CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP024703	Fusobacterium pseudoperiodonticum strain KCOM 2305 chromosome, complete genome	5 crisprs	cas14j,DinG,WYL,cas3,cas4,csa3,DEDDh,cas14k,PD-DExK,c2c9_V-U4,RT,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csm6,cas1,cas2	1	5	1	0

1. NZ_CP024703

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024703_1

• CRISPR_ID: NZ_CP024703_1
• CRISPR_location: 271115-271203
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP024703_1

Consensus_repeat	Method
ATTATTATTAATTGGATATAGTAAAT	CRISPRCasFinder

spacers of NZ_CP024703_1

>1.1|271141|37|NZ_CP024703|CRISPRCasFinder
GCCTAAATGAATGATAAACTTTCTTATATCTCCTTAT

CRISPR arrays and Neighbor proteins around NZ_CP024703_1

CRISPR arrays

The CRISPR arrays of NZ_CP024703_1

>merge|NZ_CP024703|1|271115-271203|CRISPRCasFinder
ATTATTATTAATTGGATATAGTAAATGCCTAAATGAATGATAAACTTTCTTATATCTCCTTATATTATTATTAATTGGATATAGTAAAT

>NZ_CP024703|1|1|271115-271203|CRISPRCasFinder
ATTATTATTAATTGGATATAGTAAAT	GCCTAAATGAATGATAAACTTTCTTATATCTCCTTAT
ATTATTATTAATTGGATATAGTAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024703.1|WP_099986066.1|280215_280419_+|hypothetical-protein	unknown	unknown	gnl|CDD|377558
NZ_CP024703.1|WP_099993815.1|267821_268625_-|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl|CDD|197338
NZ_CP024703.1|WP_005967800.1|269626_270049_+|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224870
NZ_CP024703.1|WP_099992041.1|267198_267822_-|thiamine-diphosphokinase	unknown	unknown	gnl|CDD|153431
NZ_CP024703.1|WP_099959108.1|283099_283786_+|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl|CDD|184516
NZ_CP024703.1|WP_005967793.1|266750_267134_-|thioesterase-family-protein	unknown	unknown	gnl|CDD|227783
NZ_CP024703.1|WP_099986065.1|280477_281329_-|DUF2262-domain-containing-protein	unknown	unknown	gnl|CDD|378356
NZ_CP024703.1|WP_099959125.1|266576_266750_+|riboflavin-synthase-subunit-alpha	unknown	unknown	unknown
NZ_CP024703.1|WP_099989075.1|265263_266487_-|uracil-xanthine-permease	unknown	unknown	gnl|CDD|225142
NZ_CP024703.1|WP_099992047.1|270089_270806_-|NAD-dependent-protein-deacylase	unknown	unknown	gnl|CDD|234777
NZ_CP024703.1|WP_099993817.1|272395_273895_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|183088
NZ_CP024703.1|WP_099992062.1|281480_282236_-|DUF4241-domain-containing-protein	unknown	unknown	gnl|CDD|379427
NZ_CP024703.1|WP_099992059.1|277819_279379_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223730
NZ_CP024703.1|WP_099992053.1|275020_275884_+|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl|CDD|211339
NZ_CP024703.1|WP_099992044.1|268867_269599_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|319796
NZ_CP024703.1|WP_099987681.1|279435_279942_-|DUF5105-domain-containing-protein	unknown	unknown	unknown
NZ_CP024703.1|WP_099992056.1|275907_277728_+|translational-GTPase-TypA	unknown	unknown	gnl|CDD|224138
NZ_CP024703.1|WP_099992065.1|282248_282971_-|Fic-family-protein	unknown	unknown	gnl|CDD|376885
NZ_CP024703.1|WP_099972020.1|264771_265251_-|S-ribosylhomocysteine-lyase	unknown	unknown	gnl|CDD|376888
NZ_CP024703.1|WP_099972021.1|263231_264743_-|diguanylate-phosphodiesterase	unknown	unknown	gnl|CDD|173864

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP024703.1|WP_099986066.1|280215_280419_+|hypothetical-protein	gnl|CDD|377558	pfam05818, TraT, Enterobacterial TraT complement resistance protein. The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between an Escherichia coli and its surroundings.	0.001154
NZ_CP024703.1|WP_099993815.1|267821_268625_-|endonuclease/exonuclease/phosphatase-family-protein	gnl|CDD|197338	cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like. This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	6.55652e-51
NZ_CP024703.1|WP_005967800.1|269626_270049_+|Rrf2-family-transcriptional-regulator	gnl|CDD|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	3.10984e-40
NZ_CP024703.1|WP_099992041.1|267198_267822_-|thiamine-diphosphokinase	gnl|CDD|153431	cd07995, TPK, Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.	2.37779e-57
NZ_CP024703.1|WP_099959108.1|283099_283786_+|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl|CDD|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	1.2698e-157
NZ_CP024703.1|WP_005967793.1|266750_267134_-|thioesterase-family-protein	gnl|CDD|227783	COG5496, COG5496, Predicted thioesterase [General function prediction only].	2.10099e-41
NZ_CP024703.1|WP_099986065.1|280477_281329_-|DUF2262-domain-containing-protein	gnl|CDD|378356	pfam10020, DUF2262, Uncharacterized protein conserved in bacteria (DUF2262). This domain, found in various hypothetical bacterial proteins, has no known function.	1.48789e-19
NZ_CP024703.1|WP_099989075.1|265263_266487_-|uracil-xanthine-permease	gnl|CDD|225142	COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism].	5.72186e-118
NZ_CP024703.1|WP_099992047.1|270089_270806_-|NAD-dependent-protein-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	3.76813e-112
NZ_CP024703.1|WP_099993817.1|272395_273895_-|AAA-family-ATPase	gnl|CDD|183088	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.	4.10387e-40
NZ_CP024703.1|WP_099992062.1|281480_282236_-|DUF4241-domain-containing-protein	gnl|CDD|379427	pfam14025, DUF4241, Protein of unknown function (DUF4241). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 205 and 315 amino acids in length. There is a conserved GDG sequence motif at the C-terminus.	5.05382e-72
NZ_CP024703.1|WP_099992059.1|277819_279379_+|alpha/beta-hydrolase	gnl|CDD|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	4.12955e-07
NZ_CP024703.1|WP_099992053.1|275020_275884_+|tRNA-pseudouridine(55)-synthase-TruB	gnl|CDD|211339	cd02573, PseudoU_synth_EcTruB, Pseudouridine synthase, Escherichia coli TruB like. This group consists of bacterial pseudouridine synthases similar to E. coli TruB and Mycobacterium tuberculosis TruB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). E. coli TruB and M. tuberculosis TruB make psi55 in the T loop of tRNAs. Psi55 is nearly universally conserved. E. coli TruB is not inhibited by RNA containing 5-fluorouridine.	3.53412e-110
NZ_CP024703.1|WP_099992044.1|268867_269599_+|HAD-family-hydrolase	gnl|CDD|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	8.90049e-54
NZ_CP024703.1|WP_099992056.1|275907_277728_+|translational-GTPase-TypA	gnl|CDD|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_CP024703.1|WP_099992065.1|282248_282971_-|Fic-family-protein	gnl|CDD|376885	pfam02661, Fic, Fic/DOC family. This family consists of the Fic (filamentation induced by cAMP) protein and doc (death on curing). The Fic protein is involved in cell division and is suggested to be involved in the synthesis of PAB or folate, indicating that the Fic protein and cAMP are involved in a regulatory mechanism of cell division via folate metabolism. This family contains a central conserved motif HPFXXGNG in most members. The exact molecular function of these proteins is uncertain. P1 lysogens of Escherichia coli carry the prophage as a stable low copy number plasmid. The frequency with which viable cells cured of prophage are produced is about 10(-5) per cell per generation. A significant part of this remarkable stability can be attributed to a plasmid-encoded mechanism that causes death of cells that have lost P1. In other words, the lysogenic cells appear to be addicted to the presence of the prophage. The plasmid withdrawal response depends on a gene named doc (death on curing) that is represented by this family. Doc induces a reversible growth arrest of E. coli cells by targetting the protein synthesis machinery. Doc hosts the C-terminal domain of its antitoxin partner Phd (prevents host death) through fold complementation, a domain that is intrinsically disordered in solution but that folds into an alpha-helix on binding to Doc.This domain forms complexes with Phd antitoxins containing pfam02604.	2.10176e-18
NZ_CP024703.1|WP_099972020.1|264771_265251_-|S-ribosylhomocysteine-lyase	gnl|CDD|376888	pfam02664, LuxS, S-Ribosylhomocysteinase (LuxS). This family consists of the LuxS protein involved in autoinducer AI2 synthesis and its hypothetical relatives. S-ribosylhomocysteinase (LuxS) catalyzes the cleavage of the thioether bond in S-ribosylhomocysteine (SRH) to produce homocysteine and 4,5-dihydroxy-2,3-pentanedione (DPD), the precursor of type II bacterial quorum sensing molecule.	4.54805e-83
NZ_CP024703.1|WP_099972021.1|263231_264743_-|diguanylate-phosphodiesterase	gnl|CDD|173864	cd08499, PBP2_Ylib_like, The substrate-binding component of an uncharacterized ABC-type peptide import system Ylib contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding component of an uncharacterized ATP-binding cassette (ABC)-type peptide transport system YliB. Although the ligand specificity of Ylib protein is not known, it shares significant sequence similarity to the ABC-type dipeptide and oligopeptide binding proteins. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.60187e-152

Protein sequences

>NZ_CP024703.1|WP_099992047.1|270089_270806_-|NAD-dependent-protein-deacylase
MENKIEKLADIVKNSKHLVFFTGAGVSTESGLKSFRGKDGLYSSLYKGKYRPEEVLSSDFFCSHRKIFIEYVEEELNINGIKPNKGHLALAELERMGILKAVITQNIDDLHQMAGNKNVLELHGSLKRWYCLSCGKTSNKNFSCDCGGIVRPDVTLYGENLNQDVVNEAIYQIEQADTLIVAGTSLTVYPAAYYLRYFRGKNLVIINNESTQYDGEASLVLKTNFADTMEKVLNIIKK
>NZ_CP024703.1|WP_005967800.1|269626_270049_+|Rrf2-family-transcriptional-regulator
MKIKNEVRYALQIVYYLTLHRDKDIISSNEISAEENIPRLFCLRIIKKLEKAGVVKIFRGAKGGYVLTRDPKRLTFRDIIEIIDDDIVLQPCIDSSTICSTRGANCSIRLALKKIQDELLDDFDKINFHDLVEENTGLYV
>NZ_CP024703.1|WP_099992044.1|268867_269599_+|HAD-family-hydrolase
MIAAFFDIDGTIYRNALLIEHFKKMIKYELFKDIQYRLKVEEAYQLWDTRKGDYDDYLLDLAQLYVVAIKGLPLKYNDFISDQVLLLKGNRVYTYTREMIEWHKKEGHKVFFISGSPSFLVSRMAKKMGVDDFCGSVYEIDEETQTFSGKITKPMWDSVHKQEAIEDFIKKYDIDLSKSYAYGDTNGDYSMLSSVGNPRAINPSKELIQKIKNDEDLKSKIQIIIERKNVIYKLDSNVELIEF
>NZ_CP024703.1|WP_099993815.1|267821_268625_-|endonuclease/exonuclease/phosphatase-family-protein
MIFTMFSTISSADEAYIASFNILRLGAAEKDMVQTAKLLQGFDLVGLVEVINKKGIEELVDELNRQSPNTWEYHISPFGVGSSKYKEYFGYVYKKDKVKFIKSEGFYKDGKSSLLREPYGATFKIGNFDFTLVLVHTIYGNNESQRKAENFKMVDVYDYFQDKDKKENDVLIAGDFNLYALDESFRPMYKHRDKITYAIDPAIKTTIGTKGRANSYDNFFFSQKYTTEFTGSSGALDFSEKDPQLMRQIISDHIPVFIVVETSKDDD
>NZ_CP024703.1|WP_099992041.1|267198_267822_-|thiamine-diphosphokinase
MKIAYLFFNGQLRGSKKFYSNLIKKQGGDIYCADGGANIAYQLNLIPKEIYGDLDSIKDEVKDFYTKKNVKFIKFNVEKDYTDSELVLNEIEKKYDKIYAIAALGGSIDHELTNINLLNRYSNLIFVSQKEKIFKIEKSYDFSNMKNKKVSFIIFSDKVENLTLKGFKYSVENLDLTKGETRCVSNIIEKNEARVTLKNGALLCVVK
>NZ_CP024703.1|WP_005967793.1|266750_267134_-|thioesterase-family-protein
MLEVGMKYEIDRVVTENDTAAKAASGSVEVLATPVMIAWMEEASLRLAQKELEEGLTTVGTEVNIKHLKGTLVGKTVKVLSTLKEIDRKRLVFDVEVIEDGVAVGTGSHTRFIIDTAKFYEKLKNTK
>NZ_CP024703.1|WP_099959125.1|266576_266750_+|riboflavin-synthase-subunit-alpha
MEILDKKSNRMSRANLGVSERSEFPNLQRILDFLSLRNLLSNELFFTFVNLQQLFFK
>NZ_CP024703.1|WP_099989075.1|265263_266487_-|uracil-xanthine-permease
MEKLSLQTKLVLGIQHVLAMFGATVLVPFLTGLNPSIALICAGVGTLIFHSVTKGIVPVFLGSSFAFIGATALVFKEQGIAILKGGIISAGLVYVLMSFIVLKFGVERIKSFFPPVVVGPIIMVIGLRLSPVALSMAGYANNTFDKDSLIIALVVVVTMISISILKKSFFRLVPILISVVIGYIVAYFMGDVDLSKVHEASWLGLPAGAWETITTLPKFTFTGVIALAPIALVVFIEHIGDITTNGAVVGKDFFKDPGVHRTLLGDGLATMSAGLLGGPANTTYGENTGVLAVTKVYDPAILRIAACFAIVLGLIGKFGVILQTIPQPVMGGVSIILFGMIAAVGVRTIVEAQLDFTHSRNLIIAALIFVLGIAIGDITIWGTISVSGLALAALVGIVLNKILPEDK
>NZ_CP024703.1|WP_099972020.1|264771_265251_-|S-ribosylhomocysteine-lyase
MERIASFQVDHKKLNRGIYVSRLDEINGNYLTTFDIRMKLPNREPVINIAELHTIEHLGATFLRNHPTRKDDIIYFGPMGCRTGLYLILKGKLESKEVVELIKELFEFISKFEGDIPGASEIECGNYLDQNLPMARYEAEKFLKETLNNLKEENLVYPE
>NZ_CP024703.1|WP_099972021.1|263231_264743_-|diguanylate-phosphodiesterase
MKKIVYVLMLVALFLVGCGEKKEEKATATEDKIVTVAQGAKPKTLDPHMYNAIPELLVSRQFYNTLFSREKDGTIVPELAESYEYKNDKELDIVLKKGVKFHDGSELTADDVIFSIERMKEKPGAGVMVEEIDKVEKVNDYEVKILLKNPSSPLLFNLAHPLTSILSKKYVEAGNDISIAPMGTGAYKLVAYNDGEKIEMEAFQDYFEGAPKIQKLIVKSIPEDTSRLAALETGEIDIALGLSPISTQTVEANDKLTLISEPTTATEYICLNVEKAPFDNKDFRVALNYAIDKQSIVDSIYSGRARVAKSIVNPNVFGYYDGLEGYPFDVEKAKELVAKSGLKDTSFSLYVNDSPVRLQVAQIIQANLKEIGIDMKIETLEWGTYLQKTGEGDYQAFLGGWISGTSDADIVLYSLLDSKLIGLAGNRARYSNPEFDKEVETARVVLTPEERKEHFKNAQIIAQNDSPLVVLFNKNENIGINKRIAGFDYDATTMHKFKDLDIK
>NZ_CP024703.1|WP_099993817.1|272395_273895_-|AAA-family-ATPase
MCSIICCSIYIIQRKFIEDETNLESFKGHFLNGLIKYIPSDKEYSLKEFCNKVKEDKYNNNYVLIFENIDKRDKSKIFGEDFSKLKERICNKEDSELPKNLYILATTSKTSFHIEDIEFFKNFDFEKIDSNDEYIKNIGEMDEEIKEIFKINKKDFKFPLNTILYGPPGTGKTYNSIFYSVGIIKKDKSIIDIIEDKTKNISDIEKEEIFNNFNDFKEQGQIEFVTFHQSYSYEDFVEGIRPTLTTKDNEIKENSEDKKDLKYTIHSGIFKNICERAKNNQDKNYVLIIDEINRGNISKIFGELITLLEPTKRLEEIEELKIRLPYSGEEFGVPKNLYILGTMNTADRSIALLDIALRRRFNFIEMPPKYDLLKEKIEVENDKIELRELLKAINNRIEFLLDRDHLIGHSYLVKVETFDDLKEVFRNSIMPLLQEYFYDDFEKIKFVLNIKDDNNNFIIKKEIPKNFSDALKNKIEKKPIYLINEKAFNNCKNYIKIYN
>NZ_CP024703.1|WP_099992053.1|275020_275884_+|tRNA-pseudouridine(55)-synthase-TruB
MEGIILVNKPKGISSFDVIRKLKKILKTKKIGHTGTLDPLATGLMLICVGKATKLASDLEAKNKVYLADFEIGYATDTYDIEGKRIAENLIDVSKDNLELSLKKFIGDIKQVPPMYSAIKIDGNKLYHLARKGIEVERPERDVTIEYIKLLGFKDNKAKIETKVSKGCYIRSLIYDIGLDLGTYATMTELQRINVGEYSLTNSYTLEQMEEMAQNNNFSFLNSVEEIFSYDKYNLETEKEFTLFKNGNTVKIKDNLENKKYRVYYQDEFLGLANIENNNLLKGYKYY
>NZ_CP024703.1|WP_099992056.1|275907_277728_+|translational-GTPase-TypA
MKIKNIAIIAHVDHGKTTLVDCLLRQGGVFKTHELEKVEERVMDSDDIERERGITIFSKNASARYKDYKINIVDTPGHADFGGEVQRIMKMVDSVLLLVDAFEGPMPQTKYVLKKALEQGHRPIVVVNKVDKPNARPEDVLYMVYDLFIELNANEYQLEFPVVYASGKAGFSRKELTDENTDMQPLFETILEHVQDPDGDATKPTQFLITNIAYDNYVGKLAVGRIHNGTLKRNQDVMLIKRDGKQVKGKVSVLYGYEGLKRVEIEEAEAGDIVCVAGIDDIDIGETLADINDPVALPLIDIDEPTLAMTFMVNDSPFVGKEGKFVTSRHIWDRLQKEIQTNVSMRVEATDSPDSFIVKGRGELQLSILLENMRREGFEVQVSKPRVLFKEKDGKRLEPIELALIDVDDSYTGTVIEKMGVRKAEMVSMVPGQDGYTRLEFKVPARGLIGFRNEFLTDTKGTGILNHSFFDYEEYKGDIPTRNKGVLIATEPGVTVPYALNNLQDRGTLFLDPGIPVYEGMIVGEHNRENDLVVNVCKTKKLTNMRAAGSDDAVKLATPRKFTLEQALDYIAEDELVEVTPTNIRLRKKILKEGDRRKNWSALNNK
>NZ_CP024703.1|WP_099992059.1|277819_279379_+|alpha/beta-hydrolase
MKKFKFLMLFCLFGSMAFAAPKTTKALKNEYDLKFNPNKYVSKETEVNGKKVKYRAYENIVYVKNPIDKEYQNMNIYIPEEYFNNSSIGNYNSSNAPIFFPNTVGGYMPGKADKVGVGRDGKANSLSYALSKGYVVAAPGARGRTLTDKNGAYTGKAPAAIVDLKAAVRYLYFNDEVMPGDANKIISNGTSAGGALSALLGASGNSQDYLPYLTELGAADTRDDIYAVSAYCPITNLENADSAYEWMYNGVNTYSRMEFTRNTSAQEYNDRSLTRTTVQGSLTEDEIKISNRLKNIFPAYLNSLKLKDDKGNLLTLDKNGNGTFKSYLSLIIKNSANKALAEGKDISEFKKAFTMENGQVVAVDLDVYTHIGDRMKSPPAFDRLDASSGENNLFGDKKTDNKNFTKFSFDIANKEAIEYYQKGKFNDKSIKIVIPKMADKTIIKMMNPMNYIESAPTKYWRIRHGAIDKDTSLAIPAILAIKLKNSGKVVDFAAPWGQGHGGDYDLDELFNWIDTVVNN
>NZ_CP024703.1|WP_099987681.1|279435_279942_-|DUF5105-domain-containing-protein
MKKMFRYVLLVFVFLMLVACGKPDSQKAFEKNFKQTIADVSKKMKDGNEVSKMLAGILEKGSYKVNKVNEEKNMAELDVTIKSADFVKYMTEYLVALKPLFDSNMGEEAFQKKSLEYFENLTKKELDYTETDVIVHMEKVDGEWKVINTEDVLTAIFGGLTDAAADFN
>NZ_CP024703.1|WP_099986066.1|280215_280419_+|hypothetical-protein
MKKIPLVILVLAGILVGCTHTEKTATGGAIAGAAVGAMLGNDVRGTAVGAAIGGALGAGAGELTKNK
>NZ_CP024703.1|WP_099986065.1|280477_281329_-|DUF2262-domain-containing-protein
MQEQEIIALINSRGAFISENSKTNAELIAYVDCETNELFETSAKIEWEVSDKISLEDIKRFKIYHLKVKDLGENTFLLIDILQKDVKNALLKNTLKECEQNASVTVEEPNLGKFILDKTTKSLHSKLKWLSEKEEIDVYLNIDEDNRINTLKKVGAFFITLEKVFKDKKDWDKKLKTYAAEHLADLATELRKNSKSLFKFLKVWKWYFIGKMKLVSLAVETDGEIVATFDDRKLFLGHKIIVRANVDKNEVSSAIVENFNIEDYKKIEVSISETEIKEDNKEE
>NZ_CP024703.1|WP_099992062.1|281480_282236_-|DUF4241-domain-containing-protein
MQATKEWLEKWEKVKNKLQPNSNLVEYFTLKEIAGKEVDIMDIGPCSIPTGEFLVSDPLVYLASKYEKEYFQKIPTGEFRTEVCVVKATDGDCDRYAAVRLKFNDNEVSYFEEAMKGTEDLENINEGDFFGFNVDAGLACICDKKLHDLYCEFDKKWCDENPDGNIYDDYFADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPMFQSGFGDGAYPVYLAYDKDGNVCQLIVELIDIELAYSDIEDEEEE
>NZ_CP024703.1|WP_099992065.1|282248_282971_-|Fic-family-protein
MNKILEILLEEKAVKLKGGLYHLTQINFSYNSNHIEGSKLTEEETRYIYETNSFIGNKEKIVSIDDINETVNHFKCFDYILENIDILDEKLIKNLHKILKNNTSDSQKEWFKVGDYKLKANFIGDTKTTSPSNVKKEMKKLLEEYNSKNNITFDDIVDFHYKFETIHPFQDGNGRVGRLIMFKECLKNNIIPFIIDEEHKLFYYRGLKNYKDDKAYLIETCLSAQDKYIKLLDELEINVK
>NZ_CP024703.1|WP_099959108.1|283099_283786_+|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MKLVLIRHGESAWNLENRFTGWKDVDLSPKGIEEAKAAGKILKEMNLTFDVAYTSYLKRAIKTLNIVLEEMDELYIPVYKSWRLNERHYGALQGLNKAETAKKYGDEQVHIWRRSFDIAPPSIDKDSEYYPKSDRRYADLPDSEIPLGESLKDTIARVLPYWHSDISKSLQEGKNVIVAAHGNSLRALIKYLLNISNEDILNLNLVTGKPMVFEIDKDLKVISAPELF

Crispr_ID: NZ_CP024703_2

• CRISPR_ID: NZ_CP024703_2
• CRISPR_location: 522380-522459
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP024703_2

Consensus_repeat	Method
AAAGCTGAAGAGGCTAAAAAAGAAGT	CRISPRCasFinder

spacers of NZ_CP024703_2

>2.1|522406|28|NZ_CP024703|CRISPRCasFinder
TAAAAAGGAAGAAAAGAAAACTACTGTG

CRISPR arrays and Neighbor proteins around NZ_CP024703_2

CRISPR arrays

The CRISPR arrays of NZ_CP024703_2

>merge|NZ_CP024703|2|522380-522459|CRISPRCasFinder
AAAGCTGAAGAGGCTAAAAAAGAAGTTAAAAAGGAAGAAAAGAAAACTACTGTGAAAGCTGAAGAAGCTAAAAAAGAAGT

>NZ_CP024703|2|2|522380-522459|CRISPRCasFinder
AAAGCTGAAGAGGCTAAAAAAGAAGT	TAAAAAGGAAGAAAAGAAAACTACTGTG
AAAGCTGAAGAAGCTAAAAAAGAAGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024703.1|WP_099993829.1|536094_536403_+|HIRAN-domain-containing-protein	unknown	unknown	gnl|CDD|370129
NZ_CP024703.1|WP_099992290.1|532663_534487_-|molecular-chaperone-HtpG	unknown	unknown	gnl|CDD|235366
NZ_CP024703.1|WP_099992278.1|513679_515224_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|270330
NZ_CP024703.1|WP_099988959.1|534632_535175_-|flavin-reductase	unknown	unknown	gnl|CDD|224766
NZ_CP024703.1|WP_099992276.1|512563_512803_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	unknown
NZ_CP024703.1|WP_099971851.1|518437_519325_-|lysophospholipid-acyltransferase-family-protein	unknown	unknown	gnl|CDD|224476
NZ_CP024703.1|WP_147384142.1|519441_520143_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl|CDD|180148
NZ_CP024703.1|WP_099971848.1|522600_524448_+|HPr(Ser)-kinase/phosphatase	unknown	unknown	gnl|CDD|224410
NZ_CP024703.1|WP_099992280.1|515220_515943_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224050
NZ_CP024703.1|WP_099992286.1|528989_531416_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NZ_CP024703.1|WP_099992274.1|510444_512391_+|ATP-binding-protein	unknown	unknown	gnl|CDD|372641
NZ_CP024703.1|WP_099990680.1|515999_516545_+|glutathione-peroxidase	unknown	unknown	gnl|CDD|223463
NZ_CP024703.1|WP_099992282.1|525445_526855_+|peptide-binding-protein	unknown	unknown	gnl|CDD|226636
NZ_CP024703.1|WP_099985952.1|516629_518324_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP024703.1|WP_099992284.1|527777_528980_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NZ_CP024703.1|WP_099992288.1|531568_532456_-|fructose-bisphosphate-aldolase	unknown	unknown	gnl|CDD|180045
NZ_CP024703.1|WP_099971850.1|520143_521391_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl|CDD|223362
NZ_CP024703.1|WP_099971856.1|513236_513683_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|275265
NZ_CP024703.1|WP_005971064.1|526977_527757_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|187604
NZ_CP024703.1|WP_099990684.1|524466_525435_+|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	unknown	unknown	gnl|CDD|223691

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP024703.1|WP_099993829.1|536094_536403_+|HIRAN-domain-containing-protein	gnl|CDD|370129	pfam08797, HIRAN, HIRAN domain. The HIRAN domain (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. The HIRAN domain is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this domain functions as a DNA-binding domain that probably recognizes features associated with damaged DNA or stalled replication forks.	1.22327e-09
NZ_CP024703.1|WP_099992290.1|532663_534487_-|molecular-chaperone-HtpG	gnl|CDD|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_CP024703.1|WP_099992278.1|513679_515224_+|ABC-transporter-permease-subunit	gnl|CDD|270330	cd13612, PBP2_ProWX, Substrate-binding protein ProWX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ProWX of Helicobacter pylori is predicted to be involved in uptake of compatible solutes such as choline, L-proline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ProWX belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.25382e-180
NZ_CP024703.1|WP_099988959.1|534632_535175_-|flavin-reductase	gnl|CDD|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	5.85156e-16
NZ_CP024703.1|WP_099971851.1|518437_519325_-|lysophospholipid-acyltransferase-family-protein	gnl|CDD|224476	COG1560, HtrB, Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane].	5.92989e-78
NZ_CP024703.1|WP_147384142.1|519441_520143_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl|CDD|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	1.49907e-102
NZ_CP024703.1|WP_099971848.1|522600_524448_+|HPr(Ser)-kinase/phosphatase	gnl|CDD|224410	COG1493, HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms].	2.39007e-104
NZ_CP024703.1|WP_099992280.1|515220_515943_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	9.00615e-138
NZ_CP024703.1|WP_099992286.1|528989_531416_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	3.92037e-14
NZ_CP024703.1|WP_099992274.1|510444_512391_+|ATP-binding-protein	gnl|CDD|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	0.000267386
NZ_CP024703.1|WP_099990680.1|515999_516545_+|glutathione-peroxidase	gnl|CDD|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	3.12864e-85
NZ_CP024703.1|WP_099992282.1|525445_526855_+|peptide-binding-protein	gnl|CDD|226636	COG4166, OppA, ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism].	3.43307e-57
NZ_CP024703.1|WP_099985952.1|516629_518324_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.73479e-177
NZ_CP024703.1|WP_099992284.1|527777_528980_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	3.98837e-12
NZ_CP024703.1|WP_099992288.1|531568_532456_-|fructose-bisphosphate-aldolase	gnl|CDD|180045	PRK05377, PRK05377, fructose-1,6-bisphosphate aldolase; Reviewed.	0
NZ_CP024703.1|WP_099971850.1|520143_521391_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl|CDD|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	1.16044e-157
NZ_CP024703.1|WP_099971856.1|513236_513683_+|MarR-family-transcriptional-regulator	gnl|CDD|275265	TIGR04472, reg_rSAM_mob, mobile rSAM pair MarR family regulator. A number of human microbiome species from both the Firmicutes and the spirochete genus Treponema share a gene cassette encoding a pair of radical SAM enzymes and, in most cases, this MarR family transcriptional regulator as well. Sequence identity can exceed 96 percent, suggesting recent lateral transfer. These observations suggest the cassette confers resistance to a toxic compound such as an antibiotic.	1.491e-46
NZ_CP024703.1|WP_005971064.1|526977_527757_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|187604	cd05346, SDR_c5, classical (c) SDR, subgroup 5. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.73613e-112
NZ_CP024703.1|WP_099990684.1|524466_525435_+|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	gnl|CDD|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	3.35601e-82

Protein sequences

>NZ_CP024703.1|WP_099971850.1|520143_521391_+|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MEEKMNIDALLEELYAYSMFSIRLGLDNIKEICKHLGNPQNSYKVIHITGTNGKGSVSTTVERVLIDAGYKVGKYTSPHILEFNERISFNDKYISNEDVAKYYEKVKKIIEEHKIQATFFEVTTAMMFDYFKDMKAEYVILEAGMGGRYDATNICDNTVSVITNVSLDHTEYLGDTIYKIATEKAGIIKNCPYTIFADNNPDVKKAIEEVTDKYVNVLDKYRDSSYKLDFNTFTTNININGNIYEYSLFGDYQYKNFLCAYEVVKYLGIDENIIKEAIKKVVWQCRFEVFSKNPLVIFDGAHNPAGVEELIKIVKQHFSKDEVTVLVSILKDKDRVSMFRKLNEISSSIVLTSIPNNPRASTAKELYDNVENKKDFEYEEDPIKAYNLALSKKRKLTVCCGSFYILIKLKEGLNG
>NZ_CP024703.1|WP_147384142.1|519441_520143_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MKIGIIGAMHEEIVELKTSMTDINEIEISNLKFYEGKLCSKDVILVESGIGKVNAAISTTLLISNFKVDKIIFTGVAGAVNPDIKVTDIVIATDLVESDMDVTAGGNYKLGEIPRMKSSNFKADPYLFTLADSVATKLFGTEKVHKGRIISRDEFVASSEKVKKLREIFEAECVEMEGAAVAHVCEVLNVPFIVLRSISDKADDEAGMTFDEFVKIAAKNSKSIVEGILSIIK
>NZ_CP024703.1|WP_099971851.1|518437_519325_-|lysophospholipid-acyltransferase-family-protein
MYYIQYIIARFFIFLLLLLPEKLRFKFGDFLGNLTYKLIKSRRMTALMNLKMAFPEKSDEEIEKIARKSFRIMIKAFLCSLWFDKYLKNPKNIKIINQESMLNACKKNKGVMAATMHMGNMEASTVCTGENKIITVAKKQRNPYINDYITKLRGKANYMEVIEKNERTSRVLISKLREKKVIALFSDHRDKGAIINFFGKETKAPSGAVSMALKFDLPFLLVYNTFNDDNTITIYVTDEIELKKTGNFKEDVQNNVQYLINIMEDVIRKHPEQWMWFHDRWNSFREYKRSLKNKK
>NZ_CP024703.1|WP_099985952.1|516629_518324_+|ABC-transporter-ATP-binding-protein
MFKKFISYYKPHKKMFFLDLLAAFLISICDLFYPILTRSILYDFIPNRKIKTIFLFLFILALIYIFKMLSNYFVGYYGHIVGVKIQADMRRDLFKHIQNMPISYFDKNQTGDIMSRIVNDLIDISELAHHGPEDVFISGVLVLGSFFYLINLNPLLTCIVFVFIPILALLTIFLRKRMMRAFAETRTTVGAINANLSNSISGIRVSKSFNNSKFEFKKFEEGNSKYIIARKAAYFWLAVFQGGVYYIIDTLYLVMLLSGTLFTYYEKITVVDFVTYMLFVNLLITPIKRLINSVEQFQNGMSGFRRFYEVITVPQEEEGKIEVGKLNGDIVFDEVTFRYEENENVFENFSLNIKAGTNVALVGESGVGKSTICHLIPRFYEILSGKITIDDIDIKDMTLSSLRKNIGIVSQDVFLFTGTIKENIAYGKLDATDEEIYKAAKYANIHDYIMTLEKGYDTQVGERGIRLSGGQKQRISIARVFLANPPILILDEATSALDSITERNIQKSLDELSEGRTTLVVAHRLTTVRKADVIIVITKDGIAEMGNHDELMKLQGIYYKLNQV
>NZ_CP024703.1|WP_099990680.1|515999_516545_+|glutathione-peroxidase
MKIYDFTVKNRKGEDVSLENFKGKVLLIVNTATRCGFTPQYDELEALYSKYNKDGFEVLDFPCNQFGNQAPESDDEIHAFCQLNYKVKFDQFAKVEVNGENAIPLFKYLKEQKGFEGFDPKHKLTSILNEMLSKNDPDFAKKPDIKWNFTKFLVDKSGNVVARFEPTTSAEEIEKEIKKYL
>NZ_CP024703.1|WP_099992280.1|515220_515943_+|ABC-transporter-ATP-binding-protein
MIEFKNISKSYGKQEVIKDFNLTIECGTFLTIIGSSGSGKTTILKMVNGLIKADKGEVLINNKNIQDEDLIELRRKIGYVIQGNILFPHLTVFENIAYVLNLKKYDKKEIEKIVNEKMNMLNLSRDLKDRLPDELSGGQQQRVGIARALAANPDIILMDEPFGAVDAITRYQLQKDLKDLHKKTEATIVFITHDITEALKLGTKVLVLDKGEIQQYDVPKNICSNPKNDFVKQLLKMAEM
>NZ_CP024703.1|WP_099992278.1|513679_515224_+|ABC-transporter-permease-subunit
MISQLTKLLTEDFKFFLNLTVEHILISLLAISIASVLGIILGIIISEYRKFSGLILGTVNILYTIPSIALLGFFITITGVGNTTALIALIIYALLPIIRSTYTGIVNINPLIIEASEGMGSTKLQQLFKVKLPLALPVLMSGIRNMVTMTIALAGIASFVGAGGLGVAIYRGITTNNSAMTFLGSLLIAILALIFDFILGIIEKRLTNHKRTKYKVNFKLIILGLFIIIFGAYFSLSSKKDKSINIATKPMTEGYILGQMLTELIEQDTDLKVNITNGVGGGTSNIHPAIVKGEFDLYPEYTGTSWEAVLKKEASYDESKFDELQKEYKEKYNLEYVNLYGFNNTYGLAVNKNIAEKYNLKTYSDLAKVSNNLIFGAEYDFFEREDGYKELQKVYNMDFKKKIDMDIGLKYQAMKDKKIDVMVIFTTDGQLAISDVVVLEDDKKMYPSYRAGTVVRSEILSEYPELKVVLEKLNNILDDKTMANLNYQVESEGKKPEDVAREYLQEKGLLGVKQ
>NZ_CP024703.1|WP_099971856.1|513236_513683_+|MarR-family-transcriptional-regulator
MQRLGGFLISKLKQLHSRSLAQCISEQGIDAFSGEQGKILFVLWQKDKITQKELASETGLAKNTITVMLEKMEKNNLIKRITDENDKRKSLVILTDYANSLKKSFDEISDEMLQKFYKNFSEEEIDKFEEYLHRIIRNLEENEEGEEL
>NZ_CP024703.1|WP_099992276.1|512563_512803_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MLLTSKNPINSKIIRVNLGIISKLSETIISYALINQITTISKSRLMKPKVKGKKVNVKLNTSQLDDIEKELKNYLLKTS
>NZ_CP024703.1|WP_099992274.1|510444_512391_+|ATP-binding-protein
MLADLIGSVNRIKINRNNGVFTIFEAVVNSIQSDSKNILVELKTEKDNQNSLEVIDKKEKYILKEVIITDDGYGFNDENFESFKKINSTHKFKLGGKGVGRLTWLKVFENIEIESIYKQDKKYFFRKILFNLDDEVKEIETKELSSGEQNQIKTTIKFKKPKVDFLEKFPITAEDLGEKILYHCLSYLIEGVFEITIKDNINKYKCKDEYRNQLENDIKKDVIKINTEEFEIIYIPIDKKKLSKHEISFTANKREVYRRGMSGELLKSSFKIDKKEKNILAFIRGNYLDNNVSEDRTRFLFSEEDGGLFLSEKEIINSVSNKIITIFDKAIEIIRAENKEKINTFLIENPYYRAIYRYNETIVDEINSKTTNDEIEEKFEKTVRQKMKEIKTNIKTLKLDGNYQEKFEKTIEKIDVLKQLDLAKYVVHRKIIIELFDKILEKKEKDTTYYYEKDLHNLIFPMKKYGEEVDYNQHNLWLIDDRLSYHTFLSSDIPFNEFNENSINKERADLIILNNLISFSNKEVEELHSNVIIVEFKRPGRESLTESDLNNQVYKYIEELLENKIKTKNGKRIEIDKNAIFNVYIICELSSELLKTLRRANYKEMLDGQGYYFYNDTYNTFIQVFSLNKVLKDAKLRNKIFFNKLGVL
>NZ_CP024703.1|WP_099971848.1|522600_524448_+|HPr(Ser)-kinase/phosphatase
MYTYTTVREIADSLNFEILNEGNLDLKIDIPNIYQIGYELVGFLDKDSDELNRYINICSLKESRFMATFSKERKEKVISEYMALDFPALIFSRDAIIAEEFYYYAKKYNKNILLSNEKASVTVRKLKFFLSRALSIEEEYEDYSLMEIHGVGVLMTGYSNARKGVMIELLERGHRMITDKNLVIRRVGENDLLGYNGKKKVKLGHFYLEDIQNGSVDVTDHFGVKSTRIEKKINILIVLEEWKEKEFYDRLGLDTQYETFVGEKIQKFVIPVRKGRNLAVIIEAAALSFRLKRMGHNTPLEFLNKSQEIIQKKKKEREENMNTNSLAVTKLINEFDLEVKYGRDKVTSTYIKSSNVYRPSLSLIGFFDLIEEVSNIGIQIFSKMEFNFLEKLCPTERINNLKKFLSFDIPMIVLTEDANAPDYFFELVQKSGHILAIAPYKKSSQIIANFNNYLDSFFSETISVHGVLVELFGFGVLLTGKSGIGKSETALELIHRGHRLIADDMVKFYRDTQGDIVGKSAELPFFMEIRGLGIIDIKTLYGMSSVRLSKRLDMIIELKALDNSDYMSAPTTHLYEDVLGKPIKKRILEISSGRNAAAMVEVMVMDYMSGLLGQK
>NZ_CP024703.1|WP_099990684.1|524466_525435_+|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA
MKEFIEKFKEIKAIIEENQNIILTAHINPDGDAVGSGLGLFLTLKETYKDKNIRFVLQDSIPYTTKFLKGSEEIETYNSEEKYSTDLLIFLDSATRERTGETGKNIEVKLSINIDHHMSNPSYGDVNCVITYSSSTSEIVYHFLKYMDYPISLATAEALYLGLVNDTGNFSHSNVKVETMMMATDLISLGVNNNYIVTNFLNSNSYQTLKMLGDALTKFEFYPEKKLSYYYLDHATMEKYGAKKEDTEGVVEKILSYHEASVSLFLRQEADGKIKGSMRSKYETNVNKIAALFGGGGHYKAAGFSSDLSPKEILDIVLKNLD
>NZ_CP024703.1|WP_099992282.1|525445_526855_+|peptide-binding-protein
MKKIKILFILILSLLLISCGNKEETVEKVEQIFYTAMPKQEYNLNPQSYTGNERALITQIFEGLTELKDEGARYVGVLNIEHSDDFKEWTFTLRDDLKWSDNQKITAETYLESWLNTLENSNSDEIYRMFVIKGAEDFSKKKLDKNSVGIKVQENKLIVTLNSPIKNFDEWVSNPIFYPIREENASLTLDKKIVNGAFKVSTYNEDSIVLVRNENYWDSINTKLKEVNIALVENDIMAYEMFSRNEIDYFGEPFYSIPFDRLGQVNTLPEKLVFPSTRYWYISIPNETKEKIFEKAELRKLMYAVTDPEFMGKVIIENNSPSIFEHPHPSSEVLNKAKEDFEKLNIKFSETPYIAYFSADKLLQKKLLLSTVKEWVGNFKIPIRVSSNTDSPITFKIENYLVGTNNKNDLYHYINYKYNTKIKTDEEFLDSLVVIPLLQEYNTVLSRSSVRGLNLTPSGDLYLKYINMQ
>NZ_CP024703.1|WP_005971064.1|526977_527757_-|SDR-family-NAD(P)-dependent-oxidoreductase
MESNIKGKIAFISGASSGIGKATAEKLAEMGANLIICARRENILNELKEKLEKQYGIKVKTLVFDVRSYSDVLKNINSLDDEWKKIEILVNNAGLAVGLEKLYEYNMEDVDRMVDTNIKGFTYIANTILPLMIATDKVCTVINIGSVAGEIAYPHGSIYCATKFAVKAISDSMRSELIDKKIKVTNIKPGLVDTEFSLVRFKGDKERADGVYGGIEPLYAEDIADTIAYVVNLPDKIQITDLTVTPLHQANAIHIHREK
>NZ_CP024703.1|WP_099992284.1|527777_528980_-|tetratricopeptide-repeat-protein
MNKMAKEYQEIFFEVKILPVEQLDIERVEKLIRAYIADKNYEKALEVLRVVEDREKNNPSINSEFGYCLVELKQFDEAAKYFLKAKNQGREDAWIYSQLGWAYRNAEKYKEALEAYLKAQQLGDKVAWTNAEIGMCYKELGNYEEALKYYLIIINSGELDNDIYKKTWVLSEIAYIYQNIDKYEEALEYFKKLEKIVVGDYQFYLDHAYCLIFVNHYTEAIAKIEKALELHEDIYSISQLAFCYRNLGEYEKALRYYLKAKSLGREDAWINLEFGLCYKELLDFEKSLKHYLKAYENEIYKYNTFLLLEIAKIYNIFDNYTEAFKFLTRVLEMSIKNKDICIEMGKCLIGLGRYEEAIENFLEARSFSLEMGNSTYEEDEKLAYCYEVLGDNEKAKVYKK
>NZ_CP024703.1|WP_099992286.1|528989_531416_-|tetratricopeptide-repeat-protein
MKTVEEILTKIDSLDNLEKYQEIIDMIEELPVEQLNSQIISEQGRAYNNIGEYNKAIEILKTIETEEKDTRRWNYRIGYSYYFLDDYENAEKYFLRADEIGPDDDEIKNYLLNIYIELSKKIIEENQEEAIEYALKAKNYIKTEDNKVQVYSYLAWMYDRIEAYDIAEDLLKSIINCKTDPRNEIWIYSELGYCLGEQHRYEESLESLLKASEMGRNDVWVNSQIGWTFRILGKYEEALEYLFKAKELGRDDDWINAELGICYKEIDKFEEALESYLLANEKNGEKSIWILSEIAWIYGVLDKFDDELNYLAKVKKLGRKDEWINAEYGKVYARIEKYEEALKYFKKAKKLGQDDAWINIQMAICFKRLNKLKKSLEHYLLAEKFKDYKKDIWLLSEIAWTYDGLGKYKDGLKYLKKIDKLGRKDCWFYTEYGFCLMRLEKYKEAITKFKKGLQVKEELNEEIYLNSQIGFCYRLLGSEKTALKYHLKAKELGRNDAWINSEIGICYKDLDKYEEALKYYLLAYEEDKEEIWLLSDIGWLYNELDRYEEALEFLLEAEKLGRDDSWINAEIGQCLGRLEKYDEGIERLKKALELLEKDKRRNNTGEKIFINSEIGWLIGRKEDSNAEEALYYLNAAKALGRDDMWLNSEIAWELAYNDDKAKESIKYFEKAIKLGRKDEWIWSRVANIYFDLEKFDKALDAYSKAYKLAKNSWYICNMGRSLRRLGRYEEAVKKLLQSRKLSLKEGDVVDLEDLELAYCYAALGDKKKAEKHMKLSIDSLGSRAENEEHLKEQFDEIKEMISVLSKPS
>NZ_CP024703.1|WP_099992288.1|531568_532456_-|fructose-bisphosphate-aldolase
MNEKLEKMRNGKGFIAALDQSGGSTPKALKLYGINEDQYSNDAEMFDLIHKMRTRIIKSPAFNEEKILGAILFEQTMDSKIDGKYTADFLWEEKRVLPFLKIDKGLNDLDADGVQTMKPNPGLADLLKKANERHIFGTKMRSVIKKASPAGIARVVDQQFEVAAQIVAAGLVPIIEPEVDINNVDKVECEEILRDEIRKHLNALPETSNVMLKLTLPTVENFYEEFTKHPRVVRVVALSGGYSREKANDILSKNKGIIASFSRALTEGLSAQQTDDEFNKTLAATIEGIYEASVK
>NZ_CP024703.1|WP_099992290.1|532663_534487_-|molecular-chaperone-HtpG
MRKEEKIFKAETKELLNLMIHSIYTNKEIFLRELISNANDAIDKLKFQSLTNNELLKDDNKFKIEISVDKENGTLTIKDNGIGMTYDEVDENIGTIAKSGSKVFKEQLEAAKKADIDIIGQFGVGFYSAFIVADKVTLETRSPYSENGVRWVSSGDGNYEIEEISKENRGTEITLHLKDGEEYSEFLEEWKIKDLVKKYSNYIRYEIYFKDEVINSTKPIWKRDKKELKDEDYNEFYKATFHDWNDPLFHINLKVQGNIEYNALLFIPKKLPFDYYTKNFKRGLQLYTKNVFIMEKCEDLIPEYFNFISGLVDCDSLSLNISREILQQNSELQAISKNLEKKIISELEKVLKNDREKYIEFWKEFGRSIKGGVQDMFGMNKEKLQDLLIFVSSHDDKYTTLKEYVDRMGETKEILYVPAESIDAVKALPKMEKLKEQGREVLILTDKIDEFTLMAMRDYLGKEFKSINSSDFKLSDDKEKEEEVKKIADENKTLIEKAKEFLKDKVNEVELSNNIGNSASSLLAKGGLSLEMEKTLSEMTNNNDAPKAEKILAINPEHVLFDKLKAAEGTDNFNKLVDILYNQALLLEGFSIENPVEFIKNLNDLLA
>NZ_CP024703.1|WP_099988959.1|534632_535175_-|flavin-reductase
MTKRKIDVLDYSSKILKALSKGVLLTVKDDEKINTMVISWGALGIEWNKVLFTTYIRENRYTKAILDKALNFTINIPLEKIDSKVFGIAGTKSGRNVDKIKEANLTLVDSDIISSPAIKELPITLECKVLYKQKQVLENLPEDIVKKDYPQDVDGTFVGANRDPHTAYYAEIVAAYIIEE
>NZ_CP024703.1|WP_099993829.1|536094_536403_+|HIRAN-domain-containing-protein
MGVIHLTAKVTSVLTHLINELSLGQAITLVVETDNPYDNEAVAIYYKDKKLGYVPKEKNSFLSTLLYYGYGDILEARIQYVNVENHPERQFRVVVKIKDNRK

Crispr_ID: NZ_CP024703_3

• CRISPR_ID: NZ_CP024703_3
• CRISPR_location: 1136887-1137086
• CRISPR_type: TypeV
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: cas14j

Consensus repeat of NZ_CP024703_3

Consensus_repeat	Method
AAGACTGGCGCTCTACCAACTGAGCTA	PILER-CR

spacers of NZ_CP024703_3

>3.1|1136914|52|NZ_CP024703|PILER-CR
ATGACGCAAATGGGGTGACCGACGGGGATCGAACCCGCGACAACCAGTGCCA
>3.2|1136993|67|NZ_CP024703|PILER-CR
CGGTCACCATTATAATATAAGTTTTTGGAGCGGGAAACGAGGGTCGAACTCGCGACATTCAGCTTGG

CRISPR arrays and Neighbor proteins around NZ_CP024703_3

CRISPR arrays

The CRISPR arrays of NZ_CP024703_3

>merge|NZ_CP024703|3|1136887-1137086|PILER-CR
AAGTCGTGTGCTCTACCAACTGAGCTAATGACGCAAATGGGGTGACCGACGGGGATCGAACCCGCGACAACCAGTGCCACAAACTGGCGCTCTACCAACTGAACTACGGTCACCATTATAATATAAGTTTTTGGAGCGGGAAACGAGGGTCGAACTCGCGACATTCAGCTTGGAAGGCTGACGCTCTACCAACTGAGCTA

>NZ_CP024703|3|1|1136887-1137086|PILER-CR
AAGTCGTGTGCTCTACCAACTGAGCTA	ATGACGCAAATGGGGTGACCGACGGGGATCGAACCCGCGACAACCAGTGCCA
CAAACTGGCGCTCTACCAACTGAACTA	CGGTCACCATTATAATATAAGTTTTTGGAGCGGGAAACGAGGGTCGAACTCGCGACATTCAGCTTGG
AAGGCTGACGCTCTACCAACTGAGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024703.1|WP_099992816.1|1146612_1149018_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NZ_CP024703.1|WP_005965599.1|1132245_1133271_+|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|376439
NZ_CP024703.1|WP_099992808.1|1136219_1136522_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP024703.1|WP_099992818.1|1149504_1150359_+|radical-SAM-protein	unknown	unknown	gnl|CDD|223803
NZ_CP024703.1|WP_099992802.1|1133267_1134041_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224045
NZ_CP024703.1|WP_099989864.1|1141981_1142680_-|hypothetical-protein	unknown	unknown	gnl|CDD|223455
NZ_CP024703.1|WP_005971762.1|1140915_1141767_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224059
NZ_CP024703.1|WP_099958185.1|1135077_1135290_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP024703.1|WP_099992810.1|1137320_1139729_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NZ_CP024703.1|WP_147386516.1|1131373_1132243_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|223687
NZ_CP024703.1|WP_099992814.1|1144023_1146423_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NZ_CP024703.1|WP_099992804.1|1134052_1135003_+|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NZ_CP024703.1|WP_099992806.1|1135523_1136096_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP024703.1|WP_099992812.1|1139750_1140800_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NZ_CP024703.1|WP_099992820.1|1150785_1151745_+|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl|CDD|225364
NZ_CP024703.1|WP_005971728.1|1128212_1128590_+|RidA-family-protein	unknown	unknown	gnl|CDD|129116
NZ_CP024703.1|WP_099992798.1|1125292_1128121_+|DUF3427-domain-containing-protein	unknown	unknown	gnl|CDD|223989
NZ_CP024703.1|WP_099992822.1|1152407_1153511_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl|CDD|223747
NZ_CP024703.1|WP_099972259.1|1142679_1143858_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|379131
NZ_CP024703.1|WP_099992800.1|1129261_1131235_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|238657

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP024703.1|WP_099992822.1|1152407_1153511_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	2e-112	371.2	21.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP024703.1|WP_099992816.1|1146612_1149018_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	6.75822e-13
NZ_CP024703.1|WP_099992818.1|1149504_1150359_+|radical-SAM-protein	gnl|CDD|223803	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion].	1.19179e-72
NZ_CP024703.1|WP_099992800.1|1129261_1131235_+|TonB-dependent-receptor	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.30327e-57
NZ_CP024703.1|WP_099992812.1|1139750_1140800_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.31146e-07
NZ_CP024703.1|WP_099989864.1|1141981_1142680_-|hypothetical-protein	gnl|CDD|223455	COG0378, HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].	9.85604e-70
NZ_CP024703.1|WP_005971762.1|1140915_1141767_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.81363e-46
NZ_CP024703.1|WP_099992804.1|1134052_1135003_+|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	1.07701e-14
NZ_CP024703.1|WP_099992810.1|1137320_1139729_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.08756e-21
NZ_CP024703.1|WP_147386516.1|1131373_1132243_+|ABC-transporter-substrate-binding-protein	gnl|CDD|223687	COG0614, FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism].	4.31151e-38
NZ_CP024703.1|WP_099992814.1|1144023_1146423_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	7.92057e-22
NZ_CP024703.1|WP_099992802.1|1133267_1134041_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	4.39391e-101
NZ_CP024703.1|WP_099992820.1|1150785_1151745_+|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl|CDD|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	5.37211e-136
NZ_CP024703.1|WP_005971728.1|1128212_1128590_+|RidA-family-protein	gnl|CDD|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	3.30004e-61
NZ_CP024703.1|WP_099992798.1|1125292_1128121_+|DUF3427-domain-containing-protein	gnl|CDD|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.00375e-92
NZ_CP024703.1|WP_099992822.1|1152407_1153511_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.93999e-60
NZ_CP024703.1|WP_099972259.1|1142679_1143858_-|ABC-transporter-substrate-binding-protein	gnl|CDD|379131	pfam13343, SBP_bac_6, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	1.38087e-77
NZ_CP024703.1|WP_005965599.1|1132245_1133271_+|iron-ABC-transporter-permease	gnl|CDD|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.14306e-92

Protein sequences

>NZ_CP024703.1|WP_099992808.1|1136219_1136522_+|hypothetical-protein
MEVKVMNQNEKKEVMGKFAKKLENAIKREVAVTKEIENDKALIKYLEAQKAAGAALDTTAYESYDAWIDTIKKQIKKSESTLTNIEFKKVELEAVNPYLA
>NZ_CP024703.1|WP_099992806.1|1135523_1136096_+|hypothetical-protein
MKKFFRVFLFGLMLLVGLIFASCGKKELTGLHKEFDIIFNGIKEEVTTEFKNNMTSLEEEIKNSSQNELEAKLQLFGIEVIYEAFNQASYDVVSINDMGDKAELKIKVKGVDFFEAFQQIMTNTTEEKSNLLNEIEGLVKKIKKGKAPVIEQEMDIEMTKENDTWTIPERQKYVLMKRMMGIQKGTIFDN
>NZ_CP024703.1|WP_099958185.1|1135077_1135290_+|hypothetical-protein
MNRDAKFINFSEEHELDYILKKYGKETSKENRDLLKEFGKQAKELLGKTMLEHQDLYKYIEDNSLAEKLK
>NZ_CP024703.1|WP_099992804.1|1134052_1135003_+|sugar-phosphate-isomerase/epimerase
MYKLLNMADFCSNEELEKDMQYLSQKYGFDGFELIKFFDGDNSPLKEYIKGYHMRFFPSWLELYLEDFTSLYDELKDEKYFKSLCGGHSKKELIEYYKKELERAKELEVEYVVFHACNVKVTEAMTYDFKYSDKEVLTAVISIINDIFEDEEYNFTLLFENLWWSGLKLTNKEEIEYLLNEVKYKNVGFILDTGHMINNNRDIKNSKEGIEYIKKNLENIGEYKNLIYGMHLNYSLSGEYVNKSIKENREKNLDIEEIMNNVYQHVGSIDYHDPFEDKEILDIIKSLPLKYLVFELIGNTQEELEKKIQRQCNIFN
>NZ_CP024703.1|WP_099992802.1|1133267_1134041_+|ABC-transporter-ATP-binding-protein
MKNVLEVKNISYSVGENKILKDISFKCQSGEIIGIIGPNGSGKTTLLKSINGINSISSGDISFNNKSLKEYGEKELARDISFMNQNTNIEFDFSCIDIVVLGRYPYLERFQEYSKKDIELAEKYMELTDTLKFRDKSILQLSGGERQRVLFAKILTQESQVILLDEPTASLDMRHEEDLLKEVSKERAKDKIVILVIHNLRTAIKYCSRLILLSNGNIVKDGSVEEVITEENLNNVFGIKTKVYYNEISKSLDFCII
>NZ_CP024703.1|WP_005965599.1|1132245_1133271_+|iron-ABC-transporter-permease
MKYRINFNLFLFFLLIGIIIFSLFYGAVRVPISDVVKILLNKTGLFNLEITKKSYVPIVFFVRFPRIMVAVIVGGALALCGCTMQSLLKNPIVDSGIIGISSGASLGAVIAISLGFTATNIFAMPLFSGAFALIISAIIYKISTLRGRTDNLLLILSGIAIGSFVGAITSVILTSLAETEMKEYIFWAMGSLNGRRWEHFLFGLIPIAILSPILFYYGKELNILLLGEEEAKSLGINIKKIRAKILIIIALLTAISVCISGNITFVGLIVPHILRKIIGSDNRKLLKSSFLAGACFLTFSDLLSRIVLAPKEISVGIVTALIGAPYFIYLIVKIRREGKTL
>NZ_CP024703.1|WP_147386516.1|1131373_1132243_+|ABC-transporter-substrate-binding-protein
MKKLFLFLILLFSFTIVNAKGAQAKKYNRIVSLTLNGDEMLFGLVSENRIAGLSGKINEDKEISNIVDKAKKFPKVESSEEVLISLEPDLIIVADWLSKKIGYLSELTGAKVYILKTANSYEEQKKSIKDLANLVEEKENGEKIITNMDNRLKALQNKIAKKYKGPKPRILMYTTFGSTSGKNTTFDDMVRLINGINVISEAGINKYQDISKEKIIELNPDIIIVPIAKKYDNVAKVSKLFFEDPSLKNVKAVKNKKVYFVQYKDISATSQYMIDNIENLAKVVYQFKE
>NZ_CP024703.1|WP_099992800.1|1129261_1131235_+|TonB-dependent-receptor
MKKKFMLLALIVLGSVSAFAEETPVLELKQTVVTSDSFGTSVRETTKNMTVVNAKEIKEKGAKTIADALRGVPGVVVREMDGSSPTIDLRGSGATAQFNTVILLDGIPVSGLAGFNLNSVPVEEISKIEVLQGAGAVMYGDGAIGGVVNIITKAPTNKTVYGGAGLEVGSWGTLRENVHLGGKVGDKLLLNASYSGNTSKDYRDRSPQYENKKDKTDSLWLRGKYLLDNGSIAINYNHSEDKDYYTGSLSKEQFDKNPRQVGSWSGYTYGINDIVNAKYNQKINDKIDIFLTAGYYHNKDKFQNNSTSEYFLRPEVKYTYAKDSYVTLGLDYRDGKRDFKDDVFVNGVSQKAPDDKRESFAGYITNKSTFGKWQFTQGYRREKVKYEYSSKVYNPITWQLSEVKPQSADYASNDSFEIGVNYLYSDTGNVFFNYTRALRTPTIQDAGAWYGPVKTQKNDIFEIGLRDAYKNTSIATSVFYINSKNEIYYDKTNPFSSNNQNFDGKVRRIGAQLSMAHYFDNLTLRERVSYIVPKVTSGTYDGKEFAGVSRWTVNAGATYKFTKGLTANVDAYYQSNAYAEDDFDNYFSKGNNYITVDANLSYAFENGIELYTGVSNLFDKKYADAVTSTRSSWGAGPRKVYYPANGRSVYAGIKYTF
>NZ_CP024703.1|WP_005971728.1|1128212_1128590_+|RidA-family-protein
MKRVINTTNAPAALGPYSQAIEANGVLYVSGQIPFVPATMTLVSEDVEEQTKQSLENIGAILKEAGYEFKDVVSATVYIKDMNDFTKINGVYDKYLGEVKPARACVEVARLPKDVKVEIGVIAVK
>NZ_CP024703.1|WP_099992798.1|1125292_1128121_+|DUF3427-domain-containing-protein
MENILLEALKTSSIDFNIDSDDKYQYELIANREEKIVTRLRKYFEDCDEFVISVAFITMGGISLFLEELKNLENKGIKGKILTGDYLTFTEPKALKKLLSYKNIDLKVATNRKHHTKAYFFRKGKIWTLIVGSSNLTQGALTVNFEWNIKVNSLENGKIVKSVLETFNKEFDSLKTLTEEDIENYQKRYEQLKKLIEVNNQNIDLNEIKPNSMQVQALKNLEETRTENDRALLISATGTGKTYLSAFDVKQAKAKKILFVAHRKVILERSKISYQRILKDKKLEIFDSSFQINDKDEVVFAMVQTLNKEKNLNIFPKDYFDYIIIDEVHHGGAKTYQSIFEYFKPKFLLGITATPERTDDFNIYQLFNYNVAYEIRLQDAMKEELLCPFHYFGISDIVIDGKSIDEKTSIKNLTSDERVRHILEKSKYYSYSGEKLHCLVFVSKVEEAKILVEKFLEQGVKALALSSENSDNEREEAIRKLEKGEIEYIISVDIFNEGVDIPCVNQVILLRPTTSAIVYIQQLGRGLRKHKNKAYTVVLDFIGNYEKNFLIPIAISQNNSYDKDFMKRFLMNATDFLAGESSISFDEISKERIFENINKVNFSNRKLIEEDFKLLESQLGRIPYLYDFYIKNMLSPTVILKYKKDYDEVLKNIAPRYRAGSLNSIEKKFLIFLSTFFTPAKRVHEMLILKELFTKEKLNIGDIESILKDKYSLTDQENNIKNAFEHLSKEIFITLSTTKAFEPVLYRKENYYFLDENFKNSYSTNPYFKILIDDLIKYNLAFAENNYNNFVKESIKLFGEYTKQEAFWYLNLNFNNGFQVSGYTPFENERKLLIFITMDNLSERADYSNEFYDAQTFSWFSKSSRYLKKDNKLTIEGKIAENFYEINVFVKKNNGENFYYLGDVEKVLSAKEIKDSQGKSMVKYIFKLKKDVKKELLDYFNM
>NZ_CP024703.1|WP_099992810.1|1137320_1139729_-|tetratricopeptide-repeat-protein
MKETLLEEIERLHDLEKYQEIIDLIEALPAERLNTELIGQLARAYNNVENYAKGLELLKSIEFEEGHSLIWNWRTGYSYFFLDDFANAEKCFLKAYELDPDDNDTSDFLITIYRNLAKLENENGNSEKSIEYALESKKYAYDEEGRIETDSFLAWTYNRYGKYEEAEEILKNQLAGNKDNQWAYSELAYSLSEQGKFEEALENCFKAEDLGRNDDWLFTRIAICYKNLGKNEEALEYYLKALELSEDDIFIMSDIAWLYDITDRYEEALKYLERLEELGQDDSWTNTEFGYCLSKLGRYEEAIEKLNHALEVEAENDDKDISYIYARLGWCKRKLGMYDEAIEDFNKAKKWGRNDAVINAEIGHCYKAKDEYEEALKYYLQAEKFDKKDPLIMSEIAWHYGALGLYSESVKYIKKAMRLGRNDAWINIEYGACLAGLDKYEEAIEKFEYALSLNDEDKDRDLAFTYGQLGCCHRNLENYEEAIKYLMLSKEEGRNDVWTNLELAMCYENLEDYEKALEYALVAYELDKDDIGAISEVATIYDNLENYEEALPFLLRAEELGRNDEWINTEIALNLGRSGKTHEALERLEKSLTLVDEDRINQRIFINSEIAWNYGRLEEPHPEEALKYLNIAKELGREDAWIYSQIGYQLGYNLETRKEALEYFDKALELGQNDAWIFEMRGTILLDFKRYEEALDSFKKAYDLNDDSWYLYSIGRCLRGLGRYEEAIEVLLESRQLSLDEDDVVDGEDLELAHCYLGLGDKDNAQKYLNSARDSIDKQGTLNDDIKREIEEIEKGILSLKN
>NZ_CP024703.1|WP_099992812.1|1139750_1140800_-|tetratricopeptide-repeat-protein
MDQKFWDKIDSFGQNGEYDKIVKEIKKLPADKMDMELINVLGRAYMYLGDLGNALDTYLSFIGKAEEDTLNADIWLYSEAGWTCNEFEDFEQGLKYLLEAEKLGRDDEWLNTEIGQCLGRLERYEEAIKRLEKSLKLIEADEAENGDEKVNEKIFIVSELGYLHAVQGKNEEALKYFYTAKDLGRNDGWIYLHLYHNLKTTKGEEEALKYFEEQAKIEDKNPVLLEALGNIYMLEAANYEKAEKIFQKAFALSGDGQQLFNRGRALAALKKYEEAIEVLLQSRRISEQEGDVTDGEDVELVRCYIELKDKKNAEKYLELAREGADNVADEFIDEYEEELDQLEDMIDEL
>NZ_CP024703.1|WP_005971762.1|1140915_1141767_-|ABC-transporter-ATP-binding-protein
MSIDNNELDEMDFDLLDILGVTEQKVESITLLPGYNKKGEKEGYEELVIKSGEIVAIVGPTGSGKSRLLADIEWGAQGDTPTKRTVLVNGELMDAKKRFSPSYKLVAQLSQNMNFVMDLTVREFIDLHAESRLVLDRESVIEKIFNQANELAGEKFTIDTPITSLSGGQSRALMISDTAILSTSPIVLIDEIENAGIDRKKALDLLVGNNKIVLMATHDPILALMGDRRIVIKNGGINKVIESTPEEKNILGALTELDDVVQGMRNKLRYGERLELDFEIKKK
>NZ_CP024703.1|WP_099989864.1|1141981_1142680_-|hypothetical-protein
MKLITVSGPPSSGKTSLIIKTIESLKAQNIKVGIVKFDCLYTDDDVLYEKAGILVKKGLSGSVCPDHFFASNIEEVVQWGQANGVDLLITESAGLCNRCSPYLKDIKAVCVIDNLSGINTPKKIGPMLKLADIVVITKGDIVSQAEREVFASRVQTVNPKAAIIHINGLTGQGTYEFGSLIMDDNEEIDTVLERKLRFPLPSAVCSYCLGETRIGNEYQLGNIRKINFEENN
>NZ_CP024703.1|WP_099972259.1|1142679_1143858_-|ABC-transporter-substrate-binding-protein
MYISKSMSIKSIVEKYPETIPVFANIGFKGLDNPAVLQKLEEQGITLEKAMMIKKEDVDAFIPMLQQAIASVEREDEGVKEASLMGLLPCPVRIPLLEGFEKYLADNKDIKVKYELKAAYSGLGWIKDEVIDKNDIDKLADMFISAGFDLFFDKDLMGKFKEQGIFKDMTGIEKYNTDFDNENIHLKDPHGDYSMIGVVPAIFIVNKAALNGREVPRSWGDLLKPEFAKSVSLPIADFDLFNSILIHIYKLYGFEGVKSLGHSLLSNLHPAQMVEAKEPVVTIMPYFFSKMVPEKGPKEVIWPKEGAIISPIFMLTKASKAKELEKVIKFMSGKAVGDTLANQGLFPSVHPEVKNPVNGRPMLWVGWDFIYSNDMGELIKKCEETFKEGAAE
>NZ_CP024703.1|WP_099992814.1|1144023_1146423_-|tetratricopeptide-repeat-protein
MKEKLLEKIENLNEMEKYQEIIDLIEALPAEQLNTELMGELGRAYNNIEEYEKGLEILKSIENEVGDTALWNWRIGYSYFFLEDYTKAEKHFLKVCEQEPDDEKACDFLVGTYIALGEIEEENGNSEKAIEYAFEAKKYAKTRGNKIDTEIFLASLYNRHMRYTEAEEILRPILAKNKRDVEGNYELGYSLFKQERYEEALEYFLKLEKLNYADEWLYQKVGICYKNLGKNEEALEYYLKAVELDEEDTYSMSDIAWLYNVLGKYEEGLKYLEKLEELGQDDAWTNGEFGYCLSRLERHEEAIKKLNHALEVEDEEKDIAHIHSLLGWSYRQLEDYDKALEHYIQSKEGRDSAWINNEIGYCYKKKSDLKKALEFYLLAEKYDKNDMDLISEIAWLYCVSGEYKEGLKYIKRAVELGRNDAWINIQYGGCLAGLNRCEEAIEKLEYALSFDEEKDLAFTYSQLGWCYRLLGDYEKALGYHIKSQEEGRNDAWINFEIAICYENLNDYEKALEYALISYELDKDEVNVLSEIGWLYNYMGKYEDALPFLLKAQELGRNDEGINTEIAVSLGRSGNVKEAIEKLKKSLTMVDEDNISQKIFINSELAWLYGKLEEPQPEEALKYLNIAKDLGRDDEWIHSQIGYQLGYDLEKSEEALKHFEKAIELGRDDAWIFEVKGIILLDLKRYEEALESFKKAYARDNNGWYLYSMGRCLRGLERYEEAIKILLESRQISLDEEDIVDGEDFELAHCYIGIGDKENAQKYLDSARDAIIERGILNDYYKEKIEEIEKGISSLDILFN
>NZ_CP024703.1|WP_099992816.1|1146612_1149018_-|tetratricopeptide-repeat-protein
MKKELLEKIEKLHELEKYQEIIDTIEALPAEQLNTELIGQLARAYNNVENYAKGLELLKTIEFEEGHSLIWNWRAGYSYFFLDDFVNAEKCFLKAYELDSDDNDTSDFLITIYRNLAKLENKNGNSEKAIEYALESKKYVYDEEGRIEADFFLAWLYDRYGKYTEAEEILRNQLAENKEDEWTLSELAYCLSAQGKCEEALEYFSALEKLSKADAWTYRQIGICYKNLDNREDALKYYLKAVELDEEDTYSLSEIAWLYDSFGKYEEALKYLERLEELGQDDSWTNTEFGFCLSRLKRYEEALEKINRALEADEEDKDMSYIYSQLGFCKKQLEEYDEAIEAFTQAKKWGRNDAWINVELGNCYRLKDDIKKALECNLQAEKFDKKDPYIVSDIAWFYDSLGQYDEGLKYIKKAMKLGRNDSWINVEYGACLAGLEKYEEAIEKFDYALSLKDEEKDLAFIYGQLGWCYHQLENYEKALEYQLKAKEEGRNDSWTNIEIAICYENLDNYEKALDYALIAYDLDRDNIRILSEVAWIYDCMDNYEEGLPFLLRAEELGRDDEWIKTEIAMNLGRSGKLNEGIEKLKESLTMVDEADINRKILINSELGWYYGKLEEPQPEEALKYLNIAKDLGRDDEWIHSEIGYQLGYNPEARKESLEHFDRAIELGRNDAWIFEVRGAVLLDLKRYQEALDSFKNAYDLNNDGWYLYCMGRCLRGLERYEEAIEVLLKSRQISLDEEDVVDGEDFELASCYVGIGDKENAQKYLDSARDSITERGLLNDYMKEKIEEIEKEISSLDTLFN
>NZ_CP024703.1|WP_099992818.1|1149504_1150359_+|radical-SAM-protein
MYKHVFGPVPSRRLGISLGVDLVVSKSCNLNCIFCECGATKKIQLERQRFKDMNEILEEISTVLKDIQPDYITFSGSGEPTLSLDLGNISRAIKEDLKYQGKICLITNSLLLADENLMKELEYIDLIVPTLNTLTQDIFEKIVRPDYRTSVEEIRKGFINLNKSNYKGKIWIEIFILENINDNDKNFVDIANFLKSENIRYDKIQLNTIDRVGAERDLKAISFEKISRAKKILEENGLNNIEIIKSLGELEEDKKIQVNQELLDNMKQKRLYQEEEINKIFKKN
>NZ_CP024703.1|WP_099992820.1|1150785_1151745_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MAMEKIFEYARKNNISDIHIIEGERIYFRKDGEIVAYEDSQSLSREDILKICSGKFEEDFAYTDSKNQRYRINSFFTKGKLALVIRVINDEAIKLKGAFINKVIDEKILSLKDGLVLISGITGSGKSTTLANIIEKFNENKSIKILTIEDPIEYIFENKKALIIQRELGTDVDTFEKALKSSLRQDPDVIVLGEIRDEESLFSALKLAEIGHLVFSTLHTMNAVESINRLISMTKSDKRDFVREQLASVLRFVFSQELYRDKKTKEVKAIFEILNNTKAVANLIANNKLNQIPSLIESGIENYMITKEKYFKKIEIESD
>NZ_CP024703.1|WP_099992822.1|1152407_1153511_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MEKAYKFRFYPTKTQITILNCTFGCVRYVYNHFLGLKQELYNEEKKSMSYSQCSKALTALKQEKEWLKDVDKFSLQNSLKDLDKAYKNFFSGKGYPKFKSKKDNRKSYRTNYTNNNIEFLDKWIKVPKLGKLKIRDKMKPQGRIISATITQAPSGKYYISLCCTDVEVEKLESTNKNVGIDLGIKNFALTSDEISIENPKYLQKSLNKLAILQRKLSRKSKGSSNRNKARIKVARLFEKISNQREDFLQKLSTMLIKEYDIICIEDLQVKNMVKNHKLARNIVDVSWSEFNRILSYKAKWYGRTIVRVDKFFASSQICNCCGYRNEEVKDLSIREWTCPVCGAVHNRDINAAKNILKEGLRILGISA

Crispr_ID: NZ_CP024703_4

• CRISPR_ID: NZ_CP024703_4
• CRISPR_location: 2153036-2157974
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 65 spacers
• Cas_protein_info: cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

Consensus repeat of NZ_CP024703_4

Consensus_repeat	Method
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	PILER-CR
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CRISPRCasFinder
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CRT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	PILER-CR

spacers of NZ_CP024703_4

>4.1|2153072|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
ATATTGTTCAATTTTTGAATTATATGTCATATTTTC
>4.2|2153144|37|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAA
>4.3|2153217|43|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGC
>4.4|2153296|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTATCATCTGTATATTCATTTGTAAAAGCTACAATAAC
>4.5|2153370|42|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTT
>4.6|2153448|41|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
AAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTT
>4.7|2153525|39|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TATGAAGAAGACGAACTTTATAACTATTATTTTGAAATA
>4.8|2153600|37|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TCTAAACCACCTAAACCATTAATTTTAAACTCTTTTT
>4.9|2153673|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TCTATTAATTCTTCTAAACTATAGTATACATCTGCTAT
>4.10|2153747|40|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAA
>4.11|2153823|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TATACTACAATGGCTATGCTAATGTATATCATTTATAC
>4.12|2153897|40|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
CAAATTAATGTATCATAGCTATATAACACTTTGTAAATAC
>4.13|2153973|42|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGT
>4.14|2154051|37|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGA
>4.15|2154124|42|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAA
>4.16|2154202|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
ATACATCGATATAGATGTAAAAAATGAAATTGTTATAA
>4.17|2154276|42|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
AAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATA
>4.18|2154354|40|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTTCTATATCACTCACTGCTGCATTAATTTTATCCATTAT
>4.19|2154430|37|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TCGTATTCAAATTCTACACCTTTGATAATGTATGTTT
>4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
CATTATAATTTGTAAGAATGTTATTTTCATTTTAAA
>4.21|2154575|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TAGATATAAATGCTATTGTATCACTTTACAAGCCACGA
>4.22|2154649|40|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAG
>4.23|2154725|40|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
CCTATAAATATATACTTTCGTTATTGGCTATATCAAATAT
>4.24|2154801|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
>4.25|2154873|43|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAA
>4.26|2154952|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAA
>4.27|2155026|40|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
AATAGCAATGCTTAAATATATCATTTATACATCACCTATC
>4.28|2155102|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT
TAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTT
>4.29|2155176|44|NZ_CP024703|CRISPRCasFinder,CRT
GTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTA
>4.30|2155256|36|NZ_CP024703|CRISPRCasFinder,CRT
AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
>4.31|2155328|44|NZ_CP024703|CRISPRCasFinder,CRT
TTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGC
>4.32|2155408|39|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TGATTTATAACATACATAACCAATTGCCATTATTCCTAA
>4.33|2155483|43|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
GGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTA
>4.34|2155562|41|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTT
>4.35|2155639|40|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTA
>4.36|2155715|40|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCA
>4.37|2155791|41|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAG
>4.38|2155868|43|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTC
>4.39|2155947|38|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CTGCTAATGTAACATGATTAATACTTGTAATATCCTTA
>4.40|2156021|40|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTA
>4.41|2156097|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CTATTACAATAGATAGCATTGTCAAATGTAATATTAT
>4.42|2156170|42|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTT
>4.43|2156248|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TCTGTATAAAAATATCCGTCCATTTCATATTTATCAG
>4.44|2156321|41|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGC
>4.45|2156398|39|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGC
>4.46|2156473|35|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TTAAATTTCTTTTTTATCTAATAAAACGGCTTTAA
>4.47|2156544|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
>4.48|2156617|40|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGA
>4.49|2156693|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
>4.50|2156766|39|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTA
>4.51|2156841|36|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
ATAATATCTACCTACTTTCTTTGCATACGATTTAAA
>4.52|2156913|41|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATA
>4.53|2156990|40|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTAT
>4.54|2157066|41|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
AATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCT
>4.55|2157143|43|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
GAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAA
>4.56|2157222|39|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAGACAAATATTCGTCTAACATATAATCATCGTAATAAT
>4.57|2157297|38|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
AAGATTTTATCAAAAATTTATATCTCCATTATTCCCAG
>4.58|2157371|42|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
>4.59|2157449|42|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
>4.60|2157527|40|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
GCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTC
>4.61|2157603|39|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAA
>4.62|2157678|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TCACAGGTTAATGTTTCAAACCTTATTATAATTGGAT
>4.63|2157751|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
CTATTTATAGTATCTATATTCAAATTTGATTTTTCTT
>4.64|2157824|37|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR
TTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTC
>4.65|2157897|41|NZ_CP024703|CRISPRCasFinder,CRT
CCAATGATATACTTATATTCGTATATCAAGTTTGATGCCTC

CRISPR arrays and Neighbor proteins around NZ_CP024703_4

CRISPR arrays

The CRISPR arrays of NZ_CP024703_4

>merge|NZ_CP024703|4|2153036-2157974|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAATATATTGTTCAATTTTTGAATTATATGTCATATTTTCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTATCATCTGTATATTCATTTGTAAAAGCTACAATAACATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTATGAAGAAGACGAACTTTATAACTATTATTTTGAAATAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCTAAACCACCTAAACCATTAATTTTAAACTCTTTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCTATTAATTCTTCTAAACTATAGTATACATCTGCTATATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTATACTACAATGGCTATGCTAATGTATATCATTTATACATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCAAATTAATGTATCATAGCTATATAACACTTTGTAAATACATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATATACATCGATATAGATGTAAAAAATGAAATTGTTATAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTCTATATCACTCACTGCTGCATTAATTTTATCCATTATATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCGTATTCAAATTCTACACCTTTGATAATGTATGTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCATTATAATTTGTAAGAATGTTATTTTCATTTTAAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAGATATAAATGCTATTGTATCACTTTACAAGCCACGAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAGATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCCTATAAATATATACTTTCGTTATTGGCTATATCAAATATATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAATAGCAATGCTTAAATATATCATTTATACATCACCTATCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATGTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTGATTTATAACATACATAACCAATTGCCATTATTCCTAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATGGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAGATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCTGCTAATGTAACATGATTAATACTTGTAATATCCTTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCTATTACAATAGATAGCATTGTCAAATGTAATATTATATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCTGTATAAAAATATCCGTCCATTTCATATTTATCAGATAAGAATGAATGATACTCCGTAAGGAGATGGAAATTAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTAAATTTCTTTTTTATCTAATAAAACGGCTTTAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAAAATAGTATCTATTTCAATATTTAAGATACCATTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAAAATAGTATCTATTTCAATATTTAAGATACCATTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATATAATATCTACCTACTTTCTTTGCATACGATTTAAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTATATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATGAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAGACAAATATTCGTCTAACATATAATCATCGTAATAATATAAGAATAAATGATACTCCGTAAGGAGACGGAAATAAGATTTTATCAAAAATTTATATCTCCATTATTCCCAGATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATGCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTCACAGGTTAATGTTTCAAACCTTATTATAATTGGATATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCTATTTATAGTATCTATATTCAAATTTGATTTTTCTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTCATAAGAATGAATGATACTCCGTAAGGAGACGGAAATCCAATGATATACTTATATTCGTATATCAAGTTTGATGCCTCATAAGAATGAATGATACTCCGTAAGGAGACGGTATTG

>NZ_CP024703|4|2|2153036-2155175|PILER-CR
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATATTGTTCAATTTTTGAATTATATGTCATATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCATCTGTATATTCATTTGTAAAAGCTACAATAAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATGAAGAAGACGAACTTTATAACTATTATTTTGAAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTAAACCACCTAAACCATTAATTTTAAACTCTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTATTAATTCTTCTAAACTATAGTATACATCTGCTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATACTACAATGGCTATGCTAATGTATATCATTTATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAATTAATGTATCATAGCTATATAACACTTTGTAAATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATACATCGATATAGATGTAAAAAATGAAATTGTTATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTATATCACTCACTGCTGCATTAATTTTATCCATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCGTATTCAAATTCTACACCTTTGATAATGTATGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CATTATAATTTGTAAGAATGTTATTTTCATTTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATAAATGCTATTGTATCACTTTACAAGCCACGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCTATAAATATATACTTTCGTTATTGGCTATATCAAATAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATAGCAATGCTTAAATATATCATTTATACATCACCTATC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAATGTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGCATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGATTTATAACATACATAACCAATTGCCATTATTCCTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGCTAATGTAACATGATTAATACTTGTAATATCCTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTACAATAGATAGCATTGTCAAATGTAATATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTGTATAAAAATATCCGTCCATTTCATATTTATCAG
ATAAGAATGAATGATACTCCGTAAGGAGATGGAAAT	TAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTAAATTTCTTTTTTATCTAATAAAACGGCTTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATAATATCTACCTACTTTCTTTGCATACGATTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGACAAATATTCGTCTAACATATAATCATCGTAATAAT
ATAAGAATAAATGATACTCCGTAAGGAGACGGAAAT	AAGATTTTATCAAAAATTTATATCTCCATTATTCCCAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCACAGGTTAATGTTTCAAACCTTATTATAATTGGAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTTATAGTATCTATATTCAAATTTGATTTTTCTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTC


>NZ_CP024703|4|3|2153036-2157974|CRISPRCasFinder
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATATTGTTCAATTTTTGAATTATATGTCATATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCATCTGTATATTCATTTGTAAAAGCTACAATAAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATGAAGAAGACGAACTTTATAACTATTATTTTGAAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTAAACCACCTAAACCATTAATTTTAAACTCTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTATTAATTCTTCTAAACTATAGTATACATCTGCTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATACTACAATGGCTATGCTAATGTATATCATTTATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAATTAATGTATCATAGCTATATAACACTTTGTAAATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATACATCGATATAGATGTAAAAAATGAAATTGTTATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTATATCACTCACTGCTGCATTAATTTTATCCATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCGTATTCAAATTCTACACCTTTGATAATGTATGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CATTATAATTTGTAAGAATGTTATTTTCATTTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATAAATGCTATTGTATCACTTTACAAGCCACGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCTATAAATATATACTTTCGTTATTGGCTATATCAAATAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATAGCAATGCTTAAATATATCATTTATACATCACCTATC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGATTTATAACATACATAACCAATTGCCATTATTCCTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGCTAATGTAACATGATTAATACTTGTAATATCCTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTACAATAGATAGCATTGTCAAATGTAATATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTGTATAAAAATATCCGTCCATTTCATATTTATCAG
ATAAGAATGAATGATACTCCGTAAGGAGATGGAAAT	TAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTAAATTTCTTTTTTATCTAATAAAACGGCTTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATAATATCTACCTACTTTCTTTGCATACGATTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGACAAATATTCGTCTAACATATAATCATCGTAATAAT
ATAAGAATAAATGATACTCCGTAAGGAGACGGAAAT	AAGATTTTATCAAAAATTTATATCTCCATTATTCCCAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCACAGGTTAATGTTTCAAACCTTATTATAATTGGAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTTATAGTATCTATATTCAAATTTGATTTTTCTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCAATGATATACTTATATTCGTATATCAAGTTTGATGCCTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGTATTG

>NZ_CP024703|4|1|2153036-2157973|CRT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATATTGTTCAATTTTTGAATTATATGTCATATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCATCTGTATATTCATTTGTAAAAGCTACAATAAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATGAAGAAGACGAACTTTATAACTATTATTTTGAAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTAAACCACCTAAACCATTAATTTTAAACTCTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTATTAATTCTTCTAAACTATAGTATACATCTGCTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATACTACAATGGCTATGCTAATGTATATCATTTATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAATTAATGTATCATAGCTATATAACACTTTGTAAATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATACATCGATATAGATGTAAAAAATGAAATTGTTATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTATATCACTCACTGCTGCATTAATTTTATCCATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCGTATTCAAATTCTACACCTTTGATAATGTATGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CATTATAATTTGTAAGAATGTTATTTTCATTTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATAAATGCTATTGTATCACTTTACAAGCCACGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCTATAAATATATACTTTCGTTATTGGCTATATCAAATAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATAGCAATGCTTAAATATATCATTTATACATCACCTATC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGATTTATAACATACATAACCAATTGCCATTATTCCTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGCTAATGTAACATGATTAATACTTGTAATATCCTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTACAATAGATAGCATTGTCAAATGTAATATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTGTATAAAAATATCCGTCCATTTCATATTTATCAG
ATAAGAATGAATGATACTCCGTAAGGAGATGGAAAT	TAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTAAATTTCTTTTTTATCTAATAAAACGGCTTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATAATATCTACCTACTTTCTTTGCATACGATTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGACAAATATTCGTCTAACATATAATCATCGTAATAAT
ATAAGAATAAATGATACTCCGTAAGGAGACGGAAAT	AAGATTTTATCAAAAATTTATATCTCCATTATTCCCAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCACAGGTTAATGTTTCAAACCTTATTATAATTGGAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTTATAGTATCTATATTCAAATTTGATTTTTCTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCAATGATATACTTATATTCGTATATCAAGTTTGATGCCTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGTATT

>NZ_CP024703|4|3|2155372-2157896|PILER-CR
	ATATTGTTCAATTTTTGAATTATATGTCATATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCATCTGTATATTCATTTGTAAAAGCTACAATAAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATGAAGAAGACGAACTTTATAACTATTATTTTGAAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTAAACCACCTAAACCATTAATTTTAAACTCTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTATTAATTCTTCTAAACTATAGTATACATCTGCTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATACTACAATGGCTATGCTAATGTATATCATTTATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAATTAATGTATCATAGCTATATAACACTTTGTAAATAC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATACATCGATATAGATGTAAAAAATGAAATTGTTATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTATATCACTCACTGCTGCATTAATTTTATCCATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCGTATTCAAATTCTACACCTTTGATAATGTATGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CATTATAATTTGTAAGAATGTTATTTTCATTTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATAAATGCTATTGTATCACTTTACAAGCCACGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCTATAAATATATACTTTCGTTATTGGCTATATCAAATAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATAGCAATGCTTAAATATATCATTTATACATCACCTATC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAATGTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTAATAAGAATGAATGATACTCCGTAAGGAGACGGAAATAAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTTATAAGAATGAATGATACTCCGTAAGGAGACGGAAATTTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGCATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TGATTTATAACATACATAACCAATTGCCATTATTCCTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTGCTAATGTAACATGATTAATACTTGTAATATCCTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTACAATAGATAGCATTGTCAAATGTAATATTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCTGTATAAAAATATCCGTCCATTTCATATTTATCAG
ATAAGAATGAATGATACTCCGTAAGGAGATGGAAAT	TAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTAAATTTCTTTTTTATCTAATAAAACGGCTTTAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGTATCTATTTCAATATTTAAGATACCATTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	ATAATATCTACCTACTTTCTTTGCATACGATTTAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	AATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAGACAAATATTCGTCTAACATATAATCATCGTAATAAT
ATAAGAATAAATGATACTCCGTAAGGAGACGGAAAT	AAGATTTTATCAAAAATTTATATCTCCATTATTCCCAG
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	GCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAA
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TCACAGGTTAATGTTTCAAACCTTATTATAATTGGAT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CTATTTATAGTATCTATATTCAAATTTGATTTTTCTT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	TTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTC
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl|CDD|187794
NZ_CP024703.1|WP_099971097.1|2162434_2163454_+|site-2-protease-family-protein	unknown	unknown	gnl|CDD|308008
NZ_CP024703.1|WP_099971100.1|2159654_2160536_+|phosphatidate-cytidylyltransferase	unknown	unknown	gnl|CDD|366491
NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP024703.1|WP_147386553.1|2160553_2161717_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl|CDD|235472
NZ_CP024703.1|WP_099971098.1|2161704_2162379_+|thymidylate-kinase	unknown	unknown	gnl|CDD|223203
NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl|CDD|367635
NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274212
NZ_CP024703.1|WP_099971096.1|2163543_2164929_+|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225114
NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|187783
NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	gnl|CDD|312974
NZ_CP024703.1|WP_099993698.1|2164953_2166657_+|SurA-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|372652
NZ_CP024703.1|WP_099993910.1|2142337_2143054_-|YARHG-domain-containing-protein	unknown	unknown	gnl|CDD|372555
NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_CP024703.1|WP_099971101.1|2158969_2159662_+|isoprenyl-transferase	unknown	unknown	gnl|CDD|376506
NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
NZ_CP024703.1|WP_099985101.1|2166715_2168527_+|DNA-primase	unknown	unknown	gnl|CDD|235551
NZ_CP024703.1|WP_099990364.1|2170009_2170834_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|223642
NZ_CP024703.1|WP_099993700.1|2168557_2169994_+|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|235640

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	3.6e-42	139.4	15.1
NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	3e-16	54.9	2.5
NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	4.9e-20	66.3	1.6
NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	3.1e-18	61.3	22.4
NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	2.4e-19	64.8	0.0
NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	1.2e-205	679.5	30.1
NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	3.4e-99	326.5	3.1
NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	3.9e-70	230.7	0.7
NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	1.3e-25	84.7	29.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.06588e-30
NZ_CP024703.1|WP_099971097.1|2162434_2163454_+|site-2-protease-family-protein	gnl|CDD|308008	pfam02163, Peptidase_M50, Peptidase family M50.	2.79457e-54
NZ_CP024703.1|WP_099971100.1|2159654_2160536_+|phosphatidate-cytidylyltransferase	gnl|CDD|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	3.79685e-38
NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.91175e-16
NZ_CP024703.1|WP_147386553.1|2160553_2161717_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl|CDD|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP024703.1|WP_099971098.1|2161704_2162379_+|thymidylate-kinase	gnl|CDD|223203	COG0125, Tmk, Thymidylate kinase [Nucleotide transport and metabolism].	2.38461e-40
NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	3.47698e-12
NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.23888e-119
NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	2.11904e-78
NZ_CP024703.1|WP_099971096.1|2163543_2164929_+|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl|CDD|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	5.2901e-153
NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	7.88677e-05
NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein	gnl|CDD|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.71763e-27
NZ_CP024703.1|WP_099993698.1|2164953_2166657_+|SurA-N-terminal-domain-containing-protein	gnl|CDD|372652	pfam13624, SurA_N_3, SurA N-terminal domain. This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.	3.71226e-10
NZ_CP024703.1|WP_099993910.1|2142337_2143054_-|YARHG-domain-containing-protein	gnl|CDD|372555	pfam13308, YARHG, YARHG domain. This presumed extracellular domain is about 70 amino acids in length. It is named YARHG after a conserved motif in the sequence. This domain is associated with peptidases and bacterial kinase proteins. Its molecular function is unknown.	2.26003e-19
NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.0084e-09
NZ_CP024703.1|WP_099971101.1|2158969_2159662_+|isoprenyl-transferase	gnl|CDD|376506	pfam01255, Prenyltransf, Putative undecaprenyl diphosphate synthase. Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.	6.18144e-134
NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP024703.1|WP_099985101.1|2166715_2168527_+|DNA-primase	gnl|CDD|235551	PRK05667, dnaG, DNA primase; Validated.	5.89003e-157
NZ_CP024703.1|WP_099990364.1|2170009_2170834_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	1.25822e-36
NZ_CP024703.1|WP_099993700.1|2168557_2169994_+|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	6.62467e-149

Protein sequences

>NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2
MEKWDFLDEDFEKEIFEDNFTVIVIYDIISNKRRIQLSKLLSAFGFRIQRSAFECLLTREKYKLLVEKINRYAKAEDLIRIYRLNQNVVTEIYGEKLEAENENKAYYFF
>NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1
MSNLYIYEQGIVLRYKENRLLITYTNDDSKSIPIENIDNIVIFGGIQLSTTCMHNLLAKGIHVTFLSKNGSYFGRLESTSNINIDRQREQFRKSDDKEFCLEIAKKFIKGKATNQRTVLIRANKELKNDILSSTITTMFGIIKDINDAKTIEELMGIEGYLAKIYFNALNQIIDKKYSFKTRTKRPPKDPFNAVISFGYTLLHYEIFTILVTKGLNPYAAFLHSDRHKHPALCSDLMEEWRAILVDSLAIALLNNNKITYEDFDFDEKTGGVFLNKKACEKFVEQFEKRLRQEVSYIKEVMYKMSFRRIIEYQVMLLIKALEANDADIYTPVLIR
>NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein
MSKKILLTFAGNTDPTRGQHDGPIIHICRYYKPDKIYLILTKEMEERDEAPYNIYERAIKENLKNYNPEIIRIKTGIKDAHHFDIYFDTIYQTFERIKKEEKVAEVYLNMTSGTSQITTNLLMYYIDSVDLKLIPIQVETFTGQSNKTEADNKTVDKYYAVEEEAICNLDNEENSKKRIVVPDLKKYSRILTKNQIEKLLEQYKYEAISELLKRDIFDKNLELNTLVNFAIERTNLKGLECNKKLNSLNNKDYNRLYYFTKDKNITRIPSWYQIVDCFALANIKQKAEDISSYTLMLEPIIVKLYLSILQDIMKKNLDELFRKDSYGYKIELKRLEEDLKEMIKEDLKREYLKDDVYISAQTLTSTIKYYLKKEKKLASIMNIDYFISLAETLAKMKNVRNTLAHELKSISREDFNKESGTTIEQINSKILDFFNKFYTPLGYKKEMVEVYDNINKEIVKLLK
>NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLAQINMELEAKELNANMASLFHGYLMENIDPAYAEYFHYNTTNPFTSCIFKDTKEDKFFWRVTTFSQKAYDMLMSYFSKGIPEKIYLKNKDLEINVKSFSIQKKSYEDLFLEATERKRIRLISPTSFKSNGITHIFPNISILISGVIAKINQHSETAELEDKKIVDELLEKVYIKDYNLRTKIFHLEGIKIKGFIGTMDLGIKGEDRTLANILNFLILISEYTGFGIKTSLGMGGVEVE
>NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MSNILKNKMKLEVLTPLHIGGADYKSKLDKKEYIFDKDKKTLTLIDNEKFIGFLIKKNLFEKYIAYIENNVNAKVMIQNRNINLLNFLKANNIDKDIQDFRKKAPIKLDMNIENMNDIKLMLRDVQGKPYIPGTSIKGALINLLLVDYIIKNREEFFKEKRIILSECKKANDDRSIKGLKNEIKKIVNQIEKSIVYGDNKELEKSKRFGISVSDSYSYSNTRTNFYQDIDEKRTTKVGEDKTKSMPVAREYIIANSIFDFDITLDVDLLKESKLKIRNIDNLISSLENAMSYLIDVLGDKNSPRTENLVLGANTGFLQKTIVYALFEDDKERLEVVKKMVHKNQRNAIGNHLNDKFSPRVLNRIKINNKNQLAGLVKIMKVDEKNVGTN
>NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MSYLLYKLRFPNGIHIGTASGNTLEETMMSVYSDTFYSAIYNEYMKIYNDDELYKISETGEFLISDLLPFKEKEDISTDFYLPKPFISVQRDETIKEKNDEEVIDRKKVKATNFIPADKLGEYFSFLKTGKNFPEIDDDFGKKELYTKNKVSLKNEDTKLYNIEVFKFNEKSGLYFIVRLPENNEWQEIFENILESLSLTGIGGKRNSGFGQFTSEDPMFFDGEDFDAIESESDAYINRALYSDEKNFLSISSYSPKMKEIEKIKESENYYQLIKRSGFVNSSLYSEQAEKRKQVYMLSSGSVLSFKPEGKILDLKLHGKHSIYRMGKPIILGVKI
>NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYTLKGKLLIKGTIKLITGLHIGTSGDFSAIGAVDTIVIRDSVTNKPMIPGSSLKGKMRYLLARTKYHSSLELENIKKEDICIKRLFGSSEPIITSRLQFQDVLLSNKSIEEFKEYEFDLPHTEIKYENTIDRTTGIANPRQLERVPAGSEFDFQIVYNVENPKEVKEDMENILLMMDVLEDDYLGGHGTRGYGRIKFKNLSLELKTYTEENKKELATVEKEIEKIRKELESKVE
>NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2
MNNINVQEKIEKYQEDKRNTVTTTQLRLLLSNAVIIKNKIQVETRTKKGDEISEKLENEIKYLLVKHIYQCGREPKVKKFDNEFHISEKIKGIGKSAKKFNEFYRYLEEIVAYMKYYE
>NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MDEKLICLQLGALLHDIGKIVRRAGLDKNEHSIAGSNYLKENNLLVEKYKEVYDVINYHHAKYLSSAKLKDDSLAYIVYEADNIASGIDRVKYEDKGTKGNEMDNLNSIFNVVKVEKNNIKKTFKLFDFDKNNFNMPTSHDIKLTNSDYKRVLDYIKNNLSSFKENINPEKLAVVLEACCTYFPSSSYVDTPDVSYYDHVKLTAAVAACFYLYDKEKEIKDYKKEYFSKADRNTKKFLLVSGEFSGIQNFIYTISSKMAMKSLRGRSFYLELFAEHIIDEILSELELSRVNLLYSGGSHFYLLLPNTEKSKEVLEQYKEKINSFILEKIGPIIYFEMVYTETSAEELGNGLSKDVKDENKIGELFKKTSAKVSKEKLNRYSLDQLKELLDEDSSINEIKSYTKECNICKKAEDEKILENNAKHFGDEDGIELCDSCKGYINLGKDISKLYHTNDKFVIEKDCEKFEKGVIFPKYLEGYISILINDKNYILKNMDKIHRYYAINSNYTGDKLCKNIWVGNYNITVKDESGKENLIEFKNLVKKSKGIERLAVFRADVDNLGTLFQSGFENKDSKEPYKNVTLSKSVVLSRYLSDFFKRKINLILEKKDAIKDTNELFKKYCDIICEDNSNPRDIVIVYSGGDDVFAIGTWNDIIEFSVDLRTAFKEFTNDKITLSAGIGFFYENYPIHQMAEKTGNLESLAKANKDSNGKIIKNSVALFGEISPELNHIYNWDIFINKVLNEKYKFIKDVTILNEETKEKYKDRIVIGRSKWYKLMDLIVSRLTRNDNKLDIARFAYVLGRINHTTNNKENYDKFKKNLLLWLKNKEDAKQVLTAINILIYQERGE
>NZ_CP024703.1|WP_099993910.1|2142337_2143054_-|YARHG-domain-containing-protein
MPKVDYSKPETTTTENKTDIKENNETKEPKETKKVAMSNLGQNLNNNGKANSKIKFIIIGAVILLLCVLVAFFVTQKLKTSHDEALEAIKGEALKIETTVGEPVTTTEVAPVVETAPVETTTVENITETTNNVVPQQNTVAQAPRPEETVEDEYDLILLDMVYDEVINNRNEAYLNNFSSEELALIRNTLYARRGYRFKKKKYQEYFGSKPWYTPTTDSQNILPKNEERLANIIKKYE
>NZ_CP024703.1|WP_099971101.1|2158969_2159662_+|isoprenyl-transferase
MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFSTENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETKNNDKITLNIAFNYGSRAEIIDAVNDIIKDGKENISEEDFSKYLYNDFPDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGVKNV
>NZ_CP024703.1|WP_099971100.1|2159654_2160536_+|phosphatidate-cytidylyltransferase
MFKWNRVLVALIGVPLLFFVYMGEAFFRMNLQGLPMLIFTNLVVAIGTYEFYKMVKISGKEVYDKFGILVSIIIPNLIYLANRSKYLDQSMVGLVIIIATMALLIYRVFKNQVKGTLEKVSFTILGIVYVSVFFSQIINLYFLGAIFPFVLQVLVWISDTAAGIVGVTIGRKFFKNGFTEISPKKSVEGALGSIIFTAIAFVGIVSYFENIKELSLETGIVAFLIGAFISVIAQIGDLIESLFKRECGVKDSGTILMGHGGVLDRFDSMILVLPFVTVVIYFFHLCISYKYGI
>NZ_CP024703.1|WP_147386553.1|2160553_2161717_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MKKILILGSTGSIGTSALELIRNNREEYKVVAISANRNIELLKKQIEEFKPLAIYVGAEEEAIKIKNEYSYIKNAYFGENGLAELAKNSDYDIILTAVSGAIGIDATVEAIKREKRIALANKETMVSAGTYINRLLKEYPKAEIIPVDSEHSALFQSLQGFKKENVKKLIITASGGTFRGKTLEFLENVTVEEALKHPNWSMGKKITIDSSTLVNKGLEVIEAHELFNMDYDDIEVVVHPQSIIHSMVEYVDGSIIAQMGVPSMKTPILYAFSYPEKEFNNSIDFLDLIKAKTLTFEEADRKVFKGIDLAYRAGRTGETMPTVFNAANEVAVELFMRKKIKFLDIYRIIEEAMDNHKLMSLDTDEALSIIKEVDRETRRKVREQWEK
>NZ_CP024703.1|WP_099971098.1|2161704_2162379_+|thymidylate-kinase
MGKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTDATKVNPYPVSTMYAIDRYASFKQDWEKFYLDNYLIITDRYVTSNMIHQASKIKDIEAKDEYLNWLVDLEYKKNEIPEPDIVIFLKMPTDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKSYDNATAISKKYSWCEIECVEDNKIKSIERINDEIFSKIEELIK
>NZ_CP024703.1|WP_099971097.1|2162434_2163454_+|site-2-protease-family-protein
MTFLIAVAMLGLIIFVHELGHFLTAKFFKMPVSEFSIGMGPQVFSLDTKETTYSFRAIPIGGYVNIEGMEVGSQVENGFNSKPAYQRFIVLFAGVFMNFLTAFLIIFSIAQMSGRMEYEEKAIIGALVKGGANEQVLKVDDKILELDGKKITLWADIPEVTKEALDKKEISAVIERDGKEQKLVLKLTKDEENNRVVLGISPKSKKTNLSFSESLIFAKNSFISILKDTVGGLFTLFSGKADLKEISGPVGILKVVGEVSKFGWTSIASLAVILSINIGVLNLLPIPALDGGRIIFVLLELFRIKVNKKWEENLHKFGMVVLLFFIVMISVNDVWKLFN
>NZ_CP024703.1|WP_099971096.1|2163543_2164929_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MKNAILAISEKKEILKQIRKELAEKYEVITFNNLLDAIDMVRESDFDLVLLDNALEGVTVGEAKKKLASIGKEFVTIALVDEVNAETTKELENFGIFAYLLKPIKVEDLDAIILPSLNGLELIKENKRLEEKLAVLEEDTDIIGQSTKIKDVRNLIEKIADNDLPVLIVGETGTGKDIIAKEIHKKSERNKGRYAQISCALYPGELIERELFGYERGAFMGANASKKGLLEEIDGGTIYIEDISKMDIKIQSRFLKAIEYGEFKRVGGTKVRKTNVRFLVGTDIDLKQETEKGKFRKDLYHRLTALTIEVPPLRERKEDIPVLANYFLNKIVRILHKETPVISGEAMKFLMEYYYPGNIMELKNLIERMALLSKDKILDVDQLPLEIKTKSDIVENKTVVGVGPLKEILEQEIYSLEEVERVVIAIALQKTRWNKQETSKILGIGRTTLYEKIRKYGLDTK
>NZ_CP024703.1|WP_099993698.1|2164953_2166657_+|SurA-N-terminal-domain-containing-protein
MSIRKFRKQMKPFIIVLTVVFILSLAYGGYESFRTSRANKKAQEAMLLNKDYIQKIDIERAKQEVSRAYAETVDKDIVDIIAFNDVIDKKLTLDLAKSLKVKVPSSEVNAQYEELESSMGDKEQFRRMLQVQGLTKDSLKNRIEENLLMQKTREEFSKNINPTDEEINAYMSLYSIPSDKKEDAISLYKMEKGEEAFKLALIKARKEMQIKDLAPEYENLVEKVSYEEDGFKVTNLDLAKIMATFMINQKATKEQAEELAKNMITKQIKVAKMAKEKGVKVNEELDLMSQLQEYTIGLSEKVREEIKPTDAELESFFNANKSRYNIPETADAKLVYIIPKFTKEDDAVAKAEAEKLLAELTPENFSEKGKKLGNNQNIKYQDLGTFGKGKMVEEFEEALNDVPSNSIVNKVIKTKFGYHVAYVKKNDNNQQWSVEHILIIPYPSDKTVEEKLAKLEKLKADIEAGTLALNDKIDEDVIQSFDAKGITPDGVIPNSSNNPEIAKAVFETPLNKVGIVTDKSLIVIPSIVVFQKTKEVKAEEANFTKLKEEVKKDYINRQVGEYMSKLF
>NZ_CP024703.1|WP_099985101.1|2166715_2168527_+|DNA-primase
MYFRNEDIEKLLDSLRIEEVVGEFVDLKKSGSSYKGLCPFHADTNPSFSVKPEKKICKCFVCGSGGNAINFYSKIKNIPYMEAVKELAQKYRVNIKEYNAKNTDIDNEKFYQIMEDSHNFFMSKIFEQESRTALNYLSNRGLDTDLIKEHRLGYAPAKWSELYDFLKEKNYSDEDLLTLGLIKQNEEGRIYDTFRNRIIFPIFSISNRIIAFGGRSLEKDDTIPKYINSPDTPIFKKGKNIYGIERASNIRNKNYSILMEGYMDVLSANIFDFDTSIAPLGTALTVEQAQLIKRYSSNILLSFDMDKAGKSATERASFILKSQGFNIRVLQFDGAKDPDEYLKKNGREAFLEVVQKSLEIFDFLYELYSSEYDLTNIIAKQNFIERFKEFFAYLTTDLEKEMYLKNLSEKIDISIDILRKTLVEENKKKFIVKDYIDEIEEKPTEKKEFKKANNLELSIVEMLLKKPEYYEFFKDEKFESDIANKTLKFFEEKIKENFNFESNNLMREFENYIRNDNESHLEYINSNIARIILNYVIDTENTIEEKEFLKLFKDYFRVKVKLRDKTEDDFQKIVYFSKFKDKIEKSKSVEEFIEIYNSFKYLF
>NZ_CP024703.1|WP_099993700.1|2168557_2169994_+|RNA-polymerase-sigma-factor-RpoD
MKEIIRTKKGREFVNEVREKKKTTYEEINKCFSKDYTEEQINEFVKIFLEEGIEVLSETETKAKSKTKTKAKTKTKSKAKAKEETEAELDKEKDLNEKEKVKIEEIEEKELDEDRELDEEKDLDDEEKELDDEESEEKELDEEYIEEESEDSLEDEDEEKEEDDIDTETFIGFEDEFNPDYIEDISEEELSNEKLLNLGNSAKVDEPIKMYLREIGQVPLLTHDEEIEYAKRAYEGDEEASQKLIESNLRLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETINKIKKESRIYLQETGKDASPEILAERLGMEVEKIKAIQEMNQEPISLETPVGSEEDSELGDFVEDQKTTSPYEATNRAILREELDGVLKTLSPREEKVLRYRYGLDDSSPKTLEEVGKIFNVTRERIRQIEVKALRKLRHPSRKKKLEDFKVD
>NZ_CP024703.1|WP_099990364.1|2170009_2170834_+|sigma-70-family-RNA-polymerase-sigma-factor
MKLFSLEKYLLKNLDMTEEDFKKLVLEVSEPLELELPEDRKLTDEEIDYEYIDLLVTETLENLKDDVCTCEKDCGVPDCCGTRVEKNLKKVYQIALYMLRDGILYQDLTQEGVIGLMKAHELFEDDKDFKLYKDYYIARAMFNYIESYANYRKTAFKEYAEYEIHKESHPKISLKDKSKSEELKKLEKENKEKHIEEMKQLEKRAEYQFDYLNLKYRLGEREIEAISLYFGLDGHKRKNFSEIQSIMKIDNDTLDKIVKDALFKLSVVDEKVEL

Crispr_ID: NZ_CP024703_5

• CRISPR_ID: NZ_CP024703_5
• CRISPR_location: 2158344-2158686
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 4 spacers
• Cas_protein_info: cas2,cas1,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

Consensus repeat of NZ_CP024703_5

Consensus_repeat	Method
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT	CRISPRCasFinder
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC	CRT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAACT	PILER-CR

spacers of NZ_CP024703_5

>5.1|2158380|43|NZ_CP024703|CRISPRCasFinder,CRT
ACACCTACCTTTCAATATATAAAATAAAAATAAATATTAACCA
>5.2|2158459|40|NZ_CP024703|CRISPRCasFinder,CRT
TCCCATAGAATTCTATCCTGTAGATCATACTTTTTAGATT
>5.3|2158535|39|NZ_CP024703|CRISPRCasFinder,CRT
TTTAAATAAGAAGTGTTATAACCAACAATGTCATTTTCT
>5.4|2158610|41|NZ_CP024703|CRISPRCasFinder,CRT
TTTTTATGAGATTCTTTATCATGAATTACTACACTATAATA
>5.5|2158460|39|NZ_CP024703|PILER-CR
CCCATAGAATTCTATCCTGTAGATCATACTTTTTAGATT
>5.6|2158536|38|NZ_CP024703|PILER-CR
TTAAATAAGAAGTGTTATAACCAACAATGTCATTTTCT

CRISPR arrays and Neighbor proteins around NZ_CP024703_5

CRISPR arrays

The CRISPR arrays of NZ_CP024703_5

>merge|NZ_CP024703|5|2158344-2158686|CRISPRCasFinder,CRT,PILER-CR
ATAAAAGTGAATATAACTTCATAAGGAGACGGAAACACACCTACCTTTCAATATATAAAATAAAAATAAATATTAACCAATAAGAATGAATGATACTCCGTAAGGAGACGAAAACTCCCATAGAATTCTATCCTGTAGATCATACTTTTTAGATTATAAGAATGAATGATACTCCGTAAGGAGACGGAAACTTTAAATAAGAAGTGTTATAACCAACAATGTCATTTTCTATAAGAATAAATGATACTCCGCAAGGAGACGGAAACTTTTTATGAGATTCTTTATCATGAATTACTACACTATAATAATAAGAATGAATGATACTCCGTAAGGAGACGGTATT

>NZ_CP024703|5|4|2158344-2158686|CRISPRCasFinder
ATAAAAGTGAATATAACTTCATAAGGAGACGGAAAC	ACACCTACCTTTCAATATATAAAATAAAAATAAATATTAACCA
ATAAGAATGAATGATACTCCGTAAGGAGACGAAAAC	TCCCATAGAATTCTATCCTGTAGATCATACTTTTTAGATT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC	TTTAAATAAGAAGTGTTATAACCAACAATGTCATTTTCT
ATAAGAATAAATGATACTCCGCAAGGAGACGGAAAC	TTTTTATGAGATTCTTTATCATGAATTACTACACTATAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGTATT

>NZ_CP024703|5|2|2158344-2158686|CRT
ATAAAAGTGAATATAACTTCATAAGGAGACGGAAAC	ACACCTACCTTTCAATATATAAAATAAAAATAAATATTAACCA
ATAAGAATGAATGATACTCCGTAAGGAGACGAAAAC	TCCCATAGAATTCTATCCTGTAGATCATACTTTTTAGATT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC	TTTAAATAAGAAGTGTTATAACCAACAATGTCATTTTCT
ATAAGAATAAATGATACTCCGCAAGGAGACGGAAAC	TTTTTATGAGATTCTTTATCATGAATTACTACACTATAATA
ATAAGAATGAATGATACTCCGTAAGGAGACGGTATT

>NZ_CP024703|5|4|2158423-2158610|PILER-CR
ATAAGAATGAATGATACTCCGTAAGGAGACGAAAACT	CCCATAGAATTCTATCCTGTAGATCATACTTTTTAGATT
ATAAGAATGAATGATACTCCGTAAGGAGACGGAAACT	TTAAATAAGAAGTGTTATAACCAACAATGTCATTTTCT
ATAAGAATAAATGATACTCCGCAAGGAGACGGAAACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl|CDD|187794
NZ_CP024703.1|WP_099971097.1|2162434_2163454_+|site-2-protease-family-protein	unknown	unknown	gnl|CDD|308008
NZ_CP024703.1|WP_099971100.1|2159654_2160536_+|phosphatidate-cytidylyltransferase	unknown	unknown	gnl|CDD|366491
NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP024703.1|WP_147386553.1|2160553_2161717_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl|CDD|235472
NZ_CP024703.1|WP_099971098.1|2161704_2162379_+|thymidylate-kinase	unknown	unknown	gnl|CDD|223203
NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	gnl|CDD|367635
NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274212
NZ_CP024703.1|WP_099971096.1|2163543_2164929_+|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225114
NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|187783
NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	gnl|CDD|312974
NZ_CP024703.1|WP_099993698.1|2164953_2166657_+|SurA-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|372652
NZ_CP024703.1|WP_099993910.1|2142337_2143054_-|YARHG-domain-containing-protein	unknown	unknown	gnl|CDD|372555
NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_CP024703.1|WP_099971101.1|2158969_2159662_+|isoprenyl-transferase	unknown	unknown	gnl|CDD|376506
NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
NZ_CP024703.1|WP_099985101.1|2166715_2168527_+|DNA-primase	unknown	unknown	gnl|CDD|235551
NZ_CP024703.1|WP_099990364.1|2170009_2170834_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|223642
NZ_CP024703.1|WP_099993700.1|2168557_2169994_+|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|235640

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	3.6e-42	139.4	15.1
NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	cd09647_csm2gr11_CAS-III-A	3e-16	54.9	2.5
NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	4.9e-20	66.3	1.6
NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	COG1332_csm5gr7_CAS-III-A	3.1e-18	61.3	22.4
NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	2.4e-19	64.8	0.0
NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	1.2e-205	679.5	30.1
NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	3.4e-99	326.5	3.1
NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	3.9e-70	230.7	0.7
NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein	csm6	pfam09659_csm6_CAS-III-A	1.3e-25	84.7	29.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.06588e-30
NZ_CP024703.1|WP_099971097.1|2162434_2163454_+|site-2-protease-family-protein	gnl|CDD|308008	pfam02163, Peptidase_M50, Peptidase family M50.	2.79457e-54
NZ_CP024703.1|WP_099971100.1|2159654_2160536_+|phosphatidate-cytidylyltransferase	gnl|CDD|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	3.79685e-38
NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.91175e-16
NZ_CP024703.1|WP_147386553.1|2160553_2161717_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl|CDD|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP024703.1|WP_099971098.1|2161704_2162379_+|thymidylate-kinase	gnl|CDD|223203	COG0125, Tmk, Thymidylate kinase [Nucleotide transport and metabolism].	2.38461e-40
NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	3.47698e-12
NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.23888e-119
NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|274212	TIGR02582, CRISPR_type_III-associated_RAMP_protein_Csm3, CRISPR type III-A/MTUBE-associated RAMP protein Csm3. Members of this CRISPR-associated (cas) gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm3, for CRISPR/cas Subtype Mtube, protein 3.	2.11904e-78
NZ_CP024703.1|WP_099971096.1|2163543_2164929_+|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl|CDD|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	5.2901e-153
NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	7.88677e-05
NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein	gnl|CDD|312974	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6). Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.71763e-27
NZ_CP024703.1|WP_099993698.1|2164953_2166657_+|SurA-N-terminal-domain-containing-protein	gnl|CDD|372652	pfam13624, SurA_N_3, SurA N-terminal domain. This domain is found at the N-terminus of the chaperone SurA. It is a helical domain of unknown function. The C-terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment.	3.71226e-10
NZ_CP024703.1|WP_099993910.1|2142337_2143054_-|YARHG-domain-containing-protein	gnl|CDD|372555	pfam13308, YARHG, YARHG domain. This presumed extracellular domain is about 70 amino acids in length. It is named YARHG after a conserved motif in the sequence. This domain is associated with peptidases and bacterial kinase proteins. Its molecular function is unknown.	2.26003e-19
NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	5.0084e-09
NZ_CP024703.1|WP_099971101.1|2158969_2159662_+|isoprenyl-transferase	gnl|CDD|376506	pfam01255, Prenyltransf, Putative undecaprenyl diphosphate synthase. Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.	6.18144e-134
NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NZ_CP024703.1|WP_099985101.1|2166715_2168527_+|DNA-primase	gnl|CDD|235551	PRK05667, dnaG, DNA primase; Validated.	5.89003e-157
NZ_CP024703.1|WP_099990364.1|2170009_2170834_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	1.25822e-36
NZ_CP024703.1|WP_099993700.1|2168557_2169994_+|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	6.62467e-149

Protein sequences

>NZ_CP024703.1|WP_099971102.1|2152457_2152787_+|CRISPR-associated-endonuclease-Cas2
MEKWDFLDEDFEKEIFEDNFTVIVIYDIISNKRRIQLSKLLSAFGFRIQRSAFECLLTREKYKLLVEKINRYAKAEDLIRIYRLNQNVVTEIYGEKLEAENENKAYYFF
>NZ_CP024703.1|WP_099971103.1|2151445_2152453_+|CRISPR-associated-endonuclease-Cas1
MSNLYIYEQGIVLRYKENRLLITYTNDDSKSIPIENIDNIVIFGGIQLSTTCMHNLLAKGIHVTFLSKNGSYFGRLESTSNINIDRQREQFRKSDDKEFCLEIAKKFIKGKATNQRTVLIRANKELKNDILSSTITTMFGIIKDINDAKTIEELMGIEGYLAKIYFNALNQIIDKKYSFKTRTKRPPKDPFNAVISFGYTLLHYEIFTILVTKGLNPYAAFLHSDRHKHPALCSDLMEEWRAILVDSLAIALLNNNKITYEDFDFDEKTGGVFLNKKACEKFVEQFEKRLRQEVSYIKEVMYKMSFRRIIEYQVMLLIKALEANDADIYTPVLIR
>NZ_CP024703.1|WP_099993696.1|2150040_2151432_+|CRISPR-associated-protein
MSKKILLTFAGNTDPTRGQHDGPIIHICRYYKPDKIYLILTKEMEERDEAPYNIYERAIKENLKNYNPEIIRIKTGIKDAHHFDIYFDTIYQTFERIKKEEKVAEVYLNMTSGTSQITTNLLMYYIDSVDLKLIPIQVETFTGQSNKTEADNKTVDKYYAVEEEAICNLDNEENSKKRIVVPDLKKYSRILTKNQIEKLLEQYKYEAISELLKRDIFDKNLELNTLVNFAIERTNLKGLECNKKLNSLNNKDYNRLYYFTKDKNITRIPSWYQIVDCFALANIKQKAEDISSYTLMLEPIIVKLYLSILQDIMKKNLDELFRKDSYGYKIELKRLEEDLKEMIKEDLKREYLKDDVYISAQTLTSTIKYYLKKEKKLASIMNIDYFISLAETLAKMKNVRNTLAHELKSISREDFNKESGTTIEQINSKILDFFNKFYTPLGYKKEMVEVYDNINKEIVKLLK
>NZ_CP024703.1|WP_099993912.1|2149325_2150048_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MLAQINMELEAKELNANMASLFHGYLMENIDPAYAEYFHYNTTNPFTSCIFKDTKEDKFFWRVTTFSQKAYDMLMSYFSKGIPEKIYLKNKDLEINVKSFSIQKKSYEDLFLEATERKRIRLISPTSFKSNGITHIFPNISILISGVIAKINQHSETAELEDKKIVDELLEKVYIKDYNLRTKIFHLEGIKIKGFIGTMDLGIKGEDRTLANILNFLILISEYTGFGIKTSLGMGGVEVE
>NZ_CP024703.1|WP_099993694.1|2148172_2149342_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MSNILKNKMKLEVLTPLHIGGADYKSKLDKKEYIFDKDKKTLTLIDNEKFIGFLIKKNLFEKYIAYIENNVNAKVMIQNRNINLLNFLKANNIDKDIQDFRKKAPIKLDMNIENMNDIKLMLRDVQGKPYIPGTSIKGALINLLLVDYIIKNREEFFKEKRIILSECKKANDDRSIKGLKNEIKKIVNQIEKSIVYGDNKELEKSKRFGISVSDSYSYSNTRTNFYQDIDEKRTTKVGEDKTKSMPVAREYIIANSIFDFDITLDVDLLKESKLKIRNIDNLISSLENAMSYLIDVLGDKNSPRTENLVLGANTGFLQKTIVYALFEDDKERLEVVKKMVHKNQRNAIGNHLNDKFSPRVLNRIKINNKNQLAGLVKIMKVDEKNVGTN
>NZ_CP024703.1|WP_099993692.1|2147165_2148176_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MSYLLYKLRFPNGIHIGTASGNTLEETMMSVYSDTFYSAIYNEYMKIYNDDELYKISETGEFLISDLLPFKEKEDISTDFYLPKPFISVQRDETIKEKNDEEVIDRKKVKATNFIPADKLGEYFSFLKTGKNFPEIDDDFGKKELYTKNKVSLKNEDTKLYNIEVFKFNEKSGLYFIVRLPENNEWQEIFENILESLSLTGIGGKRNSGFGQFTSEDPMFFDGEDFDAIESESDAYINRALYSDEKNFLSISSYSPKMKEIEKIKESENYYQLIKRSGFVNSSLYSEQAEKRKQVYMLSSGSVLSFKPEGKILDLKLHGKHSIYRMGKPIILGVKI
>NZ_CP024703.1|WP_099971107.1|2146458_2147166_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYTLKGKLLIKGTIKLITGLHIGTSGDFSAIGAVDTIVIRDSVTNKPMIPGSSLKGKMRYLLARTKYHSSLELENIKKEDICIKRLFGSSEPIITSRLQFQDVLLSNKSIEEFKEYEFDLPHTEIKYENTIDRTTGIANPRQLERVPAGSEFDFQIVYNVENPKEVKEDMENILLMMDVLEDDYLGGHGTRGYGRIKFKNLSLELKTYTEENKKELATVEKEIEKIRKELESKVE
>NZ_CP024703.1|WP_099971108.1|2146053_2146410_+|type-III-A-CRISPR-associated-protein-Csm2
MNNINVQEKIEKYQEDKRNTVTTTQLRLLLSNAVIIKNKIQVETRTKKGDEISEKLENEIKYLLVKHIYQCGREPKVKKFDNEFHISEKIKGIGKSAKKFNEFYRYLEEIVAYMKYYE
>NZ_CP024703.1|WP_099971109.1|2143512_2146050_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MDEKLICLQLGALLHDIGKIVRRAGLDKNEHSIAGSNYLKENNLLVEKYKEVYDVINYHHAKYLSSAKLKDDSLAYIVYEADNIASGIDRVKYEDKGTKGNEMDNLNSIFNVVKVEKNNIKKTFKLFDFDKNNFNMPTSHDIKLTNSDYKRVLDYIKNNLSSFKENINPEKLAVVLEACCTYFPSSSYVDTPDVSYYDHVKLTAAVAACFYLYDKEKEIKDYKKEYFSKADRNTKKFLLVSGEFSGIQNFIYTISSKMAMKSLRGRSFYLELFAEHIIDEILSELELSRVNLLYSGGSHFYLLLPNTEKSKEVLEQYKEKINSFILEKIGPIIYFEMVYTETSAEELGNGLSKDVKDENKIGELFKKTSAKVSKEKLNRYSLDQLKELLDEDSSINEIKSYTKECNICKKAEDEKILENNAKHFGDEDGIELCDSCKGYINLGKDISKLYHTNDKFVIEKDCEKFEKGVIFPKYLEGYISILINDKNYILKNMDKIHRYYAINSNYTGDKLCKNIWVGNYNITVKDESGKENLIEFKNLVKKSKGIERLAVFRADVDNLGTLFQSGFENKDSKEPYKNVTLSKSVVLSRYLSDFFKRKINLILEKKDAIKDTNELFKKYCDIICEDNSNPRDIVIVYSGGDDVFAIGTWNDIIEFSVDLRTAFKEFTNDKITLSAGIGFFYENYPIHQMAEKTGNLESLAKANKDSNGKIIKNSVALFGEISPELNHIYNWDIFINKVLNEKYKFIKDVTILNEETKEKYKDRIVIGRSKWYKLMDLIVSRLTRNDNKLDIARFAYVLGRINHTTNNKENYDKFKKNLLLWLKNKEDAKQVLTAINILIYQERGE
>NZ_CP024703.1|WP_099993910.1|2142337_2143054_-|YARHG-domain-containing-protein
MPKVDYSKPETTTTENKTDIKENNETKEPKETKKVAMSNLGQNLNNNGKANSKIKFIIIGAVILLLCVLVAFFVTQKLKTSHDEALEAIKGEALKIETTVGEPVTTTEVAPVVETAPVETTTVENITETTNNVVPQQNTVAQAPRPEETVEDEYDLILLDMVYDEVINNRNEAYLNNFSSEELALIRNTLYARRGYRFKKKKYQEYFGSKPWYTPTTDSQNILPKNEERLANIIKKYE
>NZ_CP024703.1|WP_099971101.1|2158969_2159662_+|isoprenyl-transferase
MEKNIPQHIAIIMDGNGRWAKKRGLARSFGHMEGAKSLRRALEYFTEIGVKYLTVYAFSTENWSRPKDEVSTLMKLFLKYIKSERKNMMKNKIRFFVSGRKNNIPEKLLNEIEKLKEETKNNDKITLNIAFNYGSRAEIIDAVNDIIKDGKENISEEDFSKYLYNDFPDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLWPDFDEKEIDKAIESYNQRDRRFGGVKNV
>NZ_CP024703.1|WP_099971100.1|2159654_2160536_+|phosphatidate-cytidylyltransferase
MFKWNRVLVALIGVPLLFFVYMGEAFFRMNLQGLPMLIFTNLVVAIGTYEFYKMVKISGKEVYDKFGILVSIIIPNLIYLANRSKYLDQSMVGLVIIIATMALLIYRVFKNQVKGTLEKVSFTILGIVYVSVFFSQIINLYFLGAIFPFVLQVLVWISDTAAGIVGVTIGRKFFKNGFTEISPKKSVEGALGSIIFTAIAFVGIVSYFENIKELSLETGIVAFLIGAFISVIAQIGDLIESLFKRECGVKDSGTILMGHGGVLDRFDSMILVLPFVTVVIYFFHLCISYKYGI
>NZ_CP024703.1|WP_147386553.1|2160553_2161717_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MKKILILGSTGSIGTSALELIRNNREEYKVVAISANRNIELLKKQIEEFKPLAIYVGAEEEAIKIKNEYSYIKNAYFGENGLAELAKNSDYDIILTAVSGAIGIDATVEAIKREKRIALANKETMVSAGTYINRLLKEYPKAEIIPVDSEHSALFQSLQGFKKENVKKLIITASGGTFRGKTLEFLENVTVEEALKHPNWSMGKKITIDSSTLVNKGLEVIEAHELFNMDYDDIEVVVHPQSIIHSMVEYVDGSIIAQMGVPSMKTPILYAFSYPEKEFNNSIDFLDLIKAKTLTFEEADRKVFKGIDLAYRAGRTGETMPTVFNAANEVAVELFMRKKIKFLDIYRIIEEAMDNHKLMSLDTDEALSIIKEVDRETRRKVREQWEK
>NZ_CP024703.1|WP_099971098.1|2161704_2162379_+|thymidylate-kinase
MGKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTDATKVNPYPVSTMYAIDRYASFKQDWEKFYLDNYLIITDRYVTSNMIHQASKIKDIEAKDEYLNWLVDLEYKKNEIPEPDIVIFLKMPTDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKSYDNATAISKKYSWCEIECVEDNKIKSIERINDEIFSKIEELIK
>NZ_CP024703.1|WP_099971097.1|2162434_2163454_+|site-2-protease-family-protein
MTFLIAVAMLGLIIFVHELGHFLTAKFFKMPVSEFSIGMGPQVFSLDTKETTYSFRAIPIGGYVNIEGMEVGSQVENGFNSKPAYQRFIVLFAGVFMNFLTAFLIIFSIAQMSGRMEYEEKAIIGALVKGGANEQVLKVDDKILELDGKKITLWADIPEVTKEALDKKEISAVIERDGKEQKLVLKLTKDEENNRVVLGISPKSKKTNLSFSESLIFAKNSFISILKDTVGGLFTLFSGKADLKEISGPVGILKVVGEVSKFGWTSIASLAVILSINIGVLNLLPIPALDGGRIIFVLLELFRIKVNKKWEENLHKFGMVVLLFFIVMISVNDVWKLFN
>NZ_CP024703.1|WP_099971096.1|2163543_2164929_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MKNAILAISEKKEILKQIRKELAEKYEVITFNNLLDAIDMVRESDFDLVLLDNALEGVTVGEAKKKLASIGKEFVTIALVDEVNAETTKELENFGIFAYLLKPIKVEDLDAIILPSLNGLELIKENKRLEEKLAVLEEDTDIIGQSTKIKDVRNLIEKIADNDLPVLIVGETGTGKDIIAKEIHKKSERNKGRYAQISCALYPGELIERELFGYERGAFMGANASKKGLLEEIDGGTIYIEDISKMDIKIQSRFLKAIEYGEFKRVGGTKVRKTNVRFLVGTDIDLKQETEKGKFRKDLYHRLTALTIEVPPLRERKEDIPVLANYFLNKIVRILHKETPVISGEAMKFLMEYYYPGNIMELKNLIERMALLSKDKILDVDQLPLEIKTKSDIVENKTVVGVGPLKEILEQEIYSLEEVERVVIAIALQKTRWNKQETSKILGIGRTTLYEKIRKYGLDTK
>NZ_CP024703.1|WP_099993698.1|2164953_2166657_+|SurA-N-terminal-domain-containing-protein
MSIRKFRKQMKPFIIVLTVVFILSLAYGGYESFRTSRANKKAQEAMLLNKDYIQKIDIERAKQEVSRAYAETVDKDIVDIIAFNDVIDKKLTLDLAKSLKVKVPSSEVNAQYEELESSMGDKEQFRRMLQVQGLTKDSLKNRIEENLLMQKTREEFSKNINPTDEEINAYMSLYSIPSDKKEDAISLYKMEKGEEAFKLALIKARKEMQIKDLAPEYENLVEKVSYEEDGFKVTNLDLAKIMATFMINQKATKEQAEELAKNMITKQIKVAKMAKEKGVKVNEELDLMSQLQEYTIGLSEKVREEIKPTDAELESFFNANKSRYNIPETADAKLVYIIPKFTKEDDAVAKAEAEKLLAELTPENFSEKGKKLGNNQNIKYQDLGTFGKGKMVEEFEEALNDVPSNSIVNKVIKTKFGYHVAYVKKNDNNQQWSVEHILIIPYPSDKTVEEKLAKLEKLKADIEAGTLALNDKIDEDVIQSFDAKGITPDGVIPNSSNNPEIAKAVFETPLNKVGIVTDKSLIVIPSIVVFQKTKEVKAEEANFTKLKEEVKKDYINRQVGEYMSKLF
>NZ_CP024703.1|WP_099985101.1|2166715_2168527_+|DNA-primase
MYFRNEDIEKLLDSLRIEEVVGEFVDLKKSGSSYKGLCPFHADTNPSFSVKPEKKICKCFVCGSGGNAINFYSKIKNIPYMEAVKELAQKYRVNIKEYNAKNTDIDNEKFYQIMEDSHNFFMSKIFEQESRTALNYLSNRGLDTDLIKEHRLGYAPAKWSELYDFLKEKNYSDEDLLTLGLIKQNEEGRIYDTFRNRIIFPIFSISNRIIAFGGRSLEKDDTIPKYINSPDTPIFKKGKNIYGIERASNIRNKNYSILMEGYMDVLSANIFDFDTSIAPLGTALTVEQAQLIKRYSSNILLSFDMDKAGKSATERASFILKSQGFNIRVLQFDGAKDPDEYLKKNGREAFLEVVQKSLEIFDFLYELYSSEYDLTNIIAKQNFIERFKEFFAYLTTDLEKEMYLKNLSEKIDISIDILRKTLVEENKKKFIVKDYIDEIEEKPTEKKEFKKANNLELSIVEMLLKKPEYYEFFKDEKFESDIANKTLKFFEEKIKENFNFESNNLMREFENYIRNDNESHLEYINSNIARIILNYVIDTENTIEEKEFLKLFKDYFRVKVKLRDKTEDDFQKIVYFSKFKDKIEKSKSVEEFIEIYNSFKYLF
>NZ_CP024703.1|WP_099993700.1|2168557_2169994_+|RNA-polymerase-sigma-factor-RpoD
MKEIIRTKKGREFVNEVREKKKTTYEEINKCFSKDYTEEQINEFVKIFLEEGIEVLSETETKAKSKTKTKAKTKTKSKAKAKEETEAELDKEKDLNEKEKVKIEEIEEKELDEDRELDEEKDLDDEEKELDDEESEEKELDEEYIEEESEDSLEDEDEEKEEDDIDTETFIGFEDEFNPDYIEDISEEELSNEKLLNLGNSAKVDEPIKMYLREIGQVPLLTHDEEIEYAKRAYEGDEEASQKLIESNLRLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETINKIKKESRIYLQETGKDASPEILAERLGMEVEKIKAIQEMNQEPISLETPVGSEEDSELGDFVEDQKTTSPYEATNRAILREELDGVLKTLSPREEKVLRYRYGLDDSSPKTLEEVGKIFNVTRERIRQIEVKALRKLRHPSRKKKLEDFKVD
>NZ_CP024703.1|WP_099990364.1|2170009_2170834_+|sigma-70-family-RNA-polymerase-sigma-factor
MKLFSLEKYLLKNLDMTEEDFKKLVLEVSEPLELELPEDRKLTDEEIDYEYIDLLVTETLENLKDDVCTCEKDCGVPDCCGTRVEKNLKKVYQIALYMLRDGILYQDLTQEGVIGLMKAHELFEDDKDFKLYKDYYIARAMFNYIESYANYRKTAFKEYAEYEIHKESHPKISLKDKSKSEELKKLEKENKEKHIEEMKQLEKRAEYQFDYLNLKYRLGEREIEAISLYFGLDGHKRKNFSEIQSIMKIDNDTLDKIVKDALFKLSVVDEKVEL

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024703_4	4.57|2157297|38|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR	2157297-2157334	38	NZ_CP024703.1	1254643-1254680	0	1.0

1. spacer 4.57|2157297|38|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR matches to position: 1254643-1254680, mismatch: 0, identity: 1.0

aagattttatcaaaaatttatatctccattattcccag	CRISPR spacer
aagattttatcaaaaatttatatctccattattcccag	Protospacer
**************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	KJ024807	Bacillus phage vB_BtS_BMBtp3, complete genome	29066-29093	5	0.821
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NC_023074	Bacillus thuringiensis serovar tenebrionis str. YBT-1765 plasmid pBMB165, complete sequence	43153-43180	5	0.821
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	KY794643	Staphylococcus phage vB_Sau_S24, complete genome	10790-10817	5	0.821
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NZ_CP044168	Campylobacter jejuni strain AR-0415 plasmid pAR-0415, complete sequence	31325-31352	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NZ_CP044170	Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence	51966-51993	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	LC576631	Staphylococcus phage vB_SauH_DELF3 DNA, complete sequence	46294-46321	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	73405-73432	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	MK448365	Streptococcus satellite phage Javan212, complete genome	622-649	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	MK448366	Streptococcus satellite phage Javan216, complete genome	622-649	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	165294-165321	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	38727-38754	6	0.786
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	LR215721	Staphylococcus phage Stab22 genome assembly, chromosome: I	54868-54895	7	0.75
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	KY794642	Staphylococcus phage vB_Sau_Clo6, complete genome	10703-10730	7	0.75
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	240884-240911	7	0.75
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NZ_CP028865	Borreliella garinii strain 20047 plasmid lp36, complete sequence	9407-9434	7	0.75
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NZ_CP018746	Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1	27594-27621	7	0.75
NZ_CP024703_2	2.1|522406|28|NZ_CP024703|CRISPRCasFinder	522406-522433	28	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	1193918-1193945	7	0.75
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	18911-18946	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019918	Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence	49654-49689	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019919	Borreliella burgdorferi strain PAbe plasmid p_cp32-2, complete sequence	26289-26324	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_018979	Borrelia burgdorferi 297 plasmid 297_cp32-12, complete sequence	25774-25809	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_018981	Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence	25615-25650	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_018984	Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence	25983-26018	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_019003	Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence	25881-25916	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_019004	Borrelia burgdorferi 297 plasmid 297_cp32-11, complete sequence	25757-25792	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_017428	Borreliella burgdorferi JD1 plasmid JD1 cp32-10, complete sequence	25583-25618	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_017398	Borreliella burgdorferi N40 plasmid N40_cp32-5, complete sequence	25593-25628	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_017422	Borreliella burgdorferi N40 plasmid N40_cp32-7, complete sequence	13373-13408	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_017400	Borreliella burgdorferi N40 plasmid N40_cp32-4, complete sequence	11410-11445	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_017396	Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence	25701-25736	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_017425	Borreliella burgdorferi JD1 plasmid JD1 cp32-6, complete sequence	25825-25860	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP028881	Borreliella bavariensis PBi plasmid cp32-7, complete sequence	14531-14566	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_000948	Borreliella burgdorferi B31 plasmid cp32-1, complete sequence	25702-25737	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_000951	Borreliella burgdorferi B31 plasmid cp32-6, complete sequence	25712-25747	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_000952	Borreliella burgdorferi B31 plasmid cp32-7, complete sequence	25606-25641	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_000953	Borreliella burgdorferi B31 plasmid cp32-8, complete sequence	25837-25872	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP015799	Borrelia mayonii strain MN14-1539 plasmid cp32-13, complete sequence	24173-24208	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP015800	Borrelia mayonii strain MN14-1539 plasmid cp32-3, complete sequence	25412-25447	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019846	Borreliella burgdorferi plasmid cp32-1, complete sequence	25678-25713	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019849	Borreliella burgdorferi plasmid cp32-5, complete sequence	25626-25661	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	25627-25662	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019756	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence	56370-56405	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP019757	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-2, complete sequence	26289-26324	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_011731	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence	25899-25934	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_011736	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence	25776-25811	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP017206	Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence	26067-26102	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP017207	Borreliella burgdorferi strain B331 plasmid B331_cp32_5, complete sequence	14407-14442	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP017208	Borreliella burgdorferi strain B331 plasmid B331_cp32_6, complete sequence	25664-25699	8	0.778
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NZ_CP015784	Borrelia mayonii strain MN14-1420 plasmid cp32-3, complete sequence	25379-25414	8	0.778
NZ_CP024703_4	4.46|2156473|35|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR	2156473-2156507	35	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	163855-163889	8	0.771
NZ_CP024703_4	4.46|2156473|35|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR	2156473-2156507	35	MN693423	Marine virus AFVG_25M269, complete genome	7080-7114	8	0.771
NZ_CP024703_4	4.4|2153296|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2153296-2153333	38	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	333524-333561	10	0.737
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_015903	Borreliella bissettii DN127 plasmid cp32-11, complete sequence	25911-25946	10	0.722
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_015909	Borreliella bissettii DN127 plasmid cp32-5, complete sequence	25481-25516	10	0.722
NZ_CP024703_4	4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT	2154503-2154538	36	NC_015910	Borreliella bissettii DN127 plasmid cp32-7, complete sequence	26196-26231	10	0.722
NZ_CP024703_4	4.57|2157297|38|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR	2157297-2157334	38	AP013436	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C100-MedDCM-OCT-S26-C29	10450-10487	10	0.737

1. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to KJ024807 (Bacillus phage vB_BtS_BMBtp3, complete genome) position: , mismatch: 5, identity: 0.821

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
gaaaaaggaagaaaagaaacctagtgaa	Protospacer
 ****************** *** ** .

2. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NC_023074 (Bacillus thuringiensis serovar tenebrionis str. YBT-1765 plasmid pBMB165, complete sequence) position: , mismatch: 5, identity: 0.821

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
gaaaaaggaagaaaagaaacctagtgaa	Protospacer
 ****************** *** ** .

3. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to KY794643 (Staphylococcus phage vB_Sau_S24, complete genome) position: , mismatch: 5, identity: 0.821

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
taaagaagaagaaaagaaaactactaga	Protospacer
****.*.******************. .

4. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NZ_CP044168 (Campylobacter jejuni strain AR-0415 plasmid pAR-0415, complete sequence) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
gaaaaaggaagaaaagaaatctatttaa	Protospacer
 ****************** ***.*  .

5. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NZ_CP044170 (Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
gaaaaaggaagaaaagaaatctatttaa	Protospacer
 ****************** ***.*  .

6. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to LC576631 (Staphylococcus phage vB_SauH_DELF3 DNA, complete sequence) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
gaataaagaagaaaagaaaactactaga	Protospacer
 ** **.******************. .

7. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
ttaaaaggaagaaaagaaaaatatgaag	Protospacer
* ****************** **. . *

8. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to MK448365 (Streptococcus satellite phage Javan212, complete genome) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
taaaaaacaagaaaagaaaactaagatc	Protospacer
******. ***************  .* 

9. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to MK448366 (Streptococcus satellite phage Javan216, complete genome) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
taaaaaacaagaaaagaaaactaaaatc	Protospacer
******. ***************  .* 

10. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
ttaaaaggaagaaaagaaaaatatgaag	Protospacer
* ****************** **. . *

11. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 6, identity: 0.786

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
ttaaaaggaagaaaagaaaaatatgaag	Protospacer
* ****************** **. . *

12. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to LR215721 (Staphylococcus phage Stab22 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.75

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
atttaaggaagaaaagaaaactactaga	Protospacer
    *********************. .

13. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to KY794642 (Staphylococcus phage vB_Sau_Clo6, complete genome) position: , mismatch: 7, identity: 0.75

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
atttaaggaagaaaagaaaactactaga	Protospacer
    *********************. .

14. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 7, identity: 0.75

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
gaaaaaggaagaaacgaaaactatatca	Protospacer
 ************* ********.  ..

15. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NZ_CP028865 (Borreliella garinii strain 20047 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.75

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
taaaaagaaagaaaagaaaaataaaaaa	Protospacer
*******.************ **  . .

16. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NZ_CP018746 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1) position: , mismatch: 7, identity: 0.75

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
taaaaagaaagaaaagaaaaataaaaaa	Protospacer
*******.************ **  . .

17. spacer 2.1|522406|28|NZ_CP024703|CRISPRCasFinder matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 7, identity: 0.75

taaaaaggaagaaaagaaaactactgtg	CRISPR spacer
ggtgaaggaagaaaagaaaacttcttta	Protospacer
 . .****************** ** *.

18. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

19. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019918 (Borreliella burgdorferi strain PAbe plasmid p_cp32-5-1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

20. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019919 (Borreliella burgdorferi strain PAbe plasmid p_cp32-2, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

21. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_018979 (Borrelia burgdorferi 297 plasmid 297_cp32-12, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

22. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_018981 (Borrelia burgdorferi 297 plasmid 297_cp32-5, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

23. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_018984 (Borrelia burgdorferi 297 plasmid 297_cp32-4, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

24. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_019003 (Borrelia burgdorferi 297 plasmid 297_cp32-1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

25. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_019004 (Borrelia burgdorferi 297 plasmid 297_cp32-11, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

26. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_017428 (Borreliella burgdorferi JD1 plasmid JD1 cp32-10, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

27. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_017398 (Borreliella burgdorferi N40 plasmid N40_cp32-5, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

28. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_017422 (Borreliella burgdorferi N40 plasmid N40_cp32-7, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

29. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_017400 (Borreliella burgdorferi N40 plasmid N40_cp32-4, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

30. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_017396 (Borreliella burgdorferi JD1 plasmid JD1 cp32-12, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

31. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_017425 (Borreliella burgdorferi JD1 plasmid JD1 cp32-6, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

32. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028881 (Borreliella bavariensis PBi plasmid cp32-7, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

33. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_000948 (Borreliella burgdorferi B31 plasmid cp32-1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

34. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_000951 (Borreliella burgdorferi B31 plasmid cp32-6, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

35. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_000952 (Borreliella burgdorferi B31 plasmid cp32-7, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

36. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_000953 (Borreliella burgdorferi B31 plasmid cp32-8, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

37. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015799 (Borrelia mayonii strain MN14-1539 plasmid cp32-13, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

38. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015800 (Borrelia mayonii strain MN14-1539 plasmid cp32-3, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

39. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019846 (Borreliella burgdorferi plasmid cp32-1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

40. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019849 (Borreliella burgdorferi plasmid cp32-5, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

41. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

42. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019756 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-1_1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttagca	Protospacer
  ***   ***** ******* ************ . *

43. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019757 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp32-2, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

44. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_011731 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-1, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

45. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_011736 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

46. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017206 (Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

47. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017207 (Borreliella burgdorferi strain B331 plasmid B331_cp32_5, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

48. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017208 (Borreliella burgdorferi strain B331 plasmid B331_cp32_6, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttacca	Protospacer
  ***   ***** ******* ************   *

49. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015784 (Borrelia mayonii strain MN14-1420 plasmid cp32-3, complete sequence) position: , mismatch: 8, identity: 0.778

catta--taatttgtaagaatgttattttcattttaaa	CRISPR spacer
--ttagtgaatttttaagaattttattttcatttatta	Protospacer
  ***   ***** ******* ************   *

50. spacer 4.46|2156473|35|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.771

ttaaatttcttttttatctaataaaacggctttaa	CRISPR spacer
taagattaattttttatctaataaaacggaaaaaa	Protospacer
* *.***  ********************    **

51. spacer 4.46|2156473|35|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR matches to MN693423 (Marine virus AFVG_25M269, complete genome) position: , mismatch: 8, identity: 0.771

ttaaatttcttttttatctaataaaac---ggctttaa	CRISPR spacer
ttaactttcttttttttctaataaatctcaggttc---	Protospacer
**** ********** ********* *   **.*.   

52. spacer 4.4|2153296|38|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 10, identity: 0.737

--------ttatcatctgtatattcatttgtaaaagctacaataac	CRISPR spacer
agtgaagatta--------atattaatttgtataagctacaataac	Protospacer
        ***        ***** ******* *************

53. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_015903 (Borreliella bissettii DN127 plasmid cp32-11, complete sequence) position: , mismatch: 10, identity: 0.722

cattataatttgtaagaatgttattttcattttaaa	CRISPR spacer
ttagagaatttttaagaattttattttcatttacca	Protospacer
.   * ***** ******* ************   *

54. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_015909 (Borreliella bissettii DN127 plasmid cp32-5, complete sequence) position: , mismatch: 10, identity: 0.722

cattataatttgtaagaatgttattttcattttaaa	CRISPR spacer
ttagagaatttttaagaattttattttcatttacca	Protospacer
.   * ***** ******* ************   *

55. spacer 4.20|2154503|36|NZ_CP024703|PILER-CR,CRISPRCasFinder,CRT matches to NC_015910 (Borreliella bissettii DN127 plasmid cp32-7, complete sequence) position: , mismatch: 10, identity: 0.722

cattataatttgtaagaatgttattttcattttaaa	CRISPR spacer
ttagagaatttttaagaattttattttcatttacca	Protospacer
.   * ***** ******* ************   *

56. spacer 4.57|2157297|38|NZ_CP024703|CRISPRCasFinder,CRT,PILER-CR matches to AP013436 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C100-MedDCM-OCT-S26-C29) position: , mismatch: 10, identity: 0.737

aagattttatcaaaaatttatatctccattattcccag	CRISPR spacer
taatttttttcaaaaatttaaatctccattagaaacat	Protospacer
 *. **** *********** **********    ** 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	164987 : 170758	6	Synechococcus_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP024703|164987:170758|DBSCAN-SWA
TTTAATGTTTAAAGTGTCTTAATTTTGAGAATATCATAGAAATATTATTTTTATCACATTCTTCAATAGAATCTTTATCATTTACAGAACCACTAGGTTGAATTATAGCTTTAACTCCATTCTTAGCTGCTAGTTCAACAACATCTCTAAATGGGAAGAATGCATCTGAAGAAAGTACAACATCAGTTGTATTAAATCTTTCTTTAGCTCTTTCTAAAGCTTTTTCAGCTGCCCAAATTCTACTTACTTCTCCTCCACCTATTCCTAATGTTTGTAAATTTTTAGCCACAACTATTGCATTTGACTTTACAAATTTTACCACTTTTAAAGCAAAAATTAAATCTTTTTCTTCTTGACTTGTAGGTTTAGCTTTAGTGACAACTTCTAAATTTTCATATAATCTATCATTTGTATCTTGAACTAAAATTCCACCATCTACTTTTATCAATTCTTTTTTATCACTAGGTTTATTTTTACATTCAATAAGTCTAATATTTTTCTTTTTACTTAAGATTTCTAAAGCAGAAGTTGAAAAACTAGGTGCTATTATAATTTCTAAGAATATTTCATTTAGTAATTTTGCAGTGGCTTCATCAACTTCTTTGTTAAATGCTACTATTCCTCCAAAAATAGATACAGGATCTGTTTCATAAGCTTTTCTATATGCTTCTTCTACATTATCTCCTAATGCAACTCCACAAGGTGTTGAGTGCTTTACTGCACAACAACAAATTTCATCAAATTCTGAAACGACCTTCCAAGCAAGATCCATATCTCTGATATTATTATATGAAAGCTCTTTTCCATTAAGTTGTTTAAAGTTTTTCATAGCTCCATCAGACATATTGTCAGTATAATATGCAGCTTTTTGATGTGAGTTTTCTCCATATCTCATTTCCATAGACTTTTTATATGAAATATTTAGATATTCTGGGAAGTCTTCATCTAATAAGAATTGTGATATAGCTGCATCATAGGCAGAAGTCAAGTTAAATACTTTTCCTGCTAATCTTTTTCTAGTTTCATAAGAAACGTCATCAGACTTATCAATTTCTTCTTTTACAAGCTCATAATCTTTTACATCAGAAATAACAACCACATCTTTAAAAGATTTAGCAGCAGATCTAAGCATAGTAGGTCCACCTATATCAATAAATTCAATTTTTTCTTCAAAAGACAAATCTTCTTTTACTTTTTCAAAGAAAGGATATAGATTTACTATAACATAATCAATAGTATCTATATTTCTTTCTTTTAAAGTTCTCATATGTTCTTCATTATCTCTCAATGCTAAAATTCCACCATGTATATTTGGATGTAAAGTTTTAACTCTACCATCTAACATTTCTTCAAAGTTTGTTATTTTACTAACCTCAATAACTTCAATATTATTTTCTTTTAAATATTTATATGTTCCACCAGTAGAAATAATTTCTATTCCTTTAGTGACTAAGAATTTTGCAAAATCCAATATACCTGTTTTATCATATACTGAAATTAAAGCTCTTTTTTTCATTTCAATTCCCTTCATCTCTACTTTAAATTATTATTTTCTATTAGTTGTTTTACAACTCTTGGTAATAATTTCCATTCTCTCTCTAAGACTATTTTTTGTATTTCTTCAGGAGACCTTGCCATACTGATATCAACTTTATCCTGTCCTATAATTTCACCAGCATCAACATCTGATGTAACATAATGAACTGTACAGCCACTTTCTTTATCTCCATTTTCAAATACTGCTTGATGAACTTTTAGTCCATACATCCCTTTACCTCCATATTTTGGAAGTAATGAGGGATGTATATTTATAATTTTATTTTTATATTTTTCTAATATTTCTCCATCTAATATAGATAAAAATCCTGCCAATACTATTAAATCAGGCTTTTTTTCTTCAAATATTTTTAATAAATTTTTTGAAATTTCTTTATCTCTATTTAAAAGAATAAAATCAATATTATATTCATCTGCAATATTTTTTGCTTTACATTCTCTATCAGCAATTATACAATCTATTCTTATATCATTTTTTATTAGTTGCAACATATTAGTTCCACTACCAGATACTAACACTATTATTTTAAACATAAAGAATGATCTCCTTTTTCAATATGTCCTATTTCATAAGCAGTTTCCCCTAATGAATTCAATAATTCAATAATCGATTCAACATCTTTTTCTTCTACTACTAAAGTAAAACCTACTCCCATATTGAAAGTTCCAAATAATTCTTCTTCTTTTATTTTACTTCTTTCAGCAATCAACTTAAATATTTCAGGAACTCTTACTTTTTCTCTAAATACTACTGGAGATAAATCTTTTCCCATACAACGAGGTAAGTTTTCATATAGACCTCCACCTGTTATATGTGCCATACCATTTACATTAAACTTTTCTAAAACTTTTAAGATAGGTTTTACATAAATTTTTGTAGGAGTCAATAAAACCTCTCCCATAGTTACATTTTCTCCGTATTCTTTTAAAGAAACTTTTTCATTATAGTCAGTAAATACTTTTCTTACTAGTGAGTATCCATTGCTATGGAAACCACTTGAAGCCACTGCTATTATTTTATTTCCTTCTTTAACTTTTGAACCATCTATTAAATTATCTTTTTCAACTATTCCAACACAGAAACCTGCTATATCATAGTCTCCTTCTTGATAAAAACCTGGCATTTCAGCAGTTTCTCCACCAACTAAGGCAGCGTAAGATTGTAGACAACCTTCTGTAACTCCTGAAACTAATTGTGCAGCCACTTCTGCATCAAGTTTTCCACAAGCCAAATAATCTAGGAAAAATAATGGTTTTGCTCCATGGCATAGTACATCATTTACACACATAGCAACACAATCTATTCCTACTGTATCATATTTTTTTTGTTTCATTGCAATTTCTAATTTTGTTCCAACTCCATCAGTTCCTGAAATTAAAACAGGATTTTTATATTGTCCTAATTCATACATAGCTCCAAAGCTACCTAAGTTTGTTAAAACAGATTTATTATGAGTTTTTAAAACATTTTTCTTCATTAATTCAACTGCTTTGTATCCTTCTTCTTTGTCAACACCTGAATCTTTATAAGAATTTATCATTATTCCTCCCATTTTTTGTTGTTAGTTTTACTTTTACTAAATTATTCCTCATCTTCTTTGAAGCAACCTGTATAGAAATCTTCTCCACCATTTAAAATTTTCTTTAAATTCTTTAATGATAGATAATCTAAAGTTGTTGCTCCTATTGCTTTTCTTATTTCTTCGATGCTCATATAACTACCCATTAATTTATTGCTAGGATCTATATTTACACCAAAATATGATTCTTCTATAACAACAGGAGAAGCTGCTCTAAAATGTACTTCTTTTGCTCCAGCTTCAAATAAAACATCTATTAGTTTTTTAGATGTTGTTCCACGAACTATAGAGTCGTCTATAACTACTACTCTTTTATCTTTAATCAATTCTTTTATTGGATTTAATTTAACTCTTACTGCTCTTTCTCTTAATTCTTGAACTGGAGCAATAAATGTTCTTCCTACATATTTATTTTTTAAAAGTGCTGCTGAATAAGGGATACCACTTGCTTCAGAATATCCTATTGCTGCAGGAACTCCTGAATCAGGAACACCTATAACTATATCAGCTTCTATTGGATTTTGTTCATACAAATATTTTCCTGTTTGTTGTCTAAAATCATAGACACTAATTCCATCTATAACACTATCTGGTCTTCCAAAATAGATATATTCAAATGAACTTGCTTTTTTAGTACTTTCTTTATATTTTATGCTTTCCACTCCATTATCATCTATAACTACCATTTCTCCAGCTTCAATATCTCTTACGAATTCTGCACCTATAGCATCTAATGCACAACTTTCAGAAGCTAGAACATACATATCATCTTCAGGTATTCTACCTAAACATAATGGTCTTAATCCTTCAGGATCACGCACTCCTATAAGTTTATCATTTATTATTATTCCAAGAGCAAAACAACCTTTTAATTTTTCAACAGTTTTTAAAACTGCTTCTTTATATCCATAATTACCATTAATACTTAAAAATTTTAGTATAATTTCAGTATCTATTGATGTTTGAAATAAAGAACCATTGTTTAATAATTCTTGTTTTAACTCTTCTCTATTTGATAGATCACCATTATGTACAAGAGATATATATCCCATTGCAGACTCTCCACCTATAGGTTGACAGTTTCTTATAGAAACTGTATTCTTGCTACCATATCTTGTATGTGCTATTAAAATATTTCCAAGATATTTTTGGAAGTCTTCAACTTTGAACACATCTGAAACAAGTCCAATATTTTTAACTGTCTTTATTCTAACTTCATTATTAGTTTTAGAATCACAGATAGTATAACCTGCTCCTTCTTGTCCTCTATGTTGTAAAGCATACATTCCATAATATGCAATTCCTACTAAGTCCTTTCTAACCTTTTTTGAGTGCAAAGCTAATATACCCATTTTTTTATTTCTCCTTTTTTTATAAACAAATCCTTAATTTTTAATTTTATTTTGCTTCAGTCAATCTTTTTACAACTTCTATATATGCTTCTTCTATATTTCCTAAATCTCTTCTGAATCTATCTTTATCTAGTTTTTCACCAGTTTCTTTATCCCATAATCTACAAGTATCAGGAGTGATTTCATCAGCAAGTAAGATTTCTCCTTTAGAGTTTTTACCAAATTCAATTTTGAAATCTACTAAAGTTATTCCAATTTTATCAAATTTTTCTTTTAAAAGATTATTAATTTTTCCAGTGATATCATAGATTTCTTTTAATTCATCATAAGTTGCAAGTCCCATTGCTACTGCATGGTGGTCATTTATTAAAGGATCTCCATACTCATCATTTTTATAACAAATTTCAAATATAGTATTGTTTATTTTAGTTCCTTCTTTAATTCCAACTCTTTTAGCCATAGAACCAGCTATTATATTTCTAACTATTACTTCTAAAGGAAATATTGTTACTCTTTGACATAGTTGATCTCTGTCATTTAATTTTTTTACAAAGTGAGTTTTTATTCCATGTTCTTCTAACATATTAAATATTAAAGTTGTTATTTCATTATTCATTACACCTTTATTATGGATAGTTCCTTTTTTAGCTCCATTTCCAGCAGTTGCATCATCTTTATAGTGAACGATAACTAAATCCTTATCATCAGTTTCATATAATTGTTTTGCCTTTCCTTCATAAATAAATTTTCCTTTTTCCATTTTTATTCCCTCCTAATTTTTAAATAACGAATTATTTTCTTTATTTTTATTATAGTTCTACATGTATATTTTTTTTGAAATCTTCTTTCATTTCTTTTCTAAATTCTAAAAGTTTTGCTTTTAAATCTTTATTTCCAACTGCTAATATTTCTACTGCTAACATTCCAGCATTATATGAATTATTTATTGCTACAGTTGCAACAGGAATTGATTTTGGCATTTGTACTATTGAAAATAGTGCATCTAAACCTTCTACTGCTGCTTTTATAGGTACACCTATTACAGGTAAAACAGTTTTTGAAGCTATAACTCCTGGTAAATGTGCTGCAAGTCCAGCCCCAGCAATGATAACCCCATAATCTTCTTTTTCAAATTTTTCTAATGTTTCTTCTAAAAGTTCAGGAACTCTATGAGCTGATAGCACATGAGCTGTATATTCAATTCCAAACTTTTTCAAGCAGTCTGCTGCTCCTTTCATTACATCAACATCTGATTTACTTCCAAATATTATTCCTACTTTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP024703|164987:170758|167064_168084_-|WP_099991942.1|DBSCAN-SWA
MINSYKDSGVDKEEGYKAVELMKKNVLKTHNKSVLTNLGSFGAMYELGQYKNPVLISGTDGVGTKLEIAMKQKKYDTVGIDCVAMCVNDVLCHGAKPLFFLDYLACGKLDAEVAAQLVSGVTEGCLQSYAALVGGETAEMPGFYQEGDYDIAGFCVGIVEKDNLIDGSKVKEGNKIIAVASSGFHSNGYSLVRKVFTDYNEKVSLKEYGENVTMGEVLLTPTKIYVKPILKVLEKFNVNGMAHITGGGLYENLPRCMGKDLSPVVFREKVRVPEIFKLIAERSKIKEEELFGTFNMGVGFTLVVEEKDVESIIELLNSLGETAYEIGHIEKGDHSLCLK
>NZ_CP024703|164987:170758|169521_170235_-|WP_005974331.1|DBSCAN-SWA
MEKGKFIYEGKAKQLYETDDKDLVIVHYKDDATAGNGAKKGTIHNKGVMNNEITTLIFNMLEEHGIKTHFVKKLNDRDQLCQRVTIFPLEVIVRNIIAGSMAKRVGIKEGTKINNTIFEICYKNDEYGDPLINDHHAVAMGLATYDELKEIYDITGKINNLLKEKFDKIGITLVDFKIEFGKNSKGEILLADEITPDTCRLWDKETGEKLDKDRFRRDLGNIEEAYIEVVKRLTEAK
>NZ_CP024703|164987:170758|164987_166502_-|WP_099991936.1|DBSCAN-SWA
MKKRALISVYDKTGILDFAKFLVTKGIEIISTGGTYKYLKENNIEVIEVSKITNFEEMLDGRVKTLHPNIHGGILALRDNEEHMRTLKERNIDTIDYVIVNLYPFFEKVKEDLSFEEKIEFIDIGGPTMLRSAAKSFKDVVVISDVKDYELVKEEIDKSDDVSYETRKRLAGKVFNLTSAYDAAISQFLLDEDFPEYLNISYKKSMEMRYGENSHQKAAYYTDNMSDGAMKNFKQLNGKELSYNNIRDMDLAWKVVSEFDEICCCAVKHSTPCGVALGDNVEEAYRKAYETDPVSIFGGIVAFNKEVDEATAKLLNEIFLEIIIAPSFSTSALEILSKKKNIRLIECKNKPSDKKELIKVDGGILVQDTNDRLYENLEVVTKAKPTSQEEKDLIFALKVVKFVKSNAIVVAKNLQTLGIGGGEVSRIWAAEKALERAKERFNTTDVVLSSDAFFPFRDVVELAAKNGVKAIIQPSGSVNDKDSIEECDKNNISMIFSKLRHFKH
>NZ_CP024703|164987:170758|170284_170758_-|WP_099972079.1|DBSCAN-SWA
MKVGIIFGSKSDVDVMKGAADCLKKFGIEYTAHVLSAHRVPELLEETLEKFEKEDYGVIIAGAGLAAHLPGVIASKTVLPVIGVPIKAAVEGLDALFSIVQMPKSIPVATVAINNSYNAGMLAVEILAVGNKDLKAKLLEFRKEMKEDFKKNIHVEL
>NZ_CP024703|164987:170758|168125_169475_-|WP_099991945.1|DBSCAN-SWA
MGILALHSKKVRKDLVGIAYYGMYALQHRGQEGAGYTICDSKTNNEVRIKTVKNIGLVSDVFKVEDFQKYLGNILIAHTRYGSKNTVSIRNCQPIGGESAMGYISLVHNGDLSNREELKQELLNNGSLFQTSIDTEIILKFLSINGNYGYKEAVLKTVEKLKGCFALGIIINDKLIGVRDPEGLRPLCLGRIPEDDMYVLASESCALDAIGAEFVRDIEAGEMVVIDDNGVESIKYKESTKKASSFEYIYFGRPDSVIDGISVYDFRQQTGKYLYEQNPIEADIVIGVPDSGVPAAIGYSEASGIPYSAALLKNKYVGRTFIAPVQELRERAVRVKLNPIKELIKDKRVVVIDDSIVRGTTSKKLIDVLFEAGAKEVHFRAASPVVIEESYFGVNIDPSNKLMGSYMSIEEIRKAIGATTLDYLSLKNLKKILNGGEDFYTGCFKEDEE
>NZ_CP024703|164987:170758|166519_167077_-|WP_099991939.1|DBSCAN-SWA
MFKIIVLVSGSGTNMLQLIKNDIRIDCIIADRECKAKNIADEYNIDFILLNRDKEISKNLLKIFEEKKPDLIVLAGFLSILDGEILEKYKNKIINIHPSLLPKYGGKGMYGLKVHQAVFENGDKESGCTVHYVTSDVDAGEIIGQDKVDISMARSPEEIQKIVLEREWKLLPRVVKQLIENNNLK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099991936.1|164987_166502_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.6e-58	42.9
WP_099991939.1|166519_167077_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.9e-21	35.9
WP_099991942.1|167064_168084_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A127KMF9	Cyanophage	9.5e-65	43.8
WP_099991945.1|168125_169475_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	2.6e-49	31.1
WP_005974331.1|169521_170235_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	5.5e-43	42.8
WP_099972079.1|170284_170758_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	4.5e-25	48.3