Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020013 Haemophilus influenzae strain 6P32H1 chromosome, complete genome 1 crisprs DEDDh,DinG,cas3,WYL 1 0 7 0

Results visualization

1. NZ_CP020013
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020013_1 245971-246084 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020013_1 1.1|245998|60|NZ_CP020013|CRISPRCasFinder 245998-246057 60 NZ_CP020013.1 245266-245325 0 1.0
NZ_CP020013_1 1.1|245998|60|NZ_CP020013|CRISPRCasFinder 245998-246057 60 NZ_CP020013.1 245632-245691 0 1.0
NZ_CP020013_1 1.1|245998|60|NZ_CP020013|CRISPRCasFinder 245998-246057 60 NZ_CP020013.1 244900-244959 1 0.983

1. spacer 1.1|245998|60|NZ_CP020013|CRISPRCasFinder matches to position: 245266-245325, mismatch: 0, identity: 1.0

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	Protospacer
************************************************************

2. spacer 1.1|245998|60|NZ_CP020013|CRISPRCasFinder matches to position: 245632-245691, mismatch: 0, identity: 1.0

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	Protospacer
************************************************************

3. spacer 1.1|245998|60|NZ_CP020013|CRISPRCasFinder matches to position: 244900-244959, mismatch: 1, identity: 0.983

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgtttgag	Protospacer
******************************************************.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 80573 : 92669 11 Vibrio_phage(14.29%) tRNA NA
DBSCAN-SWA_2 459484 : 525457 78 Haemophilus_phage(12.5%) holin,terminase,portal,tRNA,protease,tail NA
DBSCAN-SWA_3 529355 : 537407 13 Mannheimia_phage(28.57%) integrase attL 528915:528929|attR 540117:540131
DBSCAN-SWA_4 1341616 : 1350134 9 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_5 1538564 : 1545243 10 Sodalis_phage(16.67%) NA NA
DBSCAN-SWA_6 1605392 : 1611586 13 Mannheimia_phage(57.14%) NA NA
DBSCAN-SWA_7 1620064 : 1632067 11 Acinetobacter_phage(42.86%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage