CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015567	Pasteurella multocida strain USDA-ARS-USMARC-60675 chromosome, complete genome	2 crisprs	cas3,cas5f,cas8f,cas7f,cas6f,cas1,cas3-cas2,DEDDh,DinG,csa3	7	43	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015567_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015567_1

887890-888817

TypeI-F

Consensus_repeat	Method
GTTCACCATCGTGTAGATGGCTTAGAAA	PILER-CR
GTTCACCATCGTGTAGATGGCTTAGAAA	CRISPRCasFinder
GTTCACCATCGTGTAGATGGCTTAGAAA	CRT

15 spacers

cas6f,cas7f,cas5f,cas8f,cas1,cas3-cas2

The CRISPR arrays of NZ_CP015567_1

>merge|NZ_CP015567|1|887890-888817|PILER-CR,CRISPRCasFinder,CRT
GTTCACCATCGTGTAGATGGCTTAGAAATTCCGATTTTTGATAGTCAAAGACTACTGAGTGTTCACCATCGTGTAGATGGCTTAGAAAAAACGGTCGTGCGTCGTTCGGGTTGTGATCTTGTTCACCATCGTGTAGATGGCTTAGAAAGAAACACTAGAAGATTTAACGGTCATTGAAAAGTTCACCATCGTGTAGATGGCTTAGAAAATTCGATTTCCAGTGCCGAAAATCCATGCCCTGTTCACCATCGTGTAGATGGCTTAGAAAATAATGACGTGTTCAACTAACGGCTGACAATCGTTCACCATCGTGTAGATGGCTTAGAAACACAACATGTGCTGAAAGTGCGTGAGATTTGAGTTCACCATCGTGTAGATGGCTTAGAAATACCCGATGTTAGAGGCAATCAAAGTGGAGCTGTTCACCATCGTGTAGATGGCTTAGAAAAAAGTCTCATTTAACACCGCGCGACGCTGGAAGTTCACCATCGTGTAGATGGCTTAGAAAAAGCCCACCTTGCGCTTGAACAGATGAATTAAGTTCACCATCGTGTAGATGGCTTAGAAATTTAAGCTACGTTTATCCGCAAGATTCACTACGTTCACCATCGTGTAGATGGCTTAGAAAGTTGGTGCGAATTTCACATCTAAGCTTGAAATGTTCACCATCGTGTAGATGGCTTAGAAAGTTGGTGCGAATTTCACATCTAAGCTTGAAATGTTCACCATCGTGTAGATGGCTTAGAAAGTTGGTGCGAATTTCACATCTAAGCTTGAAATGTTCACCATTGTGTAGATGGCTTAGAAAGTTGGTGCGAATTTCACATCTAAGCTTGAAATGTTCACCATCGTGTAGATGGCTTAGAAAAGTTAAAGCTAAGAAACTAACGGATATTGCGAGTTCACCATCGTGTAGATGGCTTAAAAA

>NZ_CP015567|1|1|887890-888637|PILER-CR
GTTCACCATCGTGTAGATGGCTTAGAAA	TTCCGATTTTTGATAGTCAAAGACTACTGAGT
GTTCACCATCGTGTAGATGGCTTAGAAA	AAACGGTCGTGCGTCGTTCGGGTTGTGATCTT
GTTCACCATCGTGTAGATGGCTTAGAAA	GAAACACTAGAAGATTTAACGGTCATTGAAAA
GTTCACCATCGTGTAGATGGCTTAGAAA	ATTCGATTTCCAGTGCCGAAAATCCATGCCCT
GTTCACCATCGTGTAGATGGCTTAGAAA	ATAATGACGTGTTCAACTAACGGCTGACAATC
GTTCACCATCGTGTAGATGGCTTAGAAA	CACAACATGTGCTGAAAGTGCGTGAGATTTGA
GTTCACCATCGTGTAGATGGCTTAGAAA	TACCCGATGTTAGAGGCAATCAAAGTGGAGCT
GTTCACCATCGTGTAGATGGCTTAGAAA	AAAGTCTCATTTAACACCGCGCGACGCTGGAA
GTTCACCATCGTGTAGATGGCTTAGAAA	AAGCCCACCTTGCGCTTGAACAGATGAATTAA
GTTCACCATCGTGTAGATGGCTTAGAAA	TTTAAGCTACGTTTATCCGCAAGATTCACTAC
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA

>NZ_CP015567|1|1|887890-888817|CRISPRCasFinder
GTTCACCATCGTGTAGATGGCTTAGAAA	TTCCGATTTTTGATAGTCAAAGACTACTGAGT
GTTCACCATCGTGTAGATGGCTTAGAAA	AAACGGTCGTGCGTCGTTCGGGTTGTGATCTT
GTTCACCATCGTGTAGATGGCTTAGAAA	GAAACACTAGAAGATTTAACGGTCATTGAAAA
GTTCACCATCGTGTAGATGGCTTAGAAA	ATTCGATTTCCAGTGCCGAAAATCCATGCCCT
GTTCACCATCGTGTAGATGGCTTAGAAA	ATAATGACGTGTTCAACTAACGGCTGACAATC
GTTCACCATCGTGTAGATGGCTTAGAAA	CACAACATGTGCTGAAAGTGCGTGAGATTTGA
GTTCACCATCGTGTAGATGGCTTAGAAA	TACCCGATGTTAGAGGCAATCAAAGTGGAGCT
GTTCACCATCGTGTAGATGGCTTAGAAA	AAAGTCTCATTTAACACCGCGCGACGCTGGAA
GTTCACCATCGTGTAGATGGCTTAGAAA	AAGCCCACCTTGCGCTTGAACAGATGAATTAA
GTTCACCATCGTGTAGATGGCTTAGAAA	TTTAAGCTACGTTTATCCGCAAGATTCACTAC
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATTGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	AGTTAAAGCTAAGAAACTAACGGATATTGCGA
GTTCACCATCGTGTAGATGGCTTAAAAA

>NZ_CP015567|1|1|887890-888817|CRT
GTTCACCATCGTGTAGATGGCTTAGAAA	TTCCGATTTTTGATAGTCAAAGACTACTGAGT
GTTCACCATCGTGTAGATGGCTTAGAAA	AAACGGTCGTGCGTCGTTCGGGTTGTGATCTT
GTTCACCATCGTGTAGATGGCTTAGAAA	GAAACACTAGAAGATTTAACGGTCATTGAAAA
GTTCACCATCGTGTAGATGGCTTAGAAA	ATTCGATTTCCAGTGCCGAAAATCCATGCCCT
GTTCACCATCGTGTAGATGGCTTAGAAA	ATAATGACGTGTTCAACTAACGGCTGACAATC
GTTCACCATCGTGTAGATGGCTTAGAAA	CACAACATGTGCTGAAAGTGCGTGAGATTTGA
GTTCACCATCGTGTAGATGGCTTAGAAA	TACCCGATGTTAGAGGCAATCAAAGTGGAGCT
GTTCACCATCGTGTAGATGGCTTAGAAA	AAAGTCTCATTTAACACCGCGCGACGCTGGAA
GTTCACCATCGTGTAGATGGCTTAGAAA	AAGCCCACCTTGCGCTTGAACAGATGAATTAA
GTTCACCATCGTGTAGATGGCTTAGAAA	TTTAAGCTACGTTTATCCGCAAGATTCACTAC
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATTGTGTAGATGGCTTAGAAA	GTTGGTGCGAATTTCACATCTAAGCTTGAAAT
GTTCACCATCGTGTAGATGGCTTAGAAA	AGTTAAAGCTAAGAAACTAACGGATATTGCGA
GTTCACCATCGTGTAGATGGCTTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015567.1\|WP_005753659.1\|888986_889967_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NZ_CP015567.1\|WP_005721379.1\|900202_900526_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
NZ_CP015567.1\|WP_014325846.1\|886178_887186_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP015567.1\|WP_016504385.1\|883848_885183_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|274203
NZ_CP015567.1\|WP_014325843.1\|881458_883618_+\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	unknown	unknown	gnl\|CDD\|236981
NZ_CP015567.1\|WP_005721273.1\|877574_877844_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP015567.1\|WP_016504384.1\|885192_886176_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|274204
NZ_CP015567.1\|WP_005721326.1\|897788_898253_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
NZ_CP015567.1\|WP_005721328.1\|898300_899515_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
NZ_CP015567.1\|WP_014325842.1\|879276_881325_+\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234655
NZ_CP015567.1\|WP_005753664.1\|893325_895182_+\|response-regulator	unknown	unknown	gnl\|CDD\|236842
NZ_CP015567.1\|WP_005721377.1\|899746_900133_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
NZ_CP015567.1\|WP_014325848.1\|889947_893268_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|187804
NZ_CP015567.1\|WP_014325850.1\|896993_897710_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	unknown	unknown	gnl\|CDD\|223639
NZ_CP015567.1\|WP_014325847.1\|887188_887749_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|274202
NZ_CP015567.1\|WP_014325841.1\|877982_879095_-\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|183270
NZ_CP015567.1\|WP_014325849.1\|895976_896780_-\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NZ_CP015567.1\|WP_005751227.1\|873947_874463_+\|heme-utilization-protein-HutZ	unknown	unknown	gnl\|CDD\|200361
NZ_CP015567.1\|WP_005725867.1\|895322_895913_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015567.1\|WP_014325840.1\|874504_877408_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273808

Protein	Function_ID	Function_description	E-value
NZ_CP015567.1\|WP_005753659.1\|888986_889967_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	0
NZ_CP015567.1\|WP_014325846.1\|886178_887186_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP015567.1\|WP_016504385.1\|883848_885183_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|274203	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	5.29485e-151
NZ_CP015567.1\|WP_014325843.1\|881458_883618_+\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	0
NZ_CP015567.1\|WP_005721273.1\|877574_877844_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	3.85836e-50
NZ_CP015567.1\|WP_016504384.1\|885192_886176_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|274204	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	5.3086e-151
NZ_CP015567.1\|WP_005721326.1\|897788_898253_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	5.78928e-83
NZ_CP015567.1\|WP_005721328.1\|898300_899515_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP015567.1\|WP_014325842.1\|879276_881325_+\|methionine--tRNA-ligase	gnl\|CDD\|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP015567.1\|WP_005753664.1\|893325_895182_+\|response-regulator	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	0
NZ_CP015567.1\|WP_005721377.1\|899746_900133_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	1.51567e-94
NZ_CP015567.1\|WP_014325848.1\|889947_893268_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_CP015567.1\|WP_014325850.1\|896993_897710_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	gnl\|CDD\|223639	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis].	3.89077e-117
NZ_CP015567.1\|WP_014325847.1\|887188_887749_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|274202	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.09974e-90
NZ_CP015567.1\|WP_014325841.1\|877982_879095_-\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|183270	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC.	0
NZ_CP015567.1\|WP_014325849.1\|895976_896780_-\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	9.50997e-153
NZ_CP015567.1\|WP_005751227.1\|873947_874463_+\|heme-utilization-protein-HutZ	gnl\|CDD\|200361	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ. Members of this family are heme utilization proteins, typically designated HutZ. They are members of the PPOX family (pfam01243) and, except for the lack of an N-terminal extension, are closely related to one form of heme oxidase (1.14.99.3), HugZ (TIGR04109). Members typically are found in a three-gene operon with radical SAM enzyme HutW and a protein of unknown function, HutX.	2.01653e-97
NZ_CP015567.1\|WP_005721379.1\|900202_900526_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	6.36459e-65
NZ_CP015567.1\|WP_014325840.1\|874504_877408_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.24483e-109

>NZ_CP015567.1|WP_014325847.1|887188_887749_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MTTHYIELKAIPQMDMLQSEVIGHCMQILHQFLPHFEGRVGVAFPAYGLGRTLGGIVRLFANQEDCNQLHQQLLRSGLSDYALISEVSKTPLSTECRSYSRVHRKGQSAIRRTEKRLKSQGRWDESIRADMQQRQQNVAFFPHCHLKSASTGQRFILAVKENRMPQSCVGVFNAYGLSNSATVPHF
>NZ_CP015567.1|WP_014325846.1|886178_887186_+|type-I-F-CRISPR-associated-protein-Csy3
MSKLSTPSVLAFERNLDISDAIFAQKDSKNDKDAPVPLRIREKSVRGTISNRLKNTITNDPAKLDAETEKANLQRVDVATLDDDKDTLVATFSVKVLPFTGRPNVCNDQDYQHQVMTTVAQYLSEQGMDELAKRYATNIANARWLWRNRMGAEKIKIEVTCGENTLHFDDAKQFSLNHFDHQDDKIHQIAKEIKQGLLGEKFVILYVTAYANMGYGQEVYPSQELVLDNSTNNRKSKILYEINQKAGMHSQKVGNAIRTIDTWYAEEVAFPIAAEPYGAVTTLGTAFRQPKTKKNDFYTLFDNWLLKGEVPPVEQQHYVMSVLIRGGVFGASGKE
>NZ_CP015567.1|WP_016504384.1|885192_886176_+|type-I-F-CRISPR-associated-protein-Csy2
MFQTDFYILFDHIKVQSANAISGPLSYGFPALTGLTGAMHALNRKLTHHPVQFGGVMVACHDYELQTYQNSAFSDRTFKQTRNPIKRNGETASIIEEGKIHLDLSLVVEVHVQDDRVFEALTDKTSQASQDFLQTCKNLLWQQRIAGGSVLEIGNVQLFNLEEDQDIPLALMPAFVLMDAKQELTNITEELKTGLRIGQLDEEGNVQKSCLPSCPDATALDALLEMATVHHIPEHANATASAWQTYSVKKGRGWLVPLPVGYQAISPLFAPGQLQHCRTQQYPSQYVETLYSLGKWVFPLSLPENLSQCFWRYTALQNNLYLISQGE
>NZ_CP015567.1|WP_016504385.1|883848_885183_+|type-I-F-CRISPR-associated-protein-Csy1
MSHTFRKRIDLFLQEQNLKKSESDRKKLAKATDPTEIEQLTQLIQEFDQKYQFDTWIANAANVMAKQLKFGTHIAKGIHPDTKGDNVNFQPSDSLPPEYVGSQSVSHLVLDANGNAAALPLASFFNFIVDEEKQVKLRDLLLADDPRLAGCFSDDLALSDVYKKQFQQALTGDLTQPETHERNKQVFWANGENPIEDDDYTCLIPLYPSSLTHAFYQKVNNNRYSEQNKQARENRQKKTVEQTHYLSINQLATVVLGGSKPQNISQLMSAQGGRNYLLPSLPPIIPSSRYFRLSPLQTTIFNDRLAYACRYGLRQLFEVVEARKNVYQVRDSRIDALNNILRTFLFHANLLQKQPAGWSKDSQLEMCEKYWLDPKRVHLPDEEAFRAEYEKGEWVAEVERRFALWLNKRLQKRFPHIAKDFDDVEYHEWRRNIRRTLRYRLRHP
>NZ_CP015567.1|WP_014325843.1|881458_883618_+|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL
MKQLFATTARGFEELLKVELTDLGAMDCQITQGGVHFHADEETQYRVLLWTRLASRILLPIVTCKVYSDLDLYSAVVGQNWLDYFDEKAHFMVDFNGTNREIRHTQFGAMRVKDGIVDYFERVGKPRPNVDKSQPDIRIHAYLNREELVISLDLSGDALHMRGYREDTGKAPLRETLAAAIVLRSGWQLGTPLVDPMCGSGTLLIEAAQMQANIAPQLHRLHWGFDFWKGHNQQAWDKVKGEAIELAEQTFNQNQKANFYGCDLDHRVLQKAKRNAQNAGVAHLIQWRQGDVAALKNPFVEAKGTVICNPPYGERLGTTPALIALYSVFGQRLKQQFADWNVSIFSGEPALLDCLRLRSHRQFKAKNGPLDCVQKNYHISARATASDENTQNLPEIDRTLSATQVAVDFANRLQKNSKKIEKWARQQGINAYRLYDADLPEYNLAVDRYDDHIVVQEYAAPKNIDENKARQRLLDAVTATLQVTGVETNKLILKVRQKQKGTNQYEKLANKGDYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMLGKMAKGKDVLNLFAYTGSATVHMALGGAKSTTTVDMSNTYLNWAEQNLLLNDLEGKQHKLIQADCLQWLARCDRQFDLIFVDPPTFSNSKRMEDSWDVQRDHIKLMTQLKRILRPNGTIVFSNNKRGFKMDVEGLETLGLSAVDITAKTLPLDFERNKQIHNCWVVRLKADL
>NZ_CP015567.1|WP_014325842.1|879276_881325_+|methionine--tRNA-ligase
MANSARDILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPIMLNADKLGITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLKESEHFFFDLPAFEGMLKAWIKSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFKIPDTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYFHSLFWPAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLNNRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIAEPELLAEFVEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREAELQAVCSMALQLFRVLAIYLKPVIPQIIARAEAFLQDELTWESLNRPLLNHAILPFKALAQRLDLKQIEAIVNETKEQFVAQQALEQKNSAKAEPASQVEPIAETISIEDFAKLDLRVAKVMKCEAVPESNKLLRFELDLGDHTRQVFSGIKEAYNNPAELEGRFVVVIANLAPRKMRFGVSEGMILSAGTGGDDLFLLNADQGVKPGMQVK
>NZ_CP015567.1|WP_014325841.1|877982_879095_-|iron-sulfur-cluster-carrier-protein-ApbC
MGILFSDSLTDSQKQAIQNTFQQFQHPSLQKDLVSLNAIKKIEKGGETLRIEISMPFAWNTAFEQLKSALSTELLTLAECKDIKWQLNYQIATLKRANSHPAVKGVKNIIAVTSGKGGVGKSTISVNLALALQRQGARVGILDADIYGPSIPHMLGVADQRPTSPDNQHITPIQAHHIFANSIGFLMEPDNATIWRGPMASSALSQLLQETLWPDLDYLVIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGVAMFERVSVPVLGIIENMSMHICSNCGHQETIFGTGGAERIAQKYNVKVLGQQALHIRLREDLDKGIPTVVAAPESDIAQSFMQLAEKVATELYWQGSVIPSEIMFKEVK
>NZ_CP015567.1|WP_005721273.1|877574_877844_+|30S-ribosomal-protein-S15
MSLSTEKKAAIVAEFGRDAKDTGSSEVQIALLTAQINHLQSHFATHKKDHHGRRGLLRMVSRRRKLLDYLKRTNLELYTSTIARLGLRR
>NZ_CP015567.1|WP_014325840.1|874504_877408_+|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MRTTTIKFSAITLALLSYCGTILADSHQEATELDTITVSSQQDEMNIKEKKIGETVKTASQLKRQQVQDSRDLVRYETGVTVVEAGRFGSSGYAIRGVDENRVAITVDGLHQAETLSSQGFKELFEGYGNFNNTRNSVEIETLKVAKIAKGADSVKVGSGSLGGAVLFETKDARDFLTEKDWHIGYKAGYSTADNQGLNAVTLAGRYQMFDALIMHSKRHGHELENYDYKNGRDIQGKEREKADPYTITKESTLVKFSFSPTENHRFTVASDTYLQHSRGHDLSYNLVATTHIQLDEKESRHANDLTKRKNVSFTYENYTVTPFWDTLKLSYSQQRITTRARTEDYCDGNELCDSYKNPLGLQFKDGQILDPAGNKIKLQGSGLSTQIVDENGKPFPTTTGTNNAAFSNNLRLRPTGFWLDCSVFDCNKPFTVYNISNGTYQAREVLLSEEITVDGKLYKTAKEEGGLPNYLILPNSKGYLPYDYKERDLNTNTKQINLDLTKTFLTFNIENNLSYGGVYSRIEKEMINKAGYEGRNPTWWADRILGQSSYCGYNALKCPKHEPLTSFLIPVEATTQSLYFANILKVHNMISIDLGYRYDHIKYNPEYTPGVTPKIPDDMVKGLFIPMPKEPQLKDFDYNYAKFGEAYKKWKEYLPKNAEENIAYIAQDKTFKKHSYSLGATFDPLNFLRVQVKYSKGFRAPTSDELYFTFKHPDFTILPNPVLKPEEAKNQEIALTVHDNWGFVSTSVFQTKYRHFIDLAYLGSRNLSNSVGGQAQARDFQVYQNVNVDNAKVKGLEINARLNLGYFWHVLDGFNTSYKFTYQRGRLDGDRPMNAIQPKASVFGLGYDHKENKFGADLYITRVSEKKAKDTYNMFYKEQGYKDSAVRWRSDDYTLVDAVGYIKPIKNLTLQFGVYNLTDRKYLTWESARSIKPFGTSNLINQKTGAGINRFYSPGRNFKLSAEITF
>NZ_CP015567.1|WP_005751227.1|873947_874463_+|heme-utilization-protein-HutZ
MTTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIARHARNLQEVPKVSLMLIEDESQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHGALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLVSFVHLVEGHQE
>NZ_CP015567.1|WP_005753659.1|888986_889967_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MRKTPYIPSSDLKTIMHSKRANIYYLEHCRVLLNGGRVEYVTDEGRESLYWNIPIANTSCLLLGSGTSITQAAMRELSKAGVMVGFCSGGGTPLFNGTEAEIGCEFFSPQSEYRPVMYLQQWCKFWFDDEKRLAVAKALQQQRLALLEPIWSKLEWVYSCEKLTALVTQYQHEFAQAAHSQALLAAEGRLTTKLYALANQATMNEPDFKRSERGKSIDLVNQFLDHGNYLAYGLGATACWVLGLPHGLAVLHGKTRRGGLVFDAADIIKDSMILPQAFISAQNGDSEKEFRQACIQNLLRFGALDIIIERLQQLALQGASDEYFAG
>NZ_CP015567.1|WP_014325848.1|889947_893268_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLVSQCQKNALTETRRILDQFAERCGDRVWQTAITQAGLETLYKMLRQTARKNTAVACYWTHRKNSAELLWIVGDRRQFNDQGRVPTNRTQRNILRAEEEIAWQDAYSLQILTALSALLHDVGKSSVGFQTKLDKTKNAPRVADSYRHEWISVRLFEAMIEGCQTDQAWLERLANWQVFEETNPTWFSKIIQDRPNENHFSDFAYLPPLARRVIWLITSHHRLPFTHDISRSQDCIKNLRKYAKLTFESLFKAYKPAVGWVSNGAEHPTPQAFWQFQRVATQSQAWQKHMARWAKKALNHPALFSVSENADPFLLLLARLCLMTGDHYYSAQDQNEKLGELNFPLLANTYRENHQPKQRLDEHLIGVCQTAVRFARLLPKFPRELPRIKQHKPFVQLAKDRFAWQNKAVNVARLLQKTSESQGFFGVNMASTGCGKTLANAKMMYALNDSKQGARFTIALGLRVLTLQTGSALKKRLHLSDQDLAVLVGGSAVKKLYALQQEKQNQLAQQGSESAEDWLEDMQVEGATYIESAVENEAVLSFLSKDDKTKKLLYAPIVSCTLDHLISASESVRGGHHIVPILRLLTSDLILDEPDDFAQEDLPALSRLVYLAGLFGSRVLLSSATLTPDFITGLFKAYQAGRKIYNQQKGIVAALPICCAWVDEFQQVQANCGQDEQFIQQHDEFVRKRAENLAKSPVRRQAEILSLPSLKPREGEDLHYGLLADTLLQKAMALHDLHGQTDPHSQKKVSVGLIRFSNIEPMIPLAKALFALQASEKFADYQVHLCCYHSRQLLLLRSYLEEKLDKILDRHTPEQLFQHEEIALPMSQYKAKNHLFIVLGSPVTEVGRDHDYDWAIVDPSSMRSIIQLAGRVWRHRAEKVAEQPNIALLPINWRGLKVRYQQKDVIYHRPGFESHQHKLATHKLDQLISQRDLAHIQATPRIVKPEVLQASTQLADLEHHAIASLLNHPSENLVNLYWDPRYCNYLLANLPLMSEFRKSMAELEVVCVPDEDSHWGFGFYRAQKRDEETLSALPEIQYEPIQQDKHAVVQPWLAAALDTVLSDLAEQLNVVSPEWIAPTYLCASLPQYDGKLDWHYNEVYGFW
>NZ_CP015567.1|WP_005753664.1|893325_895182_+|response-regulator
MKNIKYFTQKYVDWVIRLGRLRFSILGVIVLAILALCTQALLSLFIIGEVYWVDMIRSVVFGLISAPFVIYFFTVLVEKLERSRLGLAKMVENLRKEVSERVLAEKKLSIALDNIEKTSRDKTRLMATISHELRTPLNGIIGLSRILLDEKLTETQQNYLKTIHVSAISLGHIFSDIIDLEKIDARRIELNAKAVELNSFLNDISNVARLLAQQKKLAFQLVTDKNLPTWFMVDYARLSQILWNLIGNAVKFTQEGRITLNVKRVSEYQISFSVSDTGIGIPANELPRVFEMYYQVQSSGHKPLGSGIGLAISQTIAQLMGGDLYATSEMGKGSCFTLMLPVKEVEKPVRVQNQMPSTLNILLVEDIEVNVVVAKSVLEKLGYVVDVAMTGQQAIEKFEQQYYDLLLLDIQLPDMSGFAVAKYLREGYENGQYDFLPPLIALTANVMHDKKEYQAQGMDDVLRKPLSIEELTACLVEYFGHDVSLCLETPTTHQITQDATHFDVKMLSELVEMLGTDFVLKNLALFKETMPEYMQALMTAYSVYQQDESQKADVLSCAHKIKGAAASVGLKRIQQIAAQAQDPEQGEWTENIHDWVQQLAQYWLLDVEALERYLNKSV
>NZ_CP015567.1|WP_005725867.1|895322_895913_+|hypothetical-protein
MKIFAVLSAFLMPFVVPNTTVNGYKDLRFGMTIEQAKETKLCEDQWHLPADDDWRRVVRGYWVCDKFRFDDGYAVARLRFIGGQLKSIELKMPEYPKYPAELLLHVLEEKYGKTIEVEQRDLIEEDILQGKIRKRRKNESALLDTYQFAKGTVSLTLLTYNGIPQPAEIIYSAPELLLLEKKLEDRPQRRTLLRDL
>NZ_CP015567.1|WP_014325849.1|895976_896780_-|inositol-1-monophosphatase
MNPMLNIAIRAARKAGNVIAKGYERRDALQTTLKSTNDYVTNIDKASEEAIIEVIRKSYPDHTIITEESGALEGKDSDIQWVIDPLDGTTNFVKGLPHFSVSIAIRVKGRTEVGVVYDPIRNELFTAVRGEGAKINDMRLRVENKRDLAGTVLTTGFPFKQTRLMPMQFAMMNNLIQDCADFRRMGSAALDLCYVAAGRVDGYFEVGVKAWDIAAGDLIVREAGGLVCDFNGGHSYLTSGHLVAAAPRIVKEILNKIQPCLSDEFKK
>NZ_CP015567.1|WP_014325850.1|896993_897710_+|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQAKIVASFDEAVADCALVIGTSARLRHLQNSLIEPRECGTHAIVYAKQAPVAIVFGRERIGLTNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAFLSQQAMTESLSTIDNTYPTHTEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK
>NZ_CP015567.1|WP_005721326.1|897788_898253_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MKLTSKGRYAVTAILDIALNSNRGPVSLSDISERQHISLSYLEQLFAKLRRHGLVKSVRGPGGGYQLGLPANRISVGMVINAVNENIDVTRCLGRGDCQEGTECLTHSLWKELSLRIEAFLNEITLEELVEKNRQKRATIEFRGDFDNLIILDN
>NZ_CP015567.1|WP_005721328.1|898300_899515_+|IscS-subfamily-cysteine-desulfurase
MKLPIYLDYAATCPVDERVAKKMMEYLTVEGNFGNPASRSHKFGWQAEEAVDVARNHIADLIGADSREIVFTSGATESDNLAIKGAAHFYQSKGKHIITCKTEHKAVLDTCRQLEREGFEVTYLNPKSDGLIDLEELKNAMRDDTILVSIMHVNNEIGVIQDIAAIGELCRARKILFHVDATQSVGKLPINLAELKVDLMSMSSHKLYGPKGIGALYVSRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRICKEEMASEMPRLKALRDRLYNGLKDIEETYVNGSMEHRLDSNLNISFNYVEGESLMMALRDIAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRYTTEEEIDYTIELVKNAVAKLRELSPLWDMFKEGIDLNTIEWTHH
>NZ_CP015567.1|WP_005721377.1|899746_900133_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSNKVIDHYENPRNVGSLDKKDANVGTGMVGAPACGDVMQLQIKVSEEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDEAQAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKKEAK
>NZ_CP015567.1|WP_005721379.1|900202_900526_+|iron-sulfur-cluster-assembly-protein-IscA
MGISLTETAADRVRTFLANRGKGIGLRLGIKTSGCSGLAYVLEFVDELNPEDQVFEQHGVKIIVDAKSLVYLDGTELDFAKEGLNEGFKFNNPNVKDQCGCGESFHV

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Crispr_ID: NZ_CP015567_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015567_2

2211291-2214200

Unclear

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTATACGGCAGTTAAC	CRISPRCasFinder
TTTCTAAGCTGCCTATACGGCAGTTAAC	CRT
TTTCTAAGCTGCCTATACGGCAGTTAAC	PILER-CR

48 spacers

cas3

The CRISPR arrays of NZ_CP015567_2

>merge|NZ_CP015567|2|2211291-2214200|CRISPRCasFinder,CRT,PILER-CR
AATTGAAACTGCCTATACGGCAGTTAACACCAATCTGATAATCGAGCCAAGATCGCTTTATTTCTAAGCTGCCTACACGGCAGTTAACAAGAGCAGAAAACAGAAGAATTGGAAGATGACTTTCTAAGCTACCTACACGGCAGTTAACAGTGTAATTCCGCTCCGTTGCTTAAAATAATCTTTCTAAGCTGCCTACACGGCAGTTAACGTATGAGTTCGGCATTTGCAGAGCTTAAAGCTTTTCTAAGCTGCCTACACGGCAGTTAACTTGATCCTTTTACGCGTAAACAGAATGCTTTTTTTCTAAGCTGCCTATACGGCAGTTAACTATTCAGAATCAAAACGAATACCCAAAATTGCTTTCTAAGCTGCCTATACGGCAGTTAACGGTGAGTGGCCTGAGGATGCGGATAGGTGGGATTTCTAAGCTGCCTATACGGCAGTTAACGTTTAGAACTGCCAGATTCAGGTGCCTCATTCTTTCTAAGCTGCCTATACGGCAGTTAACGAAGATGACAAGAATTTAACTTTTGATCAGCTTTTCTAAGCTGCCTATACGGCAGTTAACCAAATGAACTCACTCGACCGATTGTGTGGCAATTTCTAAGCTGCCTATACGGCAGTTAACGTGCAATCGGCTTAATGTTAGTAACTATCATTTTTCTAAGCTGCCTATACGGCAGTTAACCTGTCTTTTGTCATCGACGGTCGATAACGCTCTTTCTAAGCTGCCTATACGGCAGTTAACGATCGCCGCTTTCGTCTTCGACTGCTGTCAAATTTCTAAGCTGCCTATACGGCAGTTAACTCCATCTCTTCTTCGTAATAACCGTTTGTTGCTTTCTAAGCTGCCTATACGGCAGTTAACTGCGGTCGTTTTTTAACGAAATTCGCGGAAGTTTTCTAAGCTGCCTATACGGCAGTTAACAAATTTGAAAGCGCAATGGCAGATGTAAAAAATTTCTAAGCTGCCTATACGGCAGTTAACCGTTTCTTCATTTCGCTTACGCTCCCGTTGATTTTCTAAGCTGCCTATACGGCAGTTAACTTAACTGGGCGAATAAAACAGCAAGTGCGGGTTTTCTAAGCTGCCTATACGGCAGTTAACACCGTTGAGACAAAAGATGTCGTTTGTGACAATTTCTAAGCTGCCTATACGGCAGTTAACAAAAAAGGTGATCGTAGCTTTCACGGCTATCAATTTCTAAGCTGCCTATACGGCAGTTAACTTCCGCAAACTGTATTTAAAAACATATCGATCTTTCTAAGCTGCCTATACGGCAGTTAACCTTTCTCTTTCGGCGATTTTCTCGGCAAGATTTTTCTAAGCTGCCTATACGGCAGTTAACGATTTCATCTTCCGCTTGACCCGTTACTAAACTTTCTAAGCTGCCTATACGGCAGTTAACATATGATATTTTTTCAAAGATAAACGGAAAGATTTCTAAGCTGCCTATACGGCAGTTAACTGTGCGCTTTTCGTCATTCGTTGCCCCAAATGTTTCTAAGCTGCCTATACGGCAGTTAACGATGCCTGATGACATGTCGCTTTGGGATAAATTTTCTAAGCTGCCTATACGGCAGTTAACGTTGAGAAAAATCAAAATACCGGGTTTTCAAATTTCTAAGCTGCCTATACGGCAGTTAACTTGATTTTAAAGGCGTGGAGGTTTCTTCAACGTTTCTAAGCTGCCTATACGGCAGTTAACTGAAATACACAACCGATATTGAAGGGGTAAATTTTCTAAGCTGCCTATACGGCAGTTAACTGAAATCTCTTAAATACTTCGGTTTTTTTCCTGTTTCTAAGCTGCCTATACGGCAGTTAACTTTAACAATGTTATGCGTTTTGTAGGGGTAATTTTCTAAGCTGCCTATACGGCAGTTAACCTCACGCAATCGCACAACAATTTTATTAATTTTTTCTAAGCTGCCTATACGGCAGTTAACTAAAATTATAACTGTCGTCGCTGGCTTGTAGTTTTCTAAGCTGCCTATACGGCAGTTAACATGGTGCACTGGGTAGCTTCGGTGAGCTAACATTTCTAAGCTGCCTATACGGCAGTTAACCTTCTGTGATACGAGTGTCCCTGATTGGTCGCTTTCTAAGCTGCCTATACGGCAGTTAACTAAATAATCAACTAATTAACAGTAGAGGATATTTTCTAAGCTGCCTATACGGCAGTTAACAATCCGCAGGATATTTGGGTATTTCCCGTAGTTTTCTAAGCTGCCTATACGGCAGTTAACTTAGATTTACCACATTATAGCGGTGAGGATATTTTCTAAGCTGCCTATACGGCAGTTAACGTTTTTCAGGTGGTTCCCCAAGGTGAGCTGTTTTTCTAAGCTGCCTATACGGCAGTTAACTATGCCTATGGTTATCCCTCCTCGCGCTTGGATTTCTAAGCTGCCTATACGGCAGTTAACCCGACCAAGCCCAATGAAAAACAATATATAGATTTCTAAGCTGCCTATACGGCAGTTAACTCAGAGCTATGCTGTTTGTAACTACGGACGAATTTCTAAGCTGCCTATACGGCAGTTAACTTGCTGTTGCAATTATCAAGCGCGGCAGTCATTTTCTAAGCTGCCTATACGGCAGTTAACGGTTGCAACAAATGCGTGATGAGCATTCAAAATTTCTAAGCTGCCTATACGGCAGTTAACACACGATACTCTCCCCCGTCCTAAGCTCCGACTTTCTAAGCTGCCTATACGGCAGTTAACGTGCATTACGACATGGTGAAGGTGACGGATAATTTCTAAGCTGCCTATACGGCAGTTAACAGAATAATGGTTGCGACAAGCGACCTTATGGATTTCTAAGCTGCCTATACGGCAGTTAACAGAAAAATACAGAGTATTGGCGCGCTACCAGTTTTCTAAGCTGCCTATACGGCAGTTAAC

>NZ_CP015567|2|2|2211291-2214200|CRISPRCasFinder
AATTGAAACTGCCTATACGGCAGTTAAC	ACCAATCTGATAATCGAGCCAAGATCGCTTTA
TTTCTAAGCTGCCTACACGGCAGTTAAC	AAGAGCAGAAAACAGAAGAATTGGAAGATGAC
TTTCTAAGCTACCTACACGGCAGTTAAC	AGTGTAATTCCGCTCCGTTGCTTAAAATAATC
TTTCTAAGCTGCCTACACGGCAGTTAAC	GTATGAGTTCGGCATTTGCAGAGCTTAAAGCT
TTTCTAAGCTGCCTACACGGCAGTTAAC	TTGATCCTTTTACGCGTAAACAGAATGCTTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTCAGAATCAAAACGAATACCCAAAATTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGTGAGTGGCCTGAGGATGCGGATAGGTGGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTAGAACTGCCAGATTCAGGTGCCTCATTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GAAGATGACAAGAATTTAACTTTTGATCAGCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAAATGAACTCACTCGACCGATTGTGTGGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAATCGGCTTAATGTTAGTAACTATCATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTGTCTTTTGTCATCGACGGTCGATAACGCTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATCGCCGCTTTCGTCTTCGACTGCTGTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCATCTCTTCTTCGTAATAACCGTTTGTTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGCGGTCGTTTTTTAACGAAATTCGCGGAAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAATTTGAAAGCGCAATGGCAGATGTAAAAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGTTTCTTCATTTCGCTTACGCTCCCGTTGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTAACTGGGCGAATAAAACAGCAAGTGCGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACCGTTGAGACAAAAGATGTCGTTTGTGACAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAAAGGTGATCGTAGCTTTCACGGCTATCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTCCGCAAACTGTATTTAAAAACATATCGATC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTTCTCTTTCGGCGATTTTCTCGGCAAGATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATTTCATCTTCCGCTTGACCCGTTACTAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATATGATATTTTTTCAAAGATAAACGGAAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTGCGCTTTTCGTCATTCGTTGCCCCAAATG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATGCCTGATGACATGTCGCTTTGGGATAAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTGAGAAAAATCAAAATACCGGGTTTTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTTAAAGGCGTGGAGGTTTCTTCAACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGAAATACACAACCGATATTGAAGGGGTAAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGAAATCTCTTAAATACTTCGGTTTTTTTCCTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTAACAATGTTATGCGTTTTGTAGGGGTAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTCACGCAATCGCACAACAATTTTATTAATTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTATAACTGTCGTCGCTGGCTTGTAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGGTGCACTGGGTAGCTTCGGTGAGCTAACA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCTGTGATACGAGTGTCCCTGATTGGTCGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAATAATCAACTAATTAACAGTAGAGGATAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	AATCCGCAGGATATTTGGGTATTTCCCGTAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTAGATTTACCACATTATAGCGGTGAGGATAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTTTCAGGTGGTTCCCCAAGGTGAGCTGTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATGCCTATGGTTATCCCTCCTCGCGCTTGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCGACCAAGCCCAATGAAAAACAATATATAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAGCTATGCTGTTTGTAACTACGGACGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGCTGTTGCAATTATCAAGCGCGGCAGTCAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGTTGCAACAAATGCGTGATGAGCATTCAAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACACGATACTCTCCCCCGTCCTAAGCTCCGAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCATTACGACATGGTGAAGGTGACGGATAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGAATAATGGTTGCGACAAGCGACCTTATGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGAAAAATACAGAGTATTGGCGCGCTACCAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC

>NZ_CP015567|2|2|2211291-2214200|CRT
AATTGAAACTGCCTATACGGCAGTTAAC	ACCAATCTGATAATCGAGCCAAGATCGCTTTA
TTTCTAAGCTGCCTACACGGCAGTTAAC	AAGAGCAGAAAACAGAAGAATTGGAAGATGAC
TTTCTAAGCTACCTACACGGCAGTTAAC	AGTGTAATTCCGCTCCGTTGCTTAAAATAATC
TTTCTAAGCTGCCTACACGGCAGTTAAC	GTATGAGTTCGGCATTTGCAGAGCTTAAAGCT
TTTCTAAGCTGCCTACACGGCAGTTAAC	TTGATCCTTTTACGCGTAAACAGAATGCTTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTCAGAATCAAAACGAATACCCAAAATTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGTGAGTGGCCTGAGGATGCGGATAGGTGGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTAGAACTGCCAGATTCAGGTGCCTCATTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GAAGATGACAAGAATTTAACTTTTGATCAGCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAAATGAACTCACTCGACCGATTGTGTGGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAATCGGCTTAATGTTAGTAACTATCATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTGTCTTTTGTCATCGACGGTCGATAACGCTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATCGCCGCTTTCGTCTTCGACTGCTGTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCATCTCTTCTTCGTAATAACCGTTTGTTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGCGGTCGTTTTTTAACGAAATTCGCGGAAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAATTTGAAAGCGCAATGGCAGATGTAAAAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGTTTCTTCATTTCGCTTACGCTCCCGTTGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTAACTGGGCGAATAAAACAGCAAGTGCGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACCGTTGAGACAAAAGATGTCGTTTGTGACAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAAAGGTGATCGTAGCTTTCACGGCTATCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTCCGCAAACTGTATTTAAAAACATATCGATC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTTCTCTTTCGGCGATTTTCTCGGCAAGATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATTTCATCTTCCGCTTGACCCGTTACTAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATATGATATTTTTTCAAAGATAAACGGAAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTGCGCTTTTCGTCATTCGTTGCCCCAAATG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATGCCTGATGACATGTCGCTTTGGGATAAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTGAGAAAAATCAAAATACCGGGTTTTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTTAAAGGCGTGGAGGTTTCTTCAACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGAAATACACAACCGATATTGAAGGGGTAAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGAAATCTCTTAAATACTTCGGTTTTTTTCCTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTAACAATGTTATGCGTTTTGTAGGGGTAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTCACGCAATCGCACAACAATTTTATTAATTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTATAACTGTCGTCGCTGGCTTGTAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGGTGCACTGGGTAGCTTCGGTGAGCTAACA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCTGTGATACGAGTGTCCCTGATTGGTCGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAATAATCAACTAATTAACAGTAGAGGATAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	AATCCGCAGGATATTTGGGTATTTCCCGTAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTAGATTTACCACATTATAGCGGTGAGGATAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTTTCAGGTGGTTCCCCAAGGTGAGCTGTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATGCCTATGGTTATCCCTCCTCGCGCTTGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCGACCAAGCCCAATGAAAAACAATATATAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAGCTATGCTGTTTGTAACTACGGACGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGCTGTTGCAATTATCAAGCGCGGCAGTCAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGTTGCAACAAATGCGTGATGAGCATTCAAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACACGATACTCTCCCCCGTCCTAAGCTCCGAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCATTACGACATGGTGAAGGTGACGGATAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGAATAATGGTTGCGACAAGCGACCTTATGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGAAAAATACAGAGTATTGGCGCGCTACCAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC

>NZ_CP015567|2|2|2211351-2213960|PILER-CR
TTTCTAAGCTGCCTACACGGCAGTTAAC	AAGAGCAGAAAACAGAAGAATTGGAAGATGAC
TTTCTAAGCTACCTACACGGCAGTTAAC	AGTGTAATTCCGCTCCGTTGCTTAAAATAATC
TTTCTAAGCTGCCTACACGGCAGTTAAC	GTATGAGTTCGGCATTTGCAGAGCTTAAAGCT
TTTCTAAGCTGCCTACACGGCAGTTAAC	TTGATCCTTTTACGCGTAAACAGAATGCTTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTCAGAATCAAAACGAATACCCAAAATTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGTGAGTGGCCTGAGGATGCGGATAGGTGGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTAGAACTGCCAGATTCAGGTGCCTCATTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GAAGATGACAAGAATTTAACTTTTGATCAGCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAAATGAACTCACTCGACCGATTGTGTGGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAATCGGCTTAATGTTAGTAACTATCATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTGTCTTTTGTCATCGACGGTCGATAACGCTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATCGCCGCTTTCGTCTTCGACTGCTGTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCATCTCTTCTTCGTAATAACCGTTTGTTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGCGGTCGTTTTTTAACGAAATTCGCGGAAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAATTTGAAAGCGCAATGGCAGATGTAAAAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGTTTCTTCATTTCGCTTACGCTCCCGTTGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTAACTGGGCGAATAAAACAGCAAGTGCGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACCGTTGAGACAAAAGATGTCGTTTGTGACAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAAAGGTGATCGTAGCTTTCACGGCTATCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTCCGCAAACTGTATTTAAAAACATATCGATC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTTCTCTTTCGGCGATTTTCTCGGCAAGATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATTTCATCTTCCGCTTGACCCGTTACTAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATATGATATTTTTTCAAAGATAAACGGAAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTGCGCTTTTCGTCATTCGTTGCCCCAAATG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GATGCCTGATGACATGTCGCTTTGGGATAAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTGAGAAAAATCAAAATACCGGGTTTTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTTAAAGGCGTGGAGGTTTCTTCAACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGAAATACACAACCGATATTGAAGGGGTAAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGAAATCTCTTAAATACTTCGGTTTTTTTCCTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTAACAATGTTATGCGTTTTGTAGGGGTAAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTCACGCAATCGCACAACAATTTTATTAATTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTATAACTGTCGTCGCTGGCTTGTAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGGTGCACTGGGTAGCTTCGGTGAGCTAACA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCTGTGATACGAGTGTCCCTGATTGGTCGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAATAATCAACTAATTAACAGTAGAGGATAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	AATCCGCAGGATATTTGGGTATTTCCCGTAGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTAGATTTACCACATTATAGCGGTGAGGATAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTTTCAGGTGGTTCCCCAAGGTGAGCTGTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATGCCTATGGTTATCCCTCCTCGCGCTTGGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCGACCAAGCCCAATGAAAAACAATATATAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAGCTATGCTGTTTGTAACTACGGACGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGCTGTTGCAATTATCAAGCGCGGCAGTCAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGTTGCAACAAATGCGTGATGAGCATTCAAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015567.1\|WP_014326409.1\|2204530_2205973_+\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NZ_CP015567.1\|WP_014326407.1\|2202769_2203381_-\|high-frequency-lysogenization-protein-HflD	unknown	unknown	gnl\|CDD\|225467
NZ_CP015567.1\|WP_014326414.1\|2210273_2211239_+\|lipopolysaccharide-heptosyltransferase-RfaC	unknown	unknown	gnl\|CDD\|236809
NZ_CP015567.1\|WP_005724904.1\|2201374_2202742_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP015567.1\|WP_005758065.1\|2199429_2201016_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP015567.1\|WP_014326411.1\|2207214_2208639_+\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_CP015567.1\|WP_014326410.1\|2205998_2207018_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131470
NZ_CP015567.1\|WP_014326415.1\|2215787_2216501_+\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP015567.1\|WP_005752888.1\|2224434_2224770_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP015567.1\|WP_014326412.1\|2208754_2209162_+\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|225403
NZ_CP015567.1\|WP_005724855.1\|2220512_2221172_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP015567.1\|WP_014326413.1\|2209230_2210277_+\|lipopolysaccharide-heptosyltransferase-II	unknown	unknown	gnl\|CDD\|182835
NZ_CP015567.1\|WP_005719208.1\|2221810_2222239_+\|DUF2489-domain-containing-protein	unknown	unknown	gnl\|CDD\|378470
NZ_CP015567.1\|WP_005758057.1\|2214347_2215676_-\|ATP-dependent-RNA-helicase-SrmB	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236877
NZ_CP015567.1\|WP_005724867.1\|2216548_2217253_-\|nicotinamide-riboside-transporter-PnuC	unknown	unknown	gnl\|CDD\|225742
NZ_CP015567.1\|WP_016504355.1\|2203566_2204493_+\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|236514
NZ_CP015567.1\|WP_014326419.1\|2223670_2224339_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_CP015567.1\|WP_014326417.1\|2221235_2221805_+\|Der-GTPase-activating-protein-YihI	unknown	unknown	gnl\|CDD\|367878
NZ_CP015567.1\|WP_014326416.1\|2217528_2220432_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP015567.1\|WP_016504414.1\|2222262_2223630_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430

Protein	Function_ID	Function_description	E-value
NZ_CP015567.1\|WP_014326409.1\|2204530_2205973_+\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	1.07246e-174
NZ_CP015567.1\|WP_014326407.1\|2202769_2203381_-\|high-frequency-lysogenization-protein-HflD	gnl\|CDD\|225467	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only].	9.09394e-109
NZ_CP015567.1\|WP_014326414.1\|2210273_2211239_+\|lipopolysaccharide-heptosyltransferase-RfaC	gnl\|CDD\|236809	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC.	0
NZ_CP015567.1\|WP_005724904.1\|2201374_2202742_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP015567.1\|WP_005758065.1\|2199429_2201016_-\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	6.14413e-167
NZ_CP015567.1\|WP_014326411.1\|2207214_2208639_+\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NZ_CP015567.1\|WP_014326410.1\|2205998_2207018_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|131470	TIGR02417, Fructose_repressor_Catabolite_repressor/activator., D-fructose-responsive transcription factor. Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer. [Regulatory functions, DNA interactions].	0
NZ_CP015567.1\|WP_014326415.1\|2215787_2216501_+\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.77606e-93
NZ_CP015567.1\|WP_005752888.1\|2224434_2224770_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.65249e-05
NZ_CP015567.1\|WP_014326412.1\|2208754_2209162_+\|copper-chaperone-PCu(A)C	gnl\|CDD\|225403	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and metabolism].	1.12449e-42
NZ_CP015567.1\|WP_005724855.1\|2220512_2221172_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	6.19774e-102
NZ_CP015567.1\|WP_014326413.1\|2209230_2210277_+\|lipopolysaccharide-heptosyltransferase-II	gnl\|CDD\|182835	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF.	0
NZ_CP015567.1\|WP_005719208.1\|2221810_2222239_+\|DUF2489-domain-containing-protein	gnl\|CDD\|378470	pfam10675, DUF2489, Protein of unknown function (DUF2489). This is a bacterial family of uncharacterized proteins.	1.12596e-47
NZ_CP015567.1\|WP_005758057.1\|2214347_2215676_-\|ATP-dependent-RNA-helicase-SrmB	gnl\|CDD\|236877	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional.	0
NZ_CP015567.1\|WP_005724867.1\|2216548_2217253_-\|nicotinamide-riboside-transporter-PnuC	gnl\|CDD\|225742	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism].	5.27246e-73
NZ_CP015567.1\|WP_016504355.1\|2203566_2204493_+\|aminoimidazole-riboside-kinase	gnl\|CDD\|236514	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional.	0
NZ_CP015567.1\|WP_014326419.1\|2223670_2224339_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	3.45531e-76
NZ_CP015567.1\|WP_014326417.1\|2221235_2221805_+\|Der-GTPase-activating-protein-YihI	gnl\|CDD\|367878	pfam04220, YihI, Der GTPase activator (YihI). YihI activates the GTPase activity of Der, a 50S ribosomal subunit stability factor. The stimulation is specific to Der as YihI does not stimulate the GTPase activity of Era or ObgE. The interaction of YihI with Der requires only the C-terminal 78 amino acids of YihI. A yihI deletion mutant is viable and shows a shorter lag period, but the same post-lag growth rate as a wild-type strain. yihI is expressed during the lag period. Overexpression of yihI inhibits cell growth and biogenesis of the 50S ribosomal subunit. YihI is an unusual, highly hydrophilic protein with an uneven distribution of charged residues, resulting in an N-terminal region with high pI and a C-terminal region with low pI.	8.55528e-59
NZ_CP015567.1\|WP_014326416.1\|2217528_2220432_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP015567.1\|WP_016504414.1\|2222262_2223630_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0

>NZ_CP015567.1|WP_014326414.1|2210273_2211239_+|lipopolysaccharide-heptosyltransferase-RfaC
MKICLIKTSSMGDILHSLPALTDAQRALPNLQVDWVVEESFAEIPHWHSAVRQVIPIALRRWRKTPFTALTRKQWKTYRTLLQSEQYDAVIDAQGLLKSALFATRLARGTRHGYDRHSIREPIAACFYDKKYAISYQQHAVERIRQLFAQSLNYPLPHTQGDYGIARHFPQHAQTMPYVLFFHGTTRQDKFLPDKQWRTLAEKLTAQGIQIHVPWSNPQEKQRAERIAQGLDLVTILPKSTLSELAQQIVNASAVVSVDTGLAHLSAALDKTNLTLYGATDPKLIGSYGKNQHYLVAESMDKIEADEIFQKLTALLSLNTI
>NZ_CP015567.1|WP_014326413.1|2209230_2210277_+|lipopolysaccharide-heptosyltransferase-II
MHILIIGPSWVGDMMMSHSLYQTLKQQYPQCEIDVMAPNWCKPLLERMPEVRQAITMPLGHGAFALGDRYRLGKALRHQYDMAIVLPNSLKSAFIPFFAKIPLRRGWKGESRYLFLNDLRSNKKDYPMMVQRYIALAFEKGAVPKAEDLPRPVPYLTVDPITQQHTLKKFEKQTALISPRPSIGFCPGAEFGPAKRWPHYHYAKLAEMLIQQGYAIRLFGSAKDEAVGEEIRQALPETMRHFCINLAGQTSLNEAVDLIADCTAIVTNDSGLMHIAAAVQRPLVALYGPTSPTYTPPLSEKAVIIRLIEDGLIKVRKGKDSDEGYHQSLIDIQPELVFDKLTGLLANT
>NZ_CP015567.1|WP_014326412.1|2208754_2209162_+|copper-chaperone-PCu(A)C
MKSLTQLLFILTALLPTSLFAHIHVEQAQMFSAKAGEPSAIFMNIHNTGNEDVSLALVQSDIRADIVLHGTQHGKMIEVTGINLPAHQMTALKRGGLHIMVFNVEQDLNAGDSFPLRLLFDNGEIMHIEAKIIQY
>NZ_CP015567.1|WP_014326411.1|2207214_2208639_+|PTS-sucrose-transporter-subunit-IIBC
MNFSQIAQQVIDKLGGKDNISAAAHCATRLRIVVKNENLIDKKGIENIEGVKGQFAVAGQYQIIFGSGTVNKVYAELSKLLGIGDMTTSEVAAAGTEKQGLLQRLVKGLADIFVPIIPAIVAGGLLMGIHSMLTAKGFFVEEKNVVDLYPAIADLVDFINTIANAPFVFLPVLLGFSATRKFGGNPFLGAALGMLLVHPALSDGWNYALTLTKGNIQYWHIFGLEIERVGYQGTVIPVLVASWVLATLEKNLRKVVPSFLDNLITPLFALFITGLLAFTVIGPIGREAGSLISTGLTWLYDTLGFVGGAIFGTLYAPIVITGMHQTFIAVETQLLAEVARTGGTFIFPIAAMSNIAQGAACLGAAYVMKDAKVRGIGVPSGISALLGITEPAMFGVNLRYRYPFISAMIGAGISSAVIALFNVKAIALGAAGLPGIPSIKPDSLAMYCVGMLISASIAFTLTVILGKRAQLKAE
>NZ_CP015567.1|WP_014326410.1|2205998_2207018_+|substrate-binding-domain-containing-protein
MSITNKKRITLSDIAKCCGLSTTTVSMILNNRGEEFKIKAETCQRVKAIAEQQGYRANVYAKSLKMQRSNVIGFVIPDLTNYGFACTAKILEKQCRENGLQLIITCSDDNPQQEKLAIERLLDRQIDFLITAPTHQDPSYYQKIGQHTPILQLDRYVPDLALNYVISNDSEHITALICRLCDQYQLTEFMYFGGQRTLSPSESRLAGFLQGLKQANLNLKKEWILHRTYQPESGYQMLAETEAKLGRLPQAIFTASYTLLEGVLRYLTEQKKMDLLLNRQLHLATFDDHDILNALPFHIHSIKQNHPQLAQQIFQHIMRYFAGKKSPNQKIDCDVIYRD
>NZ_CP015567.1|WP_014326409.1|2204530_2205973_+|glycoside-hydrolase-family-32-protein
MYIFNQGKYKSLHAQEVGELAQIRQHVLRDTQFRPTYHLAPETGLLNDPNGLVFDGEKYHIFYQWFPYAAIHGMKHWKHFITYDFHHFQAADPLIPDELFESHGCYSGGALLWQDQIVAFYTGNTRNAENQRIPHQNIAIFKKDGTLLKKRCLLNQAPTGYTEHVRDPKPFITEEGKIRFILGAQREDLSGTALIYEMTDLDATPQLIGEFKLPDFDNQQVFMWECPDLLKLQEQDLFLWSPQGKAQKTYCFQNHYHATYALGQYANLHFSAQHIEELDYGFDFYAPQSIQGSEGIYYAWVGLPDLTYPTDEYQWHSMLSLPRQFSIQQGILYQRPIPQVYAQCLPVHKYWVEGKQQIPHLDRSYVAFDAENQPFTLRFFTNQRGQQLILRYQNGILTLDRTYTTQTALMQQFGEQRHCILPQLNHVEIFFDRSVVEIFLNQGEKVMTSRFFIADRENALDSSRPLCVSVAELKPIILTP
>NZ_CP015567.1|WP_016504355.1|2203566_2204493_+|aminoimidazole-riboside-kinase
MGKIWVLGDAVVDLIPEGENTYLRCAGGAPANVAVGIARLGATTGFIGRVGDDPLGRFMLNKLQQENVCTQYMHLDPKQLTSTVIVDLKEGERSFTFMVNPSADQFLELSDLPHFNPNDWLHCCSIALINEPSRSSTFAAIHRIKAEGGFFSFDPNLRESLWNSPAEMKTVVNQVVALADVLKFSEEELLFLTDSDTLSDATAKLTQHYPDKLIIVTLGKLGATYYLQGKSQLISSKKALIPVDTTGAGDAFVSGLLFGISQVKNWQNPTALVEIIKQANACGALATTAKGAMSALPNKQQLDAFLAE
>NZ_CP015567.1|WP_014326407.1|2202769_2203381_-|high-frequency-lysogenization-protein-HflD
MANYYDITLALAGVCQAAKLVQQFAHEGQADQAAFETSLNTLLQIYPEDTLAVFGGKAQNLKLGLETLLEQMHGTGSDLSRYWISLLALESKLNKDPHAKAELARRIQYLPTQLEHDDLLDEQMLSTLASIYVDVISPLGKKIQVTGSTLYLQQLAMHHRIRACLLAGIRSAVLWRQVGGTKWQVLFSRRKIIAMAKQIYSSL
>NZ_CP015567.1|WP_005724904.1|2201374_2202742_-|adenylosuccinate-lyase
MQLNALTALSPIDGRYQDKVSSLRSIFSEFGLLKFRVTVEVRWLQKLAATDQIQEVSLLSQEANDYLNHIVENFSVQDAERIKEIERTTNHDVKAVEYFLKEKSEALPELAKISEFIHFACTSEDINNLSHALMLKTAREEVILPEWQNLIADISALANEYKTIPLLSRTHGQPASPSTIGKEMANVVYRLQRQFKQLQQIDILGKINGAVGNYNAHLSAYPDIDWHQFSEEFVTSLGLTWNPYTTQIEPHDYIAEFFDNVARFNTIIIDFDRDLWGYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGAKLPVSRWQRDLTDSTVLRNLGVGLGYCLIAYAATRKGISKLEVNEQHLRDELDQNWEVLAEPIQTVMRRYGIEKPYEKLKALTRGKRVDAEAMREFIETLDIPAQEKIRLQQMTPATYIGAAVELVEKL
>NZ_CP015567.1|WP_005758065.1|2199429_2201016_-|L-lactate-permease
MVFFLSILPIVLLIYLMVKRNSLPSYIALPLIAVLTYLLQAFYFGTDLTRLNANVIAGLIATQTPITIIFGAILFNRMMEVSGSTDVLRKWLANINPNPVAQIMIIGWAFAFMIEGASGFGTPAAIAAPILMGLGFKPLQVAMLALVMNSVPVSFGAVGTPTWFGFGPLGLSEDVVLEVGQKTAFIHFIAAFVIPVLALRFLVSWQQIKQNLVFIYISILACTIPYFLLAQVNYEFPALVGGAIGLFISILVANKGIGVSKTAQAEIQLEKVEFGVLVKALFPTMMLIAILIVTRIHQLGIKQLLNDATTWFSVSLGAFGEFKVSQALILSLNNILGQGINESYKTLYVPSLIPFIVTVIISIFVFKLNGTKAKTIAVSTYQQTKKPFFALLGALVMVKLMLVGNENYDSMVITIGKTFADVTGDKWVYFSSYLGAIGAFFSGSNTVSNLTFGGIQLSIAETTGMSVPLILALQSVGGAMGNMVCLNNIIAVCTVLNVSNQEGSILKRTVVPMFLYGVIAALVAVVIY
>NZ_CP015567.1|WP_005758057.1|2214347_2215676_-|ATP-dependent-RNA-helicase-SrmB
MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHGEIFNSNQDIVVATPGRLLQYIKEENFDCRSVEILIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFASRLLTDPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLARFIDEEQVSRGIVFVRRREDVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVTVLVATDVAARGIDIEDVSHVMNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLLGKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKARIKAKREEKQKQEQKKKVKLRHKDTKNIGKRRKSNTPPANAE
>NZ_CP015567.1|WP_014326415.1|2215787_2216501_+|tRNA1(Val)-(adenine(37)-N6)-methyltransferase
MSAKQNGFTFKQFHIEHHRCAMKVGTDGILLGAWADVSQAERILDLGTGTGLIALMLAQRSTKESEIHAVELDQAAYLQAQANIHASPWAQRVHVYQQDAAEFCRNAVNKFDLIVANPPYFPQGVDCATPQRDLARYTATHRHVDWLNWASHCLSEQGKISMVLPFEAGETLLKQTALYCIARCEVITKKGKAPQRLLLTFSLQAQPLQPSQLIIYDESNRYHPDFIGLTKDFYLAF
>NZ_CP015567.1|WP_005724867.1|2216548_2217253_-|nicotinamide-riboside-transporter-PnuC
MNLQAVKNEFLGGWKPFEVAWLSLFLIAQIVIYIQNPDSILGMISGISGILCVVFVSKGKVSNYFFGLIFAYTYFYVAWQANYLGEMNTVLYVYIPAQFIGYFLWRENLQKGSEGAESVIAKSLTLKGWAIVLGTITIGTLLFVQALNAAGGSSTGLDGLTTVIVVVAQLLMILRYREQWLLWIALNVISIVLWTQAKEGSLAMVTMYSAYLLNSLYGYYNWTKLEKAHRQSVQ
>NZ_CP015567.1|WP_014326416.1|2217528_2220432_+|RNA-polymerase-associated-protein-RapA
MTFAVGQRWMSESENNLGLGLIVAIDMRTVTILFPASEEQRIYALNSAPLTRVLFQIGDEIVHHEGWKGNVLDILENNGVAFYLLKRQDNGEEITIQERDIAHQMTFSKPQDRLFTTQIDRNEHFTLRYQALTHQQAQFQSPLRGLRGIRAGLIPHQLHIAREVGQRTAPRVLLADEVGLGKTIEAGMILQQQLFAEKVERVLIIVPETLQHQWLVEMLRRFNLHFALFDEERCADFEDPASALWINPFSTESQIICALDWLCEKPKRVEQLLEAGFDMLIVDEAHHLGWSEHNPSLEYQLVEQLARQIPAVLLLTATPEQLGQESHFARLSLLDPDRFYDYQAFVQEQQQYQPVADAVQSLLADKPLSTVEKNHIADLLSEQDVEPMLKVIDSQAHDEQKALARQELIDNLIDRHGTSRVLFRNTRQGVKSFPHRTYNQITLELPKQYNNAANVLAMLGEKSENDSFYPEQMFQKLNPDARWWEFDPRLAWLITFLKNHREEKVLVICRHANTAIQLEQALREKEAIRAAVFHEKLSIVERDRAAAYFAQQEDGAQVLLSSSIGSEGRNFQFASHLVLFNLPDDPDLLEQCIGRLDRIGQSRDIQIHVPCFADTAQVVLARWYHEGLNAFEETCPMGMTLFETHQTQLNKFLQKPTALEGFAEFVSLTRKQQHELKQALEKGRDRLLELNSNGGEQAQQLATDIAEQDSTTELVNFTLNLFDIIGVDQEDLGEKSIVITPASNMLVPDFPGLKEEGATVTFDRQLSLAREDVEFMSWDHPLIRHGIDLITSGDIGKSAVSLLINKALPAGTLLLEMIYVVEAQAPKGLQLTRFLPPTPIRLLLDQKGNNLAEQVSFNALQKQLKPIGKNMANKVVKMVRPNIEQLVKLSEQKIVAQAQQIIHNTQQLADQTLSAELNRLTALQAVNKNIRQDEVDALENIRSQSLAQLQQATWRLDSLRVIVSNKE
>NZ_CP015567.1|WP_005724855.1|2220512_2221172_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MALISYTPPTDPYLDIVHYDDHFVVINKPSGLLSVPGNQPQYYDSAMSRVKEKYGFCEPAHRLDMSTSGLILFALSKAADRELKRQFREREPKKHYQALVWGHLEEDQGEVNLPLICDWENRPRQKICFERGKPALTLYEVLARYPNNTTRVKLTPITGRSHQLRLHMLALGHPILGDKFYAPPQAKALSPRLCLHAEQLAFRHPITQEWLSFSAPPAF
>NZ_CP015567.1|WP_014326417.1|2221235_2221805_+|Der-GTPase-activating-protein-YihI
MARKKKTRRVSDIMPARKVDKKVELPKGKPGKKLTRYELDAKAREDKKKKKRKGLASGSRHSATENNNKHQALEKKDPRIGSRKKVPLVVEFVNKPEKGMTIPPMKLEEKLPKQDPMLELELLESNECLNQLLDDLEAGKTLSAEDQQFVDDCLDRIAELMDELGISEDDDPEEDLLRTFEKIDINQFR
>NZ_CP015567.1|WP_005719208.1|2221810_2222239_+|DUF2489-domain-containing-protein
MWTNILLILAVLVIVAMASYAGYLLLALQKQKKAIANMRTARSQRLTESIVIIAKAMQNGDCNHSEGVIRLKMLLDPLGKKLKNYQAMYQLYEVVMEMPTHEKRRELKKNERMRLDLQRESAEAELEQKIRLELQQLLIDMK
>NZ_CP015567.1|WP_016504414.1|2222262_2223630_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSDIVWDLALIQKYNQSGPRYTSYPTALEFNENYTNQDFIQATKRYPNRPLSLYVHIPFCHKLCYFCACNKTITRHQHKADIYLDFLEREIENRASLFKNRIATQVHWGGGTPTYLTEQQSARLMAMLRKHFTIAPDAEISIEMDPREIELNMLDHLRRIGFNRMSMGVQDFNKDVQKAINRVQDEDFIEALLKRARELGFQSTNLDLIYGLPLQNVDSFMFTLQKVIALNPDRLSVFNYAHLPSRFAGQAKIKNEQLPAPETKLTILQKMIETLGDAGYKFIGMDHFAKPDDELAIAQKQGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQNQKELKHYYTAIDNTGIALHKGFAMSEEDCLRRDVIKQLICNFKLDYQPIEQQYGIQFTSHFAEDLKLLAPLSEDGLLTIGEKDIQVSAKGRLLIRNICLCFDTYSREQAKRQQFSRII
>NZ_CP015567.1|WP_014326419.1|2223670_2224339_+|NAD(P)H-dependent-oxidoreductase
MSISKTDILNAFHFRHACKAYDPSKKISEEDFRFILETGRLSPSSFGFEPWKFLVIENPDIKALIRDTAWGAKDKVMDCSHFVVVLVRQPETLLADGEYVQHMMRDIHHIPEEMRKIRQNFYRTFSEQDFALTENPKAFYDWACRQSYIALANMLTSAAMIGIDSTPIEGFPLEKMDHIFVEQGLYDPKTYKLSVMIAFGYRLNEPKAKTRQAFDDVVEWVR
>NZ_CP015567.1|WP_005752888.1|2224434_2224770_-|helix-turn-helix-transcriptional-regulator
MQITRRNASTKGASVAEIDRKKVRNEIIQAMLMGELSQGEALRKLRIEMFGINQQHYIQLVKVSRQTLSNIENDKGNYSVETINKVFKPFGLELGLVPVSKALLKELFSTA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015567_2	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	NZ_CP015567.1	853985-854016	0	1.0
NZ_CP015567_2	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	NZ_CP015567.1	1372521-1372552	0	1.0
NZ_CP015567_2	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	NZ_CP015567.1	1701524-1701555	0	1.0
NZ_CP015567_2	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	NZ_CP015567.1	2062542-2062573	0	1.0
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	NZ_CP015567.1	853822-853853	0	1.0
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	NZ_CP015567.1	1372358-1372389	0	1.0
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	NZ_CP015567.1	1701687-1701718	0	1.0
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	NZ_CP015567.1	2062705-2062736	0	1.0
NZ_CP015567_2	2.34\|2213301\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213301-2213332	32	NZ_CP015567.1	1367199-1367230	0	1.0
NZ_CP015567_2	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	NZ_CP015567.1	855312-855343	0	1.0
NZ_CP015567_2	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	NZ_CP015567.1	1373848-1373879	0	1.0
NZ_CP015567_2	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	NZ_CP015567.1	1700197-1700228	0	1.0
NZ_CP015567_2	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	NZ_CP015567.1	2061215-2061246	0	1.0
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	NZ_CP015567.1	854386-854417	0	1.0
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	NZ_CP015567.1	1372922-1372953	0	1.0
NZ_CP015567_2	2.16\|2212219\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212219-2212250	32	NZ_CP015567.1	1364460-1364491	1	0.969
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP015567.1	854534-854565	1	0.969
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP015567.1	1373070-1373101	1	0.969
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP015567.1	1700975-1701006	1	0.969
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP015567.1	2061993-2062024	1	0.969
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	NZ_CP015567.1	1701123-1701154	1	0.969
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	NZ_CP015567.1	2062141-2062172	1	0.969

1. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 853985-854016, mismatch: 0, identity: 1.0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

2. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1372521-1372552, mismatch: 0, identity: 1.0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

3. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1701524-1701555, mismatch: 0, identity: 1.0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

4. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 2062542-2062573, mismatch: 0, identity: 1.0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

5. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 853822-853853, mismatch: 0, identity: 1.0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

6. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1372358-1372389, mismatch: 0, identity: 1.0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

7. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1701687-1701718, mismatch: 0, identity: 1.0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

8. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 2062705-2062736, mismatch: 0, identity: 1.0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

9. spacer 2.34|2213301|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1367199-1367230, mismatch: 0, identity: 1.0

atggtgcactgggtagcttcggtgagctaaca	CRISPR spacer
atggtgcactgggtagcttcggtgagctaaca	Protospacer
********************************

10. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 855312-855343, mismatch: 0, identity: 1.0

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccgtcctaagctccgac	Protospacer
********************************

11. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 1373848-1373879, mismatch: 0, identity: 1.0

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccgtcctaagctccgac	Protospacer
********************************

12. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 1700197-1700228, mismatch: 0, identity: 1.0

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccgtcctaagctccgac	Protospacer
********************************

13. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 2061215-2061246, mismatch: 0, identity: 1.0

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccgtcctaagctccgac	Protospacer
********************************

14. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 854386-854417, mismatch: 0, identity: 1.0

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgacatggtgaaggtgacggataa	Protospacer
********************************

15. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 1372922-1372953, mismatch: 0, identity: 1.0

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgacatggtgaaggtgacggataa	Protospacer
********************************

16. spacer 2.16|2212219|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1364460-1364491, mismatch: 1, identity: 0.969

aaatttgaaagcgcaatggcagatgtaaaaaa	CRISPR spacer
aaatttgaaagtgcaatggcagatgtaaaaaa	Protospacer
***********.********************

17. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 854534-854565, mismatch: 1, identity: 0.969

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

18. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1373070-1373101, mismatch: 1, identity: 0.969

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

19. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 1700975-1701006, mismatch: 1, identity: 0.969

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

20. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to position: 2061993-2062024, mismatch: 1, identity: 0.969

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

21. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 1701123-1701154, mismatch: 1, identity: 0.969

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgatatggtgaaggtgacggataa	Protospacer
***********.********************

22. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to position: 2062141-2062172, mismatch: 1, identity: 0.969

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgatatggtgaaggtgacggataa	Protospacer
***********.********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	NC_008193	Pasteurella phage F108, complete genome	10933-10964	0	1.0
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	DQ114220	Bacteriophage F108, complete genome	10933-10964	0	1.0
NZ_CP015567_2	2.16\|2212219\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212219-2212250	32	MH238466	Pasteurella phage AFS-2018a, complete genome	23283-23314	0	1.0
NZ_CP015567_2	2.18\|2212339\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212339-2212370	32	NC_008193	Pasteurella phage F108, complete genome	14738-14769	0	1.0
NZ_CP015567_2	2.18\|2212339\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212339-2212370	32	DQ114220	Bacteriophage F108, complete genome	14738-14769	0	1.0
NZ_CP015567_2	2.21\|2212520\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212520-2212551	32	NC_008193	Pasteurella phage F108, complete genome	5541-5572	0	1.0
NZ_CP015567_2	2.21\|2212520\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212520-2212551	32	DQ114220	Bacteriophage F108, complete genome	5541-5572	0	1.0
NZ_CP015567_2	2.23\|2212640\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212640-2212671	32	NC_008193	Pasteurella phage F108, complete genome	7078-7109	0	1.0
NZ_CP015567_2	2.23\|2212640\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212640-2212671	32	DQ114220	Bacteriophage F108, complete genome	7078-7109	0	1.0
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	NC_008193	Pasteurella phage F108, complete genome	340-371	0	1.0
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	DQ114220	Bacteriophage F108, complete genome	340-371	0	1.0
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	MH238467	Pasteurella phage Pm86, complete genome	48686-48717	0	1.0
NZ_CP015567_2	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	32069-32100	0	1.0
NZ_CP015567_2	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	NC_047831	Pasteurella phage PHB02, complete genome	5373-5404	0	1.0
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	31906-31937	0	1.0
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	NC_047831	Pasteurella phage PHB02, complete genome	5536-5567	0	1.0
NZ_CP015567_2	2.34\|2213301\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213301-2213332	32	MH238466	Pasteurella phage AFS-2018a, complete genome	26022-26053	0	1.0
NZ_CP015567_2	2.36\|2213421\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213421-2213452	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	737-768	0	1.0
NZ_CP015567_2	2.38\|2213541\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213541-2213572	32	NC_047831	Pasteurella phage PHB02, complete genome	36864-36895	0	1.0
NZ_CP015567_2	2.40\|2213661\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213661-2213692	32	NC_047831	Pasteurella phage PHB02, complete genome	34883-34914	0	1.0
NZ_CP015567_2	2.41\|2213721\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213721-2213752	32	NC_047831	Pasteurella phage PHB02, complete genome	37627-37658	0	1.0
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	32470-32501	0	1.0
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	NC_047831	Pasteurella phage PHB02, complete genome	4972-5003	0	1.0
NZ_CP015567_2	2.1\|2211319\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2211319-2211350	32	MH238467	Pasteurella phage Pm86, complete genome	42601-42632	1	0.969
NZ_CP015567_2	2.4\|2211499\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211499-2211530	32	MH238466	Pasteurella phage AFS-2018a, complete genome	23770-23801	1	0.969
NZ_CP015567_2	2.19\|2212399\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212399-2212430	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	32566-32597	1	0.969
NZ_CP015567_2	2.22\|2212580\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212580-2212611	32	NC_008193	Pasteurella phage F108, complete genome	3509-3540	1	0.969
NZ_CP015567_2	2.22\|2212580\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212580-2212611	32	DQ114220	Bacteriophage F108, complete genome	3509-3540	1	0.969
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	32618-32649	1	0.969
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NC_047831	Pasteurella phage PHB02, complete genome	4824-4855	1	0.969
NZ_CP015567_2	2.31\|2213121\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213121-2213152	32	MH238467	Pasteurella phage Pm86, complete genome	5774-5805	1	0.969
NZ_CP015567_2	2.37\|2213481\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213481-2213512	32	NC_047831	Pasteurella phage PHB02, complete genome	37460-37491	1	0.969
NZ_CP015567_2	2.39\|2213601\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213601-2213632	32	NC_047831	Pasteurella phage PHB02, complete genome	34631-34662	1	0.969
NZ_CP015567_2	2.42\|2213781\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213781-2213812	32	NC_047831	Pasteurella phage PHB02, complete genome	36599-36630	1	0.969
NZ_CP015567_2	2.3\|2211439\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211439-2211470	32	NC_008193	Pasteurella phage F108, complete genome	11445-11476	2	0.938
NZ_CP015567_2	2.3\|2211439\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211439-2211470	32	DQ114220	Bacteriophage F108, complete genome	11445-11476	2	0.938
NZ_CP015567_2	2.19\|2212399\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212399-2212430	32	NC_047831	Pasteurella phage PHB02, complete genome	4876-4907	2	0.938
NZ_CP015567_2	2.30\|2213060\|33\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213060-2213092	33	NC_008193	Pasteurella phage F108, complete genome	4324-4356	2	0.939
NZ_CP015567_2	2.30\|2213060\|33\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213060-2213092	33	DQ114220	Bacteriophage F108, complete genome	4324-4356	2	0.939
NZ_CP015567_2	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	33396-33427	2	0.938
NZ_CP015567_2	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	NC_047831	Pasteurella phage PHB02, complete genome	4046-4077	2	0.938
NZ_CP015567_2	2.33\|2213241\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213241-2213272	32	MH238467	Pasteurella phage Pm86, complete genome	48883-48914	3	0.906
NZ_CP015567_2	2.35\|2213361\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213361-2213392	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	9448-9479	3	0.906
NZ_CP015567_2	2.35\|2213361\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213361-2213392	32	NC_047831	Pasteurella phage PHB02, complete genome	27997-28028	3	0.906
NZ_CP015567_2	2.35\|2213361\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213361-2213392	32	NC_047832	Pasteurella phage PHB01, complete genome	9634-9665	3	0.906
NZ_CP015567_2	2.37\|2213481\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213481-2213512	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	837-868	3	0.906
NZ_CP015567_2	2.39\|2213601\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213601-2213632	32	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	2841-2872	3	0.906
NZ_CP015567_1	1.4\|888098\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888098-888129	32	NZ_CP017756	Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence	73488-73519	5	0.844
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MH155876	Mycobacterium phage Priamo, complete genome	21829-21860	6	0.812
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MN586039	Mycobacterium phage Blinn1, complete genome	21852-21883	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_KX086582	Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence	25794-25825	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_KF831355	Staphylococcus aureus strain A960649 plasmid pBU108a, complete sequence	23170-23201	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_AP018563	Staphylococcus argenteus strain 58113 plasmid p1, complete sequence	18411-18442	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NC_013327	Staphylococcus aureus plasmid pWBG749, complete sequence	26168-26199	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	CP030569	Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence	12940-12971	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	CP030458	Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence	15652-15683	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_AP017923	Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence	17835-17866	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NC_013325	Staphylococcus aureus plasmid pWBG745, complete sequence	13088-13119	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	CP030696	Staphylococcus aureus strain ER01532.3 plasmid unnamed1, complete sequence	28191-28222	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	CP030710	Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence	7547-7578	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_CP012757	Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence	37721-37752	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_CP042004	Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence	11471-11502	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_CP047857	Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence	26882-26913	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_CP012594	Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence	9160-9191	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_MH587575	Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence	17922-17953	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	NZ_MH587574	Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence	17842-17873	6	0.812
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	CP030603	Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence	34556-34587	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP031319	Lactobacillus plantarum strain DR7 plasmid unnamed1, complete sequence	9722-9753	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP014913	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence	32820-32851	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP021460	Lactobacillus brevis strain ZLB004 plasmid p4, complete sequence	17465-17496	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP029350	Lactobacillus plantarum strain HAC01 plasmid pLP-HAC01, complete sequence	18026-18057	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP035016	Lactobacillus plantarum strain 12_3 plasmid pldD, complete sequence	26321-26352	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_AP014681	Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-1, complete sequence	15916-15947	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP032467	Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence	26279-26310	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP047123	Lactobacillus hilgardii strain FLUB plasmid unnamed2	9301-9332	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP032465	Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence	26485-26516	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP018179	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence	17442-17473	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP031179	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_E, complete sequence	8218-8249	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP046664	Lactobacillus plantarum strain 83-18 plasmid p83-18.4, complete sequence	8781-8812	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP019723	Lactobacillus plantarum strain CLP0611 plasmid pUnnamed, complete sequence	14718-14749	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP053913	Lactobacillus plantarum subsp. plantarum strain G1 plasmid p1, complete sequence	22096-22127	6	0.812
NZ_CP015567_2	2.27\|2212880\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212880-2212911	32	NZ_CP018182	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence	15246-15277	6	0.812
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	KU985096	Mycobacterium phage Kazan, complete genome	21792-21823	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MK359352	Mycobacterium phage JewelBug, complete genome	21791-21822	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MK494090	Mycobacterium phage Jordennis, complete genome	21776-21807	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	KX641261	Mycobacterium phage Isiphiwo, complete genome	21857-21888	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	KU695582	Mycobacterium phage McFly, complete genome	21786-21817	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MT024861	Mycobacterium phage Pmask, complete genome	21780-21811	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MH051253	Mycobacterium phage GreedyLawyer, complete genome	21786-21817	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MT657338	Mycobacterium phage SuperCallie99, complete genome	21778-21809	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	JF937092	Mycobacterium phage DaVinci, complete genome	21787-21818	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MH020240	Mycobacterium phage SuperAwesome, complete genome	21779-21810	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	MK894433	Mycobacterium phage Kipper29, complete genome	21786-21817	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	JN049605	Mycobacterium virus EricB, complete genome	21779-21810	7	0.781
NZ_CP015567_1	1.2\|887978\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887978-888009	32	NC_029077	Mycobacterium phage VohminGhazi, complete genome	21786-21817	7	0.781
NZ_CP015567_1	1.5\|888158\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888158-888189	32	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	465830-465861	7	0.781
NZ_CP015567_1	1.5\|888158\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888158-888189	32	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	650120-650151	7	0.781
NZ_CP015567_1	1.5\|888158\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888158-888189	32	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	1110688-1110719	7	0.781
NZ_CP015567_2	2.7\|2211679\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211679-2211710	32	MH791412	UNVERIFIED: Salmonella phage SeSz-2, complete genome	20606-20637	7	0.781
NZ_CP015567_2	2.9\|2211799\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211799-2211830	32	MN693268	Marine virus AFVG_25M194, complete genome	17075-17106	7	0.781
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP043609	Bacteroides fragilis strain GUT04 plasmid unnamed1, complete sequence	87897-87928	7	0.781
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP036547	Bacteroides fragilis strain DCMSKEJBY0001B plasmid pBFS01_1, complete sequence	35659-35690	7	0.781
NZ_CP015567_2	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	NZ_CP036540	Bacteroides fragilis strain DCMOUH0017B plasmid pBFO17_1, complete sequence	47273-47304	7	0.781
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	NZ_CP044019	Acinetobacter indicus strain HY20 plasmid pAI01, complete sequence	84481-84512	7	0.781
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	MN693741	Marine virus AFVG_250M995, complete genome	21374-21405	7	0.781
NZ_CP015567_2	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	MN693964	Marine virus AFVG_250M147, complete genome	20683-20714	7	0.781
NZ_CP015567_1	1.1\|887918\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887918-887949	32	NZ_MF770238	Aeromonas sobria strain JF2635 plasmid pJF2635-1, complete sequence	1753-1784	8	0.75
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	MN694758	Marine virus AFVG_250M853, complete genome	27038-27069	8	0.75
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	MN694774	Marine virus AFVG_250M941, complete genome	26488-26519	8	0.75
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	MN694077	Marine virus AFVG_250M852, complete genome	27041-27072	8	0.75
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	MN693487	Marine virus AFVG_25M100, complete genome	6473-6504	8	0.75
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	MN694586	Marine virus AFVG_250M370, complete genome	8206-8237	8	0.75
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	MK905543	Vibrio phage USC-1, complete genome	55483-55514	8	0.75
NZ_CP015567_2	2.2\|2211379\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211379-2211410	32	MK358448	Vibrio phage 5, complete genome	209261-209292	8	0.75
NZ_CP015567_2	2.13\|2212039\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212039-2212070	32	NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	99207-99238	8	0.75
NZ_CP015567_2	2.14\|2212099\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212099-2212130	32	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	110309-110340	8	0.75
NZ_CP015567_2	2.14\|2212099\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212099-2212130	32	MK774614	Aeromonas phage CF8, complete genome	95353-95384	8	0.75
NZ_CP015567_2	2.14\|2212099\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212099-2212130	32	AP014365	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C61, * SEQUENCING IN PROGRESS *	31124-31155	8	0.75
NZ_CP015567_2	2.23\|2212640\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212640-2212671	32	NC_009339	Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence	307102-307133	8	0.75
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	MH319741	Marine virus AG-345-E15 Ga0172270_11 genomic sequence	24529-24560	8	0.75
NZ_CP015567_2	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	MN855709	Bacteriophage sp. isolate 301, complete genome	6371-6402	8	0.75
NZ_CP015567_2	2.36\|2213421\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213421-2213452	32	NZ_KX426229	Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.1, complete sequence	115697-115728	8	0.75
NZ_CP015567_2	2.36\|2213421\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213421-2213452	32	CP019144	Acinetobacter lwoffii strain ZS207 plasmid pmZS, complete sequence	30959-30990	8	0.75
NZ_CP015567_2	2.36\|2213421\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213421-2213452	32	NZ_CP046295	Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence	177345-177376	8	0.75
NZ_CP015567_2	2.36\|2213421\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213421-2213452	32	NZ_CP032290	Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.6, complete sequence	10612-10643	8	0.75
NZ_CP015567_2	2.41\|2213721\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213721-2213752	32	NZ_AP017296	Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence	36203-36234	8	0.75
NZ_CP015567_2	2.41\|2213721\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213721-2213752	32	MN693440	Marine virus AFVG_25M540, complete genome	19656-19687	8	0.75
NZ_CP015567_1	1.9\|888398\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888398-888429	32	LN846932	Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome	1949-1980	9	0.719
NZ_CP015567_2	2.9\|2211799\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211799-2211830	32	NZ_CP031836	Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence	52247-52278	9	0.719
NZ_CP015567_2	2.9\|2211799\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211799-2211830	32	NZ_CP031836	Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence	127333-127364	9	0.719
NZ_CP015567_2	2.9\|2211799\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211799-2211830	32	NZ_CP020458	Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence	49565-49596	9	0.719
NZ_CP015567_2	2.9\|2211799\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211799-2211830	32	NZ_CP020458	Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence	129238-129269	9	0.719
NZ_CP015567_2	2.13\|2212039\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212039-2212070	32	NZ_CP045421	Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence	12293-12324	9	0.719
NZ_CP015567_2	2.21\|2212520\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212520-2212551	32	NZ_CP047287	Proteus cibarius strain G11 plasmid p52, complete sequence	24398-24429	9	0.719
NZ_CP015567_2	2.21\|2212520\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212520-2212551	32	NZ_CP053373	Proteus cibarius strain G32 plasmid pG32-51, complete sequence	20709-20740	9	0.719
NZ_CP015567_2	2.21\|2212520\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212520-2212551	32	NZ_CP047341	Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence	12442-12473	9	0.719
NZ_CP015567_2	2.21\|2212520\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212520-2212551	32	NZ_CP045009	Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence	29772-29803	9	0.719
NZ_CP015567_2	2.31\|2213121\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213121-2213152	32	JQ659259	Leuconostoc phage Lmd1, complete genome	3933-3964	9	0.719
NZ_CP015567_2	2.34\|2213301\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213301-2213332	32	NC_012854	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence	76973-77004	9	0.719
NZ_CP015567_2	2.41\|2213721\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213721-2213752	32	NC_047702	Uncultured phage_MedDCM-OCT-S35-C6 DNA, complete genome, group G8, isolate: uvMED-CGR-U-MedDCM-OCT-S35-C6	31877-31908	9	0.719
NZ_CP015567_2	2.43\|2213841\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213841-2213872	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	556966-556997	9	0.719
NZ_CP015567_1	1.1\|887918\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887918-887949	32	NZ_CP009919	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_1, complete sequence	31214-31245	10	0.688
NZ_CP015567_1	1.1\|887918\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	887918-887949	32	NZ_CP035096	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed2, complete sequence	3106-3137	10	0.688
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	5680-5711	10	0.688
NZ_CP015567_1	1.3\|888038\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888038-888069	32	GU943040	Uncultured phage MedDCM-OCT-S09-C28 genomic sequence	16896-16927	10	0.688
NZ_CP015567_1	1.4\|888098\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888098-888129	32	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	284092-284123	10	0.688
NZ_CP015567_1	1.10\|888458\|32\|NZ_CP015567\|PILER-CR,CRISPRCasFinder,CRT	888458-888489	32	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	505837-505868	10	0.688
NZ_CP015567_2	2.8\|2211739\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2211739-2211770	32	NZ_CP040760	Paracoccus sp. 2251 plasmid unnamed6, complete sequence	103333-103364	10	0.688
NZ_CP015567_2	2.15\|2212159\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212159-2212190	32	NC_048827	Vibrio phage vB_VchM_Kuja, complete genome	123274-123305	10	0.688
NZ_CP015567_2	2.19\|2212399\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212399-2212430	32	NZ_CP049041	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_4, complete sequence	31754-31785	10	0.688
NZ_CP015567_2	2.22\|2212580\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212580-2212611	32	NZ_CP039900	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence	127160-127191	10	0.688
NZ_CP015567_2	2.22\|2212580\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212580-2212611	32	NZ_CP039891	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence	127160-127191	10	0.688
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	KX190834	Bacillus phage BMBtpLA3, complete genome	34959-34990	10	0.688
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	NC_011645	Bacillus phage TP21-L, complete genome	17896-17927	10	0.688
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	KF296717	Bacillus phage proCM3, complete genome	36281-36312	10	0.688
NZ_CP015567_2	2.24\|2212700\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212700-2212731	32	JX887877	Bacillus phage vB_BtS_BMBtp2, complete genome	4882-4913	10	0.688
NZ_CP015567_2	2.39\|2213601\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213601-2213632	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	101049-101080	10	0.688

1. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 0, identity: 1.0

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
aaacggtcgtgcgtcgttcgggttgtgatctt	Protospacer
********************************

2. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 0, identity: 1.0

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
aaacggtcgtgcgtcgttcgggttgtgatctt	Protospacer
********************************

3. spacer 2.16|2212219|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0

aaatttgaaagcgcaatggcagatgtaaaaaa	CRISPR spacer
aaatttgaaagcgcaatggcagatgtaaaaaa	Protospacer
********************************

4. spacer 2.18|2212339|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 0, identity: 1.0

ttaactgggcgaataaaacagcaagtgcgggt	CRISPR spacer
ttaactgggcgaataaaacagcaagtgcgggt	Protospacer
********************************

5. spacer 2.18|2212339|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 0, identity: 1.0

ttaactgggcgaataaaacagcaagtgcgggt	CRISPR spacer
ttaactgggcgaataaaacagcaagtgcgggt	Protospacer
********************************

6. spacer 2.21|2212520|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 0, identity: 1.0

ttccgcaaactgtatttaaaaacatatcgatc	CRISPR spacer
ttccgcaaactgtatttaaaaacatatcgatc	Protospacer
********************************

7. spacer 2.21|2212520|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 0, identity: 1.0

ttccgcaaactgtatttaaaaacatatcgatc	CRISPR spacer
ttccgcaaactgtatttaaaaacatatcgatc	Protospacer
********************************

8. spacer 2.23|2212640|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 0, identity: 1.0

gatttcatcttccgcttgacccgttactaaac	CRISPR spacer
gatttcatcttccgcttgacccgttactaaac	Protospacer
********************************

9. spacer 2.23|2212640|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 0, identity: 1.0

gatttcatcttccgcttgacccgttactaaac	CRISPR spacer
gatttcatcttccgcttgacccgttactaaac	Protospacer
********************************

10. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 0, identity: 1.0

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
atatgatattttttcaaagataaacggaaaga	Protospacer
********************************

11. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 0, identity: 1.0

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
atatgatattttttcaaagataaacggaaaga	Protospacer
********************************

12. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 0, identity: 1.0

gttgagaaaaatcaaaataccgggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaataccgggttttcaaa	Protospacer
********************************

13. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 0, identity: 1.0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

14. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 0, identity: 1.0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

15. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 0, identity: 1.0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

16. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 0, identity: 1.0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

17. spacer 2.34|2213301|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0

atggtgcactgggtagcttcggtgagctaaca	CRISPR spacer
atggtgcactgggtagcttcggtgagctaaca	Protospacer
********************************

18. spacer 2.36|2213421|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 0, identity: 1.0

taaataatcaactaattaacagtagaggatat	CRISPR spacer
taaataatcaactaattaacagtagaggatat	Protospacer
********************************

19. spacer 2.38|2213541|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 0, identity: 1.0

ttagatttaccacattatagcggtgaggatat	CRISPR spacer
ttagatttaccacattatagcggtgaggatat	Protospacer
********************************

20. spacer 2.40|2213661|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 0, identity: 1.0

tatgcctatggttatccctcctcgcgcttgga	CRISPR spacer
tatgcctatggttatccctcctcgcgcttgga	Protospacer
********************************

21. spacer 2.41|2213721|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 0, identity: 1.0

ccgaccaagcccaatgaaaaacaatatataga	CRISPR spacer
ccgaccaagcccaatgaaaaacaatatataga	Protospacer
********************************

22. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 0, identity: 1.0

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgacatggtgaaggtgacggataa	Protospacer
********************************

23. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 0, identity: 1.0

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgacatggtgaaggtgacggataa	Protospacer
********************************

24. spacer 2.1|2211319|32|NZ_CP015567|CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.969

accaatctgataatcgagccaagatcgcttta	CRISPR spacer
accaatctgataatcgagccaaaatcgcttta	Protospacer
**********************.*********

25. spacer 2.4|2211499|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 1, identity: 0.969

gtatgagttcggcatttgcagagcttaaagct	CRISPR spacer
gcatgagttcggcatttgcagagcttaaagct	Protospacer
*.******************************

26. spacer 2.19|2212399|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 1, identity: 0.969

accgttgagacaaaagatgtcgtttgtgacaa	CRISPR spacer
agcgttgagacaaaagatgtcgtttgtgacaa	Protospacer
* ******************************

27. spacer 2.22|2212580|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 1, identity: 0.969

ctttctctttcggcgattttctcggcaagatt	CRISPR spacer
ctttctctttcggcgactttctcggcaagatt	Protospacer
****************.***************

28. spacer 2.22|2212580|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 1, identity: 0.969

ctttctctttcggcgattttctcggcaagatt	CRISPR spacer
ctttctctttcggcgactttctcggcaagatt	Protospacer
****************.***************

29. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 1, identity: 0.969

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

30. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 1, identity: 0.969

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

31. spacer 2.31|2213121|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.969

tttaacaatgttatgcgttttgtaggggtaat	CRISPR spacer
tttaacaatgttatgcgttttgtaggagtaat	Protospacer
**************************.*****

32. spacer 2.37|2213481|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 1, identity: 0.969

aatccgcaggatatttgggtatttcccgtagt	CRISPR spacer
aatccgcaggatatttgggtatttcccgtagc	Protospacer
*******************************.

33. spacer 2.39|2213601|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 1, identity: 0.969

gtttttcaggtggttccccaaggtgagctgtt	CRISPR spacer
gtttttcaggtggttccccaaggtgagccgtt	Protospacer
****************************.***

34. spacer 2.42|2213781|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 1, identity: 0.969

tcagagctatgctgtttgtaactacggacgaa	CRISPR spacer
tcagagctatgctgtctgtaactacggacgaa	Protospacer
***************.****************

35. spacer 2.3|2211439|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 2, identity: 0.938

agtgtaattccgctccgttgcttaaaataatc	CRISPR spacer
agtgtaattccgcgccattgcttaaaataatc	Protospacer
************* **.***************

36. spacer 2.3|2211439|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 2, identity: 0.938

agtgtaattccgctccgttgcttaaaataatc	CRISPR spacer
agtgtaattccgcgccattgcttaaaataatc	Protospacer
************* **.***************

37. spacer 2.19|2212399|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 2, identity: 0.938

accgttgagacaaaagatgtcgtttgtgacaa	CRISPR spacer
agcgttgagacaaaagatgtcgtctgtgacaa	Protospacer
* *********************.********

38. spacer 2.30|2213060|33|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 2, identity: 0.939

tgaaatctcttaaatacttcggtttttttcctg	CRISPR spacer
taaaatctcttaaatacttcggttgttttcctg	Protospacer
*.********************** ********

39. spacer 2.30|2213060|33|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 2, identity: 0.939

tgaaatctcttaaatacttcggtttttttcctg	CRISPR spacer
taaaatctcttaaatacttcggttgttttcctg	Protospacer
*.********************** ********

40. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 2, identity: 0.938

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccatcctaagatccgac	Protospacer
*****************.******* ******

41. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 2, identity: 0.938

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccatcctaagatccgac	Protospacer
*****************.******* ******

42. spacer 2.33|2213241|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 3, identity: 0.906

taaaattataactgtcgtcgctggcttgtagt	CRISPR spacer
taaaattaaaactgtcgtcgctagcttgtagc	Protospacer
******** *************.********.

43. spacer 2.35|2213361|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 3, identity: 0.906

cttctgtgatacgagtgtccctgattggtcgc	CRISPR spacer
cttctgtgatacaagtgttcctgattggtcac	Protospacer
************.*****.***********.*

44. spacer 2.35|2213361|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 3, identity: 0.906

cttctgtgatacgagtgtccctgattggtcgc	CRISPR spacer
cttctgtgatacaagtgttcctgattggtcac	Protospacer
************.*****.***********.*

45. spacer 2.35|2213361|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047832 (Pasteurella phage PHB01, complete genome) position: , mismatch: 3, identity: 0.906

cttctgtgatacgagtgtccctgattggtcgc	CRISPR spacer
cttctgtgatacaagtgttcctgattggtcac	Protospacer
************.*****.***********.*

46. spacer 2.37|2213481|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 3, identity: 0.906

aatccgcaggatatttgggtatttcccgtagt	CRISPR spacer
aatccgtaagatatttgggtatttcccgtagc	Protospacer
******.*.**********************.

47. spacer 2.39|2213601|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 3, identity: 0.906

gtttttcaggtggttccccaaggtgagctgtt	CRISPR spacer
gcttttctggtggttccccaaggtgagccgtt	Protospacer
*.***** ********************.***

48. spacer 1.4|888098|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017756 (Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

attcgatttccagtgccgaaaat-ccatgccct	CRISPR spacer
attcgatttctggtgccgaaaatggcttgccc-	Protospacer
**********..***********  * *****

49. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MH155876 (Mycobacterium phage Priamo, complete genome) position: , mismatch: 6, identity: 0.812

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
atgctgccgtgggtcgttcgggttgtgatcgt	Protospacer
* .* *.**** ****************** *

50. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MN586039 (Mycobacterium phage Blinn1, complete genome) position: , mismatch: 6, identity: 0.812

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
atgctgccgtgggtcgttcgggttgtgatcgt	Protospacer
* .* *.**** ****************** *

51. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX086582 (Staphylococcus aureus strain WBG1024 plasmid pWBG637, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

52. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KF831355 (Staphylococcus aureus strain A960649 plasmid pBU108a, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

53. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018563 (Staphylococcus argenteus strain 58113 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

54. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_013327 (Staphylococcus aureus plasmid pWBG749, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

55. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to CP030569 (Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

56. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to CP030458 (Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

57. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017923 (Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

58. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_013325 (Staphylococcus aureus plasmid pWBG745, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

59. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to CP030696 (Staphylococcus aureus strain ER01532.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

60. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to CP030710 (Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

61. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012757 (Staphylococcus aureus subsp. aureus strain JS395 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

62. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042004 (Staphylococcus aureus strain B3-14B plasmid pSALNT46, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

63. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047857 (Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

64. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012594 (Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

65. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH587575 (Staphylococcus aureus strain WBG4880 plasmid pWBG637, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

66. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH587574 (Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

67. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to CP030603 (Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
taacggtag-aaacagaagaatttgaatatgac	Protospacer
 ** .*.** ************* *** *****

68. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031319 (Lactobacillus plantarum strain DR7 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

69. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014913 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

70. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021460 (Lactobacillus brevis strain ZLB004 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

71. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029350 (Lactobacillus plantarum strain HAC01 plasmid pLP-HAC01, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

72. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035016 (Lactobacillus plantarum strain 12_3 plasmid pldD, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

73. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014681 (Lactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid pLOOC260-1, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

74. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032467 (Lactobacillus plantarum strain ATG-K8 plasmid pK8, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

75. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047123 (Lactobacillus hilgardii strain FLUB plasmid unnamed2) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

76. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032465 (Lactobacillus plantarum strain ATG-K6 plasmid pK6, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

77. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018179 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

78. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031179 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_E, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

79. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046664 (Lactobacillus plantarum strain 83-18 plasmid p83-18.4, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

80. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019723 (Lactobacillus plantarum strain CLP0611 plasmid pUnnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

81. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053913 (Lactobacillus plantarum subsp. plantarum strain G1 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

82. spacer 2.27|2212880|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018182 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence) position: , mismatch: 6, identity: 0.812

gttgagaaaaatcaaaataccg--ggttttcaaa	CRISPR spacer
gttgagaaaaatcaaaatgctggaggatatca--	Protospacer
******************.*.*  ** * ***

83. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to KU985096 (Mycobacterium phage Kazan, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

84. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MK359352 (Mycobacterium phage JewelBug, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

85. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MK494090 (Mycobacterium phage Jordennis, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

86. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to KX641261 (Mycobacterium phage Isiphiwo, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

87. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to KU695582 (Mycobacterium phage McFly, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

88. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MT024861 (Mycobacterium phage Pmask, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

89. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MH051253 (Mycobacterium phage GreedyLawyer, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

90. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MT657338 (Mycobacterium phage SuperCallie99, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

91. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to JF937092 (Mycobacterium phage DaVinci, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

92. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MH020240 (Mycobacterium phage SuperAwesome, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

93. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MK894433 (Mycobacterium phage Kipper29, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

94. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to JN049605 (Mycobacterium virus EricB, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

95. spacer 1.2|887978|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NC_029077 (Mycobacterium phage VohminGhazi, complete genome) position: , mismatch: 7, identity: 0.781

aaacggtcgtgcgtcgttcgggttgtgatctt	CRISPR spacer
gtgctgacgtgggtcgttcgggttgtgatcgt	Protospacer
. .* * **** ****************** *

96. spacer 1.5|888158|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgacgtgttcaactaacggctgacaatc	CRISPR spacer
tttctgacgtgttcaactatcggctgaacata	Protospacer
 *  *************** *******  **

97. spacer 1.5|888158|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgacgtgttcaactaacggctgacaatc	CRISPR spacer
tttctgacgtgttcaactatcggctgaacata	Protospacer
 *  *************** *******  **

98. spacer 1.5|888158|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 7, identity: 0.781

ataatgacgtgttcaactaacggctgacaatc	CRISPR spacer
tttctgacgtgttcaactatcggctgaacata	Protospacer
 *  *************** *******  **

99. spacer 2.7|2211679|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH791412 (UNVERIFIED: Salmonella phage SeSz-2, complete genome) position: , mismatch: 7, identity: 0.781

ggtgagtggcctgaggatgcgg-ataggtggga	CRISPR spacer
ggtgggtggcctgagggtgcggaatacgcaag-	Protospacer
****.***********.***** *** *...*

100. spacer 2.9|2211799|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MN693268 (Marine virus AFVG_25M194, complete genome) position: , mismatch: 7, identity: 0.781

gaagatgacaag-aatttaacttttgatcagct	CRISPR spacer
-tggataaaaaataatttgacttttgatcagct	Protospacer
  .***.* **. *****.**************

101. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043609 (Bacteroides fragilis strain GUT04 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tgaaatac---acaaccgatattgaaggggtaaat	CRISPR spacer
---attacggaacaacagatattgaagtggtaaaa	Protospacer
   * ***   ***** ********** ******

102. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036547 (Bacteroides fragilis strain DCMSKEJBY0001B plasmid pBFS01_1, complete sequence) position: , mismatch: 7, identity: 0.781

tgaaatac---acaaccgatattgaaggggtaaat	CRISPR spacer
---attacggaacaacagatattgaagtggtaaaa	Protospacer
   * ***   ***** ********** ******

103. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036540 (Bacteroides fragilis strain DCMOUH0017B plasmid pBFO17_1, complete sequence) position: , mismatch: 7, identity: 0.781

tgaaatac---acaaccgatattgaaggggtaaat	CRISPR spacer
---attacggaacaacagatattgaagtggtaaaa	Protospacer
   * ***   ***** ********** ******

104. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044019 (Acinetobacter indicus strain HY20 plasmid pAI01, complete sequence) position: , mismatch: 7, identity: 0.781

ctcacg-caatcgcacaacaattttattaattt	CRISPR spacer
-gcacgatgatcgaacaaaaattttattaattc	Protospacer
  **** ..**** **** *************.

105. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to MN693741 (Marine virus AFVG_250M995, complete genome) position: , mismatch: 7, identity: 0.781

gtgcattacgacatggtgaaggtg-acggataa	CRISPR spacer
aagcattacgacatgcggaaggtgaactcata-	Protospacer
. *************  ******* **  ***

106. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to MN693964 (Marine virus AFVG_250M147, complete genome) position: , mismatch: 7, identity: 0.781

gtgcattacgacatggtgaaggtg-acggataa	CRISPR spacer
aagcattacgacatgcggaaggtgaactcata-	Protospacer
. *************  ******* **  ***

107. spacer 1.1|887918|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF770238 (Aeromonas sobria strain JF2635 plasmid pJF2635-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttccgatttttgatagtcaaagactactgagt	CRISPR spacer
ctccacggcttgatactcaaagactacttagt	Protospacer
.***.   .****** ************ ***

108. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 8, identity: 0.75

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
aaaacactagaagatttaaaggtcgagggagg	Protospacer
.****************** ****.  *.*..

109. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MN694774 (Marine virus AFVG_250M941, complete genome) position: , mismatch: 8, identity: 0.75

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
aaaacactagaagatttaaaggtcgagggagg	Protospacer
.****************** ****.  *.*..

110. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 8, identity: 0.75

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
aaaacactagaagatttaaaggtcgagggagg	Protospacer
.****************** ****.  *.*..

111. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MN693487 (Marine virus AFVG_25M100, complete genome) position: , mismatch: 8, identity: 0.75

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
aaaacactagaagatttaaaggtcgagggagg	Protospacer
.****************** ****.  *.*..

112. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to MN694586 (Marine virus AFVG_250M370, complete genome) position: , mismatch: 8, identity: 0.75

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
aaaacactagaagatttaaaggtcgagggagg	Protospacer
.****************** ****.  *.*..

113. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MK905543 (Vibrio phage USC-1, complete genome) position: , mismatch: 8, identity: 0.75

aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
agtctgaggaaacagaagaattggaagacgat	Protospacer
*.    **.*******************.**.

114. spacer 2.2|2211379|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MK358448 (Vibrio phage 5, complete genome) position: , mismatch: 8, identity: 0.75

aagagcagaaaacagaagaattggaagatgac	CRISPR spacer
agtctgaggaaacagaagaattggaagacgat	Protospacer
*.    **.*******************.**.

115. spacer 2.13|2212039|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 8, identity: 0.75

gatcgccgctttcgtcttcgactgc--tgtcaaa	CRISPR spacer
gatcgccgccttcgccttcgactacatcgccc--	Protospacer
*********.****.********.*  .*.*

116. spacer 2.14|2212099|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 8, identity: 0.75

tccatctcttcttcgtaataaccgtttgttgc	CRISPR spacer
gtcacctcttcttcgttataaccgttcagcgc	Protospacer
 .**.*********** *********.. .**

117. spacer 2.14|2212099|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MK774614 (Aeromonas phage CF8, complete genome) position: , mismatch: 8, identity: 0.75

tccatctcttcttcgtaataaccgtttgttgc	CRISPR spacer
tccatcgcttcttggtaataaccggacatgtc	Protospacer
****** ****** **********  ..*  *

118. spacer 2.14|2212099|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to AP014365 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C61, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tccatctcttcttcgtaataaccgtttgttgc	CRISPR spacer
tccatctcttcttggtcataacccatagccac	Protospacer
************* ** ******  * *...*

119. spacer 2.23|2212640|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 8, identity: 0.75

gatttcatcttccgcttgacccgttactaaac-	CRISPR spacer
gacttcatcttccgcttgatccg-tgtcatgcg	Protospacer
**.****************.*** *...* .*

120. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 8, identity: 0.75

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
atatgatatcttatcaaagataattgcagatc	Protospacer
*********.** ********** .* *.*

121. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MN855709 (Bacteriophage sp. isolate 301, complete genome) position: , mismatch: 8, identity: 0.75

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctatctgtttcacacaacaatttttttaattt	Protospacer
**  *    **.************ *******

122. spacer 2.36|2213421|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX426229 (Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.1, complete sequence) position: , mismatch: 8, identity: 0.75

taaataatcaactaattaacagtagaggatat	CRISPR spacer
taaataatgagctaattaacagtacatattcg	Protospacer
******** *.************* * . *

123. spacer 2.36|2213421|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to CP019144 (Acinetobacter lwoffii strain ZS207 plasmid pmZS, complete sequence) position: , mismatch: 8, identity: 0.75

taaataatcaactaattaacagtagaggatat	CRISPR spacer
taaataatgagctaattaacagtacatattcg	Protospacer
******** *.************* * . *

124. spacer 2.36|2213421|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046295 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

taaataatcaactaattaacagtagaggatat	CRISPR spacer
taaataatgagctaattaacagtacatattcg	Protospacer
******** *.************* * . *

125. spacer 2.36|2213421|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032290 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.6, complete sequence) position: , mismatch: 8, identity: 0.75

taaataatcaactaattaacagtagaggatat	CRISPR spacer
taaataatgagctaattaacagtacatattcg	Protospacer
******** *.************* * . *

126. spacer 2.41|2213721|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017296 (Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence) position: , mismatch: 8, identity: 0.75

ccgaccaagcccaatgaaaaacaatatataga	CRISPR spacer
cagaccaagcccaatcaaaatcaataatctgg	Protospacer
* ************* **** *****  . *.

127. spacer 2.41|2213721|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to MN693440 (Marine virus AFVG_25M540, complete genome) position: , mismatch: 8, identity: 0.75

ccgaccaagcccaatgaaaaacaatatataga	CRISPR spacer
caaagtcagcccaatgagaaacaatatctaaa	Protospacer
* .* . **********.********* **.*

128. spacer 1.9|888398|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to LN846932 (Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome) position: , mismatch: 9, identity: 0.719

aagcccaccttgcgcttgaacagatgaattaa	CRISPR spacer
ttgctttccttgcgctttaacagatgtatttt	Protospacer
  **.. ********** ******** ***

129. spacer 2.9|2211799|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gaagatgacaagaatttaacttttgatcagct	CRISPR spacer
attggtgaaaagaatttaacttttaatctttt	Protospacer
.  *.*** ***************.***  .*

130. spacer 2.9|2211799|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gaagatgacaagaatttaacttttgatcagct	CRISPR spacer
gaagatgaaaacaatttaactttagcaggatt	Protospacer
******** ** *********** *   ...*

131. spacer 2.9|2211799|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 9, identity: 0.719

gaagatgacaagaatttaacttttgatcagct	CRISPR spacer
attggtgaaaagaatttaacttttaatctttt	Protospacer
.  *.*** ***************.***  .*

132. spacer 2.9|2211799|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 9, identity: 0.719

gaagatgacaagaatttaacttttgatcagct	CRISPR spacer
gaagatgaaaacaatttaactttagcaggatt	Protospacer
******** ** *********** *   ...*

133. spacer 2.13|2212039|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045421 (Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence) position: , mismatch: 9, identity: 0.719

gatcgccgctttcgtcttcgactgctgtcaaa	CRISPR spacer
cgtcgccgccttcgtcttcgactgcggctttg	Protospacer
 .*******.*************** *..  .

134. spacer 2.21|2212520|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047287 (Proteus cibarius strain G11 plasmid p52, complete sequence) position: , mismatch: 9, identity: 0.719

ttccgcaaactgtatttaaaaacatatcgatc	CRISPR spacer
cattcaaaactatattgaaaaacatatcgata	Protospacer
. ..  *****.**** **************

135. spacer 2.21|2212520|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053373 (Proteus cibarius strain G32 plasmid pG32-51, complete sequence) position: , mismatch: 9, identity: 0.719

ttccgcaaactgtatttaaaaacatatcgatc	CRISPR spacer
cattcaaaactatattgaaaaacatatcgata	Protospacer
. ..  *****.**** **************

136. spacer 2.21|2212520|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047341 (Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence) position: , mismatch: 9, identity: 0.719

ttccgcaaactgtatttaaaaacatatcgatc	CRISPR spacer
cattcaaaactatattgaaaaacatatcgata	Protospacer
. ..  *****.**** **************

137. spacer 2.21|2212520|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045009 (Proteus cibarius strain ZF2 plasmid pZF2-cfr, complete sequence) position: , mismatch: 9, identity: 0.719

ttccgcaaactgtatttaaaaacatatcgatc	CRISPR spacer
cattcaaaactatattgaaaaacatatcgata	Protospacer
. ..  *****.**** **************

138. spacer 2.31|2213121|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to JQ659259 (Leuconostoc phage Lmd1, complete genome) position: , mismatch: 9, identity: 0.719

tttaacaatgttatgcgttttgtaggggtaat	CRISPR spacer
attgacaatgttatgctttttgtaaacctttt	Protospacer
 **.************ *******..  *  *

139. spacer 2.34|2213301|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_012854 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgcactgggtagcttcggtgagctaaca	CRISPR spacer
ctggtgcgctggttagcttcggtgatcctctg	Protospacer
 ******.**** ************ *.  ..

140. spacer 2.41|2213721|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_047702 (Uncultured phage_MedDCM-OCT-S35-C6 DNA, complete genome, group G8, isolate: uvMED-CGR-U-MedDCM-OCT-S35-C6) position: , mismatch: 9, identity: 0.719

ccgaccaagcccaatgaaaaacaatatataga	CRISPR spacer
gaaaccaagccaaatgaaaaagaatatgacaa	Protospacer
  .******** ********* *****.  .*

141. spacer 2.43|2213841|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctgttgcaattatcaagcgcggcagtcat	CRISPR spacer
cgagaggggcaatcatcaagcgcggctgtcat	Protospacer
. .  *  *****.************ *****

142. spacer 1.1|887918|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009919 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_1, complete sequence) position: , mismatch: 10, identity: 0.688

ttccgatttttgatagtcaaagactactgagt	CRISPR spacer
gcttcatttttgatagtcatagacaactggaa	Protospacer
 ... ************** **** ****..

143. spacer 1.1|887918|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035096 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

ttccgatttttgatagtcaaagactactgagt	CRISPR spacer
gcttcatttttgatagtcatagacaactggaa	Protospacer
 ... ************** **** ****..

144. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 10, identity: 0.688

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
tcgcggcaagaagatttaaccgtcatcgaaat	Protospacer
  .  .* ************ *****.****

145. spacer 1.3|888038|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to GU943040 (Uncultured phage MedDCM-OCT-S09-C28 genomic sequence) position: , mismatch: 10, identity: 0.688

gaaacactagaagatttaacggtcattgaaaa	CRISPR spacer
gaaacactagaacttttaacggttcaggcggt	Protospacer
************  *********.   * ..

146. spacer 1.4|888098|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

attcgatttccagtgccgaaaatccatgccct	CRISPR spacer
gctgctgttccagccccgaaaatccatgccga	Protospacer
..*    ******. ***************

147. spacer 1.10|888458|32|NZ_CP015567|PILER-CR,CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tttaagctacgtttatccgcaagattcactac	CRISPR spacer
acaaagccacggttatccgcaagattgtagag	Protospacer
 . ****.*** **************    *

148. spacer 2.8|2211739|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040760 (Paracoccus sp. 2251 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.688

gtttagaactgccagattcaggtgcctcattc	CRISPR spacer
agaccggaccgccagattcaggtgccttatag	Protospacer
.  . *.**.*****************.**

149. spacer 2.15|2212159|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_048827 (Vibrio phage vB_VchM_Kuja, complete genome) position: , mismatch: 10, identity: 0.688

tgcggtcgttttttaacgaaattcgcggaagt	CRISPR spacer
ggcggtctttttttaactaaattcatatacaa	Protospacer
 ****** ********* ******... * .

150. spacer 2.19|2212399|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049041 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_4, complete sequence) position: , mismatch: 10, identity: 0.688

accgttgagacaaaagatgtcgtttgtgacaa	CRISPR spacer
atgattgtgacaaaagaagtcgtttgttttcg	Protospacer
*. .*** ********* *********  . .

151. spacer 2.22|2212580|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039900 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877b, complete sequence) position: , mismatch: 10, identity: 0.688

ctttctctttcggcgattttctcggcaagatt	CRISPR spacer
agaagccgttcggcgattttgtcagcaagatc	Protospacer
     .* ************ **.*******.

152. spacer 2.22|2212580|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039891 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499b, complete sequence) position: , mismatch: 10, identity: 0.688

ctttctctttcggcgattttctcggcaagatt	CRISPR spacer
agaagccgttcggcgattttgtcagcaagatc	Protospacer
     .* ************ **.*******.

153. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to KX190834 (Bacillus phage BMBtpLA3, complete genome) position: , mismatch: 10, identity: 0.688

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
gaatgatattatttcaaagatcaacatgtcta	Protospacer
. ******** ********** ***. .   *

154. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NC_011645 (Bacillus phage TP21-L, complete genome) position: , mismatch: 10, identity: 0.688

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
gaatgatattatttcaaagatcaacatgtcta	Protospacer
. ******** ********** ***. .   *

155. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to KF296717 (Bacillus phage proCM3, complete genome) position: , mismatch: 10, identity: 0.688

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
gaatgatattatttcaaagatcaacatgtcta	Protospacer
. ******** ********** ***. .   *

156. spacer 2.24|2212700|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to JX887877 (Bacillus phage vB_BtS_BMBtp2, complete genome) position: , mismatch: 10, identity: 0.688

atatgatattttttcaaagataaacggaaaga	CRISPR spacer
gaatgatattatttcaaagatcaacatgtcta	Protospacer
. ******** ********** ***. .   *

157. spacer 2.39|2213601|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gtttttcaggtggttccccaaggtgagctgtt	CRISPR spacer
gccaatcaggtggttccggaaggtgagcgtca	Protospacer
*..  ************  *********  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

796545 : 897710

Mannheimia_phage(40.0%)

capsid,portal,integrase,head,tail,tRNA,plate,terminase

attL 820428:820445|attR 877960:877977

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014325804.1\|796545_797925_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	2.5e-44	34.6
WP_005717092.1\|798061_798571_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_014325805.1\|798619_799171_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_005751698.1\|799277_800069_+	TatD family hydrolase	NA	NA	NA	NA
WP_005722869.1\|800107_800350_+	hypothetical protein	NA	NA	NA	NA
WP_010906934.1\|800374_800851_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	H6WXC9	Vibrio_phage	2.5e-52	61.7
WP_014325807.1\|800922_803064_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	2.2e-257	62.1
WP_005722865.1\|803366_804773_-	c-type cytochrome	NA	NA	NA	NA
WP_014325808.1\|804962_806261_-	adenylosuccinate synthase	W5S5V7	Pithovirus	1.1e-70	36.5
WP_005751694.1\|806440_807793_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_016504366.1\|807927_809190_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.9e-95	47.3
WP_005717062.1\|809203_809884_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_016504367.1\|810015_810831_+	hypothetical protein	NA	NA	NA	NA
WP_005754391.1\|810915_812304_-	anaerobic C4-dicarboxylate transporter DcuC	NA	NA	NA	NA
WP_014325811.1\|812297_813437_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_005722854.1\|813718_814210_-	hypothetical protein	NA	NA	NA	NA
WP_005717048.1\|814345_815347_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.9e-73	44.5
WP_014325812.1\|815492_816866_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_016504673.1\|817334_818432_+	murein transglycosylase A	NA	NA	NA	NA
WP_014325814.1\|818431_819193_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	2.0e-14	32.2
WP_014325815.1\|819339_820428_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
820428:820445	attL	NA	NA	NA	NA
WP_014325816.1\|820492_822313_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	2.5e-47	25.7
WP_005717037.1\|822565_822697_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_014325817.1\|822875_823880_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_014325818.1\|824127_824520_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_014325819.1\|824617_825244_+	guanylate kinase	A0A223FN12	Murmansk_poxvirus	3.8e-16	32.4
WP_005717016.1\|825310_825580_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_005722820.1\|825640_827764_+	bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	2.6e-11	38.9
WP_005751676.1\|827760_829842_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_005757018.1\|829834_830347_+	chorismate lyase	NA	NA	NA	NA
WP_014325820.1\|830343_831153_+	glutamate racemase	NA	NA	NA	NA
WP_005751354.1\|836992_837256_-	hypothetical protein	NA	NA	NA	NA
WP_071523696.1\|838396_839392_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	1.6e-120	63.9
WP_071523695.1\|839404_841198_-\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	1.4e-223	65.9
WP_071523694.1\|841347_842199_+\|capsid	GPO family capsid scaffolding protein	Q19UT4	Mannheimia_phage	7.7e-68	51.8
WP_071523693.1\|842214_843261_+\|capsid	phage major capsid protein, P2 family	A0A0M3LPD2	Mannheimia_phage	6.5e-101	56.6
WP_071523692.1\|843264_843936_+\|terminase	terminase	K4NX86	Burkholderia_phage	3.1e-32	41.5
WP_071523691.1\|844039_844546_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	3.8e-30	44.0
WP_071523690.1\|844547_844763_+\|tail	phage tail protein	NA	NA	NA	NA
WP_016533138.1\|844773_845001_+	hypothetical protein	NA	NA	NA	NA
WP_071523689.1\|844990_845512_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	2.1e-31	42.5
WP_071523688.1\|845496_845880_+	hypothetical protein	NA	NA	NA	NA
WP_071523687.1\|846019_846232_+	molecular chaperone DnaK	A0A0M3LS11	Mannheimia_phage	1.3e-11	49.3
WP_071523686.1\|846228_846729_+\|tail	phage tail protein	A0A077K8R3	Ralstonia_phage	3.3e-26	45.9
WP_071523685.1\|846715_847171_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	3.5e-27	47.8
WP_075284881.1\|847185_850026_+\|tail	phage tail tape measure protein	A0A2H4JE61	uncultured_Caudovirales_phage	2.5e-78	37.6
WP_075284880.1\|850145_850769_+\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	1.3e-35	56.5
WP_075284879.1\|850768_851107_+\|plate	baseplate assembly protein W	F1BUP4	Erwinia_phage	3.5e-16	45.7
WP_075284878.1\|851103_852018_+\|plate	baseplate assembly protein	Q19UQ5	Mannheimia_phage	2.0e-98	61.5
WP_071523680.1\|852007_852544_+\|tail	phage tail protein I	Q19UQ4	Mannheimia_phage	1.0e-49	52.2
WP_075284905.1\|855927_857118_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.3e-117	53.4
WP_075284904.1\|857128_857635_+\|tail	phage major tail tube protein	Q19UP8	Mannheimia_phage	3.2e-53	61.3
WP_081376852.1\|857698_858001_+\|tail	phage tail assembly protein	V9IQM4	Stenotrophomonas_phage	3.2e-08	41.0
WP_075284902.1\|858024_858141_+\|tail	GpE family phage tail protein	E5E3Q0	Burkholderia_phage	1.6e-05	60.0
WP_075284901.1\|858209_858647_+\|tail	phage tail protein	A0A0M3LQ18	Mannheimia_phage	1.6e-37	52.4
WP_075284900.1\|858643_859801_+	phage late control D family protein	R9QBT3	Mannheimia_phage	2.3e-107	52.1
WP_075284899.1\|860075_861311_-	hypothetical protein	NA	NA	NA	NA
WP_075284898.1\|861363_861624_-	hypothetical protein	NA	NA	NA	NA
WP_075266399.1\|861742_861937_-	hypothetical protein	NA	NA	NA	NA
WP_075284897.1\|861973_862201_-	hypothetical protein	NA	NA	NA	NA
WP_075284896.1\|862251_862512_-	hypothetical protein	NA	NA	NA	NA
WP_075284895.1\|862700_863393_-	hypothetical protein	A0A2H4J954	uncultured_Caudovirales_phage	4.7e-07	50.0
WP_075284894.1\|863404_864082_-	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	6.8e-35	38.9
WP_005725266.1\|864202_864421_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	2.0e-12	52.4
WP_075284893.1\|864435_864918_+	hypothetical protein	NA	NA	NA	NA
WP_016533190.1\|864917_865172_+	hypothetical protein	NA	NA	NA	NA
WP_075284892.1\|865264_865537_+	hypothetical protein	NA	NA	NA	NA
WP_075284891.1\|865558_865891_+	hypothetical protein	NA	NA	NA	NA
WP_005725275.1\|865874_866102_+	hypothetical protein	NA	NA	NA	NA
WP_075284906.1\|866191_866524_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_075284890.1\|866523_867003_+	hypothetical protein	A0A0M3LQA6	Mannheimia_phage	1.4e-13	35.4
WP_101766759.1\|867002_869171_+	replication endonuclease	F1BUM9	Cronobacter_phage	5.1e-124	42.8
WP_075284889.1\|869170_869530_+	hypothetical protein	NA	NA	NA	NA
WP_075284888.1\|869540_870032_+	hypothetical protein	NA	NA	NA	NA
WP_075284887.1\|870034_870712_+	site-specific DNA-methyltransferase	A0A2I7R760	Vibrio_phage	2.9e-25	34.2
WP_075284886.1\|870696_870984_+	hypothetical protein	A0A0M3LQ35	Mannheimia_phage	3.7e-14	40.9
WP_075284885.1\|871005_871545_+	DUF551 domain-containing protein	A0A0M3LS47	Mannheimia_phage	2.6e-21	40.0
WP_071523732.1\|871555_871786_+	hypothetical protein	NA	NA	NA	NA
WP_075284884.1\|871787_872786_-\|integrase	site-specific integrase	Q19US1	Mannheimia_phage	4.9e-82	49.2
WP_014325839.1\|873440_873932_+	heme utilization cystosolic carrier protein HutX	NA	NA	NA	NA
WP_005751227.1\|873947_874463_+	heme utilization protein HutZ	NA	NA	NA	NA
WP_014325840.1\|874504_877408_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_005721273.1\|877574_877844_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_014325841.1\|877982_879095_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
877960:877977	attR	NA	NA	NA	NA
WP_014325842.1\|879276_881325_+\|tRNA	methionine--tRNA ligase	H2EDI7	Moumouvirus	2.5e-48	30.1
WP_014325843.1\|881458_883618_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_016504385.1\|883848_885183_+	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA
WP_016504384.1\|885192_886176_+	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA
WP_014325846.1\|886178_887186_+	type I-F CRISPR-associated protein Csy3	A0A2D0YYX4	Vibrio_phage	4.9e-45	39.0
WP_014325847.1\|887188_887749_+	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA
WP_005753659.1\|888986_889967_+	type I-F CRISPR-associated endonuclease Cas1	A0A2D0YFC9	Vibrio_phage	8.3e-50	37.8
WP_014325848.1\|889947_893268_+	type I-F CRISPR-associated helicase Cas3	F1D4K0	Vibrio_phage	3.2e-61	29.2
WP_005753664.1\|893325_895182_+	response regulator	A0A1V0SGX0	Hokovirus	1.4e-37	31.8
WP_005725867.1\|895322_895913_+	hypothetical protein	NA	NA	NA	NA
WP_014325849.1\|895976_896780_-	inositol-1-monophosphatase	NA	NA	NA	NA
WP_014325850.1\|896993_897710_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA

DBSCAN-SWA_2

1308997 : 1433673

115

Burkholderia_virus(17.07%)

terminase,tRNA,plate,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014326047.1\|1308997_1310302_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_005754098.1\|1310440_1311142_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_014326048.1\|1311164_1311881_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014326049.1\|1311958_1313719_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_014326050.1\|1313839_1314253_+	YhcB family protein	NA	NA	NA	NA
WP_005754104.1\|1314482_1315184_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_005716150.1\|1315254_1316028_-	TIGR01619 family protein	NA	NA	NA	NA
WP_014326051.1\|1316037_1316841_-	exodeoxyribonuclease III	A0A0N9QXX6	Chrysochromulina_ericina_virus	1.3e-13	26.5
WP_014326052.1\|1317087_1319049_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	7.2e-93	40.6
WP_005726594.1\|1319143_1319800_-	GTP cyclohydrolase I FolE	I6XC45	Vibriophage	2.0e-52	50.2
WP_014326053.1\|1320042_1321263_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_014326054.1\|1321264_1321987_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_014326055.1\|1321999_1322590_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_005726625.1\|1322759_1324274_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-85	39.6
WP_005716269.1\|1324287_1324779_-	colicin V biosynthesis protein	NA	NA	NA	NA
WP_005754120.1\|1324934_1325378_-	DUF412 domain-containing protein	NA	NA	NA	NA
WP_005726626.1\|1325664_1326870_+	acetate kinase	NA	NA	NA	NA
WP_005726628.1\|1326938_1329077_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_014326056.1\|1329150_1330302_-	ribonuclease D	NA	NA	NA	NA
WP_014326057.1\|1330356_1332045_-	long-chain-fatty-acid--CoA ligase FadD	A0A2H4PQM9	Staphylococcus_phage	1.1e-30	25.1
WP_014326058.1\|1332166_1332706_-	Slp family lipoprotein	NA	NA	NA	NA
WP_014326059.1\|1332741_1333461_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_014326060.1\|1333466_1335395_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	3.5e-92	31.7
WP_016504239.1\|1335493_1336315_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA
WP_014326062.1\|1336385_1337345_-	AEC family transporter	NA	NA	NA	NA
WP_005716283.1\|1337475_1337778_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_101766765.1\|1337950_1341997_-	MapB protein	NA	NA	NA	NA
WP_075270726.1\|1342214_1342925_-	helix-turn-helix transcriptional regulator	F6MII3	Haemophilus_phage	6.4e-52	48.4
WP_046338746.1\|1343100_1343367_+	transcriptional regulator	F6MII4	Haemophilus_phage	1.2e-19	63.4
WP_075270727.1\|1343411_1345397_+	DDE endonuclease	M4M9R2	Vibrio_phage	7.1e-157	45.1
WP_075270728.1\|1345407_1346325_+	AAA family ATPase	M4M9P4	Vibrio_phage	1.5e-61	43.5
WP_075270729.1\|1346327_1346624_+	hypothetical protein	NA	NA	NA	NA
WP_075270730.1\|1346637_1346865_+	hypothetical protein	NA	NA	NA	NA
WP_075270731.1\|1346879_1347401_+	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	1.0e-46	54.4
WP_075270732.1\|1347486_1347675_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_158635963.1\|1347685_1347853_+	hypothetical protein	NA	NA	NA	NA
WP_075270733.1\|1347882_1348797_+	hypothetical protein	NA	NA	NA	NA
WP_075270734.1\|1348866_1349367_+	regulatory protein GemA	NA	NA	NA	NA
WP_075270735.1\|1349363_1349906_+	hypothetical protein	A0A0M3LPP6	Mannheimia_phage	2.4e-38	43.7
WP_075270736.1\|1349905_1350268_+	transcriptional regulator	Q6QIE8	Burkholderia_phage	2.9e-24	44.2
WP_075270737.1\|1350386_1350809_+	hypothetical protein	NA	NA	NA	NA
WP_075270738.1\|1350933_1351470_+	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	1.3e-73	69.7
WP_064775722.1\|1351480_1351708_+	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	6.0e-20	72.4
WP_064775721.1\|1351704_1351965_+	DUF2681 domain-containing protein	NA	NA	NA	NA
WP_064775719.1\|1352082_1352412_+	DUF2730 family protein	NA	NA	NA	NA
WP_074865631.1\|1352408_1352711_+	hypothetical protein	A0A0C4UR00	Shigella_phage	2.2e-25	61.5
WP_075270739.1\|1352733_1353306_+	DUF3486 family protein	M4MCR3	Vibrio_phage	1.7e-34	44.0
WP_075270740.1\|1353292_1354600_+\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	6.5e-151	65.7
WP_075270741.1\|1354601_1356017_+	DUF935 family protein	Q6QIC0	Burkholderia_phage	2.0e-113	45.8
WP_016533207.1\|1356017_1357289_+	mu gp30-like protein	J9STS2	Pseudomonas_phage	2.5e-54	49.1
WP_016533208.1\|1357417_1357882_+	phage virion morphogenesis protein	Q6QIB8	Burkholderia_phage	6.8e-10	38.8
WP_016533209.1\|1358132_1359236_+	hypothetical protein	A4JWJ9	Burkholderia_virus	4.6e-73	42.0
WP_016533210.1\|1359254_1360181_+	hypothetical protein	A4JWK0	Burkholderia_virus	1.0e-73	47.9
WP_016533211.1\|1360246_1360564_+	hypothetical protein	NA	NA	NA	NA
WP_016533212.1\|1360563_1360998_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	4.0e-20	37.8
WP_016533213.1\|1361009_1361507_+	hypothetical protein	NA	NA	NA	NA
WP_016533214.1\|1361516_1362902_+\|tail	tail sheath-like protein	A4JWK5	Burkholderia_virus	2.0e-97	44.3
WP_016533215.1\|1362912_1363431_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	3.9e-38	45.0
WP_016533216.1\|1363523_1363793_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_016533217.1\|1363813_1363948_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_016533218.1\|1363963_1364197_-	hypothetical protein	NA	NA	NA	NA
WP_016570132.1\|1364231_1366580_+\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	1.1e-71	38.8
WP_016533316.1\|1366579_1367512_+\|tail	phage tail protein	NA	NA	NA	NA
WP_016533315.1\|1367492_1367723_+	hypothetical protein	Q6QIA3	Burkholderia_phage	7.2e-13	47.8
WP_016533314.1\|1367715_1368780_+	regulator-like protein	NA	NA	NA	NA
WP_016533313.1\|1368766_1369336_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_016533312.1\|1369390_1369756_+\|plate	phage baseplate-like protein	NA	NA	NA	NA
WP_016533311.1\|1369755_1370862_+\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	3.6e-57	36.4
WP_016533310.1\|1370854_1371424_+\|tail	phage tail protein	A4JWL7	Burkholderia_virus	4.5e-40	44.8
WP_016570130.1\|1373971_1374151_+	hypothetical protein	NA	NA	NA	NA
WP_005716336.1\|1378610_1379087_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_075285071.1\|1379253_1380717_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_005726674.1\|1381112_1383383_+	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	3.3e-307	67.8
WP_016533072.1\|1383695_1385204_+	sodium-dependent transporter	NA	NA	NA	NA
WP_005716345.1\|1385203_1385296_+	methionine/alanine import family NSS transporter small subunit	NA	NA	NA	NA
WP_016533071.1\|1385558_1386689_+	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	5.4e-170	78.6
WP_005716349.1\|1386759_1387008_+	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	1.1e-11	50.0
WP_064775630.1\|1390780_1391650_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014326068.1\|1391780_1392122_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_005719748.1\|1392132_1392486_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_005719747.1\|1392545_1393184_+	YkgB family protein	NA	NA	NA	NA
WP_005719746.1\|1393316_1393697_+	hypothetical protein	NA	NA	NA	NA
WP_075285070.1\|1393729_1394020_+	hypothetical protein	NA	NA	NA	NA
WP_075285075.1\|1394263_1394446_+	hypothetical protein	NA	NA	NA	NA
WP_005716403.1\|1394589_1395402_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_005716404.1\|1395456_1396098_-	LysE family transporter	NA	NA	NA	NA
WP_005716406.1\|1396106_1396592_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA
WP_005716408.1\|1396601_1397594_-	thiamine-phosphate kinase	NA	NA	NA	NA
WP_005726695.1\|1397610_1398045_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_016533153.1\|1398050_1398524_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.0e-29	46.7
WP_005726696.1\|1398738_1399950_+	amino acid permease	NA	NA	NA	NA
WP_014326072.1\|1400005_1400668_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_014326073.1\|1400889_1402269_+	Do family serine endopeptidase	A0A1B1IT49	uncultured_Mediterranean_phage	1.0e-24	31.1
WP_014326074.1\|1402363_1403791_-	YdgA family protein	NA	NA	NA	NA
WP_014326075.1\|1404144_1406049_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	5.8e-148	51.3
WP_005751553.1\|1406173_1406572_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014326076.1\|1406645_1407914_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
WP_014326077.1\|1407914_1408445_+	hypothetical protein	NA	NA	NA	NA
WP_005751556.1\|1408492_1409611_+	molecular chaperone DnaJ	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	1.2e-23	35.8
WP_014326078.1\|1409917_1412272_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_005754157.1\|1412360_1413416_-	molybdenum ABC transporter ATP-binding protein ModC	G9BWD6	Planktothrix_phage	3.6e-22	33.3
WP_005716454.1\|1413402_1414131_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_005754159.1\|1414362_1415127_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_075285069.1\|1418311_1419103_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005751563.1\|1419144_1419744_-	5'-deoxynucleotidase	A0A2L0V156	Salmonella_phage	7.0e-07	35.8
WP_014326079.1\|1419763_1420792_-	outer membrane-stress sensor serine endopeptidase DegS	A0A1B1IT49	uncultured_Mediterranean_phage	2.4e-15	28.4
WP_016504331.1\|1420788_1421916_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	7.9e-44	36.4
WP_005716494.1\|1421918_1422368_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_016504332.1\|1422458_1423073_-	uracil-DNA glycosylase-like protein	NA	NA	NA	NA
WP_005726734.1\|1423180_1424605_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_005726735.1\|1424615_1426145_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_014326082.1\|1426518_1427241_+	DNA/RNA nuclease SfsA	NA	NA	NA	NA
WP_014326083.1\|1427456_1427642_-	hypothetical protein	NA	NA	NA	NA
WP_005726740.1\|1427841_1429029_+\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_014326084.1\|1432758_1433673_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA

DBSCAN-SWA_3

1638354 : 1709834

Tupanvirus(14.29%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014326185.1\|1638354_1639650_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_005753601.1\|1639886_1641053_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_005753599.1\|1641164_1642478_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	6.7e-188	81.5
WP_064775638.1\|1642745_1643756_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	2.5e-94	50.6
WP_014326187.1\|1643764_1645042_+	AmpG family muropeptide MFS transporter	NA	NA	NA	NA
WP_014326188.1\|1645190_1645835_+	adenylate kinase	NA	NA	NA	NA
WP_005721145.1\|1645898_1646768_-	succinate--CoA ligase subunit alpha	NA	NA	NA	NA
WP_014326189.1\|1646769_1647936_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_005721143.1\|1648040_1648421_-	VOC family protein	NA	NA	NA	NA
WP_014326190.1\|1648514_1649729_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_014326191.1\|1649803_1652599_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_005721140.1\|1652916_1654203_+	citrate synthase	NA	NA	NA	NA
WP_005724666.1\|1654459_1655458_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_005724665.1\|1655528_1656155_+	TRAP transporter small permease	NA	NA	NA	NA
WP_005721137.1\|1656151_1657435_+	TRAP transporter large permease	NA	NA	NA	NA
WP_005756107.1\|1657492_1658122_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.6e-22	30.4
WP_005724663.1\|1658194_1658755_-	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	9.4e-06	34.4
WP_016504544.1\|1658899_1660402_-	murein L,D-transpeptidase	NA	NA	NA	NA
WP_014326193.1\|1660471_1662523_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	3.9e-81	32.8
WP_016534459.1\|1662615_1663248_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_005751196.1\|1663473_1664730_+	paraquat-inducible protein A	NA	NA	NA	NA
WP_005756098.1\|1664707_1667362_+	PqiB family protein	NA	NA	NA	NA
WP_014326195.1\|1667428_1668667_-	peptidase T	NA	NA	NA	NA
WP_010906551.1\|1668960_1670103_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	8.3e-33	38.3
WP_014326196.1\|1670092_1670947_+	spermidine/putrescine ABC transporter permease PotB	NA	NA	NA	NA
WP_005724657.1\|1670946_1671714_+	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_005724655.1\|1671843_1672890_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_014326197.1\|1673148_1674195_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_005753570.1\|1674299_1675193_+	cytidine deaminase	NA	NA	NA	NA
WP_014326198.1\|1675264_1676551_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-93	51.8
WP_014326199.1\|1676809_1678147_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	3.6e-80	40.3
WP_005753565.1\|1678158_1678776_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_014326200.1\|1678786_1681579_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.8e-82	41.9
WP_005721107.1\|1681583_1682063_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_016504264.1\|1682235_1682571_+	hypothetical protein	NA	NA	NA	NA
WP_014326202.1\|1682592_1683972_-	DNA repair protein RadA	NA	NA	NA	NA
WP_014326203.1\|1683975_1685043_-	inorganic triphosphatase	NA	NA	NA	NA
WP_005721097.1\|1685218_1685899_+	TIGR00153 family protein	NA	NA	NA	NA
WP_014326204.1\|1685925_1687188_+	inorganic phosphate transporter	M4QMY4	Ostreococcus_lucimarinus_virus	4.8e-58	34.9
WP_005724301.1\|1687252_1687864_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_014326205.1\|1687873_1689148_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	1.8e-92	49.5
WP_005753554.1\|1689188_1689806_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_014326206.1\|1689805_1690693_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_005724296.1\|1690762_1691710_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	1.9e-43	38.7
WP_005753553.1\|1691785_1693339_-	murein DD-endopeptidase MepM	A0A2K9VGT1	Pontimonas_phage	8.4e-20	49.6
WP_010906540.1\|1693573_1694365_+	zinc ABC transporter ATP-binding protein ZnuC	A0A2K9L3Z8	Tupanvirus	3.7e-16	32.8
WP_005724066.1\|1694373_1695159_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_005724065.1\|1695235_1696216_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-15	26.4
WP_014326208.1\|1696232_1697231_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-15	29.4
WP_005721070.1\|1697241_1698135_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_005721069.1\|1698157_1699162_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_016570130.1\|1699924_1700104_-	hypothetical protein	NA	NA	NA	NA
WP_075284992.1\|1702635_1703202_-\|tail	phage tail protein	Q6QI98	Burkholderia_phage	3.1e-41	46.4
WP_064775699.1\|1703194_1704307_-\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	3.6e-57	35.6
WP_064775741.1\|1704296_1704662_-\|plate	phage baseplate protein	NA	NA	NA	NA
WP_064775700.1\|1704714_1705296_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_075284991.1\|1705310_1706363_-	hypothetical protein	A4JWL3	Burkholderia_virus	1.5e-60	41.8
WP_075284990.1\|1706362_1706584_-	hypothetical protein	Q6QIA3	Burkholderia_phage	1.1e-10	43.3
WP_075284989.1\|1706571_1707522_-\|tail	phage tail protein	NA	NA	NA	NA
WP_075284988.1\|1707530_1709834_-\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	1.3e-69	38.3

DBSCAN-SWA_4

1718406 : 1731346

Vibrio_phage(38.46%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101766780.1\|1718406_1719849_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	3.4e-116	53.5
WP_075284996.1\|1719844_1721317_-	hypothetical protein	A0A2I7S9C5	Vibrio_phage	3.9e-160	61.4
WP_064775717.1\|1721403_1721985_-	DUF3486 family protein	A0A2I7S9D1	Vibrio_phage	2.4e-36	44.5
WP_074865631.1\|1722007_1722310_-	hypothetical protein	A0A0C4UR00	Shigella_phage	2.2e-25	61.5
WP_074865634.1\|1722306_1722636_-	DUF2730 family protein	NA	NA	NA	NA
WP_064775721.1\|1722753_1723014_-	DUF2681 domain-containing protein	NA	NA	NA	NA
WP_005658916.1\|1723010_1723241_-	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	3.3e-18	70.7
WP_075284982.1\|1723224_1723581_-	hypothetical protein	NA	NA	NA	NA
WP_075284981.1\|1723735_1724272_-	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	1.2e-71	68.6
WP_075284980.1\|1724349_1724712_-	hypothetical protein	NA	NA	NA	NA
WP_075284995.1\|1724786_1725161_-	transcriptional regulator	Q6QIE8	Burkholderia_phage	3.3e-23	46.2
WP_075284979.1\|1725164_1725650_-	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	2.8e-14	33.8
WP_075284978.1\|1725723_1726425_-	DUF2786 domain-containing protein	L7P7W8	Pseudomonas_phage	5.1e-17	30.9
WP_101766772.1\|1726433_1726649_-	hypothetical protein	NA	NA	NA	NA
WP_061406042.1\|1726665_1726857_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_061406043.1\|1726934_1727453_-	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	2.3e-54	64.3
WP_046339044.1\|1727445_1727685_-	hypothetical protein	NA	NA	NA	NA
WP_075284977.1\|1727681_1727957_-	hypothetical protein	NA	NA	NA	NA
WP_075284976.1\|1727974_1728178_-	hypothetical protein	NA	NA	NA	NA
WP_101766773.1\|1728177_1729095_-	AAA family ATPase	A0A2I7S9C3	Vibrio_phage	3.1e-62	43.4
WP_075284974.1\|1729121_1731125_-\|transposase	transposase	M4M9R2	Vibrio_phage	3.5e-95	35.5
WP_075284994.1\|1731109_1731346_-	transcriptional regulator	M1PVU4	Vibrio_phage	5.7e-13	54.0

DBSCAN-SWA_5

2020904 : 2094079

Burkholderia_virus(16.13%)

transposase,head,tRNA,plate,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014326353.1\|2020904_2022176_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_095177589.1\|2022205_2023312_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_014326355.1\|2023335_2024292_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014326356.1\|2024414_2024960_-	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA
WP_010907446.1\|2024998_2026183_-\|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	NA	NA	NA	NA
WP_005755688.1\|2026363_2027617_-	AI-2E family transporter	NA	NA	NA	NA
WP_005725112.1\|2027617_2027956_-	nitrogen regulatory protein P-II	NA	NA	NA	NA
WP_005737641.1\|2028000_2028579_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_005725108.1\|2028604_2029534_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_005725105.1\|2029535_2030165_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_014326357.1\|2030175_2030832_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_005755681.1\|2030846_2032703_-	SLC13 family permease	Q6A201	Oenococcus_phage	1.5e-12	28.0
WP_005725099.1\|2032733_2033327_-	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.2e-27	40.8
WP_095177601.1\|2033328_2034498_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_005719528.1\|2034582_2035371_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_042743290.1\|2035388_2035799_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_005725095.1\|2035952_2036981_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_005719521.1\|2036980_2037562_-	OmpH family outer membrane protein	NA	NA	NA	NA
WP_005755679.1\|2037670_2040046_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_014326359.1\|2040075_2041404_-\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_005758173.1\|2041425_2042295_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_005725086.1\|2042311_2043034_-	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	1.1e-25	45.2
WP_025248511.1\|2043083_2044283_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_014325726.1\|2044417_2044882_-\|transposase	IS200/IS605 family transposase	A0A0A8WIU6	Clostridium_phage	2.3e-13	36.1
WP_005725082.1\|2045166_2045724_-	ribosome recycling factor	NA	NA	NA	NA
WP_005725080.1\|2045799_2046528_-	UMP kinase	NA	NA	NA	NA
WP_005719507.1\|2046671_2047520_-	elongation factor Ts	NA	NA	NA	NA
WP_005725076.1\|2047661_2048384_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_014326361.1\|2048642_2049608_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014326362.1\|2049622_2052355_+	ribosome-associated ATPase/putative transporter RbbA	A0A2H4PQG7	Staphylococcus_phage	3.9e-20	29.4
WP_005752424.1\|2052356_2053481_+	ABC-2 transporter permease	NA	NA	NA	NA
WP_014326363.1\|2053490_2054882_+	TolC family protein	NA	NA	NA	NA
WP_014326364.1\|2054954_2056835_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_016504363.1\|2056965_2059380_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	6.5e-221	52.0
WP_101766776.1\|2059504_2060740_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.6e-125	56.8
WP_016570130.1\|2060942_2061122_-	hypothetical protein	NA	NA	NA	NA
WP_075284992.1\|2063653_2064220_-\|tail	phage tail protein	Q6QI98	Burkholderia_phage	3.1e-41	46.4
WP_064775699.1\|2064212_2065325_-\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	3.6e-57	35.6
WP_064775741.1\|2065314_2065680_-\|plate	phage baseplate protein	NA	NA	NA	NA
WP_064775700.1\|2065732_2066314_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_075284991.1\|2066328_2067381_-	hypothetical protein	A4JWL3	Burkholderia_virus	1.5e-60	41.8
WP_075284990.1\|2067380_2067602_-	hypothetical protein	Q6QIA3	Burkholderia_phage	1.1e-10	43.3
WP_075284989.1\|2067589_2068540_-\|tail	phage tail protein	NA	NA	NA	NA
WP_075284988.1\|2068548_2070852_-\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	1.3e-69	38.3
WP_064775705.1\|2070891_2071083_+	hypothetical protein	NA	NA	NA	NA
WP_075284997.1\|2071079_2071202_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_064775706.1\|2071228_2071507_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_064775707.1\|2071588_2072104_-\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_101766767.1\|2072103_2073498_-\|tail	phage tail protein	A4JWK5	Burkholderia_virus	5.1e-109	47.3
WP_075284986.1\|2073504_2073972_-	hypothetical protein	NA	NA	NA	NA
WP_064775710.1\|2073971_2074421_-	DUF1320 domain-containing protein	NA	NA	NA	NA
WP_064775711.1\|2074420_2074879_-	hypothetical protein	NA	NA	NA	NA
WP_064775712.1\|2074931_2075858_-	hypothetical protein	A4JWK0	Burkholderia_virus	1.7e-76	49.3
WP_075284985.1\|2075867_2076971_-	peptidase	A4JWJ9	Burkholderia_virus	4.3e-71	41.8
WP_075284984.1\|2077207_2077663_-	phage virion morphogenesis protein	Q5ZQY1	Pseudomonas_phage	1.9e-20	40.1
WP_064775715.1\|2077864_2078053_-	hypothetical protein	NA	NA	NA	NA
WP_064775742.1\|2078189_2079455_-\|head	phage head morphogenesis protein	J9STS2	Pseudomonas_phage	3.1e-65	44.4
WP_101766780.1\|2079456_2080899_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	3.4e-116	53.5
WP_075284996.1\|2080894_2082367_-	hypothetical protein	A0A2I7S9C5	Vibrio_phage	3.9e-160	61.4
WP_064775717.1\|2082453_2083035_-	DUF3486 family protein	A0A2I7S9D1	Vibrio_phage	2.4e-36	44.5
WP_074865631.1\|2083057_2083360_-	hypothetical protein	A0A0C4UR00	Shigella_phage	2.2e-25	61.5
WP_074865634.1\|2083356_2083686_-	DUF2730 family protein	NA	NA	NA	NA
WP_064775721.1\|2083803_2084064_-	DUF2681 domain-containing protein	NA	NA	NA	NA
WP_005658916.1\|2084060_2084291_-	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	3.3e-18	70.7
WP_075284982.1\|2084274_2084631_-	hypothetical protein	NA	NA	NA	NA
WP_075284981.1\|2084785_2085322_-	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	1.2e-71	68.6
WP_075284980.1\|2085399_2085762_-	hypothetical protein	NA	NA	NA	NA
WP_075284995.1\|2085836_2086211_-	transcriptional regulator	Q6QIE8	Burkholderia_phage	3.3e-23	46.2
WP_075284979.1\|2086214_2086700_-	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	2.8e-14	33.8
WP_075284978.1\|2086773_2087475_-	DUF2786 domain-containing protein	L7P7W8	Pseudomonas_phage	5.1e-17	30.9
WP_101766772.1\|2087483_2087699_-	hypothetical protein	NA	NA	NA	NA
WP_061406042.1\|2087715_2087907_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_061406043.1\|2087984_2088503_-	host-nuclease inhibitor protein Gam	C9DGL8	Escherichia_phage	2.3e-54	64.3
WP_046339044.1\|2088495_2088735_-	hypothetical protein	NA	NA	NA	NA
WP_075284977.1\|2088731_2089007_-	hypothetical protein	NA	NA	NA	NA
WP_075284976.1\|2089024_2089228_-	hypothetical protein	NA	NA	NA	NA
WP_101766773.1\|2089227_2090145_-	AAA family ATPase	A0A2I7S9C3	Vibrio_phage	3.1e-62	43.4
WP_075284974.1\|2090171_2092175_-\|transposase	transposase	M4M9R2	Vibrio_phage	3.5e-95	35.5
WP_075284994.1\|2092159_2092396_-	transcriptional regulator	M1PVU4	Vibrio_phage	5.7e-13	54.0
WP_101766774.1\|2092629_2093124_+	ci repressor-like protein	NA	NA	NA	NA
WP_005725064.1\|2093497_2094079_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.1e-60	62.4

Anti-CRISPR protein detection

Acr_ID: NZ_CP015567.1|WP_016504264.1|1682235_1682571_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP015567.1|WP_016504264.1|1682235_1682571_+|hypothetical-protein

1682235_1682571_+

111 aa aa

HTH_ASNC

Identity	Hit_domain_coverage
0.5181818181818182	1.0

1638354-1709834

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP015567_2	Unclear	2.28\|2212940\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2212940-2212971	32	1701555-1701524	0
NZ_CP015567_2	Unclear	2.29\|2213000\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213000-2213031	32	1701006-1700975	1
NZ_CP015567_2	Unclear	2.32\|2213181\|32\|NZ_CP015567\|CRISPRCasFinder,CRT,PILER-CR	2213181-2213212	32	1701718-1701687	0
NZ_CP015567_2	Unclear	2.45\|2213961\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2213961-2213992	32	1700197-1700228	0
NZ_CP015567_2	Unclear	2.46\|2214021\|32\|NZ_CP015567\|CRISPRCasFinder,CRT	2214021-2214052	32	1701154-1701123	1

1. spacer 2.28|2212940|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015567 position: 1701555-1701524, mismatch: 0

ttgattttaaaggcgtggaggtttcttcaacg	CRISPR spacer
ttgattttaaaggcgtggaggtttcttcaacg	Protospacer
********************************

2. spacer 2.29|2213000|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015567 position: 1701006-1700975, mismatch: 1

tgaaatacacaaccgatattgaaggggtaaat	CRISPR spacer
tgaaatacacaaccgatattgaaggggtgaat	Protospacer
****************************.***

3. spacer 2.32|2213181|32|NZ_CP015567|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015567 position: 1701718-1701687, mismatch: 0

ctcacgcaatcgcacaacaattttattaattt	CRISPR spacer
ctcacgcaatcgcacaacaattttattaattt	Protospacer
********************************

4. spacer 2.45|2213961|32|NZ_CP015567|CRISPRCasFinder,CRT matches to NZ_CP015567 position: 1700197-1700228, mismatch: 0

acacgatactctcccccgtcctaagctccgac	CRISPR spacer
acacgatactctcccccgtcctaagctccgac	Protospacer
********************************

5. spacer 2.46|2214021|32|NZ_CP015567|CRISPRCasFinder,CRT matches to NZ_CP015567 position: 1701154-1701123, mismatch: 1

gtgcattacgacatggtgaaggtgacggataa	CRISPR spacer
gtgcattacgatatggtgaaggtgacggataa	Protospacer
***********.********************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015567

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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