CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016634	Pseudomonas putida strain IEC33019 chromosome, complete genome	3 crisprs	csa3,cas3,DinG,WYL,DEDDh,PD-DExK,casR	1	0	9	0
NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	1 crisprs	RT	0	3	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016634_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016634_1

880400-880473

Orphan

Consensus_repeat	Method
ACCTTTACGTTAACGTAAACCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016634_1

>merge|NZ_CP016634|1|880400-880473|CRISPRCasFinder
ACCTTTACGTTAACGTAAACCTGCCGCTCGGCACTGTCAATCGACCTGTGACCTTTACGTTAACGTAAATCTGC

>NZ_CP016634|1|1|880400-880473|CRISPRCasFinder
ACCTTTACGTTAACGTAAACCTGC	CGCTCGGCACTGTCAATCGACCTGTG
ACCTTTACGTTAACGTAAATCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016634.1\|WP_070092715.1\|870932_871175_-\|DUF465-domain-containing-protein	unknown	unknown	unknown
NZ_CP016634.1\|WP_070092714.1\|871706_872855_-\|carboxypeptidase-family-protein	unknown	unknown	gnl\|CDD\|349453
NZ_CP016634.1\|WP_070092713.1\|873544_873862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016634.1\|WP_070092700.1\|895349_895652_-\|DUF2934-domain-containing-protein	unknown	unknown	gnl\|CDD\|378572
NZ_CP016634.1\|WP_070092705.1\|884870_888182_+\|maltose-alpha-D-glucosyltransferase	unknown	unknown	gnl\|CDD\|274140
NZ_CP016634.1\|WP_070092703.1\|890711_891788_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|377133
NZ_CP016634.1\|WP_070092699.1\|895666_898441_-\|malto-oligosyltrehalose-synthase	unknown	unknown	gnl\|CDD\|237740
NZ_CP016634.1\|WP_070092718.1\|873992_874646_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP016634.1\|WP_170831781.1\|882407_882575_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237940
NZ_CP016634.1\|WP_099593104.1\|880531_882202_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236236
NZ_CP016634.1\|WP_070092706.1\|882712_884731_+\|alpha-1,4-glucan--maltose-1-phosphate-maltosyltransferase	unknown	unknown	gnl\|CDD\|200482
NZ_CP016634.1\|WP_070094721.1\|866926_868810_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP016634.1\|WP_070092704.1\|888258_890469_+\|1,4-alpha-glucan-branching-protein-GlgB	unknown	unknown	gnl\|CDD\|235445
NZ_CP016634.1\|WP_099593099.1\|868864_870826_+\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP016634.1\|WP_070092702.1\|892118_892913_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|226098
NZ_CP016634.1\|WP_070092701.1\|893052_895206_-\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|131155
NZ_CP016634.1\|WP_070092710.1\|877478_879086_-\|methylcrotonoyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|178415
NZ_CP016634.1\|WP_099593102.1\|874713_876666_-\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|227111
NZ_CP016634.1\|WP_070092711.1\|876662_877475_-\|gamma-carboxygeranoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|168168
NZ_CP016634.1\|WP_070092709.1\|879105_880269_-\|isovaleryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173845

Protein	Function_ID	Function_description	E-value
NZ_CP016634.1\|WP_070092702.1\|892118_892913_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	7.61376e-72
NZ_CP016634.1\|WP_070092714.1\|871706_872855_-\|carboxypeptidase-family-protein	gnl\|CDD\|349453	cd06234, M14_PaCCP-like, Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases similar to Pseudomonas aerugnosa CCP (PaCCP). A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. This subgroup includes PaCCP from Pseudomonas aeruginosa, a carboxypeptidase homologous to M14D subfamily of human CCPs. Structural complexes with well-known inhibitors of metallocarboxypeptidases indicate that PaCCP might only possess C-terminal hydrolase activity against cellular substrates of particular specificity. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.	4.41998e-134
NZ_CP016634.1\|WP_070092700.1\|895349_895652_-\|DUF2934-domain-containing-protein	gnl\|CDD\|378572	pfam11154, DUF2934, Protein of unknown function (DUF2934). This bacterial family of proteins has no known function.	1.02961e-09
NZ_CP016634.1\|WP_070092705.1\|884870_888182_+\|maltose-alpha-D-glucosyltransferase	gnl\|CDD\|274140	TIGR02456, Trehalose_synthase, trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP016634.1\|WP_070092703.1\|890711_891788_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	1.00585e-28
NZ_CP016634.1\|WP_070092699.1\|895666_898441_-\|malto-oligosyltrehalose-synthase	gnl\|CDD\|237740	PRK14511, PRK14511, malto-oligosyltrehalose synthase.	0
NZ_CP016634.1\|WP_070092718.1\|873992_874646_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	1.78483e-21
NZ_CP016634.1\|WP_070092711.1\|876662_877475_-\|gamma-carboxygeranoyl-CoA-hydratase	gnl\|CDD\|168168	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated.	0
NZ_CP016634.1\|WP_099593104.1\|880531_882202_+\|AMP-binding-protein	gnl\|CDD\|236236	PRK08315, PRK08315, AMP-binding domain protein; Validated.	0
NZ_CP016634.1\|WP_070092706.1\|882712_884731_+\|alpha-1,4-glucan--maltose-1-phosphate-maltosyltransferase	gnl\|CDD\|200482	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins. GlgE is a (1,4)-a-D-glucan:phosphate a-D-maltosyltransferase, involved in a-glucan biosynthesis in bacteria. It is also an anti-tuberculosis drug target. GlgE isoform I from Streptomyces coelicolor has the same catalytic and very similar kinetic properties to GlgE from Mycobacterium tuberculosis. GlgE from Streptomyces coelicolor forms a homodimer with each subunit comprising five domains (A, B, C, N, and S) and 2 inserts. Domain A is a catalytic alpha-amylase-type domain that along with domain N, which has a beta-sandwich fold and forms the core of the dimer interface, binds cyclodextrins. Domain A, B, and the 2 inserts define a well conserved donor pocket that binds maltose. Cyclodextrins competitively inhibit the binding of maltooligosaccharides to the S. coelicolor enzyme, indicating that the hydrophobic patch overlaps with the acceptor binding site. This is not the case in M. tuberculosis GlgE because cyclodextrins do not inhibit this enzyme, despite acceptor length specificity being conserved. Domain C is hypothesized to help stabilize domain A and could be involved in substrate binding. Domain S is a helix bundle that is inserted within the N domain and it plays a role in the dimer interface and interacts directly with domain B. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP016634.1\|WP_070094721.1\|866926_868810_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	8.65699e-68
NZ_CP016634.1\|WP_070092704.1\|888258_890469_+\|1,4-alpha-glucan-branching-protein-GlgB	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP016634.1\|WP_099593099.1\|868864_870826_+\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP016634.1\|WP_070092701.1\|893052_895206_-\|glycogen-debranching-protein-GlgX	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP016634.1\|WP_070092710.1\|877478_879086_-\|methylcrotonoyl-CoA-carboxylase	gnl\|CDD\|178415	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain.	0
NZ_CP016634.1\|WP_099593102.1\|874713_876666_-\|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP016634.1\|WP_170831781.1\|882407_882575_-\|hypothetical-protein	gnl\|CDD\|237940	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL.	5.12764e-05
NZ_CP016634.1\|WP_070092709.1\|879105_880269_-\|isovaleryl-CoA-dehydrogenase	gnl\|CDD\|173845	cd01156, IVD, Isovaleryl-CoA dehydrogenase. Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA dehydrogenase, which catalyzes the third step in leucine catabolism, the conversion of isovaleryl-CoA (3-methylbutyryl-CoA) into 3-methylcrotonyl-CoA. IVD is a homotetramer and has the greatest affinity for small branched chain substrates.	0

>NZ_CP016634.1|WP_070092709.1|879105_880269_-|isovaleryl-CoA-dehydrogenase
MHYPTLNFALGETIDMLRDQVRTFVAAELAPRAAQIDHDNLFPADMWRKFGDMGLLGITVPEEYGGAGLGYLAHVVSMEEISRGSASVALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEHIGALAMSEPNAGSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGPHGITAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDGVEVPQENILGQLNGGVRVLMSGLDYERVVLSGGPTGIMQACMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRAYLYAVAQACDRGETTRKDAAGVILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR
>NZ_CP016634.1|WP_070092710.1|877478_879086_-|methylcrotonoyl-CoA-carboxylase
MAILHTQINPRSTEFSANSAAMLEQVQALRTLLAQVSQGGGPKAQERHTSRGKLLPRERIDRLLDPGSPFLEIGQLAAHEVYGEDVPAAGVIAGIGRIEGVECMIVANDATVKGGSYYPLTVKKHLRAQAIALQNRLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSALGIPQIAVVMGSCTAGGAYVPAMADEAIMVRQQATIFLAGPPLVKAATGEVVSAEDLGGADVHCRISGVADHYADNDEHALALARRSVANLNWRKLGQLQRQAPIAPLYEAQELYGVVPADAKQPFDVREVIARLVDGSVFDEFKALFGTTLVCGFAHLHGYPVAILANNGILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGKKYEEGGIAKHGAKLVTAVACAQVPKFTVIIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGAEQAAGVLAQVKREQSERAGTAFSAEEEAKLKQPILDQYERQGHPYYSSARLWDDGVIDPAQTRDVLGLALSAALNAPIEQTRFGIFRM
>NZ_CP016634.1|WP_070092711.1|876662_877475_-|gamma-carboxygeranoyl-CoA-hydratase
MSDFSTLEVIKDARGFATLWLSREDKNNAFNAQMIRELIVALDQLAEDANLRFILLRGRGRHFSAGADLAWMQQSAQLDFNTNLDDAHELGELMYALHRLKAPTLAVVQGAAFGGALGLISCCDMAIGAEDAQLCLSEVRIGLAPAVISPFVVKAIGERAARRYALTAERFSGVRARELGLLAEVYPASELDAQVEAWVDNLLLNSPQALRATKDLLREVDDGELSPALRRYCENTIARIRVSPEGQEGLRAFLEKRRPAWQANEKEPRP
>NZ_CP016634.1|WP_099593102.1|874713_876666_-|acetyl/propionyl/methylcrotonyl-CoA-carboxylase-subunit-alpha
MSRPTLTTLLVANRGEIACRVMRTAKAMGLTTVAVHSATDRDARHSREADIRIDLGGTKAAESYLVIDKLIAAAKASGAQAIHPGYGFLSENAGFARAIEHAGLIFLGPPASAIDAMGSKSAAKALMESAGVPLVPGYHGDAQDLETFRAAAERIGYPVLLKASAGGGGKGMKVVEEESQLADALASAQREAQSSFGDARMLVEKYVLKPRHVEIQVFADQYGNCLYLNERDCSIQRRHQKVVEEAPAPGLSAELRQAMGEAAVRAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVACGEPLPITQAQVPLIGHAIEVRLYAEDPANEFLPATGTLALYRESAPGEGRRVDSGVSEGDVVSPFYDPMLGKLIAWGQDREQARLRLLAMLDEFAIGGLKTNIAFLRRILAHPAFAAAELDTGFIPRHQAELLPAPAALPADFWQAAAEAWLQGSPTLQRQDDPCSPWARHDGLRLGLPARSSLHLVSGGQDQAVALEYSAPSTWQLHGEHLCHERDGLRRRHLAIRRGDTLYLQWNGEMHAVSAFDPIAEAEASHSHQGGLSAPMNGSIVRVLVEPGQAVEAGTALVVLEAMKMEHSIRAPHDGTVKALFCQEGDMVSEGAALVELAD
>NZ_CP016634.1|WP_070092718.1|873992_874646_+|helix-turn-helix-domain-containing-protein
MENWNEFLARYKREHKLNQLKLAERLGMTQGGVGHWLRGTRKPTLATINEKLEKLGLVYLQAQVMVVERNLLRETPGIYAPGRPISGEALRYASFRLPVLAWSDLQGTLPETADVHEQSDYMPAGNAFWLPVENDSMNAASGTSVPQGMLILVDTGLEVTPGKLVIARQPGKAAVLRQLIEEGGERMLRPLNTRYPTVLCEEGCEFLGVVVRVHGKF
>NZ_CP016634.1|WP_070092713.1|873544_873862_-|hypothetical-protein
MKPSKNDETDLDSEAARRALDYYLNPTPPRPNLDTKIWTLHEGVSAAQARDHALALLRCASATAHETANHQPQGMTREVMFALMHMMNMARALLEHEQASGKTEK
>NZ_CP016634.1|WP_070092714.1|871706_872855_-|carboxypeptidase-family-protein
MTVTLSPLQIDCDFDSGNIQVLDTRDPSRVRLAIRPDTNSGHFQWFHFKASGLTPGQTHRFSLDNASQSSYNKAWHGYQAVASYDQQHWFRIPSQFDGQALVFELQAQAPQAWFAYFEPYPRARHNQLIERAKQLQNVELLACGRSVQGRDIPLLRAGDGAPGKRKLWLIAQQHPGEHMAEWFMEGVIDRLQANDSTVQTLLAAADLYLIPNMNPDGAFLGHLRTNFKGKDLNRAWQDANVELSPEVFFAQSQMKQHGVDAFIDVHGDEEIPHVFTAACEGNPGYSPRLAKLEEQFRTTLCSITPDFQTVHGYTRDEPGQANMTLACNAVGQAYDCLSLTLEMPFKDHDDAPNAITGWSGERSKALAGAVLETLSKMAKDLR
>NZ_CP016634.1|WP_070092715.1|870932_871175_-|DUF465-domain-containing-protein
MPVSHDLYQDLHYPREIVQQRRQEDKALDRLLDEYMDIDNQVLAAESISAGIADDDDLRRLKERRLAVKYMIERQLERKA
>NZ_CP016634.1|WP_099593099.1|868864_870826_+|acetate--CoA-ligase
MSAAPLYPVRPEVAATTLTDEATYKAMYQQSVINPDGFWREQAQRLDWIKPFTKVKQTSFDDHHVDIKWFADGTLNVSYNCLDRHLAERGDQVAIIWEGDDPADSRNITYRELHEQVCKFANALRGQDVHRGDVVTIYMPMIPEAVVAMLACARIGAIHSVVFGGFSPEALAGRIIDCRSKIVITADEGVRGGRRTPLKANVDLALTNPETSSVQKIIVCKRTGGDIAWHQHRDIWYEDLMKVASSHCAPKEMGAEEPLFILYTSGSTGKPKGVLHTTGGYLVYAALTHERVFDYRPDEVYWCTADVGWVTGHSYIVYGPLANGATTLLFEGVPNYPDITRVSKIIDKHQVNILYTAPTAIRAMMAEGQAAVAGADGSSLRLLGSVGEPINPEAWNWYYQAVGKERCPIVDTWWQTETGGILISPLPGATGLKPGSATRPFFGVVPALVDNLGNLIEGAAEGNLVILDSWPGQSRSLYGDHDRFVDTYFKTFRGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESAMVAHAKVAEAAVVGVPHDIKGQGIYVYVTLNAGEQPSEALRLELKNWVRKEIGPIASPDVIQWAPGLPKTRSGKIMRRILRKIATGEYDALGDISTLADPGVVQHLIDTHKAMALASA
>NZ_CP016634.1|WP_070094721.1|866926_868810_+|methyl-accepting-chemotaxis-protein
MKIRYKVSLAAACVLLVTTSLLSLAQVSQVRTVLRTQTGESILESSTAVARQIENWLNGKLHLMDLTVQTIDSQASAQNIQRITDAPLLKQEFALVFGALQVDGKPIGNLNAWKPKPGYDGRTRPWYATGEGSTQAVLTEPYQDSSTGKVLISAVSRITDAGRFAGVLGGDIHLDTVTEAINTLDFSGAGYAFLLNRNGNIISHPDAQFNGKPYSALFGGAQPALESQLQTIEVEGKSLLVSFIPLSNLKGMQWYIGVVLDEGIVMAASHQLSWRAAAGTALGVLLSLLVLGLLVRHLLLPLDRLKASLADMNRGNGDLTRQLPVSGHDEVALVSVEFNQFLGNLKALIGDVQQTSLQVRQSTTATSYEANQAASRVQLQLQELDQLAAAMNEMASTAEDVARNAQAAAQAAVAAHDQTENGVALVLRSTGAINGLAEEMNTTGQAINELSTLSHSIESILSVITSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRSLASRTQQSTQEIRLMIDQLQAGVRQAQTRMQQSRDAASKTAEDANAANETLGRIREAIYRINDMNLQIAAAAEQQSATSEEINRNTTNIRDIGLEVSGGAQQQVSQCSVMVEHVGQQDRLLSRFQI
>NZ_CP016634.1|WP_099593104.1|880531_882202_+|AMP-binding-protein
MSQPSYTRGRQDRPLLTLTIGQAFDATAARHPDGEALVVRHQGQRYSWRQLAEAVDGHARALMALGVQVGDRVGIWAPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCSWLVCADAFKTSDYHAMLLDLAPELRTSTPGQLTCERLPALRGVISLAANPPAGFLPWARLSERAGQTDLAAYAARQRSLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGYMVGASLGLTAQDRMVIPVPLYHCFGMVMANLGCITHGCTMIYPNDAFDPGLTLQAVAEERASILYGVPTMFIAMLDHPGRADLDLSSLRSGIMAGATCPIEVMRRVIEQMHMAQVQIAYGMTETSPVSLQTGPDDELELRVTTVGRTQPQLESKLVDEHGNIVPRGEIGELCTRGYSVMLGYWNNAQATQDAIDPAGWMHSGDVAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEVVAWIKLHPGHSVTAEELQGWCKARIAHFKVPRHYRFVEEFPMTVTGKVQKFRMREISIAEINL
>NZ_CP016634.1|WP_170831781.1|882407_882575_-|hypothetical-protein
MNIPIPPETPDPNIDDPTLPPPLPEEEPDELPIKPTVPPTVGDPPSEEPPVKGKG
>NZ_CP016634.1|WP_070092706.1|882712_884731_+|alpha-1,4-glucan--maltose-1-phosphate-maltosyltransferase
MSGNEPFDSVPMANDHPDQALSLSQALLAPRIVVEDTQPVLDAGTFATKAVRGQRVAVSSKVYSDGHDRLAVVLHWRQSHSRRWHTVPMHSPGNDLWLAEFTPLELGLHLFSIEAWIDPFATYCHDLEKKYHAGVDITLELEEGRLLLGKGIERSSGPLHEQLEQLQQRLPSLTADDQVALLLHPGTAALMVDAEHRSYLTRSAEFPVDVDREQALFASWYELFPRSITDSAERHGTFNDVHQRLPMIRDMGFDVLYFPPIHPIGAKHRKGRNNALQAEPGDPGSPYAIGSPEGGHDAIHPQLGSREDFRRLVAAAAEHGLEIALDFAIQCSQDHPWLSEHPGWFSWRPDGTIRYAENPPKKYQDIVNVDFYAAEAVPSLWLALRDVVVGWVEEGVRTFRVDNPHTKPLPFWQWLIANVRSRYPDVIFLAEAFTRPAMMARLGKVGYAQSYTYFTWRNTKQELREYFQQLNQPPWCHCYRPNFFVNTPDINPYFLQTSGRAGFLIRAALATMGSGLWGMYSGFELCEGTPLPGKEEYLDSEKYEIRPRDFTQPGNIIAEIAQLNRIRRQNRALQTHLGVEFFNCWNDNILYFAKRTPERDNYILVAISLDPYNAQQAHFELPLWELGLDDNADTLGEDLMNGHRWTWHGKTQWMRIEPWHLPFGIWRIEKAH
>NZ_CP016634.1|WP_070092705.1|884870_888182_+|maltose-alpha-D-glucosyltransferase
MAKRSRPQAFIDDPLWYKDAVIYQLHIKSFFDSNNDGIGDFAGLIGKLDYIAELGVNTLWLLPFYPSPRRDDGYDIAEYKAVHSDYGTLADARRFIAEAHKRGLRVITELVINHTSDQHPWFQRARHAKRGSKARDFYVWSDDDQKYDGTRIIFLDTEKSNWTWDPVAGQYFWHRFYSHQPDLNFDNPQVMKAVIGVMRFWLDLGVDGLRLDAIPYLIERDGTNNENLPETHDVLKAIRAEIDANYPDRMLLAEANQWPEDTRPYFGEGDGDECHMAFHFPLMPRMYMALAMEDRFPITDILRQTPEIPANCQWAIFLRNHDELTLEMVTDRERDYLWNYYAEDRRARINLGIRRRLAPLLQRDRRRIELLTSLLLSMPGTPTLYYGDELGMGDNIYLGDRDGVRTPMQWSPDRNGGFSRADPQRLVLPPIMDPLYGYQTVNVEAQSHDPHSLLNWNRRLLAVRKQQKAFGRGTLKMLTPSNRRILAYLREYTDAEGNSEIVLCVANVSRAAQAAELELSAYADKVPVEMLGGSAFPPIGQLPFLLTLPPYGFYWFLLASRDRMPSWHIEPSEGLPELTTLVLRKRMEELLDAPSSDTLETTILPQYLPKRRWFAGKQGPIDQVRLSYGVRLATATTPVLLSELQVHSDGAVQHYQLPFGLLPEEQINSALPQQLALSRVRRGRQVGLITDAFVLEPFIRAVLSNCQSRTRLPCGVGELHFDCTEQLASLALNEESEVRYLSAEQSNSSVVVGGSLVLKLIRRVNPGIHPELEMSAYLTAAGFANISPLLGWVSRVDDQGTPHLLMIAQGYLNNQGDAWDWTQNTLERAVRDEMEPASVEPEAHTDALVELTGFAALLGQRLGEMHLLLAAPSDDVAFVPQPSTAEDCARWSTQISAQLDHALDLLTRHRDSLDRDSQALVDDLAQQRDGLAQHIDTLAHQAQGGLLMRVHGDLHLGQVLVVQGDAYLIDFEGEPARPLQERRAKHSPYKDVSGVLRSFDYAAAMILRSASAVDLSDVARQARQRVARQYLHQSRHAFVEAYGLATAAMPHAWEQAEGERAALELFCLEKAAYEITYEAENRPGWLAVPLHGLHGLISTWGEG
>NZ_CP016634.1|WP_070092704.1|888258_890469_+|1,4-alpha-glucan-branching-protein-GlgB
MNATTRDNGGLRQRDLDALARAEHANPFAVLGPHADGAGGLSIRAFLPNALSVHVLARHDGRVLAEMVQGSLPGLFTAHLDEAHPYLLRIGWAGGEQITEDPYSFGPQLGEMDLYLFAEGNHRDLSGRFGAQPMRADGIEGVCFSVWAPNARRVSVVGDFNNWDGRRHPMRLRHDAGVWELFVPRLGVGEAYKFEVLGHDGVLPLKADPLARATELPPSTASKVSGPLAYAWQDHDWMQQRAARHAYSAPLSIYELHAGSWRCELDDAGEVSRFYNWRELAERLVPYVQELGFTHIELLPIMEHPFGGSWGYQPLSLFAPTSRYGSAEDFAAFVDACHQGGIGVLLDWVPAHFPTDEHGLARFDGTALYEYDNPLEGFHQDWNTLIYNLGRNEVRGFMMASALHWLKHFHIDGLRVDAVASMLYRDYSRKAGEWVPNRHGGRENLEAIDFIRHLNAVAAVEAPGALIIAEESTAWPGVSQPVQQGGLGFAYKWNMGWMHDTLHYIQNDPVHRAYHHNEMSFGLIYAYSEHFILPISHDEVVHGKHSLIDKMPGDRWQKFANLRAYLTFMWTHPGKKLLFMGCEFGQWREWNHDHQLDWYLLQYPEHQGVQRLVSDLNRLYRELPSLHEQDCQPQGFQWLIGDDAHNSVYAWLRWSSAGEPLLVVANFTPVPREGYRIGVPFGERWQELLNSDAELYAGSNVGNLGVVTSEQVASHGQPLSLALNLPPLGVLVMKPA
>NZ_CP016634.1|WP_070092703.1|890711_891788_-|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MKRTSNPWRFDAIFCAVSTSLLLATPVETFAFELQEQAPFAGLLQPPAVPQLSLDPVSASGLSLGTLNAFSERMSERHDQAAPDLVASQWAQFFPGGTRPGAQVPAQLEAPSQQLTIGPDLFVRETSDGNVHRAGIFVGHNNLQSSFNGMRRLLGDKQKNAVNLSGESLGVYWSMTHEQGWHVDAVAMGTRIDVNGRGESGQRLDDSGHAMTFSVEGGYPIGLGGGWVIEPQAQLINQQFFPGNRAQEETLQAFDSQPSWSGRVGAKLSGRYNVRGMPIEPYVRTNVWYDFTDSDTVKLDQVDKISSSRYSTTVDLGLGLVARVTPKVALFVSADYSSDVDGNDLNGLIGSLGVRMRW
>NZ_CP016634.1|WP_070092702.1|892118_892913_-|endonuclease/exonuclease/phosphatase-family-protein
MSPEAGSPGFASVSQAPAVHRLRVLTVNTHKGFTAFNRRFILPELREAVRSTQADIVFLQEVLGSHDRHAARYPGWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKYPILEHRNLDVSITGPERRGLLHCILDVPGQRQVHAICVHLSLLESHRQQQLQLLRRLLDSLPADAPVIIAGDFNDWQLRGNRTLGDQRDLHEAFERHHGLLARTYPARLPLLRLDRIYLRNAESHAPQILGHKPWTHLSDHLPLAVEVRL
>NZ_CP016634.1|WP_070092701.1|893052_895206_-|glycogen-debranching-protein-GlgX
MSPRTPKKTRSVAPSRIREGMPFPLGATWDGLGVNFALFSANATKVELCLFDSSGEHELERIELPEYTDEIYHGYLPDAHPGLVYGYRVHGPYAPENGHRFNPNKLLIDPYAKQLVGGLKWSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAFTWGRDQRVQIPWERTILYEAHTRGISMRHPGVPQALRGTFAGLANDELLKHIKDLGVSSIELLPIHAFVNDQHLLHKGLNNYWGYNSIAFFAPHPKYLASGKIAEFKEMVAHLHDAGLELILDVVYNHTAEGNELGPTLSMRGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQLVTDSLRYWAGEMHVDGFRFDLATILGRYHDGYSERHSFLVACRQDPLLSQVKLIAEPWDCGPGGYQVGNFAPGWAEWNDRFRDTVRAFWKGDEGQLADFASRMTASGDLFNNRGRRPYASVNFVTAHDGFTLRDLVSYNDKHNEDNDENNQDGTDNNLSWNCGAEGPTDDPQVNALRMRQMRNFFATLLLAQGTPMIVAGDEFSRTQHGNNNAYCQDSEIGWINWDLDQEGAELLAFVKRLTRLRLAYPVLRRSRFLVGDYNEAIGVKDVTWLAPDGSEMSVEQWEDPHGRCLGMLMDGRAQVSGIARPGGEATLLLIVNAYHDTVPFQLPSVPEGDYWSCLVDTDRPQMRKAQHLAFDTVFEVKGRSLLLMALQREEE
>NZ_CP016634.1|WP_070092700.1|895349_895652_-|DUF2934-domain-containing-protein
MMSADEKRIREFAYQIWESEGKPVGQEERHWEMARKLAEAEALAPKVTPRKKPAAKPKAAADAKTSAEPKAPAEPKVAALPGVKPAAAKKPRTAKKPTAG
>NZ_CP016634.1|WP_070092699.1|895666_898441_-|malto-oligosyltrehalose-synthase
MKPLTATVRLQLHSDFTLDDAVPLVPYFARLGVSHLYASPILKARAGSRHGYDVVDPTQVNPELGGEAALERLVAALRLHGMGLILDTVSNHMAVGGADNPWWQSLLAWGRRSPYAEFFDIQWHSSDPLLAGQLLLPFLGNDYGVALHNGEIPLTFAGDQGLLQVAHYEHRFPICPLDYGHILGQSAHPQVRALAQRFSTLREAADPVTEALPLQAELARLVGEGASLDDALAAFDSRTEAGLKRLHLLLEHQTYRLASWRTAADDINWRRFFDINELGGLRVERAVVFEATHAKLFELIERGLVDGLRIDHIDGLADPRQYCRKLRRRVDGLLARRPVQAAVAHFPIYVEKILGAGERLHLDWRTDGTTGYEFMNQVSLVQHDPAGEAPLTELWSSISERPDFSEEVRQARHLVLNASLAGDCESVAQALLQVARGDLMTRDLTLGAIRRALQALVEHYPVYRTYINACGRPADDEAFFQQALAGARQSLAEADWPLLEHLRHWLGGQPWRQLPRGLPRKHLRHACVRFQQLTAPSAAKAVEDTAFYRSGRLLSRNDVGFEAERFSADAAWFHNEAQQRLRDFPDNLLATATHDHKRGEDCRARLAVLSEHAPWLASRVEHWRELAAPLLQMLNDGLAPSPGDELLLYQTLLGSWPLDLDVKDITALGRYAERVRQWQQKALREAKLRSSWNAPNEAYEQACATYLDELLLRPQNQQLRRSLHDAAQRIACPGALNGLVQCLLRMTTPGVPDLYQGNEYWDLSLVDPDNRRPVDYAARRASLDDSVPLAELLAHWRDGRIKQALIARVLDARQAHPQLFQRGAYLPLTVHGRHADKVLAFARLGEDARAIVVVPRLCSTLLGEASTPLIPAQNWDDTRLILPFALSPATCVGLFSGAAVSPSKELYLNTVLAEFPVNLLIQQS

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Crispr_ID: NZ_CP016634_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016634_2

1604276-1604413

Orphan

Consensus_repeat	Method
CTGTGGGAGCGGGTTTACCCGCGAAGAAAGCACCGCAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016634_2

>merge|NZ_CP016634|2|1604276-1604413|CRISPRCasFinder
CTGTGGGAGCGGGTTTACCCGCGAAGAAAGCACCGCAGAAGCAGCGCCAGCCTGCGATGAAGTCAACGGACAGCGCTGTTGAGAGGTTGGCGCGGACCCTGTGGGAGCGGGTTTACCCGCGAAGAAAGCACCGCAGAA

>NZ_CP016634|2|2|1604276-1604413|CRISPRCasFinder
CTGTGGGAGCGGGTTTACCCGCGAAGAAAGCACCGCAGAA	GCAGCGCCAGCCTGCGATGAAGTCAACGGACAGCGCTGTTGAGAGGTTGGCGCGGACC
CTGTGGGAGCGGGTTTACCCGCGAAGAAAGCACCGCAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016634.1\|WP_070090876.1\|1613811_1615344_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP016634.1\|WP_070090885.1\|1599515_1600277_+\|1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate-dehydrogenase	unknown	unknown	gnl\|CDD\|183772
NZ_CP016634.1\|WP_070090874.1\|1616801_1617938_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP016634.1\|WP_070090887.1\|1597764_1598250_+\|benzoate-1,2-dioxygenase-small-subunit	unknown	unknown	gnl\|CDD\|132276
NZ_CP016634.1\|WP_070090878.1\|1611937_1613020_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_CP016634.1\|WP_070091017.1\|1621516_1622503_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176180
NZ_CP016634.1\|WP_099593249.1\|1603259_1604186_+\|catechol-1,2-dioxygenase	unknown	unknown	gnl\|CDD\|274134
NZ_CP016634.1\|WP_070090881.1\|1604490_1605690_+\|benzoate/H(+)-symporter-BenE-family-transporter	unknown	unknown	gnl\|CDD\|281578
NZ_CP016634.1\|WP_070090888.1\|1595292_1596249_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP016634.1\|WP_070090879.1\|1607155_1611856_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP016634.1\|WP_070090880.1\|1605767_1607018_+\|OprD-family-porin	unknown	unknown	gnl\|CDD\|335381
NZ_CP016634.1\|WP_070090886.1\|1598323_1599337_+\|ring-hydroxylating-dioxygenase-ferredoxin-reductase-family-protein	unknown	unknown	gnl\|CDD\|99805
NZ_CP016634.1\|WP_070090873.1\|1618072_1620403_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP016634.1\|WP_099593251.1\|1615633_1616683_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226355
NZ_CP016634.1\|WP_003256111.1\|1602929_1603220_+\|muconolactone-Delta-isomerase	unknown	unknown	gnl\|CDD\|213786
NZ_CP016634.1\|WP_070090884.1\|1600331_1601660_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NZ_CP016634.1\|WP_070090883.1\|1601689_1602811_+\|muconate-cycloisomerase-family-protein	unknown	unknown	gnl\|CDD\|239434
NZ_CP016634.1\|WP_070090872.1\|1620625_1621501_+\|protein-deglycase-HchA	unknown	unknown	gnl\|CDD\|235228
NZ_CP016634.1\|WP_070091018.1\|1596409_1597768_+\|benzoate-1,2-dioxygenase-large-subunit	unknown	unknown	gnl\|CDD\|132273
NZ_CP016634.1\|WP_070090889.1\|1594218_1594950_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016634.1\|WP_099593251.1\|1615633_1616683_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226355	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms].	4.02204e-96
NZ_CP016634.1\|WP_070090885.1\|1599515_1600277_+\|1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate-dehydrogenase	gnl\|CDD\|183772	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional.	0
NZ_CP016634.1\|WP_070090874.1\|1616801_1617938_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP016634.1\|WP_070090887.1\|1597764_1598250_+\|benzoate-1,2-dioxygenase-small-subunit	gnl\|CDD\|132276	TIGR03232, benzo_1_2_benB, benzoate 1,2-dioxygenase, small subunit. Benzoate 1,2-dioxygenase (EC 1.14.12.10) belongs to the larger family of aromatic ring-hydroxylating dioxygenases. Members of this family should all act on benzoate, but several have additional known activities on various benozate analogs. Some members actually may be named more suitably according to such alternate an activity, such as 2-chlorobenzoate 1,2-dioxygenase (1.14.12.13).	2.23572e-104
NZ_CP016634.1\|WP_070090878.1\|1611937_1613020_+\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	1.59717e-30
NZ_CP016634.1\|WP_070091017.1\|1621516_1622503_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.1946e-175
NZ_CP016634.1\|WP_099593249.1\|1603259_1604186_+\|catechol-1,2-dioxygenase	gnl\|CDD\|274134	TIGR02439, Catechol_12-dioxygenase_1, catechol 1,2-dioxygenase, proteobacterial. Members of this family known so far are catechol 1,2-dioxygenases of the Proteobacteria. They are distinct from catechol 1,2-dioxygenases and chlorocatechol 1,2-dioxygenases of the Actinobacteria, which are quite similar to each other and resolved by separate models. This enzyme catalyzes intradiol cleavage in which catechol + O2 becomes cis,cis-muconate. Catechol is an intermediate in the catabolism of many different aromatic compounds, as is the alternative intermediate protocatechuate. In Acinetobacter lwoffii, two isozymes are present with abilities, differing somewhat, to act on catechol analogs 3-methylcatechol, 4-methylcatechol, 4-methoxycatechol, and 4-chlorocatechol. [Energy metabolism, Other].	5.50211e-176
NZ_CP016634.1\|WP_070090881.1\|1604490_1605690_+\|benzoate/H(+)-symporter-BenE-family-transporter	gnl\|CDD\|281578	pfam03594, BenE, Benzoate membrane transport protein.	1.43703e-146
NZ_CP016634.1\|WP_070090888.1\|1595292_1596249_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	9.26588e-23
NZ_CP016634.1\|WP_070090879.1\|1607155_1611856_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	6.49527e-06
NZ_CP016634.1\|WP_070090880.1\|1605767_1607018_+\|OprD-family-porin	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	0
NZ_CP016634.1\|WP_070090886.1\|1598323_1599337_+\|ring-hydroxylating-dioxygenase-ferredoxin-reductase-family-protein	gnl\|CDD\|99805	cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain. Oxygenases oxidize hydrocarbons using dioxygen as the oxidant. As a Class I bacterial dioxygenases, benzoate dioxygenase like proteins combine an [2Fe-2S] cluster containing N-terminal ferredoxin at the end fused to an FAD/NADP(P) domain. In dioxygenase FAD/NAD(P) binding domain, the reductase transfers 2 electrons from NAD(P)H to the oxygenase which insert into an aromatic substrate, an initial step in microbial aerobic degradation of aromatic rings. Flavin oxidoreductases use flavins as substrates, unlike flavoenzymes which have a flavin prosthetic group.	1.28577e-142
NZ_CP016634.1\|WP_070090873.1\|1618072_1620403_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.3281e-96
NZ_CP016634.1\|WP_003256111.1\|1602929_1603220_+\|muconolactone-Delta-isomerase	gnl\|CDD\|213786	TIGR03221, muco_delta, muconolactone delta-isomerase. Members of this protein family are muconolactone delta-isomerase (EC 5.3.3.4), the CatC protein of the ortho cleavage pathway for metabolizing aromatic compounds by way of catechol. [Energy metabolism, Other].	1.4753e-54
NZ_CP016634.1\|WP_070090884.1\|1600331_1601660_+\|MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.46254e-99
NZ_CP016634.1\|WP_070090876.1\|1613811_1615344_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	3.70961e-45
NZ_CP016634.1\|WP_070090872.1\|1620625_1621501_+\|protein-deglycase-HchA	gnl\|CDD\|235228	PRK04155, PRK04155, protein deglycase HchA.	0
NZ_CP016634.1\|WP_070091018.1\|1596409_1597768_+\|benzoate-1,2-dioxygenase-large-subunit	gnl\|CDD\|132273	TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenase, large subunit. Benzoate 1,2-dioxygenase (EC 1.14.12.10) belongs to the larger family of aromatic ring-hydroxylating dioxygenases. Members of this family all act on benzoate, but may have additional activities on various benozate analogs. This model describes the large subunit. Between the trusted and noise cutoffs are similar enzymes, likely to act on benzoate but perhaps best identified according to some other activity, such as 2-chlorobenzoate 1,2-dioxygenase (1.14.12.13). [Energy metabolism, Other].	0
NZ_CP016634.1\|WP_070090883.1\|1601689_1602811_+\|muconate-cycloisomerase-family-protein	gnl\|CDD\|239434	cd03318, MLE, Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.	0

>NZ_CP016634.1|WP_099593249.1|1603259_1604186_+|catechol-1,2-dioxygenase
MTVKISHTAKIQAFFQEAAGYGNDDGNPRIKRIIQRVLQDTARLIEDLEITEDEFWLAVDYLNRLGGRGEAGLLVAGLGLEHFLDLLQDAKDTEVGLTGGTPRTIEGPLYVAGAPIAQGEVRMDDGSEEGVATVMFLEGQVLDPQGQPVAGATVDLWHANTRGTYSFFDQSQSQYNLRRRIVTDAQGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHIHCFISAPGYRHLTTQINLAGDQYLWDDFAYATREGLVGEITFREDGARGVQGRYAELSFDFQLQKAVDSEAEQRSSRPRALQQA
>NZ_CP016634.1|WP_003256111.1|1602929_1603220_+|muconolactone-Delta-isomerase
MLFHVKMTVKLPVDMDPAKAAQLKADEKELAQRLQREGTWRHLWRIAGHYANYSVFDVPSVEALHDTLMQLPLFPYMDIEVDGLCRHPSSIHSDDR
>NZ_CP016634.1|WP_070090883.1|1601689_1602811_+|muconate-cycloisomerase-family-protein
MTSPTIDRLEAIIVDLPTIRPHKLAMHTMQQQTLVILRLRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLPADNINAAMLKLDKLAKGNTFAKSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIAEAEHMLEVRRHRVFKLKIGANPVEQDLKHVVAIKRELGDRASVRVDVNQHWDESQAIRACQVLGDNGIDLIEQPISRINRAGQVRLNQRSPAPIMADESIESVEDAFSLAADGAASIFALKIAKNGGPRAVLRTAQIAEAAGIALYGGTMLEGSIGTLASAHAFLTLRQLTWGTELFGPLLLTEEIVAQAPQYRDFQLHVPRTPGLGLTLDEARLARFARH
>NZ_CP016634.1|WP_070090884.1|1600331_1601660_+|MFS-transporter
MRTLDVQAIIDNARFTPFHWMVMAWCGLLLIFDGYDLFIYGVVLPVIMKAWGLTPLQAGALGSYALFGMMFGALAFGSLADRIGRKKGIALCFALFSGATILNGFATSPGEFGIYRFIAGLGCGGLMPNAVALMNEYAPKRLRSTLVAIMFSGYSLGGMLSAGVGIYLLPRFGWESMFFAAALPLLLLPVILYYLPESIGFLVRQGRVKEAGALLKRLDPDCDVQADDVLQVVERKAKGASVAALFREGLAVRTLALWLAFFCCLLMVYALSSWLPKLMANAGYSLGSSLSFLLVLNFGGMAGAIFGGWLGDRYNLVKVKVAFFLAAALSISLLGVNSPMPVLYGLIFIAGATTIGTQILLYAGAAQLYGLSVRSTGLGWASGIGRNGAIVGPLLGGALMGINLPLQLNFIAFAIPGAIAALAMAVHLASGRRHGLVAPAQA
>NZ_CP016634.1|WP_070090885.1|1599515_1600277_+|1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate-dehydrogenase
MNNRFQGKVALVTGAAQGIGRGVCWRLKAEGAQVVAVDRSELVHELAGEGVLTLIANLEQHTDCAQVMAQAVATFGRLDILINNVGGTIWAKPFEHYDIEQIEAEVRRSLFPTLWCCHAALPYMLERGSGAIVNVSSIATRGVNRVPYGAAKGGVNALTACLAFETAGRGVRVNATAPGGTEAPPRRIPRNSAEQSEQEKTWYQQIVDQTLSSSLMKRYGTIDEQVGAILFLASDEASYITGVTLPVGGGDLG
>NZ_CP016634.1|WP_070090886.1|1598323_1599337_+|ring-hydroxylating-dioxygenase-ferredoxin-reductase-family-protein
MSFQIALNFEDGVTRFIQADGHETVADAAYRQGINIPLDCRDGACGTCKCQAEAGRYDLGDNFIEDALNEDEIAQGFVLTCQMRALSDCVVRIPASSQLCKTEQASFEAAISDVRQLSESTIALSIKGEALNRLAFLPGQYVNLKVPGSEQTRAYSFSSLQKDGEVSFLIRNVPGGLMSSFLTSLAKAGDQMTLAGPLGSFYLRAIQRPLLLLAGGTGLAPFTAMLEKIAEQGSEHPLHLIYGVTNDFDLVELDRLQALAARIPNFTFSACVANPDSQYPHKGYVTQHIEPRHLNDGDVDVYLCGPPPMVEAVSQYIREQGITPANFYYEKFAAAAA
>NZ_CP016634.1|WP_070090887.1|1597764_1598250_+|benzoate-1,2-dioxygenase-small-subunit
MSIYETVRDFLYREARYLDDAQWDQWLELYAADATFWMPSWDDDDTLTEDPQSEISLIWYGNRGGLEDRVFRIKTERSSATVPDTRTSHNLSNIEIVEQGHGQCRVRFNWHTLSFRYKTTDSYFGTSFYTLDLRGEQPLILAKKVVLKNDYVRQVIDIYHI
>NZ_CP016634.1|WP_070091018.1|1596409_1597768_+|benzoate-1,2-dioxygenase-large-subunit
MSLGFDYLNAMLEDDREKGVYRCKREMFTDPRLFDLEMKHIFEGNWIYLAHESQIPEKNDFLTLTMGRQPIFIARNKDGELNAFLNACSHRGAMLCRHKRGNRSSYTCPFHGWTFNNSGKLLKVKDPANAGYPDSFNCDGSHDLTKVARFESYRGFLFGSLNADVKPLREHLGESAKIIDMIVDQSPEGLEVLRGSSSYIYEGNWKLTAENGADGYHVSSVHWNYAATQNQRKQREAGDEIKTMSAGAWAKQGGGFYSFDHGHLLLWTRWANPEDRPAYERREQLAADFGQARADWMIENSRNLCLYPNVYLMDQFSSQIRVARPISVNKTEITIYCIAPKGESAEARAKRIRQYEDFFNVSGMATPDDLEEFRSCQTGYGAGTGWNDMSRGATHWVEGADEAAKQIELQPLLSGVRTEDEGLFVLQHKYWQDTMLKALEQEQRLIPVEAVQ
>NZ_CP016634.1|WP_070090888.1|1595292_1596249_+|AraC-family-transcriptional-regulator
MESRLLSERSSVFHRADPYVVSDYVNRHVGQHCIGLSRTTHPQSSLSHRKMAELDLCRISYGGSVRVTSPALETIFHLQILLNGNCLWRGHQREHYLVPGELLLINPDEPVDLTYSEDCEKFILKVPTHLLDSICDEQRWQRPSGGVRFLRNHYRLEELDGFVNLLSMVCHEAEVSDSLPRVQGHYSQIVASKLLTLMSTNVQREPLGAAGASLERILEHIDRHLKLELTAEGLAEQACMSVRSLYALFDRHLGTTPKQYIRQRKLEQVHACLRDASCSVRNVTELAMDYGFLHLGRFSEHYRQRFGELPSETLKRRN
>NZ_CP016634.1|WP_070090889.1|1594218_1594950_+|hypothetical-protein
MVVPLFKPFYRLLLAATLIALCACTQEQGRDILTQFGDGKPSELFQTSVDRMATIAMRDNLQSLYLLMNKLYQRNPNQWKQSGYLDAATAERQIRLAIEQRQPLAQLGDRRDLAALSYALSPEFRGDRVGAFIYAIGSMLITAHGGRTEFYMTDTIDPLFVNNAARNIEKATWMLSQRQDANGVLLLFSNEISEEGSNLSFAVEFGKIVARLDLLAQMLDERYRRIGLNYAQSLLLLNFLPVQ
>NZ_CP016634.1|WP_070090881.1|1604490_1605690_+|benzoate/H(+)-symporter-BenE-family-transporter
MKDLFNDCSVSAVVAGMIATMISYAGPLVIIFHAAEAGGLSHDVLSSWVWAVSMGSAVLGAWLSLRYRVPVVIAWSIPGSALLVTALPELGLEQAIGAYLVANLVLLVIGISGAFDRIIAHLPGSIAAGMQAGILFSFGTEVFRALPVQPTLVLAMFATYVLMRVRQPRYAVAAVLLVGAFVTVLSGQFRSDALVLELASPRLIAPQFSVTALFSLALPLVLVALTGQFMPGMAVLRNAGYAVPASPLISTSALGGALLAPFGCHGLNLAAVTASLCTGREAHEDPRRRYVAAVSGSVLYLLLGIAGATLMSLFAAFPAALIAALAGLALYGAISEALARSLSEPAERDAGLFTFLVTASGVSFLGLSAAFWGLLFGLAAHALPHLRRPRAHTALRRAR
>NZ_CP016634.1|WP_070090880.1|1605767_1607018_+|OprD-family-porin
MNHTPCVALGITLLSQPLLASENGFFEDAKASLSARNYYFSRDYSDIVGANQQSKAEEWAQGFILDFKSGYTPGTVGFGMDALGLLGIKLDSSPDRVNTGLLPVHSDGRAADEYSRLAPTFKARLSKTELRVGELQPNLPVLTFSDIRLLPPTYQGVNLSSTELAGLTLQAGHLTSSHLRNEAGDDKMIAMLGHVPMRQAQSDAFNYVGGDYAFNDNQSSASLWYGQLEDIYEQGFVGLKHSKPVGDWVLSANLGYFTAREDGDALLGNIDNQAFFSLFTVRQGGHSFHVGYQGIYGDSPFPRVFANISPLGNEVPTYEFAYTDERSYQARYDYNFAALSIPGLTATVRYITGNNVDTGQGYEGKDRERDIDLGYAVQGGLFKGLGVRVRNAMARSNYRSDIDENRLILVYTWQLF
>NZ_CP016634.1|WP_070090879.1|1607155_1611856_+|hypothetical-protein
MPHVLDHKHAVAMQFASRPTLRQVAGQQIMKVMIERYPLIASQRPELTSAEAFKVMIPKPGGFWSVRSFVDYVLQAWLEGERLDFSFVDGLDYRLSLEVPSRFYAIKDPRKTADGDRIKLEDLGDALNELLELFEELFCQAQVDYWREDANAGVSRDRWLQQTVKSVLLENLALQNLDAEQQTCIRDLLAIGAQSAGVCIVEVHMKKGGQAFSRLLPNLLVMAENDARKVFLWCAPSSVIQAFDSLGAFAQALQDELADAYDFDTLTWDRHELAGDVFGQWAAAMLEALLAAARRLQHTQLTNVDEAEQVLAALTDPSQYFIEGYRVATDTHLSLPSEVQNASHEDSFADQCALFDLALAQARSQGVSALADVLSLHAYASQRLREQLLKDHPIDANYFPDDLDLTLTMAHGTPGGAGVGVGDGSVERRSMTLTEFAIGNLSSLQGAQLTGITHREGQLIMDWMTIDYAKSLVQRVDIGAHYPTYVAKCLDDPATREQRVERFAREWRCGLLFSALSAKRDGSLDEEALQCVVDYCRGDVDETLPATMLMPLAFKREPEAKAEDRVGGMYVLFCAQPSRVLLYRPLYADAPLMMFSSLDTMMQAIRQKGSLQDSVLQWLAADARPVYAHGGFHEPHLIRPILDTSLTLAPVKPVKFAPQYWRIDVDAKLYQANRDLLVELADRQSVSNAESRWAILAQGAWLLFDVATLFLRGPVATVAWVIQAINAVSNDVAALSSASAFSRSSAVVDLLLNASMALMHQHLPTQASTVTPRTRQAPAFAQHRLPQPTVQVASIERVQGKVGLPGSLGRLNTQLDFSWRGAHGLNVLPAERRQALLAMRSSVSLGKQPIITTGAHQGLYEIAGRHYLSFAGDVYQAQVSEDGIRIMDPAGGEGPQMTFIEESWRIDHALQLRGGMPKSRVQKLRENNEALVQALRLQDQSLTEKHNNLTTAVEKHRKLLSEKDQRIEHLEAMADRDALTERDLKLTRSLRKQINQTILRELKELIENGVEHDQVLSKLADMRLSIGLSAMVGEAEDLERASRVVIDLRNATRQELIENLSAFYDEMAQMINTEDLDSLAKDVVVKPESKEEVRQYESFRKRLEQIIEWETQLIEMSRVFDLQLSDTLKDTSIVFKGSRGERVNKDGKLREIIERRRLSAIDLEFQQLMDLAEASVDRLADVDESTLTQYSDYLANDALKSAGNAHGDLPGSGVSLTEQIEVLTGVVEAYQEARVLADYLESCGGPAVKLSWLQRYVSSLENIMSLAERDLAQAVRELELEEPPVPRTSTYAGRGGRRHVVRTNRGRSVLGEEVQVGDTSVMQQRDYRTQAVIKTFHKTGEQWVESTAQPSTGGERPVPSADPRIVRKQAQTLIDQVDSVVKLARLYVKTDEPTGLSTVIDGHLDKLKQAQAGLPRLTPEDELLEGLTEGATRLKSVKRDLLTGMYLATSHPTADSLRFLFEQRAITVLRAGQRKALAANDYLDVYEIRRRIRSGEQEGEGLWEAHFHYPSATTPARQFSRGHLKLWTQRKLGRKAQLQAAASGRDFLAIYRGELRLEQIEGIIPF
>NZ_CP016634.1|WP_070090878.1|1611937_1613020_+|metal-dependent-hydrolase
MDSLTQAVLGAALQGAVLGRIQGRRALLYGAALGTLPDLDVLIRYADPVSQMTYHRGFSHSIFVLTALAAVLAWLVSTIARRRWPDKGYRLPRLFLAFWLALVTHPILDAFTVYGTQLFWPLNLTPQSWAAVFIIDPVYTLPLLGAVLFAAFKGLGGRAIPVLVVALAFSTAYLGFGLAGRVAAEQRFAQALDQQGIAVTQVRAVPIAFNSLVWRVLAKTPDGEYYEGISSAFDRAPPEMQRQPRNLEAAQVLRGVPLHERLRWFTDDWLRYDVVGDALVVTDLRMGIPGNYTFRFQMASRDGAGRWSVVTPTLWLGNGVGSMLNGEDLALIWRRIVQQQPALPLAAWTQKYLGQSEAAR
>NZ_CP016634.1|WP_070090876.1|1613811_1615344_-|FAD-dependent-oxidoreductase
MTQHSVARLEQLDERTPLRVQAGSEEVILIRQGDLVHAYQAHCPHEGAPLEEGALCGGLLVCPWHKAAFAVDEGAVCEPPALADLRRYPVQVKNGDILVDDQPLPKVNPPRHSDARCFAVIGAGAAGCAAVATLLGHGFGGRLVWIDQEQHPAYDRTSLSKFVIAGQMAPDEVPALLEPDALRQGHLERWHAKVRALDVAKRQIMLADGKRLEYDAALVATGGKPKRPDLPGAQLPGVCLLRSRDDAAHLLDAAEPGQPVVIVGDGFIGLEAASALRKYGAQVHVVTRHEIPLARQLGERIGRTLRELHERKGVVFHGPTDVERFEGTDHVQAVVLANGERLDTALVLLGVGVKPATGFVHGLDLAEDQSLPVDAELHAAEGLWAAGDIATFPLVGRPVRIEHWRLAEQHGVIAAANMLGEQRRYDDVPFFWTYQHGRTYEVLGHGQHWNRIEYVGEPEKGDFIALQCIDDQVEAVIAKGYARAMAVMSQRMKRPLTSREARELIDAWPG
>NZ_CP016634.1|WP_099593251.1|1615633_1616683_+|helix-turn-helix-domain-containing-protein
MAILPCNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRIVELDVDAAKCLKGVQPGVNLPLMLDDRLIGVLGLTGDPQQLRTYGELVRMTAEMLLAQRHLQVEHQWRRQRCDDLLALLLGGSSDSPRLLDEAQQLGLKPQLARVPCLFELEPGPSAQALSGWLMSRFPDSWCISPARHSLLWCRPAGVALDEQRLVERLQRHGWQVERLAMGNVAQSLEQLRRGYRRVRDLLAYGREVLPQERLLSLSRYRLPALLWRHRNDDSLDELLEPLQRIRAKDASGQLLATLRAWCAHDGQSQACADALGIHRNSLRYRLERIAEVSEVDPLRLEGMLSLYLGLQLLPAQ
>NZ_CP016634.1|WP_070090874.1|1616801_1617938_+|glycerate-kinase
MKVVIAPDSFKDSLDAAGVARAIAAGLAEVWPDAERVECPMADGGEGTMDAILAASHGELRRQVVRGPLGQSVEAGWGWLAHSRTAIIEMAQASGLQLVPTDQRDACRSSTWGTGELIAAALAAGATRIVLAIGGSATNDGGSGMLRALGLRLLDADGQDLEEGGLALGQLARIDASDLDPRLAEVQVEVAADVDNPLCGPNGASAIFGPQKGASPAQVQALDQALGYFADLCAQLLGEDVREFPGCGAAGGMGFAAKAFMGAQFRPGVEVVAELAGLDALVQGADLVITGEGRFDAQTLRGKTPMGVARVAKRHGVPVVVLAGTLGEGYQQLYAHGIDAAFALASGPMSLEQACAQATQLLQTRASDIARLWQAARG
>NZ_CP016634.1|WP_070090873.1|1618072_1620403_-|EAL-domain-containing-protein
MIRRFLSSAGLLPLLILTLCAITLAFLWGLHVTQKAASRQDALSAKAAEHMNLASIVAQNLRQLVDRAQAVGRVTQDDMKSLRQGNLSLARILAEDPAFKRMSLYDRQGRLLCSSHADEPQALPQDWLDQLKVRVSHDGFKPFMPHIAPADTPPPRPSWRLPFILPLTDVRGREIDSILVVQLDVGYLAVLLQHIDLGRTGLMRLLQDDGQERLRIDSNGVVMAGDRLMPNLPETGDEAGLLTQYSVEGAYQSLYRRVANRGFSVVVSQQHDEILAPSALTYARQFWLNLSMTLMILASLAWSLRLLGKRQEAFSALEHAQQVNQQLIGRLEDEHRRSSHAAATDHLSGLHNRRQFVEVATHALARQRGRRQLMAILFIDMDRFKSINDSLGHKIGDLLLQAVAGRIQRLLDPGDEASRFGGDEFVVLLAGERDEEQIDTWVRELVGKLSATYALDGKEVNTSPSVGVSICPRDGQDIDTLIRCADAAMYSAKQAGRAQYRFFDPSLNVSDIQAFTLEQAFGIALAERQFLLHYQPQIRLDTLKVQGYEALVRWNHPEFGLLYPDRFIDMAERSGFIVELGWEVLRLACEELARWQAQGRDARLAVNVSALQLRQTDFSERLLAELCHHAIDAHQLELEITETTVLDPEGTALEHLHRLRRAGLGISLDDFGRGYAGFAHLQSLPLTKLKIDRALIAPLCNSHDDSPIVSSTIILAKRLGLEVIAEGVETREQVVCLKLAGCDTAQGYHFSRPLSPVQLLEYPPFSGARESACCNL
>NZ_CP016634.1|WP_070090872.1|1620625_1621501_+|protein-deglycase-HchA
MTHSHDDKRPTPDPAEDNAFFPSPYSLSQFTSPKSDLSGADYPRPYTGGRWKVLMIGADERYLLTDNGTMFSTGNHPVETLLPMYHLDKAGFAFDVATLSGNPVKFEFWAMPSEDAEVKGLYERYRDAFKRPLKLAEVIERALGPDSDYIGVFIPGGHGALIGLPESQDVKQVLQWAAKQDKFVISLCHGPAAFLAAGLGETRESCIYNGYRICAFPDDLDAKTPDIGYMPGHLTWKFGEQLKALGVEIVNQDISGATLQDRKLLTGDSPLAGNALGKLAAAALLKEVGAG
>NZ_CP016634.1|WP_070091017.1|1621516_1622503_-|zinc-binding-dehydrogenase
MTAIEITQPGGPDVLQPSRRAIPEPAPREVLIKVRAAGVNGPDLLQRKGLYDPPAGASDIPGLEIAGDVVALGSEVKGFAVGDPVIALVTGGGYAEYAVADERTTLHLPEGLTMVEAAALPETFMTVWVNLFQRGGFKAGESVLIHGGVSGIGTTATMLAKALGASRIFTTVANPKQQATSQALGADVAIDYNRQDFVEQVQRHTEGQGVDVIVDIIAGDYVARNFQAAAMNGRIVQIGVIKGPAPQLDLFPMLVKRLTHIGSTLRARSADDKAQIIADLQRHVWPHVRSGAVKPLIFRTFALADAAQAHALMENRQHMGKVVLTVDA

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Crispr_ID: NZ_CP016634_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016634_3

2747654-2747756

Orphan

Consensus_repeat	Method
GCACAACGCTTCGCCGAAGATGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016634_3

>merge|NZ_CP016634|3|2747654-2747756|CRISPRCasFinder
GCACAACGCTTCGCCGAAGATGGCTACGACCGCACTGGTGCACAACGCTTCGCCGAAGATGGCTACGACCGCACTGGCGCACAACGCTTCGCCGAAGATGGCT

>NZ_CP016634|3|3|2747654-2747756|CRISPRCasFinder
GCACAACGCTTCGCCGAAGATGGCT	ACGACCGCACTGGTGCACAACGCTTCGCCGAAGATGGCTACGACCGCACTGGC
GCACAACGCTTCGCCGAAGATGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016634.1\|WP_070093790.1\|2754737_2755643_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP016634.1\|WP_070093804.1\|2737007_2738225_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379330
NZ_CP016634.1\|WP_070093805.1\|2735957_2736974_+\|DUF4917-family-protein	unknown	unknown	gnl\|CDD\|374458
NZ_CP016634.1\|WP_070093803.1\|2738325_2738943_-\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|226285
NZ_CP016634.1\|WP_070093799.1\|2746419_2747169_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227049
NZ_CP016634.1\|WP_070093797.1\|2747945_2748551_+\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP016634.1\|WP_070093802.1\|2741639_2743397_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NZ_CP016634.1\|WP_070093834.1\|2748551_2748785_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016634.1\|WP_070093789.1\|2755673_2756543_-\|oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|225311
NZ_CP016634.1\|WP_070093800.1\|2744988_2746308_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340925
NZ_CP016634.1\|WP_070093801.1\|2743390_2744725_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP016634.1\|WP_070093794.1\|2750489_2752127_-\|5-guanidino-2-oxopentanoate-decarboxylase	unknown	unknown	gnl\|CDD\|236041
NZ_CP016634.1\|WP_070093835.1\|2739170_2741462_+\|beta-glucosidase-BglX	unknown	unknown	gnl\|CDD\|185053
NZ_CP016634.1\|WP_070093792.1\|2753118_2753733_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225462
NZ_CP016634.1\|WP_070093791.1\|2753760_2754636_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293825
NZ_CP016634.1\|WP_070093796.1\|2748897_2749191_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|367760
NZ_CP016634.1\|WP_070093795.1\|2749392_2750310_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377694
NZ_CP016634.1\|WP_099593608.1\|2752239_2753148_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP016634.1\|WP_070093807.1\|2732138_2733107_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368366
NZ_CP016634.1\|WP_070093806.1\|2734127_2735831_+\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732

Protein	Function_ID	Function_description	E-value
NZ_CP016634.1\|WP_070093789.1\|2755673_2756543_-\|oxaloacetate-decarboxylase	gnl\|CDD\|225311	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism].	1.24162e-81
NZ_CP016634.1\|WP_070093804.1\|2737007_2738225_-\|SAM-dependent-methyltransferase	gnl\|CDD\|379330	pfam13679, Methyltransf_32, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.39208e-32
NZ_CP016634.1\|WP_070093805.1\|2735957_2736974_+\|DUF4917-family-protein	gnl\|CDD\|374458	pfam16263, DUF4917, Domain of unknown function (DUF4917). This family consists of uncharacterized proteins around 340 residues in length and is mainly found in various Burkholderia and Brucella species. The function of this family is unknown.	1.87486e-32
NZ_CP016634.1\|WP_070093803.1\|2738325_2738943_-\|TPM-domain-containing-protein	gnl\|CDD\|226285	COG3762, COG3762, Predicted membrane protein [Function unknown].	1.19281e-35
NZ_CP016634.1\|WP_070093799.1\|2746419_2747169_-\|hypothetical-protein	gnl\|CDD\|227049	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown].	1.33874e-92
NZ_CP016634.1\|WP_070093797.1\|2747945_2748551_+\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	4.66851e-40
NZ_CP016634.1\|WP_070093802.1\|2741639_2743397_+\|sensor-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	0
NZ_CP016634.1\|WP_070093790.1\|2754737_2755643_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.50796e-82
NZ_CP016634.1\|WP_070093800.1\|2744988_2746308_+\|MFS-transporter	gnl\|CDD\|340925	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters. This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0
NZ_CP016634.1\|WP_070093801.1\|2743390_2744725_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP016634.1\|WP_070093794.1\|2750489_2752127_-\|5-guanidino-2-oxopentanoate-decarboxylase	gnl\|CDD\|236041	PRK07524, PRK07524, 5-guanidino-2-oxopentanoate decarboxylase.	0
NZ_CP016634.1\|WP_070093835.1\|2739170_2741462_+\|beta-glucosidase-BglX	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	0
NZ_CP016634.1\|WP_070093792.1\|2753118_2753733_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	2.10908e-88
NZ_CP016634.1\|WP_070093791.1\|2753760_2754636_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293825	cd07739, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	7.52861e-99
NZ_CP016634.1\|WP_070093796.1\|2748897_2749191_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	1.19698e-12
NZ_CP016634.1\|WP_070093795.1\|2749392_2750310_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|377694	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus. This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain.	1.25546e-60
NZ_CP016634.1\|WP_099593608.1\|2752239_2753148_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	6.01579e-80
NZ_CP016634.1\|WP_070093807.1\|2732138_2733107_-\|hypothetical-protein	gnl\|CDD\|368366	pfam05277, DUF726, Protein of unknown function (DUF726). This family consists of several uncharacterized eukaryotic proteins.	0.00265432
NZ_CP016634.1\|WP_070093806.1\|2734127_2735831_+\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	5.48416e-138

>NZ_CP016634.1|WP_070093799.1|2746419_2747169_-|hypothetical-protein
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNIGYAMSSLLLISVFLVTLVTQLYSRRYNPWLYWLVILSTSTAGTTMSDFMDRTLGLGYAAGSAILIGILLLTFALWRLSGNPLDVTRIKHRGGELFYWVAILFSNTLGTALGDFLADDSGLGFAGGALLIGSTIALVVLARYWTRIPGVVLFWVAFVLTRPFGATLGDFLTKPHEKGGMDFGTVGSSAVLGGVLLVLILMASLYNREPRPALEAS
>NZ_CP016634.1|WP_070093800.1|2744988_2746308_+|MFS-transporter
MDNASTLPTGAAIAPATEKTTASRLKSIFSGSIGNMVEWYDWYVYAAFSLYFAKAFFPAGDTTAQLLNTAAIFAVGFLMRPIGGWLMGLYADRKGRKAALMASVLLMCAGSLVIALTPGYETIGVAAPILLVLARLMQGLSVGGEYGTSATYLSEMASKDRRGFFSSFQYVTLISGQLIALAVLIILQQTLTTEQLYAWGWRVPFVIGALCAVVALYLRRGMEETSSFTKKEKSKESLMRTLLRHPKELLTVVGLTMGGTLAFYTYTTYMQKYLVNTVGMSISDSTTISAATLFLFMCLQPVIGGLSDKIGRRPILIAFGVLGTLFTVPILSTLHTVQTWWGAFFLIMAALIIVSGYTSINAVVKAELFPTEIRALGVGLPYALTVSIFGGTAEYVALWFKSNGMETGFYWYVTGCIACSLLVYATMKDTAKHSRITTD
>NZ_CP016634.1|WP_070093801.1|2743390_2744725_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MLNSVIVVDDEASIRTAVEQWLSLSGFSVQLFTRAEECLAQLPEHFPGVVISDVRMPGMDGLQLLERLQVLDPDLPVILLTGHGDVPMAVEAMRNGAYDFLEKPFTPQTLLSSLRRALEKRQLVLENRRLHQQADLKARLENTLLGMSQGLQSLRRQVLDLAGLPVNVLIRGETGSGKERVARCLHDFGPRADKPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYANGGTVFLDEIESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFREDLAYRLNVAELRLAPLRERREDIPLLFEHFARAAAERLGRTAPPVSGGQLAQLLAHDWPGNVRELANAAERHALGLGAPRGEANAAGQSLAGQMEAFEAQCLRAALRQYKGEIKAVMEALQLPRRTLNEKMQRHGLAREDFLDRE
>NZ_CP016634.1|WP_070093802.1|2741639_2743397_+|sensor-histidine-kinase
MLFSFRTLRLALIILVIVIGTALSAGWAMHQAKRQSMETDARRASQQLTLYANALHTLIERYRALPAVLALDPELIAALRGPVTEQVQDALNHKLERINGAANSSTLELLDRTGLAIAASNWRLPTTYVGSNYGFRPYFKQTRSQGSGRFYAVGVTSGVPGYFLANAVTDEQGRFLGAMVVKLEFPELEREWRQGSDILLVSDARGITFIANQEGWRYRELQPISAADRADLAETRQYDKQPLVPLQHQVLTNFGANSHLSRVQGPEGSIDYLWESLPLDAEGWTLHLLRKPQVSAEGRNAALTAAAIWLSLVFAALFVSQRLRLARLRKRSRDELKRLVEERTRELRTAQEGLVQSAKLAALGQMSAALAHEINQPLTTQRMQLETLRLLLDHGRYDEARQALEPLEQMLTRMAALTGHLKTFARNSPGGLRERLDLATVVDQALHLLDARIRGEGVEVALYLARPAWVRGDAIRLEQVLINLLRNALDAMVDKRYKRLEIRIEADDGHWRLSVLDSGGGIPQADLARVFDPFFTTKPVGEGLGLGLAISYGIVHEAGGQLQAENLPGGARLSLTLPRDLEPVC
>NZ_CP016634.1|WP_070093835.1|2739170_2741462_+|beta-glucosidase-BglX
MMKLSLLGLAMGLASQAALAATSAPPLQDKQAFIEHLIGQMTEAEKIGQLRLISIGPEMPREKIREEIAAGRIGGTFNSRTAPENRPMQDAAMRSRLKIPMFFAYDTIHGERTIFPIGLGLAATWDMDAVAKVGRTSAIEAAADSLDMTFGPMVDIARDPRWGRTSEGFGEDTYLTSKIGQVMVKAFQGTSPAEPDSIMAIVKHFALYGAVEGGRDYNTVDMSLPKMYNDYLPPYRASLDAGAGGVMVALNSINGVPATSNTWLMNDLLRKEWGFKGVTISDHGAIQELIRHGVAQDGREAAKLAIKAGIDMSMNDTLYGEELPGLLKSGEVTQAELNQAVREVLGAKYDMGLFKDPYVRIGKAENDVKDYYADSRLHRAAARDVARRSLVLLENREQTLPLKKAGTIALVGPLADAPIDMMGSWAADGKPEHSVTVREGLRRALEGKAKLVYAKGSNVTGDKAIFDYLNFLNFAAPEIVDDPRPAAVLIDEAVKAAKQSDVVVAVVGESRGMSHESSSRTTLEIPAVQRDLIKALKATGKPLVLVLMNGRPLSLAWEREQADALLETWFSGTEGGNAIADVLFGDYNPSGKLAITFPRSVGQIPMYYNHMRIGRPYTPGKPGNYTSQYFEEPNGPLYPFGYGLSYSSFELSGLALGSQQLKRGGTLEAKVTVKNTGKRDGETVVQLYVQDVSASMSRPVKELKNFQKLMLKAGESRTLTFHISEDDLKFYNGQLQRVAEPGQFNVQVGLDSEAVQQQSFELL
>NZ_CP016634.1|WP_070093803.1|2738325_2738943_-|TPM-domain-containing-protein
MTVFNEYEQRQIAEAIARAEQRTDAELVTVLARRADDYAYLPLLWAALLALAIPGLAHLAMGWPDVRGLLVVQVLTFVGLCLLLRNPRLASRLVPRLLRQRRASGLARQQFLELNLQHTAGATGVLIFVSEAERHVEILVDEGIARHLPEQPWEAIIARFTEQVCQGQTLQGFVDCIEACGELLSEHVPPTFARNELPNRLVILD
>NZ_CP016634.1|WP_070093804.1|2737007_2738225_-|SAM-dependent-methyltransferase
MSATPSATSAPDARAQFLALLADALQAGTLAKLVLARHVGADQTLQRIIAKPLVVKGQPCLSLVYRHQTRDITRNLPLEQAQALVAELLPESFRNAHLFTAEGEVQLGFSKKGKPMLQRHVAQPAREQAAVAHDREKKRYLELSRPFLRDLGVTDAQGALIPSMSRKWKQINKFIEVFDHALASAPLAADQALRVADFGSGKGYLTFAMHDYLRNSLSREAQVTGVELRPDMVELCNAAAAKLEHPGLEFQCGDVRSVVPEAIEVMIALHACDIATDYAIHTGIRCNAAIIMCSPCCHKQIRPQLHSPGLLQPMLQYGLHLGQQAEMLTDSLRALYLEACGYETKVFEFISLEHTNKNKMILAVKRRQAGDNTALLAKIEQLKAFYGVKEHCLETLLRQDGLIAT
>NZ_CP016634.1|WP_070093805.1|2735957_2736974_+|DUF4917-family-protein
MPSLDAHLPSWQALNDRHPCTALLLGNGASRAVWKPFGYFSLFEEAQRVRHKALGVSDQALFKSLGTELFEPVLSTLNTTVRANAALAINSTAPLNRYYSIKEALIHATRAVHLPWALTPSHTLASINQALRSYRNVYTSNYDLLLPWAVSQAPEGFATLFDEQGFFDVRRTATEGTRVVHLHGGLHLLKLPDGTTRQRSAECAELLDGFAVNIPGEVPLFVNESRSEEKLRAIRASDYLSWGLGQLAGEREGLCLFGQHLDASDQHLLEAIRQARPAHLSIAIRPLSEASIVNQKQHFMQRFADLPGTAVHFFDAASHPLGNPALAVAVPAEHVRRR
>NZ_CP016634.1|WP_070093806.1|2734127_2735831_+|SulP-family-inorganic-anion-transporter
MFLSRWLPGLANLLHYRREWLHADLQAGLSVAAIQIPIAIAYAQIVGLPPQYGLYACVLPMIVYALVGSSRQLMVGPDAATCAMIAGAVAPLAMGDPHRIAELSVIVTVLVGVMLIAAGVARAGFIASFFSRPILIGYLNGIGLSLIAGQMSKVVGFKIEGDGFILSLVNFLQRLGEIHWLTLAIGLVGLGLLIWLPRRYPRLPAALVTVAVFTLLAGLFGLDRFGVAILGPVPAGMPELAWPQSTLAETKSLLRDALGIATVSFCSAMLTARSFAARHGYAINANHEFVALGVSNLAAGVSQGFAISGADSRTAVNDMVGGKSQLVGIIAALVIALILLFFTAPMAWIPQAALGAVLLMAGWGLIDVKSLGKIYTLSRFEFWLCLLTTAGVLGLGVLPGIIFAVTLAILRLLYSIYQPTDAVLGWLPGVEGQVDVRHHPEARTVPGLVVYRFDDAILFFNADYFKMRLLDAVQGETKPQAVLFDAEAVTSIDVSGIAALREVRDTLAAQGIYFAIARARGNFLRMLVRSGMAREMEEKLLFGSVRAGIRAYRVWRNRTRRQPALES
>NZ_CP016634.1|WP_070093807.1|2732138_2733107_-|hypothetical-protein
MSEARSFINLEAKNYESLKSALVLSRNQLAKFDVLNAHLASGVVVKGELVIIGDSSTSNCTSHEAFLMAEAANIHADLARNGPDDFLIQNFDFIQSLLAHASMGVGMASDAWSRNLESIKKTLQEIEKLYQDFLRDGRSNRRDRFYVRRADLFARLRQQLRFFASFGSGLRGDGSIKSRLGISTKSFLHTGEIPGYAEKVAGVVRASNLLKKGTYLAMTIEVGSTAVSIHQACTVGREEECRKAKYVEGGSLVGGLGGGVVGGYSSSFVAPFICAALGLSSAGTGLLVCTVLGGAAGGALGGGLGSHYGEEIGLKFYEESAW
>NZ_CP016634.1|WP_070093797.1|2747945_2748551_+|flavin-reductase-family-protein
MYYYEPAKGHGLPHDPFNAIVGPRPIGWISSQDVQGRLNLAPYSFFNAFNYIPPIIGFCSVGRKDSLNNIEQTGEFVWNLATRTLAEPMNQSCAAVAADVDEFELSGLTPAPSRIVGVPRVGESPVAFECKVSQIVQLKRADQALVPSWLILGEVVAVHIAEHLLKDGIYDTAAAEPILRGGGPADYFELGNLFKMARPQV
>NZ_CP016634.1|WP_070093834.1|2748551_2748785_-|hypothetical-protein
MARREFPHFEAVSAMVPVEGGGYNAAIAVKALGMGGAPRFHKVLDGQVFKSAVAADEAASAELARLQGVGEEGELIF
>NZ_CP016634.1|WP_070093796.1|2748897_2749191_-|antibiotic-biosynthesis-monooxygenase
MTQPQPVTHLAFIRASSGRSAELGARLRDLLEPSLRTPGCLSFTIQRSQADDDLWLLSGSWRDQQAMSGYFASPTLEVFGELVQTQVVSSLDLHTFA
>NZ_CP016634.1|WP_070093795.1|2749392_2750310_+|AraC-family-transcriptional-regulator
MPATPLEPTLEAQRQELADLIRRHVGEPSGTVSAIDDLYLVSYRETLRSMPALAQPALCILAQGSKTLFLGDERYAYDPLHYMVVSVTLPISGALLEASPENPSLGLRMDIDPAQISQLIAESGPMMVPNLPSGRGLYVERSDPQLLDALLRLLRLLDSPRDIPVLAPLIRREILYRLLRGPQGHRLYEIALANSQTHRVCQAITWLNRHYQQPLRIEDLAREVNLSTSTLHHRFKAVTSMSPLQYQKQLRLQEARRLMLNDGLEAAVAGYRVGYESPSQFSREYSRLYGAPPIRDVARLRANAS
>NZ_CP016634.1|WP_070093794.1|2750489_2752127_-|5-guanidino-2-oxopentanoate-decarboxylase
MATCGEVLVNLLEGYGVDHVFGIPGVHTVELYRGLASSSIRHITPRHEQGAGFMADGYARTRGKPGVCFIITGPGMTNITTAMGQAYADSIPMLVISSVQSRDQLGGGRGKLHELPNQGALVAGVAAFSHTLMSADDLPQVLARAFAVFDGARPRPVHIEIPLDVLVEPADHLLPARPIRTARAGAAPRTVALMAERLAKAQRPLILAGGGALAAGAVLAELAEHLQAPVALTINAKGLLPATHPLQIGSTQSLVATRALVAEADVVLAIGTELAETDYDVTFKGGFEIPGSLLRIDIDPDQTVRNYLPELALVADAEQAAEALLAALQALPRPAPDATWGSARAERLRKDLASTWDQPTLSQTRLLTSILEALPTAILVGDSTQPVYTGNLTLDMPQPRRWFNASTGYGTLGYALPAAMGAWLGSAERAADRSPAVCLIGDGGLQFTLPELASAVEAQVPLIVLLWNNQGYEEIKKYMVNRAIEPVGVDIHTPDFIGVAQALGAQACNVGDVAQLQAALQAAVERKGPTLIQVDQAQWQATVVG
>NZ_CP016634.1|WP_099593608.1|2752239_2753148_+|LysR-family-transcriptional-regulator
MKRLPPLPALYTFLITAQHCNFTRAAQQLHITQGAVSRQIAGLEEHLGYVLFQRQARGLSLTREGQDWLLRVQQIFTLIEQGVREVGRHSATLQLKAPTCVMRWLLPRLMEWQALRPDVPVELTTTVQHGVDFRREGFDAAVVYGAQPNGGLQVRKLFDEQLTPVCAPSLLEGPLPLARLEDLSRHMLLHPSRDEHDWRLWLQAAGASVELNGPRQHFETLDMAMAMASQGTGVAIGDWALVGDDLRSGRLCMPFGLKVLTGKGYYLVSPARSMPAGLVELLDWLEARARPAGSITHSETRP
>NZ_CP016634.1|WP_070093792.1|2753118_2753733_-|NAD(P)-dependent-oxidoreductase
MSKIAIIGATGRAGSQLLEEALRRGHQVVAIARNPSKLNGREGVTTKALDAKDSAALKAALAGADAVMSAAHFATIEPEAIIEPVKAAGVARLLVVGGAGSLLLPSGQRVIDSPDFPEAYKAEASAGVRFLDALRQTSGLEWTFLSPSAEFVEGARSGQYRLGKDDLLIGADGRSWITFADYAIAMIDELENPAHSRARFTVGY
>NZ_CP016634.1|WP_070093791.1|2753760_2754636_-|MBL-fold-metallo-hydrolase
MSLITTLRSLVLASLALAGQALAAEPLHLEVYNPGHDAIFPVSSVIVSGEHDAILVDAQFGKAQAEQVVQRLKAGGKRLTTIYISHGDPDYYFGLDTLTRAFPKAQVLASAATVAHIRKTMDAKLDYWGPKMGSDKPEKLVVPQVLVGDRLELEGQALEVVGLDGPQPDRSFVWIPSIKAVVGGVIVAEHIHVWMADTQTAQSHADWLATLERIERLAPRTVIPGHYLGQSSRSLDAVRFTAGYIRAFDAEAAKAAHSDALIKAMEQRYPQLGDASSLELSAKVAKGEMQW
>NZ_CP016634.1|WP_070093790.1|2754737_2755643_+|LysR-family-transcriptional-regulator
MDRLNAMRVFVTVVDLGSQSAAADHLQLSRPVVSRYLAELEDWVGARLMQRTTRKLSLTAAGQETLPRCRQLLELAGDLQAAVRQPDDAPRGELRISVSTSFGQAQLVDAVAEYVRRYPGVKVELQMLDRTVNLVDERIDLAIRTSNDLDPNLIARRLTVCRSVVCAAPAYLAEHGAPRQVEELGQHNCLTHAYFGHSLWQFEVEGRHVAVPVQGNISANEAMTLQKAALAGAGIAMLPTYQVASALRSGELVRLLPEARPRELSLNAVYTSRKHMPATLRSMLDFLAQRFTDEPQWDKDL
>NZ_CP016634.1|WP_070093789.1|2755673_2756543_-|oxaloacetate-decarboxylase
MPKASHHDLRFAFRELLASGSCFHTASVFDPMSARIAADLGFEVGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAQLPVIADADHGYGNALNVMRTVIELERAGVAALTIEDTLLPAQFGRKSTDLIPVEEGVGKIRAAIEARVDSALSIIARTNAGVLTTEEIIHRTQSYQKAGADGICMVGVKDFEQLEQIAEHLTVPLMLVSYGNPNLRDDARLASLGVRIVVDGHAAYFAAIKATYDCLRLQRGQQNKSDSLNATELSHTYTQPEDYIRWAKEYMSVEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP016634_3	3.1\|2747679\|53\|NZ_CP016634\|CRISPRCasFinder	2747679-2747731	53	NZ_CP016634.1	2747718-2747770	1	0.981

1. spacer 3.1|2747679|53|NZ_CP016634|CRISPRCasFinder matches to position: 2747718-2747770, mismatch: 1, identity: 0.981

acgaccgcactggtgcacaacgcttcgccgaagatggctacgaccgcactggc	CRISPR spacer
acgaccgcactggcgcacaacgcttcgccgaagatggctacgaccgcactggc	Protospacer
*************.***************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

360808 : 423895

Pseudomonas_phage(69.77%)

tRNA,head,plate,integrase,holin,protease,capsid,portal,terminase,transposase,tail

attL 384454:384472|attR 421696:421714

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070091660.1\|360808_362605_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_070091659.1\|362595_363537_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_070091658.1\|363533_365315_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.7e-22	24.4
WP_070091657.1\|365327_365615_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_099592812.1\|365623_366655_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_070091655.1\|366651_367242_+	type VI secretion lipoprotein TssJ	NA	NA	NA	NA
WP_070091654.1\|367238_368645_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_157765862.1\|368631_369237_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_081337414.1\|369243_372663_+	hypothetical protein	NA	NA	NA	NA
WP_070091651.1\|372675_375195_+	type VI secretion system ATPase TssH	A0A2I7SAX5	Vibrio_phage	2.7e-52	45.7
WP_070091650.1\|375283_375970_+	hypothetical protein	NA	NA	NA	NA
WP_139139868.1\|376050_376791_+	hypothetical protein	NA	NA	NA	NA
WP_139139867.1\|376808_377525_+	hypothetical protein	NA	NA	NA	NA
WP_070091647.1\|377675_378383_+	hypothetical protein	NA	NA	NA	NA
WP_099592814.1\|378729_378990_+	hypothetical protein	A0A2H4JF35	uncultured_Caudovirales_phage	4.9e-26	56.6
WP_070091646.1\|379114_379318_+	carbon storage regulator	NA	NA	NA	NA
WP_043206612.1\|379306_379534_-	YheU family protein	A0A2H4J8A7	uncultured_Caudovirales_phage	9.3e-29	82.7
WP_070091645.1\|379642_380827_-	osmoprotectant NAGGN system M42 family peptidase	NA	NA	NA	NA
WP_070091644.1\|380938_382681_-	N-acetylglutaminylglutamine synthetase	NA	NA	NA	NA
WP_070091643.1\|382684_384472_-	N-acetylglutaminylglutamine amidotransferase	R4TIC1	Phaeocystis_globosa_virus	1.2e-33	29.1
384454:384472	attL	NA	NA	NA	NA
WP_099592816.1\|384508_385699_-\|integrase	site-specific integrase	A0A1B0Z061	Pseudomonas_phage	2.7e-111	55.4
WP_099592818.1\|385886_386660_-	DUF1566 domain-containing protein	A0A0A0YR68	Pseudomonas_phage	3.1e-07	30.3
WP_172959795.1\|387051_387195_-	hypothetical protein	NA	NA	NA	NA
WP_099592823.1\|387837_388065_-	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	2.8e-09	57.6
WP_099594116.1\|388137_388623_-	DUF1566 domain-containing protein	NA	NA	NA	NA
WP_099592825.1\|388775_389609_-\|transposase	transposase	A0A0A0YRT7	Pseudomonas_phage	7.7e-113	89.9
WP_099592860.1\|389605_389851_-	hypothetical protein	NA	NA	NA	NA
WP_099592863.1\|389932_390322_-	response regulator transcription factor	A0A1W6JTA9	Pseudomonas_phage	2.7e-20	49.6
WP_099592865.1\|390455_391211_-	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	1.2e-69	61.3
WP_157765863.1\|391314_391641_+	helix-turn-helix domain-containing protein	A0A1W6JTD1	Pseudomonas_phage	1.3e-20	56.6
WP_099592867.1\|391778_392114_+	hypothetical protein	NA	NA	NA	NA
WP_099592869.1\|392106_392487_+	hypothetical protein	NA	NA	NA	NA
WP_099592871.1\|392483_392927_+	hypothetical protein	NA	NA	NA	NA
WP_099592873.1\|392923_393709_+	Rha family transcriptional regulator	A0A0U4J8Z7	Pseudomonas_phage	4.8e-40	64.0
WP_099592875.1\|393705_394005_+	hypothetical protein	NA	NA	NA	NA
WP_099592877.1\|394001_394604_+	hypothetical protein	NA	NA	NA	NA
WP_099592879.1\|394603_394834_+	hypothetical protein	A0A1W6JTF8	Pseudomonas_phage	1.5e-18	59.2
WP_099594118.1\|394914_395586_+	replication protein	Q6V7R6	Burkholderia_virus	3.5e-47	49.4
WP_099592881.1\|395566_396379_+	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	1.7e-77	52.8
WP_099592883.1\|396375_397785_+	replicative DNA helicase	A0A1W6JTB3	Pseudomonas_phage	1.1e-119	50.6
WP_099592885.1\|397771_398260_+	hypothetical protein	NA	NA	NA	NA
WP_099592887.1\|398328_398820_+	hypothetical protein	NA	NA	NA	NA
WP_099592888.1\|398816_399104_+	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	6.5e-11	40.2
WP_099592890.1\|399100_399475_+	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	7.1e-34	55.9
WP_099592892.1\|399642_400353_+	hypothetical protein	NA	NA	NA	NA
WP_099592894.1\|400410_400599_+	hypothetical protein	NA	NA	NA	NA
WP_099592896.1\|400669_400993_+\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	1.9e-27	63.2
WP_099592898.1\|400997_401198_+	hypothetical protein	NA	NA	NA	NA
WP_099592900.1\|401194_401386_+	hypothetical protein	NA	NA	NA	NA
WP_099592902.1\|401388_401724_+	HNH endonuclease	B5WZZ4	Pseudomonas_phage	4.7e-29	53.2
WP_099592904.1\|401842_402376_+\|terminase	terminase small subunit	Q3HQS6	Burkholderia_phage	3.6e-23	48.3
WP_172959796.1\|402375_404061_+\|terminase	terminase large subunit	A0A2H4JDK9	uncultured_Caudovirales_phage	1.2e-250	80.9
WP_099592908.1\|404063_405275_+\|portal	phage portal protein	A0A2H4JFN7	uncultured_Caudovirales_phage	7.9e-175	76.0
WP_099592909.1\|405261_405903_+\|head,protease	HK97 family phage prohead protease	A0A2H4JA51	uncultured_Caudovirales_phage	2.9e-91	77.5
WP_099592911.1\|405899_407102_+\|capsid	phage major capsid protein	A0A2H4J8D1	uncultured_Caudovirales_phage	2.5e-128	60.4
WP_099592913.1\|407155_407512_+	hypothetical protein	NA	NA	NA	NA
WP_099592915.1\|407512_407812_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	1.6e-36	71.7
WP_099592917.1\|407811_408174_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_172959797.1\|408166_408670_+	hypothetical protein	NA	NA	NA	NA
WP_099592919.1\|408700_409291_+	hypothetical protein	B5TK65	Pseudomonas_phage	9.1e-60	58.2
WP_099592921.1\|409287_409470_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	6.5e-17	70.0
WP_099592923.1\|409469_410966_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	2.8e-222	77.7
WP_099592925.1\|411026_411374_+\|tail	phage tail tube protein	B5TK68	Pseudomonas_phage	4.9e-45	74.8
WP_099592927.1\|411370_411667_+\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	1.0e-27	65.6
WP_099592929.1\|411797_413684_+\|tail	phage tail tape measure protein	U5P420	Shigella_phage	2.7e-97	47.3
WP_099592931.1\|413680_414979_+	DNA circularization N-terminal domain-containing protein	B5TK71	Pseudomonas_phage	1.2e-107	47.4
WP_099592933.1\|414982_416092_+\|plate	baseplate protein	B5TK72	Pseudomonas_phage	3.8e-115	59.5
WP_099592935.1\|416088_416601_+\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	2.6e-55	62.4
WP_099592937.1\|416597_416993_+	phage GP46 family protein	B5TK74	Pseudomonas_phage	1.9e-45	73.0
WP_099592939.1\|416982_418023_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.0e-134	69.9
WP_099592941.1\|418010_418610_+	YmfQ family protein	B5TK76	Pseudomonas_phage	4.6e-83	71.9
WP_099592943.1\|418620_419700_+\|tail	tail fiber protein	B5TK79	Pseudomonas_phage	1.1e-106	56.1
WP_099592945.1\|419707_420259_+\|tail	tail fiber assembly protein	B5TK80	Pseudomonas_phage	4.7e-50	50.0
WP_099592947.1\|420328_420817_+	glycoside hydrolase family 104 protein	Q9MC90	Pseudomonas_phage	2.1e-54	65.2
WP_099592949.1\|420813_421170_+	hypothetical protein	NA	NA	NA	NA
WP_099594122.1\|421235_421508_+	hypothetical protein	H2BDA1	Pseudomonas_phage	1.1e-20	67.9
WP_070091642.1\|421912_423895_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
421696:421714	attR	NA	NA	NA	NA

DBSCAN-SWA_2

942256 : 1002351

uncultured_Caudovirales_phage(40.0%)

tRNA,integrase,bacteriocin,holin,protease

attL 930557:930574|attR 1006545:1006562

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
930557:930574	attL	NA	NA	NA	NA
WP_070092664.1\|942256_943381_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_070092663.1\|943439_943880_-	NUDIX hydrolase	NA	NA	NA	NA
WP_070092662.1\|944004_946230_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_070092661.1\|946713_947970_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.5e-16	79.6
WP_070092660.1\|948042_948300_-	cold shock domain-containing protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.5e-14	58.5
WP_043212233.1\|948530_948893_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.8e-11	43.2
WP_070092659.1\|948923_951194_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.8e-165	43.0
WP_002553999.1\|951369_951588_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_070092658.1\|951691_952399_-	arginyltransferase	NA	NA	NA	NA
WP_070092657.1\|952454_953135_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_070092656.1\|953576_956015_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	50.6
WP_070092655.1\|956077_956701_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_070092654.1\|956713_958039_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	3.4e-78	40.2
WP_070092653.1\|958035_958410_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	9.3e-10	45.8
WP_070092652.1\|958440_959721_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.4e-97	55.0
WP_070092651.1\|959721_961113_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_070092650.1\|961237_962200_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_070092649.1\|962296_963298_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.5e-155	80.2
WP_070092648.1\|963294_963630_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.2e-43	75.7
WP_070092647.1\|963626_963923_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.2e-28	65.7
WP_070092646.1\|963922_964282_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	4.1e-39	68.3
WP_070092645.1\|964283_964676_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	7.6e-55	80.6
WP_070092644.1\|964765_966145_-	uracil-xanthine permease	H9YQ34	environmental_Halophage	1.4e-26	51.5
WP_070092643.1\|966388_967060_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.4e-104	90.6
WP_070092642.1\|967573_968254_-	CerR family C-terminal domain-containing protein	NA	NA	NA	NA
WP_070092641.1\|968371_969373_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_070092640.1\|969369_971139_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.1e-19	28.5
WP_070092639.1\|971138_972263_+	ABC transporter permease	NA	NA	NA	NA
WP_070092638.1\|972267_973380_+	ABC transporter permease	NA	NA	NA	NA
WP_070092716.1\|973395_974898_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_070092637.1\|975178_975562_+	hypothetical protein	NA	NA	NA	NA
WP_070092636.1\|975625_975940_-\|holin	phage holin, lambda family	A0A2H4JFM8	uncultured_Caudovirales_phage	2.6e-21	51.0
WP_070092635.1\|976211_976985_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	8.1e-16	26.5
WP_099593111.1\|978000_978855_+	hypothetical protein	NA	NA	NA	NA
WP_070092632.1\|978851_980357_+	hypothetical protein	NA	NA	NA	NA
WP_099593113.1\|980451_981204_+	hypothetical protein	NA	NA	NA	NA
WP_170831779.1\|981249_981426_-	hypothetical protein	NA	NA	NA	NA
WP_099593117.1\|981896_982394_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_070092629.1\|982961_983867_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_070092628.1\|983968_984730_+	TSUP family transporter	NA	NA	NA	NA
WP_070092627.1\|984731_986141_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.5e-15	31.0
WP_070092626.1\|986302_988132_-	SLC13 family permease	NA	NA	NA	NA
WP_070092625.1\|988276_988669_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_070092624.1\|988747_988957_-	hypothetical protein	NA	NA	NA	NA
WP_070092623.1\|989170_989521_+	hypothetical protein	NA	NA	NA	NA
WP_099593119.1\|989522_990221_-	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_070092621.1\|990236_991310_-	PAS domain S-box protein	NA	NA	NA	NA
WP_070092620.1\|991455_992223_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.3e-18	31.3
WP_099593121.1\|992242_993310_-	phosphotransferase family protein	NA	NA	NA	NA
WP_043211712.1\|993507_993825_-	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA
WP_070092618.1\|993880_994591_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_099593123.1\|995024_996314_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_099593126.1\|996463_996868_+	hypothetical protein	NA	NA	NA	NA
WP_099593128.1\|996975_997611_+	hypothetical protein	NA	NA	NA	NA
WP_099593130.1\|998384_998780_+	hypothetical protein	NA	NA	NA	NA
WP_099593132.1\|998819_999830_+	hypothetical protein	NA	NA	NA	NA
WP_157765867.1\|999835_1000156_+	hypothetical protein	NA	NA	NA	NA
WP_099593136.1\|1000421_1000946_+	KilA-N domain-containing protein	NA	NA	NA	NA
WP_070094272.1\|1001331_1002351_+\|protease	protease SohB	NA	NA	NA	NA
1006545:1006562	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1117009 : 1174904

Catovirus(20.0%)

holin,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070091515.1\|1117009_1117957_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_081337404.1\|1118079_1119165_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_070091514.1\|1119240_1120902_-\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	1.0e-55	30.6
WP_099593153.1\|1120923_1122087_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_157765868.1\|1123187_1123373_-	hypothetical protein	NA	NA	NA	NA
WP_070091511.1\|1123363_1124245_-	copper resistance protein B	NA	NA	NA	NA
WP_070091510.1\|1124234_1124549_-	hypothetical protein	NA	NA	NA	NA
WP_070091509.1\|1124545_1126291_-	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_070091508.1\|1126745_1127987_-	L-2-hydroxyglutarate oxidase	NA	NA	NA	NA
WP_070091507.1\|1128042_1129029_-	carbon starvation induced protein CsiD	NA	NA	NA	NA
WP_070091506.1\|1129211_1129904_+	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA
WP_070091505.1\|1130196_1130751_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_070091504.1\|1130779_1132126_+	glutamine synthetase	NA	NA	NA	NA
WP_070091503.1\|1132205_1132979_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_099593155.1\|1133051_1134410_+	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_070091501.1\|1134559_1135114_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_070091500.1\|1135295_1136078_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_070091499.1\|1136074_1137394_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_170831743.1\|1137390_1139487_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_070091497.1\|1139500_1140301_+	aspartyl/asparaginyl beta-hydroxylase domain-containing protein	NA	NA	NA	NA
WP_070091496.1\|1140288_1141308_+	sulfotransferase family protein	NA	NA	NA	NA
WP_070091495.1\|1141434_1141938_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_070091494.1\|1141934_1142255_+	hypothetical protein	NA	NA	NA	NA
WP_070091493.1\|1142318_1142897_+\|tail	phage tail protein	E3T4R8	Cafeteria_roenbergensis_virus	3.0e-15	34.7
WP_070091492.1\|1142969_1143827_+	sulfotransferase	M4QPS9	Synechococcus_phage	3.3e-26	30.6
WP_099593157.1\|1143873_1150788_+	DUF4347 domain-containing protein	A0A2D1GMQ7	Marinobacter_phage	2.1e-22	29.4
WP_070091486.1\|1150841_1152338_+	TolC family protein	NA	NA	NA	NA
WP_070091485.1\|1152408_1153023_-	adenylyl-sulfate kinase	NA	NA	NA	NA
WP_070091484.1\|1153134_1153962_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_070091483.1\|1154037_1154913_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_099593159.1\|1154963_1156259_-	MFS transporter	NA	NA	NA	NA
WP_070091491.1\|1156371_1157460_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_070091481.1\|1157574_1158669_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_070091480.1\|1158759_1159278_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_070091479.1\|1159421_1161917_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_070091478.1\|1161913_1162822_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_070091477.1\|1162818_1166628_-	ImcF-like family protein	NA	NA	NA	NA
WP_070091476.1\|1166658_1167375_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_070091475.1\|1167371_1168715_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_099593161.1\|1168711_1169431_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_070091473.1\|1169455_1172053_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	1.8e-91	31.0
WP_070091472.1\|1172049_1173120_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_070091471.1\|1173083_1174904_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_4

1694874 : 1747840

Shigella_phage(37.5%)

integrase,transposase

attL 1687885:1687900|attR 1749260:1749275

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1687885:1687900	attL	NA	NA	NA	NA
WP_099593259.1\|1694874_1696036_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.6e-86	53.6
WP_157765877.1\|1696143_1696335_+	hypothetical protein	NA	NA	NA	NA
WP_087535084.1\|1696432_1697582_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-100	65.9
WP_009684101.1\|1699681_1701169_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.4e-266	98.4
WP_012316922.1\|1701180_1702032_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.9e-143	92.9
WP_009684099.1\|1702124_1702658_+	NUDIX domain-containing protein	A0A2H4J8B3	uncultured_Caudovirales_phage	2.4e-67	96.2
WP_099592754.1\|1702691_1704227_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.1e-116	45.9
WP_009684097.1\|1704288_1704624_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_009684096.1\|1704620_1704953_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_070094542.1\|1705309_1705936_-	hypothetical protein	NA	NA	NA	NA
WP_070094543.1\|1705959_1706799_-	hypothetical protein	NA	NA	NA	NA
WP_070094544.1\|1706982_1708707_+	AAA family ATPase	NA	NA	NA	NA
WP_070094545.1\|1708700_1709543_+	hypothetical protein	NA	NA	NA	NA
WP_172959814.1\|1709977_1712149_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_070094547.1\|1712192_1713488_-	ATP-binding protein	NA	NA	NA	NA
WP_070094548.1\|1713484_1715893_-	TerB N-terminal domain-containing protein	NA	NA	NA	NA
WP_172959804.1\|1716102_1718445_-	DUF3893 domain-containing protein	NA	NA	NA	NA
WP_070094550.1\|1718460_1721535_-	hypothetical protein	NA	NA	NA	NA
WP_070094551.1\|1721512_1722544_-	hypothetical protein	NA	NA	NA	NA
WP_139139921.1\|1722749_1723307_-	hypothetical protein	NA	NA	NA	NA
WP_054912707.1\|1723381_1723783_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_070094552.1\|1724394_1725288_-	viroplasmin family protein	NA	NA	NA	NA
WP_170831818.1\|1725398_1725905_-	hypothetical protein	NA	NA	NA	NA
WP_099593264.1\|1725988_1727543_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_087535084.1\|1728182_1729333_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-100	65.9
WP_023535636.1\|1730433_1731663_+	DUF4338 domain-containing protein	NA	NA	NA	NA
WP_157765878.1\|1731683_1733351_+	hypothetical protein	NA	NA	NA	NA
WP_099593271.1\|1733347_1735237_+	hypothetical protein	NA	NA	NA	NA
WP_172959805.1\|1735921_1736272_+	hypothetical protein	NA	NA	NA	NA
WP_099593276.1\|1736271_1741809_+	DUF1998 domain-containing protein	A0A1B1IUF6	uncultured_Mediterranean_phage	2.7e-36	22.9
WP_099593278.1\|1742980_1745068_-	hypothetical protein	NA	NA	NA	NA
WP_099593281.1\|1745054_1746575_-	site-specific recombinase	NA	NA	NA	NA
WP_099593283.1\|1746586_1747840_-\|integrase	site-specific integrase	NA	NA	NA	NA
1749260:1749275	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2365764 : 2412127

uncultured_Caudovirales_phage(39.58%)

integrase,holin,capsid,terminase,tail

attL 2405833:2405849|attR 2414296:2414312

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099593441.1\|2365764_2368476_-	hypothetical protein	A0A0H5ART3	Pseudomonas_phage	2.7e-276	54.2
WP_099593443.1\|2368472_2368868_-	hypothetical protein	A0A2H4PI57	Pseudomonas_phage	3.8e-38	57.3
WP_099593445.1\|2368879_2369386_-	DUF1833 family protein	B5WZT6	Pseudomonas_phage	1.2e-39	46.6
WP_099593447.1\|2369894_2373314_-\|tail	phage tail length tape measure family protein	A0A2H4J107	uncultured_Caudovirales_phage	1.5e-98	33.9
WP_099594158.1\|2373328_2373523_-	hypothetical protein	NA	NA	NA	NA
WP_099593449.1\|2373690_2374134_-	hypothetical protein	NA	NA	NA	NA
WP_099593451.1\|2374191_2375361_-	Ig domain-containing protein	A0A059VG08	Pseudomonas_phage	5.4e-56	40.1
WP_099593453.1\|2375427_2375619_-	hypothetical protein	NA	NA	NA	NA
WP_099593455.1\|2375618_2376023_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_099593457.1\|2376019_2376580_-	hypothetical protein	A0A1B0VMI1	Pseudomonas_phage	3.7e-26	39.9
WP_099593459.1\|2376582_2376963_-	glutamate 5-kinase	A0A059VA70	Pseudomonas_phage	9.7e-31	52.0
WP_099593461.1\|2376965_2377358_-	protein singed	A0A0H5AUF0	Pseudomonas_phage	7.3e-05	32.3
WP_099593463.1\|2377409_2377988_-	hypothetical protein	NA	NA	NA	NA
WP_099593465.1\|2378036_2379005_-	hypothetical protein	R9TJ64	Synechococcus_phage	1.4e-113	64.8
WP_015269849.1\|2379017_2379728_-	hypothetical protein	A0A2H4J0Y0	uncultured_Caudovirales_phage	1.6e-39	62.6
WP_099593467.1\|2379845_2380892_-\|capsid	minor capsid protein	A0A1B0VMF3	Pseudomonas_phage	4.1e-47	34.7
WP_099593469.1\|2380881_2382306_-	DUF4055 domain-containing protein	A0A2H4J5M6	uncultured_Caudovirales_phage	3.3e-71	35.7
WP_099594161.1\|2382314_2383802_-\|terminase	terminase	A0A2H4J2I1	uncultured_Caudovirales_phage	1.8e-277	93.8
WP_099593471.1\|2383774_2384392_-	HNH endonuclease	A0A2I7S6L5	Vibrio_phage	2.8e-27	37.1
WP_099593473.1\|2384506_2385106_-	hypothetical protein	A0A2H4J2I6	uncultured_Caudovirales_phage	2.2e-24	41.0
WP_099593476.1\|2385115_2385550_-	proteasome subunit beta	A0A2H4J821	uncultured_Caudovirales_phage	6.7e-76	99.3
WP_099594163.1\|2385558_2385795_-	hypothetical protein	A0A1S6UB66	Serratia_phage	7.9e-15	59.7
WP_054830717.1\|2385845_2386178_-\|holin	phage holin, lambda family	A0A2H4J1U5	uncultured_Caudovirales_phage	3.5e-53	90.9
WP_099593478.1\|2386714_2387305_-	hypothetical protein	A0A059VF83	Pseudomonas_phage	5.0e-58	56.1
WP_099593480.1\|2387423_2388005_-	recombination protein NinG	A0A059VA66	Pseudomonas_phage	5.8e-67	64.6
WP_099593483.1\|2388004_2388421_-	recombination protein NinB	A0A2H4JA22	uncultured_Caudovirales_phage	1.9e-72	94.9
WP_099593485.1\|2388413_2388797_-	hypothetical protein	NA	NA	NA	NA
WP_099593487.1\|2388793_2389027_-	hypothetical protein	NA	NA	NA	NA
WP_099593490.1\|2389023_2389335_-	hypothetical protein	A0A2H4JG78	uncultured_Caudovirales_phage	6.1e-07	40.2
WP_099593492.1\|2389334_2389547_-	hypothetical protein	NA	NA	NA	NA
WP_099593494.1\|2389543_2390350_-	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	9.5e-60	51.9
WP_099593496.1\|2390336_2391320_-	phage replication protein	A0A1B0VME0	Pseudomonas_phage	5.3e-113	73.7
WP_099593498.1\|2391321_2391795_-	ead/Ea22-like family protein	A0A2H4J7V6	uncultured_Caudovirales_phage	5.8e-25	57.3
WP_099593500.1\|2391791_2392043_-	hypothetical protein	F8TVH0	EBPR_siphovirus	6.2e-18	58.8
WP_099593502.1\|2392039_2392894_-	Rha family transcriptional regulator	F1C5A3	Cronobacter_phage	2.3e-35	41.2
WP_099593504.1\|2393015_2393228_-	hypothetical protein	NA	NA	NA	NA
WP_099593507.1\|2393247_2393454_-	hypothetical protein	NA	NA	NA	NA
WP_027907145.1\|2393744_2393948_-	hypothetical protein	A0A2H4J528	uncultured_Caudovirales_phage	9.1e-28	95.5
WP_099593511.1\|2393980_2394190_-	helix-turn-helix domain-containing protein	H2BD64	Pseudomonas_phage	5.5e-20	71.6
WP_099594166.1\|2394278_2394944_+	helix-turn-helix domain-containing protein	A0A2H4J868	uncultured_Caudovirales_phage	2.8e-49	63.6
WP_099593513.1\|2394996_2395311_+	hypothetical protein	NA	NA	NA	NA
WP_099593515.1\|2395312_2395825_+	hypothetical protein	NA	NA	NA	NA
WP_157765886.1\|2396061_2396733_+	hypothetical protein	NA	NA	NA	NA
WP_070085589.1\|2397460_2397682_+	hypothetical protein	NA	NA	NA	NA
WP_099593519.1\|2397753_2397966_+	hypothetical protein	A0A2H4JGV5	uncultured_Caudovirales_phage	1.5e-17	65.2
WP_099593521.1\|2398563_2398977_+	hypothetical protein	NA	NA	NA	NA
WP_099593523.1\|2398973_2399177_+	hypothetical protein	NA	NA	NA	NA
WP_099593525.1\|2399173_2399395_+	hypothetical protein	A0A2H4J1S2	uncultured_Caudovirales_phage	3.7e-14	58.3
WP_099593527.1\|2399391_2399658_+	hypothetical protein	A0A0H5AW99	Pseudomonas_phage	3.5e-27	70.9
WP_099593529.1\|2399815_2400127_+	hypothetical protein	NA	NA	NA	NA
WP_099593531.1\|2400126_2400396_+	hypothetical protein	NA	NA	NA	NA
WP_099593534.1\|2400570_2401674_+	hypothetical protein	A0A1B0VN89	Pseudomonas_phage	1.6e-57	65.0
WP_099593537.1\|2401681_2402626_+	recombinase RecT	H9C0R8	Aeromonas_phage	8.8e-65	56.8
WP_099593539.1\|2402612_2403242_+	YqaJ viral recombinase family protein	A0A0S2SY31	Pseudomonas_phage	1.3e-80	69.4
WP_099593541.1\|2403748_2403943_+	hypothetical protein	NA	NA	NA	NA
WP_099593543.1\|2403984_2404332_+	hypothetical protein	A0A2H4J0L9	uncultured_Caudovirales_phage	2.2e-45	84.4
WP_099593545.1\|2404306_2404645_+	hypothetical protein	A0A2H4J0R5	uncultured_Caudovirales_phage	1.6e-45	85.7
WP_099593547.1\|2404711_2406340_+	DNA cytosine methyltransferase	A0A2I7RFJ9	Vibrio_phage	2.1e-98	43.6
2405833:2405849	attL	NA	NA	NA	NA
WP_099593549.1\|2406348_2407164_+	hypothetical protein	A0A0U3TGW4	Pseudomonas_phage	6.8e-05	43.3
WP_099593550.1\|2407160_2407349_+	hypothetical protein	NA	NA	NA	NA
WP_099593552.1\|2407431_2408226_+	hypothetical protein	Q5QF32	Pseudomonas_virus	1.5e-70	54.5
WP_099593554.1\|2408222_2408483_+	hypothetical protein	A0A2H4J399	uncultured_Caudovirales_phage	1.9e-22	67.4
WP_099594168.1\|2408545_2408812_+	hypothetical protein	A0A2H4JA03	uncultured_Caudovirales_phage	9.2e-36	84.9
WP_099593556.1\|2408858_2409092_+	hypothetical protein	A0A2H4PHJ9	Dickeya_phage	4.4e-10	45.5
WP_081337426.1\|2409144_2409531_+	hypothetical protein	A0A2I7RNE0	Vibrio_phage	5.8e-23	45.9
WP_170831749.1\|2409570_2409747_+	hypothetical protein	A0A2H4J7S3	uncultured_Caudovirales_phage	2.9e-14	58.6
WP_070091782.1\|2410049_2411231_+\|integrase	tyrosine-type recombinase/integrase	A0A059VF45	Pseudomonas_phage	1.3e-153	66.8
WP_070091783.1\|2411487_2411844_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003250679.1\|2411824_2412127_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.0e-11	38.9
2414296:2414312	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2998591 : 3092271

Shigella_phage(15.0%)

integrase,transposase

attL 2993397:2993411|attR 3096924:3096941

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2993397:2993411	attL	NA	NA	NA	NA
WP_087535084.1\|2998591_2999741_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.2e-100	65.9
2993397:2993411	attL	NA	NA	NA	NA
WP_099593650.1\|2999768_3000338_+	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_099593652.1\|3000344_3000986_+	hypothetical protein	NA	NA	NA	NA
WP_070091772.1\|3001438_3002971_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.7e-89	37.9
WP_081337423.1\|3002989_3003346_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	8.3e-16	36.4
WP_099594186.1\|3004631_3006488_-	hypothetical protein	NA	NA	NA	NA
WP_099593658.1\|3007437_3007680_+	hypothetical protein	NA	NA	NA	NA
WP_099594188.1\|3007714_3008599_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_157765889.1\|3008595_3008829_+	hypothetical protein	NA	NA	NA	NA
WP_029380191.1\|3009635_3010841_+	chromate efflux transporter	NA	NA	NA	NA
WP_009405714.1\|3010851_3011157_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003465068.1\|3011950_3013630_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003465065.1\|3013632_3014541_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_014754502.1\|3014537_3015755_+	TniQ family protein	NA	NA	NA	NA
WP_049277571.1\|3015818_3016436_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.1e-34	46.2
WP_049277576.1\|3016776_3018021_-	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_049277574.1\|3018095_3019418_-	PAS domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	9.9e-22	47.4
WP_010465829.1\|3019885_3020488_+	recombinase family protein	A0A0C4UR34	Shigella_phage	1.6e-40	50.3
WP_024015041.1\|3020471_3023501_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_003464995.1\|3023737_3024583_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003464991.1\|3024612_3025131_-	DUF417 family protein	NA	NA	NA	NA
WP_005005993.1\|3027508_3027883_+	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA
3026353:3026367	attR	NA	NA	NA	NA
WP_003464988.1\|3028743_3029010_-	hypothetical protein	NA	NA	NA	NA
3026353:3026367	attR	NA	NA	NA	NA
WP_003464986.1\|3029179_3029461_-	DUF427 domain-containing protein	NA	NA	NA	NA
WP_005005995.1\|3029528_3029801_-	glutaredoxin 3	A0A1X7BZ88	Faustovirus	1.3e-08	42.6
WP_002118292.1\|3030254_3031001_-	ferredoxin reductase	NA	NA	NA	NA
WP_003464980.1\|3030993_3031596_-	sulfite oxidase-like oxidoreductase	NA	NA	NA	NA
WP_003464979.1\|3032063_3032534_+	hypothetical protein	NA	NA	NA	NA
WP_010591688.1\|3032859_3033153_-	DUF1330 domain-containing protein	NA	NA	NA	NA
WP_005006001.1\|3033211_3033643_-	heme-binding protein	NA	NA	NA	NA
WP_002118279.1\|3033715_3034729_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_016487060.1\|3034804_3034972_+	hypothetical protein	NA	NA	NA	NA
WP_003464971.1\|3035176_3036145_-	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_003464969.1\|3036141_3036846_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_003464967.1\|3036986_3037526_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_003464965.1\|3037527_3037971_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_076611919.1\|3038253_3039375_-\|transposase	ISAs1-like element ISPa60 family transposase	NA	NA	NA	NA
WP_071890699.1\|3039729_3040533_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	5.2e-34	36.2
WP_110992713.1\|3040525_3042025_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_153046132.1\|3041968_3043039_+	hypothetical protein	I4AZM6	Saccharomonospora_phage	1.2e-20	34.7
WP_003464945.1\|3043402_3044332_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_049273832.1\|3044358_3045681_-	MFS transporter	Q6JIH2	Burkholderia_virus	5.4e-52	34.5
WP_003464940.1\|3045761_3046688_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003465037.1\|3047624_3047849_-	DUF2798 domain-containing protein	NA	NA	NA	NA
WP_003465039.1\|3047903_3048605_-	cysteine hydrolase	NA	NA	NA	NA
WP_003465041.1\|3048695_3049286_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_016487046.1\|3049367_3050045_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003464938.1\|3050931_3052134_-\|transposase	ISL3 family transposase	A4PE56	Ralstonia_virus	8.8e-110	54.2
WP_011711661.1\|3052624_3053101_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_052959448.1\|3053501_3053873_+	hypothetical protein	NA	NA	NA	NA
WP_047296649.1\|3053914_3054175_+	hypothetical protein	NA	NA	NA	NA
WP_003465026.1\|3054163_3055192_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.5e-46	36.6
WP_099593662.1\|3055216_3055843_-	site-specific DNA-methyltransferase	A0A2K5B255	Erysipelothrix_phage	2.1e-14	33.6
WP_049275860.1\|3056826_3057756_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_003465017.1\|3057870_3058755_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_020309197.1\|3060188_3060722_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_049275859.1\|3060839_3061682_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000480959.1\|3062319_3063156_-	APH(6)-I family aminoglycoside O-phosphotransferase	NA	NA	NA	NA
WP_025464697.1\|3063155_3063959_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	2.2e-24	34.6
WP_099593669.1\|3064024_3064639_-	recombinase family protein	E5FFF9	Burkholderia_phage	3.5e-38	49.2
WP_009288528.1\|3064690_3065908_-	TniQ family protein	NA	NA	NA	NA
WP_013741668.1\|3065904_3066813_-	TniB family NTP-binding protein	NA	NA	NA	NA
WP_011494284.1\|3066815_3068498_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_099593671.1\|3068633_3069194_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.8e-40	53.7
WP_099593673.1\|3069174_3070836_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_099593675.1\|3070825_3071797_+	ExeA family protein	NA	NA	NA	NA
WP_099593677.1\|3072183_3072942_-	cation transporter	NA	NA	NA	NA
WP_099593679.1\|3073177_3073591_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_099593681.1\|3073901_3074249_+	DUF3703 domain-containing protein	NA	NA	NA	NA
WP_099593683.1\|3074245_3074758_+	lipoprotein signal peptidase	NA	NA	NA	NA
WP_099593685.1\|3074754_3075501_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_099593687.1\|3075569_3076439_+	sterol desaturase family protein	NA	NA	NA	NA
WP_157765890.1\|3076784_3077231_+	hypothetical protein	NA	NA	NA	NA
WP_172959809.1\|3077313_3079227_+	GGDEF domain-containing protein	G3MA91	Bacillus_virus	1.6e-20	35.0
WP_099593694.1\|3080756_3080975_+	hypothetical protein	NA	NA	NA	NA
WP_099593695.1\|3081174_3081594_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_099593697.1\|3081665_3082016_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_099593699.1\|3082029_3082308_+	mercury resistance system periplasmic binding protein MerP	A0A218MNH0	uncultured_virus	2.6e-09	47.8
WP_099593701.1\|3082320_3082755_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_099593703.1\|3082789_3084472_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-35	26.7
WP_099593705.1\|3084492_3084909_+	hypothetical protein	NA	NA	NA	NA
WP_099593707.1\|3084908_3085271_+	mercuric resistance transcriptional repressor protein MerD	NA	NA	NA	NA
WP_099593710.1\|3085263_3085500_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_009405710.1\|3087604_3087940_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_009405708.1\|3087936_3088254_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_099593717.1\|3089074_3089986_-	TrfA protein	NA	NA	NA	NA
WP_099593719.1\|3089988_3090192_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_157765891.1\|3090307_3091057_-	hypothetical protein	NA	NA	NA	NA
WP_099593723.1\|3091086_3092271_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.2e-120	54.1
3096924:3096941	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3769637 : 3869844

uncultured_Caudovirales_phage(27.03%)

lysis,tRNA,plate,holin,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070094205.1\|3769637_3771413_-\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	1.1e-12	27.9
WP_043209521.1\|3771507_3771729_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_070094221.1\|3771832_3772153_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA
WP_070094206.1\|3772321_3772795_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	3.1e-18	37.9
WP_170831806.1\|3773424_3773655_+	cold shock domain-containing protein	A0A1X9IGI9	Lactococcus_phage	6.8e-11	48.3
WP_070094208.1\|3773706_3773913_-	SlyX family protein	NA	NA	NA	NA
WP_070094209.1\|3773917_3774337_-	HIT domain-containing protein	NA	NA	NA	NA
WP_070094211.1\|3775043_3776348_+	OprD family porin	NA	NA	NA	NA
WP_070094212.1\|3776509_3778225_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_099594200.1\|3778243_3779197_+	hypothetical protein	NA	NA	NA	NA
WP_070094214.1\|3779233_3780298_-	DNA polymerase IV	NA	NA	NA	NA
WP_099593813.1\|3781023_3783666_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_070094216.1\|3783665_3784958_+	virulence factor family protein	NA	NA	NA	NA
WP_070094217.1\|3785053_3786952_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.0e-75	34.2
WP_070094218.1\|3787187_3788519_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_070094222.1\|3788611_3789070_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_070094223.1\|3789194_3789905_+	RNA-binding protein	NA	NA	NA	NA
WP_099593816.1\|3789998_3790460_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	4.6e-35	47.3
WP_070094225.1\|3790465_3791161_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_043208743.1\|3791288_3792068_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_070094226.1\|3792188_3793115_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043208747.1\|3793115_3793478_-	diacylglycerol kinase	NA	NA	NA	NA
WP_070094227.1\|3793552_3794203_-	response regulator transcription factor	NA	NA	NA	NA
WP_070094228.1\|3794459_3795170_-	DTW domain-containing protein	NA	NA	NA	NA
WP_043208752.1\|3795391_3795814_+	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA
WP_070094229.1\|3795815_3796022_-	hypothetical protein	NA	NA	NA	NA
WP_070094230.1\|3796405_3797524_+	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_070094231.1\|3797551_3798019_-	recombination regulator RecX	NA	NA	NA	NA
WP_099593818.1\|3798027_3799095_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	7.5e-113	62.0
WP_070094576.1\|3799201_3799684_-	CinA family protein	B5TK85	Pseudomonas_phage	8.8e-61	79.5
WP_070094598.1\|3799743_3800241_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	1.2e-33	56.6
WP_070094577.1\|3800237_3800786_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	1.9e-72	69.6
WP_081337538.1\|3800864_3801380_-	hypothetical protein	NA	NA	NA	NA
WP_139139923.1\|3801481_3802234_-	hypothetical protein	NA	NA	NA	NA
WP_070094579.1\|3803413_3803620_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.6e-19	67.2
WP_070094580.1\|3803594_3804440_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.4e-77	52.9
WP_070094582.1\|3806785_3807088_-\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.2e-23	62.8
WP_070094583.1\|3807100_3807610_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	1.9e-61	68.3
WP_070094584.1\|3807622_3808789_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	1.2e-177	80.1
WP_081337540.1\|3808874_3809300_-\|tail	phage tail protein	A0A291LAV4	Bordetella_phage	8.6e-28	47.1
WP_081337539.1\|3809318_3811025_-\|tail	phage tail protein	A0A077K818	Ralstonia_phage	8.1e-85	53.8
WP_070094586.1\|3811017_3811626_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	4.2e-68	62.4
WP_070094587.1\|3811627_3812509_-\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	5.8e-111	70.2
WP_070094588.1\|3812505_3812832_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.8e-33	64.2
WP_070094589.1\|3813020_3813578_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	6.0e-53	58.0
WP_070094590.1\|3813574_3814072_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	6.8e-16	32.7
WP_070094591.1\|3814083_3814422_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	8.9e-44	80.0
WP_070094592.1\|3814886_3815633_-	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	5.4e-118	83.5
WP_070094593.1\|3815769_3816666_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_070094594.1\|3816667_3818053_-	amino acid permease	NA	NA	NA	NA
WP_070094595.1\|3818289_3819090_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_070094596.1\|3819243_3821814_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	1.7e-25	23.0
WP_016392282.1\|3821954_3822278_+	ferredoxin family protein	NA	NA	NA	NA
WP_043208809.1\|3823494_3824502_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.6e-34	35.8
WP_070094103.1\|3824611_3825472_-	peptidoglycan DD-metalloendopeptidase family protein	I3PV79	Clostridium_phage	4.6e-12	35.3
WP_170831805.1\|3825658_3826297_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.3e-40	51.2
WP_070094105.1\|3826335_3827085_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	4.9e-66	51.8
WP_070094106.1\|3827072_3828131_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_070094107.1\|3828127_3828601_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_070094108.1\|3828724_3829579_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_070094109.1\|3829587_3830700_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	4.7e-33	29.1
WP_070094110.1\|3830808_3831705_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_070094111.1\|3831818_3832526_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_070094112.1\|3832522_3832804_-	cell division protein FtsB	NA	NA	NA	NA
WP_070094113.1\|3832961_3834251_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.6e-138	59.4
WP_070094114.1\|3834400_3835246_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	5.9e-52	43.3
WP_070094115.1\|3835249_3836878_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.0e-158	53.1
WP_070094116.1\|3837147_3838443_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_070094117.1\|3838569_3839517_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_070094118.1\|3839622_3843147_-	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	2.1e-196	36.1
WP_070094119.1\|3843335_3843959_-	ribonuclease HII	E3T5H8	Cafeteria_roenbergensis_virus	1.6e-22	42.6
WP_099593821.1\|3843960_3845088_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_070094121.1\|3845089_3845866_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_003252314.1\|3845862_3846303_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_070094122.1\|3846416_3847472_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_043208855.1\|3847473_3847977_-	OmpH family outer membrane protein	NA	NA	NA	NA
WP_070094123.1\|3848021_3850373_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_070094124.1\|3850452_3851805_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_070094125.1\|3851880_3853071_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_070094126.1\|3853067_3853883_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_070094127.1\|3853882_3854638_-	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	5.0e-18	38.1
WP_070094128.1\|3854654_3855212_-	ribosome recycling factor	NA	NA	NA	NA
WP_043208871.1\|3855208_3855952_-	UMP kinase	NA	NA	NA	NA
WP_070094129.1\|3856132_3856996_-	elongation factor Ts	NA	NA	NA	NA
WP_043208878.1\|3857181_3857919_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_070094130.1\|3858266_3859049_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_070094131.1\|3859080_3861783_+	[protein-PII] uridylyltransferase	NA	NA	NA	NA
WP_070094132.1\|3861813_3863007_+	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_139139906.1\|3863100_3863841_+	peptidase M12	NA	NA	NA	NA
WP_070094134.1\|3863846_3865493_-	Na+/H+ antiporter	NA	NA	NA	NA
WP_099593823.1\|3865764_3866112_+	ArsC family reductase	NA	NA	NA	NA
WP_043208895.1\|3866153_3867188_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_070094136.1\|3867267_3868473_+	cysteine desulfurase	Q2XUY6	environmental_halophage	8.1e-71	37.1
WP_070094137.1\|3868469_3868880_+	SufE family protein	NA	NA	NA	NA
WP_070094138.1\|3869034_3869844_-\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	A0A291ATS8	Pandoravirus	5.0e-16	32.9

DBSCAN-SWA_8

4052290 : 4060040

Planktothrix_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043213285.1\|4052290_4053100_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.4e-25	32.5
WP_070093004.1\|4053333_4054311_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.3e-34	32.7
WP_070093005.1\|4054325_4054850_+	HAD family hydrolase	A0A140XBD6	Dickeya_phage	1.1e-27	48.1
WP_070093006.1\|4054858_4055431_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_043213272.1\|4055417_4055942_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_043213270.1\|4055942_4056668_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.4e-23	26.5
WP_070093007.1\|4056825_4058319_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_043213265.1\|4058396_4058705_+	ribosome-associated translation inhibitor RaiA	A0A0M7QH33	Escherichia_phage	5.7e-05	34.1
WP_070093008.1\|4058717_4059182_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_070093009.1\|4059185_4060040_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	6.9e-08	31.9

DBSCAN-SWA_9

5385361 : 5446970

Pseudomonas_phage(63.33%)

lysis,head,plate,integrase,holin,capsid,portal,terminase,tail

attL 5415387:5415435|attR 5447066:5447114

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070090751.1\|5385361_5386306_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_070090752.1\|5386471_5387356_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_070090753.1\|5387375_5388341_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_070090754.1\|5388351_5388822_+	thioesterase family protein	NA	NA	NA	NA
WP_043211060.1\|5389201_5389459_+	hypothetical protein	NA	NA	NA	NA
WP_099593996.1\|5389659_5390766_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_070090756.1\|5391156_5392533_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_070090757.1\|5392975_5393923_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_170831707.1\|5394013_5394862_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_043211046.1\|5396163_5396934_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_043211043.1\|5396943_5397681_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_070090760.1\|5397708_5397969_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_043211039.1\|5397969_5398608_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_043211130.1\|5398607_5399201_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_070090761.1\|5399466_5401707_+	AsmA family protein	NA	NA	NA	NA
WP_070090762.1\|5401703_5402771_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_043211032.1\|5402767_5403040_+	oxidative damage protection protein	NA	NA	NA	NA
WP_070090763.1\|5403422_5403884_+	DUF4234 domain-containing protein	NA	NA	NA	NA
WP_099593998.1\|5403962_5404283_+	hypothetical protein	A0A2K9VCM1	Lactobacillus_phage	3.4e-08	36.1
WP_170831708.1\|5404556_5405429_+	polyphosphate kinase 2	NA	NA	NA	NA
WP_070090765.1\|5405517_5405961_+	hypothetical protein	NA	NA	NA	NA
WP_070090766.1\|5406116_5407517_-	GABA permease	NA	NA	NA	NA
WP_070090767.1\|5408123_5408897_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	3.2e-20	32.0
WP_070090768.1\|5408908_5409661_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_070090769.1\|5409716_5410409_+	ABC transporter permease	NA	NA	NA	NA
WP_070090770.1\|5410408_5411098_+	ABC transporter permease	NA	NA	NA	NA
WP_070090771.1\|5411226_5412462_+	methyltransferase	NA	NA	NA	NA
WP_070090772.1\|5412685_5413003_-	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_070090773.1\|5412996_5413356_-	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_070090774.1\|5413804_5414386_+	hypothetical protein	NA	NA	NA	NA
WP_043211003.1\|5414395_5414602_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_070090775.1\|5414620_5415001_+	hypothetical protein	NA	NA	NA	NA
WP_070090776.1\|5415022_5415271_+	hypothetical protein	NA	NA	NA	NA
5415387:5415435	attL	NA	NA	NA	NA
WP_099594215.1\|5416056_5416416_+	hypothetical protein	NA	NA	NA	NA
WP_099594001.1\|5416917_5417166_+	hypothetical protein	NA	NA	NA	NA
WP_099594003.1\|5417162_5417459_+	hypothetical protein	NA	NA	NA	NA
WP_099594005.1\|5418260_5419232_-	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	1.1e-110	63.4
WP_099594007.1\|5419204_5419915_-	hypothetical protein	A0A1D9CA29	Salinivibrio_phage	1.1e-38	39.5
WP_099594009.1\|5419911_5420457_-	DNA-binding protein	A0A0U4J942	Pseudomonas_phage	5.3e-54	64.6
WP_099594011.1\|5420453_5421374_-	hypothetical protein	NA	NA	NA	NA
WP_099594014.1\|5421370_5421901_-	hypothetical protein	R9U4D4	Rhizobium_phage	1.5e-08	34.5
WP_172959811.1\|5421913_5423527_-\|tail	phage tail protein	A0A0U4K5K2	Pseudomonas_phage	2.8e-119	66.5
WP_099594016.1\|5423535_5424060_-\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	3.9e-78	80.5
WP_099594018.1\|5424052_5425222_-\|plate	baseplate J/gp47 family protein	A0A0U4JJ14	Pseudomonas_phage	3.0e-163	73.2
WP_099594020.1\|5425218_5425548_-	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	3.7e-34	75.2
WP_099594022.1\|5425547_5427533_-\|tail	phage tail tape measure protein	A0A0U4IJ81	Pseudomonas_phage	8.8e-123	40.2
WP_099594024.1\|5427701_5427992_-	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	1.9e-26	68.9
WP_099594027.1\|5427988_5428480_-\|lysis	lysis protein	A0A0U4JXC2	Pseudomonas_phage	3.9e-16	40.9
WP_099594029.1\|5428476_5429001_-	lysozyme	NA	NA	NA	NA
WP_099594031.1\|5428997_5429204_-	hypothetical protein	NA	NA	NA	NA
WP_099594032.1\|5429200_5429419_-	TraR/DksA C4-type zinc finger protein	A0A0U4IIN4	Pseudomonas_phage	4.0e-13	58.5
WP_099594034.1\|5429418_5429868_-	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	3.1e-60	77.7
WP_099594036.1\|5429880_5430987_-	DUF2586 family protein	A0A0U4KLE6	Pseudomonas_phage	1.5e-135	66.4
WP_099594038.1\|5431002_5431683_-	phage virion morphogenesis protein	A0A0U4ISN1	Pseudomonas_phage	2.5e-61	60.8
WP_099594040.1\|5431672_5432125_-\|tail	phage tail protein	A0A0U4IBS7	Pseudomonas_phage	1.3e-37	57.7
WP_099594042.1\|5432121_5432601_-	hypothetical protein	NA	NA	NA	NA
WP_099594044.1\|5432597_5433059_-\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	7.4e-41	56.2
WP_099594046.1\|5433155_5433887_-\|terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	2.2e-71	62.4
WP_099594048.1\|5433883_5434906_-\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	3.3e-118	63.9
WP_099594051.1\|5434907_5435831_-\|capsid	GPO family capsid scaffolding protein	A0A0U4JVV6	Pseudomonas_phage	2.8e-63	59.1
WP_099594053.1\|5437887_5438829_+\|portal	phage portal protein	A0A0U4B0L9	Pseudomonas_phage	2.2e-100	75.5
WP_099594055.1\|5438900_5439161_+	ogr/Delta-like zinc finger family protein	A5X9H0	Aeromonas_virus	3.3e-14	42.2
WP_099594057.1\|5439208_5439391_-	hypothetical protein	NA	NA	NA	NA
WP_099594059.1\|5439478_5439835_-	transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	3.4e-17	45.7
WP_099594217.1\|5439818_5440343_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	8.5e-17	43.4
WP_004576333.1\|5440259_5440460_+	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	2.9e-10	50.8
WP_099594062.1\|5440490_5440970_+	hypothetical protein	Q9ZXJ2	Pseudomonas_virus	2.0e-33	51.3
WP_099594064.1\|5440966_5441206_+	hypothetical protein	NA	NA	NA	NA
WP_099594066.1\|5441273_5441507_+	hypothetical protein	NA	NA	NA	NA
WP_099594220.1\|5441515_5444203_+	toprim domain-containing protein	A0A2H4J936	uncultured_Caudovirales_phage	7.9e-268	51.9
WP_099594068.1\|5444208_5444472_+	hypothetical protein	NA	NA	NA	NA
WP_099594071.1\|5444550_5444826_+	hypothetical protein	NA	NA	NA	NA
WP_099594222.1\|5444855_5445254_+	DUF2528 family protein	NA	NA	NA	NA
WP_099594225.1\|5445585_5445798_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_099594073.1\|5445794_5446970_+\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	5.8e-74	40.9
5447066:5447114	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP016446

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016446_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016446_1

4303-4459

Orphan

Consensus_repeat	Method
CGGTTCGTCACTCCAGGGACCGC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP016446_1

>merge|NZ_CP016446|1|4303-4459|CRISPRCasFinder
GCATTCGTCACTCCAGGGACCGCGCCCAATTTCGCGGCCTAGCCGGTTCGTCACTCCAGGGACCGCGATTCGTCACTCTAGGGACCGCCGATTCGTCACTTCGGGGACTGGGGTTCGTCACTCCAGGGACCGCCTATTTCGTCACTCCGGGGACCAG

>NZ_CP016446|1|1|4303-4459|CRISPRCasFinder
GCATTCGTCACTCCAGGGACCGC	GCCCAATTTCGCGGCCTAGC
CGGTTCGTCACTCCAGGGACCGC	GATTCGTCACTCTAGGGACCGC
CGATTCGTCACTTCGGGGACTGG	GGTTCGTCACTCCAGGGACCGCC
TATTTCGTCACTCCGGGGACCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016446.1\|WP_015272393.1\|3044_4181_+\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|370826
NZ_CP016446.1\|WP_096862040.1\|11235_12279_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|226077
NZ_CP016446.1\|WP_015648284.1\|16846_17407_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP016446.1\|WP_000376623.1\|9205_9706_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP016446.1\|WP_099592735.1\|14508_15246_-\|DIM/SIM/IMP-family-subclass-B1-metallo-beta-lactamase	unknown	unknown	gnl\|CDD\|293859
NZ_CP016446.1\|WP_015272388.1\|742_1831_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP016446.1\|WP_000259031.1\|9833_10673_-\|sulfonamide-resistant-dihydropteroate-synthase-Sul1	unknown	unknown	gnl\|CDD\|184303
NZ_CP016446.1\|WP_000845048.1\|15398_16412_+\|class-1-integron-integrase-IntI1	unknown	unknown	gnl\|CDD\|185315
NZ_CP016446.1\|WP_096862041.1\|12518_13358_-\|AadA-family-aminoglycoside-3''-O-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|184296
NZ_CP016446.1\|WP_015272386.1\|20_389_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016446.1\|WP_015272389.1\|1841_2102_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016446.1\|WP_015272392.1\|2440_3058_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP016446.1\|WP_015272387.1\|421_739_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016446.1\|WP_000415714.1\|13506_14163_-\|quinolone-resistance-pentapeptide-repeat-protein-QnrVC1	unknown	unknown	gnl\|CDD\|224276
NZ_CP016446.1\|WP_001389365.1\|7934_8699_-\|IS6-like-element-IS6100-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP016446.1\|WP_000679427.1\|10666_11014_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1	unknown	unknown	gnl\|CDD\|279265

Protein	Function_ID	Function_description	E-value
NZ_CP016446.1\|WP_096862040.1\|11235_12279_+\|IS110-family-transposase	gnl\|CDD\|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.11435e-29
NZ_CP016446.1\|WP_015272393.1\|3044_4181_+\|replication-initiator-protein-A	gnl\|CDD\|370826	pfam10134, RPA, Replication initiator protein A. Members of this family of bacterial proteins are single-stranded DNA binding proteins that are involved in DNA replication, repair and recombination.	1.64628e-66
NZ_CP016446.1\|WP_000679427.1\|10666_11014_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1	gnl\|CDD\|279265	pfam00893, Multi_Drug_Res, Small Multidrug Resistance protein. This family is the Small Multidrug Resistance (SMR) family. Several members have been shown to export a range of toxins, including ethidium bromide and quaternary ammonium compounds, through coupling with proton influx.	4.88768e-29
NZ_CP016446.1\|WP_015648284.1\|16846_17407_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	4.69578e-52
NZ_CP016446.1\|WP_099592735.1\|14508_15246_-\|DIM/SIM/IMP-family-subclass-B1-metallo-beta-lactamase	gnl\|CDD\|293859	cd16301, IMP_DIM-like_MBL-B1, IMP-1, DIM-1, GIM-1, SIM-1, TMB-1 and related metallo-beta-lactamases, subclass B1; MBL-fold metallo-hydrolase domain. Includes the acquired MBLs IMP-1(a beta-lactamase that is active on imipenem), DIM-1 (Dutch imipenemase), GIM-1 (German imipenemase), KHM-1 (Kyorin Health Science MBL 1), SIM-1 (Seoul imipenemase), and TMB-1 (Tripoli metallo-beta-lactamase). IMP-1, DIM-1, GIM-1, SIM-1, and TMB-1 are Class 1 integron-mediated MBLs, KMH-1 is plasmid-mediated. MBLs (class B of the Ambler beta-lactamase classification) are a diverse group of metallo-enzymes that are capable of catalyzing the hydrolysis of a wide range of beta-lactam antibiotics. MBLs have been divided into three subclasses B1, B2 and B3, based on sequence/structural relationships and substrates, with the B1 and B2 MBLs being most closely related to each other. This subgroup of acquired MBLs belongs to the B1 subclass. B1 enzymes are most active with two zinc ions bound in the active site, and have a broad-spectrum substrate profile.	4.66226e-109
NZ_CP016446.1\|WP_015272388.1\|742_1831_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	0.000253158
NZ_CP016446.1\|WP_000259031.1\|9833_10673_-\|sulfonamide-resistant-dihydropteroate-synthase-Sul1	gnl\|CDD\|184303	PRK13753, PRK13753, dihydropteroate synthase; Provisional.	0
NZ_CP016446.1\|WP_000845048.1\|15398_16412_+\|class-1-integron-integrase-IntI1	gnl\|CDD\|185315	PRK15417, PRK15417, integron integrase.	0
NZ_CP016446.1\|WP_096862041.1\|12518_13358_-\|AadA-family-aminoglycoside-3''-O-nucleotidyltransferase	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	6.82054e-165
NZ_CP016446.1\|WP_000376623.1\|9205_9706_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.40463e-13
NZ_CP016446.1\|WP_015272392.1\|2440_3058_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	7.50873e-55
NZ_CP016446.1\|WP_001389365.1\|7934_8699_-\|IS6-like-element-IS6100-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.97603e-67
NZ_CP016446.1\|WP_000415714.1\|13506_14163_-\|quinolone-resistance-pentapeptide-repeat-protein-QnrVC1	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.98653e-20

>NZ_CP016446.1|WP_015272393.1|3044_4181_+|replication-initiator-protein-A
MSSNELFDIDPDLATSPLPKRRSAAKAPLVGQDAINIDKWRKRIEAEARPGETYQQAAERLKREEAKQPKDKTPGREAVKASAGRKQVVVLETQLDFWIATGLPAIPKDERPTMEHPIYAVEDGDTRQITYEHNGNKIEIIPSVAGRATQHDKDIVLFCVSKLVAAINAGIAVSPTIETTAHELLSFTRSSTSERGYELLSKAFDRLTGTRMRATFESTKDRDGSRRWVGLLDDVEIITRGAKNRMCAIRIKVSDTTFNAAKAMDVLTIPGDYFGLRSAIAKRIYELCRKHCGGQGQWKIGLTLLQKKVGSAQAEKKFRAKVKELAEAGSLLDYYMTYLPDEDAVLFFNKSDAGKAALLKATRNGIKTPRKAKAAPAA
>NZ_CP016446.1|WP_015272392.1|2440_3058_+|recombinase-family-protein
MRNGKDSSTLDILTGGLRIGYARTSKQDQNLDLQRDALVAAGCTRIYEEQISGARANRPELEQMLKALRPGDTVVVWQLSRFGRSLSHLLQLMAQLEAMQVRFESLTEHIDTSTAGGRMQLNVFATLAEYERELNRERTMAGLEAARARGRKGGRKPTLGAKEIRDIKILLADPLTTVSDVAARFKVSRTTIYKYLSKEAQHVVQ
>NZ_CP016446.1|WP_015272389.1|1841_2102_+|hypothetical-protein
MPKPKRPNMTLREQEDAAKIQCYDWNAQYKEGVTVTYEELLGSGESIQTKTCGRAFVMCCEPVIMVEDVSGAVSLDHCTVVAEEAA
>NZ_CP016446.1|WP_015272388.1|742_1831_+|DNA-cytosine-methyltransferase
MLSTQIRPAQPGLFTAQALGVDDFELSQITAEFSAISSGELEHHLFDAPRPSEIVRLADKVARHTRSHGWLDQAAAQARIAEWKRHAFAQGEGRANADKVVLSLFDHTGQWSQPWEDAGYQVLRFDIQDNPVTGDVNEFGAGFFGDWFGDFDGLDIYAILAACPCTEFATSGARHFAAKDADGRTVAAVQLVHQTLRTIEYFRPAVWAIENPVGRIEKLGGLPPWRLAFDPHHLGDPYTKKTLLWGRFNANLPIAPVEASDGSKMHRKFGGNRLATKNARSATPEGFSYGFFMANNAQDNPALAIAYKYDRLDAGLLRAALDANVSAREIDELVADAYYMDMDDSAAESALRQAISTQNPPT
>NZ_CP016446.1|WP_015272387.1|421_739_+|hypothetical-protein
MWRYSLRWCLPHQPCPGDFELLVIEAPAGTRMPEEMHQAWQRRPVGYGVCLDFPQSRAVKRWSAEAKDRVRKQKMAKRIEKAAPLFADELIARELEQRPDYFKGE
>NZ_CP016446.1|WP_015272386.1|20_389_+|hypothetical-protein
MSAYILNRFHISAILMFTCTGKPDATTYQILADQGQQLLDENIRSVRTRYPGETFKGELFGLDETVRKPTPLEALKLIQCLEYQSNQNPDYYATQAFRTLHEIRRIAQSKLPGWDQTSWDFV
>NZ_CP016446.1|WP_001389365.1|7934_8699_-|IS6-like-element-IS6100-family-transposase
MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
>NZ_CP016446.1|WP_000376623.1|9205_9706_-|GNAT-family-N-acetyltransferase
MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLVASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAARTQGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI
>NZ_CP016446.1|WP_000259031.1|9833_10673_-|sulfonamide-resistant-dihydropteroate-synthase-Sul1
MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
>NZ_CP016446.1|WP_000679427.1|10666_11014_-|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1
MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
>NZ_CP016446.1|WP_096862040.1|11235_12279_+|IS110-family-transposase
MKRIAVDLAKSVYQVAESVRSGQVVQRKRLNREAFRRYIQEQAEPVEWVMEACGTAHYWGRVAQALGHQVRLLHPRYVRPYRRRNKTDRNDCDAMLEAARCTDIHPVPVKSHSQQQLQQLHGLRETWKKSRTQRINLLRGLLREAGIEAPASTAAFIRAASERVDQPELAPLSRLLHIVLAEINLYEQCMAECEQQLKRWHADDDIVRKLDEVSGIGLLTASALTAAVGRPERFASGRQLSAWLGMTPREFSSGERRKLGHISRQGNVYVRTLLIHGSRAALLAAQRCQARTPEKLTQLQRWAVATAARIGHNKAAVALANKLVRICWAVWCHERRFNGNWQSTKPA
>NZ_CP016446.1|WP_096862041.1|12518_13358_-|AadA-family-aminoglycoside-3''-O-nucleotidyltransferase
MSNAVPAEISVQLSLALNAIERHLESTLLAVHLYGSALDGGLKPYSDIDLLVTVAAQLDETVRQALVVDLLEISASPGQSEALRALEVTIVVHGDVVPWRYPARRELQFGEWQRKDILAGIFEPATTDVDLAILLTKVRQHSLALAGSAAEDFFNPVPEGDLFKALSDTLKLWNSQPDWEGDERNVVLTLSRIWYSAATGKIAPKDIVANWAIERLPDQHKPVLLEARQAYLGQGEDCLASRADQLAAFVHFVKHEATKLLGAMPVMSNNSYMDSPHKW
>NZ_CP016446.1|WP_000415714.1|13506_14163_-|quinolone-resistance-pentapeptide-repeat-protein-QnrVC1
MEKSKQLYNQVNFSHQDLQEHIFSNCTFIHCNFKRSNLRDTQFINCTFIEQGALEGCDFSYADLRDASFKNCQLSMSHFKGANCFGIELRDCDLKGANFSQVSFVNQVSNKMYFCSAYITGCNLSYANFEQQLIEKCDLFENRWIGANLRGASFKESDLSRGVFSEDCWEQFRVQGCDLSHSELYGLDPRKIDLTGVKICSWQQEQLLEQLGVIIVPD
>NZ_CP016446.1|WP_099592735.1|14508_15246_-|DIM/SIM/IMP-family-subclass-B1-metallo-beta-lactamase
MRISLALCLLSILNFAVAEEVLPEIKVEKLEEGIYLHTSYLEYQGNIYEKHGLVVIDDRKAYIIDTPVLAIDTERLVKWFEERNFTIGASFSTHFHSDSSGGIEWLNKNSIPTYASELTNELLKKDGKAQAKNSFNAVSFWLVKNKIEVFYPGPGHTQDNEVVWIPSKKILFGGCFVKPDGLGYLGDANLEAWPNSARKLMSKYSNAKLVIPSHSEIGNASLLKRTWEQAVKGLNDSKKTSQLSK
>NZ_CP016446.1|WP_000845048.1|15398_16412_+|class-1-integron-integrase-IntI1
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
>NZ_CP016446.1|WP_015648284.1|16846_17407_+|recombinase-family-protein
MQGQRIGYVRVSSYDQNPERQLEQVEIGKLFTDKASGKDTQRPQLEAMLGFVREGDTVVVHSMDRLARNLDDLRRLVQKLTKRGVRIEFLKEGLVFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRAAAGEPKAQLAREFNISRETLYQYLRTDD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016446_1	1.1\|4326\|20\|NZ_CP016446\|CRISPRCasFinder	4326-4345	20	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3570-3589	0	1.0
NZ_CP016446_1	1.1\|4326\|20\|NZ_CP016446\|CRISPRCasFinder	4326-4345	20	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4326-4345	0	1.0
NZ_CP016446_1	1.1\|4326\|20\|NZ_CP016446\|CRISPRCasFinder	4326-4345	20	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39910-39929	0	1.0
NZ_CP016446_1	1.1\|4326\|20\|NZ_CP016446\|CRISPRCasFinder	4326-4345	20	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1282-1301	0	1.0
NZ_CP016446_1	1.1\|4326\|20\|NZ_CP016446\|CRISPRCasFinder	4326-4345	20	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1282-1301	0	1.0
NZ_CP016446_1	1.1\|4326\|20\|NZ_CP016446\|CRISPRCasFinder	4326-4345	20	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22561-22580	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22516-22537	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3613-3634	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4369-4390	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39953-39974	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	MN961669	Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence	1322-1343	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1325-1346	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1325-1346	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22470-22492	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3658-3680	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4414-4436	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_010891	Pseudomonas sp. CT14 plasmid pCT14, complete sequence	2082-2104	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39998-40020	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	MN961669	Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence	1367-1389	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1370-1392	0	1.0
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1370-1392	0	1.0
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NC_010891	Pseudomonas sp. CT14 plasmid pCT14, complete sequence	2037-2058	1	0.955
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_MK047610	Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence	13884-13905	1	0.955
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22537-22559	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3591-3613	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4347-4369	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39931-39953	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1303-1325	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1303-1325	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP029092	Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence	41874-41896	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP027168	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence	13317-13339	1	0.957
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK047610	Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence	13929-13951	1	0.957
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22581-22602	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3548-3569	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4304-4325	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39888-39909	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	MN961669	Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence	1257-1278	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1260-1281	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1260-1281	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NC_010891	Pseudomonas sp. CT14 plasmid pCT14, complete sequence	1972-1993	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_MK047610	Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence	13819-13840	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_CP029092	Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence	41985-42006	2	0.909
NZ_CP016446_1	1.2\|4369\|22\|NZ_CP016446\|CRISPRCasFinder	4369-4390	22	NZ_CP027168	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence	13428-13449	2	0.909
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22515-22537	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3613-3635	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4369-4391	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39953-39975	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	MN961669	Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence	1322-1344	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1325-1347	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1325-1347	2	0.913
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22580-22602	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3548-3570	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4304-4326	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_010891	Pseudomonas sp. CT14 plasmid pCT14, complete sequence	1972-1994	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39888-39910	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	MN961669	Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence	1257-1279	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1260-1282	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1260-1282	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP029092	Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence	41984-42006	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP029092	Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence	41919-41941	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP027168	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence	13427-13449	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP027168	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence	13362-13384	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK047610	Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence	13819-13841	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP027175	Pseudomonas aeruginosa strain AR_0230 plasmid unnamed1	52636-52658	3	0.87
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	KY630469	Pseudomonas aeruginosa plasmid pCB58, complete sequence	22694-22716	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_KP873171	Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence	3434-3456	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP016446	Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence	4190-4212	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_010891	Pseudomonas sp. CT14 plasmid pCT14, complete sequence	1858-1880	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_019906	Pseudomonas putida HB3267 plasmid pPC9, complete sequence	39774-39796	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671725	Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence	1146-1168	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK671726	Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence	1146-1168	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP029092	Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence	42098-42120	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP027168	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence	13541-13563	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_MK047610	Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence	13704-13726	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP042181	Pseudomonas sp. KBS0802 plasmid unnamed, complete sequence	115195-115217	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	266837-266859	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NC_003350	Pseudomonas putida plasmid pWW0, complete sequence	365-387	4	0.826
NZ_CP016446_1	1.3\|4414\|23\|NZ_CP016446\|CRISPRCasFinder	4414-4436	23	NZ_CP014061	Pseudomonas monteilii strain FDAARGOS_171 plasmid unnamed, complete sequence	18255-18277	4	0.826

1. spacer 1.1|4326|20|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 0, identity: 1.0

gcccaatttcgcggcctagc	CRISPR spacer
gcccaatttcgcggcctagc	Protospacer
********************

2. spacer 1.1|4326|20|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 0, identity: 1.0

gcccaatttcgcggcctagc	CRISPR spacer
gcccaatttcgcggcctagc	Protospacer
********************

3. spacer 1.1|4326|20|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 0, identity: 1.0

gcccaatttcgcggcctagc	CRISPR spacer
gcccaatttcgcggcctagc	Protospacer
********************

4. spacer 1.1|4326|20|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 0, identity: 1.0

gcccaatttcgcggcctagc	CRISPR spacer
gcccaatttcgcggcctagc	Protospacer
********************

5. spacer 1.1|4326|20|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 0, identity: 1.0

gcccaatttcgcggcctagc	CRISPR spacer
gcccaatttcgcggcctagc	Protospacer
********************

6. spacer 1.1|4326|20|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 0, identity: 1.0

gcccaatttcgcggcctagc	CRISPR spacer
gcccaatttcgcggcctagc	Protospacer
********************

7. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

8. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

9. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

10. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

11. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to MN961669 (Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

12. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

13. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 0, identity: 1.0

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgc	Protospacer
**********************

14. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

15. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

16. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

17. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_010891 (Pseudomonas sp. CT14 plasmid pCT14, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

18. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

19. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to MN961669 (Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

20. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

21. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 0, identity: 1.0

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcc	Protospacer
***********************

22. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NC_010891 (Pseudomonas sp. CT14 plasmid pCT14, complete sequence) position: , mismatch: 1, identity: 0.955

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgt	Protospacer
*********************.

23. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_MK047610 (Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence) position: , mismatch: 1, identity: 0.955

gattcgtcactctagggaccgc	CRISPR spacer
gattcgtcactctagggaccgt	Protospacer
*********************.

24. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcg	Protospacer
**********************

25. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcg	Protospacer
**********************

26. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcg	Protospacer
**********************

27. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcg	Protospacer
**********************

28. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcg	Protospacer
**********************

29. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgcg	Protospacer
**********************

30. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP029092 (Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccacc	Protospacer
********************.**

31. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP027168 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccacc	Protospacer
********************.**

32. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK047610 (Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence) position: , mismatch: 1, identity: 0.957

ggttcgtcactccagggaccgcc	CRISPR spacer
ggttcgtcactccagggaccgtc	Protospacer
*********************.*

33. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

34. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

35. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

36. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

37. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to MN961669 (Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

38. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

39. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

40. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NC_010891 (Pseudomonas sp. CT14 plasmid pCT14, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

41. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_MK047610 (Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

42. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_CP029092 (Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

43. spacer 1.2|4369|22|NZ_CP016446|CRISPRCasFinder matches to NZ_CP027168 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

gattcgtcactctagggaccgc	CRISPR spacer
cattcgtcactccagggaccgc	Protospacer
 ***********.*********

44. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

45. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

46. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

47. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

48. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to MN961669 (Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

49. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

50. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 2, identity: 0.913

ggttcgtcactccagggaccgcc	CRISPR spacer
gattcgtcactctagggaccgcc	Protospacer
*.**********.**********

51. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

52. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

53. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

54. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_010891 (Pseudomonas sp. CT14 plasmid pCT14, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgca	Protospacer
 .********************

55. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

56. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to MN961669 (Pseudomonas monteilii strain 918607 plasmid p918607-IMP, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgca	Protospacer
 .********************

57. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

58. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

59. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP029092 (Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

60. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP029092 (Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgtc	Protospacer
..*******************.*

61. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP027168 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

62. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP027168 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgtc	Protospacer
..*******************.*

63. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK047610 (Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
cattcgtcactccagggaccgcg	Protospacer
 .********************

64. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP027175 (Pseudomonas aeruginosa strain AR_0230 plasmid unnamed1) position: , mismatch: 3, identity: 0.87

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcacttcagggaccgcc	Protospacer
..*********.***********

65. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to KY630469 (Pseudomonas aeruginosa plasmid pCB58, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

66. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_KP873171 (Pseudomonas aeruginosa PAO1 plasmid pAMBL2, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

67. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP016446 (Pseudomonas putida strain IEC33019 plasmid pIEC33019, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

68. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_010891 (Pseudomonas sp. CT14 plasmid pCT14, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

69. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_019906 (Pseudomonas putida HB3267 plasmid pPC9, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

70. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671725 (Pseudomonas mosselii strain AM/94 plasmid pMOS94, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

71. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK671726 (Pseudomonas mendocina strain 57 plasmid pAER57, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

72. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP029092 (Pseudomonas aeruginosa strain AR441 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

73. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP027168 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

74. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_MK047610 (Pseudomonas aeruginosa strain 163940 plasmid pTROUS1, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccgga	Protospacer
..*******************

75. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP042181 (Pseudomonas sp. KBS0802 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccggt	Protospacer
..******************* .

76. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccggt	Protospacer
..******************* .

77. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NC_003350 (Pseudomonas putida plasmid pWW0, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccggt	Protospacer
..******************* .

78. spacer 1.3|4414|23|NZ_CP016446|CRISPRCasFinder matches to NZ_CP014061 (Pseudomonas monteilii strain FDAARGOS_171 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.826

ggttcgtcactccagggaccgcc	CRISPR spacer
aattcgtcactccagggaccggg	Protospacer
..*******************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016634

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP016446

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection