CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP024131	Escherichia coli strain 14EC007 chromosome, complete genome	10 crisprs	csa3,PD-DExK,cas3,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	25	14
NZ_CP024133	Escherichia coli strain 14EC007 plasmid p14EC007b, complete sequence	0 crisprs	NA	0	3
NZ_CP024132	Escherichia coli strain 14EC007 plasmid p14EC007a, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024131_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_1

1036472-1036988

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

8 spacers

The CRISPR arrays of NZ_CP024131_1

>merge|NZ_CP024131|1|1036472-1036988|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCCATAATATTAATATAATCCACATGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCATATCAAGAATTTATGGACTCGGGTGGCAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAAACCGGGCAATCGCAAAAAGGCGTAATGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP024131|1|1|1036472-1036987|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_CP024131|1|1|1036472-1036988|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCCATAATATTAATATAATCCACATGAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATATCAAGAATTTATGGACTCGGGTGGCAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP024131|1|1|1036594-1036987|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_000059307.1\|1042359_1043814_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP024131.1\|WP_001098105.1\|1043907_1045245_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP024131.1\|WP_000389121.1\|1047849_1049121_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP024131.1\|WP_001071648.1\|1030193_1030985_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP024131.1\|WP_001299652.1\|1045222_1046002_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP024131.1\|WP_001268460.1\|1034295_1035168_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP024131.1\|WP_000254738.1\|1029787_1030123_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP024131.1\|WP_000226815.1\|1027227_1029462_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP024131.1\|WP_001288228.1\|1035181_1035322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024131.1\|WP_000046812.1\|1025878_1027180_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP024131.1\|WP_000021321.1\|1041504_1042290_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP024131.1\|WP_000581937.1\|1029539_1029788_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP024131.1\|WP_000987944.1\|1049198_1049564_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP024131.1\|WP_000039688.1\|1037626_1039105_-\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP024131.1\|WP_000109526.1\|1047598_1047859_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP024131.1\|WP_001130266.1\|1047006_1047582_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP024131.1\|WP_000036723.1\|1032937_1034236_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP024131.1\|WP_000210878.1\|1031212_1032850_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP024131.1\|WP_001199973.1\|1035460_1036132_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP024131.1\|WP_001299097.1\|1045998_1046859_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_001098105.1\|1043907_1045245_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP024131.1\|WP_000389121.1\|1047849_1049121_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
NZ_CP024131.1\|WP_001071648.1\|1030193_1030985_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP024131.1\|WP_001299652.1\|1045222_1046002_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP024131.1\|WP_001268460.1\|1034295_1035168_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
NZ_CP024131.1\|WP_000254738.1\|1029787_1030123_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP024131.1\|WP_000226815.1\|1027227_1029462_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP024131.1\|WP_000059307.1\|1042359_1043814_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.73778e-83
NZ_CP024131.1\|WP_000046812.1\|1025878_1027180_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP024131.1\|WP_000021321.1\|1041504_1042290_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP024131.1\|WP_000581937.1\|1029539_1029788_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP024131.1\|WP_000987944.1\|1049198_1049564_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
NZ_CP024131.1\|WP_000039688.1\|1037626_1039105_-\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
NZ_CP024131.1\|WP_000109526.1\|1047598_1047859_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_CP024131.1\|WP_001130266.1\|1047006_1047582_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP024131.1\|WP_000036723.1\|1032937_1034236_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP024131.1\|WP_000210878.1\|1031212_1032850_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP024131.1\|WP_001199973.1\|1035460_1036132_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP024131.1\|WP_001299097.1\|1045998_1046859_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90

>NZ_CP024131.1|WP_001199973.1|1035460_1036132_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP024131.1|WP_001288228.1|1035181_1035322_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP024131.1|WP_001268460.1|1034295_1035168_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP024131.1|WP_000036723.1|1032937_1034236_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP024131.1|WP_000210878.1|1031212_1032850_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP024131.1|WP_001071648.1|1030193_1030985_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP024131.1|WP_000254738.1|1029787_1030123_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP024131.1|WP_000581937.1|1029539_1029788_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP024131.1|WP_000226815.1|1027227_1029462_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP024131.1|WP_000046812.1|1025878_1027180_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP024131.1|WP_000039688.1|1037626_1039105_-|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP024131.1|WP_000021321.1|1041504_1042290_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP024131.1|WP_000059307.1|1042359_1043814_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP024131.1|WP_001098105.1|1043907_1045245_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP024131.1|WP_001299652.1|1045222_1046002_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP024131.1|WP_001299097.1|1045998_1046859_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP024131.1|WP_001130266.1|1047006_1047582_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP024131.1|WP_000109526.1|1047598_1047859_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP024131.1|WP_000389121.1|1047849_1049121_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP024131.1|WP_000987944.1|1049198_1049564_-|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE

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Crispr_ID: NZ_CP024131_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_2

1065404-1066469

TypeI-E

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

17 spacers

cas2,cas1,cas6e,cas5,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP024131_2

>merge|NZ_CP024131|2|1065404-1066469|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGACAATCCCACGCCGATAATCTCTATACAGCAAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCACGGAATTGTTATGCTGTTCCCCTGACCGGAGTTCCCCGCGCCAGCGGGGATAAACCGATCCGCCGCCGGTTAACGCTGGACCAGTTCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGCGAGTCCGTCAGCGGTGCGCCGCTGCAACAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGACAATGTGAAAAGCTTAATATTCATTACATGAGTTCCCCGCGCCAGCGGGGATAAACCGCGACGTTTTCTAATATCACCCAGCAATCAATTGAGTTCCCCGCGCCAGCGGGGATAAACCGATTTCATCAAAGCATTAAGGGATGGAATAAAGGAGTTCCCCGCGCCAGCGGGGATAAACCGTCATGAATATGGGGAAAACGAACAATCTGTTTGAGTTCCCCGCGCCAGCGGGGATAAACCGATGACCATTGGTGAACGCATCCGCTTTCGCCGGAGTTCCCCGCGCCAGCGGGGATAAACCGAACCTTGTCGGGTCGCCCGTGCGTCATGATGAGAGTTCCCCGCGCCAGCGGGGATAAACCGAGTTCCCACAAACCTGGGTGCATCTCGCGTTCGAGTTCCCCGCGCCAGCGGGGATAAACCGACTGCAAAGTTCTTCACGCTGGTTTTTATGCAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCGAAACAACGCCAGCAAAATCGACCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGGGATATAGAGCGGGTACTCGAGCGAAGCGGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGGACAGGCCGTGACGGTTGCCATTGAGTCGAGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGTTCTCTTCAAAACGCCGAACAACCAAGAGTTCCCCGCGTCAGCGAGGATAAACCGGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP024131|2|2|1065404-1066347|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP024131|2|2|1065404-1066469|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP024131|2|2|1065404-1066469|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCCCACGCCGATAATCTCTATACAGCAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCACGGAATTGTTATGCTGTTCCCCTGACCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGACAATGTGAAAAGCTTAATATTCATTACAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGTTTTCTAATATCACCCAGCAATCAATT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCATCAAAGCATTAAGGGATGGAATAAAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGAATATGGGGAAAACGAACAATCTGTTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATGACCATTGGTGAACGCATCCGCTTTCGCCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCGAAACAACGCCAGCAAAATCGACCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_101972814.1\|1058951_1060460_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP024131.1\|WP_001258269.1\|1062818_1063493_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP024131.1\|WP_085947970.1\|1057351_1058565_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP024131.1\|WP_001219242.1\|1072327_1072807_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP024131.1\|WP_000246138.1\|1071617_1072328_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP024131.1\|WP_001290699.1\|1051678_1053391_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP024131.1\|WP_000517476.1\|1071287_1071599_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP024131.1\|WP_001246104.1\|1070770_1071094_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP024131.1\|WP_000568943.1\|1072803_1073853_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP024131.1\|WP_000433156.1\|1054557_1057224_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP024131.1\|WP_000752797.1\|1060452_1060935_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP024131.1\|WP_000372108.1\|1067778_1068687_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP024131.1\|WP_001173673.1\|1070115_1070721_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP024131.1\|WP_000039863.1\|1053464_1054199_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP024131.1\|WP_101972816.1\|1064094_1065012_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP024131.1\|WP_000281399.1\|1063479_1064079_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP024131.1\|WP_101972817.1\|1066489_1067527_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP024131.1\|WP_001295182.1\|1073833_1074595_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP024131.1\|WP_001090361.1\|1068688_1070116_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP024131.1\|WP_001416755.1\|1065013_1065298_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_101972814.1\|1058951_1060460_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP024131.1\|WP_001258269.1\|1062818_1063493_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.70134e-100
NZ_CP024131.1\|WP_085947970.1\|1057351_1058565_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.46609e-155
NZ_CP024131.1\|WP_001219242.1\|1072327_1072807_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP024131.1\|WP_000246138.1\|1071617_1072328_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP024131.1\|WP_001290699.1\|1051678_1053391_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP024131.1\|WP_000517476.1\|1071287_1071599_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP024131.1\|WP_001246104.1\|1070770_1071094_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP024131.1\|WP_000568943.1\|1072803_1073853_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP024131.1\|WP_000433156.1\|1054557_1057224_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP024131.1\|WP_000752797.1\|1060452_1060935_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.83779e-33
NZ_CP024131.1\|WP_000372108.1\|1067778_1068687_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP024131.1\|WP_001173673.1\|1070115_1070721_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP024131.1\|WP_000039863.1\|1053464_1054199_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	6.7075e-138
NZ_CP024131.1\|WP_101972816.1\|1064094_1065012_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.20742e-157
NZ_CP024131.1\|WP_000281399.1\|1063479_1064079_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
NZ_CP024131.1\|WP_101972817.1\|1066489_1067527_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP024131.1\|WP_001295182.1\|1073833_1074595_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP024131.1\|WP_001090361.1\|1068688_1070116_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP024131.1\|WP_001416755.1\|1065013_1065298_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62

>NZ_CP024131.1|WP_001416755.1|1065013_1065298_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>NZ_CP024131.1|WP_101972816.1|1064094_1065012_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSCVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYVPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRSPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP024131.1|WP_000281399.1|1063479_1064079_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP024131.1|WP_001258269.1|1062818_1063493_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP024131.1|WP_000752797.1|1060452_1060935_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP024131.1|WP_101972814.1|1058951_1060460_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIDPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWVKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALACATLYKHLRELKPQGGPSNG
>NZ_CP024131.1|WP_085947970.1|1057351_1058565_+|IS3-family-transposase
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA
>NZ_CP024131.1|WP_000433156.1|1054557_1057224_+|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISDFGKNGERNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSYEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNQDGWFWQGNSIVITYTRDEGMTRVIPANPK
>NZ_CP024131.1|WP_000039863.1|1053464_1054199_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>NZ_CP024131.1|WP_001290699.1|1051678_1053391_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP024131.1|WP_101972817.1|1066489_1067527_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKNPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP024131.1|WP_000372108.1|1067778_1068687_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP024131.1|WP_001090361.1|1068688_1070116_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP024131.1|WP_001173673.1|1070115_1070721_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP024131.1|WP_001246104.1|1070770_1071094_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP024131.1|WP_000517476.1|1071287_1071599_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP024131.1|WP_000246138.1|1071617_1072328_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP024131.1|WP_001219242.1|1072327_1072807_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP024131.1|WP_000568943.1|1072803_1073853_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP024131.1|WP_001295182.1|1073833_1074595_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_CP024131_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_3

1542727-1542844

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_3

>merge|NZ_CP024131|3|1542727-1542844|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>NZ_CP024131|3|3|1542727-1542844|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_000857257.1\|1535738_1537367_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP024131.1\|WP_000140569.1\|1532210_1533110_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP024131.1\|WP_000012266.1\|1553369_1555058_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP024131.1\|WP_001220081.1\|1545844_1549597_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP024131.1\|WP_001075164.1\|1542863_1545149_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP024131.1\|WP_000150333.1\|1532012_1532198_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NZ_CP024131.1\|WP_001225852.1\|1561870_1562647_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP024131.1\|WP_001209902.1\|1534489_1535749_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP024131.1\|WP_000990753.1\|1549724_1550447_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP024131.1\|WP_001281239.1\|1550593_1553221_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP024131.1\|WP_001104549.1\|1560216_1561866_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP024131.1\|WP_000779102.1\|1539002_1540079_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP024131.1\|WP_000135040.1\|1541245_1541500_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP024131.1\|WP_000301050.1\|1540541_1541192_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP024131.1\|WP_000786544.1\|1562720_1563905_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP024131.1\|WP_122994732.1\|1555821_1560216_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP024131.1\|WP_001000359.1\|1533302_1534493_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP024131.1\|WP_000948732.1\|1537639_1538998_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP024131.1\|WP_000332037.1\|1541499_1542630_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP024131.1\|WP_001325103.1\|1555054_1555678_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_000857257.1\|1535738_1537367_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP024131.1\|WP_000140569.1\|1532210_1533110_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP024131.1\|WP_000012266.1\|1553369_1555058_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP024131.1\|WP_001220081.1\|1545844_1549597_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP024131.1\|WP_001075164.1\|1542863_1545149_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP024131.1\|WP_000150333.1\|1532012_1532198_-\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.35852e-30
NZ_CP024131.1\|WP_001225852.1\|1561870_1562647_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
NZ_CP024131.1\|WP_001209902.1\|1534489_1535749_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP024131.1\|WP_000990753.1\|1549724_1550447_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
NZ_CP024131.1\|WP_001281239.1\|1550593_1553221_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP024131.1\|WP_001104549.1\|1560216_1561866_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.75964e-127
NZ_CP024131.1\|WP_000779102.1\|1539002_1540079_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP024131.1\|WP_000135040.1\|1541245_1541500_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP024131.1\|WP_000301050.1\|1540541_1541192_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_CP024131.1\|WP_000786544.1\|1562720_1563905_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP024131.1\|WP_122994732.1\|1555821_1560216_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP024131.1\|WP_001000359.1\|1533302_1534493_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP024131.1\|WP_000948732.1\|1537639_1538998_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP024131.1\|WP_000332037.1\|1541499_1542630_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP024131.1\|WP_001325103.1\|1555054_1555678_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	3.71745e-140

>NZ_CP024131.1|WP_000332037.1|1541499_1542630_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP024131.1|WP_000135040.1|1541245_1541500_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP024131.1|WP_000301050.1|1540541_1541192_+|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP024131.1|WP_000779102.1|1539002_1540079_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP024131.1|WP_000948732.1|1537639_1538998_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP024131.1|WP_000857257.1|1535738_1537367_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP024131.1|WP_001209902.1|1534489_1535749_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP024131.1|WP_001000359.1|1533302_1534493_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP024131.1|WP_000140569.1|1532210_1533110_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>NZ_CP024131.1|WP_000150333.1|1532012_1532198_-|hypothetical-protein
MTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH
>NZ_CP024131.1|WP_001075164.1|1542863_1545149_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP024131.1|WP_001220081.1|1545844_1549597_+|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPEPDPTPDPDPTPDPDPTPDPAPVPVYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP024131.1|WP_000990753.1|1549724_1550447_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP024131.1|WP_001281239.1|1550593_1553221_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATAHGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP024131.1|WP_000012266.1|1553369_1555058_+|DUF2138-domain-containing-protein
MSGEKKAEGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDTSFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKNRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP024131.1|WP_001325103.1|1555054_1555678_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQAGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP024131.1|WP_122994732.1|1555821_1560216_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQTKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVTLNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPVQQSVAAGSEWTGMQVK
>NZ_CP024131.1|WP_001104549.1|1560216_1561866_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP024131.1|WP_001225852.1|1561870_1562647_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP024131.1|WP_000786544.1|1562720_1563905_-|acetyl-CoA-C-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: NZ_CP024131_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_4

2289955-2290078

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_4

>merge|NZ_CP024131|4|2289955-2290078|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP024131|4|4|2289955-2290078|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_000716937.1\|2287784_2289389_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP024131.1\|WP_001349911.1\|2285506_2286175_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP024131.1\|WP_000493947.1\|2293277_2293919_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP024131.1\|WP_053887367.1\|2282042_2282669_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP024131.1\|WP_001182363.1\|2295397_2296609_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP024131.1\|WP_000102278.1\|2298974_2299064_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP024131.1\|WP_000587561.1\|2286960_2287773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP024131.1\|WP_000701040.1\|2299229_2300399_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP024131.1\|WP_000269493.1\|2296721_2297654_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP024131.1\|WP_000190982.1\|2297650_2298676_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP024131.1\|WP_033803275.1\|2282689_2284792_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP024131.1\|WP_000007283.1\|2300633_2301215_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP024131.1\|WP_001295403.1\|2279408_2280821_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP024131.1\|WP_000212680.1\|2289514_2289820_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP024131.1\|WP_001174940.1\|2291689_2293063_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP024131.1\|WP_001069987.1\|2286171_2286957_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP024131.1\|WP_000504352.1\|2284795_2285443_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP024131.1\|WP_000098896.1\|2293958_2295107_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP024131.1\|WP_000534307.1\|2290392_2291649_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP024131.1\|WP_000528342.1\|2281377_2281587_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_000716937.1\|2287784_2289389_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP024131.1\|WP_001349911.1\|2285506_2286175_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
NZ_CP024131.1\|WP_000493947.1\|2293277_2293919_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP024131.1\|WP_053887367.1\|2282042_2282669_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	2.08436e-139
NZ_CP024131.1\|WP_001182363.1\|2295397_2296609_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP024131.1\|WP_000587561.1\|2286960_2287773_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.59319e-174
NZ_CP024131.1\|WP_000701040.1\|2299229_2300399_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP024131.1\|WP_000269493.1\|2296721_2297654_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP024131.1\|WP_000190982.1\|2297650_2298676_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP024131.1\|WP_033803275.1\|2282689_2284792_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP024131.1\|WP_000007283.1\|2300633_2301215_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP024131.1\|WP_001295403.1\|2279408_2280821_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP024131.1\|WP_000212680.1\|2289514_2289820_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
NZ_CP024131.1\|WP_001174940.1\|2291689_2293063_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP024131.1\|WP_001069987.1\|2286171_2286957_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.01591e-161
NZ_CP024131.1\|WP_000504352.1\|2284795_2285443_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.81741e-122
NZ_CP024131.1\|WP_000098896.1\|2293958_2295107_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP024131.1\|WP_000534307.1\|2290392_2291649_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP024131.1\|WP_000528342.1\|2281377_2281587_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34

>NZ_CP024131.1|WP_000212680.1|2289514_2289820_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP024131.1|WP_000716937.1|2287784_2289389_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP024131.1|WP_000587561.1|2286960_2287773_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP024131.1|WP_001069987.1|2286171_2286957_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPLPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP024131.1|WP_001349911.1|2285506_2286175_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP024131.1|WP_000504352.1|2284795_2285443_+|YdhW-family-putative-oxidoreductase-system-protein
MGEMNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP024131.1|WP_033803275.1|2282689_2284792_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRVTTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAVDLAAHNLLPV
>NZ_CP024131.1|WP_053887367.1|2282042_2282669_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCSNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP024131.1|WP_000528342.1|2281377_2281587_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP024131.1|WP_001295403.1|2279408_2280821_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP024131.1|WP_000534307.1|2290392_2291649_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGTGWLKVATGGIVKCTQYGNNGTLSVSDGAIATDVVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIRVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP024131.1|WP_001174940.1|2291689_2293063_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR
>NZ_CP024131.1|WP_000493947.1|2293277_2293919_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP024131.1|WP_000098896.1|2293958_2295107_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP024131.1|WP_001182363.1|2295397_2296609_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP024131.1|WP_000269493.1|2296721_2297654_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP024131.1|WP_000190982.1|2297650_2298676_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP024131.1|WP_000102278.1|2298974_2299064_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP024131.1|WP_000701040.1|2299229_2300399_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP024131.1|WP_000007283.1|2300633_2301215_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP024131_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_5

3013202-3013293

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_5

>merge|NZ_CP024131|5|3013202-3013293|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP024131|5|5|3013202-3013293|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_001143120.1\|3014333_3014561_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP024131.1\|WP_001264933.1\|3024134_3025163_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
NZ_CP024131.1\|WP_000420621.1\|3017648_3018569_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP024131.1\|WP_000191700.1\|3006543_3007182_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP024131.1\|WP_001459640.1\|3009658_3010459_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP024131.1\|WP_001063152.1\|3019621_3022168_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP024131.1\|WP_001307708.1\|3008560_3009253_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP024131.1\|WP_001028095.1\|3011069_3011564_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP024131.1\|WP_001230242.1\|3022167_3023340_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP024131.1\|WP_000209894.1\|3019025_3019625_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP024131.1\|WP_001044279.1\|3014598_3015840_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP024131.1\|WP_001459639.1\|3011584_3012913_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP024131.1\|WP_001126772.1\|3009264_3009651_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP024131.1\|WP_001151437.1\|3013716_3014313_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP024131.1\|WP_001459641.1\|3002541_3006504_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP024131.1\|WP_000979516.1\|3002277_3002487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024131.1\|WP_000024560.1\|3018568_3018874_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP024131.1\|WP_001352489.1\|3007469_3008561_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP024131.1\|WP_001120125.1\|3023469_3024162_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP024131.1\|WP_001001185.1\|3010468_3011059_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_001264933.1\|3024134_3025163_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	1.32852e-176
NZ_CP024131.1\|WP_000420621.1\|3017648_3018569_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP024131.1\|WP_000191700.1\|3006543_3007182_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.12845e-153
NZ_CP024131.1\|WP_001459640.1\|3009658_3010459_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	2.13644e-140
NZ_CP024131.1\|WP_001063152.1\|3019621_3022168_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP024131.1\|WP_001307708.1\|3008560_3009253_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	5.84226e-169
NZ_CP024131.1\|WP_001028095.1\|3011069_3011564_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_CP024131.1\|WP_001230242.1\|3022167_3023340_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP024131.1\|WP_000209894.1\|3019025_3019625_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.00485e-84
NZ_CP024131.1\|WP_001044279.1\|3014598_3015840_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP024131.1\|WP_001459639.1\|3011584_3012913_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP024131.1\|WP_001126772.1\|3009264_3009651_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	1.36916e-84
NZ_CP024131.1\|WP_001151437.1\|3013716_3014313_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP024131.1\|WP_001459641.1\|3002541_3006504_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP024131.1\|WP_001143120.1\|3014333_3014561_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP024131.1\|WP_000024560.1\|3018568_3018874_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_CP024131.1\|WP_001352489.1\|3007469_3008561_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP024131.1\|WP_001120125.1\|3023469_3024162_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.16516e-137
NZ_CP024131.1\|WP_001001185.1\|3010468_3011059_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	4.81999e-128

>NZ_CP024131.1|WP_001459639.1|3011584_3012913_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGMNPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDYTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP024131.1|WP_001028095.1|3011069_3011564_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP024131.1|WP_001001185.1|3010468_3011059_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFNRQYVDDAFFAGSTLKSNLLINIGYGDNSKLYARLPRLSFEEACGLL
>NZ_CP024131.1|WP_001459640.1|3009658_3010459_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPMQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP024131.1|WP_001126772.1|3009264_3009651_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNMLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP024131.1|WP_001307708.1|3008560_3009253_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>NZ_CP024131.1|WP_001352489.1|3007469_3008561_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAVRMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP024131.1|WP_000191700.1|3006543_3007182_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
>NZ_CP024131.1|WP_001459641.1|3002541_3006504_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP024131.1|WP_000979516.1|3002277_3002487_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP024131.1|WP_001151437.1|3013716_3014313_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP024131.1|WP_001143120.1|3014333_3014561_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP024131.1|WP_001044279.1|3014598_3015840_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK
>NZ_CP024131.1|WP_000420621.1|3017648_3018569_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP024131.1|WP_000024560.1|3018568_3018874_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP024131.1|WP_000209894.1|3019025_3019625_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP024131.1|WP_001063152.1|3019621_3022168_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAVKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPQLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKHIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQTYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP024131.1|WP_001230242.1|3022167_3023340_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP024131.1|WP_001120125.1|3023469_3024162_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP024131.1|WP_001264933.1|3024134_3025163_-|TMAO-reductase-system-periplasmic-protein-TorT
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK

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Crispr_ID: NZ_CP024131_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_6

3445870-3446014

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_6

>merge|NZ_CP024131|6|3445870-3446014|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>NZ_CP024131|6|6|3445870-3446014|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_001204774.1\|3440269_3440653_-\|antitermination-protein-QuuD	unknown	unknown	gnl\|CDD\|368957
NZ_CP024131.1\|WP_001036475.1\|3448481_3449915_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP024131.1\|WP_000815435.1\|3452220_3453216_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_CP024131.1\|WP_001300666.1\|3453370_3454189_+\|pyridoxal-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_CP024131.1\|WP_000891515.1\|3456878_3457028_-\|multidrug-efflux-pump-accessory-protein-AcrZ	unknown	unknown	gnl\|CDD\|371231
NZ_CP024131.1\|WP_001091569.1\|3444520_3445804_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP024131.1\|WP_000386643.1\|3441444_3441786_-\|DUF2591-family-protein	unknown	unknown	gnl\|CDD\|107039
NZ_CP024131.1\|WP_000723652.1\|3449990_3451043_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
NZ_CP024131.1\|WP_095762509.1\|3438998_3440081_+\|porin	unknown	unknown	gnl\|CDD\|182543
NZ_CP024131.1\|WP_000604034.1\|3455250_3455940_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP024131.1\|WP_032270810.1\|3440738_3440879_-\|YlcG-family-protein	unknown	unknown	unknown
NZ_CP024131.1\|WP_000533645.1\|3443315_3444386_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271181
NZ_CP024131.1\|WP_000113003.1\|3455939_3456713_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP024131.1\|WP_095762513.1\|3440875_3441238_-\|crossover-junction-endodeoxyribonuclease-RusA	unknown	unknown	gnl\|CDD\|182075
NZ_CP024131.1\|WP_000593906.1\|3446037_3448299_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
NZ_CP024131.1\|WP_000891669.1\|3454189_3455248_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP024131.1\|WP_000950954.1\|3441257_3441452_-\|protein-ninF	unknown	unknown	gnl\|CDD\|283468
NZ_CP024131.1\|WP_085947970.1\|3441951_3443165_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP024131.1\|WP_032192725.1\|3438229_3438424_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024131.1\|WP_000679972.1\|3451226_3452180_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_001204774.1\|3440269_3440653_-\|antitermination-protein-QuuD	gnl\|CDD\|368957	pfam06530, Phage_antitermQ, Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	3.05837e-71
NZ_CP024131.1\|WP_001036475.1\|3448481_3449915_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_CP024131.1\|WP_000815435.1\|3452220_3453216_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
NZ_CP024131.1\|WP_001300666.1\|3453370_3454189_+\|pyridoxal-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_CP024131.1\|WP_001091569.1\|3444520_3445804_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP024131.1\|WP_000386643.1\|3441444_3441786_-\|DUF2591-family-protein	gnl\|CDD\|107039	PHA01519, PHA01519, hypothetical protein.	2.58532e-46
NZ_CP024131.1\|WP_000723652.1\|3449990_3451043_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
NZ_CP024131.1\|WP_095762509.1\|3438998_3440081_+\|porin	gnl\|CDD\|182543	PRK10554, PRK10554, outer membrane porin protein C; Provisional.	7.01446e-163
NZ_CP024131.1\|WP_000604034.1\|3455250_3455940_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
NZ_CP024131.1\|WP_000533645.1\|3443315_3444386_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	3.41419e-62
NZ_CP024131.1\|WP_000113003.1\|3455939_3456713_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
NZ_CP024131.1\|WP_095762513.1\|3440875_3441238_-\|crossover-junction-endodeoxyribonuclease-RusA	gnl\|CDD\|182075	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed.	1.17043e-69
NZ_CP024131.1\|WP_000593906.1\|3446037_3448299_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
NZ_CP024131.1\|WP_000891669.1\|3454189_3455248_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP024131.1\|WP_000950954.1\|3441257_3441452_-\|protein-ninF	gnl\|CDD\|283468	pfam05810, NinF, NinF protein. This family consists of several bacteriophage NinF proteins as well as related sequences from E. coli.	0.000214139
NZ_CP024131.1\|WP_085947970.1\|3441951_3443165_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.46609e-155
NZ_CP024131.1\|WP_000891515.1\|3456878_3457028_-\|multidrug-efflux-pump-accessory-protein-AcrZ	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
NZ_CP024131.1\|WP_000679972.1\|3451226_3452180_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82

>NZ_CP024131.1|WP_001091569.1|3444520_3445804_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>NZ_CP024131.1|WP_000533645.1|3443315_3444386_+|tyrosine-type-recombinase/integrase
MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTTLHVDALGISMKETLDKCKKILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
>NZ_CP024131.1|WP_085947970.1|3441951_3443165_+|IS3-family-transposase
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKKLMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA
>NZ_CP024131.1|WP_000386643.1|3441444_3441786_-|DUF2591-family-protein
MDYSQLSDFEINRMVGDIIFKGLWASKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDPSASWPIIEKYRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLLMQEANNA
>NZ_CP024131.1|WP_000950954.1|3441257_3441452_-|protein-ninF
MLSPSQSLQYLKGSIERASMCTEWILSRFSAYRRLPVKGMPSKSMLHMQKNARWKVWREHRLSG
>NZ_CP024131.1|WP_095762513.1|3440875_3441238_-|crossover-junction-endodeoxyribonuclease-RusA
MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAILDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE
>NZ_CP024131.1|WP_032270810.1|3440738_3440879_-|YlcG-family-protein
MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKSYAKTLTGAGV
>NZ_CP024131.1|WP_001204774.1|3440269_3440653_-|antitermination-protein-QuuD
MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLIPSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYIVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN
>NZ_CP024131.1|WP_095762509.1|3438998_3440081_+|porin
MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKNDRNEVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVILGNNGLNASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLHSKGKDLGVWGDQDLVEYVDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF
>NZ_CP024131.1|WP_032192725.1|3438229_3438424_-|hypothetical-protein
MLKQLDMTETAKVVFNELNGKPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCYRRLQQ
>NZ_CP024131.1|WP_000593906.1|3446037_3448299_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>NZ_CP024131.1|WP_001036475.1|3448481_3449915_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>NZ_CP024131.1|WP_000723652.1|3449990_3451043_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>NZ_CP024131.1|WP_000679972.1|3451226_3452180_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>NZ_CP024131.1|WP_000815435.1|3452220_3453216_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>NZ_CP024131.1|WP_001300666.1|3453370_3454189_+|pyridoxal-phosphatase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>NZ_CP024131.1|WP_000891669.1|3454189_3455248_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKDICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>NZ_CP024131.1|WP_000604034.1|3455250_3455940_-|molybdate-ABC-transporter-permease-subunit
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>NZ_CP024131.1|WP_000113003.1|3455939_3456713_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>NZ_CP024131.1|WP_000891515.1|3456878_3457028_-|multidrug-efflux-pump-accessory-protein-AcrZ
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP024131_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_7

3689211-3689307

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_7

>merge|NZ_CP024131|7|3689211-3689307|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>NZ_CP024131|7|7|3689211-3689307|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_001143558.1\|3684119_3684641_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP024131.1\|WP_001459527.1\|3695411_3696647_+\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP024131.1\|WP_000580893.1\|3692325_3693993_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP024131.1\|WP_000495365.1\|3691056_3692316_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP024131.1\|WP_000729160.1\|3682931_3683798_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP024131.1\|WP_000190288.1\|3683799_3684012_+\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP024131.1\|WP_000540947.1\|3696657_3697443_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
NZ_CP024131.1\|WP_000212253.1\|3686732_3687455_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP024131.1\|WP_001306952.1\|3690230_3691046_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP024131.1\|WP_053887460.1\|3701616_3703071_-\|putative-allantoin-permease	unknown	unknown	gnl\|CDD\|183106
NZ_CP024131.1\|WP_000912345.1\|3684676_3686062_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP024131.1\|WP_001295318.1\|3687572_3688082_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP024131.1\|WP_000776555.1\|3681918_3682461_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_CP024131.1\|WP_001302767.1\|3698837_3700139_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP024131.1\|WP_000855384.1\|3689340_3690234_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP024131.1\|WP_000988364.1\|3681006_3681699_-\|type-1-fimbria-chaperone-FimC	unknown	unknown	gnl\|CDD\|185117
NZ_CP024131.1\|WP_101972994.1\|3700195_3701557_-\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_CP024131.1\|WP_000706344.1\|3697670_3698816_-\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
NZ_CP024131.1\|WP_000815566.1\|3688078_3689146_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP024131.1\|WP_000255997.1\|3686235_3686730_+\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_001143558.1\|3684119_3684641_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
NZ_CP024131.1\|WP_001459527.1\|3695411_3696647_+\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP024131.1\|WP_000580893.1\|3692325_3693993_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_CP024131.1\|WP_000495365.1\|3691056_3692316_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
NZ_CP024131.1\|WP_000729160.1\|3682931_3683798_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP024131.1\|WP_000190288.1\|3683799_3684012_+\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP024131.1\|WP_000540947.1\|3696657_3697443_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	3.35803e-151
NZ_CP024131.1\|WP_000212253.1\|3686732_3687455_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
NZ_CP024131.1\|WP_001306952.1\|3690230_3691046_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.28312e-37
NZ_CP024131.1\|WP_053887460.1\|3701616_3703071_-\|putative-allantoin-permease	gnl\|CDD\|183106	PRK11375, PRK11375, putative allantoin permease.	0
NZ_CP024131.1\|WP_000912345.1\|3684676_3686062_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP024131.1\|WP_001295318.1\|3687572_3688082_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP024131.1\|WP_000776555.1\|3681918_3682461_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
NZ_CP024131.1\|WP_001302767.1\|3698837_3700139_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP024131.1\|WP_000855384.1\|3689340_3690234_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP024131.1\|WP_000988364.1\|3681006_3681699_-\|type-1-fimbria-chaperone-FimC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
NZ_CP024131.1\|WP_101972994.1\|3700195_3701557_-\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_CP024131.1\|WP_000706344.1\|3697670_3698816_-\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
NZ_CP024131.1\|WP_000815566.1\|3688078_3689146_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
NZ_CP024131.1\|WP_000255997.1\|3686235_3686730_+\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121

>NZ_CP024131.1|WP_000815566.1|3688078_3689146_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP024131.1|WP_001295318.1|3687572_3688082_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP024131.1|WP_000212253.1|3686732_3687455_+|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP024131.1|WP_000255997.1|3686235_3686730_+|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP024131.1|WP_000912345.1|3684676_3686062_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP024131.1|WP_001143558.1|3684119_3684641_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_CP024131.1|WP_000190288.1|3683799_3684012_+|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP024131.1|WP_000729160.1|3682931_3683798_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP024131.1|WP_000776555.1|3681918_3682461_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP024131.1|WP_000988364.1|3681006_3681699_-|type-1-fimbria-chaperone-FimC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>NZ_CP024131.1|WP_000855384.1|3689340_3690234_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSGGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP024131.1|WP_001306952.1|3690230_3691046_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP024131.1|WP_000495365.1|3691056_3692316_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP024131.1|WP_000580893.1|3692325_3693993_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATSNDICVTIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLITDLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_CP024131.1|WP_001459527.1|3695411_3696647_+|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTLEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAILRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLAIMLYQLAWQK
>NZ_CP024131.1|WP_000540947.1|3696657_3697443_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNSWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP024131.1|WP_000706344.1|3697670_3698816_-|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDAHYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGETVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_CP024131.1|WP_001302767.1|3698837_3700139_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP024131.1|WP_101972994.1|3700195_3701557_-|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDVHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVASKGQFILKHQQ
>NZ_CP024131.1|WP_053887460.1|3701616_3703071_-|putative-allantoin-permease
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIATIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNAFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG

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Crispr_ID: NZ_CP024131_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_8

3899164-3899306

Orphan

Consensus_repeat	Method
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_8

>merge|NZ_CP024131|8|3899164-3899306|CRISPRCasFinder
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAGATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA

>NZ_CP024131|8|8|3899164-3899306|CRISPRCasFinder
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA	ATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAG
ATTCTCGCGCCACTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_000083429.1\|3899318_3900737_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP024131.1\|WP_001335745.1\|3911840_3912428_+\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP024131.1\|WP_000665120.1\|3896740_3898123_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|235873
NZ_CP024131.1\|WP_000111836.1\|3900736_3902284_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP024131.1\|WP_001424108.1\|3906379_3907468_-\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	unknown	unknown	gnl\|CDD\|214491
NZ_CP024131.1\|WP_001285927.1\|3888066_3889236_-\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
NZ_CP024131.1\|WP_001084399.1\|3905405_3906338_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182237
NZ_CP024131.1\|WP_087899328.1\|3907803_3909077_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|181829
NZ_CP024131.1\|WP_053887420.1\|3889675_3890566_-\|methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|183086
NZ_CP024131.1\|WP_000691956.1\|3892488_3892764_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|182151
NZ_CP024131.1\|WP_000131044.1\|3909678_3911712_-\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP024131.1\|WP_000661618.1\|3898132_3899083_-\|carbamate-kinase-family-protein	unknown	unknown	gnl\|CDD\|183464
NZ_CP024131.1\|WP_000983410.1\|3892910_3893582_+\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|273358
NZ_CP024131.1\|WP_000941041.1\|3890804_3892391_+\|propionate-catabolism-operon-regulatory-protein-PrpR	unknown	unknown	gnl\|CDD\|237963
NZ_CP024131.1\|WP_001459488.1\|3895314_3896364_-\|NADPH-dependent-aldehyde-reductase-YahK	unknown	unknown	gnl\|CDD\|176186
NZ_CP024131.1\|WP_001013892.1\|3904816_3905314_+\|DUF1097-domain-containing-protein	unknown	unknown	gnl\|CDD\|368942
NZ_CP024131.1\|WP_000290616.1\|3893598_3893844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024131.1\|WP_001299012.1\|3894256_3895072_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024131.1\|WP_000023635.1\|3903953_3904559_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP024131.1\|WP_120795374.1\|3909298_3909373_-\|protein-YahV	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_000083429.1\|3899318_3900737_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	4.07242e-115
NZ_CP024131.1\|WP_001335745.1\|3911840_3912428_+\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	1.29385e-111
NZ_CP024131.1\|WP_000665120.1\|3896740_3898123_-\|amidohydrolase-family-protein	gnl\|CDD\|235873	PRK06846, PRK06846, putative deaminase; Validated.	0
NZ_CP024131.1\|WP_000111836.1\|3900736_3902284_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	1.59666e-159
NZ_CP024131.1\|WP_001285927.1\|3888066_3889236_-\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
NZ_CP024131.1\|WP_001084399.1\|3905405_3906338_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182237	PRK10094, PRK10094, HTH-type transcriptional activator AllS.	2.76888e-81
NZ_CP024131.1\|WP_087899328.1\|3907803_3909077_-\|IS3-family-transposase	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0
NZ_CP024131.1\|WP_053887420.1\|3889675_3890566_-\|methylisocitrate-lyase	gnl\|CDD\|183086	PRK11320, prpB, 2-methylisocitrate lyase; Provisional.	0
NZ_CP024131.1\|WP_001459488.1\|3895314_3896364_-\|NADPH-dependent-aldehyde-reductase-YahK	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP024131.1\|WP_000131044.1\|3909678_3911712_-\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP024131.1\|WP_000661618.1\|3898132_3899083_-\|carbamate-kinase-family-protein	gnl\|CDD\|183464	PRK12352, PRK12352, putative carbamate kinase; Reviewed.	0
NZ_CP024131.1\|WP_000983410.1\|3892910_3893582_+\|LysE-family-transporter	gnl\|CDD\|273358	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein. [Transport and binding proteins, Amino acids, peptides and amines].	1.43641e-77
NZ_CP024131.1\|WP_000941041.1\|3890804_3892391_+\|propionate-catabolism-operon-regulatory-protein-PrpR	gnl\|CDD\|237963	PRK15424, PRK15424, propionate catabolism operon regulatory protein PrpR; Provisional.	0
NZ_CP024131.1\|WP_000691956.1\|3892488_3892764_-\|DUF1471-domain-containing-protein	gnl\|CDD\|182151	PRK09929, PRK09929, hypothetical protein; Provisional.	1.37929e-42
NZ_CP024131.1\|WP_001424108.1\|3906379_3907468_-\|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL	gnl\|CDD\|214491	smart00052, EAL, Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.	2.93271e-102
NZ_CP024131.1\|WP_000023635.1\|3903953_3904559_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	7.01906e-20
NZ_CP024131.1\|WP_001013892.1\|3904816_3905314_+\|DUF1097-domain-containing-protein	gnl\|CDD\|368942	pfam06496, DUF1097, Protein of unknown function (DUF1097). This family consists of several bacterial putative membrane proteins.	1.21804e-18

>NZ_CP024131.1|WP_000661618.1|3898132_3899083_-|carbamate-kinase-family-protein
MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIIITPECLPAALRGETGTHIIKT
>NZ_CP024131.1|WP_000665120.1|3896740_3898123_-|amidohydrolase-family-protein
MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG
>NZ_CP024131.1|WP_001459488.1|3895314_3896364_-|NADPH-dependent-aldehyde-reductase-YahK
MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHIGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD
>NZ_CP024131.1|WP_001299012.1|3894256_3895072_-|hypothetical-protein
MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFRILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEHHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNQWISNRVQELGDRYYPVNKHVKIRYTL
>NZ_CP024131.1|WP_000290616.1|3893598_3893844_-|hypothetical-protein
MAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGWGRPMKKAHTGESGLKWEAKDSSKLIGNKDHALRGLSSPMAVIRQIRLIT
>NZ_CP024131.1|WP_000983410.1|3892910_3893582_+|LysE-family-transporter
MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
>NZ_CP024131.1|WP_000691956.1|3892488_3892764_-|DUF1471-domain-containing-protein
MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK
>NZ_CP024131.1|WP_000941041.1|3890804_3892391_+|propionate-catabolism-operon-regulatory-protein-PrpR
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS
>NZ_CP024131.1|WP_053887420.1|3889675_3890566_-|methylisocitrate-lyase
MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNLLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFARSQVK
>NZ_CP024131.1|WP_001285927.1|3888066_3889236_-|2-methylcitrate-synthase
MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAKHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRPFVALDKRQ
>NZ_CP024131.1|WP_000083429.1|3899318_3900737_-|DUF1116-domain-containing-protein
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
>NZ_CP024131.1|WP_000111836.1|3900736_3902284_-|acyl-CoA-synthetase-FdrA
MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA
>NZ_CP024131.1|WP_000023635.1|3903953_3904559_-|ankyrin-repeat-domain-containing-protein
MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
>NZ_CP024131.1|WP_001013892.1|3904816_3905314_+|DUF1097-domain-containing-protein
MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGVISEYGGQKLSEATTKRDGY
>NZ_CP024131.1|WP_001084399.1|3905405_3906338_+|LysR-family-transcriptional-regulator
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
>NZ_CP024131.1|WP_001424108.1|3906379_3907468_-|DNA-binding-transcriptional-activator/c-di-GMP-phosphodiesterase-PdeL
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPMAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
>NZ_CP024131.1|WP_087899328.1|3907803_3909077_-|IS3-family-transposase
MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKTAVPPSKRAHTGKVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHWAVTTGGFDSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARILGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRASNGLSDNRCLEI
>NZ_CP024131.1|WP_120795374.1|3909298_3909373_-|protein-YahV
MCDILLNVLNIVFIGIAIILVIIC
>NZ_CP024131.1|WP_000131044.1|3909678_3911712_-|choline-BCCT-transporter-BetT
MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA
>NZ_CP024131.1|WP_001335745.1|3911840_3912428_+|transcriptional-regulator-BetI
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKPLDKTRANSLTRHFITQHLPTD

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Crispr_ID: NZ_CP024131_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_9

4185549-4185690

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_9

>merge|NZ_CP024131|9|4185549-4185690|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>NZ_CP024131|9|9|4185549-4185690|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_000347117.1\|4179905_4181048_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP024131.1\|WP_000349924.1\|4181176_4182394_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP024131.1\|WP_000543604.1\|4191219_4192041_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP024131.1\|WP_001295419.1\|4184129_4184915_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP024131.1\|WP_001166405.1\|4193187_4194138_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP024131.1\|WP_001286865.1\|4195207_4198024_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP024131.1\|WP_001612311.1\|4174825_4176112_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP024131.1\|WP_000203741.1\|4174541_4174829_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP024131.1\|WP_000351353.1\|4182467_4184021_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP024131.1\|WP_001091480.1\|4176162_4177104_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP024131.1\|WP_001300728.1\|4199015_4199234_-\|DUF2575-family-protein	unknown	unknown	gnl\|CDD\|287773
NZ_CP024131.1\|WP_001126349.1\|4186376_4189598_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP024131.1\|WP_000004655.1\|4194139_4194589_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP024131.1\|WP_001351917.1\|4189615_4190764_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP024131.1\|WP_000122884.1\|4184920_4185511_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP024131.1\|WP_000083369.1\|4194713_4195208_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_CP024131.1\|WP_000787103.1\|4178360_4179875_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP024131.1\|WP_001183198.1\|4173151_4174483_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP024131.1\|WP_000767329.1\|4198066_4199008_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP024131.1\|WP_000333125.1\|4185719_4186115_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_000347117.1\|4179905_4181048_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP024131.1\|WP_000349924.1\|4181176_4182394_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP024131.1\|WP_000543604.1\|4191219_4192041_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	8.28292e-142
NZ_CP024131.1\|WP_001295419.1\|4184129_4184915_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
NZ_CP024131.1\|WP_001166405.1\|4193187_4194138_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP024131.1\|WP_001286865.1\|4195207_4198024_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP024131.1\|WP_001612311.1\|4174825_4176112_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP024131.1\|WP_000203741.1\|4174541_4174829_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP024131.1\|WP_000351353.1\|4182467_4184021_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP024131.1\|WP_001091480.1\|4176162_4177104_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP024131.1\|WP_001300728.1\|4199015_4199234_-\|DUF2575-family-protein	gnl\|CDD\|287773	pfam10837, DUF2575, Protein of unknown function (DUF2575). This family of proteins appears to be restricted to Enterobacteriaceae. Members in the family are annotated as yaaY but currently there is no known function.	5.57075e-38
NZ_CP024131.1\|WP_001126349.1\|4186376_4189598_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP024131.1\|WP_000004655.1\|4194139_4194589_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
NZ_CP024131.1\|WP_001351917.1\|4189615_4190764_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP024131.1\|WP_000122884.1\|4184920_4185511_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	1.26584e-142
NZ_CP024131.1\|WP_000083369.1\|4194713_4195208_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	8.43095e-76
NZ_CP024131.1\|WP_000787103.1\|4178360_4179875_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP024131.1\|WP_001183198.1\|4173151_4174483_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.4298e-59
NZ_CP024131.1\|WP_000767329.1\|4198066_4199008_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.26241e-173
NZ_CP024131.1\|WP_000333125.1\|4185719_4186115_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74

>NZ_CP024131.1|WP_000122884.1|4184920_4185511_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP024131.1|WP_001295419.1|4184129_4184915_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP024131.1|WP_000351353.1|4182467_4184021_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNCPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP024131.1|WP_000349924.1|4181176_4182394_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKARETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP024131.1|WP_000347117.1|4179905_4181048_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP024131.1|WP_000787103.1|4178360_4179875_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP024131.1|WP_001091480.1|4176162_4177104_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP024131.1|WP_001612311.1|4174825_4176112_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGTACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP024131.1|WP_000203741.1|4174541_4174829_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP024131.1|WP_001183198.1|4173151_4174483_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>NZ_CP024131.1|WP_000333125.1|4185719_4186115_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP024131.1|WP_001126349.1|4186376_4189598_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP024131.1|WP_001351917.1|4189615_4190764_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEAILPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP024131.1|WP_000543604.1|4191219_4192041_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
>NZ_CP024131.1|WP_001166405.1|4193187_4194138_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKSAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>NZ_CP024131.1|WP_000004655.1|4194139_4194589_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>NZ_CP024131.1|WP_000083369.1|4194713_4195208_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>NZ_CP024131.1|WP_001286865.1|4195207_4198024_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILNAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTRDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>NZ_CP024131.1|WP_000767329.1|4198066_4199008_-|bifunctional-riboflavin-kinase/FAD-synthetase
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA
>NZ_CP024131.1|WP_001300728.1|4199015_4199234_-|DUF2575-family-protein
MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMKSHFFLISVLNRRLTLTAVQGILGRFSLF

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Crispr_ID: NZ_CP024131_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024131_10

4249661-4249816

Orphan

Consensus_repeat	Method
TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024131_10

>merge|NZ_CP024131|10|4249661-4249816|CRISPRCasFinder
TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAGACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA

>NZ_CP024131|10|10|4249661-4249816|CRISPRCasFinder
TGCGCCGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA	GACTTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATTG
TGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024131.1\|WP_000105851.1\|4241189_4242206_+\|lipoate--protein-ligase-LplA	unknown	unknown	gnl\|CDD\|179655
NZ_CP024131.1\|WP_000202563.1\|4253158_4254745_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP024131.1\|WP_015987614.1\|4255320_4255893_-\|cytolethal-distending-toxin-type-I-subunit-CdtC	unknown	unknown	gnl\|CDD\|367529
NZ_CP024131.1\|WP_000490275.1\|4251872_4252034_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP024131.1\|WP_101973021.1\|4243437_4244661_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP024131.1\|WP_122995517.1\|4257894_4257963_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367075
NZ_CP024131.1\|WP_000734593.1\|4255889_4256711_-\|cytolethal-distending-toxin-type-I-nuclease-subunit-CdtB	unknown	unknown	gnl\|CDD\|237931
NZ_CP024131.1\|WP_001295412.1\|4246161_4246941_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NZ_CP024131.1\|WP_000358619.1\|4256707_4257421_-\|cytolethal-distending-toxin-type-I-subunit-CdtA	unknown	unknown	gnl\|CDD\|367529
NZ_CP024131.1\|WP_001295748.1\|4252160_4252766_-\|molecular-chaperone-OsmY	unknown	unknown	gnl\|CDD\|182556
NZ_CP024131.1\|WP_000124615.1\|4240517_4241162_+\|YtjB-family-periplasmic-protein	unknown	unknown	gnl\|CDD\|236885
NZ_CP024131.1\|WP_001543400.1\|4250677_4251751_-\|patatin-family-protein	unknown	unknown	gnl\|CDD\|227013
NZ_CP024131.1\|WP_000563058.1\|4249898_4250681_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|171118
NZ_CP024131.1\|WP_000224879.1\|4242661_4243381_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP024131.1\|WP_001143237.1\|4247198_4248749_+\|YjjI-family-glycine-radical-enzyme	unknown	unknown	gnl\|CDD\|182879
NZ_CP024131.1\|WP_000566141.1\|4242237_4242501_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP024131.1\|WP_032200579.1\|4248720_4249584_+\|YjjW-family-glycine-radical-enzyme-activase	unknown	unknown	gnl\|CDD\|274938
NZ_CP024131.1\|WP_001217539.1\|4254964_4255213_+\|DinI-family-protein	unknown	unknown	gnl\|CDD\|182578
NZ_CP024131.1\|WP_001132956.1\|4239443_4240412_-\|phosphoserine-phosphatase	unknown	unknown	gnl\|CDD\|182988
NZ_CP024131.1\|WP_000477811.1\|4244712_4246035_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276

Protein	Function_ID	Function_description	E-value
NZ_CP024131.1\|WP_000105851.1\|4241189_4242206_+\|lipoate--protein-ligase-LplA	gnl\|CDD\|179655	PRK03822, lplA, lipoate-protein ligase A; Provisional.	0
NZ_CP024131.1\|WP_000202563.1\|4253158_4254745_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP024131.1\|WP_015987614.1\|4255320_4255893_-\|cytolethal-distending-toxin-type-I-subunit-CdtC	gnl\|CDD\|367529	pfam03498, CDtoxinA, Cytolethal distending toxin A/C domain.	3.3148e-41
NZ_CP024131.1\|WP_000490275.1\|4251872_4252034_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	4.97087e-08
NZ_CP024131.1\|WP_101973021.1\|4243437_4244661_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP024131.1\|WP_122995517.1\|4257894_4257963_-\|hypothetical-protein	gnl\|CDD\|367075	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK. This family contains bacterial and phage tail fibre assembly proteins. E.coli contains several members of this family although the function of these proteins is uncertain. Using the lambda phage members as examples, there are both gptfa and gpK tail proteins here. GpK forms part of the TTC or tail-tip complex that is located at the distal end of the tail. TTCs form the platform on which the tail-tube proteins self-assemble and are also the attachment point for fibers or receptor-binding proteins that mediate phage-adsorption to the surface of the host cell. TTC assembly starts with gpJ, which is also known as the central tail fibre and is involved in host-cell adsorption. It is the C-terminus of gpJ that interacts with the lamB receptor on host cells. A number of intermediates including gpK then interact with gpJ during tail morphogenesis.	7.00038e-06
NZ_CP024131.1\|WP_000734593.1\|4255889_4256711_-\|cytolethal-distending-toxin-type-I-nuclease-subunit-CdtB	gnl\|CDD\|237931	PRK15251, PRK15251, cytolethal distending toxin subunit B family protein.	2.37735e-153
NZ_CP024131.1\|WP_001295412.1\|4246161_4246941_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NZ_CP024131.1\|WP_000358619.1\|4256707_4257421_-\|cytolethal-distending-toxin-type-I-subunit-CdtA	gnl\|CDD\|367529	pfam03498, CDtoxinA, Cytolethal distending toxin A/C domain.	2.17431e-61
NZ_CP024131.1\|WP_001295748.1\|4252160_4252766_-\|molecular-chaperone-OsmY	gnl\|CDD\|182556	PRK10568, PRK10568, molecular chaperone OsmY.	4.36119e-102
NZ_CP024131.1\|WP_000124615.1\|4240517_4241162_+\|YtjB-family-periplasmic-protein	gnl\|CDD\|236885	PRK11246, PRK11246, YtjB family periplasmic protein.	1.17132e-151
NZ_CP024131.1\|WP_001543400.1\|4250677_4251751_-\|patatin-family-protein	gnl\|CDD\|227013	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	1.55464e-167
NZ_CP024131.1\|WP_000563058.1\|4249898_4250681_-\|metal-dependent-hydrolase	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	1.07007e-180
NZ_CP024131.1\|WP_000224879.1\|4242661_4243381_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.02509e-171
NZ_CP024131.1\|WP_001143237.1\|4247198_4248749_+\|YjjI-family-glycine-radical-enzyme	gnl\|CDD\|182879	PRK10977, PRK10977, hypothetical protein; Provisional.	0
NZ_CP024131.1\|WP_000566141.1\|4242237_4242501_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	0.000125672
NZ_CP024131.1\|WP_032200579.1\|4248720_4249584_+\|YjjW-family-glycine-radical-enzyme-activase	gnl\|CDD\|274938	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family. Members of this family are radical SAM enzymes, designated YjjW in E. coli, that are paired with and appear to activate a glycyl radical enzyme of unknown function, designated YjjI. This activase and its target are found in Clostridial species as well as E. coli and cousins. Members of this family may be misannotated as pyruvate formate lyase activating enzyme. [Protein fate, Protein modification and repair].	1.13282e-166
NZ_CP024131.1\|WP_001217539.1\|4254964_4255213_+\|DinI-family-protein	gnl\|CDD\|182578	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional.	2.86255e-16
NZ_CP024131.1\|WP_001132956.1\|4239443_4240412_-\|phosphoserine-phosphatase	gnl\|CDD\|182988	PRK11133, serB, phosphoserine phosphatase; Provisional.	0
NZ_CP024131.1\|WP_000477811.1\|4244712_4246035_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0

>NZ_CP024131.1|WP_032200579.1|4248720_4249584_+|YjjW-family-glycine-radical-enzyme-activase
MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEVLSHIRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSIYLLAERGKLAELRLLVIPGQVDYLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKMRGVSRLIFPALYL
>NZ_CP024131.1|WP_001143237.1|4247198_4248749_+|YjjI-family-glycine-radical-enzyme
MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
>NZ_CP024131.1|WP_001295412.1|4246161_4246941_-|deoxyribose-phosphate-aldolase
MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY
>NZ_CP024131.1|WP_000477811.1|4244712_4246035_-|thymidine-phosphorylase
MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE
>NZ_CP024131.1|WP_101973021.1|4243437_4244661_-|phosphopentomutase
MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFVDFDSFWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF
>NZ_CP024131.1|WP_000224879.1|4242661_4243381_-|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
>NZ_CP024131.1|WP_000566141.1|4242237_4242501_+|helix-turn-helix-transcriptional-regulator
MIDLENQEREIINLMFSQGISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSNIKSKMAEIYGCPSELLICPSWMTAEHK
>NZ_CP024131.1|WP_000105851.1|4241189_4242206_+|lipoate--protein-ligase-LplA
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSTWIAGAVR
>NZ_CP024131.1|WP_000124615.1|4240517_4241162_+|YtjB-family-periplasmic-protein
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
>NZ_CP024131.1|WP_001132956.1|4239443_4240412_-|phosphoserine-phosphatase
MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKTEVTIRHADLMGVFCILSGSLNQK
>NZ_CP024131.1|WP_000563058.1|4249898_4250681_-|metal-dependent-hydrolase
MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPCTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG
>NZ_CP024131.1|WP_001543400.1|4250677_4251751_-|patatin-family-protein
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRVPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
>NZ_CP024131.1|WP_000490275.1|4251872_4252034_-|DUF1328-domain-containing-protein
MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP
>NZ_CP024131.1|WP_001295748.1|4252160_4252766_-|molecular-chaperone-OsmY
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>NZ_CP024131.1|WP_000202563.1|4253158_4254745_-|peptide-chain-release-factor-3
MTSLLAAEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH
>NZ_CP024131.1|WP_001217539.1|4254964_4255213_+|DinI-family-protein
MRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH
>NZ_CP024131.1|WP_015987614.1|4255320_4255893_-|cytolethal-distending-toxin-type-I-subunit-CdtC
MKTVIVFFVLLLTGCASEPANQRNLLTQFVGNNAPVDPEPSPVLVNIRNVLTGGIIRNPVGSDFNVNNWVISEVKTNDLDLISAPGGHVQIKNPDGNECFAILNGQLAVAKQCSESDRNALFTFITSDTGAVQIKSIGSGQCLGNGESITDFRLKKCVDDLGRPFDTVPPGLLWMLNPPLSPAIMSPLTS
>NZ_CP024131.1|WP_000734593.1|4255889_4256711_-|cytolethal-distending-toxin-type-I-nuclease-subunit-CdtB
MKKLLFLLMILPGISFADLSDFKVATWNLQGSNAPTENKWNTHVRQLVTGSGAVDILMVQEAGAVPASATLTEREFSTPGIPMNEYIWNTGTNSRPQELFIYFSRVDAFANRVNLAIVSNRRADEVIVLPPPTVVSRPIIGIRIGNDVFFSTHALANRGVDSGAIVNSVFEFFNRQTDPIRQAANWMIAGDFNRSPATLFSTLEPGIRNHVNIIAPPDPTQASGGVLDYAVVGNSVSFVLPLLRASLLFGLLRGQIASDHFPVGFIPGRGARR
>NZ_CP024131.1|WP_000358619.1|4256707_4257421_-|cytolethal-distending-toxin-type-I-subunit-CdtA
MDKKLIAFLCTLIITGCSNGIGDSPSPPGKNVELVGIPGQGIAVTSNGATPTLGANNTEFPEVSIMSTGGALLTIWARPVRNWLWGYTPFDSVNFGENRNWKVVDGKDAGTVKFVNVAQGTCMEAFKNGVIHNTCDDNSLSQEFQLLPSTNGNVLIRSSALQTCIRADYLSRTILSPFAFTITLEKCPGAKEETQEMLWAISPPVRAAKPNLIKPELRPFRPLPIPPHDKPDGMEGV
>NZ_CP024131.1|WP_122995517.1|4257894_4257963_-|hypothetical-protein
MLLNRVDITTAPDIEWPTSPAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	74762-74793	0	1.0
NZ_CP024131_2	2.12\|1066104\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	72360-72391	0	1.0
NZ_CP024131_5	5.1\|3013228\|40\|NZ_CP024131\|CRISPRCasFinder	3013228-3013267	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194059-194101	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194245-194287	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204553-204595	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204739-204781	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195387-195429	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195573-195615	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176342-176384	0	1.0
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176528-176570	0	1.0
NZ_CP024131_2	2.17\|1066409\|32\|NZ_CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	1	0.969
NZ_CP024131_4	4.1\|2289998\|38\|NZ_CP024131\|CRISPRCasFinder	2289998-2290035	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194152-194194	2	0.953
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204646-204688	2	0.953
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195480-195522	2	0.953
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176435-176477	2	0.953
NZ_CP024131_1	1.12\|1036684\|32\|NZ_CP024131\|CRT	1036684-1036715	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
NZ_CP024131_1	1.12\|1036684\|32\|NZ_CP024131\|CRT	1036684-1036715	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
NZ_CP024131_1	1.12\|1036684\|32\|NZ_CP024131\|CRT	1036684-1036715	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
NZ_CP024131_10	10.1\|4249716\|46\|NZ_CP024131\|CRISPRCasFinder	4249716-4249761	46	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	69664-69709	3	0.935
NZ_CP024131_1	1.4\|1036683\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
NZ_CP024131_1	1.4\|1036683\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
NZ_CP024131_1	1.4\|1036683\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
NZ_CP024131_1	1.12\|1036684\|32\|NZ_CP024131\|CRT	1036684-1036715	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NC_014108	Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence	6021-6052	5	0.844
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP030922	Escherichia coli strain KL53 plasmid pKL53-S, complete sequence	5379-5410	5	0.844
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	372822-372853	5	0.844
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	MN699848	Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence	37054-37085	5	0.844
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6792-6834	5	0.884
NZ_CP024131_1	1.4\|1036683\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
NZ_CP024131_2	2.4\|1065616\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065616-1065647	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	43472-43503	6	0.812
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
NZ_CP024131_1	1.13\|1036745\|32\|NZ_CP024131\|CRT	1036745-1036776	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
NZ_CP024131_2	2.12\|1066104\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	MT446416	UNVERIFIED: Escherichia virus TH47, complete genome	160213-160244	7	0.781
NZ_CP024131_2	2.12\|1066104\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	KM507819	Escherichia phage 121Q, complete genome	77721-77752	7	0.781
NZ_CP024131_2	2.17\|1066409\|32\|NZ_CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	MK455769	Aeromonas phage MJG, complete genome	10369-10400	7	0.781
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40380-40422	7	0.837
NZ_CP024131_10	10.1\|4249716\|46\|NZ_CP024131\|CRISPRCasFinder	4249716-4249761	46	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	170812-170857	7	0.848
NZ_CP024131_1	1.5\|1036744\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036744-1036776	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP024131_1	1.13\|1036745\|32\|NZ_CP024131\|CRT	1036745-1036776	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
NZ_CP024131_1	1.16\|1036928\|32\|NZ_CP024131\|CRT	1036928-1036959	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
NZ_CP024131_2	2.3\|1065555\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065555-1065586	32	NC_018454	Cronobacter phage phiES15, complete genome	8781-8812	8	0.75
NZ_CP024131_2	2.3\|1065555\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065555-1065586	32	JQ780327	Cronobacter phage phiES15, complete sequence	8781-8812	8	0.75
NZ_CP024131_2	2.15\|1066287\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP013415	Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence	218852-218883	8	0.75
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194337-194379	8	0.814
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204831-204873	8	0.814
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195665-195707	8	0.814
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176620-176662	8	0.814
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313523-313565	8	0.814
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19340-19382	8	0.814
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
NZ_CP024131_1	1.11\|1036623\|32\|NZ_CP024131\|CRT	1036623-1036654	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
NZ_CP024131_2	2.5\|1065677\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	298003-298034	9	0.719
NZ_CP024131_2	2.5\|1065677\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	164238-164269	9	0.719
NZ_CP024131_2	2.5\|1065677\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	238009-238040	9	0.719
NZ_CP024131_2	2.5\|1065677\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065677-1065708	32	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	221025-221056	9	0.719
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	57083-57114	9	0.719
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	NZ_CP045296	Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence	238917-238948	9	0.719
NZ_CP024131_2	2.13\|1066165\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066165-1066196	32	AP014022	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, * SEQUENCING IN PROGRESS *	22698-22729	9	0.719
NZ_CP024131_2	2.13\|1066165\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066165-1066196	32	AP014023	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, * SEQUENCING IN PROGRESS *	23700-23731	9	0.719
NZ_CP024131_2	2.15\|1066287\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	208455-208486	9	0.719
NZ_CP024131_2	2.17\|1066409\|32\|NZ_CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	NC_047954	Pseudomonas phage Njord, complete genome	11435-11466	9	0.719
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211785-211827	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211985-212027	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222279-222321	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222479-222521	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213113-213155	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213313-213355	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194068-194110	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194268-194310	9	0.791
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	159956-159998	9	0.791
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
NZ_CP024131_10	10.1\|4249716\|46\|NZ_CP024131\|CRISPRCasFinder	4249716-4249761	46	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	21805-21850	9	0.804
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694016	Marine virus AFVG_250M811, complete genome	5413-5444	10	0.688
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694190	Marine virus AFVG_250M608, complete genome	5350-5381	10	0.688
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN693920	Marine virus AFVG_250M810, complete genome	5422-5453	10	0.688
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN693800	Marine virus AFVG_250M813, complete genome	5404-5435	10	0.688
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694355	Marine virus AFVG_250M627, complete genome	26040-26071	10	0.688
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694554	Marine virus AFVG_250M812, complete genome	5416-5447	10	0.688
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694404	Marine virus AFVG_250M623, complete genome	5369-5400	10	0.688
NZ_CP024131_1	1.12\|1036684\|32\|NZ_CP024131\|CRT	1036684-1036715	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
NZ_CP024131_1	1.12\|1036684\|32\|NZ_CP024131\|CRT	1036684-1036715	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
NZ_CP024131_2	2.2\|1065494\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065494-1065525	32	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	55281-55312	10	0.688
NZ_CP024131_2	2.4\|1065616\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065616-1065647	32	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	50199-50230	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	19612-19643	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	115804-115835	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	116173-116204	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	182725-182756	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	110105-110136	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	109122-109153	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	221496-221527	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	207469-207500	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	199664-199695	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	13581-13612	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	73431-73462	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	187798-187829	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	106322-106353	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	148086-148117	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	93116-93147	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	185318-185349	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	219648-219679	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	158306-158337	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	93116-93147	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	167798-167829	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_002305	Salmonella typhi plasmid R27, complete sequence	128806-128837	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	91681-91712	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	183046-183077	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	37794-37825	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	36345-36376	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	124973-125004	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	184389-184420	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	94449-94480	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	26677-26708	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	182833-182864	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	183156-183187	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	183101-183132	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	197454-197485	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	205427-205458	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	191663-191694	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	49708-49739	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	126184-126215	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	93117-93148	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	181554-181585	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	182609-182640	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	182936-182967	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	182844-182875	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	182670-182701	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	183046-183077	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	182572-182603	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	180358-180389	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	176026-176057	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	130052-130083	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	182677-182708	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	182461-182492	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	41577-41608	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	203153-203184	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	109234-109265	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	20553-20584	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	58755-58786	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	179219-179250	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	194749-194780	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	146284-146315	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	176467-176498	10	0.688
NZ_CP024131_2	2.6\|1065738\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065738-1065769	32	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	45801-45832	10	0.688
NZ_CP024131_2	2.8\|1065860\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065860-1065891	32	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	259269-259300	10	0.688
NZ_CP024131_2	2.12\|1066104\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066104-1066135	32	MF403008	Agrobacterium phage Atu_ph07, complete genome	280549-280580	10	0.688
NZ_CP024131_2	2.15\|1066287\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP041349	Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence	27173-27204	10	0.688
NZ_CP024131_2	2.15\|1066287\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP041350	Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence	149091-149122	10	0.688
NZ_CP024131_2	2.15\|1066287\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1066287-1066318	32	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	172655-172686	10	0.688
NZ_CP024131_2	2.17\|1066409\|32\|NZ_CP024131\|CRISPRCasFinder,CRT	1066409-1066440	32	NC_047894	Pseudomonas phage uligo, complete genome	11353-11384	10	0.688
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	93025-93067	10	0.767
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024831	Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence	200032-200074	10	0.767
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	26960-27002	10	0.767
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58221-58263	10	0.767
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
NZ_CP024131_9	9.1\|4185601\|38\|NZ_CP024131\|CRISPRCasFinder	4185601-4185638	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694016	Marine virus AFVG_250M811, complete genome	5413-5445	11	0.667
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694190	Marine virus AFVG_250M608, complete genome	5350-5382	11	0.667
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN693920	Marine virus AFVG_250M810, complete genome	5422-5454	11	0.667
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN693800	Marine virus AFVG_250M813, complete genome	5404-5436	11	0.667
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694554	Marine virus AFVG_250M812, complete genome	5416-5448	11	0.667
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694404	Marine virus AFVG_250M623, complete genome	5369-5401	11	0.667
NZ_CP024131_1	1.1\|1036500\|33\|NZ_CP024131\|CRISPRCasFinder	1036500-1036532	33	MN694355	Marine virus AFVG_250M627, complete genome	26039-26071	11	0.667
NZ_CP024131_1	1.4\|1036683\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_CP024131_1	1.4\|1036683\|33\|NZ_CP024131\|CRISPRCasFinder,PILER-CR	1036683-1036715	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694191	Marine virus AFVG_250M444, complete genome	10652-10683	11	0.656
NZ_CP024131_1	1.9\|1036501\|32\|NZ_CP024131\|CRT	1036501-1036532	32	MN694065	Marine virus AFVG_250M443, complete genome	44541-44572	11	0.656
NZ_CP024131_2	2.7\|1065799\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065799-1065830	32	MT344105	Acinetobacter phage fLi-Aba03, complete genome	32699-32730	11	0.656
NZ_CP024131_2	2.7\|1065799\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065799-1065830	32	MT344104	Acinetobacter phage fLi-Aba02, complete genome	32861-32892	11	0.656
NZ_CP024131_2	2.7\|1065799\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065799-1065830	32	MT344103	Acinetobacter phage fEg-Aba01, complete genome	31614-31645	11	0.656
NZ_CP024131_2	2.10\|1065982\|32\|NZ_CP024131\|PILER-CR,CRISPRCasFinder,CRT	1065982-1066013	32	MN694507	Marine virus AFVG_250M1178, complete genome	3229-3260	11	0.656
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	32769-32811	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	32768-32810	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	32767-32809	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_KX928752	Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence	211544-211586	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	AP018456	Escherichia coli O25b:H4-ST131 plasmid pMRY09-581ECO_1 MRY09-581 DNA, complete sequence	156465-156507	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	AP018457	Escherichia coli O25b:H4-ST131 plasmid pMRY09-592ECO_1 MRY09-592 DNA, complete sequence	83219-83261	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	AP018458	Escherichia coli O25b:H4-ST131 plasmid pMRY09-597ECO_1 MRY09-597 DNA, complete sequence	112388-112430	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP015070	Escherichia coli strain Ecol_743 plasmid pEC743_1, complete sequence	11834-11876	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	145303-145345	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	AP019526	Escherichia coli O25b:H4-ST131 B0018 plasmid pB0018 DNA, complete sequence	87746-87788	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP041338	Escherichia coli strain CCUG 73778 plasmid pSUH-1, complete sequence	32482-32524	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP035517	Escherichia coli strain U14A plasmid pU14A_A, complete sequence	40478-40520	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP028484	Escherichia coli strain E41-1 plasmid p1, complete sequence	72478-72520	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP035478	Escherichia coli strain U13A plasmid pU13A_A, complete sequence	84519-84561	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_LS992186	Escherichia coli isolate Escherichia coli str. 3426 plasmid 2, complete sequence	55760-55802	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP054941	Escherichia coli strain MS6192 plasmid pMS6192A-NDM, complete sequence	119078-119120	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP012683	Salmonella enterica subsp. enterica serovar Typhimurium strain 33676 plasmid p33673_IncF, complete sequence	28669-28711	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP036244	Escherichia coli strain S65EC plasmid pS65EC, complete sequence	10369-10411	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP045279	Escherichia coli strain LAU-OXA plasmid pLAU-OXA2, complete sequence	78866-78908	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP023845	Escherichia coli strain 4/1-1 plasmid p4_1_1.1, complete sequence	89391-89433	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP021180	Escherichia coli strain 81009 plasmid pEC-81009, complete sequence	54708-54750	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP029580	Escherichia coli strain DA33137 plasmid pDA33137-178, complete sequence	39703-39745	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP014498	Escherichia coli strain ZH193 plasmid pZH193, complete sequence	79087-79129	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP010882	Escherichia coli strain MNCRE44 plasmid pMNCRE44_6, complete sequence	121751-121793	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024831	Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence	23769-23811	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP032202	Escherichia coli strain AR_0086 plasmid unnamed1, complete sequence	97360-97402	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP009233	Escherichia coli strain CA08 plasmid pCA08, complete sequence	137134-137176	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP035468	Escherichia coli strain U12A plasmid pU12A_A, complete sequence	84519-84561	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP021690	Escherichia coli strain AR_0058 plasmid tig00007555j7554, complete sequence	48062-48104	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024816	Escherichia coli strain CREC-629 plasmid pCREC-629_1, complete sequence	64633-64675	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP024039	Klebsiella pneumoniae strain QS17-0029 plasmid pMR0617ndm, complete sequence	23219-23261	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	CP042900	Escherichia coli strain CFSAN061763 plasmid pCFSAN061763, complete sequence	86160-86202	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018982	Escherichia coli strain Ecol_867 plasmid pEC867_1, complete sequence	99183-99225	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018952	Escherichia coli strain Ecol_276 plasmid pEC276_1, complete sequence	36755-36797	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018998	Escherichia coli strain Ecol_AZ153 plasmid pECAZ153_2, complete sequence	68008-68050	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	CP042902	Escherichia coli strain CFSAN061762 plasmid pCFSAN061762, complete sequence	98568-98610	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018207	Escherichia coli strain MRSN346647 plasmid pMRSN346647_113.1, complete sequence	59279-59321	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	CP042974	Escherichia coli strain CFSAN061768 plasmid pCFSAN061768, complete sequence	39014-39056	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP015140	Escherichia coli strain Ecol_732 plasmid pEC732_2, complete sequence	61740-61782	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018947	Escherichia coli strain Ecol_224 plasmid pEC224_1, complete sequence	119757-119799	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018969	Escherichia coli strain Ecol_542 plasmid pEC542_1, complete sequence	57608-57650	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_LS992169	Escherichia coli isolate Escherichia coli str. TO60 plasmid 2, complete sequence	125523-125565	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP019028	Escherichia coli strain Ecol_881 plasmid pEC881_1, complete sequence	90988-91030	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP043407	Escherichia coli strain NMBU-W13E19 plasmid pNMBU-W13E19_01, complete sequence	118796-118838	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP047406	Escherichia coli strain MS6193 plasmid pMS6193A-NDM, complete sequence	119082-119124	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP025708	Escherichia coli strain YDC107 plasmid pYDC107_184, complete sequence	180971-181013	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP021871	Escherichia coli strain H105 plasmid pH105, complete sequence	120901-120943	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP015914	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy2, complete sequence	101326-101368	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP028576	Escherichia coli strain WCHEC005784 plasmid pCTXM15_005784, complete sequence	109106-109148	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP032258	Escherichia coli strain AR_0067 plasmid unnamed1, complete sequence	54456-54498	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP040070	Escherichia coli strain A1_181 plasmid p_unnamed3, complete sequence	79588-79630	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	AP022357	Escherichia coli E119 plasmid pE119_6kIMP6 DNA, complete sequence	64419-64461	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	AP022359	Escherichia coli E294 plasmid pE294_IMP6 DNA, complete sequence	3275-3317	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520279	Escherichia coli H0063 plasmid pH0063 DNA, complete sequence	107743-107785	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520280	Escherichia coli H0106 plasmid pH0106 DNA, complete sequence	115453-115495	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520281	Escherichia coli H0130 plasmid pH0130 DNA, complete sequence	17725-17767	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520282	Escherichia coli I0082 plasmid pI0082 DNA, complete sequence	85078-85120	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520283	Escherichia coli I0128 plasmid pI0128 DNA, complete sequence	127163-127205	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520284	Escherichia coli HP003 plasmid pHP003 DNA, complete sequence	121280-121322	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520285	Escherichia coli HP030 plasmid pHP030 DNA, complete sequence	131592-131634	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520286	Escherichia coli HP050 plasmid pHP050 DNA, complete sequence	114287-114329	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520287	Escherichia coli HP129 plasmid pHP129 DNA, complete sequence	132312-132354	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520288	Escherichia coli HP223 plasmid pHP223 DNA, complete sequence	99279-99321	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520289	Escherichia coli HP243 plasmid pHP243 DNA, complete sequence	95600-95642	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NC_013951	Klebsiella pneumoniae plasmid pKF3-140, complete sequence	141278-141320	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520268	Escherichia coli C0044 plasmid pC0044 DNA, complete sequence	80110-80152	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520269	Escherichia coli A0084 plasmid pA0084 DNA, complete sequence	123544-123586	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520270	Escherichia coli A0086 plasmid pA0086 DNA, complete sequence	131526-131568	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520271	Escherichia coli A0140 plasmid pA0140 DNA, complete sequence	116903-116945	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520272	Escherichia coli A0145 plasmid pA0145 DNA, complete sequence	17168-17210	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520273	Escherichia coli A0150 plasmid pA0150 DNA, complete sequence	123569-123611	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520274	Escherichia coli C0079 plasmid pC0079 DNA, complete sequence	71030-71072	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520275	Escherichia coli C0122 plasmid pC0122 DNA, complete sequence	17725-17767	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520276	Escherichia coli F0090 plasmid pF0090 DNA, complete sequence	92540-92582	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520277	Escherichia coli G0138 plasmid pG0138 DNA, complete sequence	91912-91954	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	LC520278	Escherichia coli H0005 plasmid pH0005 DNA, complete sequence	100643-100685	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP018105	Escherichia coli strain MRSN352231 plasmid pMR0716_PSE, complete sequence	48100-48142	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NC_010558	Escherichia coli plasmid pIP1206, complete sequence	144305-144347	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP033847	Escherichia coli strain FDAARGOS_497 plasmid unnamed1, complete sequence	82773-82815	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP019009	Escherichia coli strain Ecol_AZ161 plasmid pECAZ161_3, complete sequence	101870-101912	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295824	Escherichia coli O25b:H4-ST131 strain 26 plasmid p26, complete sequence	90553-90595	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295827	Escherichia coli O25b:H4-ST131 strain U17 plasmid pU17, complete sequence	73251-73293	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295828	Escherichia coli O25b:H4-ST131 strain U23 plasmid pU23, complete sequence	104606-104648	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295829	Escherichia coli O25b:H4-ST131 strain 13.1 plasmid p131, complete sequence	130573-130615	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295830	Escherichia coli O25b:H4-ST131 strain 425 plasmid p425, complete sequence	118277-118319	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295832	Escherichia coli O25b:H4-ST131 strain B14 plasmid pB14, complete sequence	89991-90033	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295834	Escherichia coli O25b:H4-ST131 strain 56 plasmid p56, complete sequence	93424-93466	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295817	Escherichia coli O25b:H4-ST131 strain B9 plasmid pB9, complete sequence	101374-101416	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	MK295819	Escherichia coli O25b:H4-ST131 strain U10 plasmid pU10, complete sequence	99628-99670	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_MH523448	Klebsiella pneumoniae strain KL8 plasmid pKL8-NDM, complete sequence	73526-73568	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_MG886288	Escherichia coli strain MO plasmid pMO, complete sequence	69930-69972	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_MG836696	Escherichia coli strain 2248 plasmid pCTXM-2248, complete sequence	3595-3637	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP029422	Escherichia coli strain 3385 plasmid unnamed2, complete sequence	20653-20695	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_LC492469	Escherichia coli strain M216 plasmid pM216_mF, complete sequence	123757-123799	11	0.744
NZ_CP024131_8	8.1\|3899214\|43\|NZ_CP024131\|CRISPRCasFinder	3899214-3899256	43	NZ_CP023827	Escherichia coli strain 4/4 plasmid p4_4.1, complete sequence	51929-51971	11	0.744

1. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggggaaaacgaacaatctgttt	Protospacer
********************************

2. spacer 2.12|1066104|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 0, identity: 1.0

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
actgcaaagttcttcacgctggtttttatgca	Protospacer
********************************

3. spacer 5.1|3013228|40|NZ_CP024131|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

4. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

5. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

6. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

7. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

8. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

9. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

10. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

11. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 0, identity: 1.0

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
*******************************************

12. spacer 2.17|1066409|32|NZ_CP024131|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

13. spacer 4.1|2289998|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

14. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

15. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

16. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

17. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 2, identity: 0.953

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gtggtggcaaatgcctgatgcgctacgcttatcaggcctacag	Protospacer
.*****.************************************

18. spacer 1.12|1036684|32|NZ_CP024131|CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

19. spacer 1.12|1036684|32|NZ_CP024131|CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

20. spacer 1.12|1036684|32|NZ_CP024131|CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

21. spacer 10.1|4249716|46|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.935

gacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattg	CRISPR spacer
aacctgtaggcatgataagacgcgacaagcgtcgcatcaggcatta	Protospacer
.**.*****************************************.

22. spacer 1.4|1036683|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

23. spacer 1.4|1036683|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

24. spacer 1.4|1036683|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

25. spacer 1.12|1036684|32|NZ_CP024131|CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

26. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_014108 (Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_B, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

27. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

28. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

29. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 5, identity: 0.844

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tcatgaatatggcgaaaatgaacaatcagcct	Protospacer
************ *****.******** *..*

30. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 5, identity: 0.884

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-cggtgccaaattgcctgatgcgcttcgcttatcaggcctacat	Protospacer
 .**** **** ************* *****************

31. spacer 1.4|1036683|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

32. spacer 2.4|1065616|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgagtccgtcagcggtgcgccgctg-caaca	CRISPR spacer
gtcgagtaagtcagcggtgcgccgcgatcaac-	Protospacer
* *****  **************** . ****

33. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

34. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

35. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

36. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

37. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

38. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

39. spacer 1.13|1036745|32|NZ_CP024131|CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

40. spacer 2.12|1066104|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT446416 (UNVERIFIED: Escherichia virus TH47, complete genome) position: , mismatch: 7, identity: 0.781

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

41. spacer 2.12|1066104|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 7, identity: 0.781

actgcaaagttcttcacgctggtt-----tttatgca	CRISPR spacer
actgcaaagttcttcaagctgtttagctgttt-----	Protospacer
**************** **** **     ***

42. spacer 2.17|1066409|32|NZ_CP024131|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

43. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 7, identity: 0.837

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaaggtaaaattgcctgatgcgctacgcttatcaggcctacat	Protospacer
* .*  * ** *******************************

44. spacer 10.1|4249716|46|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.848

gacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattg	CRISPR spacer
gttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacc	Protospacer
* .******** ************.****************** .

45. spacer 1.5|1036744|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

46. spacer 1.13|1036745|32|NZ_CP024131|CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

47. spacer 1.16|1036928|32|NZ_CP024131|CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

48. spacer 2.3|1065555|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_018454 (Cronobacter phage phiES15, complete genome) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

49. spacer 2.3|1065555|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to JQ780327 (Cronobacter phage phiES15, complete sequence) position: , mismatch: 8, identity: 0.75

atccgccgccggttaacgctggaccagttccg	CRISPR spacer
gcgtggccccggttaacgctggacacgttccg	Protospacer
.. .* * ****************  ******

50. spacer 2.15|1066287|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013415 (Burkholderia ubonensis strain MSMB2035 plasmid pMSMB2035, complete sequence) position: , mismatch: 8, identity: 0.75

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
aatctacaggccgtgacggttgtcatggaggc	Protospacer
     *****************.*** *** *

51. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

52. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

53. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

54. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

55. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaacgcaaaattgcctgatgcgctgcgcttatcaggcctacag	Protospacer
* .   * ** *************.******************

56. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 8, identity: 0.814

atggtgacaaa-tgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
-caacgccagactgcctgatgcgctacgcttatcaggcctacaa	Protospacer
 ....* **.* *******************************.

57. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

58. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

59. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

60. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

61. spacer 1.11|1036623|32|NZ_CP024131|CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
gaaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
* ********  *************..*  .

62. spacer 2.5|1065677|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

63. spacer 2.5|1065677|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

64. spacer 2.5|1065677|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

65. spacer 2.5|1065677|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ggacaatgtgaaaagcttaatattcattacat	CRISPR spacer
aaggaaaatgaaaagaataatattcattacag	Protospacer
... ** .*******  **************

66. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatatcacccagcactccggg	Protospacer
  *  ******************** ** .

67. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
tctgctgcatgggggaaacgatcaatctgttg	Protospacer
**    ..******.****** *********

68. spacer 2.13|1066165|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to AP014022 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S32-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccttggag	Protospacer
******.***** ***********.*    .

69. spacer 2.13|1066165|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to AP014023 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C112A-MedDCM-OCT-S35-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccagccgaaacaacgccagcaaaatcgaccgc	CRISPR spacer
ccagccaaaacatcgccagcaaaaccctggag	Protospacer
******.***** ***********.*    .

70. spacer 2.15|1066287|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gctgcacagggtgtgacggttgccattgccga	Protospacer
 * * ***** .****************

71. spacer 2.17|1066409|32|NZ_CP024131|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

72. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

73. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

74. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

75. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

76. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

77. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

78. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

79. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcggctggaattgcctgatgcgctacgcttatcaggcctacga	Protospacer
..**. . ** ******************************..

80. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 9, identity: 0.791

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gcaggaagcattgcctgatgcgctacgcttatcaggcctacaa	Protospacer
...* .*  * *******************************.

81. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

82. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

83. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

84. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

85. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

86. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

87. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

88. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

89. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

90. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

91. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

92. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

93. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

94. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

95. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

96. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

97. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

98. spacer 10.1|4249716|46|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.804

gacttgtaggcatgataagacgcgacaagcgtcgcatcaggcattg	CRISPR spacer
tcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttca	Protospacer
  *. *******************..**************** *..

99. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

100. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatacct	Protospacer
.  .*********.***********.**.

101. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

102. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

103. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

104. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatactt	Protospacer
.  .*********.***********.**.

105. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 10, identity: 0.688

cggcccataatattaatataatccacatgagg	CRISPR spacer
tcttccataatatcaatataatccatatacct	Protospacer
.  .*********.***********.**.

106. spacer 1.12|1036684|32|NZ_CP024131|CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

107. spacer 1.12|1036684|32|NZ_CP024131|CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

108. spacer 2.2|1065494|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggaattgttatgctgttcccctgaccg	CRISPR spacer
tcttcggaattgccatgctgttccccttccat	Protospacer
  . ********..*************  *

109. spacer 2.4|1065616|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcgagtccgtcagcggtgcgccgctgcaaca	CRISPR spacer
ttggagtccgacatcggtgcgccgcttttcga	Protospacer
   ******* ** ************ .   *

110. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

111. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

112. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

113. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

114. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

115. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

116. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

117. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

118. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

119. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

120. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

121. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

122. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

123. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

124. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

125. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

126. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

127. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

128. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

129. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

130. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

131. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

132. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

133. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

134. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

135. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

136. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

137. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

138. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

139. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

140. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

141. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

142. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

143. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

144. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

145. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

146. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

147. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

148. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

149. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

150. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

151. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

152. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

153. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

154. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

155. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

156. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

157. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

158. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

159. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

160. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

161. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

162. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

163. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

164. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

165. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

166. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

167. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

168. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

169. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

170. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

171. spacer 2.6|1065738|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 10, identity: 0.688

cgacgttttctaatatcacccagcaatcaatt	CRISPR spacer
gtaacttttctaatctcacccagcactccggg	Protospacer
  *  ********* ********** ** .

172. spacer 2.8|1065860|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.688

tcatgaatatggggaaaacgaacaatctgttt	CRISPR spacer
agctgaatatggggaaaatgcacaatatcccc	Protospacer
   ***************.* ***** * ...

173. spacer 2.12|1066104|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 10, identity: 0.688

actgcaaagttcttcacgctggtttttatgca	CRISPR spacer
cataagaagtgcttcacgctggttttcatcag	Protospacer
  *. .**** ***************.**  .

174. spacer 2.15|1066287|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041349 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gacggacaggccgccacggttgccatcaggaa	Protospacer
   **********. ***********...*

175. spacer 2.15|1066287|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

176. spacer 2.15|1066287|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 10, identity: 0.688

ccaggacaggccgtgacggttgccattgagtc	CRISPR spacer
gatggacaggctgtgacggtcgccatcaggaa	Protospacer
   ********.********.*****...*

177. spacer 2.17|1066409|32|NZ_CP024131|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

178. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaaaacgtagttgcctgatgcgctacgcttatcaggcctacat	Protospacer
* ..  ..*. *******************************

179. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP024831 (Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
gccatccgcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
.. .*    ***************.*****************.

180. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
aaacgcaaagctgcctgatgcgctacgcttatcagacctacat	Protospacer
* .   * *. ************************.******

181. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.767

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
tttgataccgttgcctgatgcgcttcgcttatcaggtctacaa	Protospacer
 * *  ** . ************* ***********.*****.

182. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

183. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

184. spacer 9.1|4185601|38|NZ_CP024131|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

185. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN694016 (Marine virus AFVG_250M811, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

186. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

187. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN693920 (Marine virus AFVG_250M810, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

188. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN693800 (Marine virus AFVG_250M813, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

189. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN694554 (Marine virus AFVG_250M812, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

190. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN694404 (Marine virus AFVG_250M623, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatacct	Protospacer
 .  .*********.***********.**.

191. spacer 1.1|1036500|33|NZ_CP024131|CRISPRCasFinder matches to MN694355 (Marine virus AFVG_250M627, complete genome) position: , mismatch: 11, identity: 0.667

gcggcccataatattaatataatccacatgagg	CRISPR spacer
ttcttccataatatcaatataatccatatactt	Protospacer
 .  .*********.***********.**.

192. spacer 1.4|1036683|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

193. spacer 1.4|1036683|33|NZ_CP024131|CRISPRCasFinder,PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

194. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694191 (Marine virus AFVG_250M444, complete genome) position: , mismatch: 11, identity: 0.656

cggcccataatattaatataatccacatgagg	CRISPR spacer
gttaatgtaatattattataatcaacatgacc	Protospacer
     ..******** ******* ******

195. spacer 1.9|1036501|32|NZ_CP024131|CRT matches to MN694065 (Marine virus AFVG_250M443, complete genome) position: , mismatch: 11, identity: 0.656

cggcccataatattaatataatccacatgagg	CRISPR spacer
gttaatgtaatattattataatcaacatgacc	Protospacer
     ..******** ******* ******

196. spacer 2.7|1065799|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT344105 (Acinetobacter phage fLi-Aba03, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

197. spacer 2.7|1065799|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT344104 (Acinetobacter phage fLi-Aba02, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

198. spacer 2.7|1065799|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MT344103 (Acinetobacter phage fEg-Aba01, complete genome) position: , mismatch: 11, identity: 0.656

atttcatcaaagcattaagggatggaataaag	CRISPR spacer
ctttcatcaaagtattaatggatgatggttca	Protospacer
 ***********.***** *****. .    .

199. spacer 2.10|1065982|32|NZ_CP024131|PILER-CR,CRISPRCasFinder,CRT matches to MN694507 (Marine virus AFVG_250M1178, complete genome) position: , mismatch: 11, identity: 0.656

aaccttgtcgggtcgcccgtgcgtcatgatga	CRISPR spacer
tggtatgtcgggtagcccgtgcgccatgcccg	Protospacer
 . . ******** *********.**** . .

200. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

201. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

202. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

203. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_KX928752 (Klebsiella pneumoniae strain CRKP-59-KPC plasmid pCRKP-59-KPC, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

204. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to AP018456 (Escherichia coli O25b:H4-ST131 plasmid pMRY09-581ECO_1 MRY09-581 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

205. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to AP018457 (Escherichia coli O25b:H4-ST131 plasmid pMRY09-592ECO_1 MRY09-592 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

206. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to AP018458 (Escherichia coli O25b:H4-ST131 plasmid pMRY09-597ECO_1 MRY09-597 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

207. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP015070 (Escherichia coli strain Ecol_743 plasmid pEC743_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

208. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

209. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to AP019526 (Escherichia coli O25b:H4-ST131 B0018 plasmid pB0018 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

210. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP041338 (Escherichia coli strain CCUG 73778 plasmid pSUH-1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

211. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP035517 (Escherichia coli strain U14A plasmid pU14A_A, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

212. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP028484 (Escherichia coli strain E41-1 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

213. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP035478 (Escherichia coli strain U13A plasmid pU13A_A, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

214. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_LS992186 (Escherichia coli isolate Escherichia coli str. 3426 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

215. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP054941 (Escherichia coli strain MS6192 plasmid pMS6192A-NDM, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

216. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP012683 (Salmonella enterica subsp. enterica serovar Typhimurium strain 33676 plasmid p33673_IncF, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

217. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP036244 (Escherichia coli strain S65EC plasmid pS65EC, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

218. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP045279 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

219. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP023845 (Escherichia coli strain 4/1-1 plasmid p4_1_1.1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

220. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP021180 (Escherichia coli strain 81009 plasmid pEC-81009, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

221. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP029580 (Escherichia coli strain DA33137 plasmid pDA33137-178, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

222. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP014498 (Escherichia coli strain ZH193 plasmid pZH193, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

223. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP010882 (Escherichia coli strain MNCRE44 plasmid pMNCRE44_6, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

224. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP024831 (Escherichia coli strain CREC-532 plasmid pCREC-532_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

225. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP032202 (Escherichia coli strain AR_0086 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

226. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP009233 (Escherichia coli strain CA08 plasmid pCA08, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

227. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP035468 (Escherichia coli strain U12A plasmid pU12A_A, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

228. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP021690 (Escherichia coli strain AR_0058 plasmid tig00007555j7554, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

229. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP024816 (Escherichia coli strain CREC-629 plasmid pCREC-629_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

230. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP024039 (Klebsiella pneumoniae strain QS17-0029 plasmid pMR0617ndm, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

231. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to CP042900 (Escherichia coli strain CFSAN061763 plasmid pCFSAN061763, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

232. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018982 (Escherichia coli strain Ecol_867 plasmid pEC867_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

233. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018952 (Escherichia coli strain Ecol_276 plasmid pEC276_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

234. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018998 (Escherichia coli strain Ecol_AZ153 plasmid pECAZ153_2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

235. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to CP042902 (Escherichia coli strain CFSAN061762 plasmid pCFSAN061762, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

236. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018207 (Escherichia coli strain MRSN346647 plasmid pMRSN346647_113.1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

237. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to CP042974 (Escherichia coli strain CFSAN061768 plasmid pCFSAN061768, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

238. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP015140 (Escherichia coli strain Ecol_732 plasmid pEC732_2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

239. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018947 (Escherichia coli strain Ecol_224 plasmid pEC224_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

240. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018969 (Escherichia coli strain Ecol_542 plasmid pEC542_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

241. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_LS992169 (Escherichia coli isolate Escherichia coli str. TO60 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

242. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP019028 (Escherichia coli strain Ecol_881 plasmid pEC881_1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

243. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP043407 (Escherichia coli strain NMBU-W13E19 plasmid pNMBU-W13E19_01, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

244. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP047406 (Escherichia coli strain MS6193 plasmid pMS6193A-NDM, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

245. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP025708 (Escherichia coli strain YDC107 plasmid pYDC107_184, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

246. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP021871 (Escherichia coli strain H105 plasmid pH105, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

247. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP015914 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

248. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP028576 (Escherichia coli strain WCHEC005784 plasmid pCTXM15_005784, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

249. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP032258 (Escherichia coli strain AR_0067 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

250. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP040070 (Escherichia coli strain A1_181 plasmid p_unnamed3, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

251. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to AP022357 (Escherichia coli E119 plasmid pE119_6kIMP6 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

252. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to AP022359 (Escherichia coli E294 plasmid pE294_IMP6 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

253. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520279 (Escherichia coli H0063 plasmid pH0063 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

254. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520280 (Escherichia coli H0106 plasmid pH0106 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

255. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520281 (Escherichia coli H0130 plasmid pH0130 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

256. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520282 (Escherichia coli I0082 plasmid pI0082 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

257. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520283 (Escherichia coli I0128 plasmid pI0128 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

258. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520284 (Escherichia coli HP003 plasmid pHP003 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

259. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520285 (Escherichia coli HP030 plasmid pHP030 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

260. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520286 (Escherichia coli HP050 plasmid pHP050 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

261. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520287 (Escherichia coli HP129 plasmid pHP129 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

262. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520288 (Escherichia coli HP223 plasmid pHP223 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

263. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520289 (Escherichia coli HP243 plasmid pHP243 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

264. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NC_013951 (Klebsiella pneumoniae plasmid pKF3-140, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

265. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520268 (Escherichia coli C0044 plasmid pC0044 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

266. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520269 (Escherichia coli A0084 plasmid pA0084 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

267. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520270 (Escherichia coli A0086 plasmid pA0086 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

268. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520271 (Escherichia coli A0140 plasmid pA0140 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

269. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520272 (Escherichia coli A0145 plasmid pA0145 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

270. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520273 (Escherichia coli A0150 plasmid pA0150 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

271. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520274 (Escherichia coli C0079 plasmid pC0079 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

272. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520275 (Escherichia coli C0122 plasmid pC0122 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

273. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520276 (Escherichia coli F0090 plasmid pF0090 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

274. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520277 (Escherichia coli G0138 plasmid pG0138 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

275. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to LC520278 (Escherichia coli H0005 plasmid pH0005 DNA, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

276. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP018105 (Escherichia coli strain MRSN352231 plasmid pMR0716_PSE, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

277. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NC_010558 (Escherichia coli plasmid pIP1206, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

278. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP033847 (Escherichia coli strain FDAARGOS_497 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

279. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP019009 (Escherichia coli strain Ecol_AZ161 plasmid pECAZ161_3, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

280. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295824 (Escherichia coli O25b:H4-ST131 strain 26 plasmid p26, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

281. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295827 (Escherichia coli O25b:H4-ST131 strain U17 plasmid pU17, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

282. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295828 (Escherichia coli O25b:H4-ST131 strain U23 plasmid pU23, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

283. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295829 (Escherichia coli O25b:H4-ST131 strain 13.1 plasmid p131, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

284. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295830 (Escherichia coli O25b:H4-ST131 strain 425 plasmid p425, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

285. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295832 (Escherichia coli O25b:H4-ST131 strain B14 plasmid pB14, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

286. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295834 (Escherichia coli O25b:H4-ST131 strain 56 plasmid p56, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

287. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295817 (Escherichia coli O25b:H4-ST131 strain B9 plasmid pB9, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

288. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to MK295819 (Escherichia coli O25b:H4-ST131 strain U10 plasmid pU10, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

289. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_MH523448 (Klebsiella pneumoniae strain KL8 plasmid pKL8-NDM, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

290. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_MG886288 (Escherichia coli strain MO plasmid pMO, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

291. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_MG836696 (Escherichia coli strain 2248 plasmid pCTXM-2248, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

292. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP029422 (Escherichia coli strain 3385 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

293. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_LC492469 (Escherichia coli strain M216 plasmid pM216_mF, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

294. spacer 8.1|3899214|43|NZ_CP024131|CRISPRCasFinder matches to NZ_CP023827 (Escherichia coli strain 4/4 plasmid p4_4.1, complete sequence) position: , mismatch: 11, identity: 0.744

atggtgacaaatgcctgatgcgctacgcttatcaggcctacag	CRISPR spacer
ccatccggcaatgcctgatgcgctgcgcttatcaggcctacaa	Protospacer
 .. . .  ***************.*****************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

48236 : 58210

Enterobacteria_phage(100.0%)

integrase

attL 47736:47758|attR 58371:58393

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
47736:47758	attL	NA	NA	NA	NA
WP_001685687.1\|48236_50570_-	P4-specific DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.8
WP_001685686.1\|50584_50905_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_000459298.1\|51040_51496_-	hypothetical protein	Q7M298	Enterobacteria_phage	1.6e-64	99.1
WP_001244670.1\|51488_51776_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	2.5e-47	96.8
WP_000980227.1\|51768_52368_-	ash family protein	Q7M2A7	Enterobacteria_phage	6.0e-51	81.8
WP_001149161.1\|52364_52631_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	1.8e-44	98.9
WP_101972776.1\|53182_53917_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	2.3e-129	98.4
WP_095501464.1\|53913_54414_+	transactivation protein	NA	NA	NA	NA
WP_001685684.1\|54487_55060_+	phage polarity suppression family protein	Q7M2A1	Enterobacteria_phage	7.2e-94	95.2
WP_001335488.1\|55356_56442_+	hypothetical protein	NA	NA	NA	NA
WP_000281857.1\|56448_56976_+	hypothetical protein	NA	NA	NA	NA
WP_001218974.1\|57022_58210_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.5e-207	91.2
58371:58393	attR	NA	NA	NA	NA

DBSCAN-SWA_2

98930 : 107150

Synechococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000587748.1\|98930_99863_-	ADP-glyceromanno-heptose 6-epimerase	E3SL51	Synechococcus_phage	6.5e-36	39.3
WP_053887456.1\|100076_101273_+	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	3.8e-36	29.4
WP_000646007.1\|101282_102308_+	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	2.1e-19	84.6
WP_087899328.1\|102661_103934_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_101972778.1\|103954_104917_+	UDP-glucuronate:LPS(HepIII) glycosyltransferase	A0A1V0SAH6	Catovirus	1.5e-06	30.6
WP_000483848.1\|104903_105863_-	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_001214147.1\|105866_107150_-	murein hydrolase activator EnvC	G9BW84	Planktothrix_phage	1.0e-07	34.3

DBSCAN-SWA_3

1073833 : 1087016

Escherichia_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|1073833_1074595_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|1074588_1075215_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272590.1\|1075354_1076494_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|1076556_1077549_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104429.1\|1077642_1079007_-	GntP family transporter	NA	NA	NA	NA
WP_001136918.1\|1079095_1079872_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|1079876_1080515_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590404.1\|1080511_1081774_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.3e-135	61.2
WP_000847985.1\|1081770_1082679_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001295181.1\|1082874_1083642_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_001141339.1\|1083692_1084349_-	protein-serine/threonine phosphatase	K7P7V3	Enterobacteria_phage	5.6e-50	45.3
WP_001272907.1\|1084454_1087016_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.3e-30	20.6

DBSCAN-SWA_4

1672445 : 1681887

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569357.1\|1672445_1673372_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8
WP_000783120.1\|1673376_1674108_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|1674088_1674196_-	protein YohO	NA	NA	NA	NA
WP_001240401.1\|1674255_1674987_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001295431.1\|1675208_1676894_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|1676890_1677610_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|1677656_1678127_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001373589.1\|1678167_1678629_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
WP_001423058.1\|1678753_1680754_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6
WP_001333512.1\|1680750_1681887_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7

DBSCAN-SWA_5

1735889 : 1792477

Enterobacteria_phage(36.36%)

holin,capsid,tail,head,terminase,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101972842.1\|1735889_1735991_-	AMP nucleosidase	A0A0N7BTS3	Escherichia_phage	5.2e-08	100.0
WP_085947970.1\|1735956_1737170_-\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_001303849.1\|1737913_1738132_-	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_001281197.1\|1738237_1738582_-	hypothetical protein	K7PJY7	Enterobacterial_phage	2.0e-59	99.1
WP_001277765.1\|1738682_1738862_-	Eag protein	A0A088CQ59	Enterobacteria_phage	3.3e-29	98.3
WP_000103027.1\|1738958_1739606_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.9e-63	50.4
WP_101972843.1\|1739602_1739974_-	ead/Ea22-like family protein	A0A0K2FJF6	Enterobacteria_phage	1.9e-31	85.2
WP_000763383.1\|1739970_1740192_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	2.9e-35	100.0
WP_077827533.1\|1740290_1740572_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	6.1e-46	96.8
WP_000548522.1\|1740582_1740774_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
WP_032189860.1\|1740746_1740929_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	4.8e-28	96.7
WP_097485495.1\|1740925_1741606_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	6.0e-132	99.6
WP_000100845.1\|1741602_1742388_-	phage recombination protein Bet	A0A0N7KZJ3	Stx2-converting_phage	1.1e-148	100.0
WP_000995439.1\|1742393_1742690_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000372937.1\|1742764_1742908_-	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	1.2e-18	100.0
WP_001198861.1\|1742876_1743041_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000065374.1\|1743113_1743482_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_000167595.1\|1743632_1744103_-	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
WP_101972844.1\|1744161_1744545_-	antitermination protein	G9L671	Escherichia_phage	3.3e-63	99.2
WP_001278657.1\|1745051_1745672_-	hypothetical protein	A4KWT4	Enterobacteria_phage	6.2e-51	99.5
WP_001207140.1\|1745668_1746103_-	hypothetical protein	A4KWT5	Enterobacteria_phage	1.2e-77	100.0
WP_000885926.1\|1746173_1746515_-	DUF3024 domain-containing protein	G9L675	Escherichia_phage	2.5e-62	99.1
WP_000428098.1\|1746575_1747280_-	helix-turn-helix transcriptional regulator	A0A0P0ZE37	Stx2-converting_phage	1.1e-133	100.0
WP_000064148.1\|1747393_1747627_+	hypothetical protein	A0A0P0ZDD7	Stx2-converting_phage	8.0e-36	100.0
WP_024216147.1\|1747765_1748062_+	regulatory protein	G9L678	Escherichia_phage	1.2e-47	99.0
WP_000185454.1\|1748094_1749033_+	replication protein	A0A1I9LJP3	Stx_converting_phage	1.3e-172	100.0
WP_001510925.1\|1749029_1749731_+	replication P family protein	Q6H9X6	Enterobacteria_phage	1.7e-129	99.6
WP_000145908.1\|1749727_1750018_+	protein ren	A0A0N6WES4	Escherichia_phage	5.7e-47	100.0
WP_001000130.1\|1750088_1750367_+	hypothetical protein	Q9EYB9	Enterobacteria_phage	4.4e-49	100.0
WP_000103678.1\|1750499_1750715_+	hypothetical protein	A0A0N7KZ98	Stx2-converting_phage	7.7e-33	100.0
WP_001281772.1\|1750725_1750962_+	restriction alleviation protein, Lar family	Q8HA09	Enterobacteria_phage	1.2e-39	100.0
WP_024216032.1\|1750918_1751365_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	1.2e-80	98.6
WP_000153288.1\|1751361_1751889_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	7.3e-101	100.0
WP_001254220.1\|1751885_1752062_+	NinE family protein	K7PHE6	Enterobacteria_phage	2.7e-28	100.0
WP_000924594.1\|1752064_1752466_+	hypothetical protein	K7PJK0	Enterobacteria_phage	4.6e-71	98.5
WP_072178476.1\|1752425_1752644_+	protein ninF	G9L691	Escherichia_phage	1.7e-19	87.5
WP_101972845.1\|1752606_1753113_+	HNH endonuclease	A0A248SKL5	Klebsiella_phage	1.2e-36	47.9
WP_024195586.1\|1753003_1753174_+	ninF	NA	NA	NA	NA
WP_001108084.1\|1753166_1753733_+	endonuclease	A0A1U9AJK5	Stx1_converting_phage	6.6e-108	99.5
WP_044706635.1\|1753707_1754310_+	protein ninG	A0A1U9AJF8	Stx1_converting_phage	1.2e-91	95.1
WP_001028858.1\|1754306_1754978_+	serine/threonine protein phosphatase	Q5TJL8	Enterobacteria_phage	2.4e-133	100.0
WP_000512807.1\|1754968_1755457_+	late gene antiterminator protein	Q5TJL7	Enterobacteria_phage	7.0e-90	100.0
WP_101972846.1\|1757005_1758856_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	98.9
WP_000411813.1\|1759148_1759355_+\|holin	holin	Q6H9V8	Enterobacteria_phage	1.2e-30	97.1
WP_024216148.1\|1759359_1759704_+	YdfR family protein	A0A0P0ZD64	Stx2-converting_phage	2.1e-56	97.4
WP_025380493.1\|1759754_1760288_+	lysozyme	Q6H9V6	Enterobacteria_phage	1.3e-100	96.0
WP_000661708.1\|1760561_1761257_+	phage antirepressor protein	Q5MBW0	Stx1-converting_phage	3.6e-124	98.7
WP_001280923.1\|1761351_1761483_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	3.8e-11	93.0
WP_012816791.1\|1761705_1761891_+	membrane protein	A0A0P0ZCT3	Stx2-converting_phage	1.2e-18	100.0
WP_000828070.1\|1762291_1762618_+	TonB family protein	H6WZK5	Escherichia_phage	6.3e-55	98.1
WP_000095732.1\|1762749_1762950_-	DUF3950 domain-containing protein	H6WZK6	Escherichia_phage	3.7e-29	95.5
WP_025380422.1\|1762991_1763357_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	5.8e-65	99.2
WP_000958398.1\|1763646_1764210_+\|terminase	terminase small subunit	B6DZ97	Enterobacteria_phage	7.3e-83	94.1
WP_101972847.1\|1764206_1765868_+\|terminase	terminase large subunit	A0A0N7KZG0	Stx2-converting_phage	0.0e+00	99.3
WP_044869027.1\|1765931_1767869_+\|capsid	phage major capsid protein	A0A0P0ZCT9	Stx2-converting_phage	0.0e+00	99.8
WP_001063027.1\|1767913_1768135_+	hypothetical protein	H6WZL1	Escherichia_phage	9.9e-36	98.6
WP_000125968.1\|1770661_1770988_+\|head,tail	phage gp6-like head-tail connector protein	B6ETF0	Enterobacteria_phage	2.7e-53	98.1
WP_001007905.1\|1770997_1771348_+\|head	phage head closure protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
WP_000573391.1\|1771344_1771791_+	HK97 gp10 family phage protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
WP_000133388.1\|1771787_1772132_+	DUF3168 domain-containing protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
WP_021497599.1\|1772190_1772907_+\|tail	phage major tail 2 family protein	A0A0P0ZD29	Stx2-converting_phage	2.3e-126	97.9
WP_001030063.1\|1772912_1773287_+\|tail	tail assembly protein	A0A0N7KZA2	Stx2-converting_phage	7.8e-65	100.0
WP_001453698.1\|1773382_1773592_+	DUF4035 domain-containing protein	A0A0P0ZDE6	Stx2-converting_phage	2.0e-33	100.0
WP_101972848.1\|1773643_1776886_+\|tail	phage tail tape measure protein	A0A0P0ZE78	Stx2-converting_phage	0.0e+00	98.4
WP_000807954.1\|1776878_1777220_+\|tail	phage tail protein	A0A0P0ZBQ8	Stx2-converting_phage	5.1e-63	100.0
WP_101972849.1\|1777219_1777918_+\|tail	phage minor tail protein L	Q6H9T5	Enterobacteria_phage	8.1e-132	98.7
WP_001302649.1\|1777934_1778255_-	Arc family DNA-binding protein	A0A0P0ZBD1	Stx2-converting_phage	3.0e-49	100.0
WP_001154345.1\|1778362_1778536_+	Arc family DNA-binding protein	A0A0P0ZC65	Stx2-converting_phage	3.4e-23	100.0
WP_001428824.1\|1778606_1779530_+	phage antirepressor Ant	A0A0N7KZK0	Stx2-converting_phage	1.3e-177	100.0
WP_000967281.1\|1779584_1780322_+\|tail	phage tail protein	A0A0P0ZDT1	Stx2-converting_phage	6.1e-146	97.1
WP_122995614.1\|1780267_1780900_+\|tail	tail assembly protein	A0A0P0ZDX8	Stx2-converting_phage	1.2e-105	99.0
WP_101972850.1\|1781135_1784615_+	host specificity protein J	A0A0P0ZDT4	Stx2-converting_phage	0.0e+00	97.2
WP_089645828.1\|1784681_1785281_+	Ail/Lom family outer membrane beta-barrel protein	Q687E7	Enterobacteria_phage	3.0e-111	99.5
WP_101972851.1\|1785345_1786659_+\|tail	phage tail protein	H6WZM9	Escherichia_phage	3.8e-74	97.0
WP_101972852.1\|1786660_1786930_+\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	2.4e-44	96.6
WP_101972853.1\|1787139_1787787_+	T3SS effector NleG family protein	B6DZC0	Enterobacteria_phage	3.7e-38	43.8
WP_101972854.1\|1788484_1789879_-	type III secretion system effector NleA	Q6H9S2	Enterobacteria_phage	2.8e-216	90.8
WP_001386899.1\|1790471_1790528_+	type I toxin-antitoxin system Ibs family toxin	NA	NA	NA	NA
WP_085949156.1\|1791264_1792477_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6

DBSCAN-SWA_6

1830735 : 1838383

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021557911.1\|1830735_1832130_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	31.9
WP_001767435.1\|1832304_1833198_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	6.6e-46	42.2
WP_101972856.1\|1833569_1834655_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.5e-100	54.2
WP_072795322.1\|1834654_1835554_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.7e-29	35.6
WP_072795324.1\|1835611_1836490_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.5e-106	63.4
WP_072795326.1\|1836494_1837034_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.1e-51	58.4
WP_072795328.1\|1837078_1838383_+	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	6.5e-26	28.3

DBSCAN-SWA_7

1883964 : 1971521

Enterobacteria_phage(38.0%)

integrase,portal,holin,capsid,tail,head,terminase,protease,transposase

attL 1878710:1878726|attR 1926743:1926759

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1878710:1878726	attL	NA	NA	NA	NA
WP_000255944.1\|1883964_1884987_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
WP_000349537.1\|1885803_1885956_+	hypothetical protein	NA	NA	NA	NA
WP_000813432.1\|1886693_1887296_-	hypothetical protein	NA	NA	NA	NA
WP_077527097.1\|1887389_1887668_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001352612.1\|1888303_1888480_+	hemolysin activation protein	NA	NA	NA	NA
WP_000221529.1\|1889195_1889765_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_032186701.1\|1889930_1890323_+	hypothetical protein	NA	NA	NA	NA
WP_001459868.1\|1891486_1891891_+	hypothetical protein	NA	NA	NA	NA
WP_001459860.1\|1896810_1897026_-	hypothetical protein	NA	NA	NA	NA
WP_087899328.1\|1897110_1898383_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_101972861.1\|1898354_1899590_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_000973176.1\|1901640_1902186_+	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_001326708.1\|1902182_1902926_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_001459858.1\|1902937_1904017_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_072163087.1\|1904078_1905014_+	L,D-transpeptidase	NA	NA	NA	NA
WP_001011462.1\|1905471_1906389_+	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
WP_033803174.1\|1906490_1907441_+	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_000943916.1\|1907558_1909202_+	toxic metabolite efflux MATE transporter YeeO	NA	NA	NA	NA
WP_000532923.1\|1909829_1910546_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001060244.1\|1910888_1912343_-	AMP nucleosidase	NA	NA	NA	NA
WP_000378575.1\|1912444_1913761_-	shikimate transporter	NA	NA	NA	NA
WP_001459817.1\|1914075_1915128_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_001302302.1\|1922955_1923753_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_000533607.1\|1923988_1925014_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	6.4e-101	57.3
WP_000094838.1\|1925013_1925217_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000034469.1\|1925275_1927747_-	exonuclease	A0A192Y6E0	Salmonella_phage	1.5e-55	56.0
1926743:1926759	attR	NA	NA	NA	NA
WP_000199479.1\|1927842_1928031_-	DUF1482 family protein	NA	NA	NA	NA
WP_000449172.1\|1928027_1928216_-	cell division inhibitor	NA	NA	NA	NA
WP_000379610.1\|1928705_1928858_-	DUF1391 family protein	M4QQ57	Salicola_phage	8.7e-07	51.1
WP_000948454.1\|1929176_1929653_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	5.7e-12	53.4
WP_000711018.1\|1929777_1930101_+	transcriptional regulator	A0A0R6PH31	Moraxella_phage	6.2e-10	44.9
WP_000693916.1\|1930084_1930510_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_101972862.1\|1930532_1931501_+	DNA-binding protein	U5P0A0	Shigella_phage	1.0e-71	52.1
WP_000788763.1\|1931507_1932254_+	ATP-binding protein	A0A088CBP4	Shigella_phage	3.1e-113	83.8
WP_000451007.1\|1932275_1933046_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
WP_001151233.1\|1933061_1933475_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	9.8e-61	89.1
WP_000160654.1\|1933826_1934600_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000955173.1\|1934965_1935103_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	5.4e-08	96.6
WP_001178384.1\|1935160_1936234_-\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
WP_000813263.1\|1936305_1936461_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.9e-17	94.1
WP_001341388.1\|1936628_1936907_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
WP_001265133.1\|1936908_1937958_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.4e-110	54.9
WP_001217436.1\|1937970_1938342_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.3e-35	63.7
WP_000090265.1\|1938331_1938703_+	antitermination protein	Q777W5	Enterobacteria_phage	1.0e-53	84.0
WP_000265267.1\|1938854_1939673_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000917737.1\|1939959_1940157_+	hypothetical protein	S5MQK8	Escherichia_phage	2.6e-27	96.9
WP_119187337.1\|1940294_1941008_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_101972864.1\|1941774_1943625_+	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	96.1
WP_000411814.1\|1944072_1944279_+\|holin	holin	Q6H9V8	Enterobacteria_phage	5.3e-31	98.5
WP_000138558.1\|1944535_1944808_-	hypothetical protein	NA	NA	NA	NA
WP_001003118.1\|1944967_1945501_+	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
WP_000675931.1\|1945721_1945835_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
WP_141029367.1\|1946056_1946242_+	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	6.0e-18	98.4
WP_001303878.1\|1946769_1947084_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001300236.1\|1947165_1947390_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
WP_000235436.1\|1947792_1948302_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_101972865.1\|1948273_1950202_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.6e-262	66.4
WP_000258991.1\|1950185_1950392_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	4.2e-12	60.0
WP_001430223.1\|1950388_1951981_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	1.1e-184	61.3
WP_101972866.1\|1951970_1953476_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	2.7e-100	53.7
WP_000256809.1\|1953512_1953860_+\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.6e-22	58.1
WP_101972867.1\|1953917_1954943_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.1e-112	60.4
WP_000201523.1\|1954994_1955369_+	hypothetical protein	NA	NA	NA	NA
WP_001204549.1\|1955361_1955715_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	8.7e-42	70.1
WP_000975046.1\|1955730_1956264_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.2e-57	65.1
WP_000683066.1\|1956260_1956656_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	3.9e-59	83.2
WP_000106789.1\|1956663_1957416_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	3.2e-134	98.4
WP_000479105.1\|1957429_1957861_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.7e-42	68.8
WP_000533425.1\|1957887_1958301_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	2.7e-42	82.2
WP_000082492.1\|1958281_1960861_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	82.9
WP_000847304.1\|1960857_1961187_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	2.2e-55	95.4
WP_001152201.1\|1961186_1961885_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	4.0e-131	97.8
WP_101972868.1\|1961895_1962639_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.3e-145	96.8
WP_072280596.1\|1962584_1963217_+\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	1.1e-103	98.6
WP_000649829.1\|1963407_1963935_-	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.8e-59	60.5
WP_101972869.1\|1964068_1967545_+	host specificity protein J	Q6H9T2	Enterobacteria_phage	0.0e+00	95.6
WP_001815756.1\|1967613_1968237_+	Ail/Lom family outer membrane beta-barrel protein	A0A1U8QHD6	Enterobacteria_phage	1.9e-68	60.9
WP_101972870.1\|1968301_1969615_+\|tail	phage tail protein	Q9EYE8	Enterobacteria_phage	2.4e-76	98.6
WP_001101707.1\|1969616_1969886_+\|tail	phage tail protein	B6DZB8	Enterobacteria_phage	9.3e-44	97.8
WP_000950813.1\|1970062_1971043_+	type III secretion system effector arginine glycosyltransferase NleB2	Q8HAB2	Salmonella_phage	2.9e-87	49.5
WP_095111390.1\|1971389_1971521_+	hypothetical protein	K7PMH7	Enterobacteria_phage	1.5e-07	76.5

DBSCAN-SWA_8

2363810 : 2438608

Enterobacteria_phage(41.82%)

integrase,portal,lysis,tail,terminase,protease,transposase

attL 2358161:2358176|attR 2394036:2394051

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2358161:2358176	attL	NA	NA	NA	NA
WP_001260865.1\|2363810_2364632_-\|protease	serine protease	NA	NA	NA	NA
WP_000233090.1\|2364731_2364815_-	hypothetical protein	NA	NA	NA	NA
WP_101972889.1\|2364907_2365243_-	acid shock protein	NA	NA	NA	NA
WP_000091840.1\|2365639_2366893_-	MFS transporter	NA	NA	NA	NA
WP_001019525.1\|2366999_2367893_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000225262.1\|2368027_2369248_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_000919231.1\|2369372_2370068_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_001315626.1\|2370020_2371313_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
WP_000148710.1\|2371471_2372086_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
WP_000526477.1\|2372128_2372983_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000213028.1\|2372984_2373602_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
WP_072163036.1\|2373612_2376036_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-208	48.8
WP_001295396.1\|2378626_2378932_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_072104773.1\|2379039_2379750_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138584.1\|2379752_2380313_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705197.1\|2380347_2380689_-	DUF1283 family protein	NA	NA	NA	NA
WP_001295395.1\|2380823_2381150_+	YnfA family protein	A0A218MNG8	uncultured_virus	7.6e-24	55.6
WP_001295394.1\|2381355_2382570_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000836059.1\|2382581_2383601_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_021531328.1\|2383658_2383769_+	hypothetical protein	NA	NA	NA	NA
WP_000876979.1\|2383788_2385069_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	8.6e-156	62.3
WP_001296941.1\|2385103_2385340_-	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_101972890.1\|2385427_2387899_-	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	56.7
WP_001083297.1\|2387992_2388184_-\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000854559.1\|2388180_2388369_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001299931.1\|2388768_2388933_+	hypothetical protein	NA	NA	NA	NA
WP_001171952.1\|2388936_2389155_-	hypothetical protein	NA	NA	NA	NA
WP_000379588.1\|2389314_2389470_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.8e-07	51.1
WP_000381212.1\|2389638_2390046_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	7.2e-32	51.9
WP_000705355.1\|2390336_2390858_+	hypothetical protein	NA	NA	NA	NA
WP_001151262.1\|2391848_2392271_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.0
WP_101972891.1\|2392267_2392642_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.4e-37	69.1
WP_085947970.1\|2392667_2393880_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_000955178.1\|2395243_2395426_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	6.3e-12	74.5
2394036:2394051	attR	NA	NA	NA	NA
WP_000589005.1\|2395603_2396917_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_101972892.1\|2397353_2397518_-	protein FlxA	NA	NA	NA	NA
WP_001171554.1\|2397561_2397942_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
WP_000612591.1\|2397938_2398286_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_053888474.1\|2398335_2399874_+\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	6.0e-297	99.2
WP_001326990.1\|2400338_2400644_-	hypothetical protein	NA	NA	NA	NA
WP_000534858.1\|2400668_2400908_+	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_000323025.1\|2400907_2401195_+	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000813254.1\|2401266_2401422_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_099949844.1\|2401638_2401890_+	hypothetical protein	NA	NA	NA	NA
WP_012304870.1\|2401956_2402235_+	hypothetical protein	NA	NA	NA	NA
WP_099949845.1\|2402236_2403286_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-112	57.3
WP_101972893.1\|2403299_2404052_+	antitermination protein	A0A192Y5X6	Salmonella_phage	2.7e-133	92.4
WP_120795389.1\|2404329_2404419_-	Qin prophage; protein YnfS	NA	NA	NA	NA
WP_000087756.1\|2404473_2404686_-	cold shock-like protein CspF	NA	NA	NA	NA
WP_000066484.1\|2404986_2405202_+	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
WP_000839590.1\|2405955_2406171_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.1e-31	94.4
WP_000189916.1\|2406175_2406487_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
WP_085949156.1\|2406643_2407857_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6
WP_001071769.1\|2408326_2408824_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
WP_000066495.1\|2409185_2409398_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_071524604.1\|2409408_2409597_+	cold-shock protein	NA	NA	NA	NA
WP_120795388.1\|2409599_2409665_+	Qin prophage; protein YnfR	NA	NA	NA	NA
WP_001309517.1\|2409744_2409900_+	hypothetical protein	NA	NA	NA	NA
WP_001019139.1\|2410071_2410245_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000035576.1\|2410396_2410828_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	6.6e-60	90.6
WP_099949846.1\|2411128_2411335_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	1.9e-25	89.7
WP_000421825.1\|2411887_2412427_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	1.8e-94	100.0
WP_101972895.1\|2412435_2414535_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	0.0e+00	99.3
WP_001072975.1\|2414531_2414744_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_061342262.1\|2414743_2416252_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	1.2e-289	99.8
WP_101972896.1\|2416196_2418224_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.5
WP_001097050.1\|2418310_2418634_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283153.1\|2418626_2418902_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677106.1\|2418913_2419492_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	4.2e-102	100.0
WP_001079418.1\|2419488_2419890_+\|tail	tail protein	A5LH34	Enterobacteria_phage	2.4e-72	98.5
WP_000211124.1\|2419900_2420644_+\|tail	tail protein	A5LH35	Enterobacteria_phage	6.0e-133	99.6
WP_101973063.1\|2420704_2421091_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	6.1e-65	99.2
WP_001161009.1\|2421099_2421429_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_101972897.1\|2421400_2424451_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	95.4
WP_000447253.1\|2424450_2424780_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_001152388.1\|2424789_2425488_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.6
WP_000140720.1\|2425493_2426237_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.3e-148	97.2
WP_000090901.1\|2426173_2426806_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.9e-95	98.6
WP_101972898.1\|2426866_2430169_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	97.3
WP_158297017.1\|2430910_2431165_-	hypothetical protein	NA	NA	NA	NA
WP_053274246.1\|2431127_2431727_+	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	2.8e-109	97.0
WP_101972899.1\|2431791_2434815_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.1e-67	81.4
WP_000885587.1\|2434814_2435390_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.0e-104	96.9
WP_000086527.1\|2435487_2436078_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000836768.1\|2436394_2436628_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_120795384.1\|2436696_2436810_-	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000547191.1\|2437279_2438608_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2951809 : 2961081

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001189321.1\|2951809_2952643_+	curli production assembly/transport protein CsgG	M1ICK2	Pelagibacter_phage	5.1e-40	40.1
WP_001300785.1\|2952706_2953198_-	DUF1097 domain-containing protein	NA	NA	NA	NA
WP_001001902.1\|2953299_2953854_-	molecular chaperone	NA	NA	NA	NA
WP_001342369.1\|2953877_2954228_-	hypothetical protein	NA	NA	NA	NA
WP_049142820.1\|2954258_2954531_+	hypothetical protein	A0A1D7XF78	Escherichia_phage	1.4e-18	52.2
WP_101972930.1\|2954543_2954930_+	hypothetical protein	C4MZ15	Escherichia_phage	6.7e-11	47.3
WP_077134559.1\|2955241_2955487_+	hypothetical protein	NA	NA	NA	NA
WP_101972931.1\|2955552_2957232_+	recombinase family protein	Q6V7T7	Burkholderia_virus	6.4e-42	28.5
WP_101972932.1\|2957305_2958481_-	hypothetical protein	A7XF87	Enterobacteria_phage	1.3e-25	29.8
WP_148724785.1\|2958648_2959206_+	hypothetical protein	NA	NA	NA	NA
WP_101972933.1\|2959205_2960696_+	DEAD/DEAH box helicase family protein	A0A0B7MRL8	Enterobacteria_phage	1.0e-245	80.6
WP_000949338.1\|2960727_2961081_-	DUF882 domain-containing protein	A0A140XFU9	Salmonella_phage	2.9e-37	59.8

DBSCAN-SWA_10

2978601 : 3133995

176

Enterobacteria_phage(43.12%)

portal,integrase,holin,capsid,lysis,tail,terminase,protease,transposase

attL 3029302:3029361|attR 3109085:3109853

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101972939.1\|2978601_2980605_-\|capsid	major capsid protein	G8EXZ9	Synechococcus_phage	3.6e-31	25.4
WP_101972940.1\|2980650_2982162_-\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	9.3e-32	27.2
WP_094319614.1\|2982172_2982670_-	hypothetical protein	NA	NA	NA	NA
WP_101972941.1\|2982742_2984650_-\|terminase	terminase	D6PFE7	uncultured_phage	3.3e-34	28.0
WP_101972942.1\|2984735_2985338_+	hypothetical protein	NA	NA	NA	NA
WP_000208371.1\|2985373_2985601_+	hypothetical protein	NA	NA	NA	NA
WP_063078207.1\|2985765_2986596_-	Rha family transcriptional regulator	A0A2I7R140	Vibrio_phage	1.4e-10	34.1
WP_000657811.1\|2986685_2987018_-	hypothetical protein	NA	NA	NA	NA
WP_063078206.1\|2987138_2987591_-	hypothetical protein	NA	NA	NA	NA
WP_096216076.1\|2988977_2989160_+	hypothetical protein	NA	NA	NA	NA
WP_000898985.1\|2989279_2990221_+	hypothetical protein	NA	NA	NA	NA
WP_032192671.1\|2990503_2990788_-	hypothetical protein	NA	NA	NA	NA
WP_000656992.1\|2990882_2991437_-	hypothetical protein	NA	NA	NA	NA
WP_000351315.1\|2992260_2993199_-	glyoxylate/hydroxypyruvate reductase GhrA	NA	NA	NA	NA
WP_000225124.1\|2993974_2994430_-	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_000258765.1\|2995244_2996309_-	phosphate starvation-inducible protein PhoH	R4II13	Cronobacter_phage	1.1e-90	76.7
WP_001199163.1\|2996653_2997925_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_000154414.1\|2997930_2999058_-	iron uptake system protein EfeO	NA	NA	NA	NA
WP_000497942.1\|2999115_2999946_-	FTR1 family protein	NA	NA	NA	NA
WP_001018486.1\|3000610_3002119_-	sodium/proline symporter PutP	NA	NA	NA	NA
WP_000979516.1\|3002277_3002487_-	hypothetical protein	NA	NA	NA	NA
WP_001459641.1\|3002541_3006504_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000191700.1\|3006543_3007182_-	HTH-type transcriptional regulator RutR	NA	NA	NA	NA
WP_001352489.1\|3007469_3008561_+	pyrimidine utilization protein A	NA	NA	NA	NA
WP_001307708.1\|3008560_3009253_+	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB	NA	NA	NA	NA
WP_001126772.1\|3009264_3009651_+	pyrimidine utilization protein C	NA	NA	NA	NA
WP_001459640.1\|3009658_3010459_+	pyrimidine utilization protein D	NA	NA	NA	NA
WP_001001185.1\|3010468_3011059_+	malonic semialdehyde reductase	NA	NA	NA	NA
WP_001028095.1\|3011069_3011564_+	pyrimidine utilization flavin reductase protein F	Q9KX93	Enterobacteria_phage	5.0e-51	97.9
WP_001459639.1\|3011584_3012913_+	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	6.3e-234	98.6
WP_001273658.1\|3013170_3013344_-	general stress protein	Q9KX95	Enterobacteria_phage	4.9e-06	96.3
WP_001151437.1\|3013716_3014313_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_001143120.1\|3014333_3014561_+	hypothetical protein	NA	NA	NA	NA
WP_001044279.1\|3014598_3015840_-	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA
WP_000420621.1\|3017648_3018569_+	curved DNA-binding protein	A0A1V0SIM1	Klosneuvirus	4.2e-11	43.0
WP_000024560.1\|3018568_3018874_+	chaperone modulator CbpM	NA	NA	NA	NA
WP_000209894.1\|3019025_3019625_-	molecular chaperone TorD	NA	NA	NA	NA
WP_001063152.1\|3019621_3022168_-	trimethylamine-N-oxide reductase TorA	A0A077SK27	Escherichia_phage	2.2e-70	29.4
WP_001230242.1\|3022167_3023340_-	pentaheme c-type cytochrome TorC	NA	NA	NA	NA
WP_001120125.1\|3023469_3024162_+	two-component system response regulator TorR	W8CYM9	Bacillus_phage	4.5e-18	28.0
WP_001264933.1\|3024134_3025163_-	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA
WP_021570495.1\|3025639_3026293_+	EspJ family T3SS effector ADP-ribosyltransferase	NA	NA	NA	NA
WP_101973071.1\|3026305_3026533_-	hypothetical protein	NA	NA	NA	NA
WP_087899328.1\|3027159_3028433_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_024248136.1\|3028554_3029193_-	DUF1076 domain-containing protein	H6WZN1	Escherichia_phage	4.5e-28	39.6
3029302:3029361	attL	NA	NA	NA	NA
WP_101972944.1\|3030084_3030354_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	2.1e-43	97.8
WP_101972945.1\|3030355_3031669_-\|tail	phage tail protein	A0A0P0ZCC1	Stx2-converting_phage	2.2e-74	96.1
WP_101972946.1\|3031820_3032420_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	1.0e-98	88.4
WP_101972947.1\|3032487_3035967_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.7
WP_050575332.1\|3036027_3036630_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.0e-86	85.1
WP_000140720.1\|3036566_3037310_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.3e-148	97.2
WP_001152388.1\|3037315_3038014_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	8.6e-134	99.6
WP_000447253.1\|3038023_3038353_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_096859573.1\|3038352_3041403_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	94.9
WP_001161009.1\|3041374_3041704_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_001300035.1\|3041712_3042099_-\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
WP_101972948.1\|3042159_3042903_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.0e-132	99.6
WP_001079411.1\|3042913_3043315_-\|tail	tail protein	A5LH34	Enterobacteria_phage	2.4e-72	98.5
WP_101972949.1\|3043311_3043890_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.8e-95	92.2
WP_024223043.1\|3043901_3044177_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	3.3e-44	97.8
WP_001097050.1\|3044169_3044493_-	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_096859574.1\|3044578_3046606_-\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.4
WP_024223045.1\|3046550_3048059_-\|portal	phage portal protein	A5LH29	Enterobacteria_phage	8.6e-288	99.4
WP_001072975.1\|3048058_3048271_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_096859575.1\|3048267_3050370_-\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	96.9
WP_000373425.1\|3050369_3050864_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_096859577.1\|3051539_3051692_-	hypothetical protein	A0A291AWZ2	Escherichia_phage	2.8e-21	98.0
WP_101972950.1\|3051679_3052117_-\|lysis	lysis protein	K7P6J0	Enterobacteria_phage	5.0e-71	97.9
WP_023307783.1\|3052113_3052611_-	lysozyme	A0A1B5FP97	Escherichia_phage	2.9e-91	98.8
WP_000284524.1\|3052610_3052826_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	4.5e-33	98.6
WP_033816266.1\|3052968_3053367_+	hypothetical protein	H6WZJ8	Escherichia_phage	6.9e-11	83.3
WP_000499454.1\|3053447_3053606_-	DUF3927 family protein	NA	NA	NA	NA
WP_001302581.1\|3053691_3054435_-	hypothetical protein	NA	NA	NA	NA
WP_001235438.1\|3054686_3055310_-	antitermination protein	K7P6X1	Enterobacteria_phage	4.4e-113	98.1
WP_024232119.1\|3055306_3055972_-	serine/threonine protein phosphatase	K7P721	Enterobacteria_phage	9.4e-130	98.2
WP_001591711.1\|3055968_3056580_-	recombination protein NinG	Q716C3	Shigella_phage	9.6e-97	98.0
WP_000567007.1\|3056572_3056743_-	protein ninF	M1FPE8	Enterobacteria_phage	1.4e-26	100.0
WP_001254251.1\|3056739_3056922_-	NinE family protein	Q716C5	Shigella_phage	1.3e-28	100.0
WP_000255944.1\|3057200_3058223_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
WP_001300609.1\|3058219_3059002_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.0e-139	100.0
WP_001591709.1\|3059290_3059563_-	hypothetical protein	Q9ZWY1	Enterobacteria_phage	3.8e-37	84.3
WP_000145926.1\|3059633_3059924_-	protein ren	O48423	Enterobacteria_phage	9.6e-47	100.0
WP_024232112.1\|3059920_3060622_-	hypothetical protein	K7P6G2	Enterobacteria_phage	1.7e-129	99.6
WP_000185501.1\|3060618_3061518_-	replication protein	A0A0K2FJ31	Enterobacteria_phage	3.2e-173	99.7
WP_001177650.1\|3061552_3061831_-	transcriptional regulator	K7P7A2	Enterobacteria_phage	1.6e-43	100.0
WP_000276886.1\|3061939_3062125_-	hypothetical protein	A5VW97	Enterobacteria_phage	1.6e-26	100.0
WP_001095981.1\|3062205_3062856_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	4.1e-122	98.6
WP_032352705.1\|3063168_3063441_+	hypothetical protein	K7PH69	Enterobacterial_phage	3.3e-25	95.6
WP_001066173.1\|3063457_3064039_-	superinfection exclusion protein B	K7P6T7	Enterobacteria_phage	1.5e-91	92.2
WP_024232195.1\|3064252_3064453_+	Restriction inhibitor protein ral	A5VWA0	Enterobacteria_phage	6.7e-31	93.9
WP_024231983.1\|3064635_3065004_+	DUF2528 family protein	M1FPD2	Enterobacteria_phage	1.7e-64	98.4
WP_101972951.1\|3065076_3065226_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N7KZ85	Stx2-converting_phage	9.4e-14	89.7
WP_085948136.1\|3065231_3066444_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	1.8e-166	97.6
WP_001702774.1\|3066522_3066687_+	host cell division inhibitory peptide Kil	A0A0P0ZC96	Stx2-converting_phage	1.0e-21	96.3
WP_000995441.1\|3066740_3067037_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-48	99.0
WP_000100844.1\|3067042_3067828_+	phage recombination protein Bet	A0A0K2FJF1	Enterobacteria_phage	1.4e-148	100.0
WP_000186812.1\|3067824_3068505_+	YqaJ viral recombinase family protein	A0A0N6WET1	Escherichia_phage	1.6e-132	100.0
WP_032189860.1\|3068501_3068684_+	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	4.8e-28	96.7
WP_000548522.1\|3068656_3068848_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	6.2e-26	96.8
WP_077827533.1\|3068858_3069140_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	6.1e-46	96.8
WP_000763378.1\|3069238_3069460_+	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	8.4e-35	97.3
WP_074464777.1\|3069456_3070146_+	ead/Ea22-like family protein	K7P6J7	Enterobacteria_phage	1.8e-54	56.2
WP_000951713.1\|3070508_3070718_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
WP_000208005.1\|3070714_3071512_+	DUF550 domain-containing protein	A0A075B8H2	Enterobacteria_phage	5.7e-49	41.1
WP_024231740.1\|3071626_3071908_+	hypothetical protein	NA	NA	NA	NA
WP_000545741.1\|3071996_3072164_+	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	4.9e-27	98.2
WP_001303849.1\|3072203_3072422_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_001297110.1\|3072399_3073473_+\|integrase	tyrosine-type recombinase/integrase	Q9G075	Enterobacteria_phage	1.1e-199	99.4
WP_101972952.1\|3073567_3076312_+	TMAO reductase system sensor histidine kinase/response regulator TorS	A0A1V0SGX0	Hokovirus	2.7e-37	32.2
WP_053887301.1\|3076383_3077457_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_001019197.1\|3077504_3077678_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001309400.1\|3077667_3077898_-	protein YmcE	NA	NA	NA	NA
WP_071524879.1\|3077872_3078061_-	cold-shock protein	NA	NA	NA	NA
WP_000066490.1\|3078071_3078284_-	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	7.8e-22	71.4
WP_000087763.1\|3078569_3078782_+	cold shock-like protein CspH	NA	NA	NA	NA
WP_001424190.1\|3079223_3079529_+	hypothetical protein	NA	NA	NA	NA
WP_001247609.1\|3079635_3080280_+	YjbF family lipoprotein	NA	NA	NA	NA
WP_001038048.1\|3080276_3081023_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_000742360.1\|3081022_3083119_+	YjbH domain-containing protein	NA	NA	NA	NA
WP_001295357.1\|3083164_3084304_+	polysaccharide export protein	NA	NA	NA	NA
WP_000057873.1\|3084291_3084738_+	protein-tyrosine-phosphatase Etp	NA	NA	NA	NA
WP_000208666.1\|3084757_3086938_+	tyrosine-protein kinase	NA	NA	NA	NA
WP_001300464.1\|3087052_3088351_-	AppA family phytase/histidine-type acid phosphatase	NA	NA	NA	NA
WP_000270305.1\|3088430_3088523_-	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA
WP_101972953.1\|3088535_3089672_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_000263577.1\|3089683_3091228_-	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA
WP_000004899.1\|3091361_3092219_-	hydrogenase expression/formation protein	NA	NA	NA	NA
WP_000063978.1\|3092215_3092614_-	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
WP_000003671.1\|3092610_3093198_-\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
WP_001186424.1\|3093194_3093902_-	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_000107384.1\|3093920_3095714_-	Ni/Fe-hydrogenase large subunit	NA	NA	NA	NA
WP_001058323.1\|3095710_3096829_-	hydrogenase 1 small subunit	NA	NA	NA	NA
WP_001443410.1\|3097446_3097830_+	hypothetical protein	Q6H9S1	Enterobacteria_phage	4.4e-55	84.3
WP_101972954.1\|3098275_3099310_+	Tir-cytoskeleton coupling protein TccP2	NA	NA	NA	NA
WP_101972944.1\|3099435_3099705_-\|tail	phage tail protein	Q687E5	Enterobacteria_phage	2.1e-43	97.8
WP_101972955.1\|3099706_3101020_-\|tail	phage tail protein	A0A0P0ZD68	Stx2-converting_phage	6.9e-76	98.2
WP_101972956.1\|3101837_3105317_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	88.8
WP_000090894.1\|3105377_3106010_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.0e-96	99.0
WP_000194780.1\|3105946_3106690_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_101972957.1\|3106695_3107394_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-133	99.6
WP_000847379.1\|3107393_3107723_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_001300236.1\|3109853_3110078_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.9e-19	88.7
3109085:3109853	attR	NA	NA	NA	NA
WP_001303878.1\|3110159_3110474_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_141029367.1\|3111001_3111187_-	hypothetical protein	A0A0P0ZCT3	Stx2-converting_phage	6.0e-18	98.4
WP_000675931.1\|3111408_3111522_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
WP_001003118.1\|3111742_3112276_-	lysozyme	A0A1U9AJ98	Stx1_converting_phage	3.1e-99	94.4
WP_000138558.1\|3112435_3112708_+	hypothetical protein	NA	NA	NA	NA
WP_000411814.1\|3112963_3113170_-\|holin	holin	Q6H9V8	Enterobacteria_phage	5.3e-31	98.5
WP_000023174.1\|3113617_3115468_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	98.7
WP_000935546.1\|3118198_3119248_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	6.8e-199	95.4
WP_000917750.1\|3119398_3119596_-	hypothetical protein	S5MQK8	Escherichia_phage	1.0e-28	98.5
WP_000640048.1\|3119837_3120368_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.3e-72	72.6
WP_001217450.1\|3120376_3120736_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	3.0e-37	63.5
WP_001265026.1\|3120748_3121795_-	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.2e-108	54.2
WP_001417850.1\|3121796_3122075_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.6e-11	46.9
WP_001302544.1\|3122015_3122201_+	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|3122242_3122398_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_024248495.1\|3122469_3123558_+\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.0e-08	23.8
WP_001278454.1\|3123744_3123849_-	hypothetical protein	NA	NA	NA	NA
WP_000207986.1\|3123964_3124834_-	DUF551 domain-containing protein	A0A1U9AJ59	Stx1_converting_phage	5.2e-120	76.8
WP_000224233.1\|3124844_3125108_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
WP_042350895.1\|3125109_3125274_-	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	2.0e-17	90.7
WP_101972958.1\|3125358_3125571_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	4.4e-33	94.3
WP_000403777.1\|3125621_3125978_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	3.0e-58	98.3
WP_101972959.1\|3125955_3126417_-	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	3.4e-38	92.9
WP_001266134.1\|3126413_3126710_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	3.4e-47	94.7
WP_001151153.1\|3126706_3127129_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.1e-64	92.1
WP_001262389.1\|3127169_3128240_-	hypothetical protein	A0A088CD36	Shigella_phage	3.2e-63	65.2
WP_000693949.1\|3128311_3128737_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000471549.1\|3128733_3128949_-	transcriptional regulator	NA	NA	NA	NA
WP_000103686.1\|3128998_3129715_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	3.8e-52	42.0
WP_000379580.1\|3129987_3130140_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.9e-07	53.2
WP_000394557.1\|3130151_3130526_+	hypothetical protein	NA	NA	NA	NA
WP_000449192.1\|3131054_3131243_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001090200.1\|3131239_3131431_+	DUF1482 family protein	NA	NA	NA	NA
WP_101972960.1\|3131523_3133995_+	exonuclease	K7PLW7	Enterobacteria_phage	5.0e-59	61.2

DBSCAN-SWA_11

3227345 : 3316039

Salmonella_phage(57.63%)

portal,integrase,capsid,lysis,tRNA,tail,head,terminase,protease,plate

attL 3220308:3220323|attR 3318984:3318999

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3220308:3220323	attL	NA	NA	NA	NA
WP_000886683.1\|3227345_3228638_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000067755.1\|3228728_3230072_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_001295343.1\|3230082_3230694_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000077038.1\|3230848_3234838_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_000228473.1\|3234972_3235467_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_053887426.1\|3236011_3236992_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	8.6e-63	44.6
WP_001043578.1\|3237098_3238865_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	7.0e-23	24.3
WP_101972962.1\|3238865_3240587_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.9e-20	25.2
WP_001241676.1\|3240628_3241333_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3241617_3241836_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_000934041.1\|3242872_3245149_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_000520781.1\|3245179_3245500_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000410785.1\|3245822_3246047_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000188140.1\|3246119_3248066_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
WP_000746460.1\|3248062_3249178_-	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_001380339.1\|3249328_3250285_+	DUF535 domain-containing protein	NA	NA	NA	NA
WP_000599802.1\|3250281_3251940_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_001298299.1\|3252364_3253060_+	aquaporin Z	NA	NA	NA	NA
WP_001338421.1\|3253554_3254454_+	L-lysine exporter LysO	NA	NA	NA	NA
WP_000458809.1\|3254597_3256250_+	hydroxylamine reductase	NA	NA	NA	NA
WP_000178677.1\|3256261_3257230_+	NADH oxidoreductase	NA	NA	NA	NA
WP_000815362.1\|3257362_3259081_+	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.2e-31	24.0
WP_000566372.1\|3259117_3260119_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_001136577.1\|3260129_3261560_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_001338420.1\|3261658_3262672_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001255168.1\|3262668_3263499_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
WP_001160737.1\|3263495_3263819_-	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_001270734.1\|3263944_3264460_+	lipoprotein	NA	NA	NA	NA
WP_000027213.1\|3264677_3265406_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	4.6e-29	37.1
WP_000756569.1\|3265423_3266155_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001001691.1\|3266161_3266878_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_000464491.1\|3266877_3267546_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_001295339.1\|3267836_3268568_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001149767.1\|3268766_3269894_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	6.0e-28	27.0
WP_000389260.1\|3269934_3270423_-	YbjO family protein	NA	NA	NA	NA
WP_001061658.1\|3270482_3271328_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_001093854.1\|3271324_3272278_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_000996005.1\|3272287_3273421_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.4e-29	34.0
WP_000126073.1\|3273515_3274628_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_000203025.1\|3274978_3275455_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_000684321.1\|3275542_3276445_-	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
WP_000189159.1\|3276505_3277228_-	nitroreductase NfsA	NA	NA	NA	NA
WP_001201560.1\|3277211_3277499_-	DUF1418 family protein	NA	NA	NA	NA
WP_001195225.1\|3277658_3277916_+	glutaredoxin 1	A0A2I7SAE2	Vibrio_phage	3.0e-23	61.9
WP_000681108.1\|3277945_3278323_-	hypothetical protein	NA	NA	NA	NA
WP_001024876.1\|3278592_3280278_+	aspartate:alanine antiporter	NA	NA	NA	NA
WP_000972391.1\|3280513_3280732_-	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_024220389.1\|3280822_3281923_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	2.9e-176	87.7
WP_073535284.1\|3281919_3282405_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	2.2e-67	81.2
WP_073535285.1\|3282401_3285479_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	63.0
WP_001513105.1\|3285471_3285591_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.2e-13	84.6
WP_001281009.1\|3285605_3285908_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
WP_001207660.1\|3285962_3286478_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_033562314.1\|3286487_3287660_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.3e-203	90.3
WP_033562313.1\|3287802_3288369_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	2.2e-87	86.8
WP_130723473.1\|3288396_3288810_+\|tail	phage tail protein	A0A0F7LBW5	Escherichia_phage	1.3e-09	35.6
WP_089562725.1\|3288811_3289252_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.1e-38	66.4
WP_089562726.1\|3289223_3289826_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	5.0e-98	89.9
WP_094249485.1\|3289825_3291325_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	4.0e-237	83.8
WP_064529899.1\|3291321_3291927_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	2.6e-110	92.5
WP_089551267.1\|3291919_3292828_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.0e-143	90.7
WP_000177590.1\|3292814_3293174_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
WP_101972963.1\|3293170_3293749_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.2e-93	87.0
WP_101972964.1\|3293817_3294264_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-62	84.9
WP_001039939.1\|3294256_3294688_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.5e-72	95.1
WP_021578444.1\|3294783_3295212_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.1e-46	75.9
WP_024235282.1\|3295208_3295586_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	8.8e-16	39.2
WP_001341072.1\|3295587_3296061_-	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
WP_000171568.1\|3296080_3296296_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_000868175.1\|3296299_3296503_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000673520.1\|3296502_3296967_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-76	89.0
WP_001459609.1\|3297062_3297713_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	1.5e-111	95.8
WP_000742511.1\|3297716_3298775_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_000216237.1\|3298791_3299625_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.8e-123	91.0
WP_001098431.1\|3299767_3301534_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_101972965.1\|3301533_3302559_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.3e-170	85.6
WP_001009569.1\|3302611_3302929_-	hypothetical protein	NA	NA	NA	NA
WP_135960113.1\|3302928_3303579_-	hypothetical protein	NA	NA	NA	NA
WP_000752436.1\|3303584_3304280_-	hypothetical protein	NA	NA	NA	NA
WP_029365156.1\|3304672_3306565_-	NTPase KAP	NA	NA	NA	NA
WP_001217575.1\|3306879_3307113_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154431.1\|3307123_3307312_-	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
WP_029365157.1\|3307465_3309880_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.0
WP_101972966.1\|3309876_3310734_-	DNA adenine methylase	E5G6L8	Salmonella_phage	8.6e-160	96.5
WP_000752613.1\|3310730_3310958_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	2.7e-36	100.0
WP_001244165.1\|3310957_3311191_-	DUF2732 family protein	E5G6L6	Salmonella_phage	1.9e-32	97.4
WP_000963472.1\|3311258_3311600_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.3e-55	98.2
WP_023150404.1\|3311563_3311764_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	3.5e-32	97.0
WP_000460901.1\|3311771_3312281_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	1.7e-86	98.2
WP_000188448.1\|3312313_3312535_-	hypothetical protein	NA	NA	NA	NA
WP_000107902.1\|3312630_3313227_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.1e-39	42.4
WP_023150405.1\|3313247_3314924_+	DUF4041 domain-containing protein	A0A142LP25	Marinitoga_camini_virus	5.7e-83	67.0
WP_000290938.1\|3315007_3316039_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.9e-105	56.1
3318984:3318999	attR	NA	NA	NA	NA

DBSCAN-SWA_12

3372617 : 3444386

Enterobacteria_phage(44.9%)

portal,integrase,holin,capsid,lysis,tail,head,terminase,transposase

attL 3382811:3382845|attR 3445820:3445854

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000547191.1\|3372617_3373946_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_101972972.1\|3373744_3375949_+	catecholate siderophore receptor Fiu	NA	NA	NA	NA
WP_000990183.1\|3375990_3376668_+	PKHD-type hydroxylase YbiX	Q5GQB0	Synechococcus_phage	1.2e-18	30.1
WP_000146343.1\|3376741_3377008_+	C4-type zinc finger protein YbiI	E5G6L7	Salmonella_phage	6.9e-07	45.6
WP_000849301.1\|3377272_3377533_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000443530.1\|3377761_3378847_-	malate/lactate/ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_000386551.1\|3378987_3379950_-	DNA-binding protein YbiB	NA	NA	NA	NA
WP_001340191.1\|3379977_3382128_-	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	3.7e-42	26.1
WP_001145126.1\|3382247_3382730_+	N-glycosidase YbiA	A0A0H3TLU0	Faustovirus	9.8e-36	52.0
3382811:3382845	attL	NA	NA	NA	NA
WP_063502032.1\|3382961_3384326_-	ATP-dependent RNA helicase RhlE	A0A1V0SBR7	Catovirus	1.5e-52	31.8
WP_001296991.1\|3384554_3385226_+	DNA-binding transcriptional regulator CecR	NA	NA	NA	NA
WP_053887327.1\|3385228_3386224_+	secretion protein HlyD	NA	NA	NA	NA
WP_101972973.1\|3386216_3387953_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.3e-18	29.8
WP_000070131.1\|3387945_3389079_+	ABC transporter permease	NA	NA	NA	NA
WP_000469031.1\|3389089_3390196_+	ABC transporter permease	NA	NA	NA	NA
WP_000871982.1\|3390157_3390568_-	hypothetical protein	NA	NA	NA	NA
WP_001113347.1\|3390700_3391462_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000650318.1\|3391458_3392700_+	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_000045450.1\|3392699_3393656_+	UPF0104 family protein	NA	NA	NA	NA
WP_000446895.1\|3393691_3394405_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_000373627.1\|3394609_3395314_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_000852290.1\|3395449_3395902_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
WP_000598619.1\|3395903_3396149_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
WP_000080885.1\|3396141_3396627_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_000084639.1\|3396629_3397142_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
WP_001340186.1\|3397163_3398153_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_001295302.1\|3398549_3399458_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	1.4e-27	31.1
WP_000042533.1\|3399649_3401671_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_000044843.1\|3402249_3402927_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_000246761.1\|3402919_3403675_-	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA
WP_000118797.1\|3403661_3404816_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_101972974.1\|3404812_3405853_-	biotin synthase BioB	NA	NA	NA	NA
WP_072024508.1\|3405939_3407229_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	3.8e-18	28.6
WP_000767389.1\|3407287_3407764_+	kinase inhibitor	NA	NA	NA	NA
WP_101972975.1\|3408509_3409841_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.4e-20	37.1
WP_001657981.1\|3409914_3410499_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.1e-102	94.3
WP_101972976.1\|3410498_3413846_-	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	1.8e-11	35.5
WP_001619152.1\|3413910_3414510_-	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	2.8e-109	98.5
WP_101972977.1\|3414576_3418059_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.6
WP_000090894.1\|3418119_3418752_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.0e-96	99.0
WP_000194780.1\|3418688_3419432_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_101972957.1\|3419437_3420136_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-133	99.6
WP_000847379.1\|3420135_3420465_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_053900208.1\|3420461_3423023_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	91.1
WP_000459457.1\|3423015_3423450_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_101972978.1\|3423431_3423854_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	3.3e-72	98.6
WP_024198747.1\|3423869_3424610_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	4.3e-131	98.4
WP_032316772.1\|3424617_3425013_-	hypothetical protein	A0A2R9YJI2	Escherichia_phage	1.9e-69	98.5
WP_000975081.1\|3425009_3425588_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
WP_000785282.1\|3425599_3425953_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
WP_077483093.1\|3425964_3426360_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.0e-55	92.4
WP_049025584.1\|3426401_3427427_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	5.8e-187	96.8
WP_101972979.1\|3427482_3427815_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	4.2e-54	98.2
WP_000123305.1\|3427824_3429144_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	2.5e-235	99.3
WP_101972980.1\|3429124_3430726_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	7.2e-309	98.9
WP_000198149.1\|3430722_3430929_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_097497873.1\|3430925_3432851_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
WP_000453611.1\|3432825_3433371_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
WP_001663509.1\|3433759_3433993_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
WP_000079508.1\|3434049_3434460_+	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_001283921.1\|3434746_3435004_-	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
WP_095762192.1\|3435000_3435327_-	DNA-binding protein	A0A220NRM9	Escherichia_phage	1.0e-57	100.0
WP_095762191.1\|3435245_3435497_-	KilA-N domain-containing protein	A0A0P0ZBU2	Stx2-converting_phage	3.3e-27	100.0
WP_001619137.1\|3435701_3436139_-\|lysis	lysis protein	K7P7F7	Enterobacteria_phage	3.0e-68	95.9
WP_001197767.1\|3436135_3436612_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.9e-84	95.5
WP_001120502.1\|3436615_3436951_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.2e-60	100.0
WP_095762190.1\|3437027_3438080_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	7.0e-204	97.7
WP_032192725.1\|3438229_3438424_-	hypothetical protein	Q8SBE3	Shigella_phage	3.7e-26	93.8
WP_095762509.1\|3438998_3440081_+	porin	Q1MVN1	Enterobacteria_phage	2.0e-166	80.3
WP_001204774.1\|3440269_3440653_-	antitermination protein QuuD	A0A088CD47	Shigella_phage	5.2e-56	83.3
WP_032270810.1\|3440738_3440879_-	YlcG family protein	K7PHH3	Enterobacteria_phage	4.2e-08	67.4
WP_095762513.1\|3440875_3441238_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	9.5e-60	95.7
WP_000950954.1\|3441257_3441452_-	protein ninF	NA	NA	NA	NA
WP_000386643.1\|3441444_3441786_-	DUF2591 family protein	Q76H72	Enterobacteria_phage	1.6e-61	96.5
WP_085947970.1\|3441951_3443164_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_000533645.1\|3443315_3444386_+\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	1.5e-201	99.7
3445820:3445854	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3907803 : 3969836

Shigella_phage(54.84%)

portal,integrase,holin,capsid,tail,head,terminase,plate,protease,transposase

attL 3924543:3924589|attR 3965934:3965980

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087899328.1\|3907803_3909077_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_120795374.1\|3909298_3909373_-	protein YahV	NA	NA	NA	NA
WP_000131044.1\|3909678_3911712_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|3911840_3912428_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_000089110.1\|3912441_3913914_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159095.1\|3913927_3915598_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_001209100.1\|3915810_3916479_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|3916721_3917417_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023927.1\|3917409_3918837_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102108.1\|3918847_3919567_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000339594.1\|3920093_3920948_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001046307.1\|3921173_3922499_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
3924543:3924589	attL	NA	NA	NA	NA
WP_101973002.1\|3925165_3926500_+	FRG domain-containing protein	Q9AZ51	Lactococcus_phage	2.6e-06	34.1
WP_077890891.1\|3926701_3928192_+	ATP-binding protein	NA	NA	NA	NA
WP_089578513.1\|3928181_3928799_+	hypothetical protein	NA	NA	NA	NA
WP_072644925.1\|3929133_3929688_-	site-specific DNA recombinase	A0A0F7LA37	Escherichia_phage	1.7e-87	87.3
WP_101973003.1\|3929718_3930207_+\|tail	tail fiber protein	M1TAS6	Escherichia_phage	4.8e-83	99.3
WP_000368070.1\|3930206_3930809_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	5.9e-107	98.5
WP_001045290.1\|3930780_3931224_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	3.3e-22	46.4
WP_101973004.1\|3931228_3931909_-	hypothetical protein	U5P0I1	Shigella_phage	4.6e-63	62.2
WP_024228552.1\|3931912_3932497_-	YmfQ family protein	O22003	Shigella_phage	2.4e-113	99.5
WP_101973005.1\|3932487_3933546_-\|plate	baseplate J/gp47 family protein	U5P424	Shigella_phage	1.8e-199	98.3
WP_000424728.1\|3933532_3933958_-	hypothetical protein	U5P0R9	Shigella_phage	1.5e-80	99.3
WP_001259088.1\|3933957_3934506_-\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	3.3e-96	98.4
WP_000999527.1\|3934505_3935585_-\|plate	baseplate protein	U5P0H6	Shigella_phage	6.9e-207	99.7
WP_044722826.1\|3935581_3936910_-	DNA circularization protein	Q8SBG8	Shigella_phage	1.2e-245	98.6
WP_101973006.1\|3936970_3938806_-\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	1.7e-306	99.5
WP_000661047.1\|3938947_3939217_-\|tail	phage tail assembly protein	S5FNR3	Shigella_phage	3.5e-43	100.0
WP_000090998.1\|3939216_3939573_-	hypothetical protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_101973007.1\|3939572_3941069_-\|tail	phage tail protein	S5FKL0	Shigella_phage	3.5e-273	97.6
WP_000497757.1\|3941052_3941223_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	2.7e-25	98.2
WP_000779279.1\|3941231_3941792_-	hypothetical protein	M1FQV7	Enterobacteria_phage	2.3e-105	99.5
WP_000213502.1\|3941788_3942295_-	hypothetical protein	M1FPE2	Enterobacteria_phage	1.7e-91	100.0
WP_024234445.1\|3942269_3942680_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	1.5e-74	99.3
WP_101973008.1\|3942676_3943000_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	2.8e-55	97.2
WP_000601365.1\|3943002_3943203_-	hypothetical protein	S5FNU1	Shigella_phage	3.4e-27	100.0
WP_000257507.1\|3943251_3944457_-\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.8e-224	100.0
WP_001193631.1\|3944471_3945122_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.5e-119	100.0
WP_000466255.1\|3945099_3946341_-\|portal	phage portal protein	U5P411	Shigella_phage	2.0e-242	99.8
WP_000605613.1\|3946340_3946523_-	hypothetical protein	M1FJ83	Enterobacteria_phage	1.1e-24	96.7
WP_143370350.1\|3946534_3948031_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	6.3e-299	99.2
WP_000929175.1\|3948264_3948759_-\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	3.9e-88	99.4
WP_101973009.1\|3948884_3949235_-	HNH endonuclease	Q8SBD7	Shigella_phage	7.5e-62	96.6
WP_001089762.1\|3949385_3949721_+	hypothetical protein	NA	NA	NA	NA
WP_063501624.1\|3949821_3950391_+	hypothetical protein	NA	NA	NA	NA
WP_001356320.1\|3950554_3950947_-	DUF2570 domain-containing protein	U5P0U9	Shigella_phage	9.3e-53	87.6
WP_027661775.1\|3950930_3951407_-	glycoside hydrolase family 104 protein	S5FV07	Shigella_phage	2.3e-85	96.2
WP_101973010.1\|3951410_3951746_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	4.4e-59	98.2
WP_000799659.1\|3951823_3952876_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	6.8e-207	99.1
WP_000917724.1\|3953026_3953230_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_001433853.1\|3953490_3954519_+	hypothetical protein	S5FNT5	Shigella_phage	3.3e-113	57.6
WP_000623433.1\|3954526_3955102_+	hypothetical protein	S5FXQ0	Shigella_phage	3.6e-61	64.4
WP_001205463.1\|3955094_3955457_-	antitermination protein Q	A0A0P0ZCW0	Stx2-converting_phage	6.4e-56	89.1
WP_021530631.1\|3955474_3956464_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.5e-195	99.7
WP_001061449.1\|3956471_3957281_-	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.2e-150	99.3
WP_000767105.1\|3957300_3957690_-	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	2.1e-68	99.2
WP_000210170.1\|3957686_3958013_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_021576995.1\|3958009_3958663_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.6e-126	98.6
WP_101973011.1\|3958662_3959157_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.2e-86	98.8
WP_000104972.1\|3959153_3960095_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	8.6e-153	99.7
WP_001250269.1\|3960084_3960264_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_101973012.1\|3960439_3960991_-	protein YmfL	S5FXP0	Shigella_phage	1.7e-100	98.9
WP_000649477.1\|3961034_3961235_-	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
WP_000848748.1\|3961325_3962000_+	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
WP_001083098.1\|3962171_3962375_+	hypothetical protein	A0A1C9II97	Salmonella_phage	2.0e-14	75.5
WP_001514782.1\|3962383_3962659_+	hypothetical protein	Q8SBF7	Shigella_phage	7.0e-47	97.8
WP_000008235.1\|3963335_3963872_+	5'-deoxynucleotidase	S5MW55	Escherichia_phage	8.2e-100	98.9
WP_001242749.1\|3963862_3964225_+	phage protein	U5P092	Shigella_phage	2.1e-67	100.0
WP_000206732.1\|3964224_3964530_+	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
WP_000433939.1\|3964529_3964880_+	helix-turn-helix domain-containing protein	U5P4J3	Shigella_phage	4.9e-61	100.0
WP_000051887.1\|3964756_3965920_+\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_000893279.1\|3966124_3967378_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.2e-95	47.0
3965934:3965980	attR	NA	NA	NA	NA
WP_001285288.1\|3967389_3968493_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000749863.1\|3968780_3969836_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	9.1e-119	61.1

DBSCAN-SWA_14

4223732 : 4307270

Enterobacteria_phage(50.79%)

portal,integrase,holin,capsid,tRNA,tail,lysis,head,terminase

attL 4244784:4244799|attR 4314666:4314681

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223181.1\|4223732_4224419_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001303782.1\|4224818_4224959_-	hypothetical protein	NA	NA	NA	NA
WP_001194358.1\|4225054_4225771_+	two-component system response regulator ArcA	NA	NA	NA	NA
WP_000920337.1\|4225830_4227183_-	cell envelope integrity protein CreD	NA	NA	NA	NA
WP_001219614.1\|4227240_4228665_-	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	1.6e-09	20.4
WP_001188663.1\|4228664_4229354_-	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
WP_000875487.1\|4229366_4229840_-	protein CreA	NA	NA	NA	NA
WP_000371666.1\|4230050_4230920_+	MDR efflux pump AcrAB transcriptional activator RobA	NA	NA	NA	NA
WP_000942344.1\|4230916_4231564_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB	NA	NA	NA	NA
WP_001341279.1\|4231615_4232137_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA
WP_000068679.1\|4232221_4232548_-	trp operon repressor	NA	NA	NA	NA
WP_000409442.1\|4232637_4234575_-	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	4.0e-11	34.8
WP_000046749.1\|4234785_4236453_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.7e-42	26.4
WP_000093813.1\|4236759_4237992_-	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	A0A0C5K935	Enterococcus_phage	2.1e-82	42.6
WP_001029698.1\|4238012_4239395_-	DNA repair protein RadA	NA	NA	NA	NA
WP_001132956.1\|4239443_4240412_-	phosphoserine phosphatase	NA	NA	NA	NA
WP_000124615.1\|4240517_4241162_+	YtjB family periplasmic protein	NA	NA	NA	NA
WP_000105851.1\|4241189_4242206_+	lipoate--protein ligase LplA	NA	NA	NA	NA
WP_000566141.1\|4242237_4242501_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000224879.1\|4242661_4243381_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_101973021.1\|4243437_4244661_-	phosphopentomutase	NA	NA	NA	NA
WP_000477811.1\|4244712_4246035_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.3e-79	39.8
4244784:4244799	attL	NA	NA	NA	NA
WP_001295412.1\|4246161_4246941_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_001143237.1\|4247198_4248749_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_032200579.1\|4248720_4249584_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
WP_000563058.1\|4249898_4250681_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_001543400.1\|4250677_4251751_-	patatin family protein	NA	NA	NA	NA
WP_000490275.1\|4251872_4252034_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2
WP_001295748.1\|4252160_4252766_-	molecular chaperone OsmY	NA	NA	NA	NA
WP_000202563.1\|4253158_4254745_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	2.4e-30	25.2
WP_001217539.1\|4254964_4255213_+	DinI family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_015987614.1\|4255320_4255893_-	cytolethal distending toxin type I subunit CdtC	A5LH54	Enterobacteria_phage	2.8e-106	100.0
WP_000734593.1\|4255889_4256711_-	cytolethal distending toxin type I nuclease subunit CdtB	A5LH53	Enterobacteria_phage	1.5e-153	100.0
WP_000358619.1\|4256707_4257421_-	cytolethal distending toxin type I subunit CdtA	A5LH52	Enterobacteria_phage	2.9e-137	100.0
WP_122995517.1\|4257894_4257963_-	hypothetical protein	NA	NA	NA	NA
WP_052931319.1\|4258652_4259504_-	type III secretion system effector Cif	A5LH49	Enterobacteria_phage	8.3e-155	99.6
WP_052931318.1\|4259727_4260609_-	hypothetical protein	A5LH48	Enterobacteria_phage	5.0e-163	99.7
WP_001023428.1\|4260715_4260985_-\|tail	phage tail protein	Q9EYE9	Enterobacteria_phage	2.4e-44	98.9
WP_101973022.1\|4260986_4262300_-\|tail	phage tail protein	H6WZM9	Escherichia_phage	3.4e-75	97.0
WP_021580692.1\|4262364_4262964_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	5.0e-106	95.5
WP_096912371.1\|4263031_4266427_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	89.5
WP_052931387.1\|4266487_4267090_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.5e-89	85.1
WP_064759399.1\|4267026_4267770_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.0e-149	98.0
WP_052913732.1\|4267774_4268473_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.0e-131	97.8
WP_000847401.1\|4268472_4268802_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	6.0e-53	92.7
WP_101973023.1\|4268798_4271360_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	88.4
WP_032329097.1\|4271352_4271778_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	8.3e-63	99.2
WP_032329098.1\|4271759_4272182_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.4e-70	96.4
WP_032330267.1\|4272197_4272938_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	4.0e-129	96.7
WP_032330264.1\|4272945_4273341_-	hypothetical protein	A0A0K2FIF4	Enterobacteria_phage	4.2e-69	96.9
WP_032330265.1\|4273337_4273916_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.1e-78	97.4
WP_101973024.1\|4273927_4274281_-\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	6.9e-39	65.8
WP_000201526.1\|4274273_4274648_-	hypothetical protein	NA	NA	NA	NA
WP_000522628.1\|4274700_4275729_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.3e-114	61.0
WP_101973025.1\|4275786_4276134_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.5e-22	58.1
WP_101973026.1\|4276170_4277676_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	54.0
WP_101973027.1\|4277665_4279258_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.5e-184	61.1
WP_000258991.1\|4279254_4279461_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	4.2e-12	60.0
WP_101972865.1\|4279444_4281373_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	3.6e-262	66.4
WP_000235436.1\|4281344_4281854_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001443307.1\|4282248_4282443_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	3.3e-27	98.4
WP_000881324.1\|4282630_4283248_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	1.5e-92	85.9
WP_032330226.1\|4283397_4283835_-\|lysis	lysis protein	K7P6J0	Enterobacteria_phage	1.8e-68	95.2
WP_059242542.1\|4283831_4284365_-	lysozyme	K7PLY1	Enterobacteria_phage	7.4e-101	97.2
WP_001315200.1\|4284470_4284743_+	hypothetical protein	NA	NA	NA	NA
WP_101973076.1\|4284708_4284909_-	DUF1327 domain-containing protein	Q08JA0	Stx2-converting_phage	1.8e-15	65.5
WP_101973028.1\|4286161_4286365_-	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	5.7e-22	83.1
WP_001382056.1\|4286369_4286585_-\|holin	holin	A0A0P0ZC45	Stx2-converting_phage	1.0e-32	97.2
WP_101973029.1\|4286806_4288657_-	SASA family carbohydrate esterase	B6DZ89	Enterobacteria_phage	0.0e+00	93.7
WP_052913711.1\|4288821_4289871_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.8e-205	99.1
WP_000917724.1\|4290021_4290225_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_052931289.1\|4290477_4291230_-	antitermination protein	Q8SBE4	Shigella_phage	5.3e-137	98.8
WP_064758716.1\|4291243_4292233_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.6e-194	99.1
WP_052914030.1\|4292240_4293050_-	KilA-N domain-containing protein	A5LH75	Enterobacteria_phage	1.4e-151	99.3
WP_032330024.1\|4293455_4293782_-	LexA family transcriptional regulator	A5LH73	Enterobacteria_phage	2.9e-52	97.2
WP_072131177.1\|4293781_4294276_-	PerC family transcriptional regulator	K7PJR0	Enterobacteria_phage	5.6e-87	98.8
WP_000061525.1\|4294272_4295091_-	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	1.2e-121	99.6
WP_000620696.1\|4295087_4295312_-	hypothetical protein	A5LH70	Enterobacteria_phage	5.7e-39	100.0
WP_052914027.1\|4295308_4296457_-	peptidase	A5LH69	Enterobacteria_phage	3.3e-207	97.4
WP_000526665.1\|4296453_4297005_-	hypothetical protein	Q8SBF4	Shigella_phage	1.7e-100	99.5
WP_052914026.1\|4296997_4297258_-	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	3.5e-40	98.8
WP_001020632.1\|4297355_4298048_+	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.5
WP_000135682.1\|4298749_4299112_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_052931290.1\|4299177_4300002_+	DUF2303 family protein	U5P439	Shigella_phage	3.9e-149	99.3
WP_000008183.1\|4300130_4300667_+	5'-deoxynucleotidase	K7PKJ9	Enterobacteria_phage	3.7e-100	98.9
WP_001242723.1\|4300657_4301020_+	phage protein	U5P092	Shigella_phage	4.4e-65	95.8
WP_000206803.1\|4301019_4301640_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	2.2e-112	91.3
WP_052913475.1\|4302036_4305864_-	hypothetical protein	NA	NA	NA	NA
WP_001218277.1\|4306046_4307270_-\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	4.0e-235	98.5
4314666:4314681	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP024133

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59 : 54461

Escherichia_phage(26.67%)

protease,integrase,transposase

attL 6:65|attR 39255:40564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6:65	attL	NA	NA	NA	NA
WP_085947970.1\|59_1272_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_001490748.1\|1357_1672_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_000770132.1\|2254_4915_+	peptidase M66	NA	NA	NA	NA
WP_001368871.1\|4998_5874_+	type II secretion system protein GspC	NA	NA	NA	NA
WP_013009342.1\|5874_7845_+	variant type II secretion system secretin EtpD	A7BJX1	Enterobacteria_phage	2.0e-26	27.6
WP_001418198.1\|7841_9344_+	type II secretion system ATPase GspE	NA	NA	NA	NA
WP_001173149.1\|9345_10569_+	type II secretion system inner membrane protein GspF	NA	NA	NA	NA
WP_001231213.1\|10599_11034_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_000082928.1\|11030_11582_+	type II secretion system minor pseudopilin GspH	NA	NA	NA	NA
WP_001420206.1\|11596_11944_+	type II secretion system minor pseudopilin GspI	NA	NA	NA	NA
WP_000082784.1\|11940_12540_+	type II secretion system minor pseudopilin GspJ	NA	NA	NA	NA
WP_000842183.1\|12536_13514_+	type II secretion system minor pseudopilin GspK	NA	NA	NA	NA
WP_071526091.1\|13552_14725_+	type II secretion system protein GspL	NA	NA	NA	NA
WP_000998852.1\|14711_15227_+	type II secretion system protein M	NA	NA	NA	NA
WP_000088802.1\|15278_16112_+	prepilin peptidase	NA	NA	NA	NA
WP_001222320.1\|16205_16607_+	GspS family T2SS pilot lipoprotein variant EptO	NA	NA	NA	NA
WP_000083841.1\|17717_17966_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_001132900.1\|19049_19301_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_000222766.1\|19297_19585_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	5.8e-20	50.5
WP_101973080.1\|19861_21075_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.5e-165	97.0
WP_001045657.1\|21701_25604_+	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	1.4e-220	38.5
WP_085949156.1\|26060_27274_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6
WP_001312823.1\|27457_27616_+\|transposase	transposase	NA	NA	NA	NA
WP_001332050.1\|28395_28785_-\|protease	outer membrane protease	NA	NA	NA	NA
WP_000280980.1\|28888_29842_+\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_087899328.1\|29979_31253_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_014640565.1\|32386_32575_+	hypothetical protein	NA	NA	NA	NA
WP_001066954.1\|32695_33436_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.2e-24	57.6
WP_000361611.1\|33720_34698_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	4.6e-101	63.9
WP_101973083.1\|38497_39283_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.7e-136	98.4
WP_085947970.1\|39308_40521_+\|transposase	IS3 family transposase	H6WZH1	Escherichia_phage	2.9e-169	100.0
WP_000949004.1\|40949_41864_+	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
39255:40564	attR	NA	NA	NA	NA
WP_000983710.1\|41863_42691_+	iron/manganese ABC transporter ATP-binding protein SitB	A0A1M7XV31	Cedratvirus	3.6e-14	27.0
WP_000992806.1\|42687_43545_+	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000968139.1\|43541_44399_+	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_001238646.1\|46947_48114_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.6e-228	99.7
WP_000817028.1\|48113_49085_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	8.8e-169	96.6
WP_000092896.1\|53016_53229_+	hypothetical protein	NA	NA	NA	NA
WP_000082154.1\|53489_54461_-\|transposase	IS110-like element ISEc32 family transposase	Q75QL1	Wolbachia_phage	1.1e-25	32.1

DBSCAN-SWA_2

103185 : 129623

Escherichia_phage(38.46%)

protease,integrase,transposase

attL 96137:96154|attR 130586:130603

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
96137:96154	attL	NA	NA	NA	NA
WP_000616800.1\|103185_103839_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000557619.1\|103931_104189_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_001398199.1\|104121_104523_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_001262766.1\|104807_106580_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_000427620.1\|107516_108521_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_000429836.1\|108599_109034_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294663.1\|109105_109456_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_000732292.1\|109469_109745_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001340589.1\|109780_110203_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000105636.1\|110254_111949_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001277456.1\|111966_112329_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|112325_112562_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000204520.1\|112558_113266_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000935452.1\|113304_114609_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001067855.1\|114655_115360_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011264039.1\|115432_115672_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_000612791.1\|115817_116681_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_001354008.1\|116718_116964_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|117432_118224_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_032482493.1\|119559_120531_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	2.4e-49	38.1
WP_001067858.1\|121520_122225_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_074172008.1\|122279_122510_+	umuDC operon-like protein	I6S1S3	Salmonella_phage	1.3e-14	58.8
WP_000457559.1\|122509_123781_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	4.9e-151	64.0
WP_006797589.1\|123862_124840_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	5.0e-87	54.1
WP_000368714.1\|124836_126042_-	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
WP_000339857.1\|126456_126726_+	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|126902_127769_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_000764642.1\|128531_128789_+	hypothetical protein	NA	NA	NA	NA
WP_000015958.1\|128846_129623_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
130586:130603	attR	NA	NA	NA	NA

DBSCAN-SWA_3

140936 : 153400

Enterobacteria_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011251357.1\|140936_144083_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	1.2e-60	22.4
WP_000758221.1\|144169_144610_+	hypothetical protein	NA	NA	NA	NA
WP_001398208.1\|144707_147185_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	2.9e-83	35.4
WP_000843496.1\|147225_147423_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_000287499.1\|147456_148194_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.9
WP_000027057.1\|148418_149279_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_014343468.1\|149461_149935_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
WP_001067858.1\|149985_150690_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001516695.1\|150961_151618_-	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA
WP_086525284.1\|152695_153400_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	5.3e-139	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024131

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP024133

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection