CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024956	Pectobacterium atrosepticum strain 36A chromosome, complete genome	8 crisprs	csa3,RT,WYL,DinG,DEDDh,cas3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	0	18	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024956_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_1

10267-10366

Orphan

Consensus_repeat	Method
TTGTTAGCGAAACGTTTCGATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024956_1

>merge|NZ_CP024956|1|10267-10366|CRISPRCasFinder
TTGTTAGCGAAACGTTTCGATGGCGATCACATTTTTTTTATTTCTTCGTTGCCTTTCCCACTTCTTTTTCTAGAATGTTGTTAGCGAAACGTTTCGCTGG

>NZ_CP024956|1|1|10267-10366|CRISPRCasFinder
TTGTTAGCGAAACGTTTCGATGG	CGATCACATTTTTTTTATTTCTTCGTTGCCTTTCCCACTTCTTTTTCTAGAATG
TTGTTAGCGAAACGTTTCGCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_011091658.1\|9778_10174_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|225653
NZ_CP024956.1\|WP_011091662.1\|13312_14200_+\|ribose-ABC-transporter-substrate-binding-protein-RbsB	unknown	unknown	gnl\|CDD\|182620
NZ_CP024956.1\|WP_011091657.1\|8871_9534_-\|response-regulator	unknown	unknown	gnl\|CDD\|182387
NZ_CP024956.1\|WP_039297258.1\|2167_3646_-\|ATPase-RavA-stimulator-ViaA	unknown	unknown	gnl\|CDD\|236815
NZ_CP024956.1\|WP_039297252.1\|15334_16321_+\|ribose-operon-transcriptional-repressor-RbsR	unknown	unknown	gnl\|CDD\|182448
NZ_CP024956.1\|WP_011091665.1\|22019_22541_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|236750
NZ_CP024956.1\|WP_005976531.1\|564_1026_-\|transcriptional-regulator-AsnC	unknown	unknown	gnl\|CDD\|183019
NZ_CP024956.1\|WP_039297256.1\|3651_5151_-\|ATPase-RavA	unknown	unknown	gnl\|CDD\|184118
NZ_CP024956.1\|WP_011091659.1\|10378_10798_+\|D-ribose-pyranase	unknown	unknown	gnl\|CDD\|183318
NZ_CP024956.1\|WP_039289264.1\|1178_2171_+\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|225304
NZ_CP024956.1\|WP_011091663.1\|14395_15322_+\|ribokinase	unknown	unknown	gnl\|CDD\|236858
NZ_CP024956.1\|WP_039297261.1\|31_475_-\|FMN-binding-protein-MioC	unknown	unknown	gnl\|CDD\|181608
NZ_CP024956.1\|WP_039296588.1\|22554_23109_-\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP024956.1\|WP_011091667.1\|23322_23592_+\|YihD-family-protein	unknown	unknown	gnl\|CDD\|368826
NZ_CP024956.1\|WP_047710004.1\|10805_12311_+\|ribose-ABC-transporter-ATP-binding-protein-RbsA	unknown	unknown	gnl\|CDD\|236755
NZ_CP024956.1\|WP_011091656.1\|7525_8875_-\|two-component-system-sensor-histidine-kinase-QseC	unknown	unknown	gnl\|CDD\|182388
NZ_CP024956.1\|WP_011091661.1\|12318_13287_+\|ribose-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181922
NZ_CP024956.1\|WP_039296585.1\|23670_24657_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|236974
NZ_CP024956.1\|WP_047710005.1\|5486_7355_+\|low-affinity-potassium-transporter-Kup	unknown	unknown	gnl\|CDD\|182693

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_011091658.1\|9778_10174_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	1.83121e-47
NZ_CP024956.1\|WP_011091662.1\|13312_14200_+\|ribose-ABC-transporter-substrate-binding-protein-RbsB	gnl\|CDD\|182620	PRK10653, PRK10653, ribose ABC transporter substrate-binding protein RbsB.	0
NZ_CP024956.1\|WP_011091657.1\|8871_9534_-\|response-regulator	gnl\|CDD\|182387	PRK10336, PRK10336, two-component system response regulator QseB.	5.04673e-121
NZ_CP024956.1\|WP_039297258.1\|2167_3646_-\|ATPase-RavA-stimulator-ViaA	gnl\|CDD\|236815	PRK10997, yieM, ATPase RavA stimulator ViaA.	0
NZ_CP024956.1\|WP_039297252.1\|15334_16321_+\|ribose-operon-transcriptional-repressor-RbsR	gnl\|CDD\|182448	PRK10423, PRK10423, transcriptional repressor RbsR; Provisional.	0
NZ_CP024956.1\|WP_011091665.1\|22019_22541_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|236750	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional.	3.22561e-121
NZ_CP024956.1\|WP_005976531.1\|564_1026_-\|transcriptional-regulator-AsnC	gnl\|CDD\|183019	PRK11179, PRK11179, DNA-binding transcriptional regulator AsnC; Provisional.	6.28016e-116
NZ_CP024956.1\|WP_039297256.1\|3651_5151_-\|ATPase-RavA	gnl\|CDD\|184118	PRK13531, PRK13531, regulatory ATPase RavA; Provisional.	0
NZ_CP024956.1\|WP_011091659.1\|10378_10798_+\|D-ribose-pyranase	gnl\|CDD\|183318	PRK11797, PRK11797, D-ribose pyranase; Provisional.	4.53565e-89
NZ_CP024956.1\|WP_039289264.1\|1178_2171_+\|aspartate--ammonia-ligase	gnl\|CDD\|225304	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism].	0
NZ_CP024956.1\|WP_011091663.1\|14395_15322_+\|ribokinase	gnl\|CDD\|236858	PRK11142, PRK11142, ribokinase; Provisional.	0
NZ_CP024956.1\|WP_039297261.1\|31_475_-\|FMN-binding-protein-MioC	gnl\|CDD\|181608	PRK09004, PRK09004, FMN-binding protein MioC; Provisional.	5.24277e-90
NZ_CP024956.1\|WP_039296588.1\|22554_23109_-\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	5.95537e-98
NZ_CP024956.1\|WP_011091667.1\|23322_23592_+\|YihD-family-protein	gnl\|CDD\|368826	pfam06288, DUF1040, Protein of unknown function (DUF1040). This family consists of several bacterial YihD proteins of unknown function.	2.03885e-54
NZ_CP024956.1\|WP_047710004.1\|10805_12311_+\|ribose-ABC-transporter-ATP-binding-protein-RbsA	gnl\|CDD\|236755	PRK10762, PRK10762, D-ribose transporter ATP binding protein; Provisional.	0
NZ_CP024956.1\|WP_011091656.1\|7525_8875_-\|two-component-system-sensor-histidine-kinase-QseC	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	0
NZ_CP024956.1\|WP_011091661.1\|12318_13287_+\|ribose-ABC-transporter-permease	gnl\|CDD\|181922	PRK09512, rbsC, ribose ABC transporter permease protein; Reviewed.	0
NZ_CP024956.1\|WP_039296585.1\|23670_24657_+\|serine/threonine-protein-kinase	gnl\|CDD\|236974	PRK11768, PRK11768, serine/threonine protein kinase.	0
NZ_CP024956.1\|WP_047710005.1\|5486_7355_+\|low-affinity-potassium-transporter-Kup	gnl\|CDD\|182693	PRK10745, trkD, low affinity potassium transporter Kup.	0

>NZ_CP024956.1|WP_011091658.1|9778_10174_+|YgiW/YdeI-family-stress-tolerance-OB-fold-protein
MKKAAALFAITALVSAPVFAAQSGGGFVNPETSAVGTHKGGFIDPQNSLTTVDKAKDLRDDSWVTLSGNIEKRIGDENYLFRDSTGTMEVEIDHKRWNGQMVSPTDKVEIQGELDKDFNSVELDVKQIRKL
>NZ_CP024956.1|WP_011091657.1|8871_9534_-|response-regulator
MRVLLIEDDRLIGDGLKAGLNKLGFNIDWFTEGKAGATALKAAPYDAVVLDLSLPGMDGMDILRQWRQAGHDEPVLILTARDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRHGQLQPVLTHGAVSLEPSSRSVTLNSEPLILKSRELALLELFLLNPNRVLTRAQLEEKLYGWDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGVGYILGDAP
>NZ_CP024956.1|WP_011091656.1|7525_8875_-|two-component-system-sensor-histidine-kinase-QseC
MNRLSLRLRLIAGFALLTLICWSVASLLSWYQTRHNINELFDTQQMLFAKRLATMNPDELQIQSTSLPKTKSLVHKNRGKQDDDALAFAIFTRNGKMVLNDGDNGKDFIFDSTRNGFTDGKLRDDNDAWRIVWLTTEDNRYVIAVGQEWEYRQDMTLDIVKTNLMPWLFALPIMLALLFWLVTRELSPLKRIAAELQLRSPDESTPLATQRIPQEVLPLVNALNLLFSRIHDMLTRERRFTSDAAHELRSPLAALKVQTEVAQLAHDDEAMRRHALMNLDKGIDRATRLVDQLLTLSRLDAESHPEGMQPVQFNELLQQAVIAHYHTAQTAGIELTLDLPNTPIIRQGHPLLLTLLVRNLLDNAIRYSHEGGIVSLTLTERGFQVADNGPGISDEALARIGERFYRPPGQEKSGSGLGISIVNNIAMLHQMRVTFTNQPEGGLIVSVNW
>NZ_CP024956.1|WP_047710005.1|5486_7355_+|low-affinity-potassium-transporter-Kup
MSSEHKRSLPAVTLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVEPDSVFGFLSLIFWLLVLVVSLKYLTYVMRADNAGEGGILTLMSLAGRHTSDRMTSVLVIMGLIGGSFFYGEVVITPAISVMSAMEGLEIAAPSMDSYIVPLSIVVLTLLFIIQKHGTGSVGKLFAPVMLIWFLTLGILGARSIIANPEVLQALNPMYAVRFFIEYKAVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLMVLATLATIIASQAVISGVFSLTRQAVRLGYLPPMRIVHTSDMESGQIYIPAINWMLYIAVVIVIVSFEHSSNLAAAYGIAVTGTMVITSILFCTVAVKNWLWHRYLAWVLLAGLLIIDVPMFLANVVKILSGGWLPLALGMVMFIIMTTWKSERFRLLRRLHEHGNSLDAMIASLEKSPPTRVPGTAVYFSRATRVIPFALLHNLKHNKILHERVVLLTMRTEDAPYVLNARRVTVEQLSPTFWRVIANYGWRETPDVEEVFQRCWQEGLTCQMMETSFFMSNESLIIGERPWYLRLRGKLFMMLSRNALRAADQFEIPPNRLIELGIQVEI
>NZ_CP024956.1|WP_039297256.1|3651_5151_-|ATPase-RavA
MRQTAALAERISRLSHALEHGLYERQHAIRLCLLAALSGESVFLLGPPGIAKSMIARRLKFAFSHANAFEYLMTRFSTPEEVFGPLSIQALKDEGRYQRLTAGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGNSEDTIPMRLLVAASNELPEADGGLEALYDRMLIRLWLDRVQEKQNFRALLVNNSSDRDNPVPPALSVSNEEYQQWQKDIEHVALPEVGFELIYTLRQQLDALEQAPYISDRRWKKALRLLQASAFFCGRDAITPVDIILLKDCLWHDQSTLTLIERQLELLITEHAYQQKSLLFRLQQVNTKRQQYQREQSELQAFSVEKQGHFLGRKFHYSLPDTIAAETLDLVLQRPLILHDIEVNHLIIEKNALQGWLQKGGEIRGKLNGIGFTQRLDLLVDDRQHLAIRDISLQSSILSLPEKRDCALPAEITDEYEKLNMQLREQRRLFSQHQPCLFVPGEWLAKIEASLQQVAEQIQQSEQQD
>NZ_CP024956.1|WP_039297258.1|2167_3646_-|ATPase-RavA-stimulator-ViaA
MITLESLEMLLSIDENELLDDLVVALLATPQLAFFFEKYPSLKSALLNDLPHWKETLKQRLRTTQVPPELEREFSCYQRSQSVDNQAFQTRLPAIMDTLNNVESPFLTQASQLITSPESTLGQKITSGLHALFLQRWRLSLTLQTVSLHQQLMDQEREILLDELQQRLTLSGKLEPILAENENAAGRLWDLSAAQRIHTDPRPLLDFGAFLQRQPALQKLAERLGRSRETKSILTQEAPQEAFRVRVREPATVPEQVSGVHQSDDILRLMPTELVTLGISELEFEFYRRLLEHRLLTYRLQGESWREKVTERPVVHQQNEQQPRGPFIVCVDTSGSMGGFNERCAKAFCLALMRIALADNRRCYIMLFSTGVVKYELTSENGLEQAIRFLSQSFRGGTDMSACLSALLDKMDDSLWHDADAVVISDFIAQRLPDEVVNKVKSRQKQLQHRFHAVAMSDHGKPGIMHIFDHIWRFDTGLKSRLMRRWQHGKAY
>NZ_CP024956.1|WP_039289264.1|1178_2171_+|aspartate--ammonia-ligase
MKKQYIEKQQQISFVKSFFSSQLEQLLGLIEVQAPILSRIGDGTQDNLSGTEKAVQVKVKALPDATFEVVHSLAKWKRKTLGAYDFSFGEGIYTHMKALRPDEDRLSPIHSVYVDQWDWERVMGDGERNAEYLKSTVTRIYQGIKATEAAVHQAFGIQPFLPEQIHFVHTETLLKRYPDLDAKGRERAIAKELGAVFLIGIGGKLSSGHSHDVRAPDYDDWTTPGEQELAGLNGDIVVWNPVLNDAFEISSMGIRVDAEALTRQLALTQDEERLKLEWHQALLRGEMPQTIGGGIGQSRLVMLLLQLPHIGQVQCGVWPQPLRESVSGLL
>NZ_CP024956.1|WP_005976531.1|564_1026_-|transcriptional-regulator-AsnC
MAEIYQIDNLDRGILSALMENARTPYAELAKQFSVSPGTIHVRVEKMKQAGIIIGTRLDVNPKQLGYDVCCFIGIILKSAKDYPSALERLNNLEEVVEAYYTTGHYSIFIKVMCRSIEALQHVLINKIQTIDEIQSTETLISLQNPIMRTIAP
>NZ_CP024956.1|WP_039297261.1|31_475_-|FMN-binding-protein-MioC
MADIILISGSTLGSAEYVAEHLAELLEKDDFSTEILHGPTLDALPESGIWLVVTSTHGAGEFPDNLKALFEQLEQQKPDLSQVNFGAIGIGSKEYDTFCGAIQTADRLLAQFGAKRIGEILEIDITQHQIPEDPAEEWLGSWVNLLK
>NZ_CP024956.1|WP_011091659.1|10378_10798_+|D-ribose-pyranase
MKKAALLNSDISSVIARLGHTDSLVIGDAGLPIPETTTRIDLALTHNVPTFLQVVNVVTSEMQVEAAILAEEMIEKNPAVHDALLDQLKRLEQHQGNSIALHYVSHEEFKTQSGKSRAIIRSGECSPYANVILCAGVTF
>NZ_CP024956.1|WP_047710004.1|10805_12311_+|ribose-ABC-transporter-ATP-binding-protein-RbsA
MQPLLQLQGITKSFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIHFLEQEVDFNGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRFGRIDWNKMYAEADKLLKRLNLRYDSRRMVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETASLFSVINELQSQGCGIVYISHRLKEIFEICDDITVFRDGQFIGERPVSDLEEDTLIEMMVGRKLEDQYPRSNKAPGEVRLKVQNLSGPGVDSVSFTVRKGEILGVAGLMGAGRTELMKILYGALPRTGGNVTLDGRDVVTRKPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSHAGGRLKHAEEQLTVADFIRLFNVKTPSMEQPIGLLSGGNQQKVAIARGLMTRPNVLILDEPTRGVDVGAKKEIYQLINQFKEEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGDFPIEQATQEALMAAAVGKQYGAKQE
>NZ_CP024956.1|WP_011091661.1|12318_13287_+|ribose-ABC-transporter-permease
MSSQSIAAKRWFSKEWLLEQKSLIALLILIAVVSALSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGLEVNALVAVFGALAVGALIGAGTGVIVSKGKVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFSDVADAFGWFGIGRPLGIPTPIWIMAIVFAAAWYMLHHTRLGRYIYALGGNESATRLSGISVDKIKIIVYSLCGLLSALAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKSSK
>NZ_CP024956.1|WP_011091662.1|13312_14200_+|ribose-ABC-transporter-substrate-binding-protein-RbsB
MNMKKLATLVSAVALSATVSANALAKDTVALVVSTLNNPFFVSMKEGAQKEADKLGYELIVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAIKMANQAKIPVITLDRVASSGDVVSHVASDNAFGGKVAGDFIAKKLGEGAKVIQLEGIAGTSAARERGAGFMKSAEKNKFAMLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKTDVLVVGFDGTQDGVKAVESGKLAATVAQRPDQIGVIGIETAAKVLKGEKTQAIIPVDLKLVAK
>NZ_CP024956.1|WP_011091663.1|14395_15322_+|ribokinase
MKTGKLVVLGSINADHILNLEQFPRPGETVIGEQYSVAFGGKGANQAVAAGRSGANIAFIACVGEDDIGSRICQQLSKDNIDVSAVEAISGETTGVALIFVNAEAENMIAINAGANAAVTPDYLHRHQQHIIDASALLMQLESPLETVIAAARLAHEHQTKVILNPAPARELPDELLSLVDMITPNETEAQLLTEITVETEEDAARAAQVLHDKGIETVLITLGSRGVWLSESGQGQRIPGYRVKAVDTIAAGDTFNGALVTALLENQPMSSAVKFAHAAAAISVTRRGAQPSVPWREEIDAFLQAQE
>NZ_CP024956.1|WP_039297252.1|15334_16321_+|ribose-operon-transcriptional-repressor-RbsR
MKDVARLAGVSTSTVSHVINNNRFVSDAIREKIMKAVDDLNYAPSALARSLKINQTRTIGMLLTASSNPFYAEVVRGVERCCYERGYSLILCNTEGDRDRMSHSLETLLQKRVDGVLLMCTESHRPLPEMMSRYPSIPMVMMDWAPFEGAIDVIKDNSLLGGEIATNYLISRGYKKIACIAGPKDKTTAYNRLEGYRQAMQLAGLSVPTDYEIFGDFEFETGYRAMQQLLALEDKPEAVFTSNDAMAVGVYHALYQAGLSIPQDMAVIGYDDIELARYMSPPLTTVHQPKDELGELAVDTLLYRLEHPNTEPNVLVLTPELMVRQSVQ
>NZ_CP024956.1|WP_011091665.1|22019_22541_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MNSNHLPLLAIVAYSGTGKTTLLKHVIPLLANQGIRIGLIKHTHHQMDIDTPGKDSYELRKAGAAQTIVASSQRWALMTETPEQEEPDLYDLAEKMDASTLDLVLVEGFKHEKIAKIALFRQSLGRELSDLIDEYVIAIAADSEIGTILPVLDINQPEQVANFIHQWLQSSRL
>NZ_CP024956.1|WP_039296588.1|22554_23109_-|molybdenum-cofactor-guanylyltransferase-MobA
MITGVILAGGRATRMGGHDKGLIVLNGVPLYLHVLSRLKTQVDEVIISANRNQDVYEQSGCRIIGDSDANFLGPLAGILSGLHASTSEWVVFVPCDVPVFPLDLVRRLWQARGEANATYARDGERPHPTLLLINKNLIEQLEAYLHLGNRKLMLFMEQVGAKPVSFNDQPEAFHNLNSPEDLSN
>NZ_CP024956.1|WP_011091667.1|23322_23592_+|YihD-family-protein
MKCHRVNELIELLHPAWQKEPDLNLVQFLQNLAQEAGFEGQLNELTDDILIYHLKMRDSDKEQVIPGLKKDYEEDFKTALLRARGVIKD
>NZ_CP024956.1|WP_039296585.1|23670_24657_+|serine/threonine-protein-kinase
MNSSVFNFQTLFPDLIVDALLDVGLRVDSGLTALNSYENRVYQFADEDRKRFVVKFYRPERWSESQIQEEHIFALQLAEDEVPIVAPVSLNGQTLNVYEGFHFAVFPSIGGRQYEMDNEEQLEWVGRFLGRIHQTGQKSLFTERPTIGVNEYLHEPYRLLETCPLIPKIHRHSFLQATRQLIDTVETYWHSDWRPLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGDRREQRIQLDILLEAYSEFADFQEKELALIEPLRAMRQVYYLAWIARRWEDPAFPKNFPWMTDADFWLKQTAIFIGQNQLLQEPPLQLMPMY

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Crispr_ID: NZ_CP024956_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_2

30437-30536

Unclear

Consensus_repeat	Method
AAAACGCCGGGAGCGTTTTTGAACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024956_2

>merge|NZ_CP024956|2|30437-30536|CRISPRCasFinder
AAAACGCCGGGAGCGTTTTTGAACGTCACAACGTGACGGCCTTTTAGGGCGAGTCTCAGGGATGAGACGAGTAGCAAAACGCCGGGAGCGTTTTTGAACG

>NZ_CP024956|2|2|30437-30536|CRISPRCasFinder
AAAACGCCGGGAGCGTTTTTGAACG	TCACAACGTGACGGCCTTTTAGGGCGAGTCTCAGGGATGAGACGAGTAGC
AAAACGCCGGGAGCGTTTTTGAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_011091677.1\|39003_39615_+\|glucose-1-phosphatase	unknown	unknown	gnl\|CDD\|181872
NZ_CP024956.1\|WP_005968247.1\|33849_34899_-\|nitrogen-regulation-protein-NR(II)	unknown	unknown	gnl\|CDD\|182947
NZ_CP024956.1\|WP_011091674.1\|32428_33841_-\|nitrogen-regulation-protein-NR(I)	unknown	unknown	gnl\|CDD\|182842
NZ_CP024956.1\|WP_039297252.1\|15334_16321_+\|ribose-operon-transcriptional-repressor-RbsR	unknown	unknown	gnl\|CDD\|182448
NZ_CP024956.1\|WP_011091672.1\|29729_30284_+\|Der-GTPase-activating-protein-YihI	unknown	unknown	gnl\|CDD\|235370
NZ_CP024956.1\|WP_011091665.1\|22019_22541_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|236750
NZ_CP024956.1\|WP_039289301.1\|39679_40117_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP024956.1\|WP_071598471.1\|29527_29719_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_039289293.1\|30605_31979_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NZ_CP024956.1\|WP_039289303.1\|40239_41181_+\|fatty-acid-biosynthesis-protein-FabY	unknown	unknown	gnl\|CDD\|370533
NZ_CP024956.1\|WP_011091675.1\|35239_36649_-\|glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|181884
NZ_CP024956.1\|WP_039296578.1\|41490_43182_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|282957
NZ_CP024956.1\|WP_100675176.1\|25682_28472_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP024956.1\|WP_011091676.1\|37018_38842_+\|ribosome-dependent-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_CP024956.1\|WP_039296588.1\|22554_23109_-\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP024956.1\|WP_011091667.1\|23322_23592_+\|YihD-family-protein	unknown	unknown	gnl\|CDD\|368826
NZ_CP024956.1\|WP_011091669.1\|24681_25305_+\|thiol:disulfide-interchange-protein-DsbA	unknown	unknown	gnl\|CDD\|182863
NZ_CP024956.1\|WP_086935233.1\|28890_29529_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP024956.1\|WP_039296585.1\|23670_24657_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|236974
NZ_CP024956.1\|WP_015842303.1\|32162_32285_-\|YshB-family-small-membrane-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_011091677.1\|39003_39615_+\|glucose-1-phosphatase	gnl\|CDD\|181872	PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional.	8.6543e-146
NZ_CP024956.1\|WP_005968247.1\|33849_34899_-\|nitrogen-regulation-protein-NR(II)	gnl\|CDD\|182947	PRK11073, glnL, nitrogen regulation protein NR(II).	0
NZ_CP024956.1\|WP_011091674.1\|32428_33841_-\|nitrogen-regulation-protein-NR(I)	gnl\|CDD\|182842	PRK10923, glnG, nitrogen regulation protein NR(I); Provisional.	0
NZ_CP024956.1\|WP_039297252.1\|15334_16321_+\|ribose-operon-transcriptional-repressor-RbsR	gnl\|CDD\|182448	PRK10423, PRK10423, transcriptional repressor RbsR; Provisional.	0
NZ_CP024956.1\|WP_011091672.1\|29729_30284_+\|Der-GTPase-activating-protein-YihI	gnl\|CDD\|235370	PRK05244, PRK05244, Der GTPase-activating protein YihI.	3.40281e-62
NZ_CP024956.1\|WP_011091665.1\|22019_22541_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|236750	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional.	3.22561e-121
NZ_CP024956.1\|WP_039289293.1\|30605_31979_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP024956.1\|WP_039289303.1\|40239_41181_+\|fatty-acid-biosynthesis-protein-FabY	gnl\|CDD\|370533	pfam09500, YiiD_C, Putative thioesterase (yiiD_Cterm). This entry consists of a broadly distributed uncharacterized domain often found as a standalone protein. The member from Shewanella oneidensis is described from crystallography work as a putative thioesterase because it belongs to the HotDog clan of enzymes. About half of the members of this family are fused to an Acetyltransf_1 domain pfam00583.	1.43852e-61
NZ_CP024956.1\|WP_011091675.1\|35239_36649_-\|glutamate--ammonia-ligase	gnl\|CDD\|181884	PRK09469, glnA, glutamate--ammonia ligase.	0
NZ_CP024956.1\|WP_039296578.1\|41490_43182_-\|AsmA-family-protein	gnl\|CDD\|282957	pfam05170, AsmA, AsmA family. The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.	3.0113e-17
NZ_CP024956.1\|WP_100675176.1\|25682_28472_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP024956.1\|WP_011091676.1\|37018_38842_+\|ribosome-dependent-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP024956.1\|WP_039296588.1\|22554_23109_-\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	5.95537e-98
NZ_CP024956.1\|WP_011091667.1\|23322_23592_+\|YihD-family-protein	gnl\|CDD\|368826	pfam06288, DUF1040, Protein of unknown function (DUF1040). This family consists of several bacterial YihD proteins of unknown function.	2.03885e-54
NZ_CP024956.1\|WP_011091669.1\|24681_25305_+\|thiol:disulfide-interchange-protein-DsbA	gnl\|CDD\|182863	PRK10954, PRK10954, thiol:disulfide interchange protein DsbA.	2.31155e-152
NZ_CP024956.1\|WP_086935233.1\|28890_29529_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	1.30973e-113
NZ_CP024956.1\|WP_039296585.1\|23670_24657_+\|serine/threonine-protein-kinase	gnl\|CDD\|236974	PRK11768, PRK11768, serine/threonine protein kinase.	0
NZ_CP024956.1\|WP_039289301.1\|39679_40117_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	7.39846e-96

>NZ_CP024956.1|WP_011091672.1|29729_30284_+|Der-GTPase-activating-protein-YihI
MNRPVKGVADKAEKSKVKRKTREELEREARERKRDKKHRGHSAGSRTQEKASTDQNSGQRKVADPRIGSKKPVQLGVLDSAIVKPKPKSKPSEPVEKVVAAKPTMSPEEELAMLENDTRLDALLDRLDSGETLSAKDQSWVDETLDRIDILMEELGIELGDDDEEEQQEDMLQLLKRNNPKDAL
>NZ_CP024956.1|WP_071598471.1|29527_29719_+|hypothetical-protein
MVISIWISVWLGIIPVTDNKGGFICPKVQQTDVKRKAQSSDMGAFLLPSFLLDSAALPLYLCT
>NZ_CP024956.1|WP_086935233.1|28890_29529_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MVTQQYNYHMTRFIISAPDIRHLETDNGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQVAEGVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVVLMDIRHPLKDLDQQMILWAVDVKLPVLVLLTKADKLASGARKAQLNMVREAVLPFMGDIQVEAFSSLKKIGVDKLQQKLDNWFSTLQHIEEEQDAE
>NZ_CP024956.1|WP_100675176.1|25682_28472_+|DNA-polymerase-I
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYHPSHVAVVFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHSMVKAMGLPLLAVSGVEADDVIGTLAVQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNNTILGPQEVCDKYGIPPELIIDFLALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAELSFRGAKTMTPKLEQHKEVAYLSYQLATIKTDVELELSCEQLTVNELDVDELHRLFSRYEFKRWLSDIESGTWMQGKKSSQPVQTVSNAVVEQAVEEDNAPTLSADGYVTILDEKTLLDWIERLKQAEVFAFDTETDGLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRAQVLALFKPLLEDEKLLKIGQNLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLKHKTTTFEEIAGKGKNQLTFNQIALEQAGPYAAEDADVTLHLHQTLWGKLQPHADLCQVFQAIDMPLVPVLSRIERTGVLIDPAILAEHSKELTTRLAGLETQAYELAGEEFNLASTKQLQGILYEKQKLPILKKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIASKGYSIVAADYSQIELRIMAHLSGDKGLLNAFANGLDIHRATASEVFGIALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNIPRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGAERAAINAPMQGTAADIIKKAMIAIDDWLQKDTPLVKMIMQVHDELVFEIHDSVIEESISKINILMEGCMKLNVPLQVDIGTGMNWDQAH
>NZ_CP024956.1|WP_011091669.1|24681_25305_+|thiol:disulfide-interchange-protein-DsbA
MKRLWLALIGVVLAFSASAAEFSDGKQYVELDKPATQEPQVLEFFSFYCPHCYQFEQVYHVPDAVKKALPEGTKMTRYHVDFLGPLGKNLTQAWAVAMALGVEDKITPLMFDAVQKTQTVQKPEDIRAVFVKAGVSAEEFDGALNSFVVKSLVAQQEKAAADLQLRGVPAMFVNGKYMIKNDGLDTSSMDGYVKQYADVVKFLITKK
>NZ_CP024956.1|WP_039296585.1|23670_24657_+|serine/threonine-protein-kinase
MNSSVFNFQTLFPDLIVDALLDVGLRVDSGLTALNSYENRVYQFADEDRKRFVVKFYRPERWSESQIQEEHIFALQLAEDEVPIVAPVSLNGQTLNVYEGFHFAVFPSIGGRQYEMDNEEQLEWVGRFLGRIHQTGQKSLFTERPTIGVNEYLHEPYRLLETCPLIPKIHRHSFLQATRQLIDTVETYWHSDWRPLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLHGDRREQRIQLDILLEAYSEFADFQEKELALIEPLRAMRQVYYLAWIARRWEDPAFPKNFPWMTDADFWLKQTAIFIGQNQLLQEPPLQLMPMY
>NZ_CP024956.1|WP_011091667.1|23322_23592_+|YihD-family-protein
MKCHRVNELIELLHPAWQKEPDLNLVQFLQNLAQEAGFEGQLNELTDDILIYHLKMRDSDKEQVIPGLKKDYEEDFKTALLRARGVIKD
>NZ_CP024956.1|WP_039296588.1|22554_23109_-|molybdenum-cofactor-guanylyltransferase-MobA
MITGVILAGGRATRMGGHDKGLIVLNGVPLYLHVLSRLKTQVDEVIISANRNQDVYEQSGCRIIGDSDANFLGPLAGILSGLHASTSEWVVFVPCDVPVFPLDLVRRLWQARGEANATYARDGERPHPTLLLINKNLIEQLEAYLHLGNRKLMLFMEQVGAKPVSFNDQPEAFHNLNSPEDLSN
>NZ_CP024956.1|WP_011091665.1|22019_22541_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MNSNHLPLLAIVAYSGTGKTTLLKHVIPLLANQGIRIGLIKHTHHQMDIDTPGKDSYELRKAGAAQTIVASSQRWALMTETPEQEEPDLYDLAEKMDASTLDLVLVEGFKHEKIAKIALFRQSLGRELSDLIDEYVIAIAADSEIGTILPVLDINQPEQVANFIHQWLQSSRL
>NZ_CP024956.1|WP_039297252.1|15334_16321_+|ribose-operon-transcriptional-repressor-RbsR
MKDVARLAGVSTSTVSHVINNNRFVSDAIREKIMKAVDDLNYAPSALARSLKINQTRTIGMLLTASSNPFYAEVVRGVERCCYERGYSLILCNTEGDRDRMSHSLETLLQKRVDGVLLMCTESHRPLPEMMSRYPSIPMVMMDWAPFEGAIDVIKDNSLLGGEIATNYLISRGYKKIACIAGPKDKTTAYNRLEGYRQAMQLAGLSVPTDYEIFGDFEFETGYRAMQQLLALEDKPEAVFTSNDAMAVGVYHALYQAGLSIPQDMAVIGYDDIELARYMSPPLTTVHQPKDELGELAVDTLLYRLEHPNTEPNVLVLTPELMVRQSVQ
>NZ_CP024956.1|WP_039289293.1|30605_31979_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSIPSVDWDLALIQKYNYSGPRYTSYPTALEFSEAYDEPAFQHAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPLFAGRTVTQLHWGGGTPTYLNKLQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTPESFAFTLQRVAELSPHRLSVFNYAHLPSLFAAQRKIKDADLPSAEQKLDILQQTIGSLTQSGYQFIGMDHFARPDDELAVAQREGTLHRNFQGYTTQGDSDLVGMGVSAISMIGDNYAQNQKELKQYYAQVKDKGNGLWRGLQLTRDDCLRRDVIKTLICNFQLSYAPIEAEYAIDFKTYFEQDLALLAPLVADGLVDSQEDGLAVTPKGRLLIRNICMCFDVYLRSKLRTQQFSRVI
>NZ_CP024956.1|WP_015842303.1|32162_32285_-|YshB-family-small-membrane-protein
MLDSLISVATHGAEIGSAASHSPQAAIAAVLCAALINFFS
>NZ_CP024956.1|WP_011091674.1|32428_33841_-|nitrogen-regulation-protein-NR(I)
MQRGIVWIVDDDSSIRWVLERALAGAGLTCATFENGNQVLHALATQTPDVLLSDIRMPGMDGLALLQQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALAERAISHYLEQQQPVRNQPINGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRTKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAAVKVDVRIIAATHQNLEQRVQEGKFRDDLFHRLNVIRVHLPPLRERREDIPRLARYFLQATAKELGVEPKNLHPEAETALTRLPWPGNVRQLENTCRWLTVMAAGQEVLIQDLPPELFETTAPDSTVHILPDSWATLLAQWADRALRSGHQNLLAEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME
>NZ_CP024956.1|WP_005968247.1|33849_34899_-|nitrogen-regulation-protein-NR(II)
MATGTLPDAGQILNSLINSILLLDNDLAIHYSNPAAQQLLAQSSRKLSGTPLPDLLGYFSLNIDLLRESLDSGQGFTDNEVTLVVDGKAHIMSLTAQRVQNDFILLEMAPMDNQRRLSQEQLQHAQQQAARDLVRGLAHEIKNPLGGLRGAAQLLAKALPDPALTEYTKVIIEQADRLRNLVDRLLGPQQPGLHVTQSIHQVAERVCQLVSLEKPDNVTLVKDYDPSLPELTHDPDQIEQVLLNITRNALQALGEEGGTITIRTRTAFQLTLHGVRYRLAARIDVEDDGPGVPAQLQDTLFYPMVSGREGGTGLGLSIARSLIDQHSGKIEFNSWPGHTEFSVYLPIRQ
>NZ_CP024956.1|WP_011091675.1|35239_36649_-|glutamate--ammonia-ligase
MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAMIDPFFEDTTLIIRCDILEPGTMQGYDRDPRSIAKRAEDFLRSSGIADTVLFGPEPEFFLFDDIRFGSSTSGSHVAIDDVEAYWNSGKAYEGGNKGHRPGLKGGYFPVPPVDSSQDIRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHAYGKTATFMPKPMFGDNGSGMHCHMSLSKDGTNLFAGDKYGGLSEMALFYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLCFAALLMAGLDGIINKIHPGDAMDKNLYDLPPEEEAEIPKVAGSLDEALAALNEDREFLTRGGVFTDDAIEAYIELRKPEIDRVRMTPHPVEFELYYSV
>NZ_CP024956.1|WP_011091676.1|37018_38842_+|ribosome-dependent-GTPase-TypA
MIENLRNIAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHNDMAEDMTPLYQAIVDHVSPPLVEMDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDSEGKTRNGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTVTMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVDETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGSVMQAMGERKGDVKDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYDDVRQGEIGQRQNGVLVSNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKRASRGSKDV
>NZ_CP024956.1|WP_011091677.1|39003_39615_+|glucose-1-phosphatase
MLYIFDLGNVVIDIDFKRVLGVWSNLSSAPLATLQERFVMGEAFEQHERGEISDEEFATRLCQEMGIALSFEQFTAGWQAIFVALRPEVIDIMQRLRQEGHRVVILSNTNRLHCSHWPALFPEVATAADRLYLSQDIGLRKPELAIYQYVLTQEGVTPAQAVFFDDNSANVDAAQSLGIHSILVTDRQVVTDFFAMQAITAKA
>NZ_CP024956.1|WP_039289301.1|39679_40117_+|D-tyrosyl-tRNA(Tyr)-deacylase
MIALIQRVSSASVTVEGNIIGEIDKGLLILLGVEQGDDEQKATRLCERVLGYRIFADDDGKMNLNVRQAGGNVLVVSQFTLVADTQRGMRPGFSRGAHPSEADRLYQYFVEQCREQGVHTETGQFAADMKVALVNDGPVTFWLQT
>NZ_CP024956.1|WP_039289303.1|40239_41181_+|fatty-acid-biosynthesis-protein-FabY
MYHLRVPESAEDLDAYYQFRWEMLRKPLHQPLGSERDAYDALAHHQTVVDEQGRLVAIGRLSINADNEAAIRFLAVHPDLRGKGLGTLLAITLESVARQEGVKRVVCSAREDAMDFFSKLGFVNQGEISAPQTTPVRHFLMIKPVATLDDILHRADWCGQLQQAWYDHIPLSEKMGVRISQYTGKKFITTMPEAGNQNPHHTLFAGSMFSLATLTGWGLIWLLLRERHLGGTIILADAHIRYSTPVSGRPSAIADLGSLSGDLDRLARGRKARVQLNVELFGDDNKGALFEGVYIVLPAQPDAPLEEGGSEVD
>NZ_CP024956.1|WP_039296578.1|41490_43182_-|AsmA-family-protein
MKFIGKLLLTLLLLAFLALVVVYVLLQTSWAAGWVSNWVNQNTDYQLSLGKINHDWSTADHIQLTDVSFGQKNQPPTLTAKQVSAGFSVRQVTEPHHFASLELEGGTLNLSSQAATLPIEADVLQLRTMALQAKDGDWRLNGQQINGGIMPWQPEAGYLLGKQGQFQLSARSLELNDIPASQVLVQGEINHNQLILSNFGADVAQGQLTGNASRAEDGSWQVGSLRLSNVRLQTQRTPEAFWQPVTELPSVTVNRFDLIDARIEGPGWAFIDLDVALQNVTFKQNDWQSEGGTLSFNATDIVNGNMHLIDPIVNLDLSPAGINIKQFSTRWEGGLLRTNGNWQRNNRRLQLNEFVVAGMEYTLPGDWRQRWQATLPSWLAEVNVRKFTANRNLLIDINPDFPFQLTALDGYGSDLLLARNHQWGMWTGSLNLNASNATFNKVDVRRPSIALVANDNQIAINELSAFTQNGMLDAKATINQQPARNFSLSLTGRAVPLDVLTRWGWPEPTTAPTGNTNLQLQLNGRLAADTPLKPTLNGTLQGVDSNDHPIRQQMHQGAVTEAQ

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Crispr_ID: NZ_CP024956_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_3

804801-804905

Orphan

Consensus_repeat	Method
CCGTGTATCTCGATGCTTAAGCGATCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024956_3

>merge|NZ_CP024956|3|804801-804905|CRISPRCasFinder
CCGTGTATCTCGATGCTTAAGCGATCGGCGTTAGGCCATGCGGGTTAGTTAATTCTATTTATCAGGAGCGACACGCTCCGTGTATCTCGATCCTTAAGCGATCGG

>NZ_CP024956|3|3|804801-804905|CRISPRCasFinder
CCGTGTATCTCGATGCTTAAGCGATCGG	CGTTAGGCCATGCGGGTTAGTTAATTCTATTTATCAGGAGCGACACGCT
CCGTGTATCTCGATCCTTAAGCGATCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_039294682.1\|802051_802801_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235816
NZ_CP024956.1\|WP_039296921.1\|813989_814637_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|185044
NZ_CP024956.1\|WP_039296913.1\|798574_801448_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP024956.1\|WP_011092357.1\|804944_805769_+\|phosphodiesterase	unknown	unknown	gnl\|CDD\|277347
NZ_CP024956.1\|WP_039290007.1\|803798_804698_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP024956.1\|WP_011092359.1\|806849_808157_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP024956.1\|WP_011092347.1\|792626_793409_+\|acetolactate-decarboxylase	unknown	unknown	gnl\|CDD\|377014
NZ_CP024956.1\|WP_011092350.1\|796891_798007_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP024956.1\|WP_039296915.1\|808183_809446_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|236549
NZ_CP024956.1\|WP_011092348.1\|793430_795110_+\|acetolactate-synthase-AlsS	unknown	unknown	gnl\|CDD\|236312
NZ_CP024956.1\|WP_011092358.1\|805768_806857_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NZ_CP024956.1\|WP_039296917.1\|809540_811685_-\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|225882
NZ_CP024956.1\|WP_011092353.1\|801581_801947_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP024956.1\|WP_011092363.1\|812962_813571_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|372434
NZ_CP024956.1\|WP_011092366.1\|816097_816364_+\|FAD-assembly-factor-SdhE	unknown	unknown	gnl\|CDD\|182803
NZ_CP024956.1\|WP_039290000.1\|795176_796328_-\|lactaldehyde-reductase	unknown	unknown	gnl\|CDD\|182595
NZ_CP024956.1\|WP_011092365.1\|814860_815862_-\|tRNA-modifying-protein-YgfZ	unknown	unknown	gnl\|CDD\|236567
NZ_CP024956.1\|WP_011092355.1\|802936_803809_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP024956.1\|WP_039296910.1\|798068_798461_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP024956.1\|WP_039296919.1\|811904_812909_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380665

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_039294682.1\|802051_802801_+\|SDR-family-oxidoreductase	gnl\|CDD\|235816	PRK06500, PRK06500, SDR family oxidoreductase.	1.02347e-160
NZ_CP024956.1\|WP_039296921.1\|813989_814637_+\|hemolysin-III-family-protein	gnl\|CDD\|185044	PRK15087, PRK15087, hemolysin; Provisional.	1.10361e-131
NZ_CP024956.1\|WP_039296913.1\|798574_801448_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP024956.1\|WP_011092357.1\|804944_805769_+\|phosphodiesterase	gnl\|CDD\|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.37742e-82
NZ_CP024956.1\|WP_039290007.1\|803798_804698_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.33934e-69
NZ_CP024956.1\|WP_011092359.1\|806849_808157_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.31773e-107
NZ_CP024956.1\|WP_011092347.1\|792626_793409_+\|acetolactate-decarboxylase	gnl\|CDD\|377014	pfam03306, AAL_decarboxy, Alpha-acetolactate decarboxylase.	3.39035e-120
NZ_CP024956.1\|WP_011092350.1\|796891_798007_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP024956.1\|WP_039296915.1\|808183_809446_-\|MFS-transporter	gnl\|CDD\|236549	PRK09528, lacY, galactoside permease; Reviewed.	0
NZ_CP024956.1\|WP_011092348.1\|793430_795110_+\|acetolactate-synthase-AlsS	gnl\|CDD\|236312	PRK08617, PRK08617, acetolactate synthase AlsS.	0
NZ_CP024956.1\|WP_011092358.1\|805768_806857_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	2.2194e-158
NZ_CP024956.1\|WP_039296917.1\|809540_811685_-\|alpha-galactosidase	gnl\|CDD\|225882	COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism].	0
NZ_CP024956.1\|WP_011092353.1\|801581_801947_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.15265e-28
NZ_CP024956.1\|WP_011092363.1\|812962_813571_-\|HD-domain-containing-protein	gnl\|CDD\|372434	pfam13023, HD_3, HD domain. HD domains are metal dependent phosphohydrolases.	5.088e-65
NZ_CP024956.1\|WP_011092366.1\|816097_816364_+\|FAD-assembly-factor-SdhE	gnl\|CDD\|182803	PRK10878, PRK10878, FAD assembly factor SdhE.	7.56717e-47
NZ_CP024956.1\|WP_039290000.1\|795176_796328_-\|lactaldehyde-reductase	gnl\|CDD\|182595	PRK10624, PRK10624, L-1,2-propanediol oxidoreductase; Provisional.	0
NZ_CP024956.1\|WP_011092365.1\|814860_815862_-\|tRNA-modifying-protein-YgfZ	gnl\|CDD\|236567	PRK09559, PRK09559, putative global regulator; Reviewed.	0
NZ_CP024956.1\|WP_011092355.1\|802936_803809_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.42938e-75
NZ_CP024956.1\|WP_039296910.1\|798068_798461_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	8.46544e-72
NZ_CP024956.1\|WP_039296919.1\|811904_812909_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380665	cd20010, PBP1_AglR-like, Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) and similar proteins. Ligand-binding domain of DNA transcription repressor specific for alpha-glucosides (AglR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.52054e-81

>NZ_CP024956.1|WP_039290007.1|803798_804698_+|carbohydrate-ABC-transporter-permease
MSAENQIVDVRSVKSQRGESRSVTNPLRVTTRFTLPLLLICAALLWVSPFIWMLSSSISASSFGVDMASLLPRLPLTFDNFRDAWDSADWLRLYTNTLIFAVGTFLVQLVTITTAGYIFAYHEFRGKTLLFYLLLIQMMIMPVVMMVPNMMTLKQLGLLNTLTGVMMPYFASAFGVFLMRQAFLNIAKEIEEAALMEGCRWWQVVFHVLIPMTWPSILAFATVSITYHWNEYLWPLMVLNDPDKQVLTIGLVSFAMGAESGGQWGLICAGTLLVCLPLMVAFVVFQKQFLSSFGFSGIK
>NZ_CP024956.1|WP_011092355.1|802936_803809_+|sugar-ABC-transporter-permease
MRAKCFPYLVLLPTLVFLLAFTYFPLLRSVIDSLYDTRLNADTPLFVGLDNFARLVQDAVFWQALLNNVLYILMTVVPGVLLALLLAVLLWENTRVNRWLRTAFFFPMIIPLVSAATLWLFIFMPGLGLLDYYLAKVFGPMNNNYLGMSDSALVAVSVIGIWKFAGYYMLFFLAGLQAISTSAREAALMEGASRRQVFFYVTLPLLRPTIAFVVTIAFIYAITQIDHVAVMTRGGPNNATTVLLYYIQDLANDTHDLGKASAATFLTLALLFAFSIMNLKVLEKGAHYER
>NZ_CP024956.1|WP_039294682.1|802051_802801_+|SDR-family-oxidoreductase
MKRLQDKFALITGGTSGIGIETARQFLAEGATVAITGRDEKALARAQAELGHSTLAIRCDAGDIRAQHDLAQTLAQQWPRLDVLYANAGDVTHRSLEDWDEAAWDRLMATNLKGPFFLVQALLPLLNNPSSVILCGSTSAHIGLPQSSAYAASKAGLLSLARTLSAELVTRGIRVNGLSPGPTETPALDKLGLSPEQQRAMQEQIRQLVPIGRMGTPWELAKAAVFLASDESRFVVGTELLVDGGVANL
>NZ_CP024956.1|WP_011092353.1|801581_801947_-|helix-turn-helix-transcriptional-regulator
MSVHSPSANTPSDMAEPCPMVNFVNLIAGKWAIPILYRLIVIGEPVRFSALQRAIAPITQKELTRQLRLFEQRKLVQRKVYAEVPPRVEYQITPLGKSLQPTLDSLADWMRTHGKTLADGG
>NZ_CP024956.1|WP_039296913.1|798574_801448_+|aminomethyl-transferring-glycine-dehydrogenase
MTQTLSQLEHDGAFIERHIGPSVSQQQHMLSVVGATSLDALIRQIVPADIQLPSPPAVGEAVTEHEALAELKAIAGRNQRYKSYIGMGYSAVLMPPVILRNVLENPGWYTAYTPYQPEVSQGRLEALLNFQQVTQDLTGLDLASASLLDEATAAAEAMAMAKRISKIKQAERFFVADDVHPQTLDVVRTRAETFGFEIVVGKAEEALKDDAVFGVLLQQAGTTGELHDYSDLMAALKARKVVSCVASDIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFACRDEHKRAMPGRIIGVSRDAAGNTAFRMAMQTREQHIRREKANSNICTSQVLLANIAGMYAVFHGPEGLKRIAGRIHRLTDILAAGLTQGGLLLRHRSWFDTLTIEVADKDVVLSRALSFGINLRSDLASAVGITLDEATTREDVLALFAVLLGDDHGLDIEALDASIAQEVATIPAGLLRHDGILSHPVFNRYHSETEMMRYLHRLARKDLALNQAMIPLGSCTMKLNAAAEMLPITWPEFAELHPFCPPEQALGYRQMIEQLSGWLVQLTGYDAVCMQPNSGAQGEYAGLLAIRRYHESRNEAGRHLCLIPSSAHGTNPASAQMAGMEVVVVACDKQGNIDLHDLREKAQAAGEQLSCIMVTYPSTHGVYEETIREVCQIVHQYGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHQVVKIDGVLTDQGAVSAAPFGSASILPISWMYIRMMGAEGLKQASQMAILNANYIATRLQQAYPVLYTGRDGRVAHECILDIRPLKESTGISEMDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESQVEIDRFIDAMLAIRAEINRVAQGEWPLDDNPLVNAPHTQAELVADWAHPYSRELAVFPVGSEHKYWPSVKRLDDVYGDRNLFCSCVPMSDYA
>NZ_CP024956.1|WP_039296910.1|798068_798461_+|glycine-cleavage-system-protein-GcvH
MSNVPAELKYATSHEWVLHEGGGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEIVEINEDLESSPELVNSAPYTDGWLFRIKISDESDLDELLDAEGYQASLEEDE
>NZ_CP024956.1|WP_011092350.1|796891_798007_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MAKQTPLYQQHLADGAKMVDFHGWMMPLHYGSQLDEHHIVRRDAGIFDVSHMTIVDLHGVRTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEQHAAAFGVDIRERDELALVAVQGPQAQEKVQGLLKAKGLSDEDVAAVASMKPFFGKQAGDFFVATTGYTGEAGYEIALPNEQVVDFWQQLLAVGVKPCGLGARDTLRLEAGMNLYGQDMDEGISPLAANMGWTIAWQPEDRQFIGREALVHQREKGTEQLVGLVLTEKGVLRNDLSVRFTDSDGVMREGVITSGSFSPTLGVSIALARVPAGIGEQAIVQIRNRELPVRVTKPGFVRAGKAIVQY
>NZ_CP024956.1|WP_039290000.1|795176_796328_-|lactaldehyde-reductase
MVNRMILNETSYFGTGAIAQIADEVKRRGFKKALLVTDKDLVKFGVAAKVTAKLDAAGLPYDIYDEVIPNPTIGVVERGIEHFKASQADYLIAIGGGSPQDTCKAIGIIINNPEFADVRSLEGVAPTRRPSVPIIAIPTTSGTAAEVTINYVITDEEKRRKFVCVDPHDIPIVAIVDPDMMMSMPASLKAATGIDALTHAIEGFTTKAAWELTDTLHLKAIEIISRSLRDSVAGKPKGVEEMALGQYIAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHIMAYNADYTGEKFRDIAVAMGVNGATDMSIAQAREAAIHAVRQLSHDVDIPPRLRDVGVREEDIPALAQAAFDDVCTGGNPRDTNIDDIKALYQSIY
>NZ_CP024956.1|WP_011092348.1|793430_795110_+|acetolactate-synthase-AlsS
MEKSTEKQSWSSGAELIVKHLEAQGVKHIFGIPGAKIDRVFDELEDSTIQTIPVRHEANGAFMAAAIGRLTGKAGVTLVTSGPGCSNLVTGLATATAEGDAVVALGGAVKRADKLKLTHQSLDTVSLFQPVSKFSAEITASSAISEVLANAFRAAESGRPGAAFVSLPQDIVNEPVISPVLACPHLPLLNGAPQSDIAEAAKLLRQAKNPVLLLGLMASQQENAQALRRFLHHSQLPVTSTYQAAGVIDQQQFNHFAGRVGLFNNQAGDKLLQQADVIVTVGYSPIEYDPSLWNNGKATLIHIDVLRAEIDSAYRPNIELLGNIAMTVDTLNACISEPFILSSGTQAVLQDRQRQRHDLSTRAINMTGFAIHPLRLVRAMQDIVNEDVTLCVDMGSFHIWLARYLYSFRARQILMTNGQQTMGVALPWAIAASLVQPGKKVVSVSGDGGFMQSSMELETAVRLKSNLLHIIWVDNGYNMVEIQQLHKYHRPAGVSFGPIDFKAYAEAFGAKGFAVESADELVSKLRQAMDVDGPAVIAIPVDYSDNHWLMENLNISVLV
>NZ_CP024956.1|WP_011092347.1|792626_793409_+|acetolactate-decarboxylase
MKTSIGEQSCEEAFASYAYDFRQEHADCVIYQTSLMSGLINGVYEGSRTMAELLEHGDFGLGTFNSLDGELVALNSQIFQLLSDGSARAARPEQKTPFAVMTFFRPTETIRFHRWTSREEVHRQIDEIVGTDNLFCALRIDGRFRCVETRTVPRQCRPYKPMQEAIEGQPTFHFEHRSGSVIGFRSPAYTQGINVAGYHEHFITDDRQGGGHILNYDVENGTLTFGVIAKLIIDLPQDREFLNADLSSENLNSVIKSVES
>NZ_CP024956.1|WP_011092357.1|804944_805769_+|phosphodiesterase
MLLAQISDLHFRSEGRKLYEFIDINGENAKVINQLNALSERPDAVVISGDIVNCGRPQEYQVAQRVLQMLDYPLYVIPGNHDDKQHFLNAMRPLCPQLGDDPENIRYAVDDFPMRLLFIDTSLTGQAKGWLTPSTLGWLEQQLQDHSTRETAIFMHHPPLPLGSAHMDRIACENGHELLTLIERFPQLTRIFCGHTHRLIMTQHRQAIIATVPGTVHQVPYFYYDDTSYYNLEPASIVMHRYVPVTGLVSYCQSIASNTGPYLYDPRISCPVDA
>NZ_CP024956.1|WP_011092358.1|805768_806857_+|ABC-transporter-ATP-binding-protein
MAVIQLRNISKRFEHMQALASLSLDIADGEFLVLVGPSGCGKSTLLRMLAGLEDVSDGQILLGDDDITTWSPKQRNFSMIFQNYALFPHLTVEQNITFGMRMRGEPKAEYPQRVQRVASLLQLEPLLKRKPGKLSGGQRQRVAMARAIVRDPRLFLMDEPLSNLDARLRSDVRDGIMDLHRQLKTTTVYVTHDQIEAMTMADRIAVLDRGVLQQVGTPEQLYSYPANVFVAGFIGTPAMNMVTLVCSEGHAFLQALPVVLPVSEETRSLTSVLLGIRPEHITEHAASDGDLSLSGTVKQRELFGAEYLIHVDTPLGNIRYRRPNRDGVPNIGASVVLHFSPQDCHWFSGQTARNLSQEKRNA
>NZ_CP024956.1|WP_011092359.1|806849_808157_+|ABC-transporter-substrate-binding-protein
MRKPRMMALAIALLMSGPVLAKENIDFMFPAPVDGKLTMEMTRIIKEYNQSQDQVEVRGIFTGSYDTTKVKAEAAAKAGDPPALVIMSANFTADLVIKDEILPMDELFKYGNEKATPFLTKNFWPALHQNAQVMGVTYAIPFHNSTPILYYNEDMLKKAGFNEPPKNWDEVAAVAKKLTDPAKGQWGIMIPSTNDDYGGWMLSALTRANGGAYYNADYPGEVYYNTASTKGALQFWRDLVYRDKAMPAGVLNSKQISAAFFSGKLGMAMLSTGALGFMRENTKDFSLGVAMMPEKERRGVTIGGASLVSFKGISEEKKKAAWQFMNYLVSPEVSGSWSRFTGYFAPRMAAYDLPEMKDYLAKDPRAAIALSQLQYAHPWYATYETVAVRKAMENQLAALLNDPAKKVDDAAAAAQKEADGIMKPYVDKTALRDVK
>NZ_CP024956.1|WP_039296915.1|808183_809446_-|MFS-transporter
MPTTSCYYKNNRNFWIFGAFFFLYFFIMATCFPFLPIWLSDVIGLNKTDTGIVFSFLSLFAILFQPFLGILSDKLGMKKHLLWVISVLLLFFAPFFLYVFAPLLKINVILGALVGGLYIGFSFSAGAGAIEAYIERISRQHHFEYGKARMFGCFGWGICASTAGMLFNINPDIVFWMGSGSAIILIVLLCLAKTESNPTAAVMDSLGANTSPFSVKLALGLLANRQFWLLVLYVVGVACIYDVYDQQFANFFKSFFNSQEQGNQIFGFVTTAGEAANALVMFCTPWLIGRIGAKNALLVAGTIMSIRILGSACATSITEVIILKMLHAFEVPLLLIGIFKYIASTFDSRLSATIYLVGFQFAKQFMAIFLSSAAGNLYDRIGFNQTYLILGGIALTFTAISAFTLSSSRSTTNMHSQVPR
>NZ_CP024956.1|WP_039296917.1|809540_811685_-|alpha-galactosidase
MMRDIVQLTSAQCDVIVRCSPAAEILYWGPRLRGFSPQDIVSLQRPVANGRLDVDLPLTLAMEYGRGQFGSPGIEGHRSGYDAAPIFTTTQVDVQDNTLTITADDTQAGLRLTSELRLDPQTDVLQLRHTLQNLRADAWQVQRLAVTLPVPERASDVMAFHGRWLREFQAHRLTLQHGGFIQESRRGRSSHEYFPALILGEPAFSEQRGAVWGVHLGWSGNHRLRADIKTDGRRVVQAEALYLPGEITLAQSESLTTPWVYAAFSDTGLNGMSQRYHSFLRQSLIQFCGDKPRPVHLNTWEGIYFDHSPEYIMQMASKAADVGVERFIIDDGWFRGRHHDRAALGDWYLDEEKYPNGLMPVIEHVKALGMEFGIWVEPEMINPDSDLFRAHPDWVLQLPGYKQPTGRYQYVLNLNQPDAFAYLLERLSWLLGEHPVDYVKWDMNRELVQPGHEGRLAADAQTRQFYRLLDTLRQRFPHVEFESCASGGGRIDYGVLERTQRFWVSDNNDALERQTIQRGMSYFFPPEVMGQHIGHARCHATYRRHTIAFRGLTALFGHMGIELDPVKADDDELEGYRHYIQLHKTLRPLLHSGTTWRVEMPDDTVQVTGVVSRDRQHAVFQVAQLHMPDYSLAGTLRFPGLLPDARYEIKLLDGPEIKTVREGGGTMRELPPWLRQPLVVSGDWLMQAGLALPVLTPETAILVELSAVPESASS
>NZ_CP024956.1|WP_039296919.1|811904_812909_-|LacI-family-DNA-binding-transcriptional-regulator
MSLKTIANNLGLSVTAVSRALNGHRDISEATRQRIQEEAERIGYRPNTHARRLKMGKSDAIGLVYPYASSLSNDIFFEMIGAISSKLAQHDVDFLLLADEQDACQGAVRLITSHRIDALIVAHTCEQDARLMLLQHHKVPFLALGRSQLSHPYAWFDFDNRAGMSLATEHLITLGHRRIAMLSEDHPQAFIMQRRQGYRDALQRHNLPFHDDYLRGVDPTRRAGYQAMLDLLALPEPPTAIVMDGNVHGDGAVAALQQAGRLSGPHPIALVMYDGLPQDSLTDLNVTAIEQATREQVGEQIASMTQALIAGEAVENLQVLWQPTLRIGKTSFPA
>NZ_CP024956.1|WP_011092363.1|812962_813571_-|HD-domain-containing-protein
MSSSPSTLNFGSMTDVFGFLIEIDKLKSVQRRTKIIGSERHEDSAEHSWHFAVAAMALAPYAGEGVDIQRVIQMALIHDIVEIDAGDVIVYDLSARLAIHDQEVAAAARIFGLLPEPQRQQFQDLWEEYEANETPSAQFALVLDRVMPMLMNLYNGGQSWVENGIRLEQVLDRAEFIATINPELWQYMKQHLEDAKAKGWLL
>NZ_CP024956.1|WP_039296921.1|813989_814637_+|hemolysin-III-family-protein
MSKNAQMSDYSLAEEIANSISHGIGVIFGIVGLVLLLVQAVNNDAGSVAITSYSLYGGSIILLFLASTLYHAIPSPRIKPWLKKFDHCAIYLLIAGTYTPFLLIGLDSPLAHGLMVVIWSMALFGVIFKLAFAHRFEVLSLITYLVMGWLSLVVIYQMVMKLSAGSVTLLAVGGVVYTLGVIFYASKRIPYNHAIWHGFVLGGSVCHFLAIYLYI
>NZ_CP024956.1|WP_011092365.1|814860_815862_-|tRNA-modifying-protein-YgfZ
MVNQHTAHQLPFASQLPFASTQLAATLISLDDWALATLVGPDTVKYLQGQVTADVGALPDNGHILCAHCDAKGKMWSNLRLFHHGEGFAFIERRNLRDVQLSELKKYAVFSKTAIAPDDNTILLGAAGAGIRELLASVFSQLPDAEHPVVQHEGATLLHFAHPAERFLLVLSPEPSASLLEQLGDKVSLNDSRQWLTLDIEAGQPIIDSANSAQFIPQATNLQALNGISFSKGCYTGQEMVARAKYRGANKRALYWLAGKANKVPQAGDDLELQLGENWRRTGTVLAASQLQNGDVWVQAVLNNDLNAENTLRVRDDADSQLTVQPLPYEITD
>NZ_CP024956.1|WP_011092366.1|816097_816364_+|FAD-assembly-factor-SdhE
MEIDNKSRIHWACRRGMRELDIAIMPFFEHDYDTLNDSDKRAFVRLLQSDDPDLFNWLMNHGEPKDGELKRMISLIQTRNKDRGPVAM

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Crispr_ID: NZ_CP024956_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_4

884515-884622

Orphan

Consensus_repeat	Method
AGGGGAGTGGGCAGGGATAGCCCACGATAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024956_4

>merge|NZ_CP024956|4|884515-884622|CRISPRCasFinder
AGGGGAGTGGGCAGGGATAGCCCACGATAAAAAAGAGCAGGAGCGATTTTCAACAACGCGTAGCGTTGGCCCGAAGGGGTGTGGGCAGGGATAGCCCACGATAAAAAA

>NZ_CP024956|4|4|884515-884622|CRISPRCasFinder
AGGGGAGTGGGCAGGGATAGCCCACGATAAAAAA	GAGCAGGAGCGATTTTCAACAACGCGTAGCGTTGGCCCGA
AGGGGTGTGGGCAGGGATAGCCCACGATAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_051122327.1\|882790_884494_+\|rhamnogalacturonate-lyase	unknown	unknown	gnl\|CDD\|199907
NZ_CP024956.1\|WP_011092402.1\|862562_863414_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP024956.1\|WP_039297575.1\|878184_878943_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP024956.1\|WP_039297431.1\|891884_894254_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|236643
NZ_CP024956.1\|WP_039290067.1\|863966_864599_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP024956.1\|WP_100675188.1\|887877_889839_-\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP024956.1\|WP_039290069.1\|866468_876164_+\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP024956.1\|WP_039297440.1\|894939_895887_+\|DUF4880-domain-containing-protein	unknown	unknown	gnl\|CDD\|236622
NZ_CP024956.1\|WP_011092414.1\|887440_887752_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_CP024956.1\|WP_011092415.1\|890741_891134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_039297443.1\|896069_897080_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP024956.1\|WP_039297577.1\|878939_880298_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP024956.1\|WP_100675187.1\|864778_866410_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|379164
NZ_CP024956.1\|WP_039297580.1\|880300_882430_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379183
NZ_CP024956.1\|WP_039297572.1\|876418_878185_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP024956.1\|WP_039297437.1\|894418_894943_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171561
NZ_CP024956.1\|WP_039290066.1\|863413_863974_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_011092422.1\|897923_899450_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_CP024956.1\|WP_011092413.1\|885785_887444_-\|cation/acetate-symporter-ActP	unknown	unknown	gnl\|CDD\|236495
NZ_CP024956.1\|WP_039297446.1\|897231_897849_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_051122327.1\|882790_884494_+\|rhamnogalacturonate-lyase	gnl\|CDD\|199907	cd10320, RGL4_N, N-terminal catalytic domain of rhamnogalacturonan lyase, a family 4 polysaccharide lyase. The rhamnogalacturonan lyase of the polysaccharide lyase family 4 (RGL4) is involved in the degradation of RG (rhamnogalacturonan) type-I, an important pectic plant cell wall polysaccharide, by cleaving the alpha-1,4 glycoside bond between L-rhamnose and D-galacturonic acids in the backbone of RG type-I through a beta-elimination reaction. RGL4 consists of three domains, an N-terminal catalytic domain, a middle domain with a FNIII type fold and a C-terminal domain with a jelly roll fold; the middle and C-terminal domains are both putative carbohydrate binding modules. There are two types of RG lyases, which both cleave the alpha-1,4 bonds of the RG-I main chain (RG chain) through the beta-elimination reaction, but belong to two structurally unrelated polysaccharide lyase (PL) families, 4 and 11.	4.90899e-84
NZ_CP024956.1\|WP_011092402.1\|862562_863414_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.84432e-12
NZ_CP024956.1\|WP_039297575.1\|878184_878943_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.68884e-27
NZ_CP024956.1\|WP_039297431.1\|891884_894254_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|236643	PRK10044, PRK10044, ferrichrome outer membrane transporter; Provisional.	5.49241e-143
NZ_CP024956.1\|WP_039290067.1\|863966_864599_+\|hypothetical-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	0.00065811
NZ_CP024956.1\|WP_100675188.1\|887877_889839_-\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP024956.1\|WP_039290069.1\|866468_876164_+\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	4.4777e-24
NZ_CP024956.1\|WP_011092422.1\|897923_899450_-\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	3.93873e-117
NZ_CP024956.1\|WP_039297440.1\|894939_895887_+\|DUF4880-domain-containing-protein	gnl\|CDD\|236622	PRK09774, PRK09774, fec operon regulator FecR; Reviewed.	1.24941e-55
NZ_CP024956.1\|WP_039297443.1\|896069_897080_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.75637e-12
NZ_CP024956.1\|WP_039297577.1\|878939_880298_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.67592e-18
NZ_CP024956.1\|WP_100675187.1\|864778_866410_+\|pilus-assembly-protein	gnl\|CDD\|379164	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like. This is an N-terminal domain on a family of putative Flp pilus-assembly proteins. The exact function is not known. The Flp-pilus biogenesis genes include the Tad genes, and some members of this family are putatively assigned as being TadG.	8.81676e-06
NZ_CP024956.1\|WP_039297580.1\|880300_882430_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379183	pfam13437, HlyD_3, HlyD family secretion protein. This is a family of largely bacterial haemolysin translocator HlyD proteins.	1.60279e-18
NZ_CP024956.1\|WP_039297572.1\|876418_878185_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	4.49178e-12
NZ_CP024956.1\|WP_039297437.1\|894418_894943_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171561	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional.	5.85434e-55
NZ_CP024956.1\|WP_011092414.1\|887440_887752_-\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	1.64331e-44
NZ_CP024956.1\|WP_011092413.1\|885785_887444_-\|cation/acetate-symporter-ActP	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0

>NZ_CP024956.1|WP_051122327.1|882790_884494_+|rhamnogalacturonate-lyase
MLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKATFGEDGSAVSMVTGGKNIVTNLSGAARDPSKARSAYLDYYVNNGNGYVKGVKDFTPERVEVLRNDREMAHVAYIDDRDGLLKLEYHLIMRRGVSGLYSYVVAENSGSQDVNVSELRNVYRFDPARLDHLYSGVRQGKPLLYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRTAPFWGVFGNGVGAWLIHGNREYFSGDALKQDLLVHQDAIILNYMTGSHFGTPDMAAPPGWKKFYGPWLLYINQGDTEQMLADAQRQALTETVSWPYKWVSDSRYPIDRTQVSGRVASQQPVTVVLSSSLDEPFDVQTRGYSYQAMTDSQGNFAIPHVRPGNYHLSVYANSGTQPGILAEQALSVSGDKQVLPMITLPKAESVVWAIGQANRQASEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQPEKKTYFLNIALAAASNSGMSEPTVPQLAVMVNGTTLETLTYDNDKAIYRGALQSGRYHVARIPVSSGFLKNGNNTITLQLKGGSVMYDVVTLSEE
>NZ_CP024956.1|WP_039297580.1|880300_882430_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MAGGATPAAGLSPLRDELILHTGPANRDGSPSWTLEDPLRGLYFRIGWAEMAMLSRWSMGNAAQIVAEVNQTSALTLDDSDVQYFNRFLQANSLTRVSGDEALAQFTRQVEQSRVSIWRKLLKNYLFFRIPLWHPDRFLGATLPWITPLFSRTFLKLTLLVAVLGLFLAGRQWETFKHTFLHFFTLEGAALAGLTLCFTKILHEFGHAYTCKRFGARVATMGVAFLVMMPVLYTDTSGSWKLTRRRQRMAIGAAGMMTELVLAAWATLAWSFLPDGMLRSAAFMLATTTWIMTLAINLSPLMRFDGYFLLSDGLQVPNLQNRGFAIGRWQMREWLFGLGDTPPEHFPRWLQRTLVGYAFAVWIYRFFLFTGIAILVYHMAFKLLGMLLFAIEIGYFVVMPVVNEVREWSKRRKDYRMNRNMTTTLAVSAVILLLLMIPWQRSVYAPALLRAEQQSSLYMPVPAMIQHINVQVGQTVRAGQALFTLSSDALAHERQQLERQIATLNWQSTFQVFNKEAVGDHQRVKQEHEAALQKLQVLQRQSEQLTVRAPIDGVVADMATPLETGEWLGQGEWLAVVTKPTGGLVEAFVSEKDWQRLSTGGKGTFYLQDVSRASLPLTIVEIASTATRDLNAAPELASVYGGDIATLSDSQRKLHPEQAVYRVLLSLPADYRAQPQVLRGTVVMDGEAQSLLIRGWKVVSAVLIRELSF
>NZ_CP024956.1|WP_039297577.1|878939_880298_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MTDRNTTAAAPTEQDTRLALLAELLQLQSRARARETLDELAFFIVNETHNLVKYRQALLWDCDKWRLQAASGLASLDHNAPFCTEFSRLCRQWQEEGRQTEVLQCRELPADDRVLWQEHLPEFLLWLPLRVAQGDAPLVLVLARDSAWLPAEIVLLEKLADAYAHAWSSLCKVRRRPSKTPPARRRLILAAAIALVLILLIPVRQSVLAPAEIVAHRPVMVRAPVAGVVDDILVRPNQTVSANQPLVRLDVRELENRLESARQSFATADAQYRQAQQQALFDANSKASLAVLQSRREQAQSDMDFLQRQQERMQLVSPRDGVAILDDASDWIGRSVAVGERIMMIADPHDVELEIQLPAADAIALENGADVRLFLNVAPNSAQEARLEQIGYRAAPTPDNVMAYRLRARFTQDDPLLRVGLKGTAKLYGKRTVLFVYLLRKPLASVRVWLGV
>NZ_CP024956.1|WP_039297575.1|878184_878943_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MAVGMMRPLLLVSALSLPLWGQAATTGDIRVQLSAQRYTVLSSEIAGKVTDIAVKEGEHFKQGDTLVTFDCTVLREKLNYSNAAENAARKKLAIADRLDKLNSISLSDVDQARSSVSMAQAESGVNRAMLQRCAIKAPFSGRVTETKVKRWESVAEGKELLAIYDDSAFELEMIVPSRWLVWLKQGSAFQVTLDETGLSYPAEISRLSSAIDPVSQSVKAFGRITQSTAGLLPGMSGVAQIAPPDAAGSVSP
>NZ_CP024956.1|WP_039297572.1|876418_878185_+|TolC-family-protein
MNQHIAHFWDSQQHDSQQQNVQREATPRSAGSRALRIAVTLACLGLAGCAVKPEPVTVEQQVAQALSDRTQMFANQEPVRGTITLDEAIARALKYNLQQRVALLEQAMEDDLLGVQNLDMLLPKLTARAGLQTRDNVAGSSSESVTTGRQSLEASTSQDQTMRTADLTMSWNVLDFGISYFNAKVQANKSLAAEERRRRVVADITRQVRTAYWEAATAQRLQPEVTTSLTQARQALEYARQTEQQRLLAPVEALRFQKNMLEMVRQLEIVDSDLVVAKSRLASLMNLPPSSKYDVVVPSESSLVAPKMAYSLDDLENFSMVKRPEVREENYLARNSVLETRKSLLRLLPGVSLFAGINGDSNSYLVNHQWANAGVQVSGNLLNVLSWSSVKRAGQANEDLAEVRRQALRMAVLTQVNVAWQEYQQSTRMFGRYQELARIQRGILNQTTLSVQHRAETQMEQVRVSTETILTTRARDRSFADVQNSLGAVYQAAGLDVLPDNVNDVSLAALSSSITRTTGNLEKGGVAVPRLSLSTPATTTASTVIAPSATKPITPVAVTPSANAGKPYRVVNTDMWDNLQSLQAGGSR
>NZ_CP024956.1|WP_039290069.1|866468_876164_+|beta-propeller-fold-lactonase-family-protein
MTFSRSKSGSALTRTPRQAWVLEPRMMFDAAAVVTAVDVAAHVAVAATDSAPGVDATPVKATVTITDSSDSFAPIDLFSGVSVSADNGGQELKDLVITVNRTGANQAIVIDGTDITLEAANGAKTTAGDGQYSYTVAVSGATTTITVSIESSADAFEPTDVAKLIDGIAYKPLDKTVAGGDVTVTLKSLSDDSDTADLNIHATITVDSKINVAPVVSASDAPELAELIIVPGMESPQDVRYSNNGERAYAIGIDGTLGVFTVGEHGKLTLSQTLSDISALKDVKDIALSADNRSLYAITGDSNIVALSLDDNGQIIRLSGSDELPVYTQTIAVQNGNITGLAVSSDGTQVYVTTQWNGMIVFTRDATTGSLTFFQRVNESGIDRSGIVASSGNYVVTMGMGAKHTLSVFQRSETGTLTSVATLETSGEGYGAVDYQLTISKDQQFIYVADPDSGEISVYQLRDGTEGKTLTRTDTKTLEGVNALYLNADGSQLYALSSEGALQIYSVNASTGALSESGQIKDIGDTRGMVLSPDGQSLLVAGEAIQRFSALRTYLYGSDLPFADHIALSDSNLDVLNGGAGNYNGATLTIGRETPSADDQFGLSAGNSLTLQDGKILQAGAEIGTFAQSQGTLSVTFTADVTKETANAVLKQITYHNVGSQSTTDAVVLTVTANDGELNSTVTTVALLLTANSAPTLVSQGGSNLTLDTRGASVTLFKDTAINTGEAGQALTKLSIGIDGLNNPHQEYLTVDGTVIDLSKDSSGTTVSGYQYSYTYNALSDESSLVLSHAQGISSMAMMKLVDGLSYSAGKESTSASGLRTITLTELQDNGGTANGGSDTATLLVSGSVNLAFNELPTIEATYSPDAALFYNDGKLSDYNERVSAIGVSQDGKTLLVTGSEGNNNGGKTYLRVYARDAETGKLTLLQSFTQGEQDDPSTPVIEVNGLNTLTTLAQSKDGSSVYVAGGSGSAYSLVQFSRDATTGQLSYVGIVATQDVNGVSGLDAAVSEIVVSDDGTSLYTINGVTPVDGSTGKNAVTFFSRDTTSGALAFVGSLVGSDTIPLKSPSGIVLSSDGKSAYISNLGNNSITVLSRDADTGSLSYVTTINKSTIAADTNSADIPKDDRYLTALQDIVISPDNRFVYVSSNTQGTVSIFSRDGDTGALTYAGTMDLYNSESHVPAELRATSLREIILSQDGSALYVAAFGGKSLLVFARDADSGALTYRNSVELSVATVNHLAVSADGKNIYAGVSTFFAGLNVFTAAANAPYSQTADVPFATGVTLSDQELDAADDYKGASIVISRNGEASANDHFAFQNGSDLTLSGSEIQYQGATIATFNVSDGAVSIVFTESATKAVANQVLHQITYRNDGDTAGASIPLKITLSDGAKDTSLLLTLVENKAPIVDNVGYVPPSGTAGQSYSAVLPENLFRAPENGALTWRVNGLPDGLTFDSTTRTISGTPALNGAGAFTLTVIVTDESGAEAEQTLTLTMTSVLAQMPVIGGESSALQNDYGLDGYDSNSYVDVLSGVKDSALAADGKTLYVVSSPEGGSAVLSIFVRNEEGKFTLSKTFFNYRSVYNDETGQNDNVVDNAGLAGASDVILSADGQYLYVVGSEGNAVTIFRVGSDGELTQAGVLDSAELDGRSLDVRSHIVSQGDYLYLTAAQSDSDTDARSVLVFKRGVDGSLTSVSQTDNLIGASRLVLDPTGRYLFVSGSGGTVGVTAFSIDAQGALSQVGQISGTSEYDINGLALSPDGKTLYAINADGIQYTLNTITVGADGALTLTDTTPITDDGGDTGEALATSLVVSADGTSLFVIGKNISVFSRAEDGSLTLKHTISGSWDSPLNISFSDLQNVELSADGKQLYLIGGDKIHVLNVGTASATYTEDTDATVLLPSGRLSDPQLDALNNGAGNYSGASITVGRQEGGLPEDIFGFKAYNGLALDGNNIVKDGTTIATFTQADGVLTVTFTAVVTKADAQNVLRQITYHNTSPDPEHAGSSPAFTFSINDGDNNVATMDVTVNLVGVNDPAVLNTTVLNPQIPGNGEFVKLFKDTHIDTVESGQTIWQVVLTFDVSGPNETISVDGSTIVLEKSNGTPRTASGLQYSVEVKDGKATVLLYVGKDGSGTAEIIDSIGYNYLGSESSGERHVTLMVKENNYSGSAPETTLEQTITLTLVPAAEANTAPVITVPATTPAYTERAEPVVLAPDATVSDAQMDKLNDGKGNYDGATLKITLGEGKTALDKLSLGAGNSLTLSGDTLQKDGVAIGQVSNKDGVLTIHFNSNAGTIPTTEDVQNTLRQITYASDSHTPAAQVAVTVTLSDRYLVSQITALSVAITAINDTPVVANDPVLSADELRLVNAYTAITGLGTVTAAARTADGLAVYVSDDKGAIALFQRDANSGELTYVRTFSAVDGVQGISQLQVSAEGNSVYALRADGNAIVWFSRDAEGNLEHKETLNEGETNRFEGNLWDVKNITLSEDGKTLYVINNYNLLWFSRDAATGKLDYVGLIEGGMWSEPYLWQPSELVSRGNLLFVTTNTSSGSSLIVYTRGDNGEPTLLGYTRDFIDASDNTVQLSGLEQITVSADGRSVFVASAGQIDAFALDTATGTFTHLARVAAEGSVSDIALSADARVLYVTKDDGSLTRYVLNDQALIALDTQVSGGAGFTHLLPVDGSLIAAGSGVTALGESSRLPVYRIDGSAVIVAPAIILNDAELDASNGGEGNYQGASITLQRGEAASASDRFDFSAGKGFTLANGVISQEGQAVATFTQVDGKLTVTFTAAISRADATTLARQISWATSAPLTGNAVSLTLVFNDGEADSTAQTLGVTLLRESNLPPVGHAEQFTPPAAQVGTRWSYSLPDSLFSDAENDALTLSINGLPNGLTFDAATRTIGGDPTVSGTFNLTIIATDSVGNVTALNVALTVNTASTPVDPGTPVDPGIPTEPVNPDNTTTAAPVILVQQGVSLPVDSNERDREQPLSAIVADLSRPDVQPLPTNITAEPVRQRDADTARQSDAPWVLDPVMSQLMPTLDQVNFSSRASTVVRDSTAVSPADSNLFLSVRGQTTALESAFSSVQGALRPDASGALAFSLPQRMFSVREGNATLTLQLANGRPLPAWIQFDARSGVVRITDASALQVNQVQLALKAQASDGTSRTVPITLQTGQGDGAAMPTDHGAMQSPSLPIENWDVERLAPAGKTAFTEQLRQHQPEQDELLAALSELSSLRT
>NZ_CP024956.1|WP_100675187.1|864778_866410_+|pilus-assembly-protein
MKKTLQNRSVKKDDTGITLFLRERLSAFVHQEKGAGTAFYALGAMALLVTAAFIVDTSTATGDATQIKRATDAAALAVGHQATINGEEYSQEDTNKLAYEYVKNNLGMNKALSEKLVASDVSVTEGRNSATRKTYTVTAAFETKPSLLSLGAKKQEVYSTSEVINRPTEIALVMPVTGDMSEGDIRSLKSVSRSFVERMLSSADGKRDNLWLSLVPYSQSVNVYDAEDANRIRRWSTPSALNPPELRSLFASGVVSSLADRRFPDRRANLLCMYRGLGREGNFFWDEPPAGQFSIYYRHDLPQNGSPGAPPISWRGPNPDLYPWDNNSNAVDTRFIVADRGCPNAALMPLTNEESRLNQRIEQFSARFNVNYAIGMSWAGAALSPNMRGSDGWGDAKLPLDFNLDGNGDGQKVIVMMANTIGNWFDTDGYNFKRNQFSGSTGSDVAREFAQQRFRDLCSSFRARNIKFYFVGIRPGDPEDFGRNLFDTEATPGLLVCTEGEKRMSFIDGSGFGAEGVEDQLIQRLDRIAGQIETEGGYVRLVE
>NZ_CP024956.1|WP_039290067.1|863966_864599_+|hypothetical-protein
MTDRLLKTSHVLKNNRFLSGLRRFWFSRRASIAVETALAFPIVLAIGSLCADLYTVGLERTRMEQRAGAIASILAMQQKLDEKGLKGLLDTILPTEGAGNYQLLISNVRQTGELYWQLSRGTAEALCVDSETLPGEEYLPELPERDREEGSKTTSMIVVEICRQGKDVSLLGGMSLGGLLHASSVSRVAINVVELDEVLRKEARLEEEDQ
>NZ_CP024956.1|WP_039290066.1|863413_863974_+|hypothetical-protein
MVWLRNRDPWRKKGIMQGIVPHHERNWRSTRGVIATEVAFLVPVVLVGVMMLFELARIGLVIAVGSAALDKAVQTFRLDNLVTDSAEQMGTRLKARMVEAGYGYLKEDDLTVSVLHFDNLTQLGGLTNGNSSQDNPNGEETTTLPVWSVTVQIKKAFITPLPEVLTLGDTFRYQYKHVFGTELRND
>NZ_CP024956.1|WP_011092402.1|862562_863414_+|tetratricopeptide-repeat-protein
MVDLVAKLKRGAPMLALLIVSTVLAGCSSSTAIKGSKDEGLRLARLLRDQGRVEAATEVYARLDSRDALKGAEMLEYASVAALARSPQQTLELYGRARQALGGDTNKMTPGEALAVCLGMGRTQLALGRNAMAQTDFACALKAQPNDAGALNGMGVVMDASGKHAEARQLFEKALQVNPADVAALNNLALSWLASGNTDKAISLLRSVDESNATSRLNLALAYLSGGRDDEARSALATIAQPQRIDGLMDELNQRLQQMQKDKSRGEALLLSSRQRLQLSAPE
>NZ_CP024956.1|WP_011092413.1|885785_887444_-|cation/acetate-symporter-ActP
MKIRFMMLFGLLTLPVLAWAADALTGDVQRQPLNIQAIVMFLLFVGGTLYITYWASKKTRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVYTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQNPIRSLSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHVAVVLVGILMVMYVMFGGMLATTWVQIIKAVLLLFGATFMAVMVMKSVGFSFDALFKQAMEVHPKGAAIMSPGGLVSDPISALSLGLGLMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFMGYFYFLTFIIGFGAILLVSANPEFKDATGALIGGNNMAAIHLADAVGGNFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYSNVIKKGKATERDELKVSKITVLVLGVVAISLGILFENQNIAFMVGLAFSIAASCNFPIIIISMYWSKLTTRGAMIGGWAGLLTAVILMVLGPTIWVKILGHAAPIYPYDYPALFSMLVAFIGIWFFSITDRSETGQQERARFHAQFVRSQTGVGASKGSSH
>NZ_CP024956.1|WP_011092414.1|887440_887752_-|DUF485-domain-containing-protein
MNDAIYQRIESNPLFRELVNKRQRFAAFLSLIMLVLYVGFILLIAFAPGWLGTPIAPDSSITRGIPIGVGLIAISFILTGVYVYRANGEFDRLTKQLLDEVKQ
>NZ_CP024956.1|WP_100675188.1|887877_889839_-|acetate--CoA-ligase
MTQHNKHAIPASIAENALINAQQYENMYRLSVDDPAAFWGEQAKIVDWIKPYETIKNTSFDPGHIRIRWFEDGTLNVAANCLDRHLAERGDQTAIIWEGDDATESKKVTYRELHQSVCRFANVLKSQGVKKGDVVAIYMPMVPEAAVAMLACARIGAIHSVIFGGFSPEAISGRIIDSSAKLVITADEGMRAGRVIPLKKNIDEALKNPNVTTISSVIVFRRTGKINEWQDGRDLWWHDLVEKADDHCPPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPTWPDASRMAQVVDKHKVNILYTAPTTIRALMAEGDKAIEGTSRESLRIMGSVGEPINPEAWEWYFNKIGNGKCPIVDTWWQTETGGFMITPIPGAIEAEAGSATRPFFGVQPALVDNLGNPQEGISEGNLVIVDSWPGQARTLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHHMKGQAIYAYITLNHGEEPSSELYTEVRNWVRKEIGPIATPDILHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAMSTASQ
>NZ_CP024956.1|WP_011092415.1|890741_891134_+|hypothetical-protein
MSLIFGRNEILGMLSQPVQNDRRAVAVIDEKCKVVCANSAFNAHFGLRAEMNTPVSIDDVLPINVKFAYHDFMTNSNVLSTRVVSDLLSDGFTKKQLSTLSFSKLNVENRVLSLLILNQDAVEPSTNLAS
>NZ_CP024956.1|WP_039297431.1|891884_894254_+|TonB-dependent-siderophore-receptor
MVKFRTHLLARILRAGVLGASFASVLPMAAVYAASAVSVQQYAVSSGPLNQVLNQFAQQAGVLLSYDPALVAGKRGAGLQGNYNIEQGFQQILSNSGISAQYSADGSVTLVQRTTSEPVPVSAPVVAKNDRIVVNAPPNTAMKLDVPVSETPRAVAVVTEKQIEERGAQKIDQALRYSSGILATTYGPDNKAEWVTIRGFSDQSRFQNGLATLNEDGFYGQQIEPFGVERIEVLKGPASVLYGQNPPGGLVNVITKRPTRLPQGKVELEYGSNDYRHLAVDSAGPLNDDGSVLYRVVALARDTSGEMDFSKSKRLYLAPSVTFLGEDTELTVLASYMDTNSDTTNGFKLPYGTLHGTPFGKVGYKTSLGEPGMNRHDTRQFNLGYEFTHHLNDTWTFHQNLNYAYLNLDLRNAYALSMADARQANRGLTYRDGFAQNWATDNRLVGEWQWEDIENTLLLGFDYRRANAQSRDGNLYSFGAPIDIFNPVYGNYASPDSQLFDHRSGRHQTGYYVQNQIKYDERLIFLLGGRYDVAKSRDRNLSSGEDTRTDDTKFTKTAGVMYLFDNGISPYISYSESFLPVSGRDGYQRPYVPEEGQQTEVGVKYTPEGFNGYASAALFNLEQKNVKTTDPKNPNLTIQSGEARSRGLELELSGEVYTGLTLTANYTYNEVETTKSGSVGEVGKRLPGLPEQIVSGWATYAFNGKLGGLSIGSGVRYVGSSYGDIANTADMKVPAYTLWDAMIAYDFSKDWRLQVNATNLANHEYVSACNYWCYYGEGRNVSANVSYRW
>NZ_CP024956.1|WP_039297437.1|894418_894943_+|sigma-70-family-RNA-polymerase-sigma-factor
MKSPAAACPHQPEILNVQQIYHDHHSWLQAWLRRRLGCSQQAADLAQDTFLRLICQHQTDNIREPRAWLTTVAHGLVVNHWRRKDIENAYLQVLVEQEFNFSPSLEQQAIVVEALLAIDQMLAMLPVKVRQAFLLVHLDGLTYRQVAEQLAVSERMVKKYMAQAMLNCLLCQDL
>NZ_CP024956.1|WP_039297440.1|894939_895887_+|DUF4880-domain-containing-protein
MISSITSSIPKDVLYAAAEWYATLYDEDCSENDRQTWQRWLHEDETHRLAWQQVEQIHARFHAVDSQLASSVLSRRGEERRRMLKLLVIASVTGGVGFSLPWDSYAADYRTGTGETSELSIETGMTVWLNTDSALNQQGSPALSQPLTFQLIKGELMLDNQTAHAARLTTPHGDLAAAAHSCQLALRYTSAHSVLSVFSGEVLLQTAVPAAQRVTAGQQVIFTRDRCREPAPVENFRQSWRKGLLVADSMPLGQLINEISRYHNGYFHVDSAVSNLRISGVFPLHETDRLLDAIVRTLPVKVSRRFSWWVDIRPS
>NZ_CP024956.1|WP_039297443.1|896069_897080_+|AI-2E-family-transporter
MQLLNLKQARLLSFFFIMGGLFILLPLRLLTCFIAGFLVYEIVNLLTPYFQRVISGKRARWIVVAVISTLVVSLLSLLFGSLVGLLMQEMKDTAAFNIRIGYILNDIQQQIIHYLPGYLPVSIEELQHEFLQWIQAHIVMLQNMGRSFLHGFVTMLIGMVLGAIVSLYNVDPDTEKPLLKAELLRRVSLLSASFRNIVFAQVKISAVNTSLSAIFILGALPLCGIHLPFAKTLVVLTFVFGLLPVIGNLISNSIVFLSGLSLSLPIALVALVYLMLIHKLEYFLNAQIVGTRIKAHAWEILLAMLVFEAAFGLSGVIAAPIYYAYLKSELKEAALI
>NZ_CP024956.1|WP_039297446.1|897231_897849_+|hypothetical-protein
MSKDVAVIIRRLGFALMLAVIVGLVLLALFIDVVVLNNAVGEISITEFSQEAFLLLTGLLFLRIAIRCRARRGGYLLIAGFFFCLLIREMDFFLDNIAHGSWFYFAILCAVVCIGYAAFSLNNTFAGLAHFLQHASYSYMVCGLLAVLVFSRLFGMTQLWGTLMDDGYIRTVKNVAEEGAELFGYTLCLIAGVLYTRSVNQKTKI
>NZ_CP024956.1|WP_011092422.1|897923_899450_-|MFS-transporter
MNKPISFKNTFCYGSANLLGSGALAISGAWLMYFYTTFCGLTLVQAAAIFSVASIIDAISNPIMGYISDNFYNTRIGRRFGRRRFFILLGAPLVLVYPMLWVEGFGFWYYLATYVLFELIYTSIMVPYETLATEMTSDFKLRSKLTGSKAIFGKIANFLAAFIPGQFIAVYGKDSATPFFYTGLVYGAIMSAAMIALYMTSWERPVNEIVRESTSSLWQAMKKLSVDMASTFRLRIFRKHLGMYLFGFGAEWLFASAFTYFIVFGLKQNTALVSHLNSFSSVMQLISTAAFIGICVKMGFARPFRLALMVVIVSVIAYAALYFANWSEDMTIFVLFAITAVFGLSTGGIYYIPWTVYTFLADVDEVLTGRRREGIYAGAMTFAGKMVRSVIVFAMGWTLSQFGFISGQSVQPESAVQAIVGVFSLGVIALALVAIYYTTQMKLDRKNHAILLEEIARIKAGGAIADIPAHARVVAEELTGWEYEKCWGNNPLGVQSEETKPQVATAQH

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Crispr_ID: NZ_CP024956_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_5

1448168-1448269

Orphan

Consensus_repeat	Method
CGGCGGCCCGAAGGGCGGCGGGCAGGGATAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024956_5

>merge|NZ_CP024956|5|1448168-1448269|CRISPRCasFinder
CGGCGGCCCGAAGGGCGGCGGGCAGGGATAGCCTGCCGTAAAAAAAACGGAGCAATTTTTAACGCCGTTTACGGCGGCCCGAAGGGTGGCGGGCAGGGATAG

>NZ_CP024956|5|5|1448168-1448269|CRISPRCasFinder
CGGCGGCCCGAAGGGCGGCGGGCAGGGATAG	CCTGCCGTAAAAAAAACGGAGCAATTTTTAACGCCGTTTA
CGGCGGCCCGAAGGGTGGCGGGCAGGGATAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_039290702.1\|1438750_1439773_+\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225911
NZ_CP024956.1\|WP_011092849.1\|1447019_1447487_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|181857
NZ_CP024956.1\|WP_011092854.1\|1451453_1451906_+\|DUF441-domain-containing-protein	unknown	unknown	gnl\|CDD\|225334
NZ_CP024956.1\|WP_039296214.1\|1451923_1454029_+\|tRNA(Met)-cytidine-acetyltransferase	unknown	unknown	gnl\|CDD\|224361
NZ_CP024956.1\|WP_011092856.1\|1454061_1455327_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP024956.1\|WP_011092859.1\|1458839_1459616_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP024956.1\|WP_039290704.1\|1440624_1441662_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP024956.1\|WP_039296216.1\|1445000_1445372_-\|arsenate-reductase-(glutaredoxin)	unknown	unknown	gnl\|CDD\|239332
NZ_CP024956.1\|WP_010283952.1\|1458402_1458825_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
NZ_CP024956.1\|WP_011092858.1\|1456873_1458238_-\|suppressor-of-the-inhibitory-activity-of-the-carbon-storage-regulator-CsrA	unknown	unknown	gnl\|CDD\|182922
NZ_CP024956.1\|WP_039296218.1\|1442858_1444148_+\|uracil-permease	unknown	unknown	gnl\|CDD\|236744
NZ_CP024956.1\|WP_039290709.1\|1445386_1446850_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|227122
NZ_CP024956.1\|WP_039296286.1\|1444247_1444955_+\|DnaA-inactivator-Hda	unknown	unknown	gnl\|CDD\|181224
NZ_CP024956.1\|WP_011092857.1\|1455393_1456839_-\|metalloprotease-TldD	unknown	unknown	gnl\|CDD\|182685
NZ_CP024956.1\|WP_011092853.1\|1450539_1451253_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|181800
NZ_CP024956.1\|WP_010307474.1\|1442015_1442642_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_CP024956.1\|WP_011092851.1\|1448463_1449342_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP024956.1\|WP_048018364.1\|1447539_1448088_-\|glycine-cleavage-system-transcriptional-repressor	unknown	unknown	gnl\|CDD\|236935
NZ_CP024956.1\|WP_039290703.1\|1439989_1440625_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
NZ_CP024956.1\|WP_011092852.1\|1449358_1450396_+\|outer-membrane-protein-assembly-factor-BamC	unknown	unknown	gnl\|CDD\|236955

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_039290702.1\|1438750_1439773_+\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	gnl\|CDD\|225911	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism].	3.35996e-143
NZ_CP024956.1\|WP_011092849.1\|1447019_1447487_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|181857	PRK09437, bcp, thioredoxin-dependent thiol peroxidase; Reviewed.	2.33531e-122
NZ_CP024956.1\|WP_011092854.1\|1451453_1451906_+\|DUF441-domain-containing-protein	gnl\|CDD\|225334	COG2707, COG2707, Predicted membrane protein [Function unknown].	1.48425e-50
NZ_CP024956.1\|WP_039296214.1\|1451923_1454029_+\|tRNA(Met)-cytidine-acetyltransferase	gnl\|CDD\|224361	COG1444, COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only].	0
NZ_CP024956.1\|WP_011092856.1\|1454061_1455327_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	7.63523e-33
NZ_CP024956.1\|WP_011092859.1\|1458839_1459616_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	3.31457e-48
NZ_CP024956.1\|WP_039290704.1\|1440624_1441662_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP024956.1\|WP_039296216.1\|1445000_1445372_-\|arsenate-reductase-(glutaredoxin)	gnl\|CDD\|239332	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.	7.90221e-57
NZ_CP024956.1\|WP_010283952.1\|1458402_1458825_-\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	3.8027e-34
NZ_CP024956.1\|WP_011092858.1\|1456873_1458238_-\|suppressor-of-the-inhibitory-activity-of-the-carbon-storage-regulator-CsrA	gnl\|CDD\|182922	PRK11040, PRK11040, peptidase PmbA; Provisional.	5.17321e-130
NZ_CP024956.1\|WP_039296218.1\|1442858_1444148_+\|uracil-permease	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	0
NZ_CP024956.1\|WP_039290709.1\|1445386_1446850_-\|M48-family-metallopeptidase	gnl\|CDD\|227122	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only].	0
NZ_CP024956.1\|WP_039296286.1\|1444247_1444955_+\|DnaA-inactivator-Hda	gnl\|CDD\|181224	PRK08084, PRK08084, DnaA inactivator Hda.	2.64956e-173
NZ_CP024956.1\|WP_011092857.1\|1455393_1456839_-\|metalloprotease-TldD	gnl\|CDD\|182685	PRK10735, tldD, protease TldD; Provisional.	0
NZ_CP024956.1\|WP_011092853.1\|1450539_1451253_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	6.06598e-143
NZ_CP024956.1\|WP_010307474.1\|1442015_1442642_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	7.43582e-133
NZ_CP024956.1\|WP_011092851.1\|1448463_1449342_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.34589e-180
NZ_CP024956.1\|WP_048018364.1\|1447539_1448088_-\|glycine-cleavage-system-transcriptional-repressor	gnl\|CDD\|236935	PRK11589, gcvR, glycine cleavage system transcriptional repressor; Provisional.	1.96117e-131
NZ_CP024956.1\|WP_039290703.1\|1439989_1440625_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	9.55596e-127
NZ_CP024956.1\|WP_011092852.1\|1449358_1450396_+\|outer-membrane-protein-assembly-factor-BamC	gnl\|CDD\|236955	PRK11679, PRK11679, outer membrane protein assembly factor BamC.	0

>NZ_CP024956.1|WP_048018364.1|1447539_1448088_-|glycine-cleavage-system-transcriptional-repressor
MPSSQEHYLVITAMGVDRPGIVNAITRHVSSCGCNIEDSRLAMLGKEFTFIMLLSGSWNAITLIESTLPLKGAEMDLLIVMKRTESQASQPTPSTVWVKVDVADSPHIIERFTDLFDSHQLNIAELVSKTQPAEGGKPPQLYIQIAAHSSATLDSSIIEPAFHQLCTELHAQGSISVVNYAR
>NZ_CP024956.1|WP_011092849.1|1447019_1447487_-|thioredoxin-dependent-thiol-peroxidase
MNTLKAGDIAPKFSLPDQDGEQVNLTDFQGQKVLVYFYPKAMTPGCTVQACGLRDNMDDLKKHGVEVLGISTDKSEKLSRFIEKEVLNFTLLSDEDHQVSEGFGVWGEKTFMGKTYDGIHRISFLIDENGKVEKVFDDFKTSNHHDIVLDYLKSA
>NZ_CP024956.1|WP_039290709.1|1445386_1446850_-|M48-family-metallopeptidase
MSIRLRKTVMSVLLGTLLAGNLLPAQADTQDRLPDIGTTAGGTLSINQELAMGDFYVRQLRAGAPLINDPLLSNYINQLGNRLVKQADSVRTPFHFYLIRNDDINAFAFFGGNVVLHSALFRYADSESELASVLAHEISHVTQRHLARSMESQQRSAPLTWVGALGSILLAMANPQLGMAALSGTLAGAQQGMITFTQSNEQEADRIGIQVLQRAGFDPQAMPNFLQKLADQSRYASRPPEMLLTHPLPESRLSDARNRANQMRPTPVQSSQDFLFAKIRTFGMYGSPDRPLNDDLLVQWEKGNVREQLAAKYGRAIQLYQAKKYDEARNVLQPLLSSAPDNPWFLDMMTDIDLGQNRAAQAIARLQNVPGMQANPVLQLNLANAYVEGKQPAAAGKILYRYTYAHPDDPNGWDLLAQTAAAQGQRAEELAARAESLALNGQLDQSIRLLSNASSLVKLGSLEQARYDARIDQLRQLQQRFRQYQKS
>NZ_CP024956.1|WP_039296216.1|1445000_1445372_-|arsenate-reductase-(glutaredoxin)
MTQPSTKASVTIYHNPRCSKSRETLALLQEHNITPDVVLYLDTPPDAATLDQLIQQLGFSSARELMRTKEEIYQQLGLSNAALTEAQLIQAMVDNPKLIERPIVVAQGQARIGRPPEQVLEIL
>NZ_CP024956.1|WP_039296286.1|1444247_1444955_+|DnaA-inactivator-Hda
MILNTPAQLSLPLYLPDDETFASFYPGENASLLAAVNNALYQEHGSYIYFWSREGGGRSHLLHAACAELSRQERAVGYVPLDKRAYFVPDVLEGMEQLALVCIDNIESIAGDEAWEMAVFNLYNRIQETGRARLLITGDRPPRQLNLRLPDLASRLDWGQIYKLQPLSDDEKGEALQLRARLRGFELPEDVSRFLLKRLDREMRTLFMTLDQLDHASITAQRKLTIPFVKEILGL
>NZ_CP024956.1|WP_039296218.1|1442858_1444148_+|uracil-permease
MTRRAIGVSERPPLLQTIPLSFQHLFAMFGATVLVPILFKINPATVLLFNGVGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVALIVKKAGTGWLNVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPADGASVDSTAVTISLATLAITILGSVLFRGFLAIIPILIGVLAGYVLSFAFGVVDLTPIREAHWFAMPTFYTPRFEWFAILAILPAALVVIAEHVGHLVVTANIVKKDLMRDPGLHRSLFANGISTVLSGFFGSTPNTTYGENIGVLAITKVYSTWVIGGAAILAILLSCVGKLAAAIQAVPVPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVHLGSTELKGMALATVVGIGMSLVFKVISLFRKEEEILDAPEENDARS
>NZ_CP024956.1|WP_010307474.1|1442015_1442642_+|uracil-phosphoribosyltransferase
MKIVEVKHPLVKHKLGLMRENDISTKRFRELASEVGSLLTYEATADLATEKVTIDGWCGPVEVDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGIYRDEETLEPVPYFQKLVSNIEERMALVVDPMLATGGSMIATIDLLKKAGCHSIKVLVLVAAPEGIAALEKAHPDVELYTASIDKGLNEQGYIMPGLGDAGDKIFGTK
>NZ_CP024956.1|WP_039290704.1|1440624_1441662_-|phosphoribosylformylglycinamidine-cyclo-ligase
MTDKTSLSYKDAGVDIDAGNALVDRIKGVVKQTRRPEVMGGLGGFGALCALPQKYREPILVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTAASVITGIAEGCKQSGCALVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVQHGDVLVALAASGPHSNGYSLVRKVLEVSKTDPEQFELEGKSLADHLLAPTKIYVKSVLSLIEKVDVHAISHLTGGGFWENIPRVLPEGMQATIDESSWQWPAVFNWLQQAGNVSRHEMYRTFNCGVGMIIVLPAEQADEAVALLNSSGENAWKIGVITQTDAGDAVVIN
>NZ_CP024956.1|WP_039290703.1|1439989_1440625_-|phosphoribosylglycinamide-formyltransferase
MKNIVVLVSGHGSNLQALIDACKNGRLKGKIVAVFSNNAEAYGLVRAQDAAIPTCVLNPEDFADRAAFDAALANEIEQYEPALVVLAGYMRILSPEFVAQFAGKMLNIHPSLLPKYPGLHTHRKALENGDREHGTSVHFVTDELDGGPSVLQAKVPVFSDDTEESLSERVKTHEHTIYPMVINWFLNGRLVMRDNEAWLDSVRIPPQGYAA
>NZ_CP024956.1|WP_039290702.1|1438750_1439773_+|HoxN/HupN/NixA-family-nickel/cobalt-transporter
MLLPVLRNHPRSAMLLILLLSANLVSWCWALVVFQNNGALIAACLLAWSYGLRHAVDADHIAAIDIVTRKMMQQGQRPLGVGAWFSLGHSTIVILATVAIAATAAAFQKDIAWFHDVGGIIGTSVSAFFLLAMALVNLVILRGVWRNFRALKRGEPLQNRDEMGASGGMMSWLFRSTFRMVDKSWHMYLVGFLFGLGFDTATEIGVLGISAASASLGVSIWSILIFPALFASGMALVDTLDNILMVGAYGWAFNKPQRKLYYNMTITGASVVVALFIGGIEALGLLVDKFDLQGGAWSVVSGLNDSLGNAGFIVIGIFVVFWCISMLIYRWKDYDSLVVS
>NZ_CP024956.1|WP_011092851.1|1448463_1449342_+|4-hydroxy-tetrahydrodipicolinate-synthase
MFTGSIVALVTPMDAKGAVDRASLKKLIDYHVASGTSAIVSVGTTGESATLSHDEHGDVVLLTLELSDGRIPVIAGTGANATAEGVSLTKRFHGTGVVGCLTVTPYYNKPTQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDMLPETVARLSEVKNIVAIKEATGNLSRVSQIQELVSEDFILLSGDDASGLDFMQLGGKGVISVTANIAAREMAELCRLAAQGNFVEARRLNQRLMPLHQKLFVEPNPIPVKWACKELGLMATDTLRLPMTPLTDSGRTVMGQALKQAGLL
>NZ_CP024956.1|WP_011092852.1|1449358_1450396_+|outer-membrane-protein-assembly-factor-BamC
MSYSLQKSMVAKVVGLSLVMLLAACSSDQRYKRQVSGDESYLKAPAQHVLNTPAGMILPVQNGDFDIPPVTLNGAVGKELDIRPPVQPLALLNGSRTQTSGDTATLLLENSAQNSQIWSQVIRVLQDNAFTIANRQDASQTLTTDWISWPREDENVPYQGRYQISVQQQGYQVALIVKLLGLQLNGQPVTTSDQTQRYAGLMLNVLSNGLDSQATARENALANRTIGSLDVQSGADDTGLPLLIVRGPYTVVWDRLPVALDKIGMKVNDRSRPQGSVSVTYRAPSGGTWDDLGAKNPELPNGDYKLQVGDLDNRSSLQFIDSKGHTLTQSQNDALVAVFQAAFSK
>NZ_CP024956.1|WP_011092853.1|1450539_1451253_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MQKLAELYRGKAKTVYTTEDPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMSKLEEAGIPTQMVSLLSDNEVLVKKLEMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCKTFGWVSEENLARMKELSYKANDVLSKLFGDAGLILVDFKLEFGLFNGEVVLGDEFSPDGSRLWDKETLNKMDKDRFRQSLGGLIEAYEEVAHRIGVKLD
>NZ_CP024956.1|WP_011092854.1|1451453_1451906_+|DUF441-domain-containing-protein
MAYIDPTLLILLVLAGLGIISHNMTVTLAILVLLAIRITPLNSYFPWVEKYGLSIGIVVLTIGVMAPIASGKITASEVMHSFLHWKSLLAILIGVAVSWLGGRGVSLMSNQPSVVAGLLVGTVMGVALFRGVPVGPLIAAGLLSLLIGKT
>NZ_CP024956.1|WP_039296214.1|1451923_1454029_+|tRNA(Met)-cytidine-acetyltransferase
MILRDFLHSQQQQQRYGIRRLLVLSGESSWCEEQAMVLSSQSAGDWLWVSEHAPDSVASLPASRVRTLLGREFHHAVFDARSGVDVEALAMLSGTLRAGSWLIMLVPSWQVWSTLPDEDSLRWSEHAQPIATPHFIQHFQRQLLADDDVVLWQQGQPLVIQPLAVRSDWQPAQGEPTARQQQILHELSAAESGVFVITAPRGRGKSTLAGMLTQRSRGTCWITAPSRSATDILQQYARSDAPFWAPDALLAYCRLHGAPDVDWLLIDEVAAIPSSVLTALLPYFPRILMTTTVQGYEGTGRGFLLKFCAALPQCRVFSLDDPLRWAANDPLERVLDQALLFNEPASLHFPLNPTDGALTLPSAKLDIRTECADDWLTHPERLTWCYALLCSAHYRTSPLDLRRLMDAPGMHIASAQVAGDIRGVLWLVEEGGLSDSLAHDVWAGRRRPRGNLVAQSLAAHAGLWNAPTLRARRVSRIAVASSSRRQGIGRALIADQTREAQKQALDYLSVSFGYQPDLWAFWQSCGFQLVRIGSHLEASSGCYSAMAILPLSEAGYELAQQGSQQLARDWYWLQRMIPLNLALPQTENIERDTESIALNDDDWRELAGFAFAHRPMEASFAAICRLLIHTSLPLPALRLLAETPSEGEQTAATLGLTGKKALLKRWREETTSALIELDAQRGERWRLWVLPDDAAEDALHP
>NZ_CP024956.1|WP_011092856.1|1454061_1455327_-|thioredoxin
MSDAIITASDTSLDALLNNSDKPILLDLWAPWCQPCKTLAPLLNTIADNTPDNLTVAKLDVEQYPAFMQRFGVRGIPTLLLFKNGQEISRQIGVKTLAQLRGWLESHEIAIQNTAQPLADTHVTWSTFYGDASLHTFLHQRLRQHAADGNIEHAFSPYWQDNKGSVSAVLAHSADIRIFERVTGLPAALGLLLEKLPSTTPEQVDALFAALAPGKTVDGVALQWLHHWLSHEENQWSDWLVDETVDGLRQQWVQAISRLLAGESVAESEWTALHQQAISWEEKAATELGLEKNIATILASLSPPPAASDADSWRSISTTLGFALAQILQIKDGWSREERATPDKRFRWFQAQEEATPSKKLTDEQITALREQWLQENSDFSAKEDAFYQRYPQLSEAQKIPLQETLWELLRRAPAFKSQLD
>NZ_CP024956.1|WP_011092857.1|1455393_1456839_-|metalloprotease-TldD
MAIHASRAPVSPALSAFSLETTEITHALNHIMQRQVDYADLYFQRRQQEGWQLENGIVRPTGFSRDQGVGVRAVSGEKTAFSYTNDLRPQAILQAANTVREISRRGQSASVALPASLPHGTTALYPSDNPLLAVTEEHKRQLLLSIDRQARARDPRVSQVTAYLNASHETILIARHDGRLATDVRPLVNLVINVVVEQQGRRENGSSGGGRRLDYRFFADETVSQWVNQAVDQALNNLDASSVPAGTYSVILGAGSPGILLHEAIGHGLEGDFNRKGSSAFSSLLGERVAAPGITVVDDGTLANRRGSLHVDDEGTPSQCTTLIEDGILRGYLQDSLNARLMNTALTGNARRASYSALPLPRMTNTYMLAGQYPAEEVIASVKNGLYAVGFGGGQVDISSGKYVFSTTEAYLIENGRVTRPVKGATLIGHGPEALLHVAMVGNDLALDDGNIACTKEGQSLPVSVGQPTLRIDNMTVGGSQ
>NZ_CP024956.1|WP_011092858.1|1456873_1458238_-|suppressor-of-the-inhibitory-activity-of-the-carbon-storage-regulator-CsrA
MPSLDESPVLATPQTDTLQSLAGDVLDFAAAKGASQAVVSISQGNRRTIRVRNGDIDTLTQNQSHFLSVTVYFGQRAGTVSSTLFSKEALQDAVDAASTLAKYADEDPCSGLPEAQHFARDIYDLALHNADTLTVEQALSLALRAEQAANTTHEHGYSESSEITSQQGDFILANSAGFSAGYPTSLHTLWSHAIAHNDTQRQQGFWHTTGRAPSLLASPEAIGHTAAQRAVAQLGARKLSTRRCPVLFDAPVAHSLIHHLVGALSGAALYRSTSFLGQCLGETITAPHLSLYENPFIPGALASACFDAEGVATAPRHVIHDGIAQGYFLSSYSARRLGLTTTGHAGGAYNLSVSSSQSHAGDDLPALLRQMHTGLLVTTLLGHGLNPMTGDYSQGVAGFWVENGEIQYPVEEITIAGNLKTLLLHCVALGADIHTQGNLSCGSLLIEEMQIAGQ
>NZ_CP024956.1|WP_010283952.1|1458402_1458825_-|biopolymer-transporter-ExbD
MSMSSPFESQEDALLNDINMTPFIDVMLVLLIVFMITLPVINHAVKVELPRASVEKIKKDPQAVDIAITATGQINWNKEAVDDAQLIAKLDAASAEGTHPNIRLFADQAVEYGRVAYVMTNAQQRGLSKIDFVLQPVKAP
>NZ_CP024956.1|WP_011092859.1|1458839_1459616_-|MotA/TolQ/ExbB-proton-channel-family-protein
MNTLDIHHFWQQGDVVTHSVAIILLIMSLLSWTVMLLKARQLFALNKSVQYSRNTFWQATSLQESVEKFGKQRFNPFRDLVIEGHALLKHPHKFSSTLGGHVDLSDWLVRGLSNTLDTNSGKLQSGLGTLASIGSTAPFIGLLGTVWGIFHALQTISTIGQPDLAQVAGPVGEALIMTAFGLFVAIPAVLGFNAINRRNRIVLHAMNRFAHDLHAYLLTGARVDTSITDLTNITDQTSITDQNSAARYEPTHPVERSA

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Crispr_ID: NZ_CP024956_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_6

3942246-3942341

Orphan

Consensus_repeat	Method
GCGCAGCAACGGCCCGAAGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024956_6

>merge|NZ_CP024956|6|3942246-3942341|CRISPRCasFinder
GCGCAGCAACGGCCCGAAGGGTGACAGACAGGGTTTCCGCCATAAAAAAACGTCAGGAACATTTTTCAACGTTGCGCAGCAACGGCCCGAAGGGTG

>NZ_CP024956|6|6|3942246-3942341|CRISPRCasFinder
GCGCAGCAACGGCCCGAAGGGTG	ACAGACAGGGTTTCCGCCATAAAAAAACGTCAGGAACATTTTTCAACGTT
GCGCAGCAACGGCCCGAAGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_039293414.1\|3945724_3946537_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP024956.1\|WP_039293390.1\|3932401_3933541_-\|glycosyl-hydrolase-family-88	unknown	unknown	gnl\|CDD\|226678
NZ_CP024956.1\|WP_080725798.1\|3930304_3931294_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293806
NZ_CP024956.1\|WP_100675260.1\|3943860_3945498_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP024956.1\|WP_011095074.1\|3950617_3953419_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP024956.1\|WP_039296628.1\|3931302_3932049_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|182051
NZ_CP024956.1\|WP_039293393.1\|3935445_3936336_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP024956.1\|WP_039293391.1\|3933584_3935144_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340890
NZ_CP024956.1\|WP_039293404.1\|3938738_3939815_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_CP024956.1\|WP_011095077.1\|3955806_3956577_-\|2-dehydro-3-deoxyglucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
NZ_CP024956.1\|WP_039295227.1\|3937970_3938648_+\|type-1-glutamine-amidotransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|153235
NZ_CP024956.1\|WP_011095076.1\|3954831_3955716_-\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
NZ_CP024956.1\|WP_039293405.1\|3939820_3942013_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP024956.1\|WP_155242711.1\|3946618_3946786_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_039293388.1\|3929273_3930206_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176153
NZ_CP024956.1\|WP_039293401.1\|3936504_3937923_+\|coniferyl-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143451
NZ_CP024956.1\|WP_011095075.1\|3953509_3954655_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP024956.1\|WP_011095072.1\|3946861_3949099_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP024956.1\|WP_039293416.1\|3949149_3950502_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP024956.1\|WP_039293407.1\|3942466_3943762_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_039293414.1\|3945724_3946537_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.74682e-161
NZ_CP024956.1\|WP_039293390.1\|3932401_3933541_-\|glycosyl-hydrolase-family-88	gnl\|CDD\|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	3.16951e-128
NZ_CP024956.1\|WP_080725798.1\|3930304_3931294_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293806	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain. Pseudomonas pseudoalcaligenes OPHC2 is a thermostable organophosphorus hydrolase which a broad substrate activity spectrum: it hydrolyzes various phosphotriesters, esters, and a lactone. This subgroup also includes Pseudomonas oleovorans PoOPH which exhibits high lactonase and esterase activities, and latent PTE activity. However, double mutations His250Ile/Ile263Trp switch PoOPH into an efficient and thermostable PTE. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	5.1892e-117
NZ_CP024956.1\|WP_100675260.1\|3943860_3945498_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP024956.1\|WP_011095074.1\|3950617_3953419_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP024956.1\|WP_039296628.1\|3931302_3932049_+\|SDR-family-oxidoreductase	gnl\|CDD\|182051	PRK09730, PRK09730, SDR family oxidoreductase.	1.53666e-128
NZ_CP024956.1\|WP_039293393.1\|3935445_3936336_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.6953e-34
NZ_CP024956.1\|WP_039293391.1\|3933584_3935144_-\|MFS-transporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.14234e-99
NZ_CP024956.1\|WP_039293404.1\|3938738_3939815_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.18012e-89
NZ_CP024956.1\|WP_011095077.1\|3955806_3956577_-\|2-dehydro-3-deoxyglucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
NZ_CP024956.1\|WP_039295227.1\|3937970_3938648_+\|type-1-glutamine-amidotransferase-domain-containing-protein	gnl\|CDD\|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	5.24491e-102
NZ_CP024956.1\|WP_011095076.1\|3954831_3955716_-\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0
NZ_CP024956.1\|WP_039293405.1\|3939820_3942013_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	8.84758e-67
NZ_CP024956.1\|WP_039293388.1\|3929273_3930206_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176153	cd08464, PBP2_DntR_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold. This CD includes an uncharacterized LysR-type transcriptional regulator similar to DntR, NahR, and LinR, which are involved in the degradation of aromatic compounds. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.05995e-83
NZ_CP024956.1\|WP_039293401.1\|3936504_3937923_+\|coniferyl-aldehyde-dehydrogenase	gnl\|CDD\|143451	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.	0
NZ_CP024956.1\|WP_011095075.1\|3953509_3954655_-\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP024956.1\|WP_011095072.1\|3946861_3949099_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP024956.1\|WP_039293416.1\|3949149_3950502_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP024956.1\|WP_039293407.1\|3942466_3943762_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0

>NZ_CP024956.1|WP_039293405.1|3939820_3942013_-|TonB-dependent-siderophore-receptor
MKARKNNRKKAQWLLPVLMVVVPPVLSAEPATINNSEKAKAADVMVVKADRSEVNVNLAGAGMTTDEVEIGPLGKRARLDTPYSTTTVTEAMIANQQAKNVNDLLKYSASSQMQARGGIDVGRPQSRGMQGDVLANSRLDGLNIISTTAFPVEMLERLDVINSLTGALYGPASPAGQFNFTQKRPTAQTLNRFTVGYSGKGAAVGYADLGGHAGDENQFGYRINLLHDEGEGSISNSTLRRQLASVAFDWNLSPDTVLEVNASEYRFRKMGYAGGFSYGPTIQLPSAPDVTKQGYGQSFAGLDLVTKTTSTRLKHYFNNNWYASGGVGYQTADRGMRSLSNAITNNQGTVSTSLTQPYSAGRFKVLSNTLQLNGHIDTNGPSHDVVFSTTGYQWTIYNGLGNSRRFPLGNSTIDSPRHYTDPSDGRFYLGSGRYKSSRTSQQAITAGDTITFNDRWSAMGVVSQSWITSRSFGSDGGVTRDTGTSPTVSLMYKPLSNVMTYVAYADSLEQGGTAPTDDYVVNKGQTLKPYRSTQYEAGVKSQWDGLNLNAAIFRLERPFAYVAADNVFKEQGNQVNTGLELMADGEVLSGLHLYGSMTLLDPKLKDTALAATRDKRVVGVPKFQANLLTEYSHPSAPNLVYIANLHYTGKRAANDTNTSWADSYVTLDLGTRYGFKLYDKPAAFRVALNNVTNERYWASIFPGSTDGINGGANAFVGDPREIRASLTVDW
>NZ_CP024956.1|WP_039293404.1|3938738_3939815_-|ABC-transporter-substrate-binding-protein
MLKRYFAARYGELLLNALMLLAVSFSGVHLVQAETPESAPRTIHYYGDRAVTVPATVERIATSWNAQNSILAMLGYGDRIVGTTKLVRDMPLFRQFMPSITQASLVSQSGNMGINTEALIARRAQVFFVSDSVPVAEAEALNKAGIAIVPLRYNSLAAMVERTLITGEILGPEASRRAQDFAAYYQDNVRRVTEVIQNIPSQQRVKVYHAVGDPLTTSGRPSLNQDWMDLGGAINVAEPWFSRSGVTTAPVSLEQIFQADPDVIITMRAADARAIRQDAQWQQLRAVKQGRVYANPLGMFWWCRETSEQALQFLWLAKTLYPQQMQHIDMAKETHDFYQRFYGFDLTAQQVDSILSPP
>NZ_CP024956.1|WP_039295227.1|3937970_3938648_+|type-1-glutamine-amidotransferase-domain-containing-protein
MKILMVLTSHDKLGNTGNKTGFWLEEFAAPYYTFKDAGAEIVLASPAGGKPPLDPKSDLADFQTELTHRFKADPAAQQELANTVKLDTVIEQDFDAVFYPGGHGPLWDLAESPVSIALIEAFVRANKPTGFVCHAPGVLIHVKTEDGDALIKGRKVTGFTNGEEEAVQLTDVVPFLIEDEFKKLGGLYEKGPDWAPYLVEDGKLITGQNPASSEVVAKAILKQLA
>NZ_CP024956.1|WP_039293401.1|3936504_3937923_+|coniferyl-aldehyde-dehydrogenase
MSTQQSKKDLQAILKTMKRAHIASGPADAALRKDRLQRSINLLRENHAALAQAMSDDFGHRSLYHSFAADIGITLKMLQNAIDNVERWMQPEPVDEPAPGMQAWIQHQPLGVIGVISPWNFPVNLSFGPLADIFAAGNTAILKPSELTPHTSELLAELIAHYFDPLELAVVLGDAEIGQAFSELPFDHLVFTGSTAVGKHVMRAAAANLVPVTLELGGKSPVVIDSSADITEAAERTLTVKTFNAGQICLSPDYVLLPEGQEQAFRDAAKAFMQKSFPTLQANPDYTSIIADRHYDRLIRLLKEAEQQGATVVSLAPEGEASYDAKSRKIAPHLVFGVRDDMTIMQEEIFGPLLPVKTYQTAEEPINYINAHPRPLAAYLFSHDEAMQQRFAGRTTSGALVINDVMTHVSIDTLPFGGVGASGIGAYHGVHGFRRFSHAKPIVIQSEDGASNLTLRAPYHEKQNAIVAVLKG
>NZ_CP024956.1|WP_039293393.1|3935445_3936336_-|LysR-family-transcriptional-regulator
MSLLRLRTFVEVYRQRSISGAARALNLTQPAVSQHIAGLEVAVGRRLFERQANGVTPTSAADDLAADLGDKLDEAEAALASARARSMDVAGTLHIIGHADFMAEVVSEQLFPLLEAGVRVHMHTGDGDLIKQMLLEGHCDLGITAHPVTDKRLKSDLLKSATLQAVAAPAIVERLVQADDLPQALAREPMLAYDLELPLIDHWLKKNRIQDKGLVPAVVSQDLRALRRVLTSGFGWTVMPIYLCQDLLDSGELVIIPPPVGTTQLDYYLVWVPGALRQPRLAHARQTFLWRLQHAE
>NZ_CP024956.1|WP_039293391.1|3933584_3935144_-|MFS-transporter
MKTRKIGLANYLAYGSGDFLGAGTTALTAAWLLYFYTTFCGLTPIEATFIFAMARVLDAVVSPLMGFLTDNFGSTWLGKRFGRRKFFILLGIPFVFSYSFMWVGDMSYWYYLLTYLLFDIVYTMVLVPYETLVPEMTDDFKQKTKFSGARIALAQLSAILAAFLPGILLGYFGKDNAVSFFYSSLVFSIICALVLTLVYFFTWERPRDQMSEASLRAEKERQSLTLSQSLKRLNVELVSTLRIRIFRQHLGMYLGGYIAQDVFNAVFTYYVVFVLMQSPTMASNLMGTMAILQFIAVIGMIPLCIRFGPAPSYRFVVCLFGLSALSYAVLWYSGLHDTFSLLLLISALAGIGRGGINYVPWNTYTYIADVDEVITAQRREGIFAGIMTLTRKASQAGAVMLVGIVLQLSGFVSGQSVQAPSVSHTILMILSFGTVCVLALGFLVSLRFKLNLQTHSVLREETLKMREAGRPVPEKITPQARATVEMLAGMPYESLWGNNNIGYLNRHNGDKPVTHATQP
>NZ_CP024956.1|WP_039293390.1|3932401_3933541_-|glycosyl-hydrolase-family-88
MTVFSVKHSPLLRQPERFISREDLKALICRITDNLVNIEDKTGEFLLRLDDGRVIDTKGWAGWEWTHGIGLYGIYQYYQQTGDEQMRAIIDDWFTERLAEGTPTKNVNTVCPFLTLAYRYEETGDARWLPYLERWAEWVMYEMPRTDKQGLQHIVYNNENHQQLWDDTLMMSVLPLAKIGKLLNRPEFVEEATYQFMLHVQYLMDRESGLWFHGWTFEGQHNYAKARWARGNSWLTIVIPEFIELLDLPEHNATRRFLLQVLESQIEALAKYQDDSGLWHTLIDDPNSYLESSATAGFAYGILKAVRKRYVDPSYAEVAEKAIRGVINHVNKDGELTQVSFGTAMGTDLDFYRNIALTSMPYGQAMAILCLAEYLRVYL
>NZ_CP024956.1|WP_039296628.1|3931302_3932049_+|SDR-family-oxidoreductase
MEFITLITGGSRGIGRATARYLAGKGHKICIGYRTQQDSANSVLEEIRASGGTAIAVQVDIADEEQVIELFKQTDKMLGRLTGLVNNAAILKPQATIEQLDATRLNDIFATNTVGSFLCAREAVKRMAFRHGGKGGAIVNVSSAAARLGSPHEYIDYAASKGALDTLTIGLSLEVADQGIRVNAVRPGFIYTDMHADGGEPARVDRVKHSLPMKRGGHPMEVAQAIGWLLSDEASYVTGNFIDLAGGK
>NZ_CP024956.1|WP_080725798.1|3930304_3931294_+|MBL-fold-metallo-hydrolase
MKMNLLKQTLLPVVLLAGTPLIAEAESVPQLRTQAPGYYRMMLGQFEITALSDGTVTIPLDKLLTHIPHEDILHLLAQKNLQPQVETSINAYLINTGKRLILVDTGAGPLFGKQGGKLPDNLRAAGYPPEKIDTVLLTHIHADHSGGVSRDGKLVFPNATVYVNQKDVDFWLNPSNSNHVRDSEKHTFGQSEDSLQPVVAAKRLKTFSGKQPLFPGITAVPAPGHTPGHSLYQIESDGQKLTLWGDTIHAEAVQFPRPMTTIDFDRNMDEAADARLQVLAEAAQNNEWIGAAHISFPGLGQGKAVYDSSGKPNGYRWIPANYSMAGLKN
>NZ_CP024956.1|WP_039293388.1|3929273_3930206_-|LysR-family-transcriptional-regulator
MENDFRGVDLNLLVTFLVLYREKSVSAAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQVMRPTARADYLATQLSPTFEQLQSVLGDPERFDPRTDSRVITLGMTDWVEIWLMPLLLKRLNATAPNLRINLVATDPFLDVDRLENDSVDLVISVASSQANWLKQRALLSSGFRVLWHPQQLTLPYPLPLALYSQQRHLLVTYRERARGVVDDMLEKQEMTRTIHYTTPHFSALLGILQQTPSVATVPEKLATLWCQHYGLVDSPVPLDLPRYTLSALWHARQDSNPAIKWLYEQIAEVVEEQEANSPPA
>NZ_CP024956.1|WP_039293407.1|3942466_3943762_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQAVLGKDAKDQANIDKIMIDLDGTENKSQFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRMGSEVFHTLAKVLKSKGMGTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKSFTSEEFTHFLEDLTKQYPIVSIEDGLDESDWAGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIDKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDSAPFNGLKEVKGQ
>NZ_CP024956.1|WP_100675260.1|3943860_3945498_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATIQVIPHITNAIKERIIEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVQVGREHTLFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRTVPANERAKIALFCNVPEKAVISLKDIDSIYKIPALLKSQGLDDYICKRFSLNCPEANLSEWEQVVYEEANPGGEVTIGMVGKYVALPDAYKSVIEALKHGGLKNRLTVNIKLIDSQDVETRGVEVLKDLDAILISGGFGYRGVEGKIMSANYARENNIPYLGICLGMQVALMEFARNVAGMEGANSTEFVPDCKYPVVALITEWRDENGDVEVRDEASDLGGTMRVGGQQCHLTEGSLVRQMYGEQTIIERHRHRYEVNNMLLKQIEAAGLRVAGLSADRKLVEIVELPDHPWFVACQFHPEFTSTPRDGHPLFAGFVKAAGAYQKRQVK
>NZ_CP024956.1|WP_039293414.1|3945724_3946537_-|nucleoside-triphosphate-pyrophosphohydrolase
MTVSLTNLSSVERLLAIMKTLRDPENGCPWDKKQTFDTIAPYTLEETYEVLDAISRQDFDDLRGELGDLLFQVVFYAQMAQEKGLFDFSDVCNAISDKLERRHPHIFGELTLTDSDAVLANWEQTKAQERAEKDRHSPLDDIPDALPALMKAQKIQQRCSSVGFDWDSLGPVLDKVYEEIDEVMFEARQAVVDEEKLGEEIGDLLFATVNLSRHLGHKAESALQAANRKFTRRFREVEQIVTASGKTLEQATLDEMEAAWQQVKKQEISH
>NZ_CP024956.1|WP_155242711.1|3946618_3946786_-|hypothetical-protein
MPRKSLPRRERVSDGPPEDCISEGTAKRRNSRAKDWGHGAASIGRPVSGATQLRK
>NZ_CP024956.1|WP_011095072.1|3946861_3949099_-|GTP-diphosphokinase
MVAVRSAHLNTEGEFVPDAWIASLGIASQQSCERLAETWRYCEQQTQNQPDASLLLWRGIEMVEILSTLSMDNDSMRAALLFPLADANVVDEATLEAAFGKNIVDLVHGVRDMDAIRQLKATQNDSDASEQVDNIRRMLLAMVEDFRCVVIKLAERIAHLREVKDAPEEERVLAAKECTNIYAPLANRLGIGQLKWELEDFCFRYLHPDEYKKIAKLLHERRIDRAQYIDDFVKTLRDAMKEEGVQAEIYGRPKHIYSIWRKMQKKALSFDELFDVRAVRIVVERLQDCYGALGIVHTHYRHMPDEFDDYVANPKPNGYQSIHTVVLGPSGKTLEIQIRTRQMHEDAELGVAAHWKYKEGTAVGGRSGYEGRIAWLRKLLAWQEEVSDSNDVLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDIGHRCIGAKIGGRIVPFTYQLHMGDQIEIITQKQPNPSRDWLNPNLGYITTSRGRSKIQNWFRKQDRDKNILAGRQILDDELAHLGVSLKAAEKLLLPRYNVNSLDELLAAIGGGDVRLNQMVNFLQSQLKQPSAEELDREALRQLTQKTHQPPARSNNKDNGRVVVEGVGNLMHHIARCCQPIPGDEITGFITRGRGISIHRADCEQLDELRASSPERIVDAVWGESYSSGYSLVVRVIANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRQQGA
>NZ_CP024956.1|WP_039293416.1|3949149_3950502_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSPNRRVTTRKAVPAKNLTVTVASLDPFGQGVARHEGKTVFVTGVLPGEQAEVQLTEEKRQFSHAKLKRLLTPSPQRVEPPCPHFTRCGGCQQQHADITLQQSSKTAALMRMMTRETGIELSAASLIAGTPYAYRRRARLALYFQAKEQRLLMGYRQSNSHDLVDIKACPVLRPELEALLQPLRDCLSQLSAVKRLGHVELVQAENGPLLVLRHLDPLHPADEQALRDFAQRQGVSVYLAPDAESLTCLHGEEPVYHVAGLTLAFSPRDFIQVNDAVNQQMVAQALAWLDVQPQDRILDLFCGMGNFTLPLAQRAASVVGVEGVTALVEKGRENARRNALSNVTFFHQNLEDDVTQQPWAAQGFDKILLDPARAGAAGVMEQITRLAPKRVVYVSCNATTLARDSKVLLAAGYRLANVAMLDMFPHTGHLESMALFLHDTGTRKAQ
>NZ_CP024956.1|WP_011095074.1|3950617_3953419_+|two-component-sensor-histidine-kinase-BarA
MTKYSLRARMLILILAPTLMIGLLLSSFFVIHRYNQLQAQLADSGTSIIEPLATISAYAITHRQMDTIPALINTLHRRHSAIIRTISVFDARNQLLATTNVRNSVTLQPISSDALSYNRLHLHHTNDALILHMPIVNDSEFMPGGATPVLPGTATPLGYLVIELDTSTIRLQQYQEIFIAALLLLLSLGAAVLFAYRLMRDVTTPIRNMVDTVDRIRRGQLDSRVEGYMLGELDMLKNGINSMAMSLTAYHEEMQQNIDQATYDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRQTLKTPLNTTQTDYLLTIERSANNLLNIINDVLDFSKLEAGKLVLEDIPFSLHSTLDDVVMLLAHTAHEKGLELTLSIQNDVPEQFVGDPLRIQQIITNLLGNAIKFTEQGNIDIRVEKRRQEHHQVQLEVQIRDTGIGIAELQQSQLFQAFRQADTSISRRHGGTGLGLVITQRLVKEMGGDISFQSQLNKGSTFWFHITLPLNPHAMPTEPAYTMLQGKHLAYVEYHPIAAQATLDILSQTPLMVSYSPTFEQLPEGDFDILLLGIPVQYRNMLLDYTPRLRDICRRAPCVILALPSLAQMDAEQLKTFGVHACLSKPLAASRLLPLLQDSTLFQLSFLPDATTSHQSVVRHPARLPLSVMAVDDNPANLKLIGTLLEEQVDTIILCESGTDAISQAKMHQIDIILMDIQMPGMDGICASELIRQIPHHATTPIIAVTAQTMTGEREHLLRSGMDDYLAKPIDEQMLKSVLTRHARKDPLKRDRGNIAGLLNEHDDSQLSLDWALAQQQAANKPELARDLLQMLLDFLPEVRQKIENVLNGQTDDNIIELVHKLHGSCSYSGVPRLKRICRYLEQQLRNGVHASDLEPEWLELLDEIDNVNKAAQPHIKPLHSSL
>NZ_CP024956.1|WP_011095075.1|3953509_3954655_-|glycerate-kinase
MKIVIAPDSYKESLSAQEVATQIEKGFREIFPDACYVKLPVADGGEGTVEAMVAATDGKIVNVKVTGPLGDNIDAFFGLSGDEKTAFIEMAAASGLERVPSQLRNPLKTTSYGTGELIRCALDHGVQHCIIGIGGSATNDGGSGMVQALGAKLLDKQGEQIGFGGGELDKLASIDISELDERIKSCRFEVACDVTNPLTGKLGASAIFGPQKGATAEMIEQLDNALKHYAAVIRHDLDMDVEHVPGSGAAGGMGAALQAFCGAELRQGIEIVTEALGLDELVRDATLVITGEGRIDSQTIHGKVPIGVARVAKQYNKPVIGIAGSLTADVAVVHEHGLDAVFSVLYNICSLEEALDNAAENVRMTARNIAATIRLAQSISR
>NZ_CP024956.1|WP_011095076.1|3954831_3955716_-|2-hydroxy-3-oxopropionate-reductase
MKIGFIGLGIMGKPMSKNLLKAGYSLVVMDRNLEAVAEVVAAGATSAETPKQVAEQSDVIITMLPNSPHVKEVVLGENGVIEGARAGSIVVDMSSIAPLASREIAAVLAEKEIAMLDAPVSGGEPKAVDGTLSVMVGGDKAQFERCFEILKSMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALVLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALKADDLGSADHSALACYYEKLAKVEVTR
>NZ_CP024956.1|WP_011095077.1|3955806_3956577_-|2-dehydro-3-deoxyglucarate-aldolase
MKTPLLPNRFRQDLQQGKTLIGCWCALGNPISTEVLGLAGFDWLVLDGEHAPNDIVTFIPQLMALKGSHSAPVVRPPCNEPIIIKRLLDIGFNNFLIPFVETAEEAARAVASTRYPPAGIRGVSVAHRSNSYGTEPDYFAKINDNITVVVQIESQDGLDNLDAIIAVDGVDGVFVGPSDLSAALGYLGQPNHPDVQKAIRHIFDRAAAHNKPCGILAPVEADARRYLEWGASFVAVGSDLGVFRSATQALSDKYKK

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Crispr_ID: NZ_CP024956_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_7

4065842-4068030

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

36 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP024956_7

>merge|NZ_CP024956|7|4065842-4068030|CRISPRCasFinder,CRT,PILER-CR
TGAATAGGCTGCCTGTACGGCAGTGAACGGGTTGCCTCGGCCTGAACAGCGATCTCGCGTGTTTCTAAGCTACCTGTACGGCAGTGAACTTGAAATTAGTGACGTGAGCAGAATCGTAAACTTTCTAAGCTGCCTGTACGGCAGTGAACCGATACTCGGATACGCTCCCAGACCTTATCGATTTCTAAGCTGCCTGTGCGGCAGTGAACAACACGCCGCGCGATTTTGTCCACAATGCGCATTTCTAAGCTGCCTGTGCGGCAGTGAACTGTCGAGCGCTGATTCGTCGGTCACTGGATACTTTCTAAGCTGCCTGTGCGGCAGTGAACTCCATAGTCCTCGGAAGGGACGACGATGTGACTTTCTAAGCTGCCTGTACGGCAGTGAACCATTAATTGACGTCTCTCTATCAATTATCTGTTTTCTAAGCTGCCTGTACGGCAGTGAACCCGAGCCTGTATTACAGGTGGTTATGGCGACATTTCTAAGCTGCCTGTACGGCAGTGAACACGCTTGATATTGCTTATGGCGTGTTAGTTCATTTCTAAGCTGCCTGTACGGCAGTGAACGATCGGCAAAGATAATCAGGCACTCATCACCGTTTCTAAGCTGCCTGTACGGCAGTGAACTGAATGAGCCGGCCAATCTATATCACTACACTTTTCTAAGCTGCCTGTACTGCAGTGAACGGCGCGTCAGTGAAGTGGATGTATCCGTGCCATTTCTAAGCTGCCTGTGTGGCAGTGAACGCGGGGGCTAATGTGTCTGAGGCTGGTAGATCTTTCTAAGCTGCCTGTGCGGCAGTGAACCCAGACCGCAGCAACTACCAGTTAGCTCAACATTTCTAAGCTGCCTGTACGGCAGTGAACGAGCAATTCGCGCATGAGTTCGCGTCTACGCTTTTCTAAGCTGCCTGTACGGCAGTGAACGCGTTAGGCTCGTCGGTGTAGATCAACTTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACTCTTTGTAATCACCTGTACGGCTGGCCCACACTTTCTAAGCTGCCTGTACGGCAGTGAACTTACGGACGCAATCTATGTGCCGTGTAACGATTTTCTAAGCTGCCTGTACGGCAGTGAACCTGTCGCAGTATTTGACCCACGACGTGATGCTTTTCTAAGCTGCCTGTACGGCAGTGAACAGCTTGCGTTGCTCGTCTGTCAAATTGCGGGTTTTCTAAGCTGCCTGTACGGCAGTGAACAGGCGATGGTGTCGTGGTCTGACCCTGCAAACTTTCTAAGCTGCCTGTACGGCAGTGAACAACCGTCGCTCGCTGGCCACTGTACGATTCGCTTTCTAAGCTGCCTGTACGGCAGTGAACACTCTGTTATTCCCCAACTGGCGTATGCCGAGTTTCTAAGCTGCCTGTACGGCAGTGAACAACCGTCGCTCGCTGGCCACTGTACGATTCGCTTTCTAAGCTGCCTGTACGGCAGTGAACACTCTGTTATTCCCCAACTGGCGTATGCCGAGTTTCTAAGCTGCCTGTACGGCAGTGAACAACCGTCGCTCGCTGGCCACTGTACGATTCGCTTTCTAAGCTGCCTGTACGGCAGTGAACACTCTGTTATTCCCCAACTGGCGTATGCCGAGTTTCTAAGCTGCCTGTACGGCAGTGAACCCTGACGGCAACGCCGACGCCGATCCGACACATTTCTAAGCTGCCTGTACGGCAGTGAACGCATCCGTCCAGACCGTATCGATAGTCTCTGCTTTCTAAGCTGCCTGTACGGCAGTGAACCCCTGACTGGCTGGCAATCTCCTGTGTCGCCATTTCTAAGCTGCCTGTACGGCAGTGAACCATCGCATTTGGATGCGTGCGATGATATGTGCTTTCTAAGCTGCCTGTACGGCAGTGAACCACCTCGCCTGGGAACGTGACGTTATTAATCTTTTCTAAGCTGCCTGTACGGCAGTGAACGAGGTGTGCCGACACCGATATTCACTAATCGGTTTCTAAGCTGCCTGTACGGCAGTGAACAAAATCCGCACGGATGCACTGAAAAAGGAAATTTTCTAAGCTGCCTGTACGGCAGTGAACCGCCCCGATTGACCGGCGATGTCTTCCAGGCTTTTCTAAGCTGCCTGTACGGCAGTGAACTGGGCTAAACGTTTTGAAGTTCGTGACGGACTTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP024956|7|7|4065842-4068030|CRISPRCasFinder
TGAATAGGCTGCCTGTACGGCAGTGAAC	GGGTTGCCTCGGCCTGAACAGCGATCTCGCGTG
TTTCTAAGCTACCTGTACGGCAGTGAAC	TTGAAATTAGTGACGTGAGCAGAATCGTAAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGATACTCGGATACGCTCCCAGACCTTATCGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AACACGCCGCGCGATTTTGTCCACAATGCGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTCGAGCGCTGATTCGTCGGTCACTGGATAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCCATAGTCCTCGGAAGGGACGACGATGTGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CATTAATTGACGTCTCTCTATCAATTATCTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCGAGCCTGTATTACAGGTGGTTATGGCGACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACGCTTGATATTGCTTATGGCGTGTTAGTTCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCGGCAAAGATAATCAGGCACTCATCACCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAATGAGCCGGCCAATCTATATCACTACACT
TTTCTAAGCTGCCTGTACTGCAGTGAAC	GGCGCGTCAGTGAAGTGGATGTATCCGTGCCA
TTTCTAAGCTGCCTGTGTGGCAGTGAAC	GCGGGGGCTAATGTGTCTGAGGCTGGTAGATC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCAGACCGCAGCAACTACCAGTTAGCTCAACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGCAATTCGCGCATGAGTTCGCGTCTACGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTTTGTAATCACCTGTACGGCTGGCCCACAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACGGACGCAATCTATGTGCCGTGTAACGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGTCGCAGTATTTGACCCACGACGTGATGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGCTTGCGTTGCTCGTCTGTCAAATTGCGGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGGCGATGGTGTCGTGGTCTGACCCTGCAAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCTGACGGCAACGCCGACGCCGATCCGACACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCATCCGTCCAGACCGTATCGATAGTCTCTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCCTGACTGGCTGGCAATCTCCTGTGTCGCCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CATCGCATTTGGATGCGTGCGATGATATGTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CACCTCGCCTGGGAACGTGACGTTATTAATCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGGTGTGCCGACACCGATATTCACTAATCGG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAAATCCGCACGGATGCACTGAAAAAGGAAAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCCCCGATTGACCGGCGATGTCTTCCAGGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGGGCTAAACGTTTTGAAGTTCGTGACGGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP024956|7|1|4065842-4068030|CRT
TGAATAGGCTGCCTGTACGGCAGTGAAC	GGGTTGCCTCGGCCTGAACAGCGATCTCGCGTG
TTTCTAAGCTACCTGTACGGCAGTGAAC	TTGAAATTAGTGACGTGAGCAGAATCGTAAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGATACTCGGATACGCTCCCAGACCTTATCGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AACACGCCGCGCGATTTTGTCCACAATGCGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTCGAGCGCTGATTCGTCGGTCACTGGATAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCCATAGTCCTCGGAAGGGACGACGATGTGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CATTAATTGACGTCTCTCTATCAATTATCTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCGAGCCTGTATTACAGGTGGTTATGGCGACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACGCTTGATATTGCTTATGGCGTGTTAGTTCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCGGCAAAGATAATCAGGCACTCATCACCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAATGAGCCGGCCAATCTATATCACTACACT
TTTCTAAGCTGCCTGTACTGCAGTGAAC	GGCGCGTCAGTGAAGTGGATGTATCCGTGCCA
TTTCTAAGCTGCCTGTGTGGCAGTGAAC	GCGGGGGCTAATGTGTCTGAGGCTGGTAGATC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCAGACCGCAGCAACTACCAGTTAGCTCAACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGCAATTCGCGCATGAGTTCGCGTCTACGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTTTGTAATCACCTGTACGGCTGGCCCACAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACGGACGCAATCTATGTGCCGTGTAACGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGTCGCAGTATTTGACCCACGACGTGATGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGCTTGCGTTGCTCGTCTGTCAAATTGCGGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGGCGATGGTGTCGTGGTCTGACCCTGCAAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCTGACGGCAACGCCGACGCCGATCCGACACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCATCCGTCCAGACCGTATCGATAGTCTCTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCCTGACTGGCTGGCAATCTCCTGTGTCGCCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CATCGCATTTGGATGCGTGCGATGATATGTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CACCTCGCCTGGGAACGTGACGTTATTAATCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGGTGTGCCGACACCGATATTCACTAATCGG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAAATCCGCACGGATGCACTGAAAAAGGAAAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCCCCGATTGACCGGCGATGTCTTCCAGGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGGGCTAAACGTTTTGAAGTTCGTGACGGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP024956|7|1|4065903-4068030|PILER-CR
TTTCTAAGCTACCTGTACGGCAGTGAAC	TTGAAATTAGTGACGTGAGCAGAATCGTAAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGATACTCGGATACGCTCCCAGACCTTATCGA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AACACGCCGCGCGATTTTGTCCACAATGCGCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGTCGAGCGCTGATTCGTCGGTCACTGGATAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TCCATAGTCCTCGGAAGGGACGACGATGTGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CATTAATTGACGTCTCTCTATCAATTATCTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCGAGCCTGTATTACAGGTGGTTATGGCGACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACGCTTGATATTGCTTATGGCGTGTTAGTTCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCGGCAAAGATAATCAGGCACTCATCACCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAATGAGCCGGCCAATCTATATCACTACACT
TTTCTAAGCTGCCTGTACTGCAGTGAAC	GGCGCGTCAGTGAAGTGGATGTATCCGTGCCA
TTTCTAAGCTGCCTGTGTGGCAGTGAAC	GCGGGGGCTAATGTGTCTGAGGCTGGTAGATC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCAGACCGCAGCAACTACCAGTTAGCTCAACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGCAATTCGCGCATGAGTTCGCGTCTACGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGTTAGGCTCGTCGGTGTAGATCAACTTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTTTGTAATCACCTGTACGGCTGGCCCACAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACGGACGCAATCTATGTGCCGTGTAACGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGTCGCAGTATTTGACCCACGACGTGATGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGCTTGCGTTGCTCGTCTGTCAAATTGCGGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGGCGATGGTGTCGTGGTCTGACCCTGCAAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACCGTCGCTCGCTGGCCACTGTACGATTCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTCTGTTATTCCCCAACTGGCGTATGCCGAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCTGACGGCAACGCCGACGCCGATCCGACACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCATCCGTCCAGACCGTATCGATAGTCTCTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCCTGACTGGCTGGCAATCTCCTGTGTCGCCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CATCGCATTTGGATGCGTGCGATGATATGTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CACCTCGCCTGGGAACGTGACGTTATTAATCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGGTGTGCCGACACCGATATTCACTAATCGG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAAATCCGCACGGATGCACTGAAAAAGGAAAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCCCCGATTGACCGGCGATGTCTTCCAGGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGGGCTAAACGTTTTGAAGTTCGTGACGGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_039310146.1\|4069302_4072599_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP024956.1\|WP_011095188.1\|4078620_4079040_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NZ_CP024956.1\|WP_011095174.1\|4064326_4064734_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP024956.1\|WP_039310149.1\|4058645_4059314_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_039310151.1\|4057570_4058653_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143500
NZ_CP024956.1\|WP_039310139.1\|4074292_4075225_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|187807
NZ_CP024956.1\|WP_039310136.1\|4076261_4076816_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_CP024956.1\|WP_039310134.1\|4077143_4077560_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350229
NZ_CP024956.1\|WP_039296667.1\|4060666_4061281_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP024956.1\|WP_011095175.1\|4064726_4065587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_039293526.1\|4061344_4062538_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP024956.1\|WP_011095172.1\|4063340_4063820_+\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_CP024956.1\|WP_011095167.1\|4059477_4059807_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_039310142.1\|4072964_4074296_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP024956.1\|WP_011095171.1\|4062722_4063220_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|224368
NZ_CP024956.1\|WP_039310137.1\|4075238_4076252_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP024956.1\|WP_011095187.1\|4077556_4077784_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226863
NZ_CP024956.1\|WP_039306464.1\|4059932_4060412_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP024956.1\|WP_039296673.1\|4079057_4081892_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP024956.1\|WP_039296670.1\|4068325_4069306_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_011095188.1\|4078620_4079040_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	2.21723e-62
NZ_CP024956.1\|WP_011095174.1\|4064326_4064734_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.22726e-41
NZ_CP024956.1\|WP_039310151.1\|4057570_4058653_+\|alanine-racemase	gnl\|CDD\|143500	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases. This subfamily is composed mainly of proteobacterial alanine racemases (EC 5.1.1.1), fold type III PLP-dependent enzymes that catalyze the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. hese proteins are similar to other bacterial ARs and are fold type III PLP-dependent enzymes containing contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NZ_CP024956.1\|WP_039310139.1\|4074292_4075225_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187807	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	2.87681e-154
NZ_CP024956.1\|WP_039310136.1\|4076261_4076816_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.89622e-97
NZ_CP024956.1\|WP_039296667.1\|4060666_4061281_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	6.93137e-39
NZ_CP024956.1\|WP_039310134.1\|4077143_4077560_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.87228e-46
NZ_CP024956.1\|WP_039296670.1\|4068325_4069306_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP024956.1\|WP_011095172.1\|4063340_4063820_+\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	3.64329e-80
NZ_CP024956.1\|WP_039310142.1\|4072964_4074296_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	0
NZ_CP024956.1\|WP_039293526.1\|4061344_4062538_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP024956.1\|WP_011095171.1\|4062722_4063220_+\|M48-family-metallopeptidase	gnl\|CDD\|224368	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only].	3.08234e-29
NZ_CP024956.1\|WP_039310137.1\|4075238_4076252_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP024956.1\|WP_011095187.1\|4077556_4077784_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	1.08552e-09
NZ_CP024956.1\|WP_039306464.1\|4059932_4060412_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.56215e-34
NZ_CP024956.1\|WP_039296673.1\|4079057_4081892_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP024956.1\|WP_039310146.1\|4069302_4072599_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0

>NZ_CP024956.1|WP_011095175.1|4064726_4065587_-|hypothetical-protein
MKYDPVLKTLVDDDYRLEDHLDFKKQHADINYQKLHAQLNEINNDNIHAILTAQEATYFLQTLCTPNPNQSWKTAMFGCTDPVSSFAGNIAEAVSVSRIVMEIKGFGVTATEYVGKNGSKYIKLSGYPGVRKYLDATRYLVSNQKILDIGIGTKGIESGIAAGARFCILFSGAYRAIELMLKDEYALTDFFVNLTMDAAKLAISIGVAWGAKAAATSVMVATGGSVIIIAGGIFLLGVAVSFSLLWLDNKYKISETIIKNLKSHKKQYTPYHPDQFFHAWGRYSRG
>NZ_CP024956.1|WP_011095174.1|4064326_4064734_-|DUF1240-domain-containing-protein
MVKVNRPLTGAFAVFIFLLTCFTGWFSFNSYLDILQLNDTIVFSWRVGLMVFGSPLLFYFSYLFFYSAINNEVAKINNKFGGGLFIVMIAGTIISLFSSFYISYNFRAYGYELCPKVSWMDPNKYVKNIALCDEW
>NZ_CP024956.1|WP_011095172.1|4063340_4063820_+|Hcp-family-type-VI-secretion-system-effector
MANLIYASINGQKQGLISSGCSTLDSIGNRYQAGHEDQIQVLGLNHSISRDQNVSHHPINFIKPIDKSSPLLGMAISYNEKVDVTFYFYRVNSAGQLELYYEVALTDASIVDVTCVYPHVIDNNDIMPYEKVQLKYKTIAWNHKIAGTSGYSIWEEMSL
>NZ_CP024956.1|WP_011095171.1|4062722_4063220_+|M48-family-metallopeptidase
MTQLRYLNGYPPTIVAQAQTLVDQGKLGLWLEKRYPDRHQIQSDKSLYQFVAELKQRYLKNAPAISKVLYDNKQNPIKGTLGTNTFVARVQGGKLKSNNEIRIATLFRDGPEDFLRMIVVHELAHLKEKDHNKAFYQLCCHMDPDYHQLEFDMRIWLNWREINAG
>NZ_CP024956.1|WP_039293526.1|4061344_4062538_+|aspartate/tyrosine/aromatic-aminotransferase
MFQNVDTYAGDPILSLMEKFKQDPRADKINLSIGLYYNEQNIIPQLRSVSAAESSLRQPAQSANSYLPMEGLQPYRTAIQHLLFGESHAALEAGRIATIQTLGGSGALKVGADFLKRYFPASEVWVSDPTWENHIAIFEGAGFKVHTYPYFDGESLGVKFDAMLATLQTLPARSIVLLHPCCHNPTGSDLTTEQWDRVIEVIIQRELIPFMDIAYQGFGLGIEQDAYAIRAVASAGVPALIANSFSKIFSLYSERVGGLSVVCDDADSAQRVLGQLKATVRRNYSSPPNFGAQVVSKVLNDVQLNADWKAEVEEMRTRILSMRQELVSALKNALPNRNVDYLLTQRGMFSYTGFSPEQVDRLREEFGVYLIASGRMCMAGLNHSNVQRVAAAFAAIQ
>NZ_CP024956.1|WP_039296667.1|4060666_4061281_+|YitT-family-protein
MDNVIPTQKISHTLLEDVLAILIGTLMVSFGIILLRQAGTLTGGTAGIAFLVHYLTNVSFGVAFFLLNLPFYYLAVRRMGWKFTVKTFSAVGLVSLFSDLHPLFIHFDQLNPFYATLFGNIITGIGFVVLFRHKASLGGVNILALYLQDKYGLRAGKLQMGVDVVIVLTSLFVVSIPMLIASILGATILNLIIAMNHRPGRYAA
>NZ_CP024956.1|WP_039306464.1|4059932_4060412_+|Lrp/AsnC-family-transcriptional-regulator
MYNIDDFDLKILTLLQTNGRLTNQELSELVGLSASQCSRRRIALEQAQLILGYHARLSPNAVGLECLGLIEVRLINHTSEYVERFHQMLGEVDAIIDAYKTTGDADYLLKVAVADLPGLSTLISQILSQNKSVAHLKTSVVLNRLKENGLITPEPPALP
>NZ_CP024956.1|WP_011095167.1|4059477_4059807_+|hypothetical-protein
MKKMIVLTFGIIALAGCATKQYPQAATVTGEESGIFDCKAIKQEIAKTRSIQNEIESTGEFDGRTVLGVLGDFGIGNGMAKGEARKKAQARLTQLQALETVKCSINSNS
>NZ_CP024956.1|WP_039310149.1|4058645_4059314_+|hypothetical-protein
MSKNGLMGFSRQASGLPTFRLVVYYAASWLAVSAILTLFALINFYTLKPTDVGGTLFGGMFGAIFDLIYWSCAASGFCFLALFQLSGWRIAWILAGLVQIGISVLWRIQYWQAYENEELILSPTTGELYVSMLVGVAMTTIGVVKYRHAQHDPIDPRSTQTKTVATKTISTKTITAFVLIALYLALPLYLYLREPLPYCAFSPSGQLLTVCLGESDERIIVE
>NZ_CP024956.1|WP_039310151.1|4057570_4058653_+|alanine-racemase
MKTATAVISRRALRHNLQRIRQLAPGSQIVAVVKANAYGHGMIESAHTFCDADCYGVARLSEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHSPEQLAALEQSTLPQPIRVWMKLDTGMHRLGVLPEHADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQLACFDAFTQGKPGAQSIAASGGILLWPQAHRDRVRPGIILYGVSPLDNEDAAHFGFQPAMTFTSHLIAVREHKAGEAVGYGGTWTSPRDTRLGVVAVGYGDGYPRCAPAGTPVLINGREVPLSGRVSMDMITVDLGPDAQDKVGDEVILWGPTLSVERIAAHTGASAYELITRLTQRTALEYVDGE
>NZ_CP024956.1|WP_039296670.1|4068325_4069306_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNAFSPSDLKTILHSKRANVYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMIGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFDDEKRLAAAIAFQQVRIAQIRQHWLGSRLFRESRFTFKSDHLQALLDRYEKGLTDCRTSNDVLVQEAMMTKALYKLAANTVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVSTWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMEGEDEQEFRQRCLTAFQQSEALDVMIGSLQDVASKLSQVAR
>NZ_CP024956.1|WP_039310146.1|4069302_4072599_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRILDQFAERKGERSWQTAITQEGLNTLRKLLRKTARRNTAVACHWVRSTNHTELLWVVGNLRRFNAQGSVPTNTTSRDVLRTKDENPWHSAEVFSLLAAIAGLFHDVGKANMLFQAGLSGTGPRSQPYRHEWVSLRLFQAFVGEQDDKAWLTTLSTITSEAEVALLATLQQDKPTFSDSPFRTLPPLAQTIAWLIVSHHRLPVFNKSTELAPNSRPPQLDYAETWLTDHLSPQWNALNHCQTNCLPSEREQNWQFPNGTPLRSTVWREKARKFAGRALKLPSFMHFSQLEQRLTVHLARLALMLADHHYSAGAATVGWQDITYPVWANTDRKTGEYKQRLDEHCVGVGQNALLLGRSLPHLRDTLPAITRHKGFRQRSTHPRFRWQDRAFDLACSIRDASKQHGFFGINMASTGRGKTFANARIMYGLSDESIGCRFSVALGLRTLTLQTGDALRQRLKLDEDDLAVLIGSQAVQDLHEMRQENEARQQNTPQTGSESADPLFSEHQYVRYDGSLDDGRLKAWLERSPTLHQLLSAPVLITTIDHLMPATEGLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWAGMLGSRVLLSSATLPPALIRALFDAYLDGRAAWQQAYGTPNTPLNVCCGWFDEFDCQHEQYGDVKDFMVSHDAFVHQRLKNLTKDELPLRFATIVPVSSSSKNKDDVHLAVAQAIHPRMFDLHSQHHQQHENGKTVSLGLVRMANIDPLVAIARQLIAIPSPPDTCIHYCIYHSQHPLAMRSHIEQRLDAALMRNDINALWQVEEIRQAIENSPQQHHVFVVLATSVAEVGRDHDYDWAIVEPSSMRSLIQLAGRILRHRQDKQYVPKAPNIYLLSHNIRALRGKDIAYCKPGFESQDDSLDTHDLHQLLQEKEYRHLSAAPRIVQPTSFAKPLSLVALEHAVLGKTLLGLKNQKLDDLKRPPAAFWWRAHPHWNGELQRRTPFRQSAKDEAYYLWIADDDEEPVFMVQDDGPSGWKQSDIARPVTLDMAEGVSAWIEQDYHALYQRLAEEKQWELSWVSARFGEIRLREEEDWYWHPLLGVFGALS
>NZ_CP024956.1|WP_039310142.1|4072964_4074296_+|type-I-F-CRISPR-associated-protein-Csy1
MRNGLPEFILSYINNRKQAKLDAFDKEAEKKRATLSGEALAVAELELAQARREIELKHEVRNWLTDAASRAGQISLVTHALKFTHSDAKGSSVFSAETVADAKTLSTATLEQPAIDAVGNAAALDVAKLLQTEHDGDSLVAALQRGDHSALEALAENPEQLAQWLTGFQQVFTNRQPSSHKLAKQIYFPLASGEYHLLSPLYSSSLAQALYQRINAVRFGDEAKAIRQAQRTNQWHDQLSISYPNLAVQNMGGTKPQNISALNSSRSGRSYLLSSAPPQWNSIEKPPQQHESIFRPRGEVDYHTRATLAQMQRFLLSVKDVENNRDIRQQRLRYLDQLIDQLFFYVASVQNLPVGWSVESELKRAQQLWLDPYRAETDTIFRREREAGDWQQAVAYDFGRWLNRRLKHENLIFGEVERREWSTAALFKRRMREMESALKEELA
>NZ_CP024956.1|WP_039310139.1|4074292_4075225_+|type-I-F-CRISPR-associated-protein-Csy2
MSTLIILRRIQVENANAIAGLTYGFPAITHFLGFTHALSRKLQASHGLTLEGCGVVSHQHQLHAYGSSWERSFALTRNPLTKEAKTAAFNEEGRMHMTVSLLIRCDGQIPADTTALCEHLKQQAQCQRLAGGTVIDIERVTVQSLPVDETETRGVMRRLLPGFVLRDRTSLLHRHFQTLQQANPQAEMIDAWLDFAALKMQSERDPSDNTIQWKYLPKPGDGGFLTPLMIGYRAISPLYAPGEVDKTRDPHTPFCFAEAAYGIGEWQGAHRISDIRQILWEYDYQNGDYHCRQLADTHSVAEDTSYEFDY
>NZ_CP024956.1|WP_039310137.1|4075238_4076252_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAATTLKTASVLAFERKLANSDALMYAGNWAQQDNWTAIAIQEKSVRGTISNRLKNALTSDPAKLDAEIQKANLQKVDVAALPFGADTLKVVFTLRVLGNLAQPSVCNDQDYQSALGDIITGYAQEQGFGSLAARYAENIANGRFLWRNRIGAEAIRVVVTKKGERSWEFNGEDYSLRQFSQPTGDLAALAQAIEEGLAGDASALFTVEAYVQLGNGQEVFPSQELVLDEKARNGKSKILYQVNDVAAIHSQKIGNALRTIDDWYPAAAEAGPIAVEPYGSVTSRGKAYRQPKEKMDFYTLLDNWVIKGDVPMPEQQHYVIATLIRGGVFGEKGE
>NZ_CP024956.1|WP_039310136.1|4076261_4076816_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIDIRVQPDPEFTASQLLNALFAKLHRALGQLADGKIGISFPEVGKTLGECLRLHGTEDALSVLEKTAWLKGLRDYTQVSECNPVPNGVKFRTVRRVQLKSSAERLRRRSVSKDWLTAAEAAARIPDAVEKRSALPFVQIKSLSNGQMFFVFVEHGPLQNAPTAGRFSSYGLSTEATVPWF
>NZ_CP024956.1|WP_039310134.1|4077143_4077560_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSRLFMLDTNICSFIMREHPAAVIEKLQQCTLRRDRIVVSAITYAEMRFGAVGKKASPRHMLLVDAFCRRLDAILPWDSAAVDATTKIKIALAAAGTPIGPNDTAIAGHAISVKAVLVTNNLREFERVPGLMLEDWVK
>NZ_CP024956.1|WP_011095187.1|4077556_4077784_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRIVSVFKNGNNRAIRLPRDMDFEGVNELEIVREGDTIMLRPVKPNWHSFLQEERADADFMTERQDVVEEGRFEL
>NZ_CP024956.1|WP_011095188.1|4078620_4079040_-|YjbQ-family-protein
MWTQYEIRLKPKARGFHLVTDEILAQVVALRQIKVGLMHVFIKHTSAALTINENADPTVRQDFESFFNRLVPEDEPYYRHTYEGSDDMPAHLKGSLLGNSLTIPITNGRLNIGTWQGIYLCEHRNHGGSRSLVVTLNGE
>NZ_CP024956.1|WP_039296673.1|4079057_4081892_-|excinuclease-ABC-subunit-UvrA
MDKIEVRGARTHNLKNINLIIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPEHDVPLDAQTVSQMVDNVLAQPEGKRLMLLAPIVKDRKGEHSKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALDLSGGSVVVADMDDPTQPELLFSANFACPVCGYSMHELEPRMFSFNNPAGACPSCDGLGVQQFFDPARVVQNAELSLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDVDAPFEGLSAAVQKVILYGSGKENVEFKYINDRGDTSVRRHPFEGVLHNMERRYKETESTAVREELAKFISNRSCASCGGTRLREEARNVFVEQTTLPQISDMSIGHAMTFFKNMKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLVHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGQIVAEGTMDEIMAVPGSLTGQFLSGKRKIEIPKQRVPADPTKVLKLIGAKGNNLKDVTLTLPVGLFTCVTGVSGSGKSTLINDTLFPLAQRQLNGATLAEPAAYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPESRTRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIKYKGKGIHEVLDMTIEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIEQLLTVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVADCEQSHTARFLRPILAREA

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Crispr_ID: NZ_CP024956_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024956_8

4078072-4078579

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGTATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTANAGGCAGCTTAGAAA	CRT
TTTCTAAGCTGCCTATACGGCAGTGAAC	PILER-CR

8 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_CP024956_8

>merge|NZ_CP024956|8|4078072-4078579|CRISPRCasFinder,CRT,PILER-CR
GTTCACTGCCGTATAGGCAGCTTAGAAATGGCTGAATGAGGCCGTGGAGGCTGCGGCTACGTTCACTGCCGTATAGGCAGCTTAGAAACAGTCGCTACCAAGCGCATTAAGTGCAGGGACGTTCACTGCCGTATAGGCAGCTTAGAAATGGTCTTCACTCAACCCTTGCGCACTGGCCACGTTCACTGCCGTATAGGCAGCTTAGAAAACCTGGAAGACGCACTACGCCTGAATCCGCTGGTTCACTGCCGTATAGGCAGCTTAGAAATTGCTTTAACAACCACCGTCTGAACTCACTGTGTTCACTGCCGTATAGGCAGCTTAGAAACAGCCAGCTTATCAGGGGGCCATCAAGCCATCGTTCACTGCCGTACAGGCAGCTTAGAAAAAGCAAATAGACTCCATATTTGAGCGTAACGGGTTCACTGCCGTACAGGCAGCTTAGAAAATCGCAGTGATGAAGATCCCCGCAGCCTCCCCGTTCACTGCCGTGCAGGCAGTTCAGGGC

>NZ_CP024956|8|8|4078072-4078579|CRISPRCasFinder
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGCTGAATGAGGCCGTGGAGGCTGCGGCTAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	CAGTCGCTACCAAGCGCATTAAGTGCAGGGAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGTCTTCACTCAACCCTTGCGCACTGGCCAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	ACCTGGAAGACGCACTACGCCTGAATCCGCTG
GTTCACTGCCGTATAGGCAGCTTAGAAA	TTGCTTTAACAACCACCGTCTGAACTCACTGT
GTTCACTGCCGTATAGGCAGCTTAGAAA	CAGCCAGCTTATCAGGGGGCCATCAAGCCATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAGCAAATAGACTCCATATTTGAGCGTAACGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCGCAGTGATGAAGATCCCCGCAGCCTCCCC
GTTCACTGCCGTGCAGGCAGTTCAGGGC

>NZ_CP024956|8|2|4078072-4078579|CRT
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGCTGAATGAGGCCGTGGAGGCTGCGGCTAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	CAGTCGCTACCAAGCGCATTAAGTGCAGGGAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGTCTTCACTCAACCCTTGCGCACTGGCCAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	ACCTGGAAGACGCACTACGCCTGAATCCGCTG
GTTCACTGCCGTATAGGCAGCTTAGAAA	TTGCTTTAACAACCACCGTCTGAACTCACTGT
GTTCACTGCCGTATAGGCAGCTTAGAAA	CAGCCAGCTTATCAGGGGGCCATCAAGCCATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAGCAAATAGACTCCATATTTGAGCGTAACGG
GTTCACTGCCGTACAGGCAGCTTAGAAA	ATCGCAGTGATGAAGATCCCCGCAGCCTCCCC
GTTCACTGCCGTGCAGGCAGTTCAGGGC

>NZ_CP024956|8|2|4078192-4078519|PILER-CR
GTTCACTGCCGTATAGGCAGCTTAGAAA	TGGTCTTCACTCAACCCTTGCGCACTGGCCAC
GTTCACTGCCGTATAGGCAGCTTAGAAA	ACCTGGAAGACGCACTACGCCTGAATCCGCTG
GTTCACTGCCGTATAGGCAGCTTAGAAA	TTGCTTTAACAACCACCGTCTGAACTCACTGT
GTTCACTGCCGTATAGGCAGCTTAGAAA	CAGCCAGCTTATCAGGGGGCCATCAAGCCATC
GTTCACTGCCGTACAGGCAGCTTAGAAA	AAGCAAATAGACTCCATATTTGAGCGTAACGG
GTTCACTGCCGTACAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024956.1\|WP_011095245.1\|4086799_4088218_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP024956.1\|WP_011095193.1\|4085704_4086136_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP024956.1\|WP_039293554.1\|4086276_4086708_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP024956.1\|WP_039310139.1\|4074292_4075225_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|187807
NZ_CP024956.1\|WP_039310136.1\|4076261_4076816_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_CP024956.1\|WP_039310134.1\|4077143_4077560_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350229
NZ_CP024956.1\|WP_039296673.1\|4079057_4081892_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP024956.1\|WP_011095175.1\|4064726_4065587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024956.1\|WP_011095174.1\|4064326_4064734_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP024956.1\|WP_039296670.1\|4068325_4069306_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP024956.1\|WP_011095188.1\|4078620_4079040_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|376651
NZ_CP024956.1\|WP_039293557.1\|4089308_4090361_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP024956.1\|WP_011095187.1\|4077556_4077784_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226863
NZ_CP024956.1\|WP_039310137.1\|4075238_4076252_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP024956.1\|WP_100675261.1\|4088259_4089309_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP024956.1\|WP_039293548.1\|4082946_4084803_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|224490
NZ_CP024956.1\|WP_011095190.1\|4082137_4082701_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236362
NZ_CP024956.1\|WP_039295248.1\|4084994_4085453_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP024956.1\|WP_039310142.1\|4072964_4074296_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP024956.1\|WP_039310146.1\|4069302_4072599_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201

Protein	Function_ID	Function_description	E-value
NZ_CP024956.1\|WP_011095245.1\|4086799_4088218_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	7.38875e-138
NZ_CP024956.1\|WP_011095193.1\|4085704_4086136_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.49874e-28
NZ_CP024956.1\|WP_039293554.1\|4086276_4086708_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.10938e-10
NZ_CP024956.1\|WP_039310139.1\|4074292_4075225_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187807	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	2.87681e-154
NZ_CP024956.1\|WP_039310136.1\|4076261_4076816_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	2.89622e-97
NZ_CP024956.1\|WP_039293548.1\|4082946_4084803_+\|amidohydrolase	gnl\|CDD\|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	4.05038e-140
NZ_CP024956.1\|WP_039296673.1\|4079057_4081892_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP024956.1\|WP_039310134.1\|4077143_4077560_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.87228e-46
NZ_CP024956.1\|WP_011095174.1\|4064326_4064734_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	1.22726e-41
NZ_CP024956.1\|WP_039296670.1\|4068325_4069306_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP024956.1\|WP_011095188.1\|4078620_4079040_-\|YjbQ-family-protein	gnl\|CDD\|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	2.21723e-62
NZ_CP024956.1\|WP_039293557.1\|4089308_4090361_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.02388e-76
NZ_CP024956.1\|WP_011095187.1\|4077556_4077784_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	1.08552e-09
NZ_CP024956.1\|WP_039310137.1\|4075238_4076252_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP024956.1\|WP_100675261.1\|4088259_4089309_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.57808e-77
NZ_CP024956.1\|WP_011095190.1\|4082137_4082701_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	4.63274e-107
NZ_CP024956.1\|WP_039295248.1\|4084994_4085453_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.63809e-16
NZ_CP024956.1\|WP_039310142.1\|4072964_4074296_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	0
NZ_CP024956.1\|WP_039310146.1\|4069302_4072599_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0

>NZ_CP024956.1|WP_011095187.1|4077556_4077784_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRIVSVFKNGNNRAIRLPRDMDFEGVNELEIVREGDTIMLRPVKPNWHSFLQEERADADFMTERQDVVEEGRFEL
>NZ_CP024956.1|WP_039310134.1|4077143_4077560_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSRLFMLDTNICSFIMREHPAAVIEKLQQCTLRRDRIVVSAITYAEMRFGAVGKKASPRHMLLVDAFCRRLDAILPWDSAAVDATTKIKIALAAAGTPIGPNDTAIAGHAISVKAVLVTNNLREFERVPGLMLEDWVK
>NZ_CP024956.1|WP_039310136.1|4076261_4076816_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYIDIRVQPDPEFTASQLLNALFAKLHRALGQLADGKIGISFPEVGKTLGECLRLHGTEDALSVLEKTAWLKGLRDYTQVSECNPVPNGVKFRTVRRVQLKSSAERLRRRSVSKDWLTAAEAAARIPDAVEKRSALPFVQIKSLSNGQMFFVFVEHGPLQNAPTAGRFSSYGLSTEATVPWF
>NZ_CP024956.1|WP_039310137.1|4075238_4076252_+|type-I-F-CRISPR-associated-protein-Csy3
MAKAATTLKTASVLAFERKLANSDALMYAGNWAQQDNWTAIAIQEKSVRGTISNRLKNALTSDPAKLDAEIQKANLQKVDVAALPFGADTLKVVFTLRVLGNLAQPSVCNDQDYQSALGDIITGYAQEQGFGSLAARYAENIANGRFLWRNRIGAEAIRVVVTKKGERSWEFNGEDYSLRQFSQPTGDLAALAQAIEEGLAGDASALFTVEAYVQLGNGQEVFPSQELVLDEKARNGKSKILYQVNDVAAIHSQKIGNALRTIDDWYPAAAEAGPIAVEPYGSVTSRGKAYRQPKEKMDFYTLLDNWVIKGDVPMPEQQHYVIATLIRGGVFGEKGE
>NZ_CP024956.1|WP_039310139.1|4074292_4075225_+|type-I-F-CRISPR-associated-protein-Csy2
MSTLIILRRIQVENANAIAGLTYGFPAITHFLGFTHALSRKLQASHGLTLEGCGVVSHQHQLHAYGSSWERSFALTRNPLTKEAKTAAFNEEGRMHMTVSLLIRCDGQIPADTTALCEHLKQQAQCQRLAGGTVIDIERVTVQSLPVDETETRGVMRRLLPGFVLRDRTSLLHRHFQTLQQANPQAEMIDAWLDFAALKMQSERDPSDNTIQWKYLPKPGDGGFLTPLMIGYRAISPLYAPGEVDKTRDPHTPFCFAEAAYGIGEWQGAHRISDIRQILWEYDYQNGDYHCRQLADTHSVAEDTSYEFDY
>NZ_CP024956.1|WP_039310142.1|4072964_4074296_+|type-I-F-CRISPR-associated-protein-Csy1
MRNGLPEFILSYINNRKQAKLDAFDKEAEKKRATLSGEALAVAELELAQARREIELKHEVRNWLTDAASRAGQISLVTHALKFTHSDAKGSSVFSAETVADAKTLSTATLEQPAIDAVGNAAALDVAKLLQTEHDGDSLVAALQRGDHSALEALAENPEQLAQWLTGFQQVFTNRQPSSHKLAKQIYFPLASGEYHLLSPLYSSSLAQALYQRINAVRFGDEAKAIRQAQRTNQWHDQLSISYPNLAVQNMGGTKPQNISALNSSRSGRSYLLSSAPPQWNSIEKPPQQHESIFRPRGEVDYHTRATLAQMQRFLLSVKDVENNRDIRQQRLRYLDQLIDQLFFYVASVQNLPVGWSVESELKRAQQLWLDPYRAETDTIFRREREAGDWQQAVAYDFGRWLNRRLKHENLIFGEVERREWSTAALFKRRMREMESALKEELA
>NZ_CP024956.1|WP_039310146.1|4069302_4072599_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISECNKRALVETRRILDQFAERKGERSWQTAITQEGLNTLRKLLRKTARRNTAVACHWVRSTNHTELLWVVGNLRRFNAQGSVPTNTTSRDVLRTKDENPWHSAEVFSLLAAIAGLFHDVGKANMLFQAGLSGTGPRSQPYRHEWVSLRLFQAFVGEQDDKAWLTTLSTITSEAEVALLATLQQDKPTFSDSPFRTLPPLAQTIAWLIVSHHRLPVFNKSTELAPNSRPPQLDYAETWLTDHLSPQWNALNHCQTNCLPSEREQNWQFPNGTPLRSTVWREKARKFAGRALKLPSFMHFSQLEQRLTVHLARLALMLADHHYSAGAATVGWQDITYPVWANTDRKTGEYKQRLDEHCVGVGQNALLLGRSLPHLRDTLPAITRHKGFRQRSTHPRFRWQDRAFDLACSIRDASKQHGFFGINMASTGRGKTFANARIMYGLSDESIGCRFSVALGLRTLTLQTGDALRQRLKLDEDDLAVLIGSQAVQDLHEMRQENEARQQNTPQTGSESADPLFSEHQYVRYDGSLDDGRLKAWLERSPTLHQLLSAPVLITTIDHLMPATEGLRGGHQIAPMLRLLTSDLVLDEPDDFGLEDLPALCRLVNWAGMLGSRVLLSSATLPPALIRALFDAYLDGRAAWQQAYGTPNTPLNVCCGWFDEFDCQHEQYGDVKDFMVSHDAFVHQRLKNLTKDELPLRFATIVPVSSSSKNKDDVHLAVAQAIHPRMFDLHSQHHQQHENGKTVSLGLVRMANIDPLVAIARQLIAIPSPPDTCIHYCIYHSQHPLAMRSHIEQRLDAALMRNDINALWQVEEIRQAIENSPQQHHVFVVLATSVAEVGRDHDYDWAIVEPSSMRSLIQLAGRILRHRQDKQYVPKAPNIYLLSHNIRALRGKDIAYCKPGFESQDDSLDTHDLHQLLQEKEYRHLSAAPRIVQPTSFAKPLSLVALEHAVLGKTLLGLKNQKLDDLKRPPAAFWWRAHPHWNGELQRRTPFRQSAKDEAYYLWIADDDEEPVFMVQDDGPSGWKQSDIARPVTLDMAEGVSAWIEQDYHALYQRLAEEKQWELSWVSARFGEIRLREEEDWYWHPLLGVFGALS
>NZ_CP024956.1|WP_039296670.1|4068325_4069306_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MDNAFSPSDLKTILHSKRANVYYLQHCRILVNGGRVEYVTEEGNQSLYWNIPIANTSVVMLGTGTSVTQAAMREFARAGVMIGFCGGGGTPLFAANEAEVAVSWLSPQSEYRPTEYLQDWVSFWFDDEKRLAAAIAFQQVRIAQIRQHWLGSRLFRESRFTFKSDHLQALLDRYEKGLTDCRTSNDVLVQEAMMTKALYKLAANTVSYGDFTRAKRGGGTDLANRFLDHGNYLAYGLAAVSTWVLGLPHGLAVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMEGEDEQEFRQRCLTAFQQSEALDVMIGSLQDVASKLSQVAR
>NZ_CP024956.1|WP_011095175.1|4064726_4065587_-|hypothetical-protein
MKYDPVLKTLVDDDYRLEDHLDFKKQHADINYQKLHAQLNEINNDNIHAILTAQEATYFLQTLCTPNPNQSWKTAMFGCTDPVSSFAGNIAEAVSVSRIVMEIKGFGVTATEYVGKNGSKYIKLSGYPGVRKYLDATRYLVSNQKILDIGIGTKGIESGIAAGARFCILFSGAYRAIELMLKDEYALTDFFVNLTMDAAKLAISIGVAWGAKAAATSVMVATGGSVIIIAGGIFLLGVAVSFSLLWLDNKYKISETIIKNLKSHKKQYTPYHPDQFFHAWGRYSRG
>NZ_CP024956.1|WP_011095174.1|4064326_4064734_-|DUF1240-domain-containing-protein
MVKVNRPLTGAFAVFIFLLTCFTGWFSFNSYLDILQLNDTIVFSWRVGLMVFGSPLLFYFSYLFFYSAINNEVAKINNKFGGGLFIVMIAGTIISLFSSFYISYNFRAYGYELCPKVSWMDPNKYVKNIALCDEW
>NZ_CP024956.1|WP_011095188.1|4078620_4079040_-|YjbQ-family-protein
MWTQYEIRLKPKARGFHLVTDEILAQVVALRQIKVGLMHVFIKHTSAALTINENADPTVRQDFESFFNRLVPEDEPYYRHTYEGSDDMPAHLKGSLLGNSLTIPITNGRLNIGTWQGIYLCEHRNHGGSRSLVVTLNGE
>NZ_CP024956.1|WP_039296673.1|4079057_4081892_-|excinuclease-ABC-subunit-UvrA
MDKIEVRGARTHNLKNINLIIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPEHDVPLDAQTVSQMVDNVLAQPEGKRLMLLAPIVKDRKGEHSKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALDLSGGSVVVADMDDPTQPELLFSANFACPVCGYSMHELEPRMFSFNNPAGACPSCDGLGVQQFFDPARVVQNAELSLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDVDAPFEGLSAAVQKVILYGSGKENVEFKYINDRGDTSVRRHPFEGVLHNMERRYKETESTAVREELAKFISNRSCASCGGTRLREEARNVFVEQTTLPQISDMSIGHAMTFFKNMKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLVHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGQIVAEGTMDEIMAVPGSLTGQFLSGKRKIEIPKQRVPADPTKVLKLIGAKGNNLKDVTLTLPVGLFTCVTGVSGSGKSTLINDTLFPLAQRQLNGATLAEPAAYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPESRTRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIKYKGKGIHEVLDMTIEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIEQLLTVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVADCEQSHTARFLRPILAREA
>NZ_CP024956.1|WP_011095190.1|4082137_4082701_+|single-stranded-DNA-binding-protein
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGALQTRKWADQAGVERYTTEVVVNVGGTMQMLGGRQGGGAPAGGGNAGGGQPQGGWGQPQQPQGGNQFSGGAQAQQRPAQNASSSQNNAPAQSNEPPMDFDDDIPF
>NZ_CP024956.1|WP_039293548.1|4082946_4084803_+|amidohydrolase
MDKNSAHRTANKNLSQNTANKAPSPSSGNATTDYSLPPNTSFRLAALAVTVSGLLFSSSTLMAAETAETADLVLRNGNIYTVNQGQPWAEAVAVRDGRYVFIGSNAQAAEFIGPKTQVVDLNGSMAMPGINDVHAHPLDGGYEDIYSCNFSQKSSLDDILSQVSECAQKAGPGEWVIGSAWGSPRMAELSTTEALAKLDKVSNGRPVILRDDSYHNRWINSEAMRLAAITAQSVSPAGGVIVKDAKTGEPTGLLQEFPAFQHVQSLVPVRTEEQRLTSGRGATKTMVSLGITGVQEAVSSEVNLRIWSKIDRAEGLPLRIIGSIVSTPLLDEGAAGLELVARRDVYRTTNFFPDRFKFVLDGVPPAHTAKLIEPYLPTQAHGDHYHGDTHYTTEQVVEILSKLDKQGISTKLHAAGDGSLRLALDAVEQVRKINGPNGPMHQIAHTHLISPQDMPRFAQLRVAADLSPMLWFPSDMTNASVVTIGEERMKDFVPTVKLLRSGAVVAGGSDWPAGGPTPSPWIGIEGLVTRQNPLGDAPGTLAPEEAVDLPEAIRIYTINSAKAMGIEKETGSVELGKSADLIVLDRHLFNVPIKQVHRANVVKTYFKGQLVHSAPEKS
>NZ_CP024956.1|WP_039295248.1|4084994_4085453_+|GNAT-family-N-acetyltransferase
MMNSDQEIMVNPVEPDDYNQWLPYWESYQTFYNVQLTDEVTETTWDRFFKADIPVHCAVAREGLRIIGFVHFVFHDSTWGVNRYCYLEDLFVDPTTRGKNVGKKLIEYVREKAQEKHCVRLYWHTQETNKTAQRLYDWVAEKPGVIEYRMPL
>NZ_CP024956.1|WP_011095193.1|4085704_4086136_-|carboxymuconolactone-decarboxylase-family-protein
MSMLRLPYQTLSAEAYQGFGIAKKALNKSSLGKQLIELVYLRVSQINGCAFCLEMHASALRADGVPDAKLDSLAGWRVSEQFNERERVALAWTESLVDVARSHAPDEDFEPLKAHFSDAEIADLSFAVALMSAFNRLAIGMRQ
>NZ_CP024956.1|WP_039293554.1|4086276_4086708_-|GNAT-family-N-acetyltransferase
MSTFRLSLIESDQDYLACFDVMRELRPHLPDAATFTAQARRQAGQGYRLLAAWQDDLVMGLVGYRVQENLLYGRFLYVDDLVAAVGVRDQGLGGQLIEAMREEAQRQNCAHLVLDTALSNALAQRFYFRQGLLSKGLHFSQAL
>NZ_CP024956.1|WP_011095245.1|4086799_4088218_+|PLP-dependent-aminotransferase-family-protein
MDMQQLKPSREHDAPLYLQLYRRYRDAIIARKLHPGDRVPSVRSLASELNLARGTVEMAYQMLASEGYFLTRGPAGTIVSPQLEKLTESGYSTTSLSQIPSRPQIETAQVQPFQLGLPALDAFPRKTWARLAGHNLRTLDTAAMISPDPAGYEPLRRAIATYLGISRGITCTHEQVFITAGYRGALELVCRTLLQPGDIGWFEDPGYIFARQFLARAGMHLEPVPVDEEGLNVDIGQQRAAEARFAVVTPTHQSPMGMALSLPRRLQLLEWASHHRSWIIEDDYDSEFRYHGRPLPALKSLDRDGRVLYTGTFSKVLFPGLRLAYLVVPEPQIERFRDTANHFCCAGSILPQATVANFMEQGHFARHLRRMRSLYAIRRGYLVDELLQALGSHLTVQPQAGGIHVLATLTARGNDQSLAAAAQSHGLAIQALNDWRTSKTSRGGLLMGFTNVTEPAMAKALVHRLAAAIGLS
>NZ_CP024956.1|WP_100675261.1|4088259_4089309_-|LacI-family-transcriptional-regulator
MATLKDIADRAGVSISTVSRALNGTAPISAKVRQHIMAIATEQGYPLHKVGKATVAPTEPLRHILLATPRNLMLESEYNLVSLTLINALKTLCLQRSIQLRPFLGEHDTINEQQLLRELQGGKESGILIVNDDHPTLLNAVAESGIPAVLINGEDPSMRLSSVTPANHYAAAAAVRYLIDQGHTRILHLTWTSRMTIKQRERGYRDALAQAGIAVDDDLILSLPDFHPRTARDALLRWLTANPDRLGVTAIFCAADNQAIGVIDALYQHGLRVPEDISVMGMDDILPFDMLPVSLTTVHLPFETIARAALQLLAQQMMPAQALGIAQRTELAGQVVVRESVRRVGTTTG
>NZ_CP024956.1|WP_039293557.1|4089308_4090361_-|carbohydrate-ABC-transporter-permease
MMKIIAFLTRTRHPGRIHITDIMSWVWLVVGTLLVMIPVMWAAMSSFKTPAEINRFPPSFLPQAADTITLPEYPKPLELWQVKQEDGEAKTMALVRRIGLIAQLVNPDVPSEVVRVSTKDLVPMKALHLETENYTTPITKFHFATYLKNTVFVTVMATLLTLLLSSMAAFALSKYEFCGRGTVLTLFLSTMMIPLSVVMVPTFLVVIGLNMGDNLWGVIIPTIATPTGVFLLRQYMLTIPDELIEAARIDAASEFRIYWKIILPLTAPALAVLAIFSVIWRWNDFLWPLIVLSSQDNFTLQIGLNAFQGQFSVQWHYILAMTMLSLLPVTAVFVFLQKYITTGIANTGMK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024956_7	7.9\|4066351\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066351-4066382	32	KC170283	Uncultured bacterium plasmid pDS1, complete sequence	34243-34274	1	0.969
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_CP034939	Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence	12783-12814	2	0.938
NZ_CP024956_7	7.16\|4066771\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066771-4066802	32	MN187550	Escherichia phage phiv142-3, complete genome	18100-18131	5	0.844
NZ_CP024956_7	7.16\|4066771\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066771-4066802	32	JQ011317	Escherichia phage TL-2011b, complete genome	20358-20389	5	0.844
NZ_CP024956_7	7.16\|4066771\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066771-4066802	32	KM389361	UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00002 genomic sequence	3500-3531	5	0.844
NZ_CP024956_8	8.4\|4078280\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4078280-4078311	32	MH338238	Mycobacterium phage Michley, complete genome	37723-37754	6	0.812
NZ_CP024956_7	7.20\|4067011\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067011-4067042	32	NZ_CP031083	Paracoccus yeei strain CCUG 32053 plasmid pYEE5, complete sequence	26662-26693	7	0.781
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	252601-252632	7	0.781
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_CP031409	Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence	26276-26307	7	0.781
NZ_CP024956_8	8.4\|4078280\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4078280-4078311	32	MK494116	Mycobacterium phage Dulcie, complete genome	38394-38425	7	0.781
NZ_CP024956_8	8.5\|4078340\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4078340-4078371	32	AJ564013	Bacteriophage PY54 complete genome	40511-40542	7	0.781
NZ_CP024956_8	8.5\|4078340\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4078340-4078371	32	NC_005069	Yersinia phage PY54, complete genome	40511-40542	7	0.781
NZ_CP024956_7	7.10\|4066411\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066411-4066442	32	MN850583	Escherichia phage glasur, complete genome	22093-22124	8	0.75
NZ_CP024956_7	7.22\|4067131\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067131-4067162	32	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	146946-146977	8	0.75
NZ_CP024956_7	7.24\|4067251\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067251-4067282	32	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	146946-146977	8	0.75
NZ_CP024956_7	7.26\|4067371\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067371-4067402	32	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	146946-146977	8	0.75
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NC_015314	Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence	170481-170512	8	0.75
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1897513-1897544	8	0.75
NZ_CP024956_7	7.29\|4067551\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067551-4067582	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1955008-1955039	8	0.75
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NC_013697	Deftia phage phiW-14, complete genome	120702-120733	8	0.75
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	464751-464782	8	0.75
NZ_CP024956_8	8.2\|4078160\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078160-4078191	32	LR721753	Aliivibrio wodanis 06/09/160 plasmid 2 complete sequence	19629-19660	8	0.75
NZ_CP024956_8	8.8\|4078520\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078520-4078551	32	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	24156-24187	8	0.75
NZ_CP024956_7	7.1\|4065870\|33\|NZ_CP024956\|CRISPRCasFinder,CRT	4065870-4065902	33	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	188532-188564	9	0.727
NZ_CP024956_7	7.1\|4065870\|33\|NZ_CP024956\|CRISPRCasFinder,CRT	4065870-4065902	33	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	151316-151348	9	0.727
NZ_CP024956_7	7.5\|4066111\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066111-4066142	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	943451-943482	9	0.719
NZ_CP024956_7	7.9\|4066351\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066351-4066382	32	LC553734	Escherichia phage EK010 DNA, complete sequence	23285-23316	9	0.719
NZ_CP024956_7	7.10\|4066411\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066411-4066442	32	MN850624	Escherichia phage usur, complete genome	19832-19863	9	0.719
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	2174896-2174927	9	0.719
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	2247594-2247625	9	0.719
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1499090-1499121	9	0.719
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	MT663720	Pseudomonas phage DDSR119, complete genome	20166-20197	9	0.719
NZ_CP024956_7	7.29\|4067551\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067551-4067582	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1888607-1888638	9	0.719
NZ_CP024956_7	7.30\|4067611\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067611-4067642	32	NZ_CP038615	Arsenophonus nasoniae strain FIN plasmid pArsFIN3, complete sequence	59284-59315	9	0.719
NZ_CP024956_7	7.30\|4067611\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067611-4067642	32	NZ_CP038616	Arsenophonus nasoniae strain FIN plasmid pArsFIN4, complete sequence	56664-56695	9	0.719
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_CP034472	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence	129949-129980	9	0.719
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_CP034477	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence	51082-51113	9	0.719
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NC_014563	Pantoea vagans C9-1 plasmid pPag2, complete sequence	45016-45047	9	0.719
NZ_CP024956_7	7.1\|4065870\|33\|NZ_CP024956\|CRISPRCasFinder,CRT	4065870-4065902	33	NZ_CP006371	Aureimonas sp. AU20 plasmid pAU20d, complete sequence	49261-49293	10	0.697
NZ_CP024956_7	7.16\|4066771\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066771-4066802	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	892854-892885	10	0.688
NZ_CP024956_7	7.19\|4066951\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4066951-4066982	32	MT601270	Bacillus phage vB_BsuM-Goe9, complete genome	121729-121760	10	0.688
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	473564-473595	10	0.688
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	663774-663805	10	0.688
NZ_CP024956_7	7.28\|4067491\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067491-4067522	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1696533-1696564	10	0.688
NZ_CP024956_7	7.29\|4067551\|32\|NZ_CP024956\|CRISPRCasFinder,CRT,PILER-CR	4067551-4067582	32	HQ634195	Vibrio phage eugene 12A10 genomic sequence	1234-1265	10	0.688
NZ_CP024956_8	8.1\|4078100\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078100-4078131	32	NZ_CP030177	Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence	125933-125964	10	0.688
NZ_CP024956_8	8.8\|4078520\|32\|NZ_CP024956\|CRISPRCasFinder,CRT	4078520-4078551	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	197335-197366	10	0.688

1. spacer 7.9|4066351|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to KC170283 (Uncultured bacterium plasmid pDS1, complete sequence) position: , mismatch: 1, identity: 0.969

acgcttgatattgcttatggcgtgttagttca	CRISPR spacer
acgcttgatattgcttatggcgtattagttca	Protospacer
***********************.********

2. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP034939 (Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence) position: , mismatch: 2, identity: 0.938

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
tggctgaatgaggccgtggaggccgcggcgac	Protospacer
***********************.***** **

3. spacer 7.16|4066771|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MN187550 (Escherichia phage phiv142-3, complete genome) position: , mismatch: 5, identity: 0.844

gcgttaggctcgtcggtgtagatcaactttcc	CRISPR spacer
gcctgcggctggtctgtgtagatcaactttcc	Protospacer
** *  **** *** *****************

4. spacer 7.16|4066771|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to JQ011317 (Escherichia phage TL-2011b, complete genome) position: , mismatch: 5, identity: 0.844

gcgttaggctcgtcggtgtagatcaactttcc	CRISPR spacer
gcctgcggctggtctgtgtagatcaactttcc	Protospacer
** *  **** *** *****************

5. spacer 7.16|4066771|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to KM389361 (UNVERIFIED: Escherichia phage Phi05_1387 B clone contig00002 genomic sequence) position: , mismatch: 5, identity: 0.844

gcgttaggctcgtcggtgtagatcaactttcc	CRISPR spacer
gcctgcggctggtctgtgtagatcaactttcc	Protospacer
** *  **** *** *****************

6. spacer 8.4|4078280|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MH338238 (Mycobacterium phage Michley, complete genome) position: , mismatch: 6, identity: 0.812

acctggaagacgcactacgcctgaatccgctg-	CRISPR spacer
tcctggaagaggcacaacgcctg-atccacgga	Protospacer
 ********* **** ******* ****.* *

7. spacer 7.20|4067011|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031083 (Paracoccus yeei strain CCUG 32053 plasmid pYEE5, complete sequence) position: , mismatch: 7, identity: 0.781

agcttgcgttgctcgtctgtcaaattgcgggt	CRISPR spacer
tgcttgcgctgctcgtctgtcatattgaagta	Protospacer
 *******.************* **** .*

8. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
gcgctgaacgcggccgtggaggctgcgcgtgc	Protospacer
  ******.* ****************  *.*

9. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP031409 (Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence) position: , mismatch: 7, identity: 0.781

--tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
gatggt--aatgaggctgaggaggctgcggcgaa	Protospacer
  ***.  ********.* ************ *

10. spacer 8.4|4078280|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MK494116 (Mycobacterium phage Dulcie, complete genome) position: , mismatch: 7, identity: 0.781

acctggaagacgcactacgcctgaatccgctg-	CRISPR spacer
tcctggaagaggcacaacgcctg-atccatgga	Protospacer
 ********* **** ******* ****.. *

11. spacer 8.5|4078340|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to AJ564013 (Bacteriophage PY54 complete genome) position: , mismatch: 7, identity: 0.781

ttgctttaacaaccaccgtctgaactcactgt	CRISPR spacer
ttgagaaatcagccaccgtctaaactcactgt	Protospacer
***    * **.*********.**********

12. spacer 8.5|4078340|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NC_005069 (Yersinia phage PY54, complete genome) position: , mismatch: 7, identity: 0.781

ttgctttaacaaccaccgtctgaactcactgt	CRISPR spacer
ttgagaaatcagccaccgtctaaactcactgt	Protospacer
***    * **.*********.**********

13. spacer 7.10|4066411|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MN850583 (Escherichia phage glasur, complete genome) position: , mismatch: 8, identity: 0.75

gatcggcaaagataatcaggcactcatcaccg	CRISPR spacer
aatgtccaaggttaatcaggcactcatcacta	Protospacer
.**   ***.* ******************..

14. spacer 7.22|4067131|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 8, identity: 0.75

aaccgtcgctcgctggccactgtacgattcgc	CRISPR spacer
cagcgagcttcgctcgcctctgtacgattcgc	Protospacer
 * **   .***** *** *************

15. spacer 7.24|4067251|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 8, identity: 0.75

aaccgtcgctcgctggccactgtacgattcgc	CRISPR spacer
cagcgagcttcgctcgcctctgtacgattcgc	Protospacer
 * **   .***** *** *************

16. spacer 7.26|4067371|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 8, identity: 0.75

aaccgtcgctcgctggccactgtacgattcgc	CRISPR spacer
cagcgagcttcgctcgcctctgtacgattcgc	Protospacer
 * **   .***** *** *************

17. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NC_015314 (Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete sequence) position: , mismatch: 8, identity: 0.75

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
cttgacggccaggccgacgccgatcgccagca	Protospacer
*.******* * *************    .**

18. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

cctgacggcaacgccgacgccgat---ccgacaca	CRISPR spacer
cgtgacggcgtcgccgacgccgatcgcctggc---	Protospacer
* *******. *************   *.*.*

19. spacer 7.29|4067551|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.75

gcatccgtccagaccgtatcgat----agtctctgc	CRISPR spacer
gcatccgtccagaacatatcgatgtgcggcct----	Protospacer
************* *.*******    .*.**

20. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NC_013697 (Deftia phage phiW-14, complete genome) position: , mismatch: 8, identity: 0.75

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
tggctgaaggaggccctggaggcttactcgat	Protospacer
******** ****** ********    * *.

21. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

-tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
acggtcgcg-gaggccgtggaggcggcggccac	Protospacer
 .**..* . ************** *****.**

22. spacer 8.2|4078160|32|NZ_CP024956|CRISPRCasFinder,CRT matches to LR721753 (Aliivibrio wodanis 06/09/160 plasmid 2 complete sequence) position: , mismatch: 8, identity: 0.75

cagtcgctaccaagcgcattaagtgcagggac	CRISPR spacer
ccgtcgctacccagcgccttaagtgtggacag	Protospacer
* ********* ***** *******..*. *

23. spacer 8.8|4078520|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 8, identity: 0.75

atcgcagtgatgaagatccccgcagcctcccc	CRISPR spacer
ggcgcagagatgcagatccccgcagccaggac	Protospacer
. ***** **** **************    *

24. spacer 7.1|4065870|33|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 9, identity: 0.727

gggttgcctcggcctgaacagcgatctcgcgtg	CRISPR spacer
tctccgcctcggcctgaaccgcgttctcgcagg	Protospacer
   ..************** *** ******. *

25. spacer 7.1|4065870|33|NZ_CP024956|CRISPRCasFinder,CRT matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 9, identity: 0.727

gggttgcctcggcctgaacagcgatctcgcgtg	CRISPR spacer
tgtccgccacggcctgaaccgcgatctcggctt	Protospacer
 * ..*** ********** *********  *

26. spacer 7.5|4066111|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgtcgagcgctgattcgtcggtcactggatac	CRISPR spacer
catcgagcgctggttcgtcggtcacgcggcgg	Protospacer
..**********.************  *...

27. spacer 7.9|4066351|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to LC553734 (Escherichia phage EK010 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

acgcttgatattgcttatggcgtgttagttca	CRISPR spacer
attcacgatctttcttatggcgtgttagtgtc	Protospacer
*. * .*** ** **************** .

28. spacer 7.10|4066411|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MN850624 (Escherichia phage usur, complete genome) position: , mismatch: 9, identity: 0.719

gatcggcaaagataatcaggcactcatcaccg	CRISPR spacer
aatgtctaaggttaatcaggcactcatcacta	Protospacer
.**   .**.* ******************..

29. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.719

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
atggacggcaccgccgacgccgatcctcgagc	Protospacer
 . ******* ***************   *

30. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.719

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
atggacggcaccgccgacgccgatcctcgagc	Protospacer
 . ******* ***************   *

31. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 9, identity: 0.719

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
atggacggcaccgccgacgccgatcctcgagc	Protospacer
 . ******* ***************   *

32. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MT663720 (Pseudomonas phage DDSR119, complete genome) position: , mismatch: 9, identity: 0.719

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
cagaacggcaacgccgacgctgttccggctgc	Protospacer
*  .****************.* ****.*

33. spacer 7.29|4067551|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 9, identity: 0.719

gcatccgtccagaccgtatcgatagtctctgc	CRISPR spacer
gcatccgtccagaacatatcgatgtgcggccc	Protospacer
************* *.*******.  *  . *

34. spacer 7.30|4067611|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038615 (Arsenophonus nasoniae strain FIN plasmid pArsFIN3, complete sequence) position: , mismatch: 9, identity: 0.719

ccctgactggctggcaatctcctgtgtcgcca	CRISPR spacer
tagtgactggctggcaatccactgtggtttca	Protospacer
.  ****************. ***** . .**

35. spacer 7.30|4067611|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038616 (Arsenophonus nasoniae strain FIN plasmid pArsFIN4, complete sequence) position: , mismatch: 9, identity: 0.719

ccctgactggctggcaatctcctgtgtcgcca	CRISPR spacer
tagtgactggctggcaatccactgtggtttca	Protospacer
.  ****************. ***** . .**

36. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP034472 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence) position: , mismatch: 9, identity: 0.719

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
gcgctgaatgcggccgttgaggctgcccgcgc	Protospacer
  ******** ****** ********   ..*

37. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP034477 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence) position: , mismatch: 9, identity: 0.719

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
gcgctgaatgcggccgttgaggctgcccgcgc	Protospacer
  ******** ****** ********   ..*

38. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NC_014563 (Pantoea vagans C9-1 plasmid pPag2, complete sequence) position: , mismatch: 9, identity: 0.719

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
gcgctgaatgcggccgttgaggctgcccgcgc	Protospacer
  ******** ****** ********   ..*

39. spacer 7.1|4065870|33|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP006371 (Aureimonas sp. AU20 plasmid pAU20d, complete sequence) position: , mismatch: 10, identity: 0.697

gggttgcctcggcctgaacagcgatctcgcgtg	CRISPR spacer
cctgcgccgcggcctgaacggcgatctcggttt	Protospacer
    .*** **********.*********  *

40. spacer 7.16|4066771|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgttaggctcgtcggtgtagatcaactttcc	CRISPR spacer
tcgttaggatcgtcggtgtagatccggcgcag	Protospacer
 ******* *************** . . .

41. spacer 7.19|4066951|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to MT601270 (Bacillus phage vB_BsuM-Goe9, complete genome) position: , mismatch: 10, identity: 0.688

ctgtcgcagtatttgacccacgacgtgatgct	CRISPR spacer
gaagctcagtatttgacccatgacttgattga	Protospacer
  . * **************.*** ****

42. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
gactgcggcaacgcctacgacgatccgacgac	Protospacer
  . .********** *** *********.

43. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 10, identity: 0.688

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
gtcgaccgcaacgccgccgccgatccgggggc	Protospacer
 ..*** ********* **********. .

44. spacer 7.28|4067491|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 10, identity: 0.688

cctgacggcaacgccgacgccgatccgacaca	CRISPR spacer
atggacggcaccgccgaccccgatcctcgagc	Protospacer
 . ******* ******* *******   *

45. spacer 7.29|4067551|32|NZ_CP024956|CRISPRCasFinder,CRT,PILER-CR matches to HQ634195 (Vibrio phage eugene 12A10 genomic sequence) position: , mismatch: 10, identity: 0.688

gcatccgtccagaccgtatcgatagtctctgc	CRISPR spacer
aagaagtcccaaacagtatcgatagtctctgc	Protospacer
. .    .***.** *****************

46. spacer 8.1|4078100|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_CP030177 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence) position: , mismatch: 10, identity: 0.688

tggctgaatgaggccgtggaggctgcggctac	CRISPR spacer
gcagagaatgaggccctgcaggctgcggaaaa	Protospacer
  .  ********** ** *********  *

47. spacer 8.8|4078520|32|NZ_CP024956|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

atcgcagtgatgaagatccccgcagcctcccc	CRISPR spacer
atcgcggtgatgaagatcgccgcggtgctgtt	Protospacer
*****.************ ****.*. .. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

920182 : 928939

Enterobacteria_phage(50.0%)

integrase

attL 918424:918437|attR 931305:931318

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
918424:918437	attL	NA	NA	NA	NA
WP_039290139.1\|920182_922510_-	DNA primase	Q7M2A8	Enterobacteria_phage	6.2e-269	60.8
WP_039290142.1\|922520_922862_-	DUF5375 family protein	NA	NA	NA	NA
WP_039290145.1\|922858_923125_-	hypothetical protein	NA	NA	NA	NA
WP_039294697.1\|923121_923316_-	hypothetical protein	NA	NA	NA	NA
WP_039294701.1\|923308_923506_-	host cell division inhibitor Icd-like protein	A0A1W6JPK3	Morganella_phage	7.5e-11	59.6
WP_039281995.1\|923861_924086_-	hypothetical protein	NA	NA	NA	NA
WP_039290147.1\|924082_924343_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	1.3e-13	57.4
WP_039290148.1\|924889_925651_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-28	36.6
WP_071598516.1\|925647_925896_+	hypothetical protein	A0A2I8TV89	Erwinia_phage	1.2e-13	60.3
WP_039297459.1\|926289_927678_+	hypothetical protein	NA	NA	NA	NA
WP_039297461.1\|927751_928939_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	3.0e-102	48.0
931305:931318	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1645534 : 1653438

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039290885.1\|1645534_1646944_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.2e-51	30.3
WP_039290887.1\|1646956_1648327_+	phosphomannomutase CpsG	A0A127AWJ1	Bacillus_phage	7.1e-31	27.0
WP_039290889.1\|1648402_1649254_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.0e-44	39.1
WP_011093025.1\|1649250_1649787_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.4e-61	62.0
WP_039290891.1\|1649788_1650658_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.2e-109	66.3
WP_011093027.1\|1650904_1651801_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	6.0e-47	39.6
WP_011093028.1\|1652031_1653438_+	NADP-dependent phosphogluconate dehydrogenase	A0A1D7RI04	Synechococcus_phage	8.6e-32	29.9

DBSCAN-SWA_3

2009968 : 2021562

Burkholderia_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011094318.1\|2009968_2011696_+	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	6.6e-26	33.6
WP_011094317.1\|2011724_2013053_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_011094316.1\|2013055_2014402_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_011094315.1\|2014512_2014842_+	membrane protein	A4JWP3	Burkholderia_virus	1.0e-23	56.5
WP_011094314.1\|2014843_2015455_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	9.4e-60	59.2
WP_011094313.1\|2015444_2016119_+	hypothetical protein	NA	NA	NA	NA
WP_011094312.1\|2016108_2016438_+	hypothetical protein	Q5ZQY8	Pseudomonas_phage	1.5e-19	45.8
WP_011094311.1\|2016430_2016742_+	hypothetical protein	NA	NA	NA	NA
WP_039291217.1\|2017003_2017471_+	hypothetical protein	NA	NA	NA	NA
WP_011094309.1\|2017467_2017665_+	hypothetical protein	Q6QIB1	Burkholderia_phage	1.9e-09	58.5
WP_071598448.1\|2017654_2017867_+	hypothetical protein	A4JWK5	Burkholderia_virus	1.4e-10	89.5
WP_100675225.1\|2017876_2018845_+	DNA-binding protein YbiB	NA	NA	NA	NA
WP_011094306.1\|2018931_2020800_+	peptidase M3	NA	NA	NA	NA
WP_011094305.1\|2020839_2021562_-	glutamine ABC transporter ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	3.9e-36	42.7

DBSCAN-SWA_4

2356487 : 2365985

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011093974.1\|2356487_2358416_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.0e-127	36.2
WP_011093973.1\|2358418_2358961_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.8e-15	33.5
WP_005968897.1\|2359056_2359254_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_005968887.1\|2359297_2359654_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_106120997.1\|2359758_2359803_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_011093972.1\|2359966_2360950_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	4.5e-35	39.3
WP_039291606.1\|2360964_2363352_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	6.0e-09	29.9
WP_009112984.1\|2363356_2363653_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.1e-13	40.0
WP_039291608.1\|2363694_2364129_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA
WP_039291611.1\|2364266_2365985_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.2e-57	30.8

DBSCAN-SWA_5

3419533 : 3452919

Pseudomonas_phage(30.0%)

head,terminase,tail,integrase,transposase,plate

attL 3419075:3419089|attR 3448335:3448349

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3419075:3419089	attL	NA	NA	NA	NA
WP_039291931.1\|3419533_3420181_-	hypothetical protein	A0A0M4UKA3	Ralstonia_phage	8.3e-14	34.9
WP_039291934.1\|3420196_3420595_-	hypothetical protein	A0A0C4UQZ2	Shigella_phage	2.8e-12	55.0
WP_039291937.1\|3420814_3421027_+	transcriptional regulator	A0A0C4UQU0	Shigella_phage	1.5e-20	72.5
WP_039291940.1\|3421028_3423062_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0M3LPN5	Mannheimia_phage	1.4e-168	47.3
WP_039291942.1\|3423078_3423972_+	AAA family ATPase	A0A2D1GNS0	Pseudomonas_phage	1.3e-102	62.2
WP_039295049.1\|3423989_3424223_+	hypothetical protein	A0A2D1GNI5	Pseudomonas_phage	2.2e-17	52.6
WP_039291946.1\|3424226_3424430_+	hypothetical protein	NA	NA	NA	NA
WP_039291948.1\|3424419_3425058_+	DUF3164 family protein	Q6QIE4	Burkholderia_phage	5.2e-69	65.0
WP_100675296.1\|3425330_3426047_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	2.0e-29	38.4
WP_039291957.1\|3426048_3426264_+	hypothetical protein	NA	NA	NA	NA
WP_051918066.1\|3426260_3426710_+	hypothetical protein	NA	NA	NA	NA
WP_039291960.1\|3426706_3427030_+	hypothetical protein	NA	NA	NA	NA
WP_039291963.1\|3427026_3427416_+	hypothetical protein	NA	NA	NA	NA
WP_039291966.1\|3427412_3427829_+	regulatory protein GemA	A0A2D1GNN4	Pseudomonas_phage	1.6e-34	54.5
WP_039291969.1\|3427831_3428266_+	hypothetical protein	A0A2D1GNW5	Pseudomonas_phage	2.2e-26	46.2
WP_051918067.1\|3428286_3428811_+	hypothetical protein	NA	NA	NA	NA
WP_048018336.1\|3428886_3429240_+	membrane protein	Q6QIC8	Burkholderia_phage	3.6e-19	52.7
WP_039291972.1\|3429242_3429881_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.5e-60	54.9
WP_051918068.1\|3429864_3430473_+	hypothetical protein	NA	NA	NA	NA
WP_039291974.1\|3430469_3430712_+	hypothetical protein	NA	NA	NA	NA
WP_051918069.1\|3430711_3431002_+	hypothetical protein	NA	NA	NA	NA
WP_039291977.1\|3431001_3431502_+	DUF1804 family protein	I6PBD1	Pseudomonas_phage	3.0e-48	56.6
WP_039291980.1\|3431494_3431698_+	hypothetical protein	NA	NA	NA	NA
WP_039291983.1\|3431698_3433357_+\|terminase	phage terminase large subunit	A0A0A1IW02	Pseudomonas_phage	2.4e-214	65.6
WP_039291986.1\|3433360_3434929_+	DUF935 domain-containing protein	A0A0M5MS00	Ralstonia_phage	1.4e-128	47.9
WP_039291988.1\|3434915_3436256_+	hypothetical protein	A0A0A7DJT5	Pseudomonas_phage	1.8e-55	35.4
WP_039291990.1\|3436380_3436923_+	phage virion morphogenesis protein	A0A2H4J9E5	uncultured_Caudovirales_phage	8.7e-25	38.6
WP_039291993.1\|3437157_3438297_+	hypothetical protein	A0A0M5N0Q6	Ralstonia_phage	6.3e-57	41.7
WP_039291996.1\|3438289_3438685_+	hypothetical protein	J9RWG0	Pseudomonas_phage	2.0e-23	47.7
WP_039291999.1\|3438696_3439614_+\|head	head protein	A0A2H4J778	uncultured_Caudovirales_phage	1.7e-97	58.6
WP_051918070.1\|3439613_3440048_+	hypothetical protein	NA	NA	NA	NA
WP_039292002.1\|3440047_3440479_+	DUF1320 domain-containing protein	A0A1X9SGZ3	Bradyrhizobium_phage	6.5e-15	33.1
WP_039292005.1\|3440475_3441138_+	DUF1834 family protein	NA	NA	NA	NA
WP_080718614.1\|3441118_3441331_+	hypothetical protein	NA	NA	NA	NA
WP_039292011.1\|3441317_3442739_+\|tail	tail sheath protein	B7SDP8	Haemophilus_phage	1.9e-95	45.0
WP_039292014.1\|3442757_3443135_+	hypothetical protein	A0A0M3LRV6	Mannheimia_phage	2.2e-27	52.9
WP_039295069.1\|3443140_3443521_+	hypothetical protein	NA	NA	NA	NA
WP_039292017.1\|3443670_3445860_+\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	2.0e-67	36.9
WP_039292020.1\|3445859_3447251_+	multidrug DMT transporter permease	F6MIL2	Haemophilus_phage	1.1e-36	28.0
WP_039292024.1\|3447234_3448422_+\|tail	tail protein	A0A0M3LPS4	Mannheimia_phage	1.6e-71	39.5
3448335:3448349	attR	NA	NA	NA	NA
WP_039292026.1\|3448411_3449062_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	1.0e-35	39.5
WP_039292029.1\|3449119_3449470_+	phage GP46 family protein	A0A2H4JDR8	uncultured_Caudovirales_phage	3.2e-28	61.7
WP_039292032.1\|3449469_3450531_+\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	4.6e-78	45.6
WP_039292035.1\|3450527_3451100_+	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_039292037.1\|3452277_3452919_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	4.6e-33	40.7

DBSCAN-SWA_6

3693563 : 3698976

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011094848.1\|3693563_3693803_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	4.5e-18	58.1
WP_011094849.1\|3693812_3694220_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A220BYR7	Staphylococcus_phage	2.3e-06	26.5
WP_043878085.1\|3694198_3696364_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	5.9e-205	50.3
WP_011094851.1\|3696388_3697351_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.3e-137	72.9
WP_011094852.1\|3697718_3698456_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.9e-38	38.0
WP_011094853.1\|3698511_3698976_+	ribonuclease HI	J9Q745	Salmonella_phage	6.3e-48	56.7

DBSCAN-SWA_7

4435991 : 4444667

Dickeya_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011095541.1\|4435991_4437116_+	polysaccharide lyase	A0A140XB77	Dickeya_phage	1.3e-54	71.7
WP_011095542.1\|4437783_4438908_+	polysaccharide lyase	A0A140XB77	Dickeya_phage	2.3e-56	72.5
WP_011095543.1\|4439493_4440618_+	polysaccharide lyase	A0A140XB77	Dickeya_phage	3.9e-59	77.5
WP_039294001.1\|4440786_4442064_+	pectate lyase	A0A1B1IPS8	uncultured_Mediterranean_phage	7.6e-35	34.7
WP_011095545.1\|4442149_4442719_-	peptidylprolyl isomerase A	A0A1B1IVS0	uncultured_Mediterranean_phage	5.2e-12	36.5
WP_039294003.1\|4443021_4443831_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-29	38.9
WP_039294005.1\|4443842_4444667_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-13	30.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024956

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection