CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP021553	Bifidobacterium breve strain DRBB28 chromosome, complete genome	4 crisprs	DEDDh,cas3,WYL	1	2	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021553_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021553_1

156381-156717

Orphan

Consensus_repeat	Method
TACTGGTGGTTTTGCCCCGCTGAGG	CRISPRCasFinder

6 spacers

The CRISPR arrays of NZ_CP021553_1

>merge|NZ_CP021553|1|156381-156717|CRISPRCasFinder
TACTGGTGGTTTTGCTCCGCTGGTGCGTTGTTAGCGGTGCTTTTTTACCAGCTCTTGGCGGGATAGCTCCGCTGAGGAGCTGTCAGCGGTGCAAAACTTCCAGTTATTGGTAGTCTGGCCTCATTGAGTATTAGTAAGCGGTGTAGAGCTGCCAGCTACTGGTGGTTTTGCCCCGCTGAGGGGTTGTGGACGGTGCGGAGCCCCCATGTACTGGCGGTTTTGCCCCGCTGAGGAGCTGTCAGTGGCACGAAGTTTCCAGTTACTGGTGGTTTTGCGTCGTTGAGGGGTGCTGAGCGACGCTTTTATGCCAATTGCTGGCGATTTTGCGCCGCACAGG

>NZ_CP021553|1|1|156381-156717|CRISPRCasFinder
TACTGGTGGTTTTGCTCCGCTGGTG	CGTTGTTAGCGGTGCTTTTTTACCAGC
TCTTGGCGGGATAGCTCCGCTGAGG	AGCTGTCAGCGGTGCAAAACTTCCAGT
TATTGGTAGTCTGGCCTCATTGAGT	ATTAGTAAGCGGTGTAGAGCTGCCAGC
TACTGGTGGTTTTGCCCCGCTGAGG	GGTTGTGGACGGTGCGGAGCCCCCATG
TACTGGCGGTTTTGCCCCGCTGAGG	AGCTGTCAGTGGCACGAAGTTTCCAGT
TACTGGTGGTTTTGCGTCGTTGAGG	GGTGCTGAGCGACGCTTTTATGCCAAT
TGCTGGCGATTTTGCGCCGCACAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021553.1\|WP_003827968.1\|158899_159952_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP021553.1\|WP_019727678.1\|148440_149484_+\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NZ_CP021553.1\|WP_106641869.1\|172265_174101_+\|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl\|CDD\|374637
NZ_CP021553.1\|WP_106642141.1\|167754_172161_+\|choice-of-anchor-A-family-protein	unknown	unknown	gnl\|CDD\|380024
NZ_CP021553.1\|WP_003832504.1\|146669_148253_+\|ClC-family-H(+)/Cl(-)-exchange-transporter	unknown	unknown	gnl\|CDD\|238504
NZ_CP021553.1\|WP_050824529.1\|155099_156152_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_CP021553.1\|WP_025221006.1\|157138_158506_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP021553.1\|WP_014483283.1\|153395_155030_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP021553.1\|WP_106641868.1\|163731_165546_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
NZ_CP021553.1\|WP_003832411.1\|160379_161432_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP021553.1\|WP_052789676.1\|174356_175316_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676
NZ_CP021553.1\|WP_003827956.1\|144124_145192_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236406
NZ_CP021553.1\|WP_025300947.1\|161708_162500_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641866.1\|145359_146646_+\|adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904
NZ_CP021553.1\|WP_015438242.1\|151664_153191_+\|sucrose-phosphorylase	unknown	unknown	gnl\|CDD\|237528
NZ_CP021553.1\|WP_106641867.1\|162496_163525_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197670
NZ_CP021553.1\|WP_025341498.1\|143126_144062_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP021553.1\|WP_014483280.1\|150152_151238_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380514
NZ_CP021553.1\|WP_100199016.1\|148811_149879_+\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NZ_CP021553.1\|WP_003827972.1\|165817_166849_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525

Protein	Function_ID	Function_description	E-value
NZ_CP021553.1\|WP_003827968.1\|158899_159952_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP021553.1\|WP_019727678.1\|148440_149484_+\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	1.76011e-22
NZ_CP021553.1\|WP_106641869.1\|172265_174101_+\|isopeptide-forming-domain-containing-fimbrial-protein	gnl\|CDD\|374637	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain. GramPos_pilinBB is one of the major backbone units of Gram-positive pili, such as those from S.pneumoniae. There are three major pilin subunits that form the polymeric backbone of the pilin from S. pneumoniae, constructed of three transthyretin-like, CnaB, domains along with a crucial N-terminal domain, D1. The three Cna-B like domains are stabilized by internal Lys-Asn isopeptdie bonds, Gram-positive pili are formed from a single chain of covalently linked subunit proteins (pilins), usually comprising an adhesin at the distal tip, a major pilin that forms the polymer shaft and a minor pilin that mediates cell wall anchoring at the base.	4.57299e-11
NZ_CP021553.1\|WP_106642141.1\|167754_172161_+\|choice-of-anchor-A-family-protein	gnl\|CDD\|380024	pfam17802, SpaA, Prealbumin-like fold domain. This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae. Some members of this family contain an isopeptide bond.	1.08805e-11
NZ_CP021553.1\|WP_003832504.1\|146669_148253_+\|ClC-family-H(+)/Cl(-)-exchange-transporter	gnl\|CDD\|238504	cd01031, EriC, ClC chloride channel EriC. This domain is found in the EriC chloride transporters that mediate the extreme acid resistance response in eubacteria and archaea. This response allows bacteria to survive in the acidic environments by decarboxylation-linked proton utilization. As shown for Escherichia coli EriC, these channels can counterbalance the electric current produced by the outwardly directed virtual proton pump linked to amino acid decarboxylation. The EriC proteins belong to the ClC superfamily of chloride ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge. In Escherichia coli EriC, a glutamate residue that protrudes into the pore is thought to participate in gating by binding to a Cl- ion site within the selectivity filter.	5.26981e-155
NZ_CP021553.1\|WP_050824529.1\|155099_156152_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	4.49877e-76
NZ_CP021553.1\|WP_025221006.1\|157138_158506_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.36914e-175
NZ_CP021553.1\|WP_014483283.1\|153395_155030_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.05983e-13
NZ_CP021553.1\|WP_106641868.1\|163731_165546_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP021553.1\|WP_003832411.1\|160379_161432_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP021553.1\|WP_003827956.1\|144124_145192_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|236406	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional.	0
NZ_CP021553.1\|WP_003827972.1\|165817_166849_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.90057e-78
NZ_CP021553.1\|WP_106641866.1\|145359_146646_+\|adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_CP021553.1\|WP_015438242.1\|151664_153191_+\|sucrose-phosphorylase	gnl\|CDD\|237528	PRK13840, PRK13840, sucrose phosphorylase; Provisional.	0
NZ_CP021553.1\|WP_106641867.1\|162496_163525_-\|hypothetical-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	0.00501315
NZ_CP021553.1\|WP_025341498.1\|143126_144062_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.28172e-19
NZ_CP021553.1\|WP_014483280.1\|150152_151238_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380514	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs. This group includes the ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs. Qymf is a strict anaerobe that could be grown in the presence of borax and its cells are straight rods that produce endospores. This group is a member of the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.57412e-79
NZ_CP021553.1\|WP_100199016.1\|148811_149879_+\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	2.57116e-24
NZ_CP021553.1\|WP_052789676.1\|174356_175316_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	1.49544e-85

>NZ_CP021553.1|WP_050824529.1|155099_156152_+|LacI-family-transcriptional-regulator
MVGMRDVAKTAGVSLSTVSLVVNNTGYVSDDMRAKVEAAMRQLNYIPNELARNLYRNRTNTIGVIMPTIAHPFFATLTAHLQREFAARDLKTLLCSIADADKGEGEYVDMLQRHMMDGIVMAAHTEHPGGYWTSIHRPIVAFDRTLGEGVPAVRSDHEQGGRLIARQLIDSGARHVVLVGGPRSQFAEATTFPTIRYHLTVERMLADAGIACDYVEAGIVADISAHEATARAIFERYSDVDALVGSDLVASVALQEALRRGISVPRDLQIIAYDGTFMAETAGMRLTAVRQDFPAVAAALASRMDSQIAADNGTTSAAAAEGGNAVAANGGQSTSEDIISVTLIPGETTR
>NZ_CP021553.1|WP_014483283.1|153395_155030_+|MFS-transporter
MLEPYVRPGIDDRPDLDKALSPEDKDAVARLAIKDRRRPPEASADQPEAQAVRLAAAGSSAAAAAAASVDAPAPDLSSAYLDMRDPMVAANGQRPTAVQISRLNWGFFVASILVGAPWAALNTIAMPNAVARLFDYDTASAISVTINPSTGRPLPVATDLVMPLAVLVVVGVVASMFAMPLVSALSDRTRIPLGRRTPWMVAGGVLCALITLVLGQNTGLVVLCFFWALMQFAYAMISVPLASAISERVPDKFRPCIERWHGIGVMLGQALGVCMGALGVMFDSFTPFAYTAVLFAVSGILTVIMLPKEPSSQEQPHQRFESSQVFDQLRPPAHAPAFARVFAARVCMMTGVGLTGVFLWYLVRFWVYGKAVVFTSAPLTIPAGLLIAGMAAATLIGAALASWAAGPISEKIEERNIATTAVVAASCLLYAIGVAVAWGLGVWSTGTARENGMLLFALISGFAFGVYDALGLELVMNALPDPRNAGHDLGIYALANSVGLALAAIIGAVLVSAFASSFGYYLLFPSAIVMVFLAGIITLSSKAE
>NZ_CP021553.1|WP_015438242.1|151664_153191_+|sucrose-phosphorylase
MKNKVQLIAYADRLGDGTLSSMTDILRTRFDGVYDGVHVLPFFTPFDGADAGFDPIDHTKVDPRLGSWDDVAELSKTHDIMVDAIVNHMSWESAQFQDVLKNGEHSEYYPMFLTMSSVFPNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSAKGWEYLMSIFDQMAASHVRYIRLDAVGYGAKEAGTSCFMTPKTFKLISRLREEGVKRGLEILIEVHSYYKKQVEIASKVDRVYDFALPPLLLHSLFTGHVEPVVHWTEIRPNNAVTVLDTHDGIGVIDIGSDQLDRSLKGLVPDEDVDNLVNTIHANTHGESQAATGAAASNLDLYQVNSTYYSALGCNDQHYLAARAVQFFLPGVPQVYYVGALAGRNDMELLRKTNNGRDINRHYYSTAEIDENLERPVVKALNALAKFRNELPAFNGEFSYEADGDTSITFRWIAADGKTKAALIFEPGRGLGTDNTTPVASLAWTDAAGDHETDDLLSNPPIADID
>NZ_CP021553.1|WP_014483280.1|150152_151238_+|LacI-family-transcriptional-regulator
MVGMRDVAKKAGVSLSTVSLVVNGNGYVSDDMRERVRKAMQLLNYVPNELARNLYHNRTNLVGVIVPTIRHPFFATFTAHLQHALAAQGLRTMLCSTADEADGEIQYVDMLRRHMMDGIVMCAHTSHPGDYWTSIHRPIVAFDRVLGDGISSIGSDHEQGGRLIAQMLIRNGAKHVVMIGGPRDQFFDLAARGEVEEGPFDLGKTTFPTVRYYLTLEQELTSAGVKYEYVEAGEVMDFAGYHRAVSNALDKVTTDGVDAVVSSDIGASFCVREALSRGISIPDELQIVAYDGTYLTDLAGMKLTAVAQDFSAIAQSTADHIVQAIANEEVAAANASRRDIPKPFEPNVLIPMTLVPGDTTR
>NZ_CP021553.1|WP_100199016.1|148811_149879_+|CrcB-family-protein
MAASPGAAGCQPWRWARLARRAFDDVRRDAGNDGRSARAAYRQCAWLSCGKFCRRFAHCRRRRGSDAGTAVTEYSKAGSGCVFSCFRVRFCRIGHAGRTPCESGRRGAFCRAGRNGSRADGPADCTDGTGSASRNANRAADCHPAYADRPRSADSSAGRSSAGTVIAAVVARAGYSRLGAAARADSAVAADPAAGQPASAQLRAQTDHCGDFACRRPGYRGGALMMWMICLFGGLGAMARYVLDVSIQRGWNRENRRTNRNFPLSTLVINGVASLCAGIAMMSYYSQSVDMDTVMMFVVGFLGGFSTFSTALNEVVSLIRQRRFTLALGYGIATVAVPLICVATGFGIALLANPA
>NZ_CP021553.1|WP_019727678.1|148440_149484_+|CrcB-family-protein
MESQEQSPGDVVTAGEDSHPITQAIDTVEVTHAGATAPAANTMDPPTIPLAPMKRMQARFNPLADGLMYVVVFVGGFVGVGCRHALDMLLPSVSGTPFVVGTFVSNMVACFLFAMLTEFMATASWLRRRVRQVVSRGVGLGLLGGLSTMSGVMLETMAGLHERHIASALGYLAGNFAGGLLTAAAGVVLMQALLSRSTRKRVRGAFSAVSVSDSAESDTQGVRHVKVADVARSAAQAAMEAAQTAQQIAQTGQVPRVETPTVPPTAIQPMQTGHVPQIPPLVVPQLAQSSQPLLREPDTPDLGQLPEPIQQSQPIQQPANPLPPSFEPKPITAEISLVADLATGEVR
>NZ_CP021553.1|WP_003832504.1|146669_148253_+|ClC-family-H(+)/Cl(-)-exchange-transporter
MTGNDAAHDIRRLIPRFDHLKWKMAAAGIVIGLVSGLLVVVYRLGIEYGTDASRWIYARIRETPWLIAPWAVAAVAAALAIAWMVGKEPMAGGSGIPQTNGVVICGLKMRWQTILPVRFVGGLLGALFGLSLGREGPSIQIGASGAQCVSHRLRGRRREDMQEHYLVTAGAAAGLSAAFSAPLSGMMFALEGVHRSFSPAILMGATAASLTADFVSKYCFGLRPVLDFGDIGQLSLEEYVWLIPLGLVAGLVGSLMNRSLLGFQTLYCKLPAWSRPMIAIAIALPVGIWLPDVLGGGSNLIDTAEHARVGLGMLCLLFVAKMLFTSTSFGSGAPGGIFMPILAVGSLAGGICGEVLHRFGNLPSDAVAVFAVCVMTGTLAASVKTPITSILLAVEMSGTLTHMLPVAAVAFVALLVSDLLRTKPIYGELLERYVRAQGMQMAIASHVGSGIMELPLEMGAIADGKRVRDVRWPSGCLIIGLRRGESEIVPRGDTRLRAGDYLVVLFSGEEEREVRPAMRRLCDARLD
>NZ_CP021553.1|WP_106641866.1|145359_146646_+|adenylosuccinate-synthase
MPGIVLIGAQWGDEGKGKATDLIGTKVDYVARFNGGNNAGHSVVVGDESYALHLLPSGIINPNLTPVIGNGVVVDPEVLFEEIDGLESRGIDCSRLLVSEAAHIIAPYHRTLDKVTERFLGKHKIGTTGRGIGPAYADKINRIGIRVHDLFNADHLHDKVEASLHQKNQMLVKLYNRRAIDVDQTTDELLKLGERLKPYVANTGLILNKALDEGKTVLFEGAQATMLDVDHGTYPFVTSSNPTAGGACTGTGVGPTKITRVIGVAKAYVTRVGEGPFPTELLDKSGEWLRQQGHEFGVTTGRPRRCGWFDAVVNRYASQVNGLTDIVLTKLDVLTGLKEIPICVAYDVDGERHDDMPTDQAAFAAAKPIYETMPGWNEDISNCHSFDDLPATCQAYVKRLEELSNCRISVIGTGPQRDHVIQINSLVD
>NZ_CP021553.1|WP_003827956.1|144124_145192_+|class-II-fructose-bisphosphate-aldolase
MTIATPERYAEMLDAARRGGYAYPAINVSSSQTLNAALKGFADAESDGIIQVSVGAAAYLSGIGVNDRVTGSLALAAFAHEVAAKYPNITIALHTDHCAKQYLDEWVRPLLAHEADQVAHGQEPTFQSHMWDGSTVPLKENLDIAEELLDKSQAAHTVLEIEIGAVGGEEDGYSAKIDERLYSTPADGLEVARRLGLGERGRYMAAFTFGNVHGSYKPGVVKLRPALLGDIQSRVARAVVEGELPSAAGIVDFPNGKPFELVFHGGSGSRPEEIAEAVSHGVIKMNIDTDTQYSFTRPIADHVFENYDKVLKIDGEVGEKKFYDPRSWGRKAEESMSARVAEACKQLGSAGKALR
>NZ_CP021553.1|WP_025341498.1|143126_144062_+|EamA-family-transporter
MCEPKTAATNGQPTPTLERTPHDIFVGAGLALAGGVFWGVNATVSKLLMNDYHADPLWIACVRELLAGVVFLVCAGIFTPDKFINSLKDYRSYPRLLLCAFFCVLMVQVSYLKAIDWTNSGTATVLQTLNLLVVLVFVCIMGKRLPGKRESIGVVLAFVGTVLIATGGDLSQLSLPLPGLLWGLTDAVCTSLLAILPIALMAKWGNFMANGVMFIVSGLMLLPLVHPWTTAPALDWFGIGLMVFTVVFGTFGAYWLFLGGTQRCGAMRATMLGTSEPVTATITGVLFAGAVFTPTDLVGFAMIIIMVFLVR
>NZ_CP021553.1|WP_025221006.1|157138_158506_+|MHS-family-MFS-transporter
MTAAVEETGLGQAASKATAMVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFFSDKANPTVALLMSLLTFAIAFIARPLGSLVFGHFGDRMGRKTTLVVSLMTMGVGTFLIGCLPTYDQVGVAAVAILCLLRFIQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIGFFLSNGTYFVLESFNDQSAMLAWGWRVPFLLSAILVIVGLVVRVHMEETPIFRMAQEQKKVVKSPLTEVFRKSWRQVLQATFLVAVTYTLFYTLATWSLAWGTKDTANGGGSLGFTNQEYLLMLMISICVFALFIVLSCLYADKLGRRRVLTFSSCALVVFAVLFPFLLDGQVVGQHNFFANMVFLCVGFALMGIAFGPIGAFLPELFDANVRYSGSGIGYNLAAIVGAAFVPTIATWLAHNWGVHSVGLYLAVMAVCCLVSVLTCKETKDVDFTK
>NZ_CP021553.1|WP_003827968.1|158899_159952_+|ketol-acid-reductoisomerase
MAATIWYEKDADLSVFDGKKVAILGYGSQGHAHALNLRDSGVDVVVGLRPSSKSVEFAKEQGLEVKPVGEAVAEADVVMILLPDQYQAKVYEEEVEPNLKPGAALAFAHGFNIHYGYIKPSEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPDGKTWPLCLAYAKALGALRAGAIKTTFTEETETDLFGEQDVLMGGINHLCDLGFDVLTEAGYQPEIAYFEVFHELKMLVDLANEGGLNKARWSCSDTAQYGDYTSTVITDETKKRMQYQLKRIQDGSFAKEFMDDQAAGAPKFKKLQEEFSHPHLETVGPKLRAMFSWNNAEAKDKDEAESFNGKIARTQVQ
>NZ_CP021553.1|WP_003832411.1|160379_161432_+|ketol-acid-reductoisomerase
MAAQIWYENDGDLSVLEGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVDFAKEQGLEVKSVAEASAEADVIMILAPDQYQRTIWANDIEPNIKPGAAVAFAHGFNIHYGYIKPTEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPRGDGWALTLAYAKALGALRAGAIKTTFKEETETDLFGEQNVLMGGVNKLVEMGFEVLTDAGYQPEIAYFEVCHELKMLVDLMNEGGLNKARWSCSDTAQYGDYTNTVINEDCRKRMEYHLQRIQDGSFAKEFIDDQDAGAPHFKELQEKYSNERIETVGPKLRAMFSWNKDGVKDADEANSFTGKIARAQVQ
>NZ_CP021553.1|WP_025300947.1|161708_162500_-|hypothetical-protein
MTQGLQLIRTAFAGYEDSYVIIGGTACDIIMTDNDLDFRATKDIDMVLIAEGHLREFAQRLWSFIRDGGYTSITKNSAQPHLYRFMHPSTYGYPTMIELFSRHPDFPIVPNSFLTPLHIANDVSSLSAIMLNDSYYRLLQQGRESIQGISVLNEKYLIPFKAKAWLDLNAREQHGEHVDGKDLKKHKYDVFRLAQLLAPEDRVSLNDEAYHDLADFLGEISHETLPMKQLGIRGTQQDIIDLIAGVYQLSIPPRDESSTTMSA
>NZ_CP021553.1|WP_106641867.1|162496_163525_-|hypothetical-protein
MDAEHYIRETLGLPCQITSWDGTASLPLFLANGRTFSKLTIDNTSMLIASGEAHPFSITRVTADASRLEQRTDLPIVFQFPRLSAYQRKALIQNHVPFIVPGTQLYIPALGMVFTQRISSRPLENAQDIEVRPFSPATQLVWLYLLYSNESKIQSDIARALQFTEAQVSVAVTLLEQLAFVHRTKQGRSNSVELLTSRQTSRLDLLKSSWHLLKSPIFSKYTVTNRNRQMIADELIPAGEFALSRRTQLSTPKLRIYAVERHWLKQHNKELCIIDPALEKVPDNAYILELWRYDPRLLAQYTQEDYLADPISTALTLGEIADERLEDAIQESIRNTFSGATI
>NZ_CP021553.1|WP_106641868.1|163731_165546_-|glycoside-hydrolase-family-13-protein
MTANNLNDDWWKQAVVYQIYPRSFKDVNGDGIGDIAGVTEKMDYLKSLGVDAIWLSPFYPSDLADGGYDVIDYRNVDPRLGTMDDFDAMAKAAHEAGIKVIVDIVPNHTADKHVFFKEALAAEPGSPARDRYIFRDGRGEHGELPPNDWQSFFGGPAWARVADGQWYLHLFDKAQPDVNWKNPDIHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLESKPLEELGREYSVVGVLNHDFSHPLFDRREVHDIYREWRKVFNEYNPPRFAVAEAWVVPEHQHLYASMDELGQSFNFDFAQASWYADEFRAAIAAGLKAAAETGGSTTTWVMNNHDVPRSPSRYGLPQVKGAPYHQLPHDWLLRNGTTYPEDRELGTRRARAAALMELGLPGAAYIYQGEELGLFEVADIPWDRLEDPTVFHTAQATMDKGRDGCRVPIPWTAANEPTLADFSRPIPANDGTGENHVPLCAAGQFGTGASFGFSPAVRADGVTSSADPHLPQPLWFKDYAVDVEQADPDSMLALYHAALAIRQESLTATRDTTAEQVDMGPDVVAYTRAAVGGRTFTSITNFGTEPVALPDGSVVLASGPLTPEGQLPTDTSAWVVQ
>NZ_CP021553.1|WP_003827972.1|165817_166849_-|LacI-family-transcriptional-regulator
MAKASIQAVAKEAGVSVSTVSRTFAKPDLVLPETRDKVMAAAEKLDYSISRSAAALKSGQSFRIALLASETITTWFNANIFAGLDSVLRPAGYDTVAYPMRNAEERHDFFADLPVRRNADAVIVSSFNIEPAEVERLKHMHVPIIGINIPSTDGFDSGVSIDDRTATRAAVEHLIALGHRGIAFVGGTPAETNMRYSAESRLQGVLDAQAAHPELTVTNLQVPRGATETSAALNAVLTAPAGTTAFCFEDDELALPVLYRLRQYGKRVPQDISIVGFDDVEMSQAVGLTTMHQDPFAMGADAGRMALEAIAGEPIEPAFIQPDAPLVLRETTAPPAAPVPAQG
>NZ_CP021553.1|WP_106642141.1|167754_172161_+|choice-of-anchor-A-family-protein
MGTEADPATERDSGVATWVGGDMYVGKKSDNLTNVDGPDASYSAEAEGLTVVNGKLMLHPRKNSWNGKGFRFGVAGFGTQYRPAEGSTALVVGGNTGTVMDSATSTADVKAWNKPGFIDGHSHVGSLSGSQSDVWGRDGTSSIGSYNGASVNWQKDKSGNTQNQDAGNLTKVSVKATDGGAATDKDFSKDTFYQGYVVDDIASPLAKQNNTGTVSSSISTWPGLTRHKYNYLEEGPNAASGISYTFKYDDTTKYGTDRGIASTTSYTNREKLITFTGTNNASMEVFNLDASMLSDTDENGTLYRGVGFAFANIADTASVVINVTGNAGNISFHNGWQFWWNGAEISDGYSNYNNTDELKKKSAAYDKAAQKILWNFSNTDNLTIYGGVANEDGTNTNADKITQDDAAAAMMGSIIVRGNFESHVSTNGRVYTGGDFSMYNPYKAWVFNQAGANDGDSASVLDMDQERHNFPWNGSYTESCSAIAWQKADESGTLLGGTTWAVYGKYDDAASGKNALLTVQDNAFYDKDSADGRFTVEGLKPNATYYIKEVSAGNDYQLNTNVYYVATGDSSATPVNVTQSVTKTDGAYTYGSADMTDGKIVNKKNGHEVSWSKVDADTNKELAGSEWQIQQVKDGAATKSWNVTDNTSKATGVTVNPTSATLDSTNGWKTDLTAAVDPKDALQEVAWTFTDKDGNAADSSTVAVLTRTGNLKTTVTGISSIDATVYVKACSVSNPEVCSALVTIKVKAMSVKDFTVKDSSNRTVENNSTITAAAVDSTLTFTASSTPAVPITWESSNKSVATVTSSGENGQKATVTMTGFGSAVITAKAGDKKVSFTVKVPSTTVYFKKSLMNWSKYYVYYNAGNNNWKFVEMSQSCGDYVYAILPKQSPGTEFLFHGDDENTSTNKWYQGSNKSDFKFTGNEVQVVNLYNDSQVSTAPAGCPASAAAAAQSNDAAVLNENATPADDPQPSDADGVAENAIDDGAKAISCTAADGENGRPGVKCDMDTAAGKFKVGGLDAGTYWLHETTAPDGYAINKTLYQFTIDANGNVTWNGGWASGEATGAIDEKLKPGDSNAISDTPTEVTWNKVDTKGGKLAGSQWKIVGPSPAMDVYCVADNVTVDANGATTPAGIEFTGCTGEKLSDAANTADEAGVITVRGLPVGTYTLTETKAPDGYVATTTVYTLTISDTEASTVVAQTATDRPTTRSGGNREAAANVPNASAPVNIQIPVKKSVKYTSWPKDSNGNYVNFNFKIEATKSTVDANPAAPMPAECSSSDATKNDCTISLAPKSDADDLSNVIAKFGKMTFTDANLAAAAGDASDYAKTYTYKITEIVPDSADAVENLRYSKAEYQVVVTLKQAKDSSGKLSGLSVSATMTRIKDDSGNAEAGGGKVIGTWSSTSTGSSAGTAVEATFVNTKVLTGLPTTGADWTGRLVLLVGDGFILAGVLIAGGHQLAKRRREEDSD
>NZ_CP021553.1|WP_106641869.1|172265_174101_+|isopeptide-forming-domain-containing-fimbrial-protein
MNTIFKRVISGAAALGIAVSGLAIGVSTAYAADPTTGSITINKSDAGQVDHSFDGWHLASLTNVTKDSTNKINGFLIDTDDNMVRTIVAAMTSDQKVAYEKDANYYSTDNAVANPMGYLVEKVFKDKSGKALSELTSPWGGDSSTLRVFAKSLSKELAKVGAPAADKTGDSALKTGENKELKQGLWFLKDVTTTDDTKGTNSIPIITPTTFDGAGSWGTVTLKNTTPTIDKKLVDSKGDGTYTPNTQPDYAVGDDVYYELTSTVPVYTGYDIDSTMMDATKTRIFKINDTASKALTVSAETVIESVKLTPAQGTAVTLVKDKDYTVTVAGYGDVNTPDTDAYKGGHVTTIDLGKYVNKAKGSKSATDGILEGATVTVIVKAKLNKDALISNPGNLQKNPNKVDLEYSNHPEEVNHAHKVPGPEVPVYAYKFDILKTDKAGTTKLPGAKFTIKAVSGTSKHDGKYLGSYGKDGWSYLDSEPAVTDTDGVFTTGKDGKINVSGLDAGTYEVHEIAPPDGYTAISLPKFQFTITPTVGDDAGCKTITVVALSLAKGADVRALLSQDGKTLNIWNAKNITELPKTGGVGLAMIVAVGALFIAASGIFALRARRKA
>NZ_CP021553.1|WP_052789676.1|174356_175316_+|class-C-sortase
MRSSTGAKQSGTRTQSRVFTVLSVLFLLIGFAIITTPFVMRAISEYQQNATVQQTQREVDGWPYPQAENQLKTAREYNKKLVAGGQAAIGEVKDPFASNAGQSTTSGADDSMAAKDQEYQSLLDAGQGVMGSIRIPKIDVNLPIYHGTSEDALAVGAGHLYGTSLPVGGKSTHSVITGHRGLPNSLLFTRLDEMKKGDSFYIEVMGKKLGYKVDRITVIKPDDSSKLRITKGEDRVTLMTCTPYGVNSHRLLVSGVRAEIPEEVPDPDDVHGINTTWLALGAIVLLAVLLAFIVILMRRKQKRDREFAGLARHAARPTK

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Crispr_ID: NZ_CP021553_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021553_2

432481-432653

Orphan

Consensus_repeat	Method
CGTCCTGAACGCCATCAGCGGCGTATGGACGAGCGTATGGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP021553_2

>merge|NZ_CP021553|2|432481-432653|PILER-CR
CGTCCTCAACGCCATCAGCGGCGTATGGACGAGCGTCTGGAACGCGGTCAGGTCCGTCGCATCCGCCATCTGGAACGCGATCAGCGGCGTGGTGTCCACATGCATCCAGAATGTGCGCAACACCATCTCGACCGTCCTGAACGCCATCAGCGGCGTATGGACGAGCGTATGGA

>NZ_CP021553|2|1|432481-432653|PILER-CR
CGTCCTCAACGCCATCAGCGGCGTATGGACGAGCGTCTGGA	ACGCGGTCAGGTCCGTCGCATCCGCCATCTG
GAACGCGATCAGCGGCGTGGTGTCCACATGCATCCAGAATG	TGCGCAACACCATCTCGACCGTCCTGAACGCCATCAGCGGCG
TATGGACGAGCGTATGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021553.1\|WP_106641919.1\|438688_439411_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_015512449.1\|441422_442658_+\|Reverse-transcriptase-(RNA-dependent-DNA-polymerase)	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238828
NZ_CP021553.1\|WP_106641914.1\|428876_429464_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641909.1\|427085_427400_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|256308
NZ_CP021553.1\|WP_077420486.1\|433333_434116_+\|3-hydroxy-3-methylglutaryl-CoA-synthase	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641922.1\|443330_444563_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|119379
NZ_CP021553.1\|WP_106641916.1\|429849_430242_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375127
NZ_CP021553.1\|WP_106641915.1\|429517_429838_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641918.1\|437935_438538_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP021553.1\|WP_015512448.1\|442588_442819_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641920.1\|439427_441008_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106642142.1\|434135_437927_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377677
NZ_CP021553.1\|WP_106641921.1\|442946_443270_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641910.1\|427411_427864_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|286444
NZ_CP021553.1\|WP_106641923.1\|444647_444914_+\|holin	unknown	unknown	gnl\|CDD\|374894
NZ_CP021553.1\|WP_106641913.1\|428479_428845_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641911.1\|427860_428196_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106641912.1\|428207_428483_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_010081005.1\|425601_426135_+\|helicase	unknown	unknown	gnl\|CDD\|372987
NZ_CP021553.1\|WP_106641908.1\|426180_427086_+\|phage-major-capsid-protein	unknown	unknown	gnl\|CDD\|377449

Protein	Function_ID	Function_description	E-value
NZ_CP021553.1\|WP_015512449.1\|441422_442658_+\|Reverse-transcriptase-(RNA-dependent-DNA-polymerase)	gnl\|CDD\|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	1.92351e-22
NZ_CP021553.1\|WP_106642142.1\|434135_437927_+\|phage-tail-protein	gnl\|CDD\|377677	pfam06605, Prophage_tail, Prophage endopeptidase tail. This family is of prophage tail proteins that are probably acting as endopeptidases.	3.93656e-31
NZ_CP021553.1\|WP_106641910.1\|427411_427864_+\|hypothetical-protein	gnl\|CDD\|286444	pfam09355, Phage_Gp19, Phage protein Gp19/Gp15/Gp42. This family of proteins are functionally uncharacterized. They are found in a variety of bacteriophage.	6.58516e-14
NZ_CP021553.1\|WP_106641923.1\|444647_444914_+\|holin	gnl\|CDD\|374894	pfam16938, Phage_holin_Dp1, Putative phage holin Dp-1. Phage_holin_Dp1 is a family of putative phage-holins from Gram-positive bacteria, largely Firmicutes, with two probable TMSs. The family shows lytic activity.	2.52148e-14
NZ_CP021553.1\|WP_106641909.1\|427085_427400_+\|hypothetical-protein	gnl\|CDD\|256308	pfam11133, Phage_head_fibr, Head fiber protein. This head fiber protein is also refereed to as Gp8.5. Gp8.5 is a structural protein in phage. It is a dispensable head protein.	9.44007e-05
NZ_CP021553.1\|WP_106641922.1\|443330_444563_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|119379	cd06417, GH25_LysA-like, LysA is a cell wall endolysin produced by Lactobacillus fermentum, which degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. The N-terminal glycosyl hydrolase family 25 (GH25) domain of LysA has sequence similarity with other murein hydrolase catalytic domains while the C-terminal domain has sequence similarity with putative bacterial cell wall-binding SH3b domains. This domain family also includes LysL of Lactococcus lactis.	4.28941e-101
NZ_CP021553.1\|WP_106641916.1\|429849_430242_+\|hypothetical-protein	gnl\|CDD\|375127	pfam17318, DUF5361, Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	0.0094615
NZ_CP021553.1\|WP_010081005.1\|425601_426135_+\|helicase	gnl\|CDD\|372987	pfam14265, DUF4355, Domain of unknown function (DUF4355). This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length.	0.00114753
NZ_CP021553.1\|WP_106641908.1\|426180_427086_+\|phage-major-capsid-protein	gnl\|CDD\|377449	pfam05065, Phage_capsid, Phage capsid family. Family of bacteriophage hypothetical proteins and capsid proteins.	3.70485e-13

>NZ_CP021553.1|WP_106641916.1|429849_430242_+|hypothetical-protein
MLATAPDALEADFQRFYGLNPDLIWTGELPANRAAALAANLPRQAIVWQKLDPRLAWDDQTYLLADIRDSLAFLAWTKTKEASRKGARWRGQLQRPGTVRHEATGGEVMAMDDEQLAAYLAAPRTTIREA
>NZ_CP021553.1|WP_106641915.1|429517_429838_+|hypothetical-protein
MAAKQPQDRKTPKNQPKTVEAMGVTLAVSPAIFDDLDMVEYLYDLQTAQEGDGTGAFAIVPFLKKLCGPQYTAMKDALRDPDTGRVSIDKVSEFIAQLLEQVAPNS
>NZ_CP021553.1|WP_106641914.1|428876_429464_+|hypothetical-protein
MAETNHNNKKNVSLGKPKKTGCLYYAPAGTALPTDATTALPATYTCVGYLSEDGVTNATDTDTTDINEMGGIKVLSEISGYGETWQFSMIETNEASLKLRFGTANVTGTADKLTVYHAIPSGESLVLVFEIAMTGNRVKRIVVADGTITEFDDTTYSAGDAIGYGVTMSANPSDLINGATSVEYIANVATASLSK
>NZ_CP021553.1|WP_106641913.1|428479_428845_+|hypothetical-protein
MRLNLEKTVKDWIDADPDGDGLTAYLEVPADRPQRFVTIERVGGRELEYSSRPTIAVQVWAESRWQAAQLAAGQVLPRLLDLDLLDPIAAVSVESVIDFPDPGPPPQPRYQITISLDAAAQ
>NZ_CP021553.1|WP_106641912.1|428207_428483_+|hypothetical-protein
MAKVKLNLAGFRAIRQSAPIQQTIDQQATLIAARANSMAQVEGATYEAATHVSTPKGSVALATTGHGSEGNVKAMEDNAKHNTLLKSVKQQ
>NZ_CP021553.1|WP_106641911.1|427860_428196_+|hypothetical-protein
MRGETITLIHRVKAGEDPGGGIIWNTREEQVDDVLIQDGRQSNSTDPIRPDGIRTAKTIHMPRAWPYRSLRGAKARIDGVEYTVIGDPRPYTGGMTPTRWNLTVELADTRG
>NZ_CP021553.1|WP_106641910.1|427411_427864_+|hypothetical-protein
MDGYPSTPLNLSDGTTVTADGGGEDETGDEKPFAQAGDLEARWHALTGEEYNRAEALLADASDLIRTTCPRWHTAKPATLKRIACMAVKRAMQAGPDMSGVTQSTQTAGSYSESLSYANPAGDLYLTTSEKEALGGDGEAWAYDMAGGAA
>NZ_CP021553.1|WP_106641909.1|427085_427400_+|hypothetical-protein
MAAPLTQTLVVQEHDEADETGLSIPVRLVKPDGTPFAEGVATIAWSAIAGKPSTFAPPAPTASTRGGVLQQAAEAQLASNADSATIIAKVNSTLTKLKAAGILA
>NZ_CP021553.1|WP_106641908.1|426180_427086_+|phage-major-capsid-protein
MALDTSKVLLPKEVATVITKRAKDTSTIAALSPSEPQLFLDKDYMVFTGNSEAEVVAEGAQKSSYEETLTPVVGKRFKVQTTTRLSNELQWADDDAKLEIISKIQADQAAAMGRVLDYVVYHAFDPKKKTTLEGFNALAKTAVGVPATDDRVADIDSLAEAVSDEYDINGIALSKTMANELRKIRVPSTGQRFYPEIPINLQVGNLDGIPAATSGTVNGRLITPATGILAFLGDFRLIKWGMVRDIWSEIIEYGDPDNTGKDLKGVNQIAYRTEAMYSYAILDPKGIAVLKKPTSSVKASK
>NZ_CP021553.1|WP_010081005.1|425601_426135_+|helicase
MFLTPTPHHIRFVAAPPEGGESTGGTGQPPASAGTENAGDPIDWEAKYKEALGHSRDWEKKAKANKAAADELEKLKESQMSETEKAAKRTQELEAQVAAYKAKEQQADWKAQVSAETGVPADVIEGDSLEAMQSHAKRIHELLNPKPKAPAVHGADRQPSGKGPNESMVNYLRNLGL
>NZ_CP021553.1|WP_077420486.1|433333_434116_+|3-hydroxy-3-methylglutaryl-CoA-synthase
MLYQRRMRLPHVEDPTLNGVPLERMMLSLSSDGVTIDAAKSTLSMQDMPGRDGRLDLTLTDPTGAAYMGDRAITLSLYAIGGEDDILAAKTRLAALAGTIVSLSWRSLPGEYQGRMSLGAWEDKWAGDHQIATLVQAEIDAHPYLIGRSQSIALKTDANTIHVKGNRPCWPTWTLTPAADAKTVSIKDAHGHKLAVTSTTAITGRISIDTDPDHRELRVNGNLMTPTLESDYFPLLPGLNTLTLTGATAASLAYRPLTLI
>NZ_CP021553.1|WP_106642142.1|434135_437927_+|phage-tail-protein
MIFDRWGNPLGDLPYVIKAIRTRATDGTDTLDITTIGEINKDERIAFKDSMGRWAEYLCQSTQTARAAGMPVTVAYCTGSIAELSRTYIEDKRNRAANAKACLAKALEGTRWAVGTVETGTITGTANLAFYHCTVLEAVQKTADTYGLEVQTEYQPDPTGNRIGRRIIHLAEHRGTANTTKRFEYGKDLTQIKRDIDSGDVITRLYGWGKGIEQTNDQGEATGGYSRKISFADVNNGKPYIQDDQALADWGIVGADGTRHHSEASVDFPDCEDPKELLALTKNALKTRTTPVVSYTADVTALGQAGYSAEGTDVGDSVQIIDTSFATPLRLEGRILQIEEDLAGSLADTKITLGNIRQSYTQRLAAQQQALDKLVSNSGAWNSAAGGTGPYMKDLIDRINQIMNATGGYTYLKPGQGIYVYDKPEDQNPTQCIHIGGGYWRIADHKKANGDWDFRSLANGKGIFADTIFTGRLSDAAGLNFWDMDTGEFSLSARSTVGGKTVQEYADGALSDANSYTDQAKQAAITEAKRQADAADTAKLAEAKKYAETKATEALTAARAQSKSDSEAAKSAAQAYVDALDESLGQRSIFDRLTNNGQTQGIYLSGGLLYLNATYMRTGVLDAALVKAGRLTDKKGLNFWDMDTGEFSLSAQSTIGGNKAGSLATQTQAQKLATDAQAAANAYADSVGASTLSSARNDATAKADTALSGAKTYAETIMAYGSNLVRNPNGNPDHDLDKLGASKLAKPMPAAHPEGITSAIRLGNVRDTYFGWMLDSFRGHTFRISGWAYRKAGSATSSFGIHWTDTGNGNHWQAIANAAANASGWTYVSGSYTVPSNAKTARLWMQVDRDTTTASDADWYWTGLQCTDETAARSYVDTFEGEITQTYIFDKLTNNGQQQGLYLSNGLLYVNATYMRTGTITGKRSYWNLDTGQFAMTDANNNETVHFDGNGTNNLLTGTFQTARTGKRVKISPDFSSYTIGGTETYEGSGISFPLDGAYASSPSIWSYSKSSKSGDMSGIALLSGYRTKGTPAAFGRFWSRKYPDDTSKIESQAYFTSNTEYSSDSTTDSGGSLNIYSRQGYGGEATLNAWSPSATCLAGVNATGRKARAYATAADSNGEVGMLADISTGYLYLGGYLGGLTGRSTFHGAWWENVRIAAMQYSQFTFTTAAPAKYGSYKAVATVDHRGDDWALIWSTVSDCTASGWLIWVSTGPAQVVTNVTSHWNYNTSTGVVSNLSINVNNSNLFNGTKTYCLNTIGFLKK
>NZ_CP021553.1|WP_106641918.1|437935_438538_+|transcriptional-regulator
MQITTINGQPTLLIDRPLTTADTTPPAEVTDGMTTIATTPPTPYMRHDAIPLAAIASWRILLGIETDTEAVAAILHVRSNGEPDPDPDTGETAWTSAYNAIENVINAHTTTALADNTPDDQLTAGRNKTRGLLGLPPLPSAATTIASADETDTPTTIALPDGVESTELGNLLADHADDIANATDRFIDSLTRTDNGKEHD
>NZ_CP021553.1|WP_106641919.1|438688_439411_+|hypothetical-protein
MATLDSFREATGEPIQLDLANGYIADIRLNAGDNNGRTITVELTDNGTPITSTDGITCALAYNTAPGSGLGDRVSMPAVFGTTTATYRVAVPRKALQRAGAILMGIEVSVNGTKTCSRNFHGIVERAVFDATAPDAQDQMGVLDKLIDDATTAINKAVSAAGEAKDAADAARTSVIEYRQLSDDCKAKIAASAAAGVVFATQADIDAQYDSVIAPALSDAETIPPLTQSDIDWALDIINR
>NZ_CP021553.1|WP_106641920.1|439427_441008_+|hypothetical-protein
MANTQKVMTLADTAQLIAKVHANAAKGVRFEYDGTKGEYGNIASYYLAHKDGKVYGVKFPKYTYSNTPTGVKTRDNANLTIEISTNDNAGRDDYAPLNAFRVWDVNATIGDDGVPHVTAIDGIDTRFRRDGTNGDVYVMTCPGYYKLEATSTHNEFLYSDTQYDGYTPLPGVLLPDGSKRPCLLFAKYAASLDSSLRPLSVSGVEIDREFGSQNRAIDYALKKGKGYAGRCQGDTFYVQLMLMLKYATKNSDVLGGCWQYTPQTAVTKAETGVKRVIIATSAASGFDIGSTVNVGTDKERNNVGNYSAARARTILSKTNLDANNTALNLDGDAITTTTACFVSSMPWKTGATDKLLGTDGRPSAAFAANHQPIRLQGIELFNGVYESDADLIVNAVKESDDKGRLDIYRVFDITNASKTSTTNYTKIGEFTARDKTTDNSWRYAEDFTLSNGVIIPTGLGATSTTGMCDAIGANPLTSQGLRQVLRFGTLGDGVLFGAFAANLWIALASRGWLIGGRLSALGRTKA
>NZ_CP021553.1|WP_015512449.1|441422_442658_+|Reverse-transcriptase-(RNA-dependent-DNA-polymerase)
MFVRRAIDHYLKGKRSRRDVTRFLETHPDLDRLAERIADEIREGRYRDTRITYFNRVEPISGKHRVIGRESVRHQIYDHVAVMALQPLFDAKVGRWQTASIPNRGTIDARRAIKRWTRERSSKWFVKLDVRKYYPSIDRPTLKAMLTRDVGDPILLRLVFHLIDRYQGDNGLNIGSYLSQWLANYYLSHAYHWIESPAMTIERTSRRTGEITRRRLITHQLWYMDDLLLIGTSKRDLKIAARRIVRYLKDALKLDVHEEWNCKRLDLEPIDMVGYTFRPHGRVNIRSGVFLRARRTFNRARRRPMTEQLARRCCSYYGYLRNSDSIRYRRRHRIDHTMRRATRYLSTQHRKENPCSRPYPASNPSKRSATTRAATASRTSASAATSPPSCTGTAKPHGRNTPPTKPTRSAT
>NZ_CP021553.1|WP_015512448.1|442588_442819_+|hypothetical-protein
MHGDGETAWTEYTADEAYTIRDLTEQEAIEQADSIWLDCVQASKSDSQRLAGLEASSLDQDEALAEIYQLLSGGEA
>NZ_CP021553.1|WP_106641921.1|442946_443270_+|hypothetical-protein
MNPIAQQLVIWAATGIITSMGGYMFGWWRGYRRKSDAMQTGVRVLLLCKLEQMQREMVANDGIADNTAKRTAQLVYDSYHSLGGNGHGTQVNQDIQDAPIAPRKPQA
>NZ_CP021553.1|WP_106641922.1|443330_444563_+|LysM-peptidoglycan-binding-domain-containing-protein
MGRFKNRSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQAANVTCTASYDFAVVKVSQGVGFENGSWRAQAKCVTDRGKSLGLYHYAGGNDASSEADYFVAKARDYVGRAVLVLDWESYQNAQWGNSDWVRRFVQRIHTLTGVWPMVYVQASALGQIPGDVRANCGLWVAQYASNAPTGYQNRPWNYSIYGEAMRQYTSNGWISGYNGPLDLNYFRGDAGQWQAYANPAGAAKPATPPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLAGVATVAPQQAAQANTTRVAVRSGDTMSGIASRTGLWPLSRWSVPSGNINRIWPGQVVTYNGGGSVATGSNAPPSRTVTVRAGDTLSGIAARLGIGYTQLTGYRSGNPNVIYPGEVLHY
>NZ_CP021553.1|WP_106641923.1|444647_444914_+|holin
MTDENTELKTAGTEPTVPDWLLPNRAYDVLKWLALIVLPAIGVLVQTLGPVWGWTWADPAATTINAVALTIGVVIGASTLKAKASKAE

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Crispr_ID: NZ_CP021553_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021553_3

1302510-1302688

Orphan

Consensus_repeat	Method
CCGGTTTTCGGGTCGATGGTGGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021553_3

>merge|NZ_CP021553|3|1302510-1302688|CRISPRCasFinder
CCGGTTTTCGAGTCGATGGTCCAGCCGTTCGCTTCGGCCACCTTGGCCAGCATGTCGCTGTTGTCCCCCTGCAGCAACCCGGTTTTCGGGTCGATGGTGGCACCTGCGGCGATGGCCATCGCATAATCGAACTGGGTCTTGTCCAGATCGAGTTTGCCGGTTTTCGGGTCGATGGTGGC

>NZ_CP021553|3|2|1302510-1302688|CRISPRCasFinder
CCGGTTTTCGAGTCGATGGTCCA	GCCGTTCGCTTCGGCCACCTTGGCCAGCATGTCGCTGTTGTCCCCCTGCAGCAAC
CCGGTTTTCGGGTCGATGGTGGC	ACCTGCGGCGATGGCCATCGCATAATCGAACTGGGTCTTGTCCAGATCGAGTTTG
CCGGTTTTCGGGTCGATGGTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021553.1\|WP_016462994.1\|1310306_1311467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_016462996.1\|1308794_1309652_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275180
NZ_CP021553.1\|WP_016462998.1\|1307726_1308149_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_052829192.1\|1300026_1300971_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_016463003.1\|1305278_1305575_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_077149488.1\|1294388_1294826_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377400
NZ_CP021553.1\|WP_052829189.1\|1306316_1306850_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_052829195.1\|1295259_1295556_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_052829194.1\|1295574_1298808_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP021553.1\|WP_016463000.1\|1306922_1307339_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_016462995.1\|1309668_1310283_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_003829351.1\|1291133_1292279_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237654
NZ_CP021553.1\|WP_016462997.1\|1308145_1308730_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_016463002.1\|1305646_1306141_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_052829193.1\|1298818_1300027_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_157826308.1\|1292754_1293624_+\|S49-family-peptidase	unknown	unknown	gnl\|CDD\|223689
NZ_CP021553.1\|WP_143246996.1\|1292538_1292730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_060618564.1\|1293702_1294392_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_143247959.1\|1294861_1295230_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106622479.1\|1307335_1307725_-\|hypothetical-protein	unknown	unknown	unknown

>NZ_CP021553.1|WP_052829192.1|1300026_1300971_-|hypothetical-protein
MATTALGIAPDSSGAGVTPLTHRQIIRAHWANTGIVSGLDVSGRGDLTYSVGAGMAVCSRGDADGYTEAYWAGGQTPAVSATGSQPRIDCIWIRANDPTQGDADNHVVIGVTQGNASATPSVPGVPAGATRIGIRLMPASATSTSGSTMYQSATYAVPSGASLGRLAIARSTADYPIPEDRDPAGKMVYHQLLRIDFAVPTKRLVTVEWKASATVPSGSGDDANKPMGSYFMQIRLDAKVINDTPTTNPTVVGPCDEIMATRYSAPYTVSYDAEVNAGAHQVAVWVAGNADGLTYPVTIHGIHQLRVIDSGVAD
>NZ_CP021553.1|WP_052829193.1|1298818_1300027_-|hypothetical-protein
MSWRAYIADTITGQLIAPIDIPSFAWSISVSDSTLSTTKDKGAGEYDASGLTLPWTSVPGSTPAERVAMLAQDKRSIVLFWKTSLDPQDLGTPILMGSISPRTDSWQDTSFTLNSVMELLDSRILVRENTYGRAANSTTSDEFALHGSWRGIAAQVGYMCTDMKPGGRLPIDWNNRGESGNHSMDFKGFDAGNQSCRQILESIANTENGIDMQFRPYLAGNTVRFSFQAASDGDVHLGQSTVHRLYCRRYGGDLENVTIDHIGPVMRVYAAGAGSDKAQLGYLAEDLSLCLQSDPWPLREMTLSNTDTDKAEQLAASARGNLNANRLPLMQIKGEVNVNDHDSTGLPVNPLGSFWPGERMEIALDGFPGMNDGIYQTRLMQMSGDETAQVKLTFDVMTDPIR
>NZ_CP021553.1|WP_052829194.1|1295574_1298808_-|hypothetical-protein
MAVHTEIVPSGDPALGIGLEALRLARMRMTSNAGSSYWPMGDGTGILAGQQAGDQGLVLVDQHGNRMPLIDTTEISQKADDAMSKANAAVDGMEQVREDAENGVKEAKDAASTAQSTAASAASKADKLATELDGTKAIVERHTTRLGEVETKVSNSVEHADQALSASTQAMQTANSVKTTADRAYDDARSALTQSSTAVQTAGEVKTTLETNYLSKKDSDAAYASKSELKQTSDGITSTVEKTYATKSALEALRNIADNAVETWTGSQKPTASSAPASTWATDQLRKQHAGDVYYDLTSGYSYRWGSTDGKTYAWSLIKDSDITKAIADAAKAQSTANGAQKGVDRLDADIPVTYSTKSELRQTSESLTAKVTEAQRVGQSALDKASTVEQTADGLKATVSEQARTIEGQTTTIGQLTAKADSLTSSLTQTNRNVNIALANSAELIRNPECNSTLGNPDGWDGGMTLSASGAPEGAPVPTYGKFSARDTTTSFRVLRRGRTYRFSAWMAHDSTAKKPAALGCFYHESNGNGRWDAAFRVPTSQSGWKQWSGDLTIPKDAREDAIVWLQIAGALNTAEVTGWYCTLLSIRDVTEAKNAQDTADTAISRASTLEQSLNGFKTTVSQNYETKSDSLAKQSALEQSLNSFKSTVSSTYSTKNELDGLSAMASKTWSFWKDASTSPRRDWVRLGTLTSNGDSSSVQIDVLTGDGWNGAPYQNSRLSIMVKDSWQSSPSTSWAFGVSVLRENCQNAQVRVMALAADECEIWCYLPWQHGSGQYTISGSYKAWSNNTASQSDAPTSGTSQDVAYRLNAEQLRSDVESTYATKSSVEQTATSIKSSVSETYATKTTVQNLSTTLTQTKESLTVSIKQAQTSADTANGNAANAQSRVGSLEACIRMTSSGVRVGQIKNGSFIGYSALVSTSGSFQVIDGNGNKVSELDSGGVFSYVNGRIAWTIREEGETVTFDSNASPLKLESADLFVPRYPKYSSNNHLACPVSGQFKGATNVNGVAVITHNLGYIPTLSITPGPWDGIGEPQGKLFRPVIWDCTTTTAQIRFVRTDTNQWIDRQPVAFHWYAI
>NZ_CP021553.1|WP_052829195.1|1295259_1295556_-|hypothetical-protein
MPDKTTEPAMQVIDLRPPDDGILAQMLRLGLRFDHSDDGSSQSWIDPERQLRADFAGVDAETVVFTDLQTRLCTEVPAANLPRISDIITWQSAQGSED
>NZ_CP021553.1|WP_143247959.1|1294861_1295230_-|hypothetical-protein
MSSPLLLLAMAVIGKLWPDTLPTFSTWLYSHVDPGKLPFDSEMNAHWAQSRELGERLDRFEANQHEVQKDTIKNTLLTLMSDSTRDHSEAIRYELDKLKAINADCWVVDAAEQYLLDRVKRS
>NZ_CP021553.1|WP_077149488.1|1294388_1294826_-|hypothetical-protein
MANTAKADHKATSNMAKLTQERVKAIVLLIVQLFSVVQTGLSLAGISQLPFTSDQVSTAITGVIAVITSIYAWWRNNNITAAAVAGQRITDRVKTGAQSSLTSIDPELMPTAIQLDASGIDPDVLTLMAANAANDTDASDVEESK
>NZ_CP021553.1|WP_060618564.1|1293702_1294392_-|hypothetical-protein
MSRFDQWAASNTGAWRDLDGAYGAQCWDLFCALCVDLMGASVSDCHTARSGKWAGWAGSLYTGFPTTDWIGRHFTRIPASQPGLKGDVILWGGDANHPCTHVAILLADVRPGASPYVLAQNAGATMNARRMWETPASLGYLRPKDRSFITGTTNKENNDMNGLACIVQLNDENGLHYFDGSRLHPLKDPDDVVALNMVAKATIGHDLPALKVGNNRAPFGTRLREAVEG
>NZ_CP021553.1|WP_157826308.1|1292754_1293624_+|S49-family-peptidase
MDEVNSREQNGEESVLDHMIRERIAAFSAKRGRNVICYYSSWLQKPNRDDTGINDLDMNGFMNAVKDMDRSKGLDLVLHTPGGAVAATESVISYLHGCFGRDMVAFVPQLAMSGGTMMACVCREIYMGRQSSIGPTDPQFGGTPASGIVEEFQKAVESVRKDPGMAALWGTIIGKYPPAYIGESEKALRVSAEILSKSLKENMFAENPEKVDEVVSRLTSHADSGMHDRHFSIDTARSMGLIVKTLEDDDVIQDMVLSIHHVFMILFHQSNAVKIISSGDHAWVINASN
>NZ_CP021553.1|WP_143246996.1|1292538_1292730_+|hypothetical-protein
MDQETRMEKKLDKHEKQLLNDYRRIVPDAQWNRPSHMSARSLWEACSWNHDAGPTTASNKIGA
>NZ_CP021553.1|WP_003829351.1|1291133_1292279_+|molecular-chaperone-DnaJ
MADYYETLGIDRNASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMYDSGVDPNDPNAGAGGFSGAGFGDMGDVFSTFFGSAFGGGSQGPVPRTQPGRDALASASIDLKTAVFGGTAHVKINTFSLCQECGGSGAQGGAQPVTCPDCHGQGFMQKVVRTMLGQMMTSAPCERCEGHGTIIQNPCPSCMGHGRVRTTRNVGVTVPAGINDNARLRLANQGEVGEGGGAAGDLYIDIRIKADKQFTRDGDDLHCWIQVPMSWAVLGHDLSIDTFDGEQTVSIPAGCQPEDTVTLKGLGVTNIRNKDERGNLVAHVNVLIPTKLSESERGLIEQFAASHDSDATHVSQASRPQTGQKKGFFSKLKDALS
>NZ_CP021553.1|WP_016463003.1|1305278_1305575_-|hypothetical-protein
MERDEHRRITGYTPETEWDATEREWMLALDEYEHSLCPQCGMPISVCHDEQTPFHFTADVGICQISLMQSLKLDEWKKDHADENELKQSALTVGIKPR
>NZ_CP021553.1|WP_016463002.1|1305646_1306141_-|hypothetical-protein
MALEVKRKRVDVDLILDQEKAEKVAALGADLERAMAQHVTEGGNAAAKRIAEQIDKLRGEVKDDTVRITLEALPLSQWRQVLEANTVTENGVPKQRIEDICADAVRLMVRKTVPETPVDDLANVMTELSDGQISPIWYAIRDLNAKLIDPKDALESASRIIRRQ
>NZ_CP021553.1|WP_052829189.1|1306316_1306850_-|hypothetical-protein
MTLKLGTEIPGTSADGNITTLWVPTIKDIKAPTMAELEAGTDISNYVMLGGWSFDPSQDAVSDQRENAVQDFGAPGRKSAGDISIEVIDNTNTEHQEQNKAVTLMHEGASGYIVRRRGIATDTPLAVGQKLTVVSVICGEKQVINPDASTMIRSKIPLFAKAPGWESETAEISNPKG
>NZ_CP021553.1|WP_016463000.1|1306922_1307339_-|hypothetical-protein
MSVMDLTNAVLDLLPSMPSGVKVYRQEEPLESEMPPWIIARVSTDRHVAAETMRFTAHSALLEVRAVSTTVDSVNIWCDDMLIPALANRSPTRPSGYTVGQLTLYEDSGAYAAGLTADDTARRYQVRVLRFRFTWSRP
>NZ_CP021553.1|WP_106622479.1|1307335_1307725_-|hypothetical-protein
MTIDASELTSFGRRIAAAHAKASIAVAKAVKKGAQNVKESIQEDVAGSGNAGIRKVQVAYEMGSTGTTVYADVSPRDGGASDLANIAFFGTAKGGGTHDFYEHAETELPTLAEYVGDAADDMLIGAIGL
>NZ_CP021553.1|WP_016462998.1|1307726_1308149_-|hypothetical-protein
MNVQHILNRGRQLAESLMTDQCRVTHMGKPVTDPETGLVAPDVNTVYEGKCKVQTSGGLAAENTEGGIVEALGAVTPVWSMYVHFPYGTTGLLPGDVCELTEAADPNLKGRKLRLLNMQSEKSHATACRWNVKEVGNSNE
>NZ_CP021553.1|WP_016462997.1|1308145_1308730_-|hypothetical-protein
MDTLATIKDLDSYGIEYADEKLADKLLESVSAAVRDAAGCPITRGDYTVTIPGETSRRLDLPMRPVISVSRVLVDGEETGDWKLLGNALYRESLWSLPNMVPCSVTVTMLAGYDPVPPDIVRLVCSMVAAGLVQQSNGGPGAHRDESYARIDDVQIGYRQGDSEIIDALELPEGTKRALRNRFGMRGIAIGVFR
>NZ_CP021553.1|WP_016462996.1|1308794_1309652_-|hypothetical-protein
MAITNFIPELWSANILLELQKNLVYGSAVNRDYEGDIANYGDTVHITGIAHISIGDYTAHTDITIEPATDKDAGELVINQSKYFAFEIDDVEKRQAMNNLTAAYSRDAAYKLRDLTDQYLAGLMAAGAKSKLDPISGATATKAYDTIVDLATALDKQNVPDAGRWVIVNPDFYGLLRKDSRFVAGAESAHSTLLNGVVGEAAGMTILKSNNAPAAKGGSASAQTDEGNVIIAGTNAATTFAEQIAKVEATRKEKGFDDIVKGLHLYGAKVVRPEALATVHFKVGK
>NZ_CP021553.1|WP_016462995.1|1309668_1310283_-|hypothetical-protein
MDPANQNQQTGDNESKKPENTGGEDWQSKFEGQRKVNRDLEKKLNEAYAKADKVDELEKQIAALQGKEAEYEAARKEQAVKDEALAAANQRILKAEVRAAASGKLTDPADALRYLDLSKFTVTDDGGVDTQAIADSIGELLEQKPYLGKAEQAPSGANITPPSGTRDGDRHQGQLTRDDLKTMSPAEIVKAQQDGRLKDLLGAN
>NZ_CP021553.1|WP_016462994.1|1310306_1311467_-|hypothetical-protein
MELAADRAARRTWNRVDANNIQASWKSISRDFLTLFSTIQTKSAETAIDASGMMLAEQGVYVTPHALANPNAFAGWAPSGLDIASYFQSPVFAALHAIRTGSSPLEALEYGRNLLVMLTSLAVMDTARQAESLDITSRPKVGYIRVESATCCDRCMLLAGKWFRFNEGFLRHPHCHGRHVPCSHGMAKQQGWISDPMEGFKSLSREEQDKRFGANYAQAIRDGADIYQVVNSKRGMQRVGKGYTALTTSEGTTRYGWANMQYAQQSGRKMKRRLSIDGIYSLTGGDREKTIAALKANGYYVDNDWRGKVPEIRKSMWLHDNTYRQGRVELLTAAEKRVQTAKLRYEAVLEGRNPNDGRMPLTPEIAAQCEREYRRWVTSGGQIFQQ

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Crispr_ID: NZ_CP021553_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021553_4

2195714-2195860

Orphan

Consensus_repeat	Method
AATCTCCTAAAATCCTGTCACTAAG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP021553_4

>merge|NZ_CP021553|4|2195714-2195860|CRISPRCasFinder
TTCGTCCTAAAATTCTGTCACTGAGTCAAAGCCAATGACAGATATTTAGGAAACCAACCCCAATCTCCTAAAATCCTGTCACTAAGACTCACTTAGCGACAGTAATTTAGGACGACTGGGATAATCTCCTAAAATCCTGTCGCTAAG

>NZ_CP021553|4|3|2195714-2195860|CRISPRCasFinder
TTCGTCCTAAAATTCTGTCACTGAG	TCAAAGCCAATGACAGATATTTAGGAAACCAACCCC
AATCTCCTAAAATCCTGTCACTAAG	ACTCACTTAGCGACAGTAATTTAGGACGACTGGGAT
AATCTCCTAAAATCCTGTCGCTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021553.1\|WP_025301443.1\|2205172_2208235_-\|Rne/Rng-family-ribonuclease	unknown	unknown	gnl\|CDD\|273254
NZ_CP021553.1\|WP_003829776.1\|2204403_2204655_-\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP021553.1\|WP_019727375.1\|2198700_2199906_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP021553.1\|WP_025301439.1\|2186791_2188660_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP021553.1\|WP_003829777.1\|2202645_2204337_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237045
NZ_CP021553.1\|WP_003831622.1\|2198143_2198371_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|236066
NZ_CP021553.1\|WP_015439254.1\|2201404_2202538_-\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP021553.1\|WP_025300058.1\|2193087_2193945_+\|polyketide-synthase-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP021553.1\|WP_106622433.1\|2174033_2174258_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341042
NZ_CP021553.1\|WP_003829786.1\|2194218_2194911_-\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP021553.1\|WP_106621115.1\|2190903_2193009_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_106642106.1\|2189063_2189771_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP021553.1\|WP_003831625.1\|2195974_2196928_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021553.1\|WP_019727371.1\|2185176_2186799_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP021553.1\|WP_014484324.1\|2204677_2204986_-\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NZ_CP021553.1\|WP_106642105.1\|2175654_2185137_-\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|227315
NZ_CP021553.1\|WP_003829782.1\|2197283_2198111_-\|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP021553.1\|WP_106621114.1\|2189772_2190732_-\|biotin--acetyl-CoA-carboxylase-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP021553.1\|WP_025301442.1\|2200046_2201309_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213024
NZ_CP021553.1\|WP_003829785.1\|2194926_2195358_-\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661

Protein	Function_ID	Function_description	E-value
NZ_CP021553.1\|WP_025301443.1\|2205172_2208235_-\|Rne/Rng-family-ribonuclease	gnl\|CDD\|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	3.03541e-152
NZ_CP021553.1\|WP_003829785.1\|2194926_2195358_-\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	8.69761e-91
NZ_CP021553.1\|WP_025301439.1\|2186791_2188660_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP021553.1\|WP_003829777.1\|2202645_2204337_-\|GTPase-ObgE	gnl\|CDD\|237045	PRK12296, obgE, GTPase CgtA; Reviewed.	0
NZ_CP021553.1\|WP_019727375.1\|2198700_2199906_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP021553.1\|WP_014484324.1\|2204677_2204986_-\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	4.17736e-35
NZ_CP021553.1\|WP_025300058.1\|2193087_2193945_+\|polyketide-synthase-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.77745e-16
NZ_CP021553.1\|WP_106622433.1\|2174033_2174258_-\|hypothetical-protein	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00284365
NZ_CP021553.1\|WP_003829786.1\|2194218_2194911_-\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.72993e-143
NZ_CP021553.1\|WP_106642106.1\|2189063_2189771_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	7.76791e-31
NZ_CP021553.1\|WP_003829776.1\|2204403_2204655_-\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	5.68869e-49
NZ_CP021553.1\|WP_019727371.1\|2185176_2186799_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP021553.1\|WP_015439254.1\|2201404_2202538_-\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	1.3328e-175
NZ_CP021553.1\|WP_106642105.1\|2175654_2185137_-\|type-I-polyketide-synthase	gnl\|CDD\|227315	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein].	0
NZ_CP021553.1\|WP_003829782.1\|2197283_2198111_-\|transcription-termination/antitermination-factor-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.58026e-66
NZ_CP021553.1\|WP_106621114.1\|2189772_2190732_-\|biotin--acetyl-CoA-carboxylase-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	1.28027e-32
NZ_CP021553.1\|WP_025301442.1\|2200046_2201309_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213024	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins. This family contains an uncharacterized protein yadE from Escherichia coli and its bacterial homologs. Although its molecular function remains unknown, yadE shows high sequence similarity with the catalytic NodB homology domain of outer membrane lipoprotein PgaB and the surface-attached protein intercellular adhesion protein IcaB. Both PgaB and IcaB are essential in bacterial biofilm formation.	1.0321e-60
NZ_CP021553.1\|WP_003831622.1\|2198143_2198371_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|236066	PRK07597, secE, preprotein translocase subunit SecE; Reviewed.	4.48776e-12

>NZ_CP021553.1|WP_003829785.1|2194926_2195358_-|50S-ribosomal-protein-L11
MAPKKKVSALIKLQIQAGKANPAPPLGPALGSHGVNIMDFCKAYNAQTQDKMGQVIPVEITVYEDRSFTFVLKTPPAAALLKKAAGIEKGTENPLTHKVGSVTKAQVREIAETKMEDLSARDIEAGMKIIEGTARSMGITVTD
>NZ_CP021553.1|WP_003829786.1|2194218_2194911_-|50S-ribosomal-protein-L1
MVKRSKKYREAAERVDRNNLYTANEAIALLKSMPSYNFDQTVEAVFRLSVDPRKADQLVRGTVNLPHGTGKTAKVLVFARGPKATEATEAGADIVGDDDLIAKVQGGFLDFDAVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKNGNLSFLIGKMSFDESALDENFKAVADEVKRLKPSTVKGRYLTKATITSTMNPGVPVDPNTLA
>NZ_CP021553.1|WP_025300058.1|2193087_2193945_+|polyketide-synthase-regulator
MSDFLELLAADAANSSDFTDRSGISATDRARTVLFECLFNHLADDRVASLFTILGFEHDFTCYAIAGYPARSAARSRVDIEKIVADFGGTCLTAERPITGLTGADNGTGRTAVVALIRPVGAATPEIICNTIAPAFDADRPIALGSQRTGAEGAMRSVQATLYCLRAAPALAATAQSLPRPLRTDDALPERALIGDEDARDELIRVVYGSLTAAGPDDPTLLTVSTFLKYGGSLETCAKELNVHPNTIRYRLKRAAESTGWDATDPREAYVLITAIALGRMATAQ
>NZ_CP021553.1|WP_106621115.1|2190903_2193009_+|hypothetical-protein
MTSPASSLPAAAAHPRLARVGAAARWTLAVLACLWLALCTAVGPLYWDFENGTIANWNWTNTAFFVLSFAIYLGLIVIMVRFAAGQRVLPRAISGRLSRAGQQHSNQALEPSQSQSVVADSNVSKRHATVASRFATLGRWITRGTNRFWKLALVFFIGWLWVPTTLLAAFGADIRSQIREFSWAWNQWTGLQQPYIGFFSFVPMDIYPTAHYMWPPDPTYLTDQHNVVLTVFYGAVAAFSRYLTGSNDAGIVALAAGQMLLAVFCCAATANRFLNRPWMGVAQSTKDKNGSSTSTGNVSSTTSARIAQDSAPQLAGGRARFLILVFFLCCPLAVFATISITKSPLFAFSFVWWFGIWYELTQTWKPTGKRKGLTATVPIRLPRHSFVAFVLSTAVMLISAKYAWYIIALQIVLALIADRRRWTTYVVALLIPTMLIHGGISLAISSGAIIGGDPIESRGVQLQMIARVASRNPEGISEEAKKNLSDVFNLDQMADAYSQQDADPVKSSGIQAKKVSYKWRTVTPEDMTNFNKAWFEIVKDNPVIALDALLAKCFGYFNVTDQPYVSMDYYVTSDYVQKNSTWIKSYNHNWRERITGFTRSWGKIPVIGWITHGNFYVVMTLLIGAAEVIRRRWLTLMTHIPLLLLMGVMITAPANNFERHMLPVAFVFGFVVLTYWRESLAERRIARQAQSSASTTMTLPQ
>NZ_CP021553.1|WP_106621114.1|2189772_2190732_-|biotin--acetyl-CoA-carboxylase-ligase
MGGSVRFFARHRESGRANRGNVVPMMIALQAATPQLPRTKAVADQVVAVGETDSTNALAARMIGDGSLTLPERKDGTLAVGVVAADRQSAGRGRNGHTWISQPGRCSTMSYAVRIPRAIATDESVNGWLQMIAGLVTLDALNGMIKEYGAAPNKQDCFLELKWPNDVFCHGLKLGGLLSELVLLPDGESGDDVVVVFGVGLNLDLGASRLPTPQSTSLQLHVSGLPSFNEMRDAVAEREVEGFRERLAAFIADPHGQAEALREEMKAVCWARGRQVEAHFTDGTTLIGEAIGLNEDASLILRTEDGTDHTVRTADVGVL
>NZ_CP021553.1|WP_106642106.1|2189063_2189771_+|biotin-transporter-BioY
MWTANAHQGHIRPRHSHSIAYRLPVTAIAHNIGVFIMQTSHTTSSTAATASLGRRIVAASWKPALFAVLMWLSAAAGAIPIPGTPVPITLQTFVVMLAGLMLPWRQAGSAVAAYLAAGAVGLPVFAGGASTMALVGPSAGFLFGFLPGVIVIALLRGKANTSSASAAALTAGRYLLTALVGGVVVVYALGFVIQSALTGVPIAAVALASMGFVAGDAIKAVVASLAAAGLSKLGR
>NZ_CP021553.1|WP_025301439.1|2186791_2188660_-|ATP-grasp-domain-containing-protein
MAHTVKKLLIANRGEIALRVVRTAKEMGISTVAVYSEQDRNSRYVDMADEAYLLSGDTYKDTYLNEDLLIDILHKTGADAVHPGYGFLSEVPSFAQKVEDAGAIWVGPHHTALVELGDKITARRVALRAKVPPVPGLSEPVTDVRTLLDFAHTHGYPIMMKRTDGGGGHGITVVHDDEELRRFYMNHDALQGGDLKEYFIEKFVDKARHVETQSGRDSHGNFTVYSTRDCSLQRRNQKLVEEAPAPFLPEEIVSTLEEYSRRLFTTVGYVGLGTCEFMVTPNGKVYFLEVNPRLQVEHTVSEEVSGLDLVREQLNIAAGGELTRAPELRGHSFELRITSEDPVTNLTPGSGTLEKIQWPAGPGVRIDTGVEQGDTISPKFDSMMGKVIVTAQNRLDAVARVRRVLDELVIEGVPTPIPLFKEIFRNDDFTAENGHPFSVSTKWLERTYLNRTPASASSGQPASLAGAAAPAAPDKSTSETFVIEMNNRRVKLTVPLDIVENITGSARARGAKRPTQPLRGAGLHNVASGAAKANDGAKSGVIASPMQAVVTRINVSEGQQVAKGDLLVVLESMKMENYVYAPAAGEVKKIFVGPADGVEAGDTLVTLDVAKAEDSKKEGGND
>NZ_CP021553.1|WP_019727371.1|2185176_2186799_-|acyl-CoA-carboxylase-subunit-beta
MTDIMDSPAVKAVTAASATNASQPPAHQPLRAAVVKAAELARAAEERARDKQHAKGKKTARERLDLLFDTGTFEEIGRFQGGNIAGGNAGAAVITGFGQVYGRKVAVYAQDFSVKGGTLGTAEGEKICRLMDMAIDLKVPIVAIVDSGGARIQEGVAALTQYGRIFRKTCEASGFVPQLSLILGPCAGGAVYCPALTDLIIMTRENSNMFVTGPDVVKASTGETISMADLGGGEVHNRVSGVAHYLGEDESDAIDYARTVLAYLPSNSESKPPVYAYAATRAERETAKRLATIVPANERQPYDMLEVIRCIVDYGEFVQVQELFGASALVGFACIDGKPVGIVANQPNVLAGILDVDSSEKVARFVRLCDAFNLPVVTLVDVPGYKPGSDQEHAGIIRRGAKVIYAYANAQVPMVTVVLRKAFGGAYIVMGSKAIGADLNFAWPSSQIAVLGAAGAVNIIHRHDLAKAKASGQDVDALRAKYIKEYETSTVNANLSLEIGQIDGMIDPEQTREVIVESLATLATKRRIKRTTKHHGNQPL
>NZ_CP021553.1|WP_106642105.1|2175654_2185137_-|type-I-polyketide-synthase
MSTFFLNRLTTEPHALAFAGQSTPWPVALADQTTDPSLDEALRGHVAAANRLLAPAAADLLATTGRPVDLFGFTPNPARLSAAADATASVEGVALTQLGALLDLEHLGYSVAAAKPVAVLGHSQGVLAVHMTRAIEAAGSIEAAGKTLDEILAVAALIGAAGTRRVRELGLNPKYGEASPMLSVKGATREQVEALVKRVNNARGPISIAVTNSDNHHVLSGHPEDLAALALETEREHKHQAKLREQKLHGGTVFNPTLEYLEVTLPFHSPLMAEAVEQTVSWAGACGFDQDRTRALAEEVLLNHVDWNARVKALFNAADPAKLWIVDLGPGNTLGKLIGNVVQGTGIGVVEATTLSERSALSTLESEPERTQNWKALAPRVIETPAGAKLVTKFSKLTGKPPVLLPGMTPTTVEPEIVAAAANAGYWAELAGGGQVTAEVFDRHIAALEDELEEGRTVEFNAMFMDRYLWNLQFGSSRIVPKKRASGAPIDGVVVSAGIPELDEAVELIKNLQADGLPYVSFKPGTVDQIRQVVRIAKAVAPTTIMIQVEGGEAGGHHSWEALDDLLAATYAEVRACDNLVLVAGGGIGTPERAADYISGQWAHAYGLPDMPVDGVLIGTAAMTAKEAHTSPEVKQMLVKTPGIPADAKSDDVFAPQAAHWVPSGKSVGGMSSGLSHLHADIYELENDSAECGRLLVRVMKHPEELDSRRKEIIEALNKTAKPYFGDLASMTYLEWAQRFAELAFPWADPTYADRFQHLLQRIEARANDTDSGEFTSKLFAADGVSADEAAAAGLLTRDGILADPAPALEKLALAYPQTAELKVVPADVAWFPVLVREYPKPMPFVPVIDNDLLRWWGQDQLWQSEDQRYSADSVRAIPGPISVAGITTVDEPIADILGHFENAAIERVKAEQNAAENNDFAALGEAVSAEDFIRKSPNISWVGHITDNPAYGTALGDQYYEIRAFDAAAGKYDLDIHLDTYWDNDPDGGTSKHAVRDIVIPLIVEGTELGRVPVVDRERLIPDVYAMLAATAGIGNTAITGDKLTAMPTLSVPSDEGAVTANAVTEGETAQNRPFGTATATYTLSANLGFDHEAATGAALPSTLQPSRIAPDALVGPAWPAIYTALGSVYVKGYPVIEGLLNAVHLDHLIELEVNEEDLLKHTGETITLKSWAEDYFESASGRVVTIHVTHTAADGTLLARETERFAIRGRVYSDALPADAPEFGDAEHAEVAPTPRRLLRRVKVVAPHDMTAFARTSGDFNPIHTSTRGARISGLAAPLVHGMWLSATAQHAVQALDEKGAHYEIAGWTYNMYGMVQLDDTVEISVERVGKVRHGGMTLEVTCRIDGQLVSRGTALVRAPRAAFVYPGQGIQKQGMVLDERAKSAAARDVWERADKLTRAKLGFSILGLVRDNPKELTANGVTYRHPEGLLNLTQFTQVALATVAFAQTARLREAGADIWPAYFAGHSLGEYNALSAFADVIPLETVLELVFHRGSTMHHLIERDAQGRSNYRMGALRPNQFGVDDAHVKEYVESVAKASGEFLEIVNYNLAGQQYAIAGTIAGLKALKADSARRVAAFGGKPAFMLVPGIDVPFHSTLLRKGVPEFRDKLDALLPAYIDYRGRLVDRYIPNLVASPFEMTKEFAAKILEVVPSERIKAALDDPAVWDSYAADDQKLGRLLLTELLSWQFASPVRWIETQALLFGKREQGGLGVEEYVEVGLGNAPTLANLGAKTLRLPEFAGNDTVVYNVGRDEGRVYMTDTDSLVPDDEPEETAAPVETAPAGGSAVAKLGSSAAADAAPAAAAAPAPAAPVFAAPAGTPSGAAVADLPFKASDGIGVLMAYAAKVRLDQIGSNDTTDTLTNGVSSRRNQLLMDISSELGVASVDGAAEATLDKLAQIVNKAAPNYKPFGAVLSEALRDRLRSLFGAAGVKQQYIRDRVANVWQLGEGWVASVLAALLLDTREGSSSRGGDLAKLPTAAVQNKPEADKLIDAAVEVVAQLKGVAVALPSAGGAAGGAVVDSAALDAFAEKVTGSNGVLAATARFVLNELGVAAPAPEESEDENAAVVAAVEAELGSDWPKQVAPRFDANKAILFDDRWASAREDLARAYYDNDPAALNGSFIGLGKTIAAEAQWFADKSDNDELKAAFQKAASEALESVTSDKNASRYANDIAIVTGVSPNSIAAQVVEGLLAGGATVVATSHSFKPSIKAWAKQAYREHATGNAKLWLVPANLSSYRDVDALVDWVGHEQKKTSGATTTILKPAWEPTLFFPFAAPPVHGTLADSGDLFESQARLMLWGVERAIAGFSHIGADTNVQHKLHVVLPGSPNRGVFGGDGAYGEVKSAFDAIVNRARAEKVWSSRVTFAHPKIGWVRGTGLMGGNDPLVAVVERHGIHTYSTAQIAAKLLDLCTAESREQALKAPLDVDLTGGLGSEPIDIKALRAEAMADAEKESSSEKAAIEGEKPEGGAAGSTLKALPTPIVTKQAPVDLADWQNVTARPEDEIVIVSVGELGPWGSGRTRAQAELGIHSDGTVDLSAGAVLELAWNMGLLTWADSPKPGWYDTDGNLVPEEDIAERYHDEVVARSGIRPFEEGMGDDYKDGADEEEAEVFLDHDVTFSVPTRDVAAEYVKLDEAHTTIAPDEESGEWNVTRHAGSMIRVPRRAAMTRTVGGQFPKGFDPTRWGIPASMVGDVDKIALWNIVTTVDAYLGAGFTPAEILESIHPSLVASTQGTGFGGMMSMRKLYLDRFLNHEIPTDILQEALPNVVAAHVMQSYIGGYGNMIQPVSACATAAVSLEEGVDKIALGKADFVVTGAIDDIGVESVIGFGNMNATANSEEMYGKGIDARFFSRANDRRRGGFLESQGGGTILVTRGDIAEKLGLPVVAVVGFIHSYADGAHTSIPAPGLGALAAGLGGKDSKLVRDLAKLGVSADDIAVVSKHDTSTNANDPNESELHNTLAHAIGRTDGNPLFVISQKTLTGHAKGGACIFQVNGLTQLFKSGVIPANVSLDCVDPKLQRDDHMVWVRKPLRIGGGEDEFGRETAGRPVKAGLATSLGFGHVSGFVALVHPGAFEAAVAKADGEAALEAWRERANARLVAGQRHLEEGMMGRAALYEPIDNRRFHEDHRGYDHHEVEKAMLLNSDARLGADGYYEA
>NZ_CP021553.1|WP_106622433.1|2174033_2174258_-|hypothetical-protein
MANVAFGHLFVCSGIANSTYYAGIDLGMSLGPIVGGLLYGNAPIQWFYPLSMLAMPAAWLLYAATANYVHGRTR
>NZ_CP021553.1|WP_003831625.1|2195974_2196928_+|hypothetical-protein
MKTHKEVAALLQTAQREQRCAIGDGGKLYTALRRRTKIGEVVSPYPNLFAATSYWKSLNVEQQSMHLIRALAKVHPTWTFAGLSAACVYQYEHSYSLHNGTVDIVSPKGANCGGASGLNRIYMARCSQYRCQGILVTSPARTLIDCASLPFDKALAIYDSALRLQHVTKLDVETLIVQTDCNETNVKRLLRYANPLRENGGESWTYARIRQLGFAEPLFQTEFDNPANPEMPYRVDFCWKLHDGRIIVVEYDGIAKYRDTSNPNRANLMAKFEYERQRDTNLKTQGVTSIKHLFYEDVSDLKRLNALLTAIGIPKIR
>NZ_CP021553.1|WP_003829782.1|2197283_2198111_-|transcription-termination/antitermination-factor-NusG
MSDELNLENLDAALENVDAAADEAPVADAPAEAVESAEPVAEAPVASPETVAESAEEESEVNESEQAEETDAGQKAVDEFSKSLRTLDGKWYVLHTYSGYEKRVKTNIESRVASFGMEDQIFQVEVPMEEVEKHTEKGKKVITRVRVPGYVLIRMWPDENARRVVRETEGVTGFVGPSKDPAPLSRQEVVAMMAPMIASEALKAAGDKPAAAKKRKVEVSYAVGDQVTVTDGPFATMAAVVSDVEPTTQKLTVLVSIFGRDTPVELGFHQVQKLD
>NZ_CP021553.1|WP_003831622.1|2198143_2198371_-|preprotein-translocase-subunit-SecE
MAKTSTNEKAVKPNVFMRIGLFIKQIIDELRKVVTPTAKELFFWSLAVFIFVLLLMALVTGMDFGLGKATLGIFG
>NZ_CP021553.1|WP_019727375.1|2198700_2199906_-|pyridoxal-phosphate-dependent-aminotransferase
MAQWQILSDRINTVAPSATLAVDSKAKAMKAAGLDVIGFGAGEPNFPTPANVVKAAADACLDPKNYKYTPTPGLPELREAIAAKVLRDSGYEVSADQVVVTNGGKQAVYEAFQILLNDGDEVIIPTPYWTSYPEAVKLADGVPVEVFAGADVNFEPSLEALEAARTERTKAIIVNSPNNPTGAVWKPETVEAIGCWAVEHHIWIISDEIYEHLNYDDARTTYIGAAVPECRDQLLVLNGVAKTYAMPGWRVGWMVAPAEVAKAATKLQGHMTSNVANISQRAALAAVSGPLDEVYEMRKAFDVRRRAIVAALNDIEGVYCPTPTGAFYAFADITALLGKPLGSNGTVCATSADFAAALLDEAHVAAVPGEAFGAPGYLRFSYALADDDLAEGMKRFKDWAK
>NZ_CP021553.1|WP_025301442.1|2200046_2201309_+|polysaccharide-deacetylase-family-protein
MAKHHESHGSRGTRRSTVEPRVAYSRHAETHSAHGSQLHYGQHASHRSAAAIAAQRTRRIAVLVVAAVVAVALVITVGVVAHGWFVRQSAPSMQQQLPTTAHKSLTRKTVPQLDPGNIVIGVNGSETTYVLKGEQYVEGGAHAIEPEDGVLTGNIVTTGTVDTNTPGDYTVQYTVHDSTGHEASATRTVKVVDTMDKQTGGIPVLMYHYVYDPANPPADVDANWIPTTSFEPQLQYLTQNNFYYPSWPEVRAFIDGKHSLPKNSIVMTFDDGEPHFFQYGSPLLAKYKVPATSFVIGADGEALNKMKTYATPYLEYESHSFDMHRAGGTVGHGGRISAMSHQEIVDDLKQSEQVTGSLQAFAYPFGDTTPDAIEAVRETGTLAAFTTQYGWADVGADPMNLPRVRIQGTGSLATFIAAIQ
>NZ_CP021553.1|WP_015439254.1|2201404_2202538_-|glutamate-5-kinase
MSTPSQAEVRRMIAAAGTIVVKVGSSSLTQPSGHLDPDKLDALTAALAQVRLMGARVVLVSSGAIAAGFGPLGFDERPADVATQQATAAVGQGLLMARYEAAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIRFGDNDRLSALVANLVRAEALVLLTDVDALYTAPPAQPGSRRVEYVPNVIDALGDIQVSGSGSKVGTGGMVTKLEAARVAAVSGIPTVLTCASNAGPAMMGDPVGTVFAPVKARGSSRRLWIGFAAEPRGTIVVDAGAAKAIRGGRASLLAAGALDVHGDFSAGDPVWIDDESGTHLARGLAGFDSEEIPQTLGRNTAQLKRFLGDQYAHPLVHRDNLVLV
>NZ_CP021553.1|WP_003829777.1|2202645_2204337_-|GTPase-ObgE
MSDFVDRVTVHVRGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFMPHRTAGNGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKTKHPGEQLADLRHEGDRVVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSSLIAAMSAAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHIERTEIIAHVIDCATLEPDRDPMSDYQALENELALYADKLELPLGAIPIPERPRIVILNKIDVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALAELVHEMREEVASREEAEEEARVVIKPLERTGRRPRRADEGGNALDFTVERRELGNGEVFYEVRGAKPERWVMQTNFDNDEAVGYLADRLAKLGVEDELRRKGARPGDEIRIGRGDRMVEFDWDPTISAGAEMLDGSNLGARGKDLRLEEQDPRAHRRSNAERRAQYHEMMDARAAVRDAMMAERKAGHWADPTVDDDRHDETSLFGHGESADDSASEE
>NZ_CP021553.1|WP_003829776.1|2204403_2204655_-|50S-ribosomal-protein-L27
MAHKKGASSSRNGRDSSPQYLGVKKFGGEAVVAGNIIVRQRGTNFHAGQNVGMGKDHTLFALADGSVKFGVRRDRKVVDVIAA
>NZ_CP021553.1|WP_014484324.1|2204677_2204986_-|50S-ribosomal-protein-L21
MYAIVKAGGHQEKVEVGDTILVNRLDAKKGDTVEFPVALLVDGAKVTLAAADLAKVSVKAEVVNDEAKGPKINIQKYKNKTGVARRKGHRQPLTIVKITAIA
>NZ_CP021553.1|WP_025301443.1|2205172_2208235_-|Rne/Rng-family-ribonuclease
MPTENREGFVGDETDNSTVSNTESQASGASEPNAEASQPTRRRRGGRRVVRGTGAAGASLELQVQEHAAPLFEAPALPDADASASAETTDNNASDDEKHPARRTRSRRSADNADYEDRSTRRRAVADDDDEPRPVRRRRAVSDDLEEDDERPIRRRRVASDDFDEDNDRLVRRRRSVIDDLEDDDAPRSSRRRTAVDDSDEDGDRPVRRRRSTTNDRDDRDDEPRSARRTRSRRSSEDAREENPDERVLDVIDALPAGHESARRGKPMTSLLFQEPVLPDMRRDDRDDEEDDGEQRSRSSRRSRAREDEADYEERPSRSRRSSRSDHGDHDDHDDRDDSRNNRRRNETQDDFDADGQSDSRRSRRSRRLNAQERRAAAEVEQIEEDLELDDITYSPIAEEENDEESDSTRTRSRRRRRRGSRNESGASNNDSESSENNGDDSRRRRDDRDERDRDDDEEQTVTRRRRRRRGGKNAESGDEQDDQQLTRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLMEQDFLARRENVDRLMVVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGASEEAIVKDLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFGKLIVEGDKVYDRIEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFILHDQPTVSADYDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAAAAVAANNTEEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP021553_4	4.1\|2195739\|36\|NZ_CP021553\|CRISPRCasFinder	2195739-2195774	36	NZ_CP021553.1	2197076-2197111	1	0.972

1. spacer 4.1|2195739|36|NZ_CP021553|CRISPRCasFinder matches to position: 2197076-2197111, mismatch: 1, identity: 0.972

tcaaagccaatgacagatatttaggaaaccaacccc	CRISPR spacer
tcaaagccaatgacagatatttaggaaatcaacccc	Protospacer
****************************.*******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP021553_1	1.4\|156562\|27\|NZ_CP021553\|CRISPRCasFinder	156562-156588	27	MK878896	Gordonia phage Begonia, complete genome	45314-45340	6	0.778
NZ_CP021553_1	1.4\|156562\|27\|NZ_CP021553\|CRISPRCasFinder	156562-156588	27	MT723942	Gordonia phage Archis, complete genome	42021-42047	6	0.778
NZ_CP021553_2	2.1\|432522\|31\|NZ_CP021553\|PILER-CR	432522-432552	31	NZ_AP022338	Mameliella alba strain KU6B plasmid pKUB257, complete sequence	221651-221681	8	0.742
NZ_CP021553_2	2.1\|432522\|31\|NZ_CP021553\|PILER-CR	432522-432552	31	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	166502-166532	9	0.71

1. spacer 1.4|156562|27|NZ_CP021553|CRISPRCasFinder matches to MK878896 (Gordonia phage Begonia, complete genome) position: , mismatch: 6, identity: 0.778

ggttgtggacggtgcggagc----ccccatg	CRISPR spacer
cgttgtggacggtgcggagcggggcgc----	Protospacer
 *******************    * *

2. spacer 1.4|156562|27|NZ_CP021553|CRISPRCasFinder matches to MT723942 (Gordonia phage Archis, complete genome) position: , mismatch: 6, identity: 0.778

ggttgtggacggtgcggagc----ccccatg	CRISPR spacer
cgttgtggacggtgcggagcggggcgc----	Protospacer
 *******************    * *

3. spacer 2.1|432522|31|NZ_CP021553|PILER-CR matches to NZ_AP022338 (Mameliella alba strain KU6B plasmid pKUB257, complete sequence) position: , mismatch: 8, identity: 0.742

acgcggtcaggtccgtcgcatccgccatctg	CRISPR spacer
cacccatcaggaccgtggcatccgccatctc	Protospacer
   * .***** **** *************

4. spacer 2.1|432522|31|NZ_CP021553|PILER-CR matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 9, identity: 0.71

acgcggtcaggtccgtcgcatccgccatctg	CRISPR spacer
ggtcggtcaggtccgccgcatacgccgggtt	Protospacer
.  ************.***** ****.  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

391198 : 427086

Gordonia_phage(11.76%)

head,terminase,integrase,capsid,portal,protease

attL 386978:386993|attR 394388:394403

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
386978:386993	attL	NA	NA	NA	NA
WP_106641887.1\|391198_392026_+\|integrase	tyrosine-type recombinase/integrase	A0A2P1CCU8	Gordonia_phage	4.6e-49	41.6
WP_106641888.1\|392130_392430_-	collagen-like protein	NA	NA	NA	NA
WP_019727756.1\|392432_392918_-	hypothetical protein	NA	NA	NA	NA
WP_019727757.1\|392925_393186_-	hypothetical protein	NA	NA	NA	NA
WP_106641889.1\|393182_394067_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_019727759.1\|394079_394349_-	hypothetical protein	NA	NA	NA	NA
WP_106641890.1\|394395_394641_+	hypothetical protein	NA	NA	NA	NA
394388:394403	attR	NA	NA	NA	NA
WP_106641891.1\|394642_395236_-	hypothetical protein	NA	NA	NA	NA
WP_106641892.1\|395232_396762_-	hypothetical protein	NA	NA	NA	NA
WP_106641893.1\|396761_398699_-	tape measure protein	A0A1P8BLF5	Lactococcus_phage	3.0e-75	41.4
WP_100199026.1\|398855_399125_-	hypothetical protein	NA	NA	NA	NA
WP_019727765.1\|399125_399509_-	hypothetical protein	A0A221J6N8	Arthrobacter_phage	2.7e-20	45.7
WP_106641894.1\|399510_399942_-	hypothetical protein	NA	NA	NA	NA
WP_019727767.1\|399958_400324_-	hypothetical protein	NA	NA	NA	NA
WP_019727768.1\|400320_400644_-	hypothetical protein	NA	NA	NA	NA
WP_025332029.1\|400643_400883_-	hypothetical protein	NA	NA	NA	NA
WP_106641895.1\|400900_402472_-\|head,protease	HK97 family phage prohead protease	I6S2W2	Marinomonas_phage	7.2e-11	35.3
WP_025332031.1\|402468_403641_-\|portal	phage portal protein	A0A2R4A099	Microbacterium_phage	4.8e-60	37.2
WP_106641896.1\|403682_405149_-	hypothetical protein	A0A0K0MWE3	Gordonia_phage	1.4e-45	31.4
WP_065454288.1\|405145_405457_-	hypothetical protein	NA	NA	NA	NA
WP_019727774.1\|405625_406399_-	HNH endonuclease	A0A1D8EX78	Mycobacterium_phage	2.8e-16	36.8
WP_025332033.1\|406385_406565_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025332034.1\|406564_406924_-	hypothetical protein	NA	NA	NA	NA
WP_025332037.1\|408487_408685_-	hypothetical protein	NA	NA	NA	NA
WP_118424817.1\|408684_408891_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_106641898.1\|408999_409350_+	hypothetical protein	NA	NA	NA	NA
WP_015512487.1\|409365_409716_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015512486.1\|409800_410067_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_106641899.1\|410063_410498_+	hypothetical protein	NA	NA	NA	NA
WP_003809996.1\|410494_410905_+	hypothetical protein	NA	NA	NA	NA
WP_106641900.1\|411002_411902_+	prohibitin family protein	A0A075LZT1	Bacillus_phage	3.2e-08	21.8
WP_010081029.1\|411913_412096_+	hypothetical protein	NA	NA	NA	NA
WP_060662000.1\|412611_412851_+	hypothetical protein	NA	NA	NA	NA
WP_016462157.1\|412847_413330_+	hypothetical protein	NA	NA	NA	NA
WP_010081025.1\|413329_413869_+	single-stranded DNA-binding protein	A6N1Y1	Microbacterium_phage	3.3e-40	68.6
WP_106641901.1\|413882_414320_+	hypothetical protein	NA	NA	NA	NA
WP_010081023.1\|414405_414627_-	hypothetical protein	NA	NA	NA	NA
WP_010081022.1\|414662_415679_+	hypothetical protein	NA	NA	NA	NA
WP_052789202.1\|415675_416074_+	hypothetical protein	I3NLB9	Bifidobacterium_phage	1.2e-18	41.2
WP_106641902.1\|416070_416715_+	ribonuclease	I3NLB8	Bifidobacterium_phage	2.6e-28	41.9
WP_106641903.1\|416711_417080_+	DUF3310 domain-containing protein	A0A0R6PH23	Moraxella_phage	4.9e-11	44.9
WP_060618790.1\|417326_417545_+	hypothetical protein	NA	NA	NA	NA
WP_069483613.1\|417541_417871_+	hypothetical protein	NA	NA	NA	NA
WP_106641904.1\|417867_418131_+	hypothetical protein	NA	NA	NA	NA
WP_106641905.1\|418127_418325_+	hypothetical protein	NA	NA	NA	NA
WP_015512471.1\|418321_418567_+	hypothetical protein	NA	NA	NA	NA
WP_010081014.1\|418570_418777_+	WhiB family transcriptional regulator	A0A0R8V0E7	Thermobifida_phage	2.2e-05	36.8
WP_106641906.1\|418798_419029_+	hypothetical protein	NA	NA	NA	NA
WP_106641907.1\|419025_419211_+	RNA polymerase subunit sigma	NA	NA	NA	NA
WP_065438894.1\|419358_420198_+	hypothetical protein	NA	NA	NA	NA
WP_010081010.1\|420600_420894_+	hypothetical protein	NA	NA	NA	NA
WP_015512469.1\|421083_421272_+	hypothetical protein	NA	NA	NA	NA
WP_101026003.1\|421255_422689_+\|terminase	terminase	V5R8Y1	Arthrobacter_phage	2.4e-85	37.6
WP_069483619.1\|422688_424212_+\|portal	phage portal protein	A0A068F3B8	Mycobacterium_phage	2.9e-57	34.0
WP_010081006.1\|424135_425491_+	hypothetical protein	A0A1D8ETG0	Propionibacterium_phage	2.7e-14	47.1
WP_010081005.1\|425601_426135_+	helicase	NA	NA	NA	NA
WP_106641908.1\|426180_427086_+\|capsid	phage major capsid protein	A0A2K9VJQ1	Propionibacterium_phage	4.5e-34	33.7

DBSCAN-SWA_2

434135 : 492544

Bifidobacterium_phage(44.44%)

integrase,transposase,tail,protease,holin

attL 434213:434229|attR 496607:496623

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106642142.1\|434135_437927_+\|tail	phage tail protein	I3NL88	Bifidobacterium_phage	1.6e-181	63.4
434213:434229	attL	NA	NA	NA	NA
WP_106641918.1\|437935_438538_+	transcriptional regulator	NA	NA	NA	NA
WP_106641919.1\|438688_439411_+	hypothetical protein	I3NL86	Bifidobacterium_phage	7.5e-40	57.5
WP_106641920.1\|439427_441008_+	hypothetical protein	NA	NA	NA	NA
WP_015512449.1\|441422_442658_+	Reverse transcriptase (RNA-dependent DNA polymerase)	D6PSR5	Lactobacillus_phage	1.0e-28	28.0
WP_015512448.1\|442588_442819_+	hypothetical protein	NA	NA	NA	NA
WP_106641921.1\|442946_443270_+	hypothetical protein	I3NL84	Bifidobacterium_phage	4.4e-16	69.8
WP_106641922.1\|443330_444563_+	LysM peptidoglycan-binding domain-containing protein	Q8LTJ6	Lactococcus_phage	1.3e-36	41.2
WP_106641923.1\|444647_444914_+\|holin	holin	C9E2L0	Enterococcus_phage	2.1e-08	50.8
WP_106641924.1\|444976_445261_-	antitoxin	NA	NA	NA	NA
WP_052789178.1\|445244_445517_-	BrnT family toxin	NA	NA	NA	NA
WP_106641925.1\|445567_446347_-\|integrase	tyrosine-type recombinase/integrase	A0A1B3B212	Gordonia_phage	1.2e-54	44.5
WP_014483418.1\|446777_447812_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_003828177.1\|448156_448966_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_003828178.1\|449063_449294_+	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_003828179.1\|449359_449878_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_003828180.1\|449912_450749_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_003828181.1\|450817_452449_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_003828182.1\|452452_453376_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_003828183.1\|453384_454857_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_016462196.1\|454856_455150_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_003828185.1\|455235_455940_+	endonuclease NucS	NA	NA	NA	NA
WP_003828186.1\|456069_457023_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_016462197.1\|457124_458363_+	hypothetical protein	NA	NA	NA	NA
WP_003828188.1\|458362_459367_+	hypothetical protein	NA	NA	NA	NA
WP_106641926.1\|459589_460561_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003831436.1\|460699_461326_-	adenylate cyclase	NA	NA	NA	NA
WP_003828192.1\|462002_462392_+	endoribonuclease L-PSP	NA	NA	NA	NA
WP_003831438.1\|462517_463471_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_003831442.1\|463663_464665_+	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_014483427.1\|464710_465898_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_106641927.1\|466162_467329_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003828197.1\|467340_468279_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_044051860.1\|468314_469187_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_106641928.1\|469183_470503_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-29	36.8
WP_003831456.1\|470919_471957_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_106641929.1\|472088_472880_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_014483435.1\|473060_474494_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_157826305.1\|474625_475150_-\|transposase	transposase	NA	NA	NA	NA
WP_003828206.1\|475211_476015_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_015438397.1\|476093_477386_-	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_019727795.1\|477458_478520_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_025262742.1\|478568_480038_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_025332048.1\|480536_481913_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_015438401.1\|481985_482897_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003828213.1\|482898_483873_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_003828214.1\|484035_485259_-	ATP-binding protein	NA	NA	NA	NA
WP_014483444.1\|485906_486572_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_095256853.1\|488210_488747_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_095256854.1\|489069_489504_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_103620009.1\|490189_490888_-	transporter	NA	NA	NA	NA
WP_106641931.1\|491302_492544_+\|integrase	site-specific integrase	I3NLE2	Bifidobacterium_phage	2.7e-69	37.8
496607:496623	attR	NA	NA	NA	NA

DBSCAN-SWA_3

506968 : 522553

Microbacterium_phage(38.46%)

head,portal,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023658619.1\|506968_507283_+	hypothetical protein	A0A1D8ETB0	Propionibacterium_phage	2.0e-29	52.8
WP_023658618.1\|507310_507661_+	hypothetical protein	NA	NA	NA	NA
WP_065457266.1\|507903_508515_+	hypothetical protein	A0A2R4A176	Microbacterium_phage	5.4e-07	50.7
WP_065457265.1\|508537_510115_+	hypothetical protein	A0A1D8ET78	Propionibacterium_phage	5.2e-179	58.0
WP_065457264.1\|510129_510354_+	hypothetical protein	NA	NA	NA	NA
WP_065457263.1\|510353_511634_+\|portal	phage portal protein	A0A222ZFM5	Arthrobacter_phage	1.4e-36	32.2
WP_065457262.1\|511630_512263_+\|head,protease	HK97 family phage prohead protease	Q9MBK0	Corynebacterium_phage	1.4e-34	46.8
WP_065457261.1\|512295_513543_+\|capsid	phage major capsid protein	W0LJX9	Mycobacterium_phage	2.5e-30	28.6
WP_065457260.1\|513542_513764_+	hypothetical protein	NA	NA	NA	NA
WP_065457259.1\|513764_514130_+	hypothetical protein	NA	NA	NA	NA
WP_065457258.1\|514145_514667_+	hypothetical protein	A0A1D8ETD3	Propionibacterium_phage	6.4e-49	54.6
WP_106641938.1\|514663_515056_+	hypothetical protein	NA	NA	NA	NA
WP_065457256.1\|515055_515346_+	hypothetical protein	NA	NA	NA	NA
WP_106641939.1\|515342_515774_+	hypothetical protein	A6N204	Microbacterium_phage	1.5e-19	37.0
WP_106641940.1\|515800_516361_+	hypothetical protein	A0A1D8ETI9	Propionibacterium_phage	1.4e-65	63.6
WP_065457275.1\|516357_516633_+	hypothetical protein	NA	NA	NA	NA
WP_065457253.1\|516731_517097_+	hypothetical protein	A0A1P8VV87	Rathayibacter_phage	2.0e-12	32.2
WP_106641941.1\|517498_520678_+	hypothetical protein	A0A2P1CJ57	Microbacterium_phage	1.1e-58	55.8
WP_106641942.1\|520680_521418_+	hypothetical protein	A6N209	Microbacterium_phage	3.5e-16	32.5
WP_106641943.1\|521422_522553_+	hypothetical protein	A6N209	Microbacterium_phage	4.9e-46	34.8

DBSCAN-SWA_4

1301923 : 1312902

Bifidobacterium_phage(77.78%)

portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052829190.1\|1301923_1305262_-\|tail	phage tail tape measure protein	I3NL90	Bifidobacterium_phage	4.5e-188	48.1
WP_016463003.1\|1305278_1305575_-	hypothetical protein	I3NL91	Bifidobacterium_phage	2.3e-35	65.3
WP_016463002.1\|1305646_1306141_-	hypothetical protein	I3NL92	Bifidobacterium_phage	4.6e-57	71.2
WP_052829189.1\|1306316_1306850_-	hypothetical protein	I3NL93	Bifidobacterium_phage	3.4e-82	87.8
WP_016463000.1\|1306922_1307339_-	hypothetical protein	I3NL94	Bifidobacterium_phage	1.0e-41	61.6
WP_106622479.1\|1307335_1307725_-	hypothetical protein	I3NL95	Bifidobacterium_phage	3.2e-37	62.3
WP_016462998.1\|1307726_1308149_-	hypothetical protein	I3NL96	Bifidobacterium_phage	6.3e-39	86.4
WP_016462997.1\|1308145_1308730_-	hypothetical protein	NA	NA	NA	NA
WP_016462996.1\|1308794_1309652_-	hypothetical protein	E5DV53	Deep-sea_thermophilic_phage	6.4e-62	49.0
WP_016462995.1\|1309668_1310283_-	hypothetical protein	NA	NA	NA	NA
WP_016462994.1\|1310306_1311467_-	hypothetical protein	NA	NA	NA	NA
WP_016462993.1\|1311408_1312902_-\|portal	phage portal protein	D7NW49	Streptomyces_phage	3.9e-59	32.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021553

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection