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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP020006 Haemophilus influenzae strain 48P106H1 chromosome, complete genome 1 crisprs DEDDh,DinG,cas3,WYL 1 0 5 0

Results visualization

1. NZ_CP020006
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP020006_1 245970-246083 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP020006_1 1.1|245997|60|NZ_CP020006|CRISPRCasFinder 245997-246056 60 NZ_CP020006.1 245265-245324 0 1.0
NZ_CP020006_1 1.1|245997|60|NZ_CP020006|CRISPRCasFinder 245997-246056 60 NZ_CP020006.1 245631-245690 0 1.0
NZ_CP020006_1 1.1|245997|60|NZ_CP020006|CRISPRCasFinder 245997-246056 60 NZ_CP020006.1 244899-244958 1 0.983

1. spacer 1.1|245997|60|NZ_CP020006|CRISPRCasFinder matches to position: 245265-245324, mismatch: 0, identity: 1.0

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	Protospacer
************************************************************

2. spacer 1.1|245997|60|NZ_CP020006|CRISPRCasFinder matches to position: 245631-245690, mismatch: 0, identity: 1.0

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	Protospacer
************************************************************

3. spacer 1.1|245997|60|NZ_CP020006|CRISPRCasFinder matches to position: 244899-244958, mismatch: 1, identity: 0.983

tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgcttgag	CRISPR spacer
tttgacgtgcaactctttctctttccgcctcagcttgttgacggcgagcttctgtttgag	Protospacer
******************************************************.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 80573 : 92669 11 Vibrio_phage(14.29%) tRNA NA
DBSCAN-SWA_2 1297397 : 1305915 8 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_3 1493942 : 1500621 10 Sodalis_phage(16.67%) NA NA
DBSCAN-SWA_4 1560758 : 1566952 13 Mannheimia_phage(57.14%) NA NA
DBSCAN-SWA_5 1575338 : 1587337 11 Acinetobacter_phage(42.86%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage