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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017927 Bordetella pertussis strain J295 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. NZ_CP017927
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017927_1 250555-250639 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017927_2 431998-432091 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017927_3 995268-995362 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017927_4 1818722-1818849 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017927_5 3430343-3430452 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164893 : 225368 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 233300 : 286888 47 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 390821 : 448330 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589335 : 650527 56 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 655851 : 702042 50 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tRNA,tail NA
DBSCAN-SWA_8 708208 : 762138 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 884727 : 952703 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 996232 : 1068749 60 Enterococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_11 1072502 : 1134578 53 Catovirus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_12 1152148 : 1218667 54 Erysipelothrix_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1291630 : 1328396 36 Salmonella_phage(50.0%) transposase NA
DBSCAN-SWA_14 1417038 : 1469191 45 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_15 1513116 : 1581202 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_16 1617151 : 1672742 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1830508 : 1889778 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_18 1900018 : 1944341 45 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1974114 : 2038483 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2131638 : 2183374 44 Lake_Baikal_phage(18.18%) transposase,tRNA,protease NA
DBSCAN-SWA_21 2477019 : 2535263 54 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_22 2577541 : 2644040 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2807645 : 2870089 55 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2884565 : 2925924 31 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_25 2956310 : 3010541 50 Planktothrix_phage(16.67%) transposase NA
DBSCAN-SWA_26 3379945 : 3433686 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3439841 : 3499139 47 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3514077 : 3572150 47 Planktothrix_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_29 4004360 : 4069272 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage