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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017702 Lactobacillus farciminis KCTC 3681 = DSM 20184, complete genome 5 crisprs cas2,cas1,cas9,DEDDh,WYL,cas14j,csa3,cas3,DinG,csn2 0 8 4 0

Results visualization

1. NZ_CP017702
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017702_1 188690-189255 TypeII NA
8 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017702_2 1561622-1561756 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017702_3 1660448-1660530 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017702_4 1973455-1973819 TypeII NA
5 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017702_5 2368940-2369024 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 NC_021277 Fusobacterium nucleatum subsp. animalis 4_8 plasmid unnamed, complete sequence 12198-12226 6 0.793
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 NZ_CP013122 Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence 323-351 6 0.793
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 NZ_CP008814 Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence 21225-21253 6 0.793
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MK448882 Streptococcus phage Javan242, complete genome 18922-18950 6 0.793
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MK448881 Streptococcus phage Javan240, complete genome 20894-20922 6 0.793
NZ_CP017702_1 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189058-189086 29 KJ019064 Synechococcus phage ACG-2014c isolate Syn7803C98, complete genome 17185-17213 6 0.793
NZ_CP017702_1 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189058-189086 29 KF156339 Synechococcus phage S-MbCM25, complete genome 17185-17213 6 0.793
NZ_CP017702_1 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189058-189086 29 KJ019063 Synechococcus phage ACG-2014c isolate Syn7803C97, complete genome 17184-17212 6 0.793
NZ_CP017702_1 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189058-189086 29 KJ019027 Synechococcus phage ACG-2014c isolate Syn7803C43, complete genome 17176-17204 6 0.793
NZ_CP017702_1 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189058-189086 29 NC_019444 Synechococcus phage S-MbCM6, complete genome 17186-17214 6 0.793
NZ_CP017702_1 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189058-189086 29 KJ019128 Synechococcus phage ACG-2014c isolate Syn7803US88, complete genome 17185-17213 6 0.793
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 MT774382 CrAssphage cr10_1, complete genome 63085-63113 6 0.793
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NZ_CP013846 Clostridium botulinum strain A634 plasmid pRSJ19_1, complete sequence 11919-11947 6 0.793
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NZ_CP013706 Clostridium botulinum strain F160 plasmid pRSJ3_1, complete sequence 13170-13198 6 0.793
NZ_CP017702_4 4.3|1973622|30|NZ_CP017702|CRT,PILER-CR,CRISPRCasFinder 1973622-1973651 30 NZ_CP048880 Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence 27810-27839 6 0.8
NZ_CP017702_1 1.2|188793|30|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188793-188822 30 NZ_CP015177 Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence 42940-42969 7 0.767
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 NC_021325 Clostridium phage vB_CpeS-CP51, complete genome 9878-9906 7 0.759
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MT074137 Bacteroides phage DAC16, complete genome 61691-61719 7 0.759
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MT074142 Bacteroides phage DAC23, complete genome 62806-62834 7 0.759
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MT074141 Bacteroides phage DAC22, complete genome 65973-66001 7 0.759
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MT074139 Bacteroides phage DAC19, complete genome 65742-65770 7 0.759
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 MT074140 Bacteroides phage DAC20, complete genome 65742-65770 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NZ_CP014330 Xylella fastidiosa strain Fb7 plasmid unnamed, complete sequence 11298-11326 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NC_010579 Xylella fastidiosa M23 plasmid pXFAS01, complete sequence 23895-23923 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NC_020121 Xylella fastidiosa subsp. multiplex strain Riv5 plasmid pXF-RIV5, complete sequence 23895-23923 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NZ_CP040800 Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 plasmid pXFAS01, complete sequence 23895-23923 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NZ_CP016611 Xylella fastidiosa strain Salento-2 plasmid pSal2, complete sequence 17416-17444 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NZ_CP016609 Xylella fastidiosa strain Salento-1 plasmid pSal1, complete sequence 17416-17444 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NZ_CP020871 Xylella fastidiosa subsp. pauca strain De Donno plasmid pXF-De_Donno, complete sequence 8959-8987 7 0.759
NZ_CP017702_1 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189124-189152 29 NZ_CP044353 Xylella fastidiosa strain ATCC 35879 plasmid pXF879-41, complete sequence 23932-23960 7 0.759
NZ_CP017702_1 1.8|189190|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 189190-189218 29 NC_015427 Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence 11599-11627 7 0.759
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NC_011997 Macrococcus caseolyticus JCSC5402 plasmid pMCCL3, complete sequence 1892-1920 7 0.759
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 LT699705 Staphylococcus aureus strain NZ15MR0322 genome assembly, plasmid: 2 8957-8985 8 0.724
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NC_004747 Streptococcus thermophilus ST2-1 plasmid pND103, complete sequence 1910-1938 8 0.724
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NZ_KU574030 Streptococcus thermophilus strain ACA-DC 0040 plasmid pST0040, complete sequence 163-191 8 0.724
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NZ_CP046029 Staphylococcus chromogenes strain 1401 plasmid unnamed1 12211-12239 8 0.724
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NZ_LT992457 Staphylococcus aureus isolate 1_1439 plasmid II 7092-7120 8 0.724
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NZ_LT992457 Staphylococcus aureus isolate 1_1439 plasmid II 34276-34304 8 0.724
NZ_CP017702_4 4.1|1973491|29|NZ_CP017702|CRT 1973491-1973519 29 NC_000937 Streptococcus thermophilus ST135 plasmid pER35, complete sequence 85-113 8 0.724
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 NZ_CP031836 Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence 87995-88023 9 0.69
NZ_CP017702_1 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR 188860-188888 29 NZ_CP020458 Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence 89878-89906 9 0.69
NZ_CP017702_3 3.1|1660473|33|NZ_CP017702|CRISPRCasFinder 1660473-1660505 33 NZ_CP040763 Paracoccus sp. 2251 plasmid unnamed4, complete sequence 169777-169809 10 0.697

1. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NC_021277 (Fusobacterium nucleatum subsp. animalis 4_8 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

ttagaaggaattgaagaaatgattccact	CRISPR spacer
cttgaagaaattgaagaaatgattgcaaa	Protospacer
.* ****.**************** **  

2. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013122 (Fusobacterium nucleatum subsp. polymorphum strain ChDC F306 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

ttagaaggaattgaagaaatgattccact	CRISPR spacer
cttgaagaaattgaagaaatgattgcaaa	Protospacer
.* ****.**************** **  

3. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008814 (Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.793

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ttagaagaaattgaagaaataattactga	Protospacer
*******.************.*** *   

4. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MK448882 (Streptococcus phage Javan242, complete genome) position: , mismatch: 6, identity: 0.793

ttagaaggaattgaagaaatgattccact	CRISPR spacer
cttgaaggcattgaggaaatgattccttt	Protospacer
.* ***** *****.*********** .*

5. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MK448881 (Streptococcus phage Javan240, complete genome) position: , mismatch: 6, identity: 0.793

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ctggaaggcattgaggaaatgattccttt	Protospacer
.*.***** *****.*********** .*

6. spacer 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to KJ019064 (Synechococcus phage ACG-2014c isolate Syn7803C98, complete genome) position: , mismatch: 6, identity: 0.793

cgctattacgccaatttgtatggtattcc	CRISPR spacer
gtaaattacgccaatttgtttggtattac	Protospacer
    *************** ******* *

7. spacer 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to KF156339 (Synechococcus phage S-MbCM25, complete genome) position: , mismatch: 6, identity: 0.793

cgctattacgccaatttgtatggtattcc	CRISPR spacer
gtaaattacgccaatttgtttggtattac	Protospacer
    *************** ******* *

8. spacer 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to KJ019063 (Synechococcus phage ACG-2014c isolate Syn7803C97, complete genome) position: , mismatch: 6, identity: 0.793

cgctattacgccaatttgtatggtattcc	CRISPR spacer
gtaaattacgccaatttgtttggtattac	Protospacer
    *************** ******* *

9. spacer 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to KJ019027 (Synechococcus phage ACG-2014c isolate Syn7803C43, complete genome) position: , mismatch: 6, identity: 0.793

cgctattacgccaatttgtatggtattcc	CRISPR spacer
gtaaattacgccaatttgtttggtattac	Protospacer
    *************** ******* *

10. spacer 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NC_019444 (Synechococcus phage S-MbCM6, complete genome) position: , mismatch: 6, identity: 0.793

cgctattacgccaatttgtatggtattcc	CRISPR spacer
gtaaattacgccaatttgtttggtattac	Protospacer
    *************** ******* *

11. spacer 1.6|189058|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to KJ019128 (Synechococcus phage ACG-2014c isolate Syn7803US88, complete genome) position: , mismatch: 6, identity: 0.793

cgctattacgccaatttgtatggtattcc	CRISPR spacer
gtaaattacgccaatttgtttggtattac	Protospacer
    *************** ******* *

12. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to MT774382 (CrAssphage cr10_1, complete genome) position: , mismatch: 6, identity: 0.793

actacttgatacttttagaaataattatt	CRISPR spacer
gaatcttgatacttttataaataattttt	Protospacer
.   ************* ******** **

13. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NZ_CP013846 (Clostridium botulinum strain A634 plasmid pRSJ19_1, complete sequence) position: , mismatch: 6, identity: 0.793

actacttgatacttttagaaataattatt	CRISPR spacer
atctttttatacttttagaaataaatatt	Protospacer
*.. .** **************** ****

14. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NZ_CP013706 (Clostridium botulinum strain F160 plasmid pRSJ3_1, complete sequence) position: , mismatch: 6, identity: 0.793

actacttgatacttttagaaataattatt	CRISPR spacer
atctttttatacttttagaaataaatatt	Protospacer
*.. .** **************** ****

15. spacer 4.3|1973622|30|NZ_CP017702|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048880 (Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence) position: , mismatch: 6, identity: 0.8

tcaactaaacgttgaatacgcatcaaatat	CRISPR spacer
cccattaaactttgaatacgcagcaaataa	Protospacer
.* *.***** *********** ****** 

16. spacer 1.2|188793|30|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 7, identity: 0.767

ggataagtattttcaaagcaattcaggata	CRISPR spacer
agataaatattttcatagcaattccgcttt	Protospacer
.*****.******** ******** *  * 

17. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NC_021325 (Clostridium phage vB_CpeS-CP51, complete genome) position: , mismatch: 7, identity: 0.759

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ttagaagaaattgaagaaatgagtgagaa	Protospacer
*******.************** *  .  

18. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 7, identity: 0.759

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ataaaaggaattgaagaaataattactaa	Protospacer
 **.****************.*** *   

19. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 7, identity: 0.759

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ataaaaggaattgaagaaataattactaa	Protospacer
 **.****************.*** *   

20. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 7, identity: 0.759

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ataaaaggaattgaagaaataattactaa	Protospacer
 **.****************.*** *   

21. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 7, identity: 0.759

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ataaaaggaattgaagaaataattactaa	Protospacer
 **.****************.*** *   

22. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 7, identity: 0.759

ttagaaggaattgaagaaatgattccact	CRISPR spacer
ataaaaggaattgaagaaataattactaa	Protospacer
 **.****************.*** *   

23. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014330 (Xylella fastidiosa strain Fb7 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

24. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NC_010579 (Xylella fastidiosa M23 plasmid pXFAS01, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

25. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NC_020121 (Xylella fastidiosa subsp. multiplex strain Riv5 plasmid pXF-RIV5, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

26. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040800 (Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 plasmid pXFAS01, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

27. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016611 (Xylella fastidiosa strain Salento-2 plasmid pSal2, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

28. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016609 (Xylella fastidiosa strain Salento-1 plasmid pSal1, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

29. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020871 (Xylella fastidiosa subsp. pauca strain De Donno plasmid pXF-De_Donno, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

30. spacer 1.7|189124|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044353 (Xylella fastidiosa strain ATCC 35879 plasmid pXF879-41, complete sequence) position: , mismatch: 7, identity: 0.759

gcaaccgatgagaaagccaagcaatcagt	CRISPR spacer
gaaacagatgagaaagccaaacaatgctg	Protospacer
* *** **************.****    

31. spacer 1.8|189190|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NC_015427 (Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence) position: , mismatch: 7, identity: 0.759

taactttatgaattcgaaaaggctgctcg	CRISPR spacer
aagatttataaattctaaaaggctgctta	Protospacer
 *. *****.***** ***********..

32. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NC_011997 (Macrococcus caseolyticus JCSC5402 plasmid pMCCL3, complete sequence) position: , mismatch: 7, identity: 0.759

actacttgatacttttagaaataattatt	CRISPR spacer
ttgtcttgatactattagaaataattcta	Protospacer
 .  ********* ************ * 

33. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to LT699705 (Staphylococcus aureus strain NZ15MR0322 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttgtcttgatactattagaaataattcga	Protospacer
 .  ********* ************   

34. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NC_004747 (Streptococcus thermophilus ST2-1 plasmid pND103, complete sequence) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttatcttgatactattagaaataattcac	Protospacer
 .  ********* ************  .

35. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NZ_KU574030 (Streptococcus thermophilus strain ACA-DC 0040 plasmid pST0040, complete sequence) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttatcttgatactattagaaataattcac	Protospacer
 .  ********* ************  .

36. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NZ_CP046029 (Staphylococcus chromogenes strain 1401 plasmid unnamed1) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttgtcttgatactattagaaataattcga	Protospacer
 .  ********* ************   

37. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NZ_LT992457 (Staphylococcus aureus isolate 1_1439 plasmid II) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttgtcttgatactattagaaataattcga	Protospacer
 .  ********* ************   

38. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NZ_LT992457 (Staphylococcus aureus isolate 1_1439 plasmid II) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttgtcttgatactattagaaataattcga	Protospacer
 .  ********* ************   

39. spacer 4.1|1973491|29|NZ_CP017702|CRT matches to NC_000937 (Streptococcus thermophilus ST135 plasmid pER35, complete sequence) position: , mismatch: 8, identity: 0.724

actacttgatacttttagaaataattatt	CRISPR spacer
ttatcttgatactattagaaataattcac	Protospacer
 .  ********* ************  .

40. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.69

ttagaaggaattgaagaaatgattccact	CRISPR spacer
aaagaaggaattgaagaaacgataattta	Protospacer
  *****************.***  . . 

41. spacer 1.3|188860|29|NZ_CP017702|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 9, identity: 0.69

ttagaaggaattgaagaaatgattccact	CRISPR spacer
aaagaaggaattgaagaaacgataattta	Protospacer
  *****************.***  . . 

42. spacer 3.1|1660473|33|NZ_CP017702|CRISPRCasFinder matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

aaaagtcatggaatacgggcgctatgcgccccc	CRISPR spacer
taaagtcatggaactcgggcgctatctttacga	Protospacer
 ************. ********** . . *  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 347223 : 357114 10 Bacillus_virus(37.5%) transposase NA
DBSCAN-SWA_2 415342 : 423201 9 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_3 867356 : 903045 49 Lactobacillus_phage(40.0%) transposase,portal,terminase,capsid,integrase attL 856976:856991|attR 890210:890225
DBSCAN-SWA_4 966417 : 998501 50 Lactobacillus_phage(50.0%) portal,terminase,protease,tail,capsid,integrase attL 955901:955915|attR 983157:983171
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage