|2844299_2845019_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001334139.1\|2845015_2846701_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	9.5e-304	99.5
WP_077516318.1\|2846922_2847654_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.8e-111	99.0
WP_001216963.1\|2847713_2847821_+	protein YohO	NA	NA	NA	NA
WP_024242011.1\|2847801_2848533_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_077516320.1\|2848537_2849464_-	glycine betaine ABC transporter ATP binding protein YehX	F2Y1V5	Organic_Lake_phycodnavirus	5.7e-08	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020025

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection