CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015497	Lactobacillus helveticus strain FAM8105 plasmid pFAM8105, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP015496	Lactobacillus helveticus strain FAM8105 chromosome, complete genome	3 crisprs	cas14j,cas3,csa3,cas2,cas14k,cas5,cas8c,cas7,cas4,cas1,DEDDh,DinG,Cas14u_CAS-V	0	5	20	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015496_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015496_1

601821-603718

TypeI

I-C

Consensus_repeat	Method
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CRT

28 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cas14k

The CRISPR arrays of NZ_CP015496_1

>merge|NZ_CP015496|1|601821-603718|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAATATTGATAAAAGACTGATACATGTGGCGAGTAACCTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAAGACGTGTGAATGGTCAATGGATCTTGTACAAGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGTATTCCAGCCAAAGCAGATGGCTTTGCCACCTAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACCGGTGAATCGTAAATGTTAATCGAGCCACCAGCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATATGAATTCCTTGGCTAGGGCTTTGAGCACTGAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTTCTACTGGTTTACCATCTGGGTTTCCTGATCTTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTGCAGAAGGTTAACAAACTTAAGCCAGATTATCTTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAGTGACGTGCCATCAGTTAACCAAAAATGTACCTAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCATTGACTGTTAGTGTCAATGAGATGGATTTAAAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAATTAAGTATAATCATAGGGGCAATAATTGCTTATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATAGCGCTATTAACAAACAAGTTATGCAACCGCTTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTTTGACTTTTGCTTGTTACGACTAATCAGGAAAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATATGCGTCAGTTTCGCTTTCATGGTTAAAGCATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACTAATGGAATATCCTTCATGCGCAAGCCTGTAAAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTTAGTGAACAAACTCCGTTGCGATACCGTCACTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTAAAATACAGTTGACTTTTTAGAAGATTTAAGTAAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTAATATCTGTGAAGCAAACAAGGATCACTTCCTTGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTAAACGCCTACAAAGAACGTCACAATGCAAACAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCCATTAAATAATCATTACTTGTATTAAATAAAGTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATCAAAGCTATCCTGCTATTGCTGATGGCTGGTGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAGTTTTTGAACGCAATTCATTACCCGGTTTTTTCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACTAATGAAGTAATCAGTAAGGTGTTGGGTTACAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTACTTAGATGCTGAAATGAACTTAGACCCGTGGATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAGGATATTGACGGTACTGTGTTTGAAGTTTTCGGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTA

>NZ_CP015496|1|1|601821-603652|PILER-CR
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTGATAAAAGACTGATACATGTGGCGAGTAACCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CATTGACTGTTAGTGTCAATGAGATGGATTTAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AATTAAGTATAATCATAGGGGCAATAATTGCTTAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTAGTGAACAAACTCCGTTGCGATACCGTCACT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTAAACGCCTACAAAGAACGTCACAATGCAAACA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CCATTAAATAATCATTACTTGTATTAAATAAAGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT

>NZ_CP015496|1|1|601821-603652|CRISPRCasFinder
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTGATAAAAGACTGATACATGTGGCGAGTAACCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CATTGACTGTTAGTGTCAATGAGATGGATTTAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AATTAAGTATAATCATAGGGGCAATAATTGCTTAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTAGTGAACAAACTCCGTTGCGATACCGTCACT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTAAACGCCTACAAAGAACGTCACAATGCAAACA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CCATTAAATAATCATTACTTGTATTAAATAAAGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT

>NZ_CP015496|1|1|601821-603718|CRT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTGATAAAAGACTGATACATGTGGCGAGTAACCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CATTGACTGTTAGTGTCAATGAGATGGATTTAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AATTAAGTATAATCATAGGGGCAATAATTGCTTAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTAGTGAACAAACTCCGTTGCGATACCGTCACT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTAAACGCCTACAAAGAACGTCACAATGCAAACA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CCATTAAATAATCATTACTTGTATTAAATAAAGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGT
GTCGCACTCCTTGTGATGCACTTGTGGGTGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015496.1\|WP_012212140.1\|588864_589179_+\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_CP015496.1\|WP_012212134.1\|598820_599672_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP015496.1\|WP_023190881.1\|607815_608418_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP015496.1\|WP_012212136.1\|596101_596845_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP015496.1\|WP_012212129.1\|611452_613387_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NZ_CP015496.1\|WP_041810730.1\|614199_614730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015496.1\|WP_012212141.1\|587480_588458_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375122
NZ_CP015496.1\|WP_012212133.1\|599674_600331_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP015496.1\|WP_101853791.1\|615558_616884_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14k	-	gnl\|CDD\|223747
NZ_CP015496.1\|WP_101853789.1\|604316_606980_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP015496.1\|WP_014918447.1\|610253_611162_+\|primosomal-protein-DnaI	unknown	unknown	gnl\|CDD\|236353
NZ_CP015496.1\|WP_101853790.1\|606988_607819_+\|DNA-formamidopyrimidine-glycosylase	unknown	unknown	gnl\|CDD\|234899
NZ_CP015496.1\|WP_023190882.1\|608890_610222_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226138
NZ_CP015496.1\|WP_014563208.1\|601368_601659_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP015496.1\|WP_012212135.1\|596844_598818_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP015496.1\|WP_003629702.1\|589196_590078_+\|SPFH-domain-containing-protein	unknown	unknown	gnl\|CDD\|366488
NZ_CP015496.1\|WP_012212126.1\|614920_615529_+\|IS607-family-transposase	unknown	unknown	gnl\|CDD\|239738
NZ_CP015496.1\|WP_003627138.1\|608420_608888_+\|transcriptional-repressor-NrdR	unknown	unknown	gnl\|CDD\|234774
NZ_CP015496.1\|WP_012212132.1\|600327_601359_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP015496.1\|WP_012212137.1\|593552_596087_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_CP015496.1\|WP_012212140.1\|588864_589179_+\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	9.23975e-10
NZ_CP015496.1\|WP_012212134.1\|598820_599672_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	6.96291e-109
NZ_CP015496.1\|WP_023190881.1\|607815_608418_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.35362e-84
NZ_CP015496.1\|WP_012212136.1\|596101_596845_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.66247e-86
NZ_CP015496.1\|WP_012212129.1\|611452_613387_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP015496.1\|WP_012212141.1\|587480_588458_+\|hypothetical-protein	gnl\|CDD\|375122	pfam17312, Helveticin_J, Bacteriocin helveticin-J. Bacteriocins are biologically active proteins or protein complexes that display a bactericidal mode of action towards closely related species. Bacteriocins produced by lactic acid bacteria are grouped into different classes. Class III of bacteriocins includes large heat liable proteins. Lactobacillus helveticus 481 produces a 37-kDa bacteriocin called helveticin J which is a representative for Clas III bacteriocins.	6.12683e-129
NZ_CP015496.1\|WP_012212133.1\|599674_600331_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	6.87674e-27
NZ_CP015496.1\|WP_101853791.1\|615558_616884_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.27859e-19
NZ_CP015496.1\|WP_101853789.1\|604316_606980_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP015496.1\|WP_014918447.1\|610253_611162_+\|primosomal-protein-DnaI	gnl\|CDD\|236353	PRK08939, PRK08939, primosomal protein DnaI; Reviewed.	1.29781e-152
NZ_CP015496.1\|WP_101853790.1\|606988_607819_+\|DNA-formamidopyrimidine-glycosylase	gnl\|CDD\|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	4.28684e-154
NZ_CP015496.1\|WP_023190882.1\|608890_610222_+\|hypothetical-protein	gnl\|CDD\|226138	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair].	2.45121e-34
NZ_CP015496.1\|WP_014563208.1\|601368_601659_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.68589e-27
NZ_CP015496.1\|WP_012212135.1\|596844_598818_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	2.97564e-90
NZ_CP015496.1\|WP_003629702.1\|589196_590078_+\|SPFH-domain-containing-protein	gnl\|CDD\|366488	pfam01145, Band_7, SPFH domain / Band 7 family. This family has been called SPFH, Band 7 or PHB domain. Recent phylogenetic analysis has shown this domain to be a slipin or Stomatin-like integral membrane domain conserved from protozoa to mammals.	2.55444e-35
NZ_CP015496.1\|WP_012212126.1\|614920_615529_+\|IS607-family-transposase	gnl\|CDD\|239738	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.	1.15975e-49
NZ_CP015496.1\|WP_003627138.1\|608420_608888_+\|transcriptional-repressor-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	6.49925e-87
NZ_CP015496.1\|WP_012212132.1\|600327_601359_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	1.58902e-173
NZ_CP015496.1\|WP_012212137.1\|593552_596087_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	9.72263e-59

>NZ_CP015496.1|WP_014563208.1|601368_601659_+|CRISPR-associated-endonuclease-Cas2
MMVVVSYDINTESKSGQRRLRHVAKICLDYGQRVQNSVFECKVNSMQLELMKERLLDEIDDSQDSLYFFNLGKNYKNRIKSYGIKEVINLESPVIF
>NZ_CP015496.1|WP_012212132.1|600327_601359_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQLLNTLYINTPDSYLSSDGNNVVVKIKNNAVGRLPLQNFEAIVTFGYSGVSPSLMQKCLEQDISISFLSRTGRLKGRVVGEPTGNVYLRKTQFFNSENDAASLLIAKNMIIGKVYNHRWIIERFIRDHGMQIDRDKFKSISENLKNGLKDLQQVDTIDSLRGLEGSLANGYFSVFDDMIINQKDDFFYHGRSRRPPLDRINALLSFSYSLLANECADALTTNGLDPYEGFMHVDRPGRKSLALDLMEELRGVIADRFVLRLVNKKEIHASDFVCKADGAYLLTDDARKSFLAKWQDNKISELEHPFLKEKIEWGLVPFAQAQLLARYLRGDLDEYPPFMWK
>NZ_CP015496.1|WP_012212133.1|599674_600331_+|CRISPR-associated-protein-Cas4
MSYDEKDYLMISGIQHFVFCKRQWALDHIENQWADNYLTVSGNRLHEKADDPYISETRGSKFVVRAMPIHSQEYGLTGIFDVVEFQKDTKGVQVFGKKEKYLPIPVEYKHGKSKIDDSDRLQVLAEAVCLEEMLFCHLDYGYLYYGRTRHREKVEFSEELRTELKKVISEMHYYWEKKYTPKVKVTKKCKSCSLRDICLPELLKRESVSNYISRKLNQ
>NZ_CP015496.1|WP_012212134.1|598820_599672_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MVLSNKIDFKVYVAVHGANPNGDPLNGNRPRQTNDGFGEISDVAIKRKIRNRLQDMGHKIFVQSADRTDDGFKSLKDRADSIDAIKKAAKAKDADKYAEVACKNWMDVRSFGQVFAFKGDKLSVGVRGPVSIQTARSISPIFINEMQITKSVNSTTGDKKSSDTMGMKYSIDFAVYEFGGSINVQLAEKTGFSDDDAESIHKALETLFENDESSARPAGSMEVLRVYWWKHNSKLGQHSPAEMNRAVEIKNNNEPNAPRSLDDIEFIDKTPEDMKENEQIYEG
>NZ_CP015496.1|WP_012212135.1|596844_598818_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MNWISDLAKVYDDNESIAGKAETVSVGKEKTKTVTLVPISHIAVNIPIQINLDKDGGFKGADVIDEKDNQRTIIPATLKSASRSSGSAPMPIDDTLKYIAKDYYPEISNKDKDSHYYSDYINQLKGFVEYVNNKNSSDRVRQQVNAIYTYVSQNDIFADLLFKAHLFGDEIKQVSAIPMKWTGKEEKPAVYKAITGDLDRSFVRFNVRGLGLDRSFEDPDLYEAWGKYYLTTLRNDTGVDYVDCNNDAILTDNHPKGIIPSASNAKLISANDTTNYTFKGRLLNSDEVATIGYLNSQKAHHALRWLIDKQGFSIGGRYYLAWGRKQQNYMIDNQTSPMFKILTSTYNTDQAESYTNERLAKSYYNSLVKGIELNGDNLEDLVYLMQIDTSTPGRADIVSYQALDLNQYIRKLSSWYGKISLFIQNKAGEFVDPPYSLRTIANMIHGSKANDDLKKNTISELISVILGSQIVPRGIIMPLYNKAIRPLSFNPKDPEARFIGWQPIVRLTSKLLKIWYENEGIKAMLNDEINDRSYLYGRLLAVADVLEGDALKNKEVDRPTNAQRYMSAFAQRPADTWKTIYMNAQPYFKQSKGNRRGQILIDHIFDKLQINEENINRLNDPLDGKFLIGYSQQKVDWFRKIREYSEKKQKEQEKGDK
>NZ_CP015496.1|WP_012212136.1|596101_596845_+|type-I-C-CRISPR-associated-protein-Cas5
MLNEIIKSPSFSYKVFGDWALFTDPIMRLGGEKFTYSIPTYQALKGIAESVYWKPTIVIHIDKVRVMKPILVEAKDMRLFKYNNSRSSDLARYTYLKDVEYQVLAHFEFNMNRLDLAKDRNIKKHLAIMKRCIKRGGRRDVFLGTRECQGYVEPCKFGEGEGYYDNSDDRLFGTMFHGFDYPDETGNSMLKARLWNVVMKKGVVDFIRPEDCPVHKPLHELQVKKFKKGENLESVDQLYSQMLEGDS
>NZ_CP015496.1|WP_012212137.1|593552_596087_+|CRISPR-associated-helicase/endonuclease-Cas3
MVGNFIGHTKKLKNNTIETQSLRDHLLNTQKYAEKYASDLSLEHVAGLAGILHDLGKYQSKFQEYIIESTRKGDQSKKGSIDHSSFGAIFLRDFISENFSEKENYYDFLDFGGILENAIFSHHNYLGLKDYINPDLMSPFLNRIEKFKDDEEKKRQLKKCKELFYKDVITEEKFTKYFQLAFDEYEAFISKIRNKVTLKTEQILNENAKNNKQVMLELQAKYFLSEYVYSCLLDADRTDATAFKLSKNPNFSDNTELFEKYYSKLVGKLHKLNKNDNSKINQLRAEISEECDQAAERPSGIYTLSASTGSGKTLTSLRFGLKHAKLYHKKHIIYVLPYITIIEQNSEVIRKFLNDNKDDSQNILEFHSNVSQKVADKSEETTNTLDLTEDSWDSPIIVTTMVQFLDSIFASGTKHRRRFHNLCDSIVIFDEVQKVPIKCLDMFNEAVNFLKNFGNTNVLLCTATQPALEEVKQKLDLNIDHEIIPNLIEHEQQFKRVEFIDKTQNDDGIDLVLNSIQAAELIFKKSQNFKSILGIFNTIDVTKKIYSNLKNKFDSISDQIKLEYLSTNMCPADRKERIKNVLNLVKEGKRVICISTPLIEAGVDASFECVFRSLSGLDSLVQAAGRCNRNNELKLGKVYLLNMDPSEEHIAKLNEVKTGKDQVLELLSEGIKADDFLNANVIKKYFEMFYSKLASTMSYPTNGINLENYIDGIKNVHELAYQSKRKDASKFEKLTQFSGSETIAKYFQVIKNNTKSVLAPYGDKGEKLIADLNGNQDINSLIMLVKDAQPYIVNLYDNKFNQLFEEGDIYTLCQVGNEVIYAFRPYAYNKLVLGDRKQIEKSIF
>NZ_CP015496.1|WP_003629702.1|589196_590078_+|SPFH-domain-containing-protein
MMARIIIGIIVVLVIVYVCCGFKIVPQNNEGLVETLGKYSKTVKAGFIFVWPLFQRIRKVPLALQPLEISKYSIITKDNAEISTSLTLNYLVTDSYRYFYNNTDSVESMVQLIRGHLRDIIGRMDLNAALGSTKEINDQLFTATGDLTDIYGIKVVRVNVDELLPSAEIQHAMDKQLTADREKTAAIAKAEGEARTIGMTTKAKNDALVATAKANAEAVKTQADADAYRVQKMQEALSKAGEGYFRNQSLDSFNQLAQGPNNLIVVGKDEMTDLGKVPTLRKVWDASDDKKDK
>NZ_CP015496.1|WP_012212140.1|588864_589179_+|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MAEKTTGLYVRMNPEKKEKAEAILKKLGLNSATAINMFYDQIILHNGIPFRVEIPNAWDNLDQMNKYEYAKLLDERLNTLNGREDLLGDIAKRLDAEKNEKKDN
>NZ_CP015496.1|WP_012212141.1|587480_588458_+|hypothetical-protein
MVKSITPHLVYRLNGMHHVVAQVGVVNGDHVFALQLLHSAHDVLVYRKHEGLTKNIDYTDPHLVMIGFGHTQTWVPANDKDEYFVGAKPNSGNWTTQIARVKYPRLLPERYTSNTQLPRLSHLNHVTDVPYDGHDHLHRVEASVSPNGKYFMIASIWDDGSGHFGLFDLNEVNQKLNENGTKNTPITDLHCLSAFHIDNFDNPSVAPDEEMPQMIDSVQGYAIDDDKNIYISNQLSPKINHETGEVTTWSRKIVKFPWGETNSDNWQVAMVDGIDLPDRYSEMESIHVNAANDIYLTVAYHQKYIKGGEYKLRTLENQIFHITDL
>NZ_CP015496.1|WP_101853789.1|604316_606980_+|DNA-polymerase-I
MADEKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVDPTHVLVAFDAGKVTFRTKMYGEYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIGTFAAKGEKAGFTTTIVTGDRDLTQLASDKTTVEVTKSGVSKLEAYTPEHMKEVNGVTPSEFIDMKALMGDNSDNYPGVEGIGPKTASNLIQEYGSVENLYDHIDEMKKSKRKERLIRDKEKAFLAKKLATIDRDSPVTIDIDDVKREPVDYEKLRQFYEKMNFRKFLAELNASGAGQDGAEVEKVEYTVLNDDNVKDVKATEKDTVEFYLEMLGANYHLADFVGFSLKINDKIYVSRDVDLLEEDNIKHILEDEKIKKNVFDLKRSMVGAHRLGIHTHGLDYDMLLASYLVNNENNSNDLGEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIESLKKTLLEKLKDHEQDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFAVKLKKLEDKIYGQAGEKFNLNSPKQLGHILFEKLGLPVIKKTKTGYSTSVEVLDQLKTQSPIVSKILDYRQIAKIQSTYVKGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIFSCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLESPDEVTPLMRRHAKAVNFGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIKDYMNKAVQEARDKGYAETIMHRRRYLPDIHAKKYTVRAFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVIQVHDELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
>NZ_CP015496.1|WP_101853790.1|606988_607819_+|DNA-formamidopyrimidine-glycosylase
MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYLLIRLSDNLTIVSHLRMEGKYHLTTSDAHKDKHDHVEFIFTDGTALRYNDVRKFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGLGNIYVDEVLWRTKIHPLSQANKIPAEKVIELHDQINQIITEAIKLQGTTVHSFLNANGQVGGFQSKLQVYGHVGEPCPVCGTKFEKIKVNGRGTTFCPHCQVIYK
>NZ_CP015496.1|WP_023190881.1|607815_608418_+|dephospho-CoA-kinase
MSYVLALTGGIATGKSTADDFFRKKNIPIIDCDQIARELMEPGNASWQAIKDHFGMEYLNSDQTINRKKLGQLVFSNKQALSELNQVTHPLIFDKTVAKIKEYRDFALVILDAPVYFEAGLDKKHVANGVLVITLPEQLQIERLKKRNNLTDQEAINRINSQMPLVEKEKMADFVVANTGTIKELENKLKQILIKIREEE
>NZ_CP015496.1|WP_003627138.1|608420_608888_+|transcriptional-repressor-NrdR
MECPNCHQNASRVIDSRPSDENRAIRRRRECENCGFRFTTFERIETAPLLVIKNDGTREPFNRKKILHGVMAAGQKRPISSDQFEQLVDHVENKVRKQGISEISSKKIGQYVMDELADLDDVAYIRFASIYREFKDMSSFMKTMEDMMAKKGKGN
>NZ_CP015496.1|WP_023190882.1|608890_610222_+|hypothetical-protein
MFETADPKHLYYVANRVRLFPEDEKVLIKLYQPLVGAVAVALYQTLIQNYDPYGIISDSKGIYSLQEQLDCSLKQLFNSLHKLEAVGLVQTFLSDNVFNNVLVFKLLQVPAADKFFATPLLASLLKEKVGVPTFHDLSHAFAQEAKLKEKPIKNAKDVSANFFDVFRLPGDEAITPSSDVVQAAQENKVHEVETAKVNDHGSIDWDFIKQEYSRYQIPASEIDLNKEQIRGLIQTYGLSEKEFVDESLPCLHGSYSLNMRDISNTLAENYKRTNTRENVQAQLNEGRKKALATIKDMDDNDKKLLKAANESSPAEFLYKLKTQKGGITSANEKQIINNLHTQYGLPEDLINILTYTCLTYDTVVSSNLAYKIANDWLQHGVATAVQALQYVKKRRNSFGKKRPVRTYQKRVEKGTDWSKKKADRDAGISTEQLKNLFKDLNNK
>NZ_CP015496.1|WP_014918447.1|610253_611162_+|primosomal-protein-DnaI
MEPIDKVIKKIVKERNLGDEQSLISQALHDPDVQAFLTANANKIDQKMVQNSMSNLYEYYSQKHTANKVMAGYAPQLFLNGKVIDIRYVPTKAKLAQDRKQAAERRLQLIDVPTRLHDVSLSEIDVNDDRKQVLTLIYDFLRKYKQDPHVQGLYLSGDYGVGKTYILAGLANYVVTNMNKNVVFLHVPTFIAGLASHFDDNSLQSEIRRLSECDLLILDDIGAESLSQWSRDDVLGVILQARMDNVLPTFFSSNLDMEALESHFEETRNATDPVKARRLMQRVRFLAKEVVVSGPDRRNSLH
>NZ_CP015496.1|WP_012212129.1|611452_613387_+|threonine--tRNA-ligase
MSFSITLPDGSKKDFEESLTIADLAQNIATSLGKAAVAGKVNGELKPLDYKLDSDSEVAIITNKDEEGLDVLRATAAFVFEAVAKCEYPELRLGEHVADEGGFYVDTDKDDQIKVGELPKLEKAMQKVIKNGEKIEHVQIAKSELEELYKNDKFKSELLAKVEGDTVDAYKLGDFVDFGFDALLPNTGKIKQFKLLSVAGAYWLGKSSNPMLQRIFGTAFFKEADLKADLKRRQEIKERDHRTIGRDLDLFFVDPKVGAGLPYWMPKGATIRRAVERYIIDREVADGYQHVYTPVLMNLDAYKTSGHWAHYRDDMFPPMDMGDGEMLELRPMNCPSHIQIFKHHIRSYRDLPLRVAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVALDQVQTEFAKILKLIMEVYKDFDITDYYFRLSYRDPKNTDKYFANDEMWEKSQKMLKGAMDDLGLDYVEAEGEAAFYGPKLDIQTKTALGNDETMSTIQLDFMLPDRFGLTYVGKDGEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNNEAHGEYAEKVRAELAKRGFRVEVDDRNEKMGYKIRESQTQKVPYTLVLGDEEMKSGKVNLRRYGTDEEISKSLDDFINEIDADVKSYSREN
>NZ_CP015496.1|WP_041810730.1|614199_614730_+|hypothetical-protein
MKKKLLLFLGAILLILGFAKLSSVNADAATIKATDWGAKKVFTTPKKTRGVWYYKEGKKVKKFKITAHTIDGVKLYKELNGKTSDRWVNKLIKADKKSGYKLADKVGESAWACHTIKYHKIIGFNADGWLAGSGDGFYYVPVKKNVKGKKVNALRVGEGAGNYLSYYAYKSRKLVK
>NZ_CP015496.1|WP_012212126.1|614920_615529_+|IS607-family-transposase
MKAGKVMDLLQISRSTLKRYREKGILEAKKLPTGQYDFDDDSVFLLKNKHSKRLTVLYGRVSTYKQKADLANQMQELSDFAQSKGFQANDSFQDIASGISFKNRKQFFKMLDLILAGKVKRVIITHKDRLSRVGFELFEYLFQNYGTEIDVISDEMNPKTDEQELFEEIISLLHCFSMREYSHRRAERKLFEATLNQKEKTK
>NZ_CP015496.1|WP_101853791.1|615558_616884_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MRKKIVPRNKAKYEHLASEYLVAGNSKLDQCSHASHDLYNRALYDLRQGFFKRNYVKGYCDLDQRFKKRYSARESMLYHSLFYVQSAQQTLKEVNTIWSAWLKALKAYQANPGKFTGRPRMPKYLAKGQRHVFFVTNQNAKVKDDYLIIPKLGFKLKLTPHLKAIQRVAFKPVYGGYKAIVQYKTNRDIDYLPDNGRCMGIDPGVDNAFACVANIQKAPLLVNGRAIKSVNQYYNKERSRLKALQARYHQLESIVDTQQGKKPVYRETKAMRRITAWRNRKIRQFAHKASKRIVDYALSCGANTIVIGNNKSWKRSSDMGRKNNQNFIGIPHKVMIDMIQYKANLAGISVIRTNESYTSQTSALDHEKPCWENGSHSRKRQGKTPINRRIHRGLFQSNNGRLVNADINGALQIIRKVFPKFSLDEGIEDAVLHPVKWSPLI

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Crispr_ID: NZ_CP015496_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015496_2

752689-752779

Orphan

I-B,III-A,III-B

Consensus_repeat	Method
GTATTCTCCACGTATGTGGAGGTGATCCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015496_2

>merge|NZ_CP015496|2|752689-752779|CRISPRCasFinder
GTATTCTCCACGTATGTGGAGGTGATCCTAAGATAACTCAGGTTACAATGAGAGTAATTAAGTATTCTCCACGTATGTGGAGGTGATCCTA

>NZ_CP015496|2|2|752689-752779|CRISPRCasFinder
GTATTCTCCACGTATGTGGAGGTGATCCTA	AGATAACTCAGGTTACAATGAGAGTAATTAA
GTATTCTCCACGTATGTGGAGGTGATCCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015496.1\|WP_035514433.1\|754641_754968_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP015496.1\|WP_101854068.1\|760166_762791_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP015496.1\|WP_012211430.1\|737647_738925_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|225995
NZ_CP015496.1\|WP_012212055.1\|755868_756531_-\|serine-dehydratase	unknown	unknown	gnl\|CDD\|129802
NZ_CP015496.1\|WP_012211358.1\|734849_736028_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP015496.1\|WP_012212061.1\|747525_748710_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367400
NZ_CP015496.1\|WP_012212062.1\|746041_747286_+\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
NZ_CP015496.1\|WP_023191368.1\|758443_758740_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015496.1\|WP_101854067.1\|750378_750999_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227323
NZ_CP015496.1\|WP_101854069.1\|763953_764337_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962
NZ_CP015496.1\|WP_101853805.1\|756679_757858_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP015496.1\|WP_023191369.1\|758874_760110_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340913
NZ_CP015496.1\|WP_101853803.1\|742420_743875_+\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|280533
NZ_CP015496.1\|WP_023191373.1\|764720_764999_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274102
NZ_CP015496.1\|WP_012212067.1\|734068_734575_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015496.1\|WP_012212063.1\|745344_745959_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015496.1\|WP_003627631.1\|765223_765847_-\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
NZ_CP015496.1\|WP_012212065.1\|739187_742400_+\|type-I-restriction-modification-system-endonuclease	unknown	unknown	gnl\|CDD\|236912
NZ_CP015496.1\|WP_101853802.1\|736111_737587_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|226987
NZ_CP015496.1\|WP_012212056.1\|754969_755854_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801

Protein	Function_ID	Function_description	E-value
NZ_CP015496.1\|WP_035514433.1\|754641_754968_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	1.69042e-34
NZ_CP015496.1\|WP_101854068.1\|760166_762791_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP015496.1\|WP_012211430.1\|737647_738925_-\|ISL3-family-transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.79993e-46
NZ_CP015496.1\|WP_012211358.1\|734849_736028_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	7.377e-112
NZ_CP015496.1\|WP_012212055.1\|755868_756531_-\|serine-dehydratase	gnl\|CDD\|129802	TIGR00719, Probable_L-serine_dehydratase_beta_chain, L-serine dehydratase, iron-sulfur-dependent, beta subunit. This enzyme is also called serine deaminase. This model describes the beta chain of an iron-sulfur-dependent L-serine dehydratase, as in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of beta chains from the homologous region of single chain forms such as found in E. coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	7.68833e-43
NZ_CP015496.1\|WP_012212061.1\|747525_748710_+\|hypothetical-protein	gnl\|CDD\|367400	pfam03217, SLAP, SLAP domain. This short domain is found in a variety of bacterial cell surface proteins. The domain is about 60 residues in length (although previously defined as 2 copies of this domain). It usually occurs in tandem pairs. It may be distantly related to the SH3 domain.	0.00213456
NZ_CP015496.1\|WP_012212062.1\|746041_747286_+\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	4.42838e-17
NZ_CP015496.1\|WP_101854067.1\|750378_750999_-\|hypothetical-protein	gnl\|CDD\|227323	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown].	3.09612e-30
NZ_CP015496.1\|WP_101854069.1\|763953_764337_-\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.09816e-19
NZ_CP015496.1\|WP_023191369.1\|758874_760110_+\|MFS-transporter	gnl\|CDD\|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.06221e-46
NZ_CP015496.1\|WP_101853803.1\|742420_743875_+\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	1.05598e-65
NZ_CP015496.1\|WP_023191373.1\|764720_764999_+\|hypothetical-protein	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	9.19411e-12
NZ_CP015496.1\|WP_101853805.1\|756679_757858_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	7.40269e-112
NZ_CP015496.1\|WP_003627631.1\|765223_765847_-\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	4.1514e-71
NZ_CP015496.1\|WP_012212065.1\|739187_742400_+\|type-I-restriction-modification-system-endonuclease	gnl\|CDD\|236912	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional.	0
NZ_CP015496.1\|WP_101853802.1\|736111_737587_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|226987	COG4640, COG4640, Predicted membrane protein [Function unknown].	0.00259461
NZ_CP015496.1\|WP_012212056.1\|754969_755854_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	5.68583e-106

>NZ_CP015496.1|WP_101854067.1|750378_750999_-|hypothetical-protein
MLKDVRKIPHTKHYSYFDQLGRRRMKNTSTKKAYYWINKKGQITGIKNNAKVICQRPQMPTGCEITAVTMMLNFADKKVSKYQAAKVMPRSSNPNKGFIGSPYKNFPLGFWVAPGGVKPVVQHYLGKSQIMTNCSINAIKQKLLRSHLVVVWVGMFDGISNHAITLTGYHGNTLYYNDPWTGTKRKISVAKFKIHWALDGHRAISY
>NZ_CP015496.1|WP_012212061.1|747525_748710_+|hypothetical-protein
MKLKRIALSIVAGAALMVPAALTGQSQNNSSIVQASTLKNKITFVKSYSQPMLYNKNGKSIANKNNINFNKPIRFYGQPTIIQGPKVNAFINLNGMPQSIIKGNTYADLGDGGYVDMKAVGSYNWNNNEIGLIKNAYVYNSKGQLLSTYRGRKAYLTKGSKIKYVGKSWVTYPDSYFNLGSGIYVKSNNVNTMNGKGVLKLNTNTAIYNKKSQRISFNGQRVLPKYSIVNYAGKRRAKTKSDDYYYTNLSGSKSYAVKNYKIKGQDYYYIGKGAYIKAINVGRINGNPVFRDGGATTIVPQMDLFIYNSKLKKTKQSVKKGQKIRALDPVILGSGDIAQLFYRIKGTSNYVSWGDYSEYGFEDDAYVGNFNFRVRLNPIKTIETAATRAAEESD
>NZ_CP015496.1|WP_012212062.1|746041_747286_+|DUF3883-domain-containing-protein
MRKLSDFDYMLDTYNSQDQILEDLRKEFVNSFPIDYIRNQMTISEYIEGKGNKDSFCNRLERELAGLGSIKGATASKFGIYYSQKNQKYVINKVWQTPEGYPDLLSSFKKLRKSIADLIEAGSRNDKVAIQAHPLATMVKMKILSVYYPEKYLNIFSERMLNYFGYQFYGDSFPLNASRFEKQQKLLKLKDSDEATKKWNNIKFGNYLYHLFPYAYELGKENLDNGYKNYSKIHFIQIKPQPPRKKEPKFPVAYDKQAIEFSQKKTVRKVQGLSKIDHIAKQKTAIDMGYLGEKEVVAYEQARLVKYPDLQRKIKWQSQVSDAIGYDILSFEKDGTPRQIEVKSTTAKISEKFDFILSENERLHALTLPNYWIYRVFDVKNKPVIYKIKNPLKNELAHLKPIKYQATIKVRDIR
>NZ_CP015496.1|WP_012212063.1|745344_745959_+|hypothetical-protein
MAFILLVIDNWYDLKLAPFIKNFVAVISSVVSMGMIIMSAIQIKLAIDDKRQKKQPKLKIFTFTADDAYTDSETGDFKIDREGKYNYTFCTNLGETKRSFQYYGICRKRDYPKIILPEKRGEYGDLFWINDKALKYIYPYLDHPEFQPSWKFETLDTGEVSKHYKINLTKAKERLKTLSKNQLEEFYVLYVDSTGYIFKELIRM
>NZ_CP015496.1|WP_101853803.1|742420_743875_+|type-I-restriction-modification-system-subunit-M
MTNQEIVQKLWNECNVLRDDGVSYQDYITELTYILFLKMSKEQDEEKDIPEKYRWDNLVNKEGLELKNFYRQLLLDLGNPEVVKSERINAIYANASTAIDEPANLEKIIKDINDLDWWSAREEGLGDLYEGLMEKNANEVKSGAGQYFTPRVLINMMVKMTKPKIGDRCNDPAAGTFGFMVAADQYLKDKTDDYSELSEEQYAFQVKEAFSGMELVPNTHRLAIMNEYLHGMDGRLEQGDSLSANGKWMKNFDVVLTNPPFGTKKGGERVTRDDLTYETSNKQLNFLQIIYNSLKRDGKARAAVVVPDNVLFADGVGEEIRKDLLNKCNLHTILRLPTGIFYAQGVQTNVLFFTRGEEDKDNTKETWIYDMRHQMRSFGKRNPLNDKDFAEFEKLFCVDDRSKRKETWDKEKNPNGRWRKFTIDEIKKRPNTSLDISWMSDEEEHETKSLKEILSDMNEKSKAISEAIAELNKALEGIDDSEDE
>NZ_CP015496.1|WP_012212065.1|739187_742400_+|type-I-restriction-modification-system-endonuclease
MSNFNTSDKNYHEYAKLASSAESLIFSDPRSSLTVFGTFGEQLTREIMHLDGLGDWELNQKARIDKMRYSGNGYPDAVLLALDEIRRKRNGATHDNQFIATKGAALKIDQKAYLVWKWFLESFSLNDVPEYVTPVDQRNILKSQADKIKALEEKIKQLQENRPQITISAEERTRRRKVNVQFAKKHPLNEEETRQLIDSQLRNAGWEADTPRLNNWKHQTEPQKGHSMAIAEWVLPNGQRADYALFKGLDFYGIVEAKRWDQDIAGQMAQPKEYAKEVPFRSDYHLIGQEMGDYKVPFIYAANGRPYLEQYKEKSGIWFWDARNPKENAYALEEFHTPEDLALKLTAKNKDEANKDLADDEDYPQFAARPYQLDAIQSLENAIKDGKKRILLAMATGTGKTRTAISLMYRLLKHKRARRILYLVDRNSLGRQTANAIKDNKIGTMSISSIYGLKELSDKVPDASTKIQIATVQGMIKRLFFNDDNSEKPSVGQYDFIIVDEAHRGYAEDRGLSDQEYENYDQEEYVSQYRRVVDYFDATAIGMTATPALQTTEIFGNPVYSYSYQQAVLDGYLVDHDAPVIIQTKLAKEGIHFKKGAEVDVFNQDEKTIDKEKLPDNMNFDIKDFNHRVITPSFNKVVCDELVRNYLDPTDRDGGKTLIFAATDEHADMVVDLLKKAFKDDGRPVDDDAIEKITGSIRHPNQEIRNFKNEDYPNIVVTVDLLTTGVDVPAITNIVFLRRVQSRILYEQMLGRATRLCPEIHKDKFRIFDAVGIYDAMNKVTNMKPVVQNPGHNVNYFLHHKEDYFEIAEDSHQYQVDMAGAVERKIKRLDDQGRNKFERLAEIPSVDEWAGKLSKMSKADFMKQWPKFEQLDQVHPAKKQFISNEQDEVIGTTRGYGQGNNKPEDYIDSFNKFVKENVNVIPALQIVATRPKDLTFDELKDIKLKLEQNGFKENDLQSAWKTTKHEQTTADIISFIRQAASGSKLVDHDVRIHNAMQKVYGMADWNIMQKKWLKRIENQLLSSTVLGPDAEHAFDDNFYFKRQGGYKQIKKIFPKYADQIIYVLNENLYV
>NZ_CP015496.1|WP_012211430.1|737647_738925_-|ISL3-family-transposase
MSSLNHCIKFELDVKDENIVFKDYFYKSIKLQKHKIYEAELIQPACPFCGSLDLLHNGHLITNIHYPTANASLPVIIRLAKQRVKCRDCERWSMAQSELVNKYCSISNASKLKVLSALTEDRSMTSIARENNVSINTVQRVLGNCSHRFIDSCEYLPAHLAFDEFKGVDRQLHFICLDGDSHQVVQILRTRYKKNLLKYFGRFSPQARANVRTVTMDLNFYYQDIVRACFPNAQIVIDRFHMIQMLTRSFNSLRVKVMKTFDKRSRQYQLLKSPWKLYLKKFDELEKVHPRYNWHYKDCLTQAQVVTEGINANTALENSYNLMQDFIQAIETGNTQKLKSLINCKDQIGTLMHKTLLTFKYNLTAVLNGAELPYSNGCLEGFNRKIKQIERTAFGYSSFTNLLTRIRLEENLYKEKEPNSLLMVA
>NZ_CP015496.1|WP_101853802.1|736111_737587_+|zinc-ribbon-domain-containing-protein
MNLRNHSSLHKLFYSLGKEVDPEEKYCPFCHFNLVNNDETMVTVNIGLLGLKNNESTKKDEEKIQSEKKESDAKPEKKKQPEKAVSKSNEDKKQKIEKNEIIPSPLPPKKKPTPLPKSKKKKFHFKWSILIEIVVAVIAILVMVGTNYYSCKAQIGRIETGLKNGEVNNVVTNGKVPLTAKNLTPLKEYYKNNPAAYKKLKKSLMGKNNLPIKLIKQGHYFLFFPRYVVQLPTYELNVVNDYHHSTVTVNGMKFVKKQKVFPGAYNIEAKSSYLGQTAKFKKTVNVWKDQTAEVNLNAKTIKVQGMPNGKLYLNNHNIGKLDKKGNLVLEDVPLTKPFSMYVAKKQKGKLVKTKQVRDVPAVIKGSKNVAVLKLDWQQSKNVGKLLEDNFNYPNSKDFVGGSKNKSYVELRTLVSNWRNSPNLTKYHANITVNNKSLNDIRYSVEFNFAFNKNGKRYKRVQVMKFRSASARSTSKGLKIKTIGGGRIVSSK
>NZ_CP015496.1|WP_012211358.1|734849_736028_-|IS256-family-transposase
MNDFTKNMAQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYDPYARTGWNTGNSRNGAYFRKVDTQFGEIEIQVPRDRNGMFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCVYLDATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENWTEMLQDMKSRGLEQVELFLSDGVVGMKTALEQTYPKAHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQPNKEAAIKVLHAFYDKWNRAYNHVIRNLKEIEPDLLVFYDYPKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNERYFNRIHKGFGQVQDTLESYFD
>NZ_CP015496.1|WP_012212067.1|734068_734575_-|hypothetical-protein
MKNYTIDHDIYLMNHKNGDVLKVTVNKEDSVKILQLYRQDGLGNYYLDKNSRLKKQDNLTTKEDIVKASKKIGGHNTHHIDKWHHQVVPIYNAQHQITGFKPKLALEHHTRIQNAKRYLRHLDHHHAIYLSTTSRNTLLKPINHLKDAIYADRNKEMVLAHKIHKLSR
>NZ_CP015496.1|WP_035514433.1|754641_754968_-|metal-sulfur-cluster-assembly-factor
MRDGETIKNDIINQLATVIDPELNVDVVNLGLIYEIDLDKDEICLINMTLTTPACPLTGYLIDSITQAVKKVPEVKNVDVEFVWYPVWTPNRMSDVAKKYFNIDEKQD
>NZ_CP015496.1|WP_012212056.1|754969_755854_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MYNHIKEIVADSEKQQKPISELIIEQECKLSGLPRQKVWNRMKHNLATMRAAVERGKSGAGIFSKTGLTGGEAVKIKKYRQTHHTLSGDTIIAAVQNAVATNEVNASMGVICATPTAGSSGTLPGVLFLLEKRMDLSEEQMIRSLFTAGGFGLVIANNAEIAGATGGCQAEVGSASAMGAAAAVEAAGGSAEQSAQAMSIAMSNLLGLVCDPIAGLVEVPCVKRNAIGAGNALISADIALAGCTSVIPADECIDAMKKVGHQMPASLRETGIGGLAGTPTGQAIKAKIFGKDAG
>NZ_CP015496.1|WP_012212055.1|755868_756531_-|serine-dehydratase
MTNRYKSVFDIIGPVMVGPSSSHTAGAVAIGRAGNKLFGGVPRKLTVHYYGSFAQTHRGHGTDYAIAAGILGFDTDDLRVPNAPEIAKKRGIDIRFVEEDGPSPIDHPNTAILDMSSGTKKAQISGCSIGGGSIEIRHLVIHDTEITPTGSLPIIIWLDYEKEILNEQNLTSLLQEKAPFSKKRIFHTKDCNIYEYDVENYLKPALVKELKEKFENIICL
>NZ_CP015496.1|WP_101853805.1|756679_757858_-|IS256-family-transposase
MNDFTQNMAQALFNQDKINDLLRKELQQAVNDLLEAELTAFLGYDPYARTGWNTGNSRNGAYFRKVDTQFGEIEIQVPRDRNGMFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCVYLDATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENWTEMLQDMKSRGLEQVELFLSDGVVGMKTALEQTYPKAHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQPNKEAAIKVLHAFYDKWNRAYNHVIRNLKEIEPDLLVFYDYPKQIRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNERYFNRIHKGFGQVQDTLESYFD
>NZ_CP015496.1|WP_023191368.1|758443_758740_+|hypothetical-protein
MTDKEILQKIEQKVKDSENWSVYHHLTDNLGSPAIMLREANTNADRLGVNIDVFKGYAYLFLDNGTPAEPGKPFSVQTLSSLNALTELLDIVKPYIKR
>NZ_CP015496.1|WP_023191369.1|758874_760110_+|MFS-transporter
MTHKKSFFSWWIFIVCCFISMIGFGLLVNTIGLFFGPISQEFNVGRANVALMTTFQNAAAAIALLFAGKIMEKVNLRWLLTACFALITVSMLSLTFANSLVHFYLAWTIIGICQPIAITLSIPVLLSKWFNQKLGTVMGISLGLSALGGTIFNPTIAEVIKQFGWRGGFVGEAMLIGLILVPLAISIKPEPTTQYPAYGKAMRSSKKVALTGLSLKQALKMPVFYAVAFAMLALQFVSGSVQHISGHITNIGISPITAATVVSGVMIGAAIGKISIGYFLDKFNAKLVLAVYSLFGVIGWGGQAMLRESNLLILAAVILGLGQGVCLVALPYLIRQIFGEKDYSNILSVINMIGAFAMSASVYLIGLFFDQTGSYNLGWMINVSAFALSFIVIMITLGKKESANSDLERVE
>NZ_CP015496.1|WP_101854068.1|760166_762791_-|cation-translocating-P-type-ATPase
MLKQYYLQTKAKVLEELKTSSDGLSSQQAKDNLAKYGKNALIEGKKKTTLQVFLEQFKDLMVIILIIAAVISAFTGELESTLVIIAVLILNAILGTVQHIKAEKSLESLKSLSSPSAKVLRDGKKIEIDSKDVVPGDIMLLEAGDMVTADGRILDNFSLQVNESSLTGESTNIDKADVEFDHEMPLGDRINMVYSSSLVTYGRANVVVTATGMNTEIGKIASLMNETKERRTPLQISLDKFSSKLATAILIICAIVLGLQIWRGQPIMDALLFAVALAVAAIPEALSSIVTIVQAMGTQKMAKENAIIKNLAAVESLGSVSVICSDKTGTLTQNKMTVQDIYIGGKTLKPNQLNLDNQLHRYLLYDAVLNNDSSLVDGKGIGDPTEYALLEMYRQVPGIDLGDKGLGISEEDLRGLLTRKQEVPFDSDRKLMSTKHLIHTVPTIFVKGAIDVLLDRCVNIRLDDEVRPITEEDKKQILAQNQHFSENGLRVLTFAYKESDEDLTPETENGFTFIGLVSEMDPPREESIEAVARAKKAGIRTVMITGDHKVTAVAIAKKIGIFNDGDMAVTGLELDKMSDEELEQKIEKIAVYARVSPENKIRIVNAWQKKDHIVSMTGDGVNDAPALKKADIGVAMGITGTEVSKDAASMILADDNFATIIKAVANGRTVFENIKNAIMYLLSGNLSAIITVLFASIGGFSVPFVAVQLLFINLVTDSLPALAIGVEPGAPDILDRKPRDPKVGILNKSLVTEVGLQGLIIAVGVITAFMIGRQTSPAVACTMAFSTLTFARLLHGFNCRSQHSIFKIGFKKNWYSLAAFAVGTLLLALILFVPALHGLFAVTPLTGNQLLWIIGLAVIPTVIIQIVKVVNENR
>NZ_CP015496.1|WP_101854069.1|763953_764337_-|ABC-transporter-permease
MLLFGGFAGIGGVVQGLGTYQNYFTQTSSINIGWDGLSVALLGNSTAIGILIAYLLFSILKIGGLGMQTVAGVPYEIVSIVIAAIIFFIAIKYVFDLLFAVKKGTEIGPNNGVDGPNIKLQKEGPVL
>NZ_CP015496.1|WP_023191373.1|764720_764999_+|hypothetical-protein
MSLTLGIDDKLKAETRANLKKMGIDMTTATKMYYIYINQHGKLPFAPSTGRSELDQAVYEAKHYQYAGEYNSLEEFRKDLYSPDDTHNYIRN
>NZ_CP015496.1|WP_003627631.1|765223_765847_-|orotate-phosphoribosyltransferase
MHQDQIISQLIQEKIISISPDKPFTYASGMLSPIYTDLRLMVSYPDLRDMIASDLANLIAKEFPEATIIGGVATAGIPHAALVAEKLHLPMIYVRPKPKDHGKGRQIEGRFSSSDKIVLIDDLITTGGSVLNAVKATEKDGGNVIGVSSIFTYYLPDAKENFAKANVKYAPLLSYPELLKKENESGHITREQYQTLKTWHEDPWAWK

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Crispr_ID: NZ_CP015496_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015496_3

1706457-1706636

TypeV

Consensus_repeat	Method
ATGTGGGATTTGAACCCACGC	PILER-CR

2 spacers

cas14j,cas14k

The CRISPR arrays of NZ_CP015496_3

>merge|NZ_CP015496|3|1706457-1706636|PILER-CR
ATGTGGGATTCGAACCCACGCATGCTGGATCCACAAACCAGTGTGTTAACCCCTTCACCAATTCCGCCATAAACGGTCCATGTGGGATTTGAACCCACGATCTCCTCCGTGACAGGGAGGCGAGATAAACCACTGCTCCAATGGACCAATCAGAGGAGGATGTGGGATTTGAACCCACGC

>NZ_CP015496|3|2|1706457-1706636|PILER-CR
ATGTGGGATTCGAACCCACGC	ATGCTGGATCCACAAACCAGTGTGTTAACCCCTTCACCAATTCCGCCATAAACGGTCC
ATGTGGGATTTGAACCCACGA	TCTCCTCCGTGACAGGGAGGCGAGATAAACCACTGCTCCAATGGACCAATCAGAGGAGG
ATGTGGGATTTGAACCCACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015496.1\|WP_072749045.1\|1692953_1693772_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270407
NZ_CP015496.1\|WP_020829065.1\|1701368_1701899_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
NZ_CP015496.1\|WP_079227892.1\|1694495_1695167_-\|XRE-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP015496.1\|WP_012211534.1\|1693814_1694483_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NZ_CP015496.1\|WP_003633074.1\|1716795_1717143_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP015496.1\|WP_020829066.1\|1709104_1709605_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP015496.1\|WP_003633076.1\|1716498_1716750_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP015496.1\|WP_035509267.1\|1712493_1712922_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015496.1\|WP_003633113.1\|1697170_1698253_-\|M42-family-peptidase	unknown	unknown	gnl\|CDD\|349906
NZ_CP015496.1\|WP_003633105.1\|1701911_1703240_+\|uracil-transporter	unknown	unknown	gnl\|CDD\|236744
NZ_CP015496.1\|WP_003627960.1\|1708393_1709002_-\|IS607-family-transposase	unknown	unknown	gnl\|CDD\|239738
NZ_CP015496.1\|WP_003633083.1\|1713130_1713331_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP015496.1\|WP_012211532.1\|1695443_1697066_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|237894
NZ_CP015496.1\|WP_012211524.1\|1714685_1715642_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP015496.1\|WP_003633078.1\|1715759_1716317_-\|YdhK-family-protein	unknown	unknown	gnl\|CDD\|369427
NZ_CP015496.1\|WP_041806185.1\|1707038_1708364_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14k	-	gnl\|CDD\|223747
NZ_CP015496.1\|WP_041806184.1\|1704162_1705353_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP015496.1\|WP_101853965.1\|1709815_1711222_-\|ISLre2-like-element-ISLhe10-family-transposase	unknown	unknown	gnl\|CDD\|284250
NZ_CP015496.1\|WP_003633108.1\|1699608_1701078_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_CP015496.1\|WP_020829063.1\|1698379_1699585_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340949

Protein	Function_ID	Function_description	E-value
NZ_CP015496.1\|WP_072749045.1\|1692953_1693772_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270407	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold. This group includes periplasmic glutamine-binding domain GlnP from Bacillus subtilis and its related proteins. The GlnP domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.05526e-77
NZ_CP015496.1\|WP_020829065.1\|1701368_1701899_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	2.39737e-98
NZ_CP015496.1\|WP_012211534.1\|1693814_1694483_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	1.45219e-56
NZ_CP015496.1\|WP_003633074.1\|1716795_1717143_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	1.2106e-16
NZ_CP015496.1\|WP_020829066.1\|1709104_1709605_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.46798e-13
NZ_CP015496.1\|WP_003633076.1\|1716498_1716750_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	8.8979e-16
NZ_CP015496.1\|WP_003633113.1\|1697170_1698253_-\|M42-family-peptidase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	2.57949e-100
NZ_CP015496.1\|WP_003633105.1\|1701911_1703240_+\|uracil-transporter	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	2.42621e-145
NZ_CP015496.1\|WP_003627960.1\|1708393_1709002_-\|IS607-family-transposase	gnl\|CDD\|239738	cd03769, SR_IS607_transposase_like, Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.	5.78857e-48
NZ_CP015496.1\|WP_003633083.1\|1713130_1713331_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.28077e-33
NZ_CP015496.1\|WP_012211532.1\|1695443_1697066_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP015496.1\|WP_012211524.1\|1714685_1715642_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.18527e-69
NZ_CP015496.1\|WP_003633078.1\|1715759_1716317_-\|YdhK-family-protein	gnl\|CDD\|369427	pfam07563, DUF1541, Protein of unknown function (DUF1541). This family consists of several hypothetical bacterial and occurs as a tandem repeat.	4.07677e-19
NZ_CP015496.1\|WP_041806185.1\|1707038_1708364_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.839e-18
NZ_CP015496.1\|WP_041806184.1\|1704162_1705353_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.41748e-47
NZ_CP015496.1\|WP_101853965.1\|1709815_1711222_-\|ISLre2-like-element-ISLhe10-family-transposase	gnl\|CDD\|284250	pfam06782, UPF0236, Uncharacterized protein family (UPF0236).	2.88685e-26
NZ_CP015496.1\|WP_003633108.1\|1699608_1701078_-\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.59133e-46
NZ_CP015496.1\|WP_020829063.1\|1698379_1699585_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.00067e-154

>NZ_CP015496.1|WP_041806184.1|1704162_1705353_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MLKGIKLRLYPNRTQQNQLEQMFGNDRFVWNQMLAMMNERYQNNKDLPFLGKFKLNYLLKPLKKEYPFLKNSDSSSLQVVNEFLTQSWKNFFQDKTGQIGKPRFHSRKYLKKSYTGKSIIKTAGKRYLKIPKLGYVKTSKTGVLQNTKVKRYTVVLEPTGKYYLSLQVEISEPEKYSLTGKRVGIDVGAADLAILSNGLKYPSFNSSYFEKKAKVWQRKYARRRHLAKLLVLQDRNKKVPCPRSLESFTNWQKAQKSKAKCQAKAANQRRDYLHKLTTHLVKQYDVIAIEDLKTKNLQKNHHLAKSIANASWRMFRQMLEYKCEWYGKKLIAVDPKNTSRICSKCGYNSGAKPLEIREWTCSKCQTKHDRDINAAVNILHKGSTKLNGQGLAMVTS
>NZ_CP015496.1|WP_003633105.1|1701911_1703240_+|uracil-transporter
MSKKENFRNPDAILDVYEKPEFGQGVLLSLQHTFAMFGSTVLVPILIGINPSIALLSSGIGTLVHMILTHFKIPAYLGSSFAFVATMQALMKADGYPAVAQGAIASGLVYVIVALIIAKVGSGWVNKVLPPIVVGPIIIVIGLSLATTAANDAMMNNQKYDLTYFGVAIFTLVMTLVFQMCFKGFTSLVSIMLGIICGYVLACFLGIVDFSGVEKAAWFSIPSLDVMGISYHFKWYPAAILAMAPIAFVTMTEHMGHIMVLNSLTKRNFFKNPGLHRTMMGDGISTIIAGFIGGPPTTSYGENIGVLAMTKVHSVWVLAGAAVCAIIFSFVGKLAALIESIPMPVIGGISFLLFGTIASNGLKILVDDKVDFGEKRNMLIASVILVIGIGGAYLQLGNFQLTSVALSTIIGMILNWVLPKKAASEKALEEKNKQKQDGKIYQ
>NZ_CP015496.1|WP_020829065.1|1701368_1701899_+|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MAKEIIDAIGMKRALMRMTYEIVERNKGTENLVLVGIKTRGLYLAQRIAANLKKLEDVEISVGAIDVLQYRDDLPESKKEKMIHNQQLDFDITDKNVVLVDDVLFTGRTIRAALDALMDQGRPAKINLAVLVDRGHRELPIRPDFIGKNIPTAMNEEVKVSMTEVDDKDSIELINK
>NZ_CP015496.1|WP_003633108.1|1699608_1701078_-|MFS-transporter
MNKKQLFMVTLALLLANIMSGLDATIINTAIPAIVSDLHGIQYMGWIVACFLLGMSVSVPIWGKLGERMGNKFAFELSLALFILGSLLEGIALDIYFFLIARILMGVGAGGMGSLPYVIVGYIYPNIKRRTVILGYIAASFSAASIAGPLVGGWIVDTLSWHWVFYINVPLGLIAIILSFVYYKGIRKPNKNTQFDKLGAFTLIAGLTSFLIGIQLLGMVSLPVVLGFIILSILLLVVFIRAERKAKSPVVPLSVFTNKALVGDFLIFALAWGSSIAVNTYLPMWAQTILGASALVGGMTLIPNSIVDIVGSQTAPYFLRHVNNYRLLIANLTIMAITAVGLIFAPISTPYQILALIAAFSGFGVGSIFVILQIKVQVDASEKDMAPATSLSFLIRILALTIMAAIYGVIMNLALGRGIAGHPGITMTMMNKLSDAESAKSLPVQLLPTMRKIFYGGIREIMIVSLVLLVAAYVVNYLYNRHEAKIMAE
>NZ_CP015496.1|WP_020829063.1|1698379_1699585_+|multidrug-efflux-MFS-transporter
MKEKPIWKKNLFVLSIAVFIAGIAFSEVMPFLPLYIDTLGKFSHQQLNFWSGFIYSGTYLVSALISPWWGKLADKKGRKPMTLRASLGMAIVIGCMGLVTNVYQLFILRMLQGVFAGFVSNSNALIATETPKEKSGQALGTMASSFTAGNLLGPFIGGALASIFSYRVTFFITGGLLLISFFLSLFFVHETDFKPVTEKKLDKASGIIKELRSPQLIFGLLLTTLIIQAANNSINPIVSLYVKQLMANHGNVVFISGVIAALPGIATFLAASRFGALGDRIGTHKIIVGGFIGATILFFLTAFVQNTVELGILRFLVGFTDACLFPQVQTLLTKNTPAKITGRIFSWNQSAMYVGNIFGPLLGSTISGLTSYSIVFIVTTIIVVFNLILFKFNVINNLRQK
>NZ_CP015496.1|WP_003633113.1|1697170_1698253_-|M42-family-peptidase
MQKEQEIQMLKEFSDANSTSGFEEEFVKLFTSYAEKTANIEVDGMLNVYASKKENKGDRPVIQLDAHSDAVGFITQAVRPNGLIKFVPLGGWVKYNIPALKVKVRNRDGEYIPGVVATKPPHFMTAAERNNVPDVVDMSIDVGSSSREETIKDYKIDTGCPIFVDVKCEYHEKSGLFFGKDFDDRFGAGAMIDVLDNLKGEETNFDVVAALSSQEEVGLRGAYVTARKVKPDLCLVLESCPADDTFTPDWLSQTGLKRGPMLRDMDTTFLPNPKFQQYACDLADKNNIPYTRSVRTGGGQDGAAIYYENGAPTIVIGIPVRYEHSPYCFSSYKDFKASVDLATAIIRDITQEKLDSFKKF
>NZ_CP015496.1|WP_012211532.1|1695443_1697066_-|ATP-binding-cassette-domain-containing-protein
MITVSDLSLKFGGRTLYEDVNLKFTPGNCYGVIGANGAGKSTFLKLLEGKLEPTTGSISIDPNERMSSLNQDHFAFEDFTVMDTVIQGHKELYQVMKEKDALYAKPDFGDEDGVKAAELESKFAELDGWNAEANASKLLQSLDIPESEHQMLMKELPESEKVKVLLAQALFGNPDILLLDEPTNGLDVHTVEWLENFLADYPNIVIVVSHDRHFLNQVCTEMCDVDRGKIQLYVGNYDFWYESSKLANELVANKNDKKEEKIKQLQEFIARFSANASKSRQATSRKKQLDKITLDDIKPSSRKYPFVKFEMHRDLGNDLVKVENVSYSVDGEKILDNVSFIVRPGDKVAFLSRNALAATALLDIIAGKIKPDTGTVTWGQTTAFNYMSRDLNANFNNDDLTILDWLRQYATKEQDDNTFLRGFLGRMLFSGEEIEKKIKVLSGGEKVRCQLSRMMLEPANVLIMDDPTNHLDLESITALNDALVAYPGSILFTSHDHEFIQTIANHIIEVGPKGIVSRQDTTYDEFLDKESIQDQVEKIY
>NZ_CP015496.1|WP_079227892.1|1694495_1695167_-|XRE-family-transcriptional-regulator
MDNLPFSSVTGKLDNIPFNYDHAGTKEVVVNNVIGDYFNPVTKKYEVSDHTFVVGHIKDSNLDQDIAIEQMQQAAMNIINELNKRQMPPHMVMPHLLTDVEKAKQVVTDDDVKISQLSKETGISEEILSDYRENPATLKKASNSTIERLITKYYEKYFNRNEIEKFRFMLIKTVMAYLKENKKDEIDYDPVYELYKLCQQADWHRLARMEEIWRAFYTVDNQH
>NZ_CP015496.1|WP_012211534.1|1693814_1694483_-|type-1-glutamine-amidotransferase
MRVNVLQHAPNEGPGSIQDWCHEHNHEMFVYHPTDFGILPTIDETDLLVILGSPNSPNDKLDWIKNERVLIKQMLKANKPILGICFGSQQIAKTLGYEVLDAPAKEVGWAPVYLQDHTIENIPKKLTALHWHQQMSEIPEDAKLLFSSDLVKNQGYLLGNNVIGLQFHFEPKEDNVREIAINDGAYALENNDLHQTPQEIIAHGVPKENKDVMFVLLDYITK
>NZ_CP015496.1|WP_072749045.1|1692953_1693772_+|transporter-substrate-binding-domain-containing-protein
MKKRFFLPTLLIGIALFTLSACSQNKKQIVYQTVKSTKTINWGVKADTPLFGSMNIKTGKINGFEIDLAKALTKEMLGNNAKANFVTTTANTKIQLLKNRNVDAVIAAMTITPEREKQVDFSKPYFPAGQSIMVAKNSKIKNVKDLNNKKVLVVKGTTAADAVKKFAPKAEILQFDDYGQAFAALKAGQGDAFVTDNGILVGILRDSSGYKLVGGNFTNQPYGIAVNKGQTEMDKQINLALTKLEKDGTYNRLLKKWFGNIPGFNVKTAEKY
>NZ_CP015496.1|WP_041806185.1|1707038_1708364_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MRKKVVPRNKAKYEHLASEYLVAGNSKLDQCSHASHDLYNRDLYDLRQGFFKRNYVKGYCDLDQRFKKRYSARESMLYHSLFYVQSAQQTLKEVNTIWSAWLKALKAYQANPGKFTGRPRMPKYLAKGQRHVFFVTNQNAKVKDDYLIIPKLGFKLKLTPHLKAIQRVAFKPVYGGYKAIVQYKTNRDIDYLPDNGRYMGIDPGVDNAFACVANIQKAPLLVNGRAIKSVNQYYNKERSRLKALQARYHQLESIVDTQQGKKPVYRETKAMRRITAWRNRKIRQFAHKASKRIVDYALSCGANTIVIGNNKSWKRSSDMGRKNNQNFIGIPHKVMIDMIQYKANLAGISVIRTNESYTSQTSALDHEKPCWENGSQSRKRQGKTPINRRIHRGLFQSNNGRLVNADITGALQIIRKVFPKFSLDEGIEDAVLHPVKWSPLI
>NZ_CP015496.1|WP_003627960.1|1708393_1709002_-|IS607-family-transposase
MKAGKVMDLLQISRSTLKRYREKGILEAKKLPTGQYDFDDDSVFLLKNKHSKRLTVLYGRVSTYKQKADLANQMQELSDFAQSKGFQANDSFQDIASGISFKNRKQFFKMLDLILAGKVKRVIITRKDRLSRVGFELFEYLFQNYGTEIDVISDEMNPKTDEQELFEEIISLLHCFSMREYSHRRAERKLFEATLNQKEKTK
>NZ_CP015496.1|WP_020829066.1|1709104_1709605_-|GNAT-family-N-acetyltransferase
MIIKPLISEDEAKETSRLFQKCWQNTYKDILPDVFLDNIPENAWVKRLNESGRHNLIFIDDDNKIRAAVSYGRPRDTRMLGCGELMALYVEPDFQGFNIGKTLLNAAENELKKMGYGKIYLWCIDGDENARQFFEHFGWVNNATEKFVEIAGKEYKYLLYSHKLLV
>NZ_CP015496.1|WP_101853965.1|1709815_1711222_-|ISLre2-like-element-ISLhe10-family-transposase
MESIIADIVKIIKSENNVIAREKALMCYFFDLIRELMTAALEEVDAGLVEETKKQGYQIEKKNKRSVVTAFGEISYWRRRYVCPGKKAQYPLDKLMGYDKYKRYSVLAVKDVLQVSAVATYRNTALAVNTLSCFKISHSQVGKLIVQAGKQIKAQQQSEERYDGITQKKKAPVLYLEGDGVVIKGTKKRLEFHRYQVCEDIINLSKTRRKRVQAKEFVSLSRLDALQEIKAYLANAYDLSDTLIISNADGGAGYAKKDFNEIVGYCRQHEHFLDVFHLNKKIKDRLGFMPAMQSKLISAVEFKYDRHLTDVILDTIESNLVDELNTPENHENLRRLRSYLHRRWVDIKPFKMRHLSVIKAIGCCESNHRKYTYRVKGQGKYWSEDGAEGILRVLTCIKNNELEYWLSSEFAGGQLDIGDQEELKGAVRASLRKTHGVHLGIHHGAIESLTAGHSYLDDFSRKINQINI
>NZ_CP015496.1|WP_035509267.1|1712493_1712922_-|hypothetical-protein
MINNWVSSSKELQLLVDDYLLMVNYRSVIENDLVNYTQGIESYFRNERLTLRDKINKFIEELPKSYRELLSEHVGNTDYWIGKLVSTRVFLTHGDRENMAVSNPYKLVQMTKIFGFMVRIFILQKLGITIDKPKILNKDQNV
>NZ_CP015496.1|WP_003633083.1|1713130_1713331_+|cold-shock-protein
MQTGTVKWFNADKGFGFITGSDNKDVFVHFSAIKTDGFKSLEEGQKVSYDVEQGGRGPQATNVVPQ
>NZ_CP015496.1|WP_012211524.1|1714685_1715642_+|IS30-family-transposase
MKWAVSNSKWESLIPRAVVVPKPLCHEKLNATAVGGAYSAVKAQQNYQQRRLKSRRLRVLENLKLRDFVLHCILQRQWSPEQIAGRLSLENSNWHISYNTIYRGIERNNLGVKRKRHGARGFARKLRHRGKTRKVKGTVNERRGRFNNVPSVHERPVSCENRTRFGHWEGDTVRGKIGRSGLVSLVDRKSRYLLSERVPKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVGKELGISVYFPDLHAPQQRGTNENTNGLIREYFSKGNDLDELTDQDIAKFVKDLNNRPHKVLVWKTPSEVFFGKKLHLI
>NZ_CP015496.1|WP_003633078.1|1715759_1716317_-|YdhK-family-protein
MKKLVWYVCAVVAMLFLVAGCSSNSTQKEGSSTHSHSSEKTEMHEHTGSKKVHGLKKAEQPKYKAGTKVKLTADHMKGMKDANATIVNAYDSKLYAVDYKSTSDKKMVKDHKWVTINEIEGNRKEYKKGDKVTLKADHMAGMKNSSATIVEIQKGPAYMVNYQPTNGGKQVTNHKWVAEDEIEKR
>NZ_CP015496.1|WP_003633076.1|1716498_1716750_-|PspC-domain-containing-protein
MTKKKLTKSSDKIVSGVFGGIAEYFGWDKAIVRIIGAFLIIFPGNIIGGAILYAVTALVMTDPTQGDHCDDGDSVIKGEFREK
>NZ_CP015496.1|WP_003633074.1|1716795_1717143_-|helix-turn-helix-transcriptional-regulator
MKIQVTADLLDGLVLALLNREDYYGYALTQEMQKAISISESTMYPVLRRLKKEGYLTTYDQPFQGRNRRYYQITSDGEQHLEQVYKMWTDYKESLDQVFIPDKEHDLTHKNDIEA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015496_1	1.21\|603187\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	603187-603220	34	AP013456	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S23-C23	4052-4085	5	0.853
NZ_CP015496_1	1.23\|603321\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	603321-603354	34	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	117489-117522	8	0.765
NZ_CP015496_1	1.5\|602120\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602120-602153	34	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	361010-361043	9	0.735
NZ_CP015496_1	1.13\|602655\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602655-602688	34	AP013772	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C39-MedDCM-OCT-S34-C80, * SEQUENCING IN PROGRESS *	9086-9119	9	0.735
NZ_CP015496_1	1.13\|602655\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602655-602688	34	AP013773	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C39-MedDCM-OCT-S42-C70, * SEQUENCING IN PROGRESS *	33585-33618	9	0.735
NZ_CP015496_1	1.13\|602655\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602655-602688	34	AP013495	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C39-MedDCM-OCT-S27-C61	11025-11058	9	0.735
NZ_CP015496_1	1.13\|602655\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602655-602688	34	AP014445	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C39-MedDCM-OCT-S35-C62, * SEQUENCING IN PROGRESS *, 4 ordered pieces	864-897	9	0.735
NZ_CP015496_1	1.21\|603187\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	603187-603220	34	NZ_CP012425	Spiroplasma kunkelii CR2-3x plasmid pSKU76, complete sequence	498-531	9	0.735
NZ_CP015496_1	1.5\|602120\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602120-602153	34	NZ_KU254577	Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence	52522-52555	10	0.706
NZ_CP015496_1	1.5\|602120\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602120-602153	34	MN310371	Pseudomonas monteilii strain QJ20133 plasmid pJ20133-VIM, complete sequence	50537-50570	10	0.706
NZ_CP015496_1	1.5\|602120\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602120-602153	34	CP031732	Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence	73237-73270	10	0.706
NZ_CP015496_1	1.5\|602120\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	602120-602153	34	NC_022739	Pseudomonas sp. VLB120 plasmid pSTY, complete sequence	155256-155289	10	0.706
NZ_CP015496_1	1.25\|603453\|34\|NZ_CP015496\|PILER-CR,CRISPRCasFinder,CRT	603453-603486	34	NC_010181	Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence	18000-18033	11	0.676

1. spacer 1.21|603187|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to AP013456 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S23-C23) position: , mismatch: 5, identity: 0.853

ccattaaata-atcattacttgtattaaataaagt	CRISPR spacer
-aactaaatacatcattacctgtattaagtaaagt	Protospacer
  *.****** ********.********.******

2. spacer 1.23|603321|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 8, identity: 0.765

atcaaagctatcctgctattgctgatggctggtg	CRISPR spacer
atcaaagctatcctgcaattgctgttttactgta	Protospacer
**************** ******* *   . **.

3. spacer 1.5|602120|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

atatgaattccttggctagggctttgagcactga	CRISPR spacer
aattgaattccttggccagggctttaagggatcg	Protospacer
*  *************.********.** . * .

4. spacer 1.13|602655|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to AP013772 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C39-MedDCM-OCT-S34-C80, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

ttttgacttttgcttgttacgactaatcaggaaa	CRISPR spacer
tttggacttttgctagttacgactcagaacaagc	Protospacer
*** ********** ********* *  * .*.

5. spacer 1.13|602655|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to AP013773 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C39-MedDCM-OCT-S42-C70, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

ttttgacttttgcttgttacgactaatcaggaaa	CRISPR spacer
tttggacttttgctagttacgactcagaacaagc	Protospacer
*** ********** ********* *  * .*.

6. spacer 1.13|602655|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to AP013495 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C39-MedDCM-OCT-S27-C61) position: , mismatch: 9, identity: 0.735

ttttgacttttgcttgttacgactaatcaggaaa	CRISPR spacer
tttggacttttgctagttacgactcagaacaagc	Protospacer
*** ********** ********* *  * .*.

7. spacer 1.13|602655|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to AP014445 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C39-MedDCM-OCT-S35-C62, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 9, identity: 0.735

ttttgacttttgcttgttacgactaatcaggaaa	CRISPR spacer
tttggacttttgctagttacgactcagaacaagc	Protospacer
*** ********** ********* *  * .*.

8. spacer 1.21|603187|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012425 (Spiroplasma kunkelii CR2-3x plasmid pSKU76, complete sequence) position: , mismatch: 9, identity: 0.735

ccattaaataatcattacttgtattaaataaagt	CRISPR spacer
catataaataatcattattagtattaaactcaat	Protospacer
*   *************.* ********.  *.*

9. spacer 1.5|602120|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU254577 (Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence) position: , mismatch: 10, identity: 0.706

atatgaattccttggctagggctttgagcactga	CRISPR spacer
agttgaattccttggccagggccttgagggaacg	Protospacer
*  *************.*****.***** .   .

10. spacer 1.5|602120|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to MN310371 (Pseudomonas monteilii strain QJ20133 plasmid pJ20133-VIM, complete sequence) position: , mismatch: 10, identity: 0.706

atatgaattccttggctagggctttgagcactga	CRISPR spacer
agttgaattccttggccagggccttgagggaacg	Protospacer
*  *************.*****.***** .   .

11. spacer 1.5|602120|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

atatgaattccttggctagggctttgagcactga	CRISPR spacer
agttgaattccttggccagggccttgagggaacg	Protospacer
*  *************.*****.***** .   .

12. spacer 1.5|602120|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to NC_022739 (Pseudomonas sp. VLB120 plasmid pSTY, complete sequence) position: , mismatch: 10, identity: 0.706

atatgaattccttggctagggctttgagcactga	CRISPR spacer
aattgaattccttggccagggccttgagggaacg	Protospacer
*  *************.*****.***** .   .

13. spacer 1.25|603453|34|NZ_CP015496|PILER-CR,CRISPRCasFinder,CRT matches to NC_010181 (Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence) position: , mismatch: 11, identity: 0.676

actaatgaagtaatcagtaaggtgttgggttaca	CRISPR spacer
gtataataagtaatcagtaaagtgttgagttgtt	Protospacer
..  *  *************.******.***..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10451 : 129000

Streptococcus_phage(21.43%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211199.1\|10451_11705_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.0e-08	21.1
WP_003624897.1\|12374_13967_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	4.9e-15	32.2
WP_041810667.1\|15604_15799_-	hypothetical protein	NA	NA	NA	NA
WP_012211200.1\|16234_16843_+	hypothetical protein	NA	NA	NA	NA
WP_012211201.1\|16950_18972_+	DHH family phosphoesterase	NA	NA	NA	NA
WP_012211202.1\|18983_19439_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_012211203.1\|19469_20864_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.2e-119	50.1
WP_012211358.1\|21071_22250_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012211204.1\|22480_23410_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012211205.1\|23526_24804_-\|transposase	ISL3-like element ISLhe2 family transposase	A0A2D1GQC1	Lysinibacillus_phage	1.4e-12	21.7
WP_101853673.1\|24894_26172_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_003624871.1\|26440_27370_+	DegV family protein	NA	NA	NA	NA
WP_035514160.1\|27499_28351_+	ROK family protein	NA	NA	NA	NA
WP_003631748.1\|28502_28673_+	CsbD family protein	NA	NA	NA	NA
WP_023191122.1\|28723_28984_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_012211208.1\|29044_30274_-	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_101853674.1\|30357_31062_-	methyltransferase	G3MA03	Bacillus_virus	1.6e-18	44.4
WP_101812558.1\|31614_32901_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.7e-106	51.3
WP_014562792.1\|33158_33512_-	DUF3278 domain-containing protein	NA	NA	NA	NA
WP_072749171.1\|33508_33709_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_065866708.1\|33876_34515_+	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	7.6e-20	31.8
WP_014562795.1\|34511_35270_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_065866706.1\|37982_38570_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_012211214.1\|38673_39975_+	restriction endonuclease	NA	NA	NA	NA
WP_035509017.1\|41635_43036_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_101853675.1\|43132_43906_+	putative ABC transporter permease	NA	NA	NA	NA
WP_003624806.1\|43944_44505_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_003624803.1\|44505_45030_-	ECF transporter S component	NA	NA	NA	NA
WP_003628011.1\|45031_45442_-	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_012211218.1\|45462_47697_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	A0A222ZQ84	Mycobacterium_phage	2.5e-89	33.2
WP_012211219.1\|47950_48985_+	AI-2E family transporter	NA	NA	NA	NA
WP_012211220.1\|48981_49554_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_101853676.1\|49733_50762_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-46	34.7
WP_023190354.1\|50897_51527_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_012211222.1\|51929_53051_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.0e-92	46.8
WP_012211223.1\|53028_54195_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	2.6e-98	46.9
WP_012211224.1\|54362_54677_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_003624787.1\|57244_58006_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	6.5e-18	28.6
WP_012211225.1\|58002_58899_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_101853677.1\|58895_59888_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012211227.1\|60236_60944_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_012211230.1\|62019_62877_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	3.9e-59	43.1
WP_012211231.1\|63215_65141_+	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	A0A1S5SF82	Streptococcus_phage	4.7e-65	29.8
WP_023190364.1\|66153_67167_-	D-2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	1.0e-50	35.6
WP_012211233.1\|67293_68136_+	phosphotransferase	NA	NA	NA	NA
WP_003624751.1\|68590_69418_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	3.4e-97	63.5
WP_012211234.1\|70434_73266_+	DEAD/DEAH box helicase	A0A0K2CZF8	Paenibacillus_phage	4.7e-29	24.9
WP_101853678.1\|73305_74433_-	serine hydrolase	NA	NA	NA	NA
WP_003624744.1\|74605_75019_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.0e-09	38.9
WP_014918044.1\|76999_77185_+	hypothetical protein	NA	NA	NA	NA
WP_003628364.1\|81792_82422_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_054607133.1\|82576_82795_-	steroid-binding protein	NA	NA	NA	NA
WP_012211238.1\|82884_83754_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_101511789.1\|83750_84584_-	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_020828881.1\|84717_85674_-	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_003625326.1\|85691_86528_-	glycosyl transferase	NA	NA	NA	NA
WP_072749203.1\|86623_87442_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023191278.1\|88300_89059_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_101853679.1\|89187_90309_+	s-layer protein	NA	NA	NA	NA
WP_012211358.1\|90842_92021_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853680.1\|92589_93492_+	hypothetical protein	NA	NA	NA	NA
WP_052540648.1\|94187_95303_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023190998.1\|95467_95662_-	hypothetical protein	NA	NA	NA	NA
WP_101853681.1\|96147_97326_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023190500.1\|97445_97652_-	hypothetical protein	NA	NA	NA	NA
WP_101853682.1\|99586_100303_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.7e-41	38.8
WP_072749133.1\|100369_102226_+	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	5.1e-32	32.0
WP_101853683.1\|102206_103565_+	hypothetical protein	NA	NA	NA	NA
WP_012211249.1\|103567_104392_+	hypothetical protein	NA	NA	NA	NA
WP_012211250.1\|104407_105205_+	MBL fold metallo-hydrolase	A0A2I7SDH3	Paenibacillus_phage	1.2e-30	34.1
WP_012211251.1\|105291_106533_+	PDZ domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	1.1e-17	29.4
WP_003628556.1\|106997_107477_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_079227915.1\|107587_107857_+	hypothetical protein	NA	NA	NA	NA
WP_012211252.1\|107985_108870_-	proline-specific peptidase family protein	NA	NA	NA	NA
WP_012211253.1\|108878_109532_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_101853684.1\|109535_110885_-	ABC transporter ATP-binding protein	A0A1V0SI78	Klosneuvirus	2.1e-11	23.1
WP_012211358.1\|111025_112204_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012211255.1\|112422_113364_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_101812567.1\|114452_114941_-\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	4.9e-11	33.8
WP_012211256.1\|115032_115929_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_003625378.1\|115943_116504_-	LemA family protein	A0A1X9IGG1	Lactococcus_phage	1.2e-13	33.7
WP_012211257.1\|116570_117677_-	cation transporter	NA	NA	NA	NA
WP_003625382.1\|117854_118259_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_003548644.1\|118591_118732_+	hypothetical protein	NA	NA	NA	NA
WP_072749128.1\|118837_119539_+	hypothetical protein	NA	NA	NA	NA
WP_158648614.1\|119719_120949_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.3e-124	58.2
WP_003629452.1\|122108_122342_-	hypothetical protein	NA	NA	NA	NA
WP_012211259.1\|122506_123154_+	HD domain-containing protein	NA	NA	NA	NA
WP_003629454.1\|123154_124072_+	HNH endonuclease	NA	NA	NA	NA
WP_012211261.1\|124124_124880_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-28	36.7
WP_101853686.1\|124879_126493_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_012211263.1\|126820_127453_-	3-methyladenine DNA glycosylase	NA	NA	NA	NA
WP_101853687.1\|127593_129000_-\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

179854 : 249343

Klosneuvirus(13.33%)

protease,holin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079227860.1\|179854_179962_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_101853698.1\|180119_180521_-	hypothetical protein	NA	NA	NA	NA
WP_012211302.1\|180757_180973_+	hypothetical protein	NA	NA	NA	NA
WP_101853699.1\|181806_183141_+	S-layer protein	NA	NA	NA	NA
WP_101853700.1\|185143_186367_+	N-acetylmuramidase	S5M9Y4	Brevibacillus_phage	7.8e-13	36.3
WP_012211305.1\|186385_187477_+	amidase	A0A2H4JAS1	uncultured_Caudovirales_phage	1.3e-19	26.9
WP_012211358.1\|187626_188805_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853701.1\|189033_190440_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_003630530.1\|190567_192403_+	potassium transporter	NA	NA	NA	NA
WP_012211306.1\|192520_193255_+	DUF4065 domain-containing protein	Q9AZG0	Lactococcus_phage	6.5e-31	31.6
WP_065866883.1\|193431_194838_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_003630533.1\|195208_196174_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_035513470.1\|196183_196975_-	hypothetical protein	NA	NA	NA	NA
WP_012211308.1\|199421_200114_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_012211309.1\|200336_200939_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_003625545.1\|201002_201563_+	aldose 1-epimerase	NA	NA	NA	NA
WP_012211310.1\|201664_202774_+	LytR family transcriptional regulator	NA	NA	NA	NA
WP_012211311.1\|202773_203391_+	membrane protein	NA	NA	NA	NA
WP_101853702.1\|203426_206417_+	LTA synthase family protein	NA	NA	NA	NA
WP_101853703.1\|206502_207888_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_012211314.1\|208141_209404_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	3.0e-84	42.1
WP_003630682.1\|209825_210182_+	hypothetical protein	NA	NA	NA	NA
WP_023190539.1\|210487_211801_+	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	3.3e-62	33.0
WP_072749122.1\|211800_212457_+	HD domain-containing protein	NA	NA	NA	NA
WP_072749101.1\|212572_213715_+	guanosine monophosphate reductase	A0A1V0SHK8	Klosneuvirus	1.3e-62	34.0
WP_012211323.1\|215224_215650_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_003625564.1\|215896_216358_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_012211324.1\|216446_217109_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_012211325.1\|217269_217869_-	DUF159 family protein	NA	NA	NA	NA
WP_012211326.1\|217993_219016_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003625568.1\|219040_219520_+	hypothetical protein	A7KUY9	Bacillus_phage	5.2e-37	59.0
WP_012211327.1\|219500_220118_+	TPM domain-containing protein	NA	NA	NA	NA
WP_101853704.1\|220415_223079_+	magnesium-translocating P-type ATPase	M1HXH2	Paramecium_bursaria_Chlorella_virus	1.3e-36	24.4
WP_012211329.1\|223171_225148_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.3e-99	39.2
WP_012211330.1\|225147_225915_+	TatD family hydrolase	NA	NA	NA	NA
WP_012211331.1\|225901_226468_+	ribonuclease M5	NA	NA	NA	NA
WP_012211332.1\|226457_227342_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003625575.1\|227404_227662_+	Veg protein	NA	NA	NA	NA
WP_012211334.1\|227780_228611_+	pur operon repressor	NA	NA	NA	NA
WP_012211335.1\|228657_230043_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	1.0e-29	34.0
WP_012211336.1\|230274_230880_+	S-layer protein	NA	NA	NA	NA
WP_101853705.1\|230965_232117_+	cell separation protein	NA	NA	NA	NA
WP_041810677.1\|232252_233647_+	cell division protein	NA	NA	NA	NA
WP_012211338.1\|233887_234862_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	8.6e-47	36.8
WP_012211339.1\|235891_236167_-	hypothetical protein	NA	NA	NA	NA
WP_012211340.1\|236194_237559_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-31	32.6
WP_003625587.1\|237672_238074_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_023190547.1\|238120_238678_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003625589.1\|238795_240415_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	5.6e-136	47.2
WP_012211342.1\|240544_241840_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_072749096.1\|242194_242584_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_012211344.1\|242639_244064_-	C69 family dipeptidase	NA	NA	NA	NA
WP_012211345.1\|244144_244969_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_012211346.1\|245068_246343_-	purine permease	Q9KX94	Enterobacteria_phage	1.4e-28	27.9
WP_012211347.1\|246346_246925_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_035504367.1\|247198_247801_-	hypothetical protein	NA	NA	NA	NA
WP_146211431.1\|248113_249343_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.7e-122	57.4

DBSCAN-SWA_3

254278 : 294382

Aeromonas_phage(11.11%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211358.1\|254278_255457_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_003625618.1\|255888_257124_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.2e-101	53.2
WP_012211356.1\|257251_258529_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	20.3
WP_101853706.1\|261033_262212_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012211358.1\|262965_264144_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853707.1\|264668_265736_+	cell surface protein	NA	NA	NA	NA
WP_101853708.1\|265936_267652_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	4.6e-88	36.9
WP_041810683.1\|267890_269075_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.6e-122	58.8
WP_012211360.1\|269261_270092_-	HAD family hydrolase	NA	NA	NA	NA
WP_003625728.1\|270276_270522_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003625729.1\|270648_272016_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_012211361.1\|272028_273540_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.8e-70	39.1
WP_003625735.1\|273622_273979_+	holo-ACP synthase	NA	NA	NA	NA
WP_012211362.1\|273981_275112_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	7.2e-29	27.7
WP_003631233.1\|275895_276603_-	CBS domain-containing protein	NA	NA	NA	NA
WP_101812593.1\|276790_277762_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_012211364.1\|277896_278454_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_101812594.1\|278455_281953_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_003625749.1\|281964_282207_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_012211366.1\|282272_282650_+	septum formation initiator family protein	NA	NA	NA	NA
WP_023190461.1\|282649_283012_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_014562984.1\|283052_284309_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_012211368.1\|284403_286569_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	3.0e-108	47.8
WP_003625760.1\|286621_287512_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_101812595.1\|287586_288615_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_023190458.1\|288630_290181_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.5e-82	35.6
WP_003625767.1\|291341_291797_+	GAF domain-containing protein	NA	NA	NA	NA
WP_023190455.1\|291901_294382_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	4.8e-118	33.3

DBSCAN-SWA_4

375307 : 474707

Staphylococcus_phage(12.9%)

transposase,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211427.1\|375307_376042_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_012211428.1\|376025_376598_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_023061461.1\|376648_377698_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.1e-50	35.2
WP_012211430.1\|377766_379044_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.3e-12	21.7
WP_012211431.1\|379221_381135_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	6.0e-60	31.4
WP_003625963.1\|381308_381956_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_012211433.1\|382095_382554_+	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_012211434.1\|382550_383297_+	hypothetical protein	NA	NA	NA	NA
WP_101812609.1\|384711_385242_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_101853720.1\|385456_387178_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	4.7e-88	36.9
WP_079227838.1\|387196_387490_+	hypothetical protein	NA	NA	NA	NA
WP_023061469.1\|387633_387726_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_012211437.1\|388023_388554_+	hypothetical protein	NA	NA	NA	NA
WP_003627770.1\|388769_389054_+	co-chaperone GroES	A0A221S304	uncultured_virus	1.2e-12	40.7
WP_012211438.1\|389107_390730_+	chaperonin GroEL	A0A240F766	uncultured_virus	4.4e-157	54.0
WP_101854060.1\|390910_393487_+	DNA mismatch repair protein MutS	F2QAF7	Pyramimonas_orientalis_virus	4.6e-39	25.2
WP_012211440.1\|393486_395397_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.8e-55	29.7
WP_012211441.1\|395397_395988_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003627765.1\|396036_397053_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	7.4e-09	32.5
WP_101853721.1\|397102_397537_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_101853722.1\|397672_399124_+	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	9.7e-63	32.2
WP_023190286.1\|399116_400238_+	DNA polymerase IV	A0A1P8CWP4	Bacillus_phage	3.1e-16	24.5
WP_012211446.1\|400297_401254_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_012211447.1\|401246_402608_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.4e-49	32.2
WP_101854061.1\|403224_403671_+	hypothetical protein	NA	NA	NA	NA
WP_012211450.1\|403940_406580_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.1e-63	33.0
WP_003627753.1\|406640_406898_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_014563089.1\|406897_407326_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_003627751.1\|407327_407639_+	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_065866602.1\|407702_410060_+	endonuclease MutS2	Q94M10	Lactobacillus_phage	9.7e-20	48.7
WP_072749072.1\|410160_410472_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	5.9e-18	43.8
WP_101853723.1\|410531_411809_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.8e-10	22.1
WP_101853724.1\|411984_412356_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_012211458.1\|413665_414079_-	YslB family protein	NA	NA	NA	NA
WP_101853725.1\|414155_414959_+	glutamate racemase	NA	NA	NA	NA
WP_003631882.1\|414958_415579_+	XTP/dITP diphosphatase	A0A2P1DNP2	Cassava_brown_streak_virus	8.8e-13	34.0
WP_101853726.1\|416010_417288_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	9.0e-12	22.7
WP_101853727.1\|417390_418554_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	8.6e-54	36.1
WP_101853728.1\|419136_419922_+	hypothetical protein	NA	NA	NA	NA
WP_072749069.1\|419925_420159_+	hypothetical protein	NA	NA	NA	NA
WP_101853701.1\|420310_421717_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_110557998.1\|421824_422106_+	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|422144_423323_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853729.1\|423497_424388_+	MFS transporter	NA	NA	NA	NA
WP_101853701.1\|424797_426204_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_013854558.1\|426357_426615_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_013854557.1\|426604_426994_+	MazF family transcriptional regulator	NA	NA	NA	NA
WP_012211358.1\|427255_428434_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853730.1\|429109_430339_-\|transposase	IS110-like element ISLhe4 family transposase	A0A1X9I619	Streptococcus_phage	1.3e-63	37.6
WP_101853731.1\|430576_431821_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.1e-09	22.3
WP_012211461.1\|431988_432840_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_012211462.1\|432973_433399_+	DUF948 domain-containing protein	NA	NA	NA	NA
WP_012211463.1\|433416_433788_+	hypothetical protein	NA	NA	NA	NA
WP_023191004.1\|433853_434960_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_101853732.1\|435106_436108_+	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	1.8e-20	26.3
WP_101853733.1\|436188_437535_-	glycerophosphodiester phosphodiesterase	A0A173GBD0	Staphylococcus_phage	2.8e-11	26.5
WP_003627737.1\|437651_437972_+	hypothetical protein	NA	NA	NA	NA
WP_101853734.1\|437986_439378_+	bifunctional metallophosphatase/5'-nucleotidase	S4VPC4	Pandoravirus	5.0e-08	23.2
WP_012211468.1\|439361_439985_+	YutD family protein	NA	NA	NA	NA
WP_003632178.1\|439984_440764_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_012211469.1\|440760_441369_+	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_012211470.1\|441382_442033_-	membrane protein	NA	NA	NA	NA
WP_101812611.1\|442041_442971_-	NAD(P)/FAD-dependent oxidoreductase	A0A2K9L162	Tupanvirus	4.1e-14	25.2
WP_003627915.1\|451881_453045_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_012211472.1\|453058_454102_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_014563108.1\|454101_455124_+	flippase-like domain-containing protein	NA	NA	NA	NA
WP_012211474.1\|455199_457257_+	LTA synthase family protein	W6LM83	Streptococcus_phage	1.3e-142	45.7
WP_003632304.1\|457323_457557_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_012211475.1\|457631_459971_+	ribonuclease R	Q0GXV6	Lactococcus_phage	9.5e-84	35.8
WP_003627921.1\|459983_460442_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.1e-43	57.4
WP_158648615.1\|460537_460678_+	hypothetical protein	NA	NA	NA	NA
WP_014918044.1\|462615_462801_+	hypothetical protein	NA	NA	NA	NA
WP_012212191.1\|466160_467051_+	zinc ABC transporter solute-binding protein	NA	NA	NA	NA
WP_023190445.1\|467502_468702_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.8e-139	66.8
WP_012212189.1\|468720_470181_+	MFS transporter	S4TR35	Salmonella_phage	4.9e-06	24.2
WP_023190442.1\|471341_472004_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003627282.1\|472292_474707_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.8

DBSCAN-SWA_5

491119 : 537834

Lactobacillus_phage(83.33%)

terminase,head,integrase,tRNA,transposase,portal,tail,capsid,plate

attL 490710:490729|attR 531583:531602

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
490710:490729	attL	NA	NA	NA	NA
WP_101853736.1\|491119_492241_-	lysin	Q71JA9	Lactobacillus_phage	3.4e-180	83.6
WP_101853737.1\|492303_492693_-	hypothetical protein	L0P6Z4	Lactobacillus_phage	2.0e-10	37.8
WP_060472249.1\|492694_492934_-	hypothetical protein	L0P6E4	Lactobacillus_phage	1.6e-23	72.2
WP_101853738.1\|492917_493199_-	hypothetical protein	NA	NA	NA	NA
WP_101853739.1\|493211_493484_-	hypothetical protein	NA	NA	NA	NA
WP_101853740.1\|493775_494504_-	hypothetical protein	NA	NA	NA	NA
WP_101853741.1\|494906_495773_-	hypothetical protein	F8J1C9	Lactobacillus_phage	1.3e-22	34.4
WP_101853742.1\|495793_497212_-	hypothetical protein	Q20DB8	Lactobacillus_phage	9.7e-07	26.3
WP_101853743.1\|497208_497883_-	DUF2313 domain-containing protein	L0P8N4	Lactobacillus_phage	2.4e-32	48.3
WP_101853744.1\|497875_499021_-\|plate	baseplate J/gp47 family protein	L0P7C2	Lactobacillus_phage	5.5e-170	78.2
WP_101854062.1\|499010_499424_-	DUF2634 domain-containing protein	L0P6H1	Lactobacillus_phage	1.3e-68	98.5
WP_016077058.1\|499449_499794_-	DUF2577 domain-containing protein	L0P6Y6	Lactobacillus_phage	9.0e-60	100.0
WP_101853745.1\|499766_500834_-	hypothetical protein	L0P6D8	Lactobacillus_phage	1.2e-187	92.4
WP_101853746.1\|500830_501529_-	hypothetical protein	L0P8M9	Lactobacillus_phage	2.4e-115	93.1
WP_101854063.1\|501535_502009_-	hypothetical protein	L0P7B8	Lactobacillus_phage	7.5e-57	84.1
WP_101853747.1\|504814_505231_-	hypothetical protein	L0P6Y3	Lactobacillus_phage	1.6e-66	97.1
WP_101853748.1\|505243_505717_-\|tail	phage tail protein	L0P6D4	Lactobacillus_phage	8.9e-82	94.9
WP_101853749.1\|505730_507188_-\|tail	phage tail protein	L0P8M7	Lactobacillus_phage	1.4e-247	90.3
WP_060472264.1\|507191_507395_-	hypothetical protein	L0P7B3	Lactobacillus_phage	2.2e-21	80.6
WP_101853750.1\|507363_507789_-	hypothetical protein	L0P6G4	Lactobacillus_phage	1.8e-73	94.3
WP_101853751.1\|507785_508187_-	HK97 gp10 family phage protein	X2CXN4	Lactobacillus_phage	1.3e-38	54.2
WP_101853752.1\|508183_508546_-	hypothetical protein	A9D9T8	Lactobacillus_prophage	1.9e-39	65.8
WP_101853753.1\|508542_508914_-	hypothetical protein	L0P6D1	Lactobacillus_phage	4.5e-57	89.4
WP_101853754.1\|508930_510007_-\|capsid	capsid protein	L0P8M2	Lactobacillus_phage	1.5e-185	92.2
WP_101853755.1\|510021_510561_-\|capsid	phage capsid protein	L0P7B0	Lactobacillus_phage	2.0e-85	93.9
WP_101853756.1\|511009_512095_-\|head	phage head morphogenesis protein	Q20DD6	Lactobacillus_phage	3.8e-120	58.2
WP_101854064.1\|512097_513549_-\|portal	phage portal protein	X2CY64	Lactobacillus_phage	3.0e-181	67.9
WP_101853757.1\|513554_514778_-\|terminase	PBSX family phage terminase large subunit	A9D9R9	Lactobacillus_prophage	7.8e-138	58.0
WP_101853758.1\|514779_515283_-\|terminase	terminase small subunit	Q20DD9	Lactobacillus_phage	2.0e-47	60.4
WP_101853759.1\|515738_515960_-	hypothetical protein	NA	NA	NA	NA
WP_101853760.1\|516834_517275_-	hypothetical protein	L0P6G6	Lactobacillus_phage	2.2e-71	91.1
WP_101854065.1\|517392_517932_-	hypothetical protein	NA	NA	NA	NA
WP_101853761.1\|517924_518119_-	hypothetical protein	NA	NA	NA	NA
WP_101853762.1\|518108_518447_-	VRR-NUC domain-containing protein	L0P7E5	Lactobacillus_phage	1.6e-48	81.1
WP_101853763.1\|518490_518736_-	hypothetical protein	NA	NA	NA	NA
WP_101853764.1\|519135_520449_-	hypothetical protein	U3PCP1	Lactobacillus_phage	1.0e-111	50.6
WP_110540398.1\|520811_520913_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_101853765.1\|520902_521706_-	DNA primase	U3PBE3	Lactobacillus_phage	3.1e-87	65.4
WP_101853766.1\|521783_522086_-	hypothetical protein	NA	NA	NA	NA
WP_101853767.1\|522102_522690_-	single-stranded DNA-binding protein	U3PDN3	Lactobacillus_phage	1.8e-44	48.7
WP_101853768.1\|522692_523454_-	AAA family ATPase	U3PIS9	Lactobacillus_phage	6.4e-74	60.8
WP_101853769.1\|523446_523650_-	helix-turn-helix transcriptional regulator	Q6SE98	Lactobacillus_prophage	9.5e-09	45.8
WP_101853770.1\|523729_524047_+	hypothetical protein	A0A1B0YA89	Lactobacillus_phage	1.7e-12	37.3
WP_101853771.1\|524043_524223_-	hypothetical protein	NA	NA	NA	NA
WP_101853772.1\|524219_525491_-	DEAD/DEAH box helicase	U3PFS7	Lactobacillus_phage	9.6e-131	57.3
WP_101853773.1\|525623_525968_-	hypothetical protein	NA	NA	NA	NA
WP_101853774.1\|525970_526321_-	hypothetical protein	NA	NA	NA	NA
WP_101853775.1\|526317_526794_-	hypothetical protein	A0A0A1EL06	Lactobacillus_phage	2.5e-23	40.3
WP_101853776.1\|527003_527303_-	hypothetical protein	NA	NA	NA	NA
WP_101853777.1\|527313_528120_-	phage repressor protein/antirepressor Ant	L0P8P6	Lactobacillus_phage	1.3e-112	79.8
WP_101853778.1\|528125_528335_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101853779.1\|528596_528944_+	helix-turn-helix transcriptional regulator	A0A097QQ00	Enterococcus_phage	3.3e-09	40.0
WP_101853780.1\|528948_529353_+	ImmA/IrrE family metallo-endopeptidase	Q6SEA2	Lactobacillus_prophage	4.8e-20	37.5
WP_101853781.1\|529398_530274_+	hypothetical protein	Q38183	Lactococcus_phage	1.7e-17	36.6
WP_101853782.1\|530435_531557_+\|integrase	tyrosine-type recombinase/integrase	A0A0M9JJ77	Lactobacillus_phage	8.9e-72	41.4
WP_012212178.1\|532450_534136_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	6.0e-72	31.4
531583:531602	attR	NA	NA	NA	NA
WP_003627244.1\|534246_535158_+	class II fructose-bisphosphate aldolase family protein	NA	NA	NA	NA
WP_023192090.1\|535229_535748_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003627240.1\|535750_536020_+	hypothetical protein	NA	NA	NA	NA
WP_003627237.1\|536167_536452_+	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|536655_537834_+\|transposase	IS256 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

563463 : 676944

Bacillus_phage(31.82%)

protease,transposase,integrase,tRNA

attL 630326:630370|attR 632361:632405

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012212149.1\|563463_564117_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_012212148.1\|564187_564508_+	thioredoxin family protein	NA	NA	NA	NA
WP_012212147.1\|564527_565175_+\|tRNA	DUF4479 and tRNA-binding domain-containing protein	NA	NA	NA	NA
WP_041810733.1\|565226_566534_-	hypothetical protein	NA	NA	NA	NA
WP_025283820.1\|568235_568433_+	hypothetical protein	NA	NA	NA	NA
WP_041810732.1\|568540_569149_+\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	5.2e-34	42.0
WP_012212125.1\|569178_570504_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	7.3e-57	36.3
WP_041810805.1\|570868_571255_+	ABC transporter permease	NA	NA	NA	NA
WP_101812617.1\|571592_576563_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	3.1e-15	32.8
WP_101853673.1\|576690_577968_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_101853787.1\|578199_579477_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.2e-10	23.2
WP_101853788.1\|579612_580848_-\|transposase	IS3-like element ISLhe6 family transposase	A0A1B1P773	Bacillus_phage	9.8e-56	47.3
WP_003629734.1\|580903_581548_-	hypothetical protein	NA	NA	NA	NA
WP_041810731.1\|581582_582215_-	hypothetical protein	A0A0E3XCL7	Enterococcus_phage	4.1e-18	62.2
WP_003629717.1\|582392_582569_-	hypothetical protein	NA	NA	NA	NA
WP_012212143.1\|582787_583240_+	hypothetical protein	NA	NA	NA	NA
WP_012212142.1\|583394_584708_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_003627174.1\|584762_585740_-	hypothetical protein	NA	NA	NA	NA
WP_003627172.1\|585828_587343_-	M1 family metallopeptidase	NA	NA	NA	NA
WP_012212141.1\|587480_588458_+	hypothetical protein	NA	NA	NA	NA
WP_012212140.1\|588864_589179_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_003629702.1\|589196_590078_+	SPFH domain-containing protein	NA	NA	NA	NA
WP_012212137.1\|593552_596087_+	CRISPR-associated helicase/endonuclease Cas3	A0A2R2ZGW0	Clostridioides_phage	2.6e-10	20.8
WP_012212136.1\|596101_596845_+	type I-C CRISPR-associated protein Cas5	NA	NA	NA	NA
WP_012212135.1\|596844_598818_+	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA
WP_012212134.1\|598820_599672_+	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA
WP_012212133.1\|599674_600331_+	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_012212132.1\|600327_601359_+	type I-C CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_014563208.1\|601368_601659_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_101853789.1\|604316_606980_+	DNA polymerase I	F8WQ35	Bacillus_phage	8.9e-62	30.6
WP_101853790.1\|606988_607819_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	1.6e-17	25.9
WP_023190881.1\|607815_608418_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_003627138.1\|608420_608888_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_023190882.1\|608890_610222_+	hypothetical protein	NA	NA	NA	NA
WP_014918447.1\|610253_611162_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	9.2e-27	28.1
WP_012212129.1\|611452_613387_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.6e-97	33.2
WP_041810730.1\|614199_614730_+	hypothetical protein	NA	NA	NA	NA
WP_012212126.1\|614920_615529_+\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	4.0e-34	43.2
WP_101853791.1\|615558_616884_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	2.8e-56	36.3
WP_012212124.1\|618088_618382_+	ACT domain-containing protein	NA	NA	NA	NA
WP_012212123.1\|618388_619639_+	DUF389 domain-containing protein	NA	NA	NA	NA
WP_072748849.1\|621624_622158_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	8.9e-14	37.5
WP_003627120.1\|622179_622380_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_003627118.1\|622423_622780_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_012212121.1\|622925_623450_+	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA
WP_012212120.1\|623442_624552_+	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA
WP_065866556.1\|624562_625237_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_003627112.1\|625217_625811_+	HD domain-containing protein	NA	NA	NA	NA
WP_003627111.1\|625832_626180_+	ribosome silencing factor	NA	NA	NA	NA
WP_012212118.1\|626185_627337_+	nucleotidyltransferase	NA	NA	NA	NA
WP_023191246.1\|627338_627893_+	hypothetical protein	NA	NA	NA	NA
WP_003627105.1\|628055_628772_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.8e-25	30.1
WP_072748850.1\|628758_630318_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
630326:630370	attL	NA	NA	NA	NA
WP_014563241.1\|630420_631785_+	SlpX	NA	NA	NA	NA
WP_014563242.1\|631878_632256_+\|integrase	tyrosine-type recombinase/integrase	H0USV4	Bacillus_phage	2.9e-11	42.2
WP_101853792.1\|632404_633682_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.9e-09	23.5
632361:632405	attR	NA	NA	NA	NA
WP_072748852.1\|633859_634348_-\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_101853793.1\|634395_635364_-	membrane protein insertase YidC	NA	NA	NA	NA
WP_014563247.1\|635410_635683_-	acylphosphatase	NA	NA	NA	NA
WP_072748853.1\|635780_636548_+	RNA methyltransferase	NA	NA	NA	NA
WP_012212112.1\|636659_637010_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012212111.1\|637294_638344_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	5.3e-34	37.3
WP_012212110.1\|638347_640762_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_012212109.1\|640838_641315_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_012212108.1\|641377_642292_+	L-lactate dehydrogenase	NA	NA	NA	NA
WP_035513757.1\|642479_642821_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_003627088.1\|642789_643086_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023190294.1\|645881_646805_-	N-acetylglucosamine kinase	NA	NA	NA	NA
WP_012211358.1\|646950_648129_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012212106.1\|648292_650884_-	YfhO family protein	NA	NA	NA	NA
WP_023190296.1\|650974_653083_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_101853794.1\|653159_653309_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_003627079.1\|653357_653918_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_012212104.1\|653938_654619_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_012212103.1\|654619_654847_+	YqgQ family protein	NA	NA	NA	NA
WP_012212102.1\|654905_655307_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_012212101.1\|655385_656306_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003627067.1\|658068_659406_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_012212100.1\|660517_661423_+	hypothetical protein	NA	NA	NA	NA
WP_072748857.1\|661523_662522_+	hypothetical protein	NA	NA	NA	NA
WP_101853795.1\|664092_665085_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	9.0e-52	38.4
WP_101853796.1\|665189_666146_-	beta-galactosidase small subunit	NA	NA	NA	NA
WP_101853797.1\|666129_668016_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	5.3e-93	33.5
WP_101853798.1\|668240_669044_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_012212095.1\|669241_670249_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_101854066.1\|672559_674479_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_012212092.1\|675708_676944_-\|transposase	IS3-like element ISLhe6 family transposase	A0A1B1P773	Bacillus_phage	2.2e-55	46.9

DBSCAN-SWA_7

705781 : 784638

Burkholderia_virus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211358.1\|705781_706960_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_003627719.1\|708769_709999_+	MFS transporter	NA	NA	NA	NA
WP_012212078.1\|710071_711946_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_065866883.1\|712078_713485_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_012212077.1\|715706_716324_+	amidohydrolase family protein	NA	NA	NA	NA
WP_012212076.1\|716326_716908_+	amidohydrolase family protein	NA	NA	NA	NA
WP_065866883.1\|717568_718975_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_012211358.1\|719095_720274_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_158298623.1\|720551_720689_-	hypothetical protein	NA	NA	NA	NA
WP_012212074.1\|721091_722258_+	galactokinase	NA	NA	NA	NA
WP_101853801.1\|722279_723743_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_012212072.1\|723863_724859_+	galactose mutarotase	NA	NA	NA	NA
WP_065866524.1\|724979_725420_+	hypothetical protein	NA	NA	NA	NA
WP_101812630.1\|725528_726356_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_012212071.1\|728219_729392_+	MFS transporter	NA	NA	NA	NA
WP_003629414.1\|729410_729818_+	OsmC family protein	NA	NA	NA	NA
WP_012212070.1\|729837_730542_+	oxidoreductase	NA	NA	NA	NA
WP_101853673.1\|731515_732793_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_012212067.1\|734068_734575_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|734849_736028_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853802.1\|736111_737587_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_012211430.1\|737647_738925_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	5.3e-12	21.7
WP_012212065.1\|739187_742400_+	type I restriction-modification system endonuclease	A0A1B1IW48	uncultured_Mediterranean_phage	7.3e-10	28.9
WP_101853803.1\|742420_743875_+	type I restriction-modification system subunit M	J7I0U9	Acinetobacter_phage	8.9e-24	26.5
WP_012212063.1\|745344_745959_+	hypothetical protein	NA	NA	NA	NA
WP_012212062.1\|746041_747286_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_012212061.1\|747525_748710_+	hypothetical protein	NA	NA	NA	NA
WP_101854067.1\|750378_750999_-	hypothetical protein	NA	NA	NA	NA
WP_035514433.1\|754641_754968_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_012212056.1\|754969_755854_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
WP_012212055.1\|755868_756531_-	serine dehydratase	NA	NA	NA	NA
WP_101853805.1\|756679_757858_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023191368.1\|758443_758740_+	hypothetical protein	NA	NA	NA	NA
WP_023191369.1\|758874_760110_+	MFS transporter	NA	NA	NA	NA
WP_101854068.1\|760166_762791_-	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	1.1e-83	30.0
WP_101854069.1\|763953_764337_-	ABC transporter permease	NA	NA	NA	NA
WP_023191373.1\|764720_764999_+	hypothetical protein	NA	NA	NA	NA
WP_003627631.1\|765223_765847_-	orotate phosphoribosyltransferase	A0A0B5IW17	Pandoravirus	9.1e-26	32.9
WP_003629217.1\|765848_766553_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_101853806.1\|766807_767731_+	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_101853807.1\|767897_768440_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_079227881.1\|768578_769844_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_101853808.1\|770054_771011_+	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.7e-26	34.1
WP_101853809.1\|771010_772288_+	dihydroorotase	NA	NA	NA	NA
WP_012212046.1\|772287_773373_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	1.3e-56	36.1
WP_012212413.1\|773365_776554_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_157952330.1\|778806_778959_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_101853810.1\|779136_780000_+	sugar transporter	NA	NA	NA	NA
WP_003627617.1\|780115_780397_+	hypothetical protein	NA	NA	NA	NA
WP_003627616.1\|780389_780815_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_101853811.1\|780866_783248_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_012211358.1\|783459_784638_-\|transposase	IS256 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

791236 : 851900

Enterococcus_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012212126.1\|791236_791845_+\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	4.0e-34	43.2
WP_101853813.1\|793404_794430_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_101853814.1\|794568_795936_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_003627604.1\|796102_796414_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_003629151.1\|796432_796723_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_003627602.1\|796832_797942_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_012212036.1\|798025_798595_+	elongation factor P	NA	NA	NA	NA
WP_012212035.1\|798612_799038_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_012212034.1\|799045_799438_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_052540998.1\|799496_800345_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.5e-42	43.1
WP_101812650.1\|800482_801532_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.4e-47	35.4
WP_052540998.1\|801655_802504_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.5e-42	43.1
WP_003627596.1\|802493_803837_+	exodeoxyribonuclease VII large subunit	A0A160DEV2	Gordonia_phage	7.7e-30	32.1
WP_003627595.1\|803839_804082_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_023190671.1\|804084_804954_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_101812652.1\|804954_805767_+	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_012212030.1\|805777_807460_+	DNA repair protein RecN	NA	NA	NA	NA
WP_101853815.1\|808098_809505_+\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_003627588.1\|809638_810253_+	guanylate kinase	A0A212Q4J6	Cowpox_virus	6.2e-19	29.8
WP_003627587.1\|810255_810480_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_020829296.1\|810530_812930_+	primosomal protein N'	NA	NA	NA	NA
WP_020829295.1\|812943_813888_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	6.2e-10	30.2
WP_003627583.1\|813838_815203_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_003629102.1\|815207_815963_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_003627581.1\|815952_817968_+	Stk1 family PASTA domain-containing Ser/Thr kinase	Q8QNG7	Ectocarpus_siliculosus_virus	1.8e-19	29.2
WP_003627580.1\|817968_818859_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_003627579.1\|818871_819522_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_101853816.1\|819521_820208_+	thiamine diphosphokinase	NA	NA	NA	NA
WP_003627577.1\|820249_820555_+	hypothetical protein	NA	NA	NA	NA
WP_003627575.1\|820661_820847_-	50S ribosomal protein L28	NA	NA	NA	NA
WP_003547910.1\|821002_821365_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003627574.1\|821386_823048_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_012212019.1\|823049_825080_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_020829293.1\|825100_826102_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_003627571.1\|826132_826375_+	acyl carrier protein	E3SSM9	Prochlorococcus_phage	8.1e-07	56.1
WP_003627570.1\|826496_827531_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-14	28.2
WP_003629095.1\|827534_828521_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-13	28.1
WP_012212411.1\|828523_829483_+	ABC transporter permease	NA	NA	NA	NA
WP_003627565.1\|829497_830427_+	ABC transporter permease	NA	NA	NA	NA
WP_101853817.1\|830631_832383_+	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_101853673.1\|832580_833858_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_003627561.1\|835936_836623_+	ribonuclease III	M1HR51	Paramecium_bursaria_Chlorella_virus	8.2e-20	30.6
WP_101853818.1\|836638_840208_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_101853819.1\|840208_841501_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_003627558.1\|841543_842965_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003627557.1\|843164_843452_+	hypothetical protein	NA	NA	NA	NA
WP_003629078.1\|843518_844946_-	amino acid permease	NA	NA	NA	NA
WP_080516431.1\|845071_846028_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.2e-26	32.0
WP_003627552.1\|846142_846484_+	transcriptional regulator	NA	NA	NA	NA
WP_003627550.1\|846488_847919_+	signal recognition particle protein	NA	NA	NA	NA
WP_003627549.1\|848009_848282_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_003629074.1\|848350_848866_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003629072.1\|848855_849575_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003629071.1\|849687_850035_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_101853701.1\|850493_851900_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

855117 : 923840

Streptococcus_phage(18.75%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096001375.1\|855117_856347_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.5e-64	37.9
WP_012211358.1\|858761_859940_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_041806205.1\|860322_861513_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.2e-122	57.9
WP_003629024.1\|865923_867867_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	1.2e-60	28.4
WP_003629023.1\|867924_869106_-	class I SAM-dependent methyltransferase	A0A2K9L4K8	Tupanvirus	4.7e-47	36.1
WP_003629022.1\|869160_869775_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_003629021.1\|869840_870872_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_003627530.1\|871033_871807_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_003627529.1\|871840_872866_+	elongation factor Ts	NA	NA	NA	NA
WP_003629020.1\|873004_873730_+	UMP kinase	NA	NA	NA	NA
WP_003627525.1\|873729_874287_+	ribosome recycling factor	NA	NA	NA	NA
WP_003627524.1\|874289_875024_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.5e-22	39.0
WP_101853820.1\|875025_875841_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_020829285.1\|875851_877108_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_072748898.1\|877150_878848_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_012212004.1\|878853_883170_+	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	1.2e-18	34.1
WP_012212003.1\|883279_883756_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_101854070.1\|883775_884957_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_012212001.1\|884965_885262_+	YlxR family protein	NA	NA	NA	NA
WP_003627514.1\|885264_885576_+	50S ribosomal protein L7ae	NA	NA	NA	NA
WP_101853821.1\|885580_888193_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	9.7e-21	24.5
WP_012211999.1\|888212_888578_+	ribosome-binding factor A	NA	NA	NA	NA
WP_003629013.1\|888629_889523_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_023192476.1\|889543_890491_+	riboflavin biosynthesis protein RibF	A0A1V0SD03	Indivirus	6.0e-05	30.1
WP_101853822.1\|890660_891710_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_101853823.1\|891725_892325_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_012211996.1\|892342_894169_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.8e-143	49.5
WP_012211995.1\|894250_895405_+	molecular chaperone DnaJ	A0A167RAM8	Powai_lake_megavirus	1.4e-19	29.0
WP_072748903.1\|895879_897718_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	5.2e-21	24.1
WP_003627502.1\|897720_898410_+	class A sortase	NA	NA	NA	NA
WP_012211993.1\|898530_900804_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.7e-77	35.9
WP_101853824.1\|900908_901436_+	adenine phosphoribosyltransferase	NA	NA	NA	NA
WP_012211992.1\|901579_902509_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	2.2e-100	59.5
WP_023061378.1\|902524_903319_-	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_012211989.1\|905072_905573_+	putative lactocepin s-layer protein	NA	NA	NA	NA
WP_101853825.1\|905726_907430_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	5.1e-87	36.7
WP_101853826.1\|907435_909709_-	HAD-IC family P-type ATPase	A7IUR5	Paramecium_bursaria_Chlorella_virus	1.6e-43	25.3
WP_012211987.1\|909837_910692_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012211358.1\|912052_913231_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_014918653.1\|916796_917333_+	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
WP_072748906.1\|917453_918620_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003627474.1\|918799_919405_+	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA
WP_101853676.1\|919571_920600_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	2.6e-46	34.7
WP_012211982.1\|921149_922028_-	YitT family protein	NA	NA	NA	NA
WP_101853701.1\|922433_923840_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

967322 : 1025348

Bacillus_phage(14.29%)

transposase,integrase,tRNA

attL 967389:967404|attR 1030888:1030903

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211950.1\|967322_968621_+\|tRNA	asparagine--tRNA ligase	M1PB22	Moumouvirus	2.3e-47	27.8
967389:967404	attL	NA	NA	NA	NA
WP_012211949.1\|968706_969351_+	DnaD domain protein	A0A0N7AE27	Bacillus_phage	4.2e-10	36.0
WP_012211948.1\|969352_969973_+	endonuclease III	NA	NA	NA	NA
WP_101853830.1\|970188_972468_-	penicillin-binding protein	NA	NA	NA	NA
WP_101853831.1\|972464_973097_-	Holliday junction resolvase RecU	A0A1B1P798	Bacillus_phage	1.6e-17	31.2
WP_012211945.1\|973160_973730_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_101853832.1\|973820_974237_+	DivIVA domain-containing protein	NA	NA	NA	NA
WP_012211943.1\|974700_975825_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_101853833.1\|977402_979079_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_012211941.1\|979085_979550_+	signal peptidase II	NA	NA	NA	NA
WP_012211940.1\|979542_980454_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.0e-09	29.1
WP_101853834.1\|980456_981512_+	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA
WP_012211938.1\|981515_984707_+	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA
WP_012211937.1\|984774_986469_-	fibronectin/fibrinogen-binding protein	Q84500	Paramecium_bursaria_Chlorella_virus	3.2e-09	40.0
WP_101853835.1\|986617_987034_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_012211936.1\|987109_987991_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	4.4e-10	35.9
WP_101853706.1\|988220_989399_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_014563506.1\|989573_990656_-	tyrosine recombinase XerS	NA	NA	NA	NA
WP_012211934.1\|991171_991627_+	hypothetical protein	NA	NA	NA	NA
WP_012211933.1\|991633_992125_+	adenylate kinase	A0A097BYE2	Leuconostoc_phage	5.0e-19	36.1
WP_099046778.1\|992170_992788_-	DUF5052 family protein	A0A2K9VCV0	Lactobacillus_phage	1.9e-39	44.2
WP_080516429.1\|992985_993357_-	hypothetical protein	NA	NA	NA	NA
WP_003626263.1\|993406_993610_-	gametolysin	NA	NA	NA	NA
WP_012211358.1\|994726_995905_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023190409.1\|996182_996428_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_012211358.1\|997576_998755_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023190406.1\|1001009_1001363_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_012211926.1\|1001392_1001977_-	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	8.2e-29	44.6
WP_012211925.1\|1002061_1002997_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_101853836.1\|1003029_1003992_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_101853837.1\|1004142_1006599_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	3.0e-96	31.3
WP_023190404.1\|1006615_1008562_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	2.7e-116	41.0
WP_003626280.1\|1008658_1009285_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003626288.1\|1010935_1011403_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_023190402.1\|1011491_1012010_-	acetyltransferase	NA	NA	NA	NA
WP_023190401.1\|1012223_1013084_+	hypothetical protein	NA	NA	NA	NA
WP_003628766.1\|1013820_1014411_+	hypothetical protein	NA	NA	NA	NA
WP_023190395.1\|1015080_1015320_-	ACT domain-containing protein	NA	NA	NA	NA
WP_012211920.1\|1015475_1016234_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_023190392.1\|1016941_1017550_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_049751273.1\|1017707_1018175_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_101853701.1\|1018331_1019738_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_023190390.1\|1019845_1021186_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_023190388.1\|1021483_1021762_+	Na+/H+ antiporter family protein	NA	NA	NA	NA
WP_012211917.1\|1022018_1022639_-\|integrase	tyrosine-type recombinase/integrase	E2ELN7	Clostridium_phage	7.4e-20	36.4
WP_012211916.1\|1022754_1023393_-	hypothetical protein	NA	NA	NA	NA
WP_003626323.1\|1023704_1024205_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S5PRR3	Streptococcus_phage	1.6e-33	45.4
WP_014563535.1\|1024316_1025348_-\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.8e-34	39.2
1030888:1030903	attR	NA	NA	NA	NA

DBSCAN-SWA_11

1042469 : 1101619

Streptococcus_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065866883.1\|1042469_1043876_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_101853842.1\|1044921_1045935_-	serine hydrolase	NA	NA	NA	NA
WP_012211901.1\|1046136_1047540_+	dipeptidase PepV	NA	NA	NA	NA
WP_101853788.1\|1047593_1048829_-\|transposase	IS3-like element ISLhe6 family transposase	A0A1B1P773	Bacillus_phage	9.8e-56	47.3
WP_101853843.1\|1048898_1050278_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_023190890.1\|1050660_1050996_-	hypothetical protein	NA	NA	NA	NA
WP_012211898.1\|1052029_1052269_-	hypothetical protein	NA	NA	NA	NA
WP_101812669.1\|1053799_1054441_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_041810719.1\|1054485_1054716_-	replication-associated protein RepA	NA	NA	NA	NA
WP_012211895.1\|1054879_1055413_-	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_101854072.1\|1057318_1058566_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_101854073.1\|1061271_1062432_-	amidohydrolase	NA	NA	NA	NA
WP_101853706.1\|1062569_1063748_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023191318.1\|1064536_1065868_-	amino acid permease	NA	NA	NA	NA
WP_003619518.1\|1066164_1066530_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_101853701.1\|1066667_1068074_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_072748931.1\|1068315_1070262_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	3.0e-59	28.8
WP_101853844.1\|1070448_1072341_-	hypothetical protein	Q6SEF9	Lactobacillus_prophage	2.0e-15	50.5
WP_072748932.1\|1072400_1074887_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_101853845.1\|1075071_1075461_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1075528_1076707_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_041810715.1\|1076866_1077304_-	hypothetical protein	NA	NA	NA	NA
WP_101853846.1\|1077452_1079033_+	hypothetical protein	NA	NA	NA	NA
WP_012211872.1\|1079140_1079857_-	hypothetical protein	NA	NA	NA	NA
WP_023061630.1\|1079856_1080591_-	hypothetical protein	NA	NA	NA	NA
WP_012211870.1\|1080594_1081356_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-22	34.7
WP_023061631.1\|1081367_1081580_-	hypothetical protein	NA	NA	NA	NA
WP_101853847.1\|1081858_1083265_+\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_012211358.1\|1083608_1084787_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101812682.1\|1085082_1086687_-	ABC transporter ATP-binding protein	A0A2H4UU96	Bodo_saltans_virus	5.1e-12	29.4
WP_023191193.1\|1086661_1086949_-	hypothetical protein	NA	NA	NA	NA
WP_003628570.1\|1087300_1088914_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_023061883.1\|1090886_1092401_-	ABC-F type ribosomal protection protein	A0A1B0RXA0	Streptococcus_phage	1.2e-23	23.7
WP_101812684.1\|1092715_1092943_+	hypothetical protein	NA	NA	NA	NA
WP_012211867.1\|1092989_1094849_-	hypothetical protein	F2Y1C6	Organic_Lake_phycodnavirus	1.5e-07	32.1
WP_003626445.1\|1095060_1095489_-	DUF3021 domain-containing protein	NA	NA	NA	NA
WP_003628533.1\|1095485_1095920_-	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_023061886.1\|1096104_1096692_-	hypothetical protein	NA	NA	NA	NA
WP_023061888.1\|1096982_1097240_-	DUF3923 family protein	NA	NA	NA	NA
WP_101812685.1\|1097278_1099783_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.2e-137	32.0
WP_101853848.1\|1099798_1100341_-	GNAT family N-acetyltransferase	E4ZFP7	Streptococcus_phage	8.8e-17	30.2
WP_101853706.1\|1100440_1101619_+\|transposase	IS256 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1105197 : 1169387

Aureococcus_anophage(14.29%)

protease,tRNA,integrase,transposase

attL 1121209:1121225|attR 1155208:1155224

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101812686.1\|1105197_1108131_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	4.4e-86	36.6
WP_101812687.1\|1108744_1109236_-	DUF5067 domain-containing protein	NA	NA	NA	NA
WP_014563645.1\|1109345_1109705_-	hypothetical protein	NA	NA	NA	NA
WP_003626474.1\|1110095_1110719_-	NUDIX hydrolase	NA	NA	NA	NA
WP_020829165.1\|1110721_1111483_-	nucleoside phosphorylase	NA	NA	NA	NA
WP_012211860.1\|1111498_1111918_-	cytidine deaminase	NA	NA	NA	NA
WP_012211859.1\|1112181_1112658_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_023191272.1\|1112747_1113185_+	hypothetical protein	NA	NA	NA	NA
WP_101853849.1\|1113364_1114543_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	8.3e-121	57.5
WP_101812689.1\|1114653_1115364_+	GNAT family acetyltransferase	NA	NA	NA	NA
WP_003626488.1\|1115452_1116634_+	MFS transporter	NA	NA	NA	NA
WP_003628501.1\|1116699_1117281_+	hypothetical protein	NA	NA	NA	NA
WP_012211856.1\|1117370_1117988_-	Fic family protein	NA	NA	NA	NA
WP_014563664.1\|1118250_1118796_-	hypothetical protein	NA	NA	NA	NA
WP_023191942.1\|1118708_1119212_-	hypothetical protein	NA	NA	NA	NA
WP_012211854.1\|1119384_1119762_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_003628493.1\|1119774_1120515_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_012211853.1\|1120521_1122105_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	1.1e-19	26.5
1121209:1121225	attL	NA	NA	NA	NA
WP_014563667.1\|1122094_1123642_-	ATP-binding cassette domain-containing protein	A0A076FI99	Aureococcus_anophage	1.2e-15	22.1
WP_101853673.1\|1123918_1125196_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_003628488.1\|1125341_1125692_-	hypothetical protein	NA	NA	NA	NA
WP_023191010.1\|1126233_1126446_-	hypothetical protein	NA	NA	NA	NA
WP_012211851.1\|1126451_1127738_-	peptidase T	NA	NA	NA	NA
WP_012211850.1\|1127896_1129231_+	MATE family efflux transporter	NA	NA	NA	NA
WP_012211849.1\|1129279_1130485_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_012211848.1\|1130566_1131124_-	membrane protein	NA	NA	NA	NA
WP_101853850.1\|1131130_1131892_-	pyridoxal kinase	NA	NA	NA	NA
WP_101853851.1\|1131924_1133103_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012211846.1\|1133398_1134496_-	serine hydrolase	NA	NA	NA	NA
WP_012211845.1\|1134620_1135235_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_012211844.1\|1135335_1135968_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003628456.1\|1136196_1136646_-	Trp operon repressor	NA	NA	NA	NA
WP_012211358.1\|1136873_1138052_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023190807.1\|1138134_1139907_-	DNA helicase RecQ	A0A1V0SBK0	Catovirus	2.9e-77	38.6
WP_101853852.1\|1141335_1142019_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_012211842.1\|1142085_1143345_-	aluminum resistance protein	NA	NA	NA	NA
WP_012211840.1\|1143361_1145458_-	putative ornithine decarboxylase	NA	NA	NA	NA
WP_065866883.1\|1147121_1148528_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_003628346.1\|1150361_1150739_-	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_003628344.1\|1150740_1151124_-	CrcB family protein	A0A2H4PQR0	Staphylococcus_phage	3.1e-08	36.5
WP_101853853.1\|1152784_1153600_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_014563689.1\|1154667_1155567_-	aldose 1-epimerase family protein	NA	NA	NA	NA
1155208:1155224	attR	NA	NA	NA	NA
WP_101853854.1\|1155719_1157123_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IB03	Erwinia_phage	9.8e-28	25.3
WP_003628338.1\|1157133_1157658_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
WP_003626495.1\|1157666_1158575_-	tyrosine recombinase	A0A1P8DJJ6	Virus_Rctr41k	2.3e-14	25.1
WP_023191156.1\|1158574_1159891_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_012211826.1\|1159924_1162039_-	type I DNA topoisomerase	E3T4K4	Cafeteria_roenbergensis_virus	1.5e-96	37.2
WP_003628334.1\|1162110_1162959_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	4.9e-30	36.8
WP_012211825.1\|1163019_1163772_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	1.3e-26	38.6
WP_012211824.1\|1163761_1164613_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_012211823.1\|1164636_1166229_-	sodium:proton antiporter	NA	NA	NA	NA
WP_003626511.1\|1166276_1166507_-	YozE family protein	NA	NA	NA	NA
WP_003626512.1\|1166509_1167340_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	5.3e-21	45.9
WP_003628329.1\|1167456_1168149_+	hemolysin III family protein	NA	NA	NA	NA
WP_012211821.1\|1168187_1169387_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	8.6e-49	34.1

DBSCAN-SWA_13

1196938 : 1348850

117

Bacillus_virus(16.13%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211457.1\|1196938_1197796_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_146226400.1\|1197872_1198205_-	hypothetical protein	NA	NA	NA	NA
WP_101812702.1\|1198248_1198839_-	hypothetical protein	NA	NA	NA	NA
WP_012211799.1\|1199056_1199572_-	hypothetical protein	NA	NA	NA	NA
WP_012211798.1\|1200282_1201218_-	restriction endonuclease	NA	NA	NA	NA
WP_023191213.1\|1202418_1203015_+	DedA family protein	NA	NA	NA	NA
WP_101853860.1\|1203121_1204507_+	amino acid permease	NA	NA	NA	NA
WP_101853861.1\|1207259_1207778_-	HAD-IIB family hydrolase	NA	NA	NA	NA
WP_023191208.1\|1207824_1208661_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.5e-36	36.3
WP_012211793.1\|1208832_1210026_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.7e-41	32.4
WP_065866883.1\|1210530_1211937_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_012211791.1\|1212065_1213250_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_012211790.1\|1213338_1215192_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	2.2e-11	24.4
WP_012211789.1\|1215197_1216484_-\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	1.8e-20	25.3
WP_101853687.1\|1216845_1218252_-\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_012211788.1\|1218398_1218836_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_101812706.1\|1218835_1221076_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	1.3e-10	38.0
WP_079227775.1\|1221090_1221540_-	hypothetical protein	NA	NA	NA	NA
WP_012211786.1\|1221508_1222456_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_012211785.1\|1222516_1223026_+\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_101853862.1\|1224683_1225862_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_003628193.1\|1226103_1226610_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_072748971.1\|1226712_1228059_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_012211782.1\|1229196_1229529_+	hypothetical protein	A0A0P0I7G8	Lactobacillus_phage	4.4e-19	43.6
WP_012211781.1\|1229783_1230164_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_003628186.1\|1230295_1230853_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_012211779.1\|1230865_1232575_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-18	32.6
WP_012211778.1\|1232567_1233401_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_003628182.1\|1233611_1234067_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_023190293.1\|1235451_1236270_-	hypothetical protein	NA	NA	NA	NA
WP_012211776.1\|1236674_1238216_-	citrate lyase subunit alpha	NA	NA	NA	NA
WP_012211775.1\|1238205_1239120_-	citrate lyase	NA	NA	NA	NA
WP_003628158.1\|1239120_1239414_-	citrate lyase acyl carrier protein	NA	NA	NA	NA
WP_012211774.1\|1239403_1240456_-	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
WP_012211772.1\|1240546_1241338_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_012211771.1\|1241416_1242883_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_072748978.1\|1243201_1244515_-	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	1.1e-57	32.3
WP_101853863.1\|1244612_1245146_-	hypothetical protein	NA	NA	NA	NA
WP_101853864.1\|1248273_1249200_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_023190708.1\|1249514_1250162_-	hypothetical protein	NA	NA	NA	NA
WP_072748979.1\|1250231_1250546_-	hypothetical protein	NA	NA	NA	NA
WP_023190710.1\|1250614_1250860_-	hypothetical protein	NA	NA	NA	NA
WP_101853865.1\|1250856_1251693_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_003626645.1\|1251727_1251895_-	hypothetical protein	NA	NA	NA	NA
WP_003628125.1\|1251942_1252245_-	hypothetical protein	NA	NA	NA	NA
WP_101853866.1\|1252231_1252918_-	mucus-binding protein	NA	NA	NA	NA
WP_101853867.1\|1252914_1253235_-	hypothetical protein	NA	NA	NA	NA
WP_025283502.1\|1253529_1254906_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	2.9e-56	32.1
WP_012211762.1\|1254917_1256321_-	class II fumarate hydratase	NA	NA	NA	NA
WP_003626652.1\|1256508_1256733_+	hypothetical protein	NA	NA	NA	NA
WP_012211759.1\|1258201_1258903_-	ABC transporter permease	NA	NA	NA	NA
WP_012211758.1\|1258895_1259957_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-30	35.6
WP_012211757.1\|1259969_1260830_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_101853868.1\|1261180_1263598_-	cation-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.1e-17	20.2
WP_023190626.1\|1263697_1263880_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023190625.1\|1263892_1264096_-	hypothetical protein	Q9AZG0	Lactococcus_phage	5.6e-09	50.0
WP_012211755.1\|1264215_1264734_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	2.2e-25	39.5
WP_003626673.1\|1264748_1265705_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	3.6e-114	60.5
WP_012211358.1\|1266409_1267588_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_065866883.1\|1268947_1270354_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_079227905.1\|1270627_1270699_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_012211753.1\|1270720_1271089_+	antitoxin HicB	A0A0A7S1E5	Clostridium_phage	9.2e-10	38.9
WP_012211358.1\|1271424_1272603_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853869.1\|1273785_1274394_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_101853870.1\|1274505_1276260_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	5.2e-87	36.7
WP_012211750.1\|1277281_1278568_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.3e-108	51.7
WP_012211749.1\|1279399_1279888_-	nitroreductase family protein	NA	NA	NA	NA
WP_065866353.1\|1281051_1282434_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_023191145.1\|1282433_1283375_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_101853871.1\|1283533_1284775_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	2.8e-119	57.2
WP_012211746.1\|1285525_1286248_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003626695.1\|1287242_1287947_-	NUDIX hydrolase	G3MA14	Bacillus_virus	1.6e-07	25.5
WP_003626697.1\|1289654_1291094_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	1.5e-95	41.8
WP_003626700.1\|1291090_1291645_+	cysteine hydrolase	G3MA16	Bacillus_virus	4.7e-34	41.8
WP_003626706.1\|1293787_1294423_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_012211738.1\|1297107_1298037_+	nucleoside hydrolase	NA	NA	NA	NA
WP_101854074.1\|1298223_1299510_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.3e-54	43.8
WP_101853872.1\|1299570_1300086_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1300808_1301987_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853873.1\|1302070_1303684_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_079227764.1\|1303728_1304304_-	NUDIX hydrolase	NA	NA	NA	NA
WP_012211358.1\|1305192_1306371_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012211734.1\|1306944_1308003_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003626723.1\|1308014_1309181_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_025283482.1\|1309201_1309981_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_012211732.1\|1309973_1310909_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_012211731.1\|1310910_1312065_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_003626729.1\|1312067_1312778_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_012211730.1\|1312797_1314114_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_065866341.1\|1314585_1315959_+	aspartate kinase	NA	NA	NA	NA
WP_012211728.1\|1315951_1316956_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_101853874.1\|1318737_1320474_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	3.6e-88	36.9
WP_101853875.1\|1320438_1321029_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_101853876.1\|1321018_1322293_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.1e-132	55.4
WP_101853877.1\|1322423_1323782_-	trigger factor	NA	NA	NA	NA
WP_012211723.1\|1323932_1325123_-	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	2.3e-30	27.3
WP_012211722.1\|1325312_1326146_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_101853878.1\|1326148_1327921_-	ribonuclease J	NA	NA	NA	NA
WP_003628079.1\|1328077_1328347_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_014919008.1\|1328545_1328803_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_003627943.1\|1328863_1329850_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_012211720.1\|1329846_1332135_-	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	8.2e-24	31.0
WP_012211719.1\|1332103_1332799_-	competence protein	NA	NA	NA	NA
WP_012211718.1\|1332876_1333911_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_003627939.1\|1333894_1334389_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	9.7e-23	36.2
WP_012211717.1\|1334391_1334940_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_101853879.1\|1334936_1335281_-	YlbG family protein	NA	NA	NA	NA
WP_023190858.1\|1335277_1336459_-	cell division protein FtsW	NA	NA	NA	NA
WP_003628073.1\|1336554_1338399_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	3.6e-22	41.5
WP_003628072.1\|1338651_1339206_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.6e-10	39.7
WP_003627933.1\|1339556_1339778_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_101853880.1\|1339784_1341464_+	ribonuclease J	NA	NA	NA	NA
WP_101853882.1\|1342648_1343926_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.8e-10	22.1
WP_012211712.1\|1343974_1346326_-	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	2.1e-59	27.0
WP_072748999.1\|1346325_1346970_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_012211710.1\|1346969_1347629_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_012211708.1\|1347722_1348850_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_14

1352221 : 1508150

162

Lactobacillus_phage(45.45%)

terminase,integrase,transposase,tRNA,portal,holin,tail,capsid

attL 1458939:1458960|attR 1498724:1498745

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211704.1\|1352221_1355005_-\|tRNA	isoleucine--tRNA ligase	A0A2K9L260	Tupanvirus	1.2e-88	27.9
WP_065866336.1\|1355225_1356023_-	DivIVA domain-containing protein	NA	NA	NA	NA
WP_003627654.1\|1355998_1356799_-	RNA-binding protein	NA	NA	NA	NA
WP_003627655.1\|1356798_1357101_-	YggT family protein	NA	NA	NA	NA
WP_012211702.1\|1357100_1357538_-	cell division protein SepF	NA	NA	NA	NA
WP_023190849.1\|1357555_1358875_-	cell division protein FtsZ	NA	NA	NA	NA
WP_012211700.1\|1358889_1360248_-	cell division protein FtsA	NA	NA	NA	NA
WP_012211699.1\|1360310_1361168_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_012211698.1\|1361184_1362291_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_003627666.1\|1362292_1363672_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_003627667.1\|1363681_1364650_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_003628054.1\|1366804_1367167_-	cell division protein FtsL	NA	NA	NA	NA
WP_012211697.1\|1367180_1368128_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_003627673.1\|1368132_1368564_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_101853884.1\|1368759_1369938_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_003628051.1\|1370138_1370471_-	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_003627675.1\|1370565_1370700_+	DUF4044 domain-containing protein	NA	NA	NA	NA
WP_012211696.1\|1370740_1371280_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_012211695.1\|1371279_1372131_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_101853885.1\|1372176_1373181_-	rod shape-determining protein	NA	NA	NA	NA
WP_003627679.1\|1373276_1373900_-	JAB domain-containing protein	NA	NA	NA	NA
WP_012211693.1\|1373938_1374616_-	HAD family phosphatase	NA	NA	NA	NA
WP_012211692.1\|1374605_1375880_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_012211691.1\|1375880_1378520_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	4.8e-161	43.4
WP_101853886.1\|1379046_1380225_+\|transposase	IS256-like element IS1201 family transposase	NA	NA	NA	NA
WP_012211690.1\|1380615_1381806_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.4e-123	57.7
WP_012211688.1\|1383905_1384832_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	1.7e-76	49.3
WP_012211687.1\|1384828_1385245_-	GtrA family protein	NA	NA	NA	NA
WP_023190373.1\|1385791_1386214_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003628039.1\|1386228_1386939_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_158648616.1\|1387623_1387761_-	hypothetical protein	NA	NA	NA	NA
WP_155248849.1\|1387774_1387924_-	hypothetical protein	NA	NA	NA	NA
WP_155248848.1\|1387971_1388130_-	hypothetical protein	NA	NA	NA	NA
WP_025283454.1\|1388111_1388366_-	hypothetical protein	NA	NA	NA	NA
WP_012211685.1\|1388553_1389354_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101854075.1\|1389526_1390330_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101853888.1\|1390573_1391383_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101854076.1\|1391786_1392149_+	DUF3232 domain-containing protein	NA	NA	NA	NA
WP_101853889.1\|1392297_1393035_-	hypothetical protein	NA	NA	NA	NA
WP_101853890.1\|1393299_1394562_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1394613_1395792_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853891.1\|1396030_1396687_-	hypothetical protein	Q4Z8Z5	Staphylococcus_phage	8.4e-06	31.9
WP_146211464.1\|1396688_1397186_-	hypothetical protein	NA	NA	NA	NA
WP_158648617.1\|1397685_1397850_+	hypothetical protein	NA	NA	NA	NA
WP_101853884.1\|1398305_1399484_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853893.1\|1399666_1400716_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	5.4e-47	34.9
WP_101511663.1\|1402964_1403429_-	hypothetical protein	NA	NA	NA	NA
WP_101853894.1\|1403385_1403727_-	hypothetical protein	NA	NA	NA	NA
WP_003631082.1\|1403782_1404640_-	SHOCT domain-containing protein	NA	NA	NA	NA
WP_101853706.1\|1404799_1405978_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853895.1\|1406012_1406753_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1407362_1408541_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853896.1\|1408562_1409222_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101853897.1\|1410439_1411249_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101853898.1\|1411265_1411847_-	DUF3232 domain-containing protein	NA	NA	NA	NA
WP_101853882.1\|1412097_1413375_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.8e-10	22.1
WP_101853899.1\|1413502_1413892_-	hypothetical protein	NA	NA	NA	NA
WP_101853714.1\|1414729_1415587_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_101854077.1\|1415901_1416594_-	pseudouridine synthase	NA	NA	NA	NA
WP_126963158.1\|1416654_1416909_+	hypothetical protein	NA	NA	NA	NA
WP_080890085.1\|1416884_1417130_+	DUF3232 domain-containing protein	NA	NA	NA	NA
WP_003628028.1\|1417310_1417484_-	hypothetical protein	NA	NA	NA	NA
WP_003626189.1\|1417618_1418836_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_014563860.1\|1418835_1419996_-	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	2.3e-38	31.8
WP_101853900.1\|1420088_1421798_-	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_101853687.1\|1422005_1423412_+\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_003628026.1\|1423694_1424306_+	30S ribosomal protein S4	NA	NA	NA	NA
WP_023190607.1\|1424396_1424864_+	YueI family protein	NA	NA	NA	NA
WP_012211678.1\|1424863_1426177_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	6.2e-101	49.3
WP_003626176.1\|1426476_1426758_+	hypothetical protein	NA	NA	NA	NA
WP_003626174.1\|1426825_1427290_+	universal stress protein	NA	NA	NA	NA
WP_012211677.1\|1427355_1428549_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_003626171.1\|1428570_1428798_-	DUF2969 domain-containing protein	NA	NA	NA	NA
WP_012211676.1\|1428806_1429100_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA
WP_101853901.1\|1429113_1430103_-	rod shape-determining protein	NA	NA	NA	NA
WP_003626167.1\|1430186_1430417_-	DUF1146 domain-containing protein	NA	NA	NA	NA
WP_012211673.1\|1430480_1430921_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_101853902.1\|1430932_1432372_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_012211672.1\|1432394_1433357_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_012211671.1\|1433367_1434879_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_101853903.1\|1434893_1435442_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_012211669.1\|1435441_1435951_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_012211668.1\|1436002_1436236_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_012211667.1\|1436255_1436969_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_101812721.1\|1437092_1437722_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_003628018.1\|1437805_1438807_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	1.2e-48	38.1
WP_023190612.1\|1438812_1439655_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003626148.1\|1439647_1440736_-	peptide chain release factor 1	W8EDB3	Pseudomonas_phage	1.4e-05	44.6
WP_003626146.1\|1440752_1441352_-	thymidine kinase	C1KFH3	Lactobacillus_virus	2.4e-47	50.8
WP_023190613.1\|1441540_1442893_+	Mur ligase family protein	NA	NA	NA	NA
WP_012211663.1\|1443212_1444226_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	1.2e-06	26.1
WP_003626134.1\|1447205_1448546_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_101853904.1\|1448621_1449236_-	VanZ family protein	NA	NA	NA	NA
WP_003626130.1\|1449360_1451532_+	LTA synthase family protein	W6LM83	Streptococcus_phage	1.6e-149	43.2
WP_101853905.1\|1453034_1454492_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.6e-33	33.8
WP_101853906.1\|1454491_1455214_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.7e-36	36.4
WP_014563890.1\|1455213_1455606_-	SdpI family protein	NA	NA	NA	NA
WP_012211655.1\|1455640_1456606_-	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
WP_012211654.1\|1456698_1457856_-	putative C-S lyase	NA	NA	NA	NA
1458939:1458960	attL	NA	NA	NA	NA
WP_101853907.1\|1458989_1459232_-	hypothetical protein	NA	NA	NA	NA
WP_101853908.1\|1459487_1460381_-	lysin	Q38373	Lactococcus_phage	6.4e-89	55.3
WP_101853909.1\|1460370_1460829_-\|holin	phage holin	U3PBD0	Lactobacillus_phage	3.6e-11	38.8
WP_101853910.1\|1460825_1461023_-	hypothetical protein	NA	NA	NA	NA
WP_101853911.1\|1461035_1461431_-	hypothetical protein	A9UJV1	Lactobacillus_phage	9.9e-10	32.6
WP_101853912.1\|1461393_1461552_-	XkdX family protein	NA	NA	NA	NA
WP_101853913.1\|1461551_1462133_-	hypothetical protein	NA	NA	NA	NA
WP_101853914.1\|1462263_1462890_-	hypothetical protein	A0A2P0ZLE1	Lactobacillus_phage	4.1e-10	33.0
WP_101853915.1\|1462984_1464565_-	DUF2479 domain-containing protein	NA	NA	NA	NA
WP_101853916.1\|1464524_1464761_-	hypothetical protein	NA	NA	NA	NA
WP_110540405.1\|1464769_1468222_-	endopeptidase	B8R659	Lactobacillus_phage	8.6e-33	23.8
WP_101853917.1\|1468221_1469004_-\|tail	phage tail protein	Q9T1E6	Lactobacillus_phage	8.8e-18	26.8
WP_101853918.1\|1468993_1475572_-	tape measure protein	A0A0A7DMV4	Lactobacillus_phage	3.7e-117	43.6
WP_101853919.1\|1475571_1476219_-	hypothetical protein	U3PFU8	Lactobacillus_phage	3.4e-15	32.6
WP_101853920.1\|1476228_1476663_-	hypothetical protein	NA	NA	NA	NA
WP_101854079.1\|1476678_1477287_-\|capsid	phage capsid protein	O03972	Lactobacillus_phage	1.5e-28	49.6
WP_101854080.1\|1477311_1477719_-\|capsid	phage capsid protein	NA	NA	NA	NA
WP_101853921.1\|1477732_1478131_-\|capsid	capsid protein	O03933	Lactobacillus_phage	1.7e-14	36.5
WP_101853922.1\|1478130_1478481_-\|capsid	minor capsid protein	O03932	Lactobacillus_phage	3.1e-15	38.8
WP_101853923.1\|1478473_1478866_-	hypothetical protein	NA	NA	NA	NA
WP_101853924.1\|1478879_1479911_-	replication protein	O03966	Lactobacillus_phage	5.4e-108	61.1
WP_101853925.1\|1479921_1480542_-	scaffolding protein	U3PIU5	Lactobacillus_phage	5.2e-05	25.3
WP_101853926.1\|1480641_1480854_-	hypothetical protein	NA	NA	NA	NA
WP_158648618.1\|1480834_1481092_-	hypothetical protein	NA	NA	NA	NA
WP_101854082.1\|1481099_1482233_-\|capsid	minor capsid protein	U3PFU0	Lactobacillus_phage	2.2e-102	50.4
WP_101854081.1\|1482216_1483785_-\|portal	phage portal protein	Q38341	Lactococcus_phage	2.4e-144	53.6
WP_101853928.1\|1483853_1485110_-\|terminase	PBSX family phage terminase large subunit	A4L7R3	Lactococcus_phage	4.2e-163	63.9
WP_101853929.1\|1485126_1485801_-	helix-turn-helix domain-containing protein	A0A1S5SAK3	Streptococcus_phage	3.7e-33	46.1
WP_101853932.1\|1486241_1486574_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_101853933.1\|1487003_1487474_-	hypothetical protein	Q6SE89	Lactobacillus_prophage	4.5e-09	31.5
WP_158648619.1\|1487485_1487668_-	hypothetical protein	NA	NA	NA	NA
WP_101853935.1\|1487860_1488127_-	hypothetical protein	A9D9Q0	Lactobacillus_prophage	4.9e-05	37.5
WP_101854083.1\|1488138_1488315_-\|integrase	integrase	NA	NA	NA	NA
WP_101853936.1\|1488383_1488860_-	hypothetical protein	L0P6G1	Lactobacillus_phage	3.9e-85	91.7
WP_023191853.1\|1488831_1489122_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1489207_1490386_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101854084.1\|1490565_1491366_-	ATP-binding protein	L0P6I8	Lactobacillus_phage	2.0e-150	98.9
WP_101853937.1\|1491400_1492261_-	hypothetical protein	L0P704	Lactobacillus_phage	1.9e-58	92.4
WP_101853938.1\|1492263_1492971_-	DUF1071 domain-containing protein	X2CXM9	Lactobacillus_phage	3.8e-44	48.0
WP_101853939.1\|1492963_1493221_-	hypothetical protein	NA	NA	NA	NA
WP_101853940.1\|1493230_1493506_-	hypothetical protein	NA	NA	NA	NA
WP_158648620.1\|1493580_1493736_-	hypothetical protein	NA	NA	NA	NA
WP_101853941.1\|1493735_1493969_-	hypothetical protein	NA	NA	NA	NA
WP_101853942.1\|1493978_1494293_-	DNA-binding protein	NA	NA	NA	NA
WP_101853943.1\|1494252_1494495_-	hypothetical protein	NA	NA	NA	NA
WP_101853944.1\|1494506_1495220_-	phage regulatory protein	A0A0A7DN29	Lactobacillus_phage	7.4e-32	55.2
WP_101853945.1\|1495252_1495459_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101853946.1\|1495624_1495978_+	helix-turn-helix transcriptional regulator	E9LUL4	Lactobacillus_phage	1.4e-10	39.3
WP_101853947.1\|1495986_1496388_+	ImmA/IrrE family metallo-endopeptidase	O48433	Lactobacillus_phage	3.7e-20	44.7
WP_101853948.1\|1496374_1497511_+	hypothetical protein	NA	NA	NA	NA
WP_101853949.1\|1497600_1498707_+\|integrase	site-specific integrase	Q6SEG4	Lactobacillus_prophage	5.8e-84	45.1
WP_012211653.1\|1499215_1500400_-	acetate kinase	NA	NA	NA	NA
1498724:1498745	attR	NA	NA	NA	NA
WP_012211652.1\|1500448_1501450_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003626117.1\|1501619_1502120_-	ComGF family competence protein	NA	NA	NA	NA
WP_003626116.1\|1502127_1502397_-	hypothetical protein	NA	NA	NA	NA
WP_003626115.1\|1502393_1502825_-	type II secretion system protein	NA	NA	NA	NA
WP_003626112.1\|1502793_1503144_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_035509571.1\|1503155_1504157_-	type II secretion system protein F	NA	NA	NA	NA
WP_003626108.1\|1504125_1505100_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA
WP_003626106.1\|1505247_1505976_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_101853950.1\|1506066_1506582_-	VanZ family protein	NA	NA	NA	NA
WP_003626102.1\|1506676_1506862_-	type Z 30S ribosomal protein S14	NA	NA	NA	NA
WP_146211424.1\|1506959_1508150_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.2e-119	56.4

DBSCAN-SWA_15

1555817 : 1687960

106

Streptococcus_phage(14.29%)

protease,bacteriocin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101812731.1\|1555817_1557041_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	3.5e-122	58.5
WP_101853953.1\|1557426_1558704_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.4e-12	23.2
WP_003626023.1\|1558801_1559821_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_101812735.1\|1559862_1560705_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_012211614.1\|1560694_1561663_-	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_012211613.1\|1561679_1561958_-	hypothetical protein	NA	NA	NA	NA
WP_101511653.1\|1561965_1563082_-	peptide chain release factor 2	NA	NA	NA	NA
WP_012211612.1\|1563149_1565549_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_012211611.1\|1565688_1566234_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_012211610.1\|1566314_1567010_-	ComF family protein	NA	NA	NA	NA
WP_012211609.1\|1567006_1568293_-	DEAD/DEAH box helicase family protein	A0A1X9I5S6	Streptococcus_phage	2.9e-82	43.8
WP_012211608.1\|1568337_1569000_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	3.4e-39	43.8
WP_101812736.1\|1569026_1570184_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_012211606.1\|1570291_1571923_-	ribonuclease Y	NA	NA	NA	NA
WP_065866894.1\|1572041_1573139_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	3.2e-119	62.1
WP_012211604.1\|1573322_1573883_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_012211603.1\|1573905_1575024_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003633413.1\|1575091_1575820_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_003625998.1\|1575820_1577077_-	insulinase family protein	A0A2P1EIE5	Megavirus	1.0e-12	28.1
WP_101812737.1\|1577073_1578306_-	insulinase family protein	NA	NA	NA	NA
WP_023191333.1\|1578274_1580692_-	DNA translocase FtsK	Q853W3	Mycobacterium_phage	1.7e-83	48.0
WP_003625992.1\|1580712_1581102_-	DUF1149 family protein	NA	NA	NA	NA
WP_003625990.1\|1581101_1581662_-\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_012211600.1\|1581712_1582912_-	AI-2E family transporter	NA	NA	NA	NA
WP_012211599.1\|1583380_1586137_-	cation-transporting P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.1e-75	29.6
WP_012211598.1\|1586289_1587318_+	lactonase family protein	NA	NA	NA	NA
WP_012211597.1\|1587424_1588117_+	hypothetical protein	NA	NA	NA	NA
WP_023190421.1\|1590036_1590933_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	3.6e-07	31.0
WP_012211595.1\|1590916_1591729_-	NAD kinase	NA	NA	NA	NA
WP_003627775.1\|1591725_1592358_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_003633400.1\|1592481_1593096_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_012211594.1\|1593174_1593792_+	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_012211358.1\|1594119_1595298_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853954.1\|1596107_1596848_-	adaptor protein MecA	NA	NA	NA	NA
WP_012211591.1\|1596939_1597338_-	transcriptional regulator Spx	NA	NA	NA	NA
WP_012211590.1\|1597569_1599303_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_012211589.1\|1599302_1599569_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003627783.1\|1599682_1599877_-	hypothetical protein	NA	NA	NA	NA
WP_101853955.1\|1600041_1600761_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_101853956.1\|1600890_1603080_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A1C3S747	Escherichia_phage	8.8e-124	40.5
WP_012211585.1\|1603231_1603513_+	DUF1827 family protein	NA	NA	NA	NA
WP_003627787.1\|1603580_1605152_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	5.5e-35	26.2
WP_072749037.1\|1605151_1606024_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_003627789.1\|1606130_1606592_+	hypothetical protein	NA	NA	NA	NA
WP_003627790.1\|1606593_1607076_-	hypothetical protein	NA	NA	NA	NA
WP_020829071.1\|1607086_1607902_-	recombination regulator RecX	NA	NA	NA	NA
WP_003627793.1\|1608023_1609406_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	3.9e-69	33.2
WP_003627794.1\|1610117_1610702_-\|transposase	transposase	NA	NA	NA	NA
WP_012211582.1\|1610750_1611206_-\|transposase	transposase	NA	NA	NA	NA
WP_003627796.1\|1611209_1611479_-	hypothetical protein	NA	NA	NA	NA
WP_101853957.1\|1613166_1613541_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_003627958.1\|1613552_1613783_+\|transposase	transposase	NA	NA	NA	NA
WP_003627959.1\|1613757_1615095_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	7.4e-49	34.4
WP_003626750.1\|1615687_1618552_-	AMP-binding protein	A0A2K9L3I8	Tupanvirus	1.9e-33	27.0
WP_012211245.1\|1618968_1620147_+\|transposase	IS256-like element IS1201 family transposase	NA	NA	NA	NA
WP_003626759.1\|1621625_1621910_+	hypothetical protein	NA	NA	NA	NA
WP_012211579.1\|1621948_1623112_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_012211578.1\|1623111_1624323_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003633307.1\|1624322_1625483_-	thiolase family protein	NA	NA	NA	NA
WP_101854085.1\|1625716_1627045_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QMQ9	Streptococcus_phage	3.5e-59	41.3
WP_101853958.1\|1627109_1628009_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	6.4e-73	48.1
WP_012211577.1\|1628070_1628994_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_003633294.1\|1629002_1629830_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_101853701.1\|1629962_1631369_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_003626773.1\|1631579_1632026_+	flavodoxin	NA	NA	NA	NA
WP_003626776.1\|1632018_1632558_+	GtrA family protein	NA	NA	NA	NA
WP_003633292.1\|1632581_1633724_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	5.5e-29	30.3
WP_023192258.1\|1633831_1634020_+	hypothetical protein	NA	NA	NA	NA
WP_003633289.1\|1634187_1635516_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003633288.1\|1635512_1636745_-	DEAD/DEAH box helicase	A0A1B1IS59	uncultured_Mediterranean_phage	1.2e-34	28.5
WP_020829052.1\|1636744_1637449_-	lysozyme	NA	NA	NA	NA
WP_023190478.1\|1638790_1639360_-	hypoxanthine phosphoribosyltransferase	A0A2K9L634	Tupanvirus	4.9e-10	27.6
WP_012211571.1\|1639466_1640828_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_012211570.1\|1641642_1641915_-	hypothetical protein	NA	NA	NA	NA
WP_012211569.1\|1642040_1642526_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_012211567.1\|1647218_1648067_-	patatin family protein	NA	NA	NA	NA
WP_101853959.1\|1648233_1649511_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.0e-12	21.7
WP_012211566.1\|1649609_1652009_-	phosphoketolase family protein	NA	NA	NA	NA
WP_012211565.1\|1652305_1653070_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_012211564.1\|1653075_1653441_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_012211563.1\|1653527_1653851_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_101853960.1\|1653850_1655254_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_012211561.1\|1655246_1655708_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_012211560.1\|1655694_1656933_-	SufS family cysteine desulfurase	Q2XUY6	environmental_halophage	4.7e-98	41.8
WP_012211559.1\|1656907_1658185_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_003626810.1\|1658196_1658991_-	Fe-S cluster assembly ATPase SufC	A0A1M7XV31	Cedratvirus	7.3e-12	27.6
WP_012211557.1\|1660043_1660862_+	HAD family hydrolase	NA	NA	NA	NA
WP_012211556.1\|1660951_1661245_-	hypothetical protein	NA	NA	NA	NA
WP_012211554.1\|1663641_1664568_-	nucleoside hydrolase	NA	NA	NA	NA
WP_101853961.1\|1664685_1666701_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.9e-64	35.2
WP_012211552.1\|1666761_1667454_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_012211551.1\|1667453_1668380_-	ribokinase	A0A2H4N7X4	Lake_Baikal_phage	6.3e-07	37.5
WP_012211550.1\|1668493_1669297_-	DUF4931 domain-containing protein	NA	NA	NA	NA
WP_012211549.1\|1669517_1670924_+\|transposase	ISLre2-like element ISLhe13 family transposase	NA	NA	NA	NA
WP_012211548.1\|1671078_1671348_+	ACT domain-containing protein	NA	NA	NA	NA
WP_003626829.1\|1671360_1672704_+	PFL family protein	NA	NA	NA	NA
WP_012211547.1\|1672852_1674154_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_101853962.1\|1674352_1675630_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.4e-11	22.9
WP_158648621.1\|1676326_1677550_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	3.0e-121	58.3
WP_012211545.1\|1678092_1678746_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_012211544.1\|1678760_1679402_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_012211543.1\|1679401_1680220_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_012211542.1\|1680230_1680971_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-38	41.4
WP_012211358.1\|1681195_1682374_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_023190970.1\|1684551_1685184_+	uridine kinase	A0A1V0SAA3	Catovirus	6.2e-38	39.5
WP_012211358.1\|1686781_1687960_-\|transposase	IS256 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1704162 : 1847962

107

Lactobacillus_virus(13.79%)

holin,tRNA,integrase,transposase

attL 1768492:1768551|attR 1794411:1796009

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041806184.1\|1704162_1705353_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	3.1e-123	57.7
WP_041806185.1\|1707038_1708364_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	4.0e-55	35.8
WP_003627960.1\|1708393_1709002_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	1.5e-33	43.2
WP_020829066.1\|1709104_1709605_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_101853965.1\|1709815_1711222_-\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_035509267.1\|1712493_1712922_-	hypothetical protein	NA	NA	NA	NA
WP_003633083.1\|1713130_1713331_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.4e-20	71.4
WP_012211524.1\|1714685_1715642_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.9e-39	37.0
WP_003633078.1\|1715759_1716317_-	YdhK family protein	NA	NA	NA	NA
WP_003633076.1\|1716498_1716750_-	PspC domain-containing protein	NA	NA	NA	NA
WP_003633074.1\|1716795_1717143_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003633072.1\|1717216_1717678_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_003626886.1\|1719539_1720331_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_101853966.1\|1720351_1721530_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003633061.1\|1721548_1722511_+	ketopantoate reductase family protein	NA	NA	NA	NA
WP_003626890.1\|1723980_1725333_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	1.9e-116	48.2
WP_003626892.1\|1725698_1727075_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_003626893.1\|1727111_1727453_-	hypothetical protein	NA	NA	NA	NA
WP_101853965.1\|1728670_1730077_+\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_003633053.1\|1730217_1730922_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_003633052.1\|1731714_1732635_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	2.7e-18	25.8
WP_003626901.1\|1732659_1734090_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_003626902.1\|1734094_1735534_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_003633051.1\|1735533_1735842_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_020829042.1\|1735855_1737004_-	CamS family sex pheromone protein	NA	NA	NA	NA
WP_012211516.1\|1737016_1739023_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	7.1e-104	36.1
WP_003633049.1\|1739063_1741301_-	DNA helicase PcrA	A7KV33	Bacillus_phage	5.2e-132	41.5
WP_003633047.1\|1741386_1742034_-	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	1.0e-27	47.7
WP_003626912.1\|1742271_1742742_-	SprT family protein	NA	NA	NA	NA
WP_003626913.1\|1742729_1743428_-	glycosyl transferase	L7RBS6	Acanthamoeba_polyphaga_moumouvirus	2.1e-07	27.6
WP_003633045.1\|1743430_1744861_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_003633044.1\|1744865_1746020_-	CDP-glycerol--glycerophosphate glycerophosphotransferase	NA	NA	NA	NA
WP_041806182.1\|1748958_1750200_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	5.3e-118	57.4
WP_003626929.1\|1750396_1751227_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.3e-67	51.1
WP_003633021.1\|1751223_1752702_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	1.3e-115	47.6
WP_003633019.1\|1752789_1753890_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_020829039.1\|1753897_1754626_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_101853967.1\|1754878_1756069_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.4e-128	59.5
WP_003633007.1\|1756179_1756566_+	glycerol-3-phosphate cytidylyltransferase	A0A0F7LBI5	uncultured_marine_virus	7.1e-13	47.2
WP_003633005.1\|1756628_1757330_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003633002.1\|1757418_1758534_-	hypothetical protein	NA	NA	NA	NA
WP_003633000.1\|1758923_1759475_-	hypothetical protein	NA	NA	NA	NA
WP_101853968.1\|1764138_1765356_-	phosphoglycerate mutase	A0A1X9IGJ2	Lactococcus_phage	8.3e-15	37.9
WP_023190837.1\|1765356_1765935_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	2.5e-22	37.1
WP_041810784.1\|1766004_1767063_-	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA
WP_101853969.1\|1767200_1767890_-	hypothetical protein	A0A249XZV3	Enterococcus_phage	2.8e-12	52.2
WP_003632978.1\|1768272_1768389_+	hypothetical protein	NA	NA	NA	NA
1768492:1768551	attL	NA	NA	NA	NA
WP_101853701.1\|1768628_1770035_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_003626959.1\|1771186_1771579_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1771789_1772968_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853970.1\|1773051_1773270_+	hypothetical protein	NA	NA	NA	NA
WP_046813904.1\|1773368_1773767_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_101853971.1\|1774072_1775314_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	4.3e-120	58.3
WP_012211493.1\|1775579_1776734_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_101853972.1\|1776750_1777464_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_146211448.1\|1777682_1777868_-	hypothetical protein	NA	NA	NA	NA
WP_101853974.1\|1778289_1779492_-\|integrase	tyrosine-type recombinase/integrase	Q4ZE80	Staphylococcus_phage	5.5e-11	24.4
WP_101853975.1\|1779555_1779750_-	hypothetical protein	NA	NA	NA	NA
WP_101853976.1\|1779795_1780839_-	replication initiation protein	A0A2K9LWK0	uncultured_virus	6.4e-08	28.5
WP_101853977.1\|1780852_1781191_-	hypothetical protein	NA	NA	NA	NA
WP_101853978.1\|1781187_1781589_-	hypothetical protein	NA	NA	NA	NA
WP_101854086.1\|1781785_1782157_-	hypothetical protein	NA	NA	NA	NA
WP_101853979.1\|1782379_1782724_-	hypothetical protein	NA	NA	NA	NA
WP_101853980.1\|1782720_1783794_-	cell division protein FtsK	NA	NA	NA	NA
WP_101853981.1\|1783796_1784111_-	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|1784994_1786173_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_158648622.1\|1786289_1786442_-	hypothetical protein	NA	NA	NA	NA
WP_101853982.1\|1787477_1791824_+	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA
WP_101853701.1\|1794547_1795954_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_158648623.1\|1796946_1798131_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	8.1e-124	59.1
1794411:1796009	attR	NA	NA	NA	NA
WP_012211358.1\|1799279_1800458_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_003626966.1\|1800611_1801361_+	TIGR02452 family protein	NA	NA	NA	NA
WP_003626968.1\|1801378_1801750_-	hypothetical protein	NA	NA	NA	NA
WP_101853984.1\|1802018_1803209_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.9e-125	58.7
WP_101853673.1\|1805015_1806293_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_003626979.1\|1807112_1807340_-	hypothetical protein	NA	NA	NA	NA
WP_101853985.1\|1808261_1809449_-	acetate kinase	NA	NA	NA	NA
WP_012211358.1\|1809599_1810778_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_158648624.1\|1811078_1811873_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_101853986.1\|1811799_1812192_-	hypothetical protein	NA	NA	NA	NA
WP_012211487.1\|1812145_1812613_-	hypothetical protein	NA	NA	NA	NA
WP_012211486.1\|1812594_1813197_+	amino acid permease	NA	NA	NA	NA
WP_080516411.1\|1813410_1813524_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_012211485.1\|1813707_1814001_-	hypothetical protein	NA	NA	NA	NA
WP_012211484.1\|1814074_1815886_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	Q76DQ7	Chlorella_virus	8.1e-91	37.2
WP_023191057.1\|1816080_1818705_-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_065866883.1\|1819078_1820485_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_023191058.1\|1820626_1822000_+	amino acid permease	NA	NA	NA	NA
WP_101812857.1\|1822037_1822529_-	acetyltransferase	NA	NA	NA	NA
WP_101853987.1\|1822628_1823807_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853988.1\|1824091_1824922_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012211481.1\|1824966_1825335_-	DUF956 family protein	NA	NA	NA	NA
WP_012211480.1\|1825338_1826259_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_012211479.1\|1826287_1827100_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_012211478.1\|1827118_1828129_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_101853701.1\|1828269_1829676_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_101853989.1\|1831930_1832332_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_012211476.1\|1832529_1833381_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014918044.1\|1836658_1836844_-	hypothetical protein	NA	NA	NA	NA
WP_012212192.1\|1838977_1840285_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.4e-92	43.8
WP_012212193.1\|1840508_1841060_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012212194.1\|1841059_1841668_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	4.7e-35	38.5
WP_012212195.1\|1841797_1842595_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_041810741.1\|1842750_1843452_+	hypothetical protein	NA	NA	NA	NA
WP_095661977.1\|1843535_1844918_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003627852.1\|1844963_1845998_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_101853990.1\|1846261_1847962_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	4.6e-88	36.9

DBSCAN-SWA_17

1859880 : 1922598

Lactobacillus_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211358.1\|1859880_1861059_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012212206.1\|1861271_1862699_-	C69 family dipeptidase	NA	NA	NA	NA
WP_012212207.1\|1862740_1863595_-	DNA nuclease	NA	NA	NA	NA
WP_012212208.1\|1863685_1864639_-	DNA polymerase III subunit epsilon	A0A0K2SUJ2	Clostridium_phage	8.8e-12	33.1
WP_012212209.1\|1864647_1865469_-	hypothetical protein	NA	NA	NA	NA
WP_158298624.1\|1865483_1865642_-	hypothetical protein	NA	NA	NA	NA
WP_101853994.1\|1865735_1866977_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	6.3e-119	57.2
WP_012212211.1\|1867157_1867565_-	DUF3290 domain-containing protein	NA	NA	NA	NA
WP_012212212.1\|1867652_1868393_-	nicotinamide mononucleotide transporter	A0A0A7NTY4	Lactobacillus_phage	6.8e-121	83.1
WP_012212213.1\|1869242_1870847_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-15	23.3
WP_101853687.1\|1871018_1872425_+\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_012212214.1\|1872574_1873489_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_012212215.1\|1873578_1874580_+	adenosine deaminase	NA	NA	NA	NA
WP_012212216.1\|1874627_1875131_+	nucleoside deoxyribosyltransferase	C1KFI2	Lactobacillus_virus	1.2e-12	31.2
WP_080516438.1\|1875530_1875950_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_012212217.1\|1876133_1877435_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_012212218.1\|1877487_1878060_-	elongation factor P	NA	NA	NA	NA
WP_012212219.1\|1878094_1879009_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	3.6e-31	33.2
WP_012212220.1\|1879067_1879628_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_023191161.1\|1881174_1883481_-	AAA family ATPase	NA	NA	NA	NA
WP_023191160.1\|1883630_1884317_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003627817.1\|1884378_1885029_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_023191139.1\|1885245_1887045_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_101853995.1\|1887057_1887807_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-34	39.5
WP_101853884.1\|1888157_1889336_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853996.1\|1889357_1890605_-	hypothetical protein	NA	NA	NA	NA
WP_012212226.1\|1890693_1891365_+	hypothetical protein	NA	NA	NA	NA
WP_012212227.1\|1891788_1892793_-	asparaginase	NA	NA	NA	NA
WP_023191135.1\|1893674_1894043_+	hypothetical protein	NA	NA	NA	NA
WP_095662341.1\|1894108_1894384_+	hypothetical protein	NA	NA	NA	NA
WP_012212228.1\|1894856_1895363_+	hypothetical protein	NA	NA	NA	NA
WP_101812858.1\|1895379_1895775_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012212231.1\|1896555_1897431_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	7.1e-77	50.3
WP_097550426.1\|1897595_1899701_-	putative ornithine decarboxylase	NA	NA	NA	NA
WP_012212233.1\|1899925_1901377_+	APC family permease	NA	NA	NA	NA
WP_101853997.1\|1904819_1906286_-	flippase	NA	NA	NA	NA
WP_101853998.1\|1906309_1907272_-	glycosyltransferase	NA	NA	NA	NA
WP_101853987.1\|1907469_1908648_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853999.1\|1909125_1910184_+\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	7.1e-47	35.4
WP_101854000.1\|1910196_1911174_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_101854001.1\|1911327_1912506_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_158648625.1\|1912589_1912730_-	hypothetical protein	NA	NA	NA	NA
WP_101854002.1\|1912906_1913881_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_101854003.1\|1913966_1915058_-	EpsG family protein	NA	NA	NA	NA
WP_101854004.1\|1915131_1915953_-	glycosyltransferase family 2 protein	A0A2P1ELT8	Moumouvirus	4.0e-05	31.9
WP_101854005.1\|1915967_1916870_-	capsular polysaccharide synthesis family protein	NA	NA	NA	NA
WP_056970778.1\|1916869_1917682_-	glycosyltransferase	A0A1V0SAH6	Catovirus	3.2e-15	45.5
WP_101854006.1\|1917672_1918797_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_101854007.1\|1918802_1919456_-	sugar transferase	NA	NA	NA	NA
WP_101853687.1\|1919603_1921010_-\|transposase	ISLre2-like element ISLhe10 family transposase	NA	NA	NA	NA
WP_101854008.1\|1921320_1922598_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.9e-10	23.2

DBSCAN-SWA_18

1932803 : 1976104

Lactobacillus_virus(27.27%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051356298.1\|1932803_1934387_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA
WP_014919431.1\|1934319_1934970_-\|transposase	IS607 family transposase	A0A7Q0	Microcystis_virus	5.2e-40	45.2
WP_023062121.1\|1935035_1935356_-	hypothetical protein	NA	NA	NA	NA
WP_023192438.1\|1935403_1935613_-	Protein of unknown function	NA	NA	NA	NA
WP_158648626.1\|1935707_1936931_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	6.0e-122	58.5
WP_003627295.1\|1937019_1937289_-	hypothetical protein	NA	NA	NA	NA
WP_003627296.1\|1937382_1937934_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	1.2e-18	44.4
WP_020828975.1\|1938123_1938669_-	AAA family ATPase	A0A218KC48	Bacillus_phage	7.2e-11	31.7
WP_101854015.1\|1938763_1939063_+	DUF2187 domain-containing protein	NA	NA	NA	NA
WP_101854016.1\|1939155_1940661_+	hypothetical protein	NA	NA	NA	NA
WP_072748773.1\|1940675_1941317_-	hypothetical protein	NA	NA	NA	NA
WP_101854017.1\|1941561_1942755_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	2.3e-118	57.0
WP_012211358.1\|1942838_1944017_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101853987.1\|1944388_1945567_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101854018.1\|1945823_1946168_-	hypothetical protein	NA	NA	NA	NA
WP_003627306.1\|1946280_1946817_-	hypothetical protein	NA	NA	NA	NA
WP_101854019.1\|1946992_1948222_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	4.9e-116	55.4
WP_101853673.1\|1948472_1949750_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_012212260.1\|1949997_1950483_-	threonine/serine exporter	NA	NA	NA	NA
WP_012212261.1\|1950485_1951256_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_012212262.1\|1951266_1952808_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	3.7e-44	28.0
WP_023190894.1\|1952816_1953194_-	hypothetical protein	NA	NA	NA	NA
WP_041810751.1\|1953358_1953883_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_101853673.1\|1956190_1957468_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_101854020.1\|1957518_1958760_-	LytR family transcriptional regulator	NA	NA	NA	NA
WP_012211358.1\|1958891_1960070_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101854021.1\|1960311_1962108_+	oligoendopeptidase F	NA	NA	NA	NA
WP_080516441.1\|1962395_1962689_+	Fic family protein	NA	NA	NA	NA
WP_023190802.1\|1963606_1964983_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_003627328.1\|1965420_1966215_-	metal ABC transporter permease	NA	NA	NA	NA
WP_012212267.1\|1966214_1966862_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.1e-17	29.1
WP_095662157.1\|1966893_1967811_-	zinc ABC transporter solute-binding protein	NA	NA	NA	NA
WP_003630183.1\|1968073_1968346_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012211358.1\|1968567_1969746_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101854022.1\|1969929_1971927_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_012212270.1\|1971947_1972862_-	1-phosphofructokinase	NA	NA	NA	NA
WP_041810005.1\|1972861_1973617_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	5.0e-18	27.8
WP_003630190.1\|1973976_1974144_-	toxin-antitoxin system protein	NA	NA	NA	NA
WP_012212272.1\|1974124_1974433_-	hypothetical protein	NA	NA	NA	NA
WP_014919460.1\|1974703_1974895_-	hypothetical protein	NA	NA	NA	NA
WP_003630196.1\|1975194_1975416_-	hypothetical protein	NA	NA	NA	NA
WP_014919462.1\|1975405_1975633_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_101854023.1\|1975780_1976104_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA

DBSCAN-SWA_19

1996079 : 2037452

Lactococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012212324.1\|1996079_1997405_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	2.1e-56	36.3
WP_065866771.1\|1997434_1998043_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	2.0e-33	43.2
WP_012212289.1\|1998220_1998463_-	hypothetical protein	NA	NA	NA	NA
WP_012212290.1\|1998564_1999977_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003630234.1\|2000021_2000696_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-33	39.4
WP_101854025.1\|2000697_2001759_-	ABC transporter permease	NA	NA	NA	NA
WP_003630236.1\|2001759_2002287_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_101854026.1\|2002397_2002997_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_012212294.1\|2003152_2003908_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_012212295.1\|2003904_2004666_-	peroxide stress protein YaaA	NA	NA	NA	NA
WP_012212296.1\|2004724_2005369_+	hypothetical protein	NA	NA	NA	NA
WP_012211358.1\|2005813_2006992_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_101854027.1\|2008830_2011365_-	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	3.8e-70	26.0
WP_003627391.1\|2011590_2011950_+	hypothetical protein	A0A0E3XCL7	Enterococcus_phage	1.5e-20	67.1
WP_101854028.1\|2012014_2013292_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_101854029.1\|2013483_2014464_-	cytochrome C5	NA	NA	NA	NA
WP_023190700.1\|2014614_2015862_+	MFS transporter	NA	NA	NA	NA
WP_146212403.1\|2015993_2017178_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	3.6e-124	59.6
WP_052541595.1\|2017349_2017712_+	hypothetical protein	NA	NA	NA	NA
WP_101854031.1\|2018408_2019587_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_054607623.1\|2021136_2022840_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	3.5e-88	36.9
WP_101854032.1\|2022841_2025010_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A0D3MSW9	Lactococcus_phage	1.9e-171	47.5
WP_020828951.1\|2025002_2025425_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	J9PTY0	Bacillus_phage	1.1e-11	38.3
WP_003630318.1\|2025408_2026416_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A160DHK0	Gordonia_phage	2.7e-96	53.7
WP_101853681.1\|2026759_2027938_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_079227888.1\|2028058_2028412_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_065866763.1\|2028719_2029277_-	serine acetyltransferase	NA	NA	NA	NA
WP_023190615.1\|2029242_2030427_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_012212307.1\|2030448_2031360_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	2.8e-60	41.7
WP_035514011.1\|2032635_2032854_-	hypothetical protein	NA	NA	NA	NA
WP_051359594.1\|2032954_2033827_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_023190989.1\|2033938_2035213_-	MFS transporter	NA	NA	NA	NA
WP_023190988.1\|2035308_2036157_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_012211358.1\|2036273_2037452_-\|transposase	IS256 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2060058 : 2138454

Streptococcus_phage(11.76%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012211358.1\|2060058_2061237_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012212126.1\|2063119_2063728_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	4.0e-34	43.2
WP_025283976.1\|2066289_2067177_+	EamA family transporter	NA	NA	NA	NA
WP_065866753.1\|2069507_2071775_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.2e-59	30.1
WP_012212328.1\|2072239_2072758_-	N-acetyltransferase	NA	NA	NA	NA
WP_101854035.1\|2073101_2074328_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	4.9e-39	29.5
WP_023191345.1\|2074385_2074709_-	hypothetical protein	NA	NA	NA	NA
WP_003630431.1\|2074965_2075715_-	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_101854036.1\|2076143_2077190_-	fucose-binding lectin II	NA	NA	NA	NA
WP_101854037.1\|2077277_2079698_-	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_012212331.1\|2080161_2081556_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_035515559.1\|2082385_2083282_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_101854038.1\|2083269_2084934_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.4e-20	31.0
WP_003630445.1\|2084941_2085652_+	ECF transporter S component	NA	NA	NA	NA
WP_023191339.1\|2086759_2087095_+	EutP/PduV family microcompartment system protein	NA	NA	NA	NA
WP_101854039.1\|2087557_2088835_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.6e-11	21.4
WP_012212335.1\|2088976_2090326_-	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-124	50.3
WP_035514399.1\|2090695_2090908_+	hypothetical protein	NA	NA	NA	NA
WP_101854040.1\|2092510_2093350_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_065866748.1\|2093373_2094534_-	MFS transporter	A0A2H4UVM2	Bodo_saltans_virus	5.7e-05	22.1
WP_101853882.1\|2094738_2096016_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	3.8e-10	22.1
WP_046814537.1\|2097339_2097750_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_023191696.1\|2097852_2097951_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_101812836.1\|2098329_2098473_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_101854041.1\|2098590_2099832_-	OFA family MFS transporter	NA	NA	NA	NA
WP_101853673.1\|2100236_2101514_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.3e-10	23.4
WP_014564328.1\|2103724_2104498_-	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_023061636.1\|2106177_2106987_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003625106.1\|2107268_2107955_+	cobyric acid synthase	NA	NA	NA	NA
WP_079227881.1\|2108015_2109281_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-52	43.0
WP_101854042.1\|2109495_2109978_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	3.2e-18	43.3
WP_012212364.1\|2110136_2111108_-	EamA family transporter	NA	NA	NA	NA
WP_014564334.1\|2111175_2111820_-	hypothetical protein	NA	NA	NA	NA
WP_101854043.1\|2111837_2112338_-	hypothetical protein	NA	NA	NA	NA
WP_101854044.1\|2112921_2113779_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_023190665.1\|2113930_2114410_-	hypothetical protein	NA	NA	NA	NA
WP_012212366.1\|2114507_2114870_-	hypothetical protein	NA	NA	NA	NA
WP_012212367.1\|2114938_2116237_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.7e-18	33.5
WP_012212368.1\|2116240_2117530_-	adenylosuccinate synthase	L7Y4J5	Megavirus	5.8e-67	36.3
WP_023190666.1\|2117740_2118733_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	1.7e-130	67.3
WP_101854045.1\|2119171_2120194_-	DUF871 domain-containing protein	NA	NA	NA	NA
WP_012211358.1\|2120261_2121440_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_012212371.1\|2122053_2123067_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	2.1e-64	41.4
WP_012211358.1\|2123556_2124735_-\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_082990701.1\|2126067_2126904_-	McbB family protein	NA	NA	NA	NA
WP_014919599.1\|2126896_2127613_-	AAA family ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	3.5e-13	28.6
WP_023190658.1\|2127609_2128341_-	hypothetical protein	NA	NA	NA	NA
WP_003625059.1\|2128395_2128686_-	hypothetical protein	NA	NA	NA	NA
WP_079227714.1\|2129247_2129400_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_012212372.1\|2129420_2130812_-	APC family permease	NA	NA	NA	NA
WP_065866740.1\|2131861_2133235_-	amino acid permease	NA	NA	NA	NA
WP_101854046.1\|2133280_2134633_-	amino acid permease	NA	NA	NA	NA
WP_101854047.1\|2134724_2135489_-	hypothetical protein	NA	NA	NA	NA
WP_012212376.1\|2135582_2136224_-	signal peptidase I	NA	NA	NA	NA
WP_012212377.1\|2136330_2138454_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	2.9e-116	40.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015496

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection