CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023963	Klebsiella aerogenes strain FDAARGOS_363 chromosome, complete genome	4 crisprs	DEDDh,RT,WYL,DinG,cas3,csa3	1	2	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023963_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023963_1

886389-886506

Orphan

Consensus_repeat	Method
GGTAGCCCGGATAAGGCGCAAGCCGCCATCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023963_1

>merge|NZ_CP023963|1|886389-886506|CRISPRCasFinder
GGTAGCCCGGATAAGGCGCAAGCCGCCATCCGCGAACCTCTCCCCGGTGGCGCTGCGCTTACCGGGGCTACAAACCGGAGCGGACCGGTAGCCCGGATAAGGCGCCAGCCGCCATCCG

>NZ_CP023963|1|1|886389-886506|CRISPRCasFinder
GGTAGCCCGGATAAGGCGCAAGCCGCCATCCG	CGAACCTCTCCCCGGTGGCGCTGCGCTTACCGGGGCTACAAACCGGAGCGGACC
GGTAGCCCGGATAAGGCGCCAGCCGCCATCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023963.1\|WP_015368307.1\|892970_893840_+\|citrate-(pro-3S)-lyase-subunit-beta	unknown	unknown	gnl\|CDD\|130649
NZ_CP023963.1\|WP_047740269.1\|886520_887822_-\|oxaloacetate-decarboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|185373
NZ_CP023963.1\|WP_012542888.1\|892680_892974_+\|citrate-lyase-acyl-carrier-protein	unknown	unknown	gnl\|CDD\|237316
NZ_CP023963.1\|WP_015704365.1\|896515_897337_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP023963.1\|WP_045359116.1\|893850_895377_+\|citrate-lyase-subunit-alpha	unknown	unknown	gnl\|CDD\|225593
NZ_CP023963.1\|WP_047058061.1\|882279_883212_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP023963.1\|WP_015703617.1\|889619_889868_-\|oxaloacetate-decarboxylase-subunit-gamma	unknown	unknown	gnl\|CDD\|235086
NZ_CP023963.1\|WP_086557093.1\|891621_892650_+\|[citrate-(pro-3S)-lyase]-ligase	unknown	unknown	gnl\|CDD\|129230
NZ_CP023963.1\|WP_020079641.1\|874783_875722_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
NZ_CP023963.1\|WP_045358820.1\|883304_883934_+\|alanyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|178546
NZ_CP023963.1\|WP_045388739.1\|878606_879869_+\|SLC13/DASS-family-transporter	unknown	unknown	gnl\|CDD\|238535
NZ_CP023963.1\|WP_047464678.1\|875988_877044_+\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
NZ_CP023963.1\|WP_015704367.1\|897792_898941_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP023963.1\|WP_032713323.1\|883939_884644_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP023963.1\|WP_098949158.1\|887837_889604_-\|sodium-extruding-oxaloacetate-decarboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|237592
NZ_CP023963.1\|WP_086557090.1\|877088_878522_+\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP023963.1\|WP_042893961.1\|890025_891366_-\|citrate/sodium-symporter-CitS	unknown	unknown	gnl\|CDD\|226024
NZ_CP023963.1\|WP_086557091.1\|879924_882210_+\|hydratase	unknown	unknown	gnl\|CDD\|183125
NZ_CP023963.1\|WP_045358831.1\|873865_874780_+\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
NZ_CP023963.1\|WP_045358816.1\|884636_886265_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827

Protein	Function_ID	Function_description	E-value
NZ_CP023963.1\|WP_015368307.1\|892970_893840_+\|citrate-(pro-3S)-lyase-subunit-beta	gnl\|CDD\|130649	TIGR01588, Citrate_lyase_subunit_beta, citrate lyase, beta subunit. This is a model of the beta subunit of the holoenzyme citrate lyase (EC 4.1.3.6) composed of alpha (EC 2.8.3.10), beta (EC 4.1.3.34), and acyl carrier protein subunits in a stoichiometric relationship of 6:6:6. Citrate lyase is an enzyme which converts citrate to oxaloacetate. In bacteria, this reaction is involved in citrate fermentation. The beta subunit catalyzes the reaction (3S)-citryl-CoA = acetyl-CoA + oxaloacetate. The seed contains an experimentally characterized member from Leuconostoc mesenteroides. The model covers a wide range of Gram positive bacteria. For Gram negative bacteria, it appears that only gamma proteobacteria hit this model. The model is quite robust with queries scoring either quite well or quite poorly against the model. There are currently no hits in-between the noise cutoff and trusted cutoff. [Energy metabolism, Fermentation].	1.15181e-178
NZ_CP023963.1\|WP_047740269.1\|886520_887822_-\|oxaloacetate-decarboxylase-subunit-beta	gnl\|CDD\|185373	PRK15476, PRK15476, oxaloacetate decarboxylase subunit beta; Provisional.	0
NZ_CP023963.1\|WP_012542888.1\|892680_892974_+\|citrate-lyase-acyl-carrier-protein	gnl\|CDD\|237316	PRK13253, PRK13253, citrate lyase subunit gamma; Provisional.	4.26836e-43
NZ_CP023963.1\|WP_015704365.1\|896515_897337_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	6.4808e-142
NZ_CP023963.1\|WP_045359116.1\|893850_895377_+\|citrate-lyase-subunit-alpha	gnl\|CDD\|225593	COG3051, CitF, Citrate lyase, alpha subunit [Energy production and conversion].	0
NZ_CP023963.1\|WP_047058061.1\|882279_883212_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.6908e-68
NZ_CP023963.1\|WP_015703617.1\|889619_889868_-\|oxaloacetate-decarboxylase-subunit-gamma	gnl\|CDD\|235086	PRK02919, PRK02919, oxaloacetate decarboxylase subunit gamma; Provisional.	2.67887e-42
NZ_CP023963.1\|WP_086557093.1\|891621_892650_+\|[citrate-(pro-3S)-lyase]-ligase	gnl\|CDD\|129230	TIGR00124, -lyase]_ligase, [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	0
NZ_CP023963.1\|WP_020079641.1\|874783_875722_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.65439e-79
NZ_CP023963.1\|WP_045358820.1\|883304_883934_+\|alanyl-tRNA-synthetase	gnl\|CDD\|178546	PLN02961, PLN02961, alanine-tRNA ligase.	1.41177e-31
NZ_CP023963.1\|WP_045388739.1\|878606_879869_+\|SLC13/DASS-family-transporter	gnl\|CDD\|238535	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.	1.12136e-108
NZ_CP023963.1\|WP_047464678.1\|875988_877044_+\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
NZ_CP023963.1\|WP_015704367.1\|897792_898941_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP023963.1\|WP_032713323.1\|883939_884644_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	4.59953e-107
NZ_CP023963.1\|WP_098949158.1\|887837_889604_-\|sodium-extruding-oxaloacetate-decarboxylase-subunit-alpha	gnl\|CDD\|237592	PRK14040, PRK14040, oxaloacetate decarboxylase subunit alpha.	0
NZ_CP023963.1\|WP_086557090.1\|877088_878522_+\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	1.24448e-172
NZ_CP023963.1\|WP_042893961.1\|890025_891366_-\|citrate/sodium-symporter-CitS	gnl\|CDD\|226024	COG3493, CitS, Na+/citrate symporter [Energy production and conversion].	0
NZ_CP023963.1\|WP_086557091.1\|879924_882210_+\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
NZ_CP023963.1\|WP_045358831.1\|873865_874780_+\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
NZ_CP023963.1\|WP_045358816.1\|884636_886265_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	0

>NZ_CP023963.1|WP_045358816.1|884636_886265_-|sensor-histidine-kinase
MSTRKITHWFARRSFQNRIFLLILFTSTVVMLAMSWYLTDITEERLHYQVGQRALIQAMQISAMPELVEAVQKRDLARIKELIDPMRSFSDATYITVGDAQGRRLYHVNPDEIGKSMEGGDSDEALYNAKSYVSVRKGSLGSSLRGKSPIQDASGKVIGIVSVGYTIEQLENWLSLQISSLLIPMAIILLLLLYCARRFSLHIKKQMLNMEPQQLSQLLIQQSVLFESVFEGLIAIDSNYKITAINQTARRLLNLSQPEPTLIGKGISSVISQEAFFYDAPHENKKDAIVTFNQIKVIASRMAVILNNAPQGWVISFRSKDDINTLSLQLSQVQQYADNLRAVQHEHRNLISTIAGLLFLKRYDHALDLIQQQSESHQKVLDFIARNFQDNHLAGLLIGKYYRAKELGLELVFDPSCFVDKLPGALSHSEWISIVGNLLDNAYNATLRQPLGSKQIECLINSDGHELIVEIADQGCGIDEALRDRIFERGVTSSASGDHGIGLWLVRSYVDQAGGSIVVENNIPFGTIFTLYIPLTRDEHHG
>NZ_CP023963.1|WP_032713323.1|883939_884644_-|response-regulator
MDSITTLIVEDEPMLAEILVDTIKQFPQFNVIGIADKLESAKKMLRLYQPQLILLDNFLPDGKGLDLIRHAVSTNYKGRIIFITADNHMDTISEALRLGVFDYLIKPVHYQRLQHTLERFARYRSSLRSSEQASQTHVDALFNIQAREQTEPAGAPLRGIDESTFHRVLQLFSAPEVVHTADSLARILGSSKTTARRYLEQGVKNDFLEAEISYGKVGRPERIYRGKHPYPEHA
>NZ_CP023963.1|WP_045358820.1|883304_883934_+|alanyl-tRNA-synthetase
MTERVYYASDATEGRALIIGCRAEADGRYAIELDRTLFHPQGGGQPSDSGWIDEQVVMTVATRGDSVLHIVEQPLPLGEVKIRIDASARQLHARLHSAGHLLGLAGEQFGWRPVKAHHWPGEGRITFAAGAGAVLPEASALLAQVSAWQQQDLPRRITFANGLRAVGFGELPAYPCGGTHVASLAALGNIVISQLKMKKGQMIVSYNLE
>NZ_CP023963.1|WP_047058061.1|882279_883212_-|LysR-family-transcriptional-regulator
MNLNLLPDLALFVQIVEQGSFSAVARQNGLTPSAVSRSVSRLEQEMSCKLLHRTTRKLRLSDAGKAVYEPALEMLEAARQAMDSAGSTQTVAQGKLTLSVPKAVGRFVIHPLMMSFFNQYPQVDVCLRLEDRDLDFIDDGIDLALRITHSPSPGLHGKPLMPIAHLICATKEYLQRHGTPHTPQDLRAHSCISLGETPADARWKFRREGKSETVQTHGRYAANHTAVRLDAVKQHLGIGSLPLFTAREALAKGEIVQVLPEWEFISSYSGNLWLLWAGHKHMPARMRVMIDYLSEKVPALNAGNTLSAAN
>NZ_CP023963.1|WP_086557091.1|879924_882210_+|hydratase
MIKLHDRGVYLSHQYGIIPEEECANPVAKDIARKGTIAWSILSAHNISGDEQKLKIKFDSMASHDITFVGIIQTAKASGMTRFPLPYVLTNCHNSLCAVGGTINSDDHIFGLTSAQKYGGIYVPPHISVIHQYMREMMAGGGQMILGSDSHTRYGALGTMAVGEGGGELVKQLLGSTWDIDYPDVVAVYLTGKPAAGVGPQDIALAMIGAVFKSGYVKNKVMEFVGPGVASMSTDYRNSIDVMTTETTCLSSIWQTDEETKNFLRLHGREKDYRALSAKEMAYYDGCIEIDLSTIKPMIALPFHPANVYEIDTLNQNLPDILREVEIESEKISLGRAKLSLLDKIENGKLRVQQGIIAGCAGGNYVNVAQAANALRHHSCGDNIFSLSVYPSSQPVLMALTKRGMINDLMSAGAIIRTAFCGPCFGAGDTPMHNGLSIRHTTRNFPNREGSKPGNGQMSAVALMDARSIAATAANGGLLTSAAELDCWHEAQEYEFDVSPYKNRVYQGFVKGVTQQPLIYGPNIKDWPEMNALTDNILLAVTSKIMDPVTTTDELIPSGETSSFRSNPLGLAEFTLSRRDPQYVERAKKIAAIEQQRVNGEDLCRLNPQLENIFSQIRLLPGQENITAAQTEIGSMIYAVKPGDGSAREQAASCQRVLGGLANICQEYATKRYRSNVINWGMLPLQMKEAPDFEVGDFIYIPAIKSALKGELSDITAFVVSDHRPVQQITLYMEKLTSSEQDIIKAGGLINYNKNQLINGH
>NZ_CP023963.1|WP_045388739.1|878606_879869_+|SLC13/DASS-family-transporter
MSPVAITLSLLLFSIVMFVWEKIPLAATAMIVCITLVVTGVFDVKTAFAGFINQNVILFVAMFVVGGALFETGVTDKIGGIVTRYARSEKQLIVIIMLVCGILSGFLSNTGTAAVLIPVVIGAAVKSGYAQSRLLMPLAFASALGGNLSLIGSPGNLIAQSALEQVGQRFGFFEYAKLGIPMLLCGIIYFLTIGYKLLPAQSVSTAGKSEKSRKVDCPKYKQVIAVLVLVFTVLGMIFENVIGLPIAIIGSIGALFLVITRVITEKQAYQSIDSQTIFLFGGTLALAKALETTGAGAIMARSIIDLLGQQASPFLLLSAVLIISCVLTNFMSNTATAALLIPIGLSIANSMGADPRAVLMAIVIGCSCAYATPVGTPANMMIFSAGGYRFMDYVRVGLPLIAISVIVSFILLPIFFPFYS
>NZ_CP023963.1|WP_086557090.1|877088_878522_+|anion-permease
MDKKTLCKLLVLVAIPLLISLFPAPAGLTELAWVLSGIYLAAIVGLVIKPFSEPVILLVAVAASMVVIGNLGDGTIKSSSVLSGYASGTTWLVFSAFTLSAAFVITGLGKRIAYILIGKIGSTTLGLGYVTSFLDLILSPATPSNTARAGGIVLPIINSVAVALGSEPEHTAKRVGHYLMMNVYMVTKTTSYMFFTAMAGNILALKMIEDICHIKLSWGGWALAGILPGLIMLLLTPLITYKLYPPELKKVDNKAIAKEGLESLGPMTLREKMLSCLFVMALVGWVFSTSLGVNESTVAICVMALMLILKIVTWDDVIKNKGGWNTLIWYGGIIGLSSLLSKVGFFLWLAELLKDNISFGSHSTLAFVVIVALSILVRYFFASGSAYIVAMVPVFAMLANVSGAPVMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWIVGGILALLTFILHITVGVWWWELLMYWKVI
>NZ_CP023963.1|WP_047464678.1|875988_877044_+|4-oxalomesaconate-tautomerase
MKQIPCVLMRGGTSKGAFLLADDLPEDIQKRDETLLTIMGSGHELEIDGIGGGSPQTSKVAIVSKSTSQQADIDYLFVQVIVNERRVDTTPNCGNMLCAVGGFAIEKGLVAANSPVTRVRIRNVNTNTFVDADIQTPDGQVVYEGDTHIDGVPGHAAPVGLTFLNAAGAKSGQLFPTGNRVDILDDIRVTCIDMAMPMVIIPAHSLGKTGYESAAELDQDKEFFQRLESIRKQAGAAMGFGDVSNMVIPKPVLVAPPQHGGTLSVRYFMPHNCHKSLAITGAIGLASSCIIADTVVNELTRMSGEGLIRVEHPSGSIDVSLSNANETPENIRASVIRTARKILSGMVYLPE
>NZ_CP023963.1|WP_020079641.1|874783_875722_-|LysR-family-transcriptional-regulator
MNNELSGMKAFVTVAELGSFSKAAEVLNLTQPALTRKIQKIESNLNTALFERTTRKIMLTQAGKMLLPKAKSLIASLDAAIFNISNLTSNVHDTVTLSCIPTAVFYFLPRAIVQFNQRYPHIKVRIYEQGIENCMASVRKGEVDFGINMNFITHPDIEFSPLVNEPFVLACRQDHPLASKKLVEWRELVSQRLVGVRRSSGNRQLIESCLQDKPWKLDWFYEVRHLSTSLGLVEAGLGISALPCLAMPHHANSAVVSVPLVEPVIRRTLGMIRVKNRPLSAAAERFASLLLLMWTDEASELWCNVVDSHQQL
>NZ_CP023963.1|WP_045358831.1|873865_874780_+|ribonucleoside-hydrolase-RihC
MRLPIILDTDPGIDDAAAIAAALFSPQLDLQLMTTVAGNVSVEKTTRNALQLLHFWNADVPLAQGASMPLVRPLRDAASVHGESGMEGYDFVEHNRQPLAKPAFQAIRDALMHAPEPLTLVAIGPLTNIALLITQYPECLFNIRRLVLMGGSAGRGNFTPNAEFNIAIDPEAAAKVFQSGLEIVMCGLDVTNKAMLSADYLVTLPTLNQTGKMLHALFSHYRSGSMSSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGTWTAGATVVDIEGRLGQPANAQVALDLDVAGFQRWAAEVFALAP
>NZ_CP023963.1|WP_047740269.1|886520_887822_-|oxaloacetate-decarboxylase-subunit-beta
MESLNALIQGMGLMHLQAGQAAMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGLALSALENLLAHHDPVQLAVIAAKLNCAPDVHAIKEALALALPSVQGQMETLAVDMGYSSGVLAIFYKVAIGSGIAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTLNYFGFIHFTLPQAAAIGIIGGADGPTAIYLSSKLAPELLGAIAVAAYSYMALVPLIQPPIMKALTSDKERKIRMVQLRTVSKREKILFPAVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVDRLSDTVQNALINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFCVGTAAGVIMAKLMNMFSKHKINPLIGSAGVSAVPMAARVSNKVGLEADGQNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM
>NZ_CP023963.1|WP_098949158.1|887837_889604_-|sodium-extruding-oxaloacetate-decarboxylase-subunit-alpha
MTVAITDVVLRDAHQSLFATRLRLDDMLPVAAALDDVGYRSLECWGGATFDACIRFLGEDPWVRLRELKKAMPKTPLQMLLRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMNDPRNMQAALQAVRRHGAHAQGTLSYTTSPAHTLQTWLDLTEQLLETGVDSIAIKDMSGILTPHAAFELVSEIKKRYDVTLHLHCHATTGMAEMALLKAIEAGVDGVDTAISSMSATYGHPATEALVATLAGTPYDTGLDIHKLESIAAYFREVRKKYHAFEGQLKGTDSRILVAQVPGGMLTNLEGQLKQQSAAHRLDEVLSEIPRVREDLGFIPLVTPTSQIVGTQAVLNVLGGERYKTIAKETAGILKGEYGHTPAPVNAALQARVLDGADAVTCRPADLLKPELAELEADVKRQAQEKGITLAENAIDDVLTVALFPQIGLKFLENRHNPAAFEPVPQVEEATSAAPAKAAASGIYTVEVGGKAFVVKVSDGGDVSQLTTATPSSAPVQAAAPTGAGTPVTAPLAGTIWKVLASEGQAVAEGEVLLILEAMKMETEIRAAQAGTVRGIAVKSGDAVAVGDTLLQLA
>NZ_CP023963.1|WP_015703617.1|889619_889868_-|oxaloacetate-decarboxylase-subunit-gamma
MTDAVLLGEGFTLMFLGMGFVLAFLLLLIFAIRGMSLAVTRLFPEPPAAPKPAPAAVAPADDFARLKPAIVAAIHHHRRLNS
>NZ_CP023963.1|WP_042893961.1|890025_891366_-|citrate/sodium-symporter-CitS
MTNMSQAPATEKKGVSDLLGFKIFGMPLPLYAFALITLLLSHFYNALPTDIVGGFAIMFIIGAIFGEIGKRLPIFNKYIGGAPVMIFLVAAYFVYAGIFTQKEIDAISNVMDKSNFLNLFIAVLITGAILSVNRRLLLKSLLGYIPTILMGIVGASIFGIAIGLVFGIPVDRIMMLYVLPIMGGGNGAGAVPLSEIYHSVTGRSREEYYSTAIAILTIANIFAIVFAAVLDIIGKKHTWMSGEGELVRKASFKVEDDEKAGQITHRETAVGLVLATTCFLLAYVVAKKILPSIGGVSIHYFAWMVLIVAALNASGLCSPEIKAGAKRLSDFFSKQLLWVLMVGVGVCYTDLQEIINAITFANVVIAAIIVIGAVIGAAIGGWMMGFFPIESAITAGLCMANRGGSGDLEVLSACNRMSLISYAQISSRLGGGIVLVIASIVFGMMI
>NZ_CP023963.1|WP_086557093.1|891621_892650_+|[citrate-(pro-3S)-lyase]-ligase
MTLILKRVQLLKDKPRRDVIDRFLRQHQLSLETDCEIAIVAEYQQRLVGCGAIAGNVLKCIAIDPSLQGEGLSLKLLTELLTLAYELGRSELFLFTKPCNAALFSGAGFWPIAQAGDRAVLMENSRERLTRYCRQLAMYRQPGRKIGAIVMNANPFTLGHRWLVEQAASQCDWLHLFVVKEDASCFSYHDRFKLIEQGIAGIDKVTLHPGSAYLISRATFPGYFLKEQGVVDDCHSQIDLQLFRERLAPALQITHRFVGTEPLCPLTRNYNQRMKSLLEAPGDAPPIEVVELARIEKNGGPVSASRVRELYRQRNWQAVAALVPPGTLSFLMQLAESEHQTA
>NZ_CP023963.1|WP_012542888.1|892680_892974_+|citrate-lyase-acyl-carrier-protein
MEMKIDALAGTLESSDVMVRIGPAAQPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVKQANVVVDDKGALECVLRARVQAAALRAAQQSQLQWSQL
>NZ_CP023963.1|WP_015368307.1|892970_893840_+|citrate-(pro-3S)-lyase-subunit-beta
MKPRRSMLFIPGANAAMLSTSFVYGADAVMFDLEDAVSLREKDTARLLVHQALQHPLYQDIETVVRINPLNTPFGLADLEAVVRAGVDMVRLPKTDSKEDIHELEAHVERIERECGREVGSTKLMAAIESALGVVNAVEIARASPRLAAIALAAFDYVMDMGTSRGDGTELFYARCAVLHAARVAGIAAYDVVWSDINNEEGFLAEANLAKNLGFNGKSLVNPRQIELLHQVYAPTRKEVDHALEVIAAAEEAETRGLGVVSLNGKMIDGPIIDHARKVVALSASGIRD
>NZ_CP023963.1|WP_045359116.1|893850_895377_+|citrate-lyase-subunit-alpha
MKETVTMLNQQYVMPEGLAPYAGVTAKSPWLASESEKRQRKICDSLETAIRRSGLQNGMTISFHHAFRGGDKVVNMVVAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVIRQIYTSGLRGKLGEEISAGLMENPVQIHSHGGRVQLIQSGELSIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYARVDAEHAKCVVLLTEEWVDYPNYPASIAQDQVDLIVQVDEVGDPEKITAGAIRLTSNPRELLIARQAAKVVEHSGYFKDGFSLQTGTGGASLAVSRFLEDKMRRNGITASFGLGGITGTMVDLHEKGLIKTLLDTQSFDGDAARSLAQNPNHVEISTNQYASPGSKGASCERLNVVMLSALEIDIDFNVNVMTGSNGVLRGASGGHSDTAAGADLTIITAPLVRGRIPCVVEKVLTRVTPGASVDVLVTDHGIAVNPARQDLIDNLRNAGIPLMTIEELQQRAELLTGKPQPIEFTDRVVAVVRYRDGSVLDVIRQVKNSD
>NZ_CP023963.1|WP_015704365.1|896515_897337_+|4-hydroxy-tetrahydrodipicolinate-reductase
MQDAQIRVAIAGAGGRMGRQLIQAALQMEGVALGAALEREGSSLVGSDAGELAGAGKSGVTVQSSLAAVNDDFDVLIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDDAGKQAISDAAQDIAIVFAANFSVGVNVLLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAGALNKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERIEITHKASSRMTFANGAVRSALWLKDKKSGLFDMKDVLDLNAL
>NZ_CP023963.1|WP_015704367.1|897792_898941_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNLDAQLALEKAQAFPGLNGMDLAKEVTTAETYAWTQGSWTLAGDLPEAKAESDLPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKLNPDGIFLSNGPGDPAPCDYAIAAIEKFLTTDIPVFGICLGHQLLALASGAKTIKMKFGHHGGNHPVKDIDNNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRQSAK

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Crispr_ID: NZ_CP023963_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023963_2

1825428-1825558

Orphan

Consensus_repeat	Method
GCAGGGTTATCAACCTGCGCAGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023963_2

>merge|NZ_CP023963|2|1825428-1825558|CRISPRCasFinder
GCAGCCCCAGCAACCGGCTCAGCATTATCAACAACCGGCAGCTGCGCCACAGCAGGGTTATCAACCTGCGCAGCCGCCCGTACACCATCAGCCGGTAGCGCCGCAGCCGCAGGCTTATCAACCTGCGCAGC

>NZ_CP023963|2|2|1825428-1825558|CRISPRCasFinder
GCAGCCCCAGCAACCGGCTCAGC	ATTATCAACAACCGGCAGCTGCGCCACA
GCAGGGTTATCAACCTGCGCAGC	CGCCCGTACACCATCAGCCGGTAGCGCCGCAGCC
GCAGGCTTATCAACCTGCGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023963.1\|WP_015367482.1\|1833279_1833897_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP023963.1\|WP_015704878.1\|1829343_1830636_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP023963.1\|WP_015367483.1\|1830830_1833269_+\|dimethylsulfoxide-reductase-subunit-A	unknown	unknown	gnl\|CDD\|184952
NZ_CP023963.1\|WP_015367477.1\|1839561_1840419_-\|formate-transporter-FocA	unknown	unknown	gnl\|CDD\|182746
NZ_CP023963.1\|WP_001040187.1\|1816026_1816245_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP023963.1\|WP_015367478.1\|1837227_1839510_-\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_CP023963.1\|WP_015367494.1\|1812740_1813058_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP023963.1\|WP_015367486.1\|1827287_1827899_+\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP023963.1\|WP_015367492.1\|1816604_1817309_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP023963.1\|WP_046883511.1\|1819073_1820840_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP023963.1\|WP_000228469.1\|1822455_1822950_+\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP023963.1\|WP_032714159.1\|1815466_1815943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023963.1\|WP_032707682.1\|1817351_1819073_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP023963.1\|WP_015367479.1\|1836295_1837036_-\|pyruvate-formate-lyase-1-activating-protein	unknown	unknown	gnl\|CDD\|182994
NZ_CP023963.1\|WP_015367495.1\|1812194_1812416_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP023963.1\|WP_015367480.1\|1835035_1836184_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|179614
NZ_CP023963.1\|WP_015367485.1\|1827907_1829251_+\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP023963.1\|WP_045362336.1\|1833898_1834762_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|113736
NZ_CP023963.1\|WP_015367489.1\|1820954_1821923_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP023963.1\|WP_015367493.1\|1813088_1815368_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828

Protein	Function_ID	Function_description	E-value
NZ_CP023963.1\|WP_015367482.1\|1833279_1833897_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	1.28573e-91
NZ_CP023963.1\|WP_015704878.1\|1829343_1830636_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP023963.1\|WP_015367483.1\|1830830_1833269_+\|dimethylsulfoxide-reductase-subunit-A	gnl\|CDD\|184952	PRK14990, PRK14990, anaerobic dimethyl sulfoxide reductase subunit A; Provisional.	0
NZ_CP023963.1\|WP_015367477.1\|1839561_1840419_-\|formate-transporter-FocA	gnl\|CDD\|182746	PRK10805, PRK10805, formate transporter; Provisional.	0
NZ_CP023963.1\|WP_001040187.1\|1816026_1816245_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP023963.1\|WP_015367478.1\|1837227_1839510_-\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP023963.1\|WP_015367494.1\|1812740_1813058_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	3.47571e-47
NZ_CP023963.1\|WP_015367486.1\|1827287_1827899_+\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.56232e-117
NZ_CP023963.1\|WP_015367492.1\|1816604_1817309_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.25453e-138
NZ_CP023963.1\|WP_046883511.1\|1819073_1820840_-\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP023963.1\|WP_000228469.1\|1822455_1822950_+\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	1.61477e-117
NZ_CP023963.1\|WP_032707682.1\|1817351_1819073_-\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP023963.1\|WP_015367479.1\|1836295_1837036_-\|pyruvate-formate-lyase-1-activating-protein	gnl\|CDD\|182994	PRK11145, pflA, pyruvate formate lyase 1-activating protein.	0
NZ_CP023963.1\|WP_015367495.1\|1812194_1812416_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	7.509e-48
NZ_CP023963.1\|WP_015367480.1\|1835035_1836184_+\|MFS-transporter	gnl\|CDD\|179614	PRK03633, PRK03633, putative MFS family transporter protein; Provisional.	0
NZ_CP023963.1\|WP_015367485.1\|1827907_1829251_+\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP023963.1\|WP_045362336.1\|1833898_1834762_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|113736	pfam04976, DmsC, DMSO reductase anchor subunit (DmsC). The terminal electron transfer enzyme Me2SO reductase of Escherichia coli is a heterotrimeric enzyme composed of a membrane extrinsic catalytic dimer (DmsAB) and a membrane intrinsic polytopic anchor subunit (DmsC).	6.92606e-105
NZ_CP023963.1\|WP_015367489.1\|1820954_1821923_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP023963.1\|WP_015367493.1\|1813088_1815368_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0

>NZ_CP023963.1|WP_000228469.1|1822455_1822950_+|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP023963.1|WP_015367489.1|1820954_1821923_-|thioredoxin-disulfide-reductase
MGTAKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHISSVDLQNRPFRLVGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIAAEVHLIHRRDTFRAEKILIKRLMDKVESGNIVLHTDRTLEEVTGDQMGVSGLRLRDTKNSDNVETLDVAGLFVAIGHSPNTAIFEGQLALENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADACK
>NZ_CP023963.1|WP_046883511.1|1819073_1820840_-|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKTRQQELTRWLKEKSIISRRWLMISRLLGVVSGLLIVAQAWFLARILHRMIMENIPATALLLPFTLLALVLILRAWVVWLRERVGFHAGQHIRYEIRRQVLDRLQQAGPAWIQGKPAGSWATLILEQIDDMHDYYARYLPQMTLAACVPLLIVITIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALGRLSGHFLDRLRGMETLRLFNRGEAEINNIRDASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELDFGHYGVGVTLMSGFLTLILAPEFFQPLRDLGTFYHAKAQAIGAADSLKTFMETPLAQAERGEKTLSDHELIRLEARDLMVKSPDGKTLAGPLSFTLNAGERVVLVGQSGSGKSSLLNTLTGFLPYEGSLQVNGVELRDLDAERWRRLISWVGQNPQLPAATLRENVLLAWPEATEAQLQLALDKAWVSEFISQLPQGINTPLGDQAGGLSVGQAQRIAVARALLVPCRLLLLDEPAASLDAHSEQRVMQALSNASTQQTTLMVTHQLAGLAEWDAIWVMQDGQIVEQGGYAQLSAAGGAFASLLAHRQEEI
>NZ_CP023963.1|WP_032707682.1|1817351_1819073_-|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWLLTLGVVLAIVTLLASIGLLTLSGWFLSASAVVGVAGIYSFNYMLPAAGVRGAAIIRTAGRYFERLVSHDATFRVLQHLRVATFSKLLPLSPAGLARFRQGELLNRIVADVDTLDHLYLRVISPLVGALVVILVVTIGLSVLDVTLALTLGGIMLATLLLLPPLFYRAGKPTGEQITQLRGQYRQQLTSWLQGQAELMLFNASDRYRKQMEKTEQRWQEAQRRQAELTALSQALMLLIGGIAVIAMLWMASEGVGGNSQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASARRITQITEQQPEVTFSQQAPQSFSQVALTLNEVTFSYPQQSAPALKDISLQVAAGEHIAILGRTGCGKSTLLQLLTRAWDPANGQIQLNGQPLSELSETTLRQAMSVVPQRVHLFSATLRDNLLLAAPQVSDARLADILARVGLEKLLEDSGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESQILDLLSEVMRDKTVLMVTHRLRGLARFNQIIVMDNGQIIEQGSHAELLAKQGRYYQFKQRL
>NZ_CP023963.1|WP_015367492.1|1816604_1817309_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRDSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPEQFHYSRSMKRFHQRSPYRVTLNHAFGQVIEGCASHRDEGTWITHGIVQAYHQLHELGHAHSIEVWDEDRLVGGMYGVAQGALFCGESMFSRAENASKTALMIFCQAFAQGGGRLIDCQVLNAHTASLGAIEIPRRDYLDYLSVLRTYRLPERFWVPRVLFTGNG
>NZ_CP023963.1|WP_001040187.1|1816026_1816245_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP023963.1|WP_032714159.1|1815466_1815943_+|hypothetical-protein
MKPGKLLLCASLALFSITAQAQCPDMTGSYRFTGAEHPFYLVKIPGQSRYNAFFPNEAGQFTRVQTVDISAEEMKTQQIPECALIIQRVGMMMKTNKGEKVDVMTQSQNYTTEKTITTEYGLMIYAGFASDFIGIDKISAQVPKEAQNDTLPLITEAQ
>NZ_CP023963.1|WP_015367493.1|1813088_1815368_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPATEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPSQPSENNASQPGNEEQAGGEDRMENFTTNLNQLARVGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDVTEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSRSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLAKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIQQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTTVIHQVVDKFIVELQVQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVELDKANNVLTYGFHSAQKHKPEAAH
>NZ_CP023963.1|WP_015367494.1|1812740_1813058_+|ATP-dependent-Clp-protease-adapter-ClpS
MSKRDWLDFDQLVEDEVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYEGKAICGVFTAEVAETKVAMVNQYAKENEHPLLCTLEKA
>NZ_CP023963.1|WP_015367495.1|1812194_1812416_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPVEAETAA
>NZ_CP023963.1|WP_015367486.1|1827287_1827899_+|outer-membrane-lipoprotein-chaperone-LolA
MKKLAITCALLSGFVVSQVWADAAGDLKSRLDKVSSFHASFTQKVTDASGNAVQDGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKNATSNTPFMLIARNQSADWQQYNIKQNGDDFVLTPKSGNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDASKFTFTPPQGVTVDDQRK
>NZ_CP023963.1|WP_015367485.1|1827907_1829251_+|replication-associated-recombination-protein-RarA
MSNFSLDFSDNAFQPLAARMRPENLAQYIGQQHLLAPGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTTDDIEQVLNQAMSDKARGYGGQDIILPDETRKAIAELVNGDARRALNTLEMMADMAENDDSGKRVLKAELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARDRPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEQYFPQEMAQTRYYQPTNRGLEGKIAEKLAWLAELDQNSQIKRYR
>NZ_CP023963.1|WP_015704878.1|1829343_1830636_+|serine--tRNA-ligase
MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEQLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDENDNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQDTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEIPEVLRPYMRGLEYIG
>NZ_CP023963.1|WP_015367483.1|1830830_1833269_+|dimethylsulfoxide-reductase-subunit-A
MKIKAPDALLAAEVSRRGLMKTTAIGGLAMASNALTLPFTRIAHAADTLAPVSEKVVWSACTVNCGSRCPLRMHVVDGAIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKYPMKRVGKRGEGKFEQISWEEAFDTIASNMQRLIKDYGNESIYLNYGTGTLGGTLTRSWPPGKTLIARLMNCCGGYLNHYGDYSSAQIAAGLNYTYGGWADGNSPSDIENSQLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALISALAWVMITENLVDQPFLDKYCVGYDEKTLPADAPANGHYKAYILGQGSDGIAKTPEWASTITGIPRERIVKLAREIATAKPAYISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFERMPTLENPVETSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCEMIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFADQAIKPRFECKTIYEMTTELAKRMGVAEKFTEGRTQEGWMRYLYEQSRKAIPELPDFDTFRQQGIFKQRDPQGHHVAYKAFRDDPQANPLTTPSGKIEIYSQELAKIAATWELPEGDVIDPLPIYTPGFENYNDPLTAKYPLQLTGFHYKSRVHSTYGNVDVLQAACRQEMWINPIDAKTRGIVNGDRIRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYNPDASRVDQAGSINVLTTQRPSPLAKGNPSHTNLVQVEKL
>NZ_CP023963.1|WP_015367482.1|1833279_1833897_+|dimethylsulfoxide-reductase-subunit-B
MTTQYGFFIDSARCTGCKTCELACKDYKNLTPDVSFRRIYEYAGGDWQEDNGVWNQNVFAYYLSIACNHCEDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNAAKGHMTKCDGCHERVAQGKKPICVESCPLRALDFGPIAELREKHGQLAAVAPLPSAHFTRPSIVIKPNANSRPCGDTTGYLANPKEV
>NZ_CP023963.1|WP_045362336.1|1833898_1834762_+|dimethyl-sulfoxide-reductase-anchor-subunit
MGNGWHEWPLMIFTVFGQCVAGGFIVLALALMKGELSREQQRQVIMSMFGLWVLMGIGFIASTMHLGSPMRAFNSLNRVGASSLSNEIASGALFFAVGGIGWLLAVVNKLPSGLRNLWLVVTMILGVIFVWMMIRVYNTIDTVPTWYTIWTPLNFFLTLFIGGPLLGYLLLRVAGVDGWAMRLLPVIMLVALVISVTVALIQGSELATIHSSIQQASALVPNYGSLMAWRTVALVLALVCWIVPQLKGYQPALPLLGLAFVLVLVGEMIGRGVFYGLHMTVGMAIAS
>NZ_CP023963.1|WP_015367480.1|1835035_1836184_+|MFS-transporter
MTIYTRPVQMLLCGLLLLTLAIAVLNTLVPLWLAHENMPTWQVGMVGSSYFTGNLVGTLFAGWVIKRLGFNRSYYLASLIFAVGCVGLGITLGFWTWLSWRFIAGVGCAMIWVVVESALVCSGTSRSRGRLLAAYMMVYYIGTVLGQLMVSKLPTDLMSVLPWVTGLALAAILPLMFTRIMSQADEPHETVRIWPMLKLRQARHGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFWMAVMVSAGILGQWPVGRLADRYGRLLVLRVQVFVVILGCLAMLSQAAMAPALFVLGASGFTLYPVAMAWACEKVEHHQLVAMNQALLMSYTIGSLLGPTLTAMLMQNFSDNLLFIMIASVSFIYLLTLLRKAGHHPTPVAHA
>NZ_CP023963.1|WP_015367479.1|1836295_1837036_-|pyruvate-formate-lyase-1-activating-protein
MSTIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEITVEELMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAQYLSKKGINVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVHPPKKETMERVKGILEQYGHKVMY
>NZ_CP023963.1|WP_015367478.1|1837227_1839510_-|formate-C-acetyltransferase
MSELNEKLATAWEGFAKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATDATTKLWDSVMEGVKQENRTHAPVDFDTSLASTITSHDAGYIEKALEKIVGLQTEAPLKRAIIPFGGIKMVEGSCKAYNRELDPMLKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDFLMKDKFAQFNSLQAKLESGEDLEATIRLREEIAEQHRALGQIKEMAAKYGYDISGPATTAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSSFLDIYIERDLQAGKITEQDAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGVDGRTLVTKNSFRFLNTLYTMGPSPEPNITILWSEKLPLSFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNFDEVMERMDHFMDWLAKQYVTALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAVDFEIEGEYPQFGNNDARVDDMAVDLVERFMKKIQKLHTYRNAIPTQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQTM
>NZ_CP023963.1|WP_015367477.1|1839561_1840419_-|formate-transporter-FocA
MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTAAMPFGIAKLIGGVCFSLGLILCVICGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYVGNLIGALLFVLLMWLSGEYMTANGGWGLNVLQTADHKMHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAMIMVLPVAMFVASGFEHSIANMFMIPMGIVIRNFASPEFWTAIGSTPESFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRGDDHH

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Crispr_ID: NZ_CP023963_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023963_3

3924205-3924294

Orphan

Consensus_repeat	Method
AGGGAGAGGGAGAAAGAGAGTTCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023963_3

>merge|NZ_CP023963|3|3924205-3924294|CRISPRCasFinder
AGGGAGAGGGAGAAAGAGAGTTCACACGCAGAATCCATAACCGCACCGTACGTCCCCTCTCCCTGAGGGAGAGGGAGAAAGAGAGTCCAC

>NZ_CP023963|3|3|3924205-3924294|CRISPRCasFinder
AGGGAGAGGGAGAAAGAGAGTTCAC	ACGCAGAATCCATAACCGCACCGTACGTCCCCTCTCCCTG
AGGGAGAGGGAGAAAGAGAGTCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023963.1\|WP_032715070.1\|3927048_3927921_+\|N-acetylmuramoyl-L-alanine-amidase-AmiA	unknown	unknown	gnl\|CDD\|182376
NZ_CP023963.1\|WP_015365485.1\|3925975_3926425_-\|DUF2919-domain-containing-protein	unknown	unknown	gnl\|CDD\|378569
NZ_CP023963.1\|WP_015365489.1\|3921792_3922626_-\|sulfate/thiosulfate-ABC-transporter-permease-CysT	unknown	unknown	gnl\|CDD\|182873
NZ_CP023963.1\|WP_015365491.1\|3919833_3920928_-\|sulfate/thiosulfate-ABC-transporter-ATP-binding-protein-CysA	unknown	unknown	gnl\|CDD\|182778
NZ_CP023963.1\|WP_015365484.1\|3926411_3926837_-\|GNAT-family-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
NZ_CP023963.1\|WP_086557512.1\|3916753_3918049_+\|transcriptional-regulator-PtsJ	unknown	unknown	gnl\|CDD\|185378
NZ_CP023963.1\|WP_015365497.1\|3915025_3915535_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
NZ_CP023963.1\|WP_015703139.1\|3928878_3931158_-\|NADP-dependent-oxaloacetate-decarboxylating-malate-dehydrogenase	unknown	unknown	gnl\|CDD\|235976
NZ_CP023963.1\|WP_015365477.1\|3934410_3935457_-\|DUF1176-domain-containing-protein	unknown	unknown	gnl\|CDD\|369032
NZ_CP023963.1\|WP_032712125.1\|3915577_3915805_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023963.1\|WP_015703140.1\|3931451_3932420_+\|transaldolase	unknown	unknown	gnl\|CDD\|183458
NZ_CP023963.1\|WP_032715067.1\|3924344_3925244_-\|Dyp-type-peroxidase	unknown	unknown	gnl\|CDD\|367887
NZ_CP023963.1\|WP_015365492.1\|3918823_3919735_-\|cysteine-synthase-CysM	unknown	unknown	gnl\|CDD\|236972
NZ_CP023963.1\|WP_086557513.1\|3918063_3918780_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|181323
NZ_CP023963.1\|WP_015365490.1\|3920917_3921793_-\|sulfate/thiosulfate-ABC-transporter-permease-CysW	unknown	unknown	gnl\|CDD\|183225
NZ_CP023963.1\|WP_020078203.1\|3915807_3916671_-\|pyridoxine/pyridoxal/pyridoxamine-kinase	unknown	unknown	gnl\|CDD\|181269
NZ_CP023963.1\|WP_015703138.1\|3927920_3928820_+\|oxygen-dependent-coproporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|235413
NZ_CP023963.1\|WP_086557516.1\|3932426_3934421_+\|transketolase	unknown	unknown	gnl\|CDD\|183723
NZ_CP023963.1\|WP_015703137.1\|3925338_3925914_-\|RpoE-regulated-lipoprotein	unknown	unknown	gnl\|CDD\|236742
NZ_CP023963.1\|WP_086557514.1\|3922625_3923642_-\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236775

Protein	Function_ID	Function_description	E-value
NZ_CP023963.1\|WP_032715070.1\|3927048_3927921_+\|N-acetylmuramoyl-L-alanine-amidase-AmiA	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	0
NZ_CP023963.1\|WP_015365485.1\|3925975_3926425_-\|DUF2919-domain-containing-protein	gnl\|CDD\|378569	pfam11143, DUF2919, Protein of unknown function (DUF2919). This bacterial family of proteins has no known function. Some members are annotated as YfeZ however this cannot be confirmed.	9.49409e-43
NZ_CP023963.1\|WP_015365489.1\|3921792_3922626_-\|sulfate/thiosulfate-ABC-transporter-permease-CysT	gnl\|CDD\|182873	PRK10971, PRK10971, sulfate/thiosulfate ABC transporter permease CysT.	0
NZ_CP023963.1\|WP_015365491.1\|3919833_3920928_-\|sulfate/thiosulfate-ABC-transporter-ATP-binding-protein-CysA	gnl\|CDD\|182778	PRK10851, PRK10851, sulfate/thiosulfate ABC transporter ATP-binding protein CysA.	0
NZ_CP023963.1\|WP_015365484.1\|3926411_3926837_-\|GNAT-family-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	3.86745e-95
NZ_CP023963.1\|WP_086557512.1\|3916753_3918049_+\|transcriptional-regulator-PtsJ	gnl\|CDD\|185378	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional.	0
NZ_CP023963.1\|WP_015365497.1\|3915025_3915535_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	7.55394e-107
NZ_CP023963.1\|WP_015703139.1\|3928878_3931158_-\|NADP-dependent-oxaloacetate-decarboxylating-malate-dehydrogenase	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP023963.1\|WP_015365477.1\|3934410_3935457_-\|DUF1176-domain-containing-protein	gnl\|CDD\|369032	pfam06674, DUF1176, Protein of unknown function (DUF1176). This family consists of several hypothetical bacterial proteins of around 340 residues in length. Members of this family contain six highly conserved cysteine residues. The function of this family is unknown.	4.68235e-110
NZ_CP023963.1\|WP_015703140.1\|3931451_3932420_+\|transaldolase	gnl\|CDD\|183458	PRK12346, PRK12346, transaldolase A; Provisional.	0
NZ_CP023963.1\|WP_032715067.1\|3924344_3925244_-\|Dyp-type-peroxidase	gnl\|CDD\|367887	pfam04261, Dyp_perox, Dyp-type peroxidase family. This family of dye-decolourising peroxidases lack a typical heme-binding region.	4.64871e-134
NZ_CP023963.1\|WP_015365492.1\|3918823_3919735_-\|cysteine-synthase-CysM	gnl\|CDD\|236972	PRK11761, cysM, cysteine synthase CysM.	0
NZ_CP023963.1\|WP_086557513.1\|3918063_3918780_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|181323	PRK08250, PRK08250, glutamine amidotransferase; Provisional.	7.10523e-161
NZ_CP023963.1\|WP_015365490.1\|3920917_3921793_-\|sulfate/thiosulfate-ABC-transporter-permease-CysW	gnl\|CDD\|183225	PRK11602, cysW, sulfate/thiosulfate ABC transporter permease CysW.	0
NZ_CP023963.1\|WP_020078203.1\|3915807_3916671_-\|pyridoxine/pyridoxal/pyridoxamine-kinase	gnl\|CDD\|181269	PRK08176, pdxK, pyridoxine/pyridoxal/pyridoxamine kinase.	8.70202e-172
NZ_CP023963.1\|WP_015703138.1\|3927920_3928820_+\|oxygen-dependent-coproporphyrinogen-oxidase	gnl\|CDD\|235413	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase.	0
NZ_CP023963.1\|WP_086557516.1\|3932426_3934421_+\|transketolase	gnl\|CDD\|183723	PRK12753, PRK12753, transketolase; Reviewed.	0
NZ_CP023963.1\|WP_015703137.1\|3925338_3925914_-\|RpoE-regulated-lipoprotein	gnl\|CDD\|236742	PRK10718, PRK10718, RpoE-regulated lipoprotein; Provisional.	5.35128e-129
NZ_CP023963.1\|WP_086557514.1\|3922625_3923642_-\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236775	PRK10852, PRK10852, thiosulfate ABC transporter substrate-binding protein CysP.	0

>NZ_CP023963.1|WP_086557514.1|3922625_3923642_-|sulfate-ABC-transporter-substrate-binding-protein
MAVKSLKKGYLALAASMLLVAQAQATELLNSSYDVSRELFAALNPPFEQQWAKENGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGNLIPADWQSRLPNNSSPFYSTMAFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTSFVERGLGDVLITFESEVNNIRKQYEAQGFEVVVPKVNILAEFPVAWVDKNVKANGTEKAAKAYLNYLYSPQAQTIITDYYYRVNDPKVMASLKDKFPQTELFRVEDQFGSWPEVMKTHFVSGGELDKLLAAGRQ
>NZ_CP023963.1|WP_015365489.1|3921792_3922626_-|sulfate/thiosulfate-ABC-transporter-permease-CysT
MLAVSSKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGLYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRLQSFRKVVLPELSPALLAGIALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH
>NZ_CP023963.1|WP_015365490.1|3920917_3921793_-|sulfate/thiosulfate-ABC-transporter-permease-CysW
MAEVTQLKRYDAPRINWGKWFLIGVGMLVSAFILVVPMIYIFVQAFSKGLMPVLENLANPDMLHAIWLTVMIALITVPVNLVFGTLLAWLVTRFTFPGRQLLLTMLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFAWPGMVLATIFVTCPFVVRELVPVMMSQGSNEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLQQDYNTVGSFTAAALLTLMAILTLFLKSMLQWRLANQEKRAQQEGNHEH
>NZ_CP023963.1|WP_015365491.1|3919833_3920928_-|sulfate/thiosulfate-ABC-transporter-ATP-binding-protein-CysA
MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQSSGHIRFHGTDVSRMHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQADAPERVWREPSTRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYDEPLSVVLAGDEAPSRGERLFVGLQNARLYNGTERIEPRGELALAESA
>NZ_CP023963.1|WP_015365492.1|3918823_3919735_-|cysteine-synthase-CysM
MNTLEQTIGNTPLVKLQRLGPDNGSEIWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYQMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLAAAMAERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTDGRITHFVSSMGTTGTITGVSRFLREQAKPVSIIGLQPEEGSSIPGIRRWPQEYMPGIFNASLVDEVLDIHQQDAENTMRQLAVQEGIFCGVSSGGAVAGALRIARANPGAVVVAIICDRGDRYLSTGVFGEEHFSQGAGI
>NZ_CP023963.1|WP_086557513.1|3918063_3918780_+|type-1-glutamine-amidotransferase
MRIHFIVHEVFEAPGAYLRWVNARGYQASWSRVYAGDPLPANAEGFDMLVVLGGPQSPRTTLAECPWFDAHAEKNLIAQAIAAGRIVVGICLGSQLIGEALGAPVMQSPEKEIGHYPIILTTAGLQDDNIAHFGQSVVVGHWHNDMPGLTPAAEVLASSEGCPRQIVKYSDWVYGFQCHMEFDVEVIELLITHSQHELAAAKGRRFIRSEDEMRQWDYREMNQKLWAFLDKLVAKHAL
>NZ_CP023963.1|WP_086557512.1|3916753_3918049_+|transcriptional-regulator-PtsJ
MFTGKTASEIFDNIRHLVQSGALQPGEALPPVRELAGELAVNRNTVAAAYKRLVTSGLAVSQGRNGTAIKARNTLNAVEGGDPTTSLIDISGGNPDPRCLPDIGRFLPQLPQTPHLYGDAAVEPRLADWAREWVSRDIGQEFDINLTSGAIDALERLLCALLLPGDSVAVEDPCFLSSINMLRYAGFQPSPVAVDGEGMDPERLEEALRNGARAVILTPRAHNPTGCSLTPERAQAIRTVLARYPQTLAIVDDHFALLSATCWHNPLPDGIQRWALVRSMSKTLGPDLRLAIVASDPTTSAALRLRLNAGSQWVSHLLQELAFACLNDSAFAASLTASQHHYQQQNQRLAAALARHGAGDYPPGDGLNFWLPLSAASQPLALRLARAGWLVREGEAFGVKTPAHGLRLSLGALTEAQIEQLAHDLSLVLPC
>NZ_CP023963.1|WP_020078203.1|3915807_3916671_-|pyridoxine/pyridoxal/pyridoxamine-kinase
MSQQDEIQSVLFNDHSRALEVDIVAVQSQVVYGSVGNSIAVPAIKQHELRVMAVPTVLFSNTPHYDTFYGGVIPEEWFSGYLRALEERDALRELRAVTTGYMGSAGQIALLAQWLQRIRVHHPDLCILVDPVIGDVDSGIYVKAEIPEAYRRHLLPLARGITPNLFELETLSGMPCHNQQEAVVAARSLLSDTLKWVVITSAPGPDASTINVLVVTDDAVEVVVHPRVETDLKGTGDLFCAELISNLVRDMPLGDATRAAAQRVLAVMTWTESQGCDELILPPSGAQ
>NZ_CP023963.1|WP_032712125.1|3915577_3915805_-|hypothetical-protein
MHSYRLVVRREGRTVGHFETTGMNALEDACRARSLFESDPGYQCELWVADSERRILESSPQGMKILASEKCYRPA
>NZ_CP023963.1|WP_015365497.1|3915025_3915535_+|PTS-glucose-transporter-subunit-IIA
MGLFDKLKSLVSDDKKDTGTIEIVAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVEGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDPVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK
>NZ_CP023963.1|WP_032715067.1|3924344_3925244_-|Dyp-type-peroxidase
MSQVQSGILPEHCRAAIWIEANVKGDVNALREASKIFVDNVATFQAKFPDAKLGAVVAFGNTVWRQLSGGEGAEELKDFPVYGKGLAPSTQYDVLIHILSARHEVNFSVAQAAVAAFGDAIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVPDQEMMIGRTKEANEEIDGDERPITSHLSRVDLKEDGKGLKIVRQSLPYGTASGTNGLYFCAYCARLYNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLERIQAL
>NZ_CP023963.1|WP_015703137.1|3925338_3925914_-|RpoE-regulated-lipoprotein
MKSLRLMLCALPLALTGCSTMSAVNWSAAYPWNWFGSSNEVTEQGVGKLTASTPLNEQAISDALGGSYRLRSGMKTADGKIVHYFEALKDDKLALTINGDGGTVSRIDVRDSAIPAASGVKIGTPFSELYGKAFGNCEKGVPDNGAVVECKAPGSQHISYAFTGHWSGPDELMPSDDTLKNWKVSKIIWRR
>NZ_CP023963.1|WP_015365485.1|3925975_3926425_-|DUF2919-domain-containing-protein
MKNTEFIPADYDTQGRLRLPLLFWGVLLLQARTWVLFVMAGASRQQGDALLSLFYPDHDNFWLGLLPGVPAVAAFLLSGQRQRFPRLWPLMRWLLIASQALLLAWQPWLWFTGEAPSMLTIALLAADIYALWWLITSRRLHACFRLEAL
>NZ_CP023963.1|WP_015365484.1|3926411_3926837_-|GNAT-family-acetyltransferase
MEIRVFRQQDFEEVITLWERCDLLRPWNDPEMDIERKLNHDVSLFLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEYRGRGIANALLNRLEKKLIARGCPKISIMVRDDNDVVQGMYERLGYEHSDVLTLGKRLIEDEEY
>NZ_CP023963.1|WP_032715070.1|3927048_3927921_+|N-acetylmuramoyl-L-alanine-amidase-AmiA
MSTFKPLKILASRRQVLKAGLAAMTLTGVASQATAKEQPLKTSNGHSKPVTKKAGSRRLVMLDPGHGGIDTGAIGHNGSKEKHVVLAIAKNVRSILRSNGIDARLTRSGDTFIPLYDRVEIAHQHGADLFMSIHADGFTNPSAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSIPSVLVETSFITNPNEEKLLGTTAFRQKIANAIASGIISYFHWFDNQKAHSKRR
>NZ_CP023963.1|WP_015703138.1|3927920_3928820_+|oxygen-dependent-coproporphyrinogen-oxidase
MKPDVQQVKAFLLQLQDAICAKLSAVDGKDFVEDSWQREGGGGGRSRVLRDGGVFEQAGVNFSHVHGDAMPASATAHRPELAGRSFEAMGVSLVVHPRNPYVPTSHANVRFFIAEKPGADPVWWFGGGFDLTPYYGFEEDAIHWHRTARDLCLPYGDEVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGFTDAYLPIVERRKTTPYGERERDFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYHPQEGSPEAALSEFIKVKEWI
>NZ_CP023963.1|WP_015703139.1|3928878_3931158_-|NADP-dependent-oxaloacetate-decarboxylating-malate-dehydrogenase
MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLAAYKYTARGNLVAVVSNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFINVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRVVEKNLSDVRMVVSGAGAAAIACMNLLVALGMQKHNIVVCDSKGVIYKDREANMAETKAAYAVEDDGKRTLDDVIDGADIFLGCSGPKVLTPEMVKKMARSPLILALANPEPEILPPLAKEVRDDVIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVHAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDAYIEKLSEFVYKTNLFMKPIFSQARKEPKRVVLAEGEETRVLHATQELVSLGLAKPILIGRPSVIEMRIQKLGLQIKAGVDFEIVNNESDPRFKEYWSEYYQLMKRRGITQEQAQRAVISNTSVIGAIMVHRGEADAMICGTIGDYHEHYRVVQPLFGFRDGVSTAGAMNALLLPSGNTFIADTYVNHDPSPEELAEITLMAAESVRRFGIEPRVALLSHSNFGSADCPSASKMRKTLELVKASAPDLMIDGEMHGDAALVESIRNDRMPDSPLKGAANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGIAKPVHILTPIASVRRIVNMVALAVVEAQTQPL
>NZ_CP023963.1|WP_015703140.1|3931451_3932420_+|transaldolase
MNQLDSIKQFTTVVADSGDIESIRHYQPEDATTNPSLLLKAAGLDNYAGLIDDALAWAAKQGGNRETQVANACDKLAVNFGAEILKSIPGRVSTEVDARLSFNREKSIEKARHLVALYQEMGIDKSRILIKLASTWEGIRAAEVLEKEGIHCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARQPLDPYVVDEDPGVKSVRNIYDYFKLHKYNTIVMGASFRRTEQILALVGCDRLTISPALLQELQASDAPVVRKLIPAHQILPRPVPMSEAEFRWEHNQDPMAVEKLAEGIRQFAVDQRKLEDLLAAKLSSFVTE
>NZ_CP023963.1|WP_086557516.1|3932426_3934421_+|transketolase
MSRRELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTNPHWYDRDRFILSNGHASMLLYSLLHLTGYDLPMNELKNFRQLHSKTPGHPEHGYTPGVETTTGPLGQGLANAVGMAIAERTLAAQFNRPGHDIVDHYTWVFMGDGCLMEGISHEASSLAGTLGLGKLIGFYDHNGISIDGHVEGWFTDDTAERFRAYHWHVIGDIDGHDPQAVKQAIQEAQAVTDKPSLIICRTIIGFGSPNKAGSEESHGAALGEKEVALAREQLGWKYPPFEIPKEIYQGWDARPRGEKAEHAWNEKFAAYQQQYPELAAELKRRMEGELPDNWQKTAHDYVAKLQSEPAKIASRKASQNALNAYGPDLPELLGGSADLAPSNLTIWSGSKSIKEDQAGNYIHYGVREFGMTAVANGIALHGGFIPYTSTFLMFVEYARNAARMAALMKAHQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVETAVAWQAAIERKDGPTALILSRQNLAQMARTPEQVQEIARGGYVLKDAGGKPDLILIATGSEVEIAVQAAETLLASGINVRVVSLPSTDVFDAQDEAWRESVLPSDVSARVAIEAGIADYWYKYVGLKGAIVGMTRYGESAPADKLFPFFGFTAEHIVEVSRKVLNG
>NZ_CP023963.1|WP_015365477.1|3934410_3935457_-|DUF1176-domain-containing-protein
MFHRVLMLLFFGFLPTSLAWAAPAQQLFGDWLVTCNNQNYCVTRNVGLHHGLVMTLSRSAGAATDAALRIELGGVGNPVAALAAIGPRLQLDGKPLHFDGKHWQIADKLIKTGDSVSIDAFLQQAQEGKEITLQNGLQSISLKGLKAALLFIDNRQKRVGSETAWVGKGEEPPLSVPPAPALRTVGKAEVAQSPLSRDELNELIDYGNERMNASPCSLDPFRREIRVTALTDEKVLLMTSCEAGAYNTVWLAWLVSRKTPHLARQVRLALPFQPPGNAPRDIELINASFDEQRHELVTFDKGRAPGDCGIQTRWRYDGQRFNLTRYAQQPQCDNWQGPDAWPTLWITR

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Crispr_ID: NZ_CP023963_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023963_4

4469647-4469761

Orphan

Consensus_repeat	Method
GTTGGGTAGCCCGGATAAGGCGTAACCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023963_4

>merge|NZ_CP023963|4|4469647-4469761|CRISPRCasFinder
GTTGGGTAGCCCGGATAAGGCGTAACCGCCATCCGGGAAGGTTTCCCCGGCTCGCGCTGCGCTCAGCCGGGCTACGGGTACGCATCGTTGGGTAGCCCGGATAAGGCGTAGCCGC

>NZ_CP023963|4|4|4469647-4469761|CRISPRCasFinder
GTTGGGTAGCCCGGATAAGGCGTAACCGC	CATCCGGGAAGGTTTCCCCGGCTCGCGCTGCGCTCAGCCGGGCTACGGGTACGCATC
GTTGGGTAGCCCGGATAAGGCGTAGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023963.1\|WP_020077975.1\|4469817_4470561_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|182051
NZ_CP023963.1\|WP_086557612.1\|4470621_4473495_-\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP023963.1\|WP_015369791.1\|4460933_4461200_-\|FAD-assembly-factor-SdhE	unknown	unknown	gnl\|CDD\|182803
NZ_CP023963.1\|WP_015369790.1\|4461423_4462407_+\|tRNA-modifying-protein-YgfZ	unknown	unknown	gnl\|CDD\|236567
NZ_CP023963.1\|WP_020077980.1\|4463691_4464420_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP023963.1\|WP_004205298.1\|4480031_4480361_+\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|182874
NZ_CP023963.1\|WP_015703429.1\|4475556_4476759_-\|FAD-dependent-2-octaprenylphenol-hydroxylase	unknown	unknown	gnl\|CDD\|236139
NZ_CP023963.1\|WP_086557610.1\|4464539_4465973_+\|6-phospho-beta-glucosidase-BglA	unknown	unknown	gnl\|CDD\|184975
NZ_CP023963.1\|WP_015369786.1\|4466097_4466457_+\|copper-resistance-protein	unknown	unknown	unknown
NZ_CP023963.1\|WP_015703425.1\|4468517_4469129_+\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239321
NZ_CP023963.1\|WP_015369789.1\|4463329_4463641_-\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|179908
NZ_CP023963.1\|WP_008806429.1\|4462505_4463165_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|185044
NZ_CP023963.1\|WP_002916480.1\|4474039_4475134_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP023963.1\|WP_045363599.1\|4466506_4468516_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|226685
NZ_CP023963.1\|WP_032709116.1\|4477944_4479261_-\|Xaa-Pro-aminopeptidase	unknown	unknown	gnl\|CDD\|182804
NZ_CP023963.1\|WP_020077973.1\|4473625_4474015_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP023963.1\|WP_020077976.1\|4469118_4469622_+\|protein-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|239309
NZ_CP023963.1\|WP_045387224.1\|4480685_4481282_+\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|182385
NZ_CP023963.1\|WP_015703430.1\|4476769_4477948_-\|2-octaprenyl-6-methoxyphenyl-hydroxylase	unknown	unknown	gnl\|CDD\|235584
NZ_CP023963.1\|WP_015703432.1\|4479286_4479865_-\|YecA-family-protein	unknown	unknown	gnl\|CDD\|234976

Protein	Function_ID	Function_description	E-value
NZ_CP023963.1\|WP_020077975.1\|4469817_4470561_-\|SDR-family-oxidoreductase	gnl\|CDD\|182051	PRK09730, PRK09730, SDR family oxidoreductase.	9.60511e-170
NZ_CP023963.1\|WP_015703432.1\|4479286_4479865_-\|YecA-family-protein	gnl\|CDD\|234976	PRK01736, PRK01736, hypothetical protein; Reviewed.	1.57873e-121
NZ_CP023963.1\|WP_015369791.1\|4460933_4461200_-\|FAD-assembly-factor-SdhE	gnl\|CDD\|182803	PRK10878, PRK10878, FAD assembly factor SdhE.	2.85923e-47
NZ_CP023963.1\|WP_015369790.1\|4461423_4462407_+\|tRNA-modifying-protein-YgfZ	gnl\|CDD\|236567	PRK09559, PRK09559, putative global regulator; Reviewed.	0
NZ_CP023963.1\|WP_020077980.1\|4463691_4464420_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	5.02848e-58
NZ_CP023963.1\|WP_015703429.1\|4475556_4476759_-\|FAD-dependent-2-octaprenylphenol-hydroxylase	gnl\|CDD\|236139	PRK08013, PRK08013, oxidoreductase; Provisional.	0
NZ_CP023963.1\|WP_086557610.1\|4464539_4465973_+\|6-phospho-beta-glucosidase-BglA	gnl\|CDD\|184975	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional.	0
NZ_CP023963.1\|WP_015703425.1\|4468517_4469129_+\|thioredoxin-domain-containing-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	2.48131e-54
NZ_CP023963.1\|WP_086557612.1\|4470621_4473495_-\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP023963.1\|WP_015369789.1\|4463329_4463641_-\|ASCH-domain-containing-protein	gnl\|CDD\|179908	PRK04980, PRK04980, hypothetical protein; Provisional.	4.15277e-63
NZ_CP023963.1\|WP_008806429.1\|4462505_4463165_-\|hemolysin-III-family-protein	gnl\|CDD\|185044	PRK15087, PRK15087, hemolysin; Provisional.	9.93513e-138
NZ_CP023963.1\|WP_002916480.1\|4474039_4475134_-\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP023963.1\|WP_045363599.1\|4466506_4468516_+\|thioredoxin-family-protein	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	1.78888e-103
NZ_CP023963.1\|WP_032709116.1\|4477944_4479261_-\|Xaa-Pro-aminopeptidase	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	0
NZ_CP023963.1\|WP_020077973.1\|4473625_4474015_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	7.0635e-73
NZ_CP023963.1\|WP_020077976.1\|4469118_4469622_+\|protein-disulfide-oxidoreductase	gnl\|CDD\|239309	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.	1.81836e-46
NZ_CP023963.1\|WP_045387224.1\|4480685_4481282_+\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|182385	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional.	1.80306e-120
NZ_CP023963.1\|WP_015703430.1\|4476769_4477948_-\|2-octaprenyl-6-methoxyphenyl-hydroxylase	gnl\|CDD\|235584	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated.	0
NZ_CP023963.1\|WP_004205298.1\|4480031_4480361_+\|cell-division-protein-ZapA	gnl\|CDD\|182874	PRK10972, PRK10972, cell division protein ZapA.	3.38717e-64

>NZ_CP023963.1|WP_020077976.1|4469118_4469622_+|protein-disulfide-oxidoreductase
MASKIRRWLRELAVWLLIGAAVSLAVDYFRQPALPQNFSATSLQTLDGRTLDLNAMSQQKPLLLYVWATWCGVCRYTTPSVASLAADGGNVLTVALRSGDNATLEKWLTRKKMALPTVNDPSGQLARQWDIQVTPTLVVISQGEVKSVTTGWTSSWGMRLRLWLASW
>NZ_CP023963.1|WP_015703425.1|4468517_4469129_+|thioredoxin-domain-containing-protein
MRAITALLLLCVSAFSFAAPAEEPQSNGNDQLAQLLFNDPNSPRTGAKEPKLTIVSFTDYNCPYCKQFDPMLEKIVHDNPDIQLIVKLLPFKGQSSVNAAKAALSTWRQQPDKFWALHQRLMAKKGYHDDASIAAAQKKTATDSVNIDDKTMDSLKMNLILSQVLNIQGTPATIIGDQMVAGAIPAEELEGLVKEQLAKARGQ
>NZ_CP023963.1|WP_045363599.1|4466506_4468516_+|thioredoxin-family-protein
MFMVFRRLLVCLLWLWLPVSQAADSGWLRVADNQHASVRLRAQSESNGDTRLLLDVALEKGWKTYWRSPGEGGIAPAIAWRTPLEVNWRWPTPQRFDVAGISTQGYHGDVSFPMTLRGKIPPTLSGVLTLSTCSNVCILTDYPFSLDMTAPAGERFNYDFTRAMGTLPLRDGLTSALSASYVSGKLTVTARRDAGWQQPALFIDSMEDVDFGKPSFTSRGDTLTATVPVTDSWGEAAPDLSGKTLSLVLADSGQAQESHIAIAAGSAAPGLALGWVLLMALAGGLILNVMPCVLPVLAMKLGSLVQTERRERGAVRRQFLASVCGIVVSFLALALMMTALRLGNQALGWGIQFQNPWFIGAMALVMVLFSASLLGLFEIRLSSSASTFLATRGGNGLMGHFWQGAFATLLATPCTAPFLGTAVSVALVAPLPLLWGIFFAMGIGMSLPWLLIVAWPGLAQRLPRPGRWMNHLRVVLGLMMLGSALWLVSLLTIHIGRTPVLTLLVILAIGLLLATAWRYRWRTALRAGTLAIVVAGAVAFVAQQDGQGPRRDRVNWQPLSEQAIANALAEHKRVFIDVTADWCVTCKANKYNVLLRDDVQQALSAPDVVALRGDWSRPSADISQFLTARGSAAVPFNQIYGPGLPQGQILPALLDREQLLATLSAAKGK
>NZ_CP023963.1|WP_015369786.1|4466097_4466457_+|copper-resistance-protein
MIKRQRKAILLVLLACLVVLICTAQRMAGMHALVMNVTAASQSAQPGPDNAEAPVSPCELSAKSLMAVPPMLFEGALLAIALLLAVLAAIPPRIERIWPPRVISPPRLRVHLRLCVFRE
>NZ_CP023963.1|WP_086557610.1|4464539_4465973_+|6-phospho-beta-glucosidase-BglA
MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITQQVEAGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPQGDETQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGGWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMQVGCMLAMVALYPYSCKPEDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDSQILREGTCAYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPHVKASDWGWQIDPVGLRYALCELYERYQKPLFIVENGFGAYDKVEADGSINDDYRIDYLRAHVEEMIKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGENL
>NZ_CP023963.1|WP_020077980.1|4463691_4464420_+|MurR/RpiR-family-transcriptional-regulator
MFSHAAVASLNNLEMMVYHYVIKNRDKVMYMTIRELAEAAGVSTTTVLRFCRKLQCEGYSEFRVRFKLYLEQNEPQQANIGASEIMSFFKSVNNDEFDQLLEQAVDIILSSERIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTNDMARNALAIVLSVSGETEEILRFASQFSLHHCKVMSITSHEHSRLAKLADFNLSWHVPQTRIGGVYDITTQIPVIYILESLGRKLARKIG
>NZ_CP023963.1|WP_015369789.1|4463329_4463641_-|ASCH-domain-containing-protein
MQANDITFFQRFQDDILAGRKTITIRDAAESHFKPGDVLRVGRYEDDGYFCTIAVTATSTVTLDTLTEQHAQQENMTLEQLRQVISEIYPAEDRFYVIEFKRL
>NZ_CP023963.1|WP_008806429.1|4462505_4463165_-|hemolysin-III-family-protein
MVRKPLITQGYSLAEEVANSISHGIGLVFGIVGLVLLLVQAVDTNASATAITSYSLYGGSMIMLFLASTLYHAIPHQRAKQWLKKFDHCAIYLLIAGTYTPFLLVGLNSPLAKGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLTMGWLSLIVVYQLAVKLAVGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQS
>NZ_CP023963.1|WP_015369790.1|4461423_4462407_+|tRNA-modifying-protein-YgfZ
MAFTPFPPRQPSSSARLPLTLMTLDDWALATITGPDGEKYLQGQITADVSHLTADQHLLAAHCDAKGKMWSNLRVFHRDGGFAWIERRSLREAQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALPDAGKPVVTEGVTSLLWFEHPAERFLLVTDADTANRVTDALRGEAQLNNSQQWLALNIEAGLPVIDSVNSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGTASRVPEAGEDLELKMGDNWRRTGTVLAAVQLDDGSLMVQVVMNNDMEPDSVFRVRDDAGSLSIKPLPYSLEED
>NZ_CP023963.1|WP_015369791.1|4460933_4461200_-|FAD-assembly-factor-SdhE
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDDDKRLFIRLLENDDPDLFNWLMNHGKPADAQLQRMINLIQTRNRERGPVAI
>NZ_CP023963.1|WP_020077975.1|4469817_4470561_-|SDR-family-oxidoreductase
MAIALISGASRGIGRATALLLAQEGYTVAVNYHHNIKAATEVVNTIVESGGKATALRADISDEAQVMAMFEAIDRMGEPLTALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKNSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSFLELAGGK
>NZ_CP023963.1|WP_086557612.1|4470621_4473495_-|aminomethyl-transferring-glycine-dehydrogenase
MTQTLSQLENRDAFIERHIGSDAQQQQEMLKTVGADSLNALIGQIVPQDIQLATPPQVGDATTEFAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVIQRNMLENPGWYTAYTPYQPEVSQGRLESLLNFQQVTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVHPQTLDVVRTRAETFGFDVIVDDADKVLDHQDVFGVLLQQVGTTGEIHDYSKLIAELKARKLIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRIAGRIHRLTDILADGLQKKGLKLRHAHYFDTLCVEVADKAAVLARAEALQINLRSDIHGAVGITLDEATTREDVLNLFRAIVGDDHGLDIDTLDKDVALDSRSIPAAMLRDDAILTHPVFNRYHSETEMMRYMHALERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVEQAEGYHQMIAQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLREKAEQAGANLSCIMVTYPSTHGVYEETIREVCEIVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQASQNAILNANYIATRLKDAYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDFGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDRVKAGEWPLEDNPLVNAPHTQGELVSEWNHPYSRELAVFPAGLHNKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ
>NZ_CP023963.1|WP_020077973.1|4473625_4474015_-|glycine-cleavage-system-protein-GcvH
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYSDGWIFKIKASDEAQVAALLDAAAYEALLEDE
>NZ_CP023963.1|WP_002916480.1|4474039_4475134_-|glycine-cleavage-system-aminomethyltransferase-GcvT
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRGDAGMFDVSHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTEKGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLGYSIALARVPAGIGDTAVVQIRNREMPVKVTKPGFVRNGKAIV
>NZ_CP023963.1|WP_015703429.1|4475556_4476759_-|FAD-dependent-2-octaprenylphenol-hydroxylase
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQAAPQPLDADAPPALRVSAINAASEKLLDKLGVWSEIIAQRASCYHGMEVWDKDSFGRISFDDQSMGFSHLGHIIENAVVHHALWQKAQRCADVTLLAPAQLQQVAWGENEAFLSLQDGSMLTARLVVGADGANSWLRNKADIPLTFWDYRHHALVATIRTTEPHQAVARQAFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQADAAAFNQALNIAFDNRLGLCQLESDRQVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLHAQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKFLRDMGLKLADSLPGVKPQLIRQAMGLNDLPAWLR
>NZ_CP023963.1|WP_015703430.1|4476769_4477948_-|2-octaprenyl-6-methoxyphenyl-hydroxylase
MSVLIVGGGMTGATLALAISRLTGGALPVHLIEAQDPASSRHPGFDDRAIALAAGTCQQLARIGIWQNLAKRATPIQRVHVSDRGHAGFVNLAAADYGLSALGQVVELHDVGQRLFSLLREAPGVTLHCPAKVEAVNRSQDSVSLTLDSGETINGKLLVAADGSRSSLGARCGISWQQQPYEQLAIIANVSTALPHEGRAFERFTEHGPLAMLPMSQGRCSLVWCHPQSRRDEVLSWSDERFCQQLQQAFGWRLGRITHAGKRSVYPLALTTAIRSVSHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAEMLADAHALGEDVGNYSLLCRYQARRADDKAATIGVTDGLVHLFANRWAPLVAGRNVGLMAMELFTPARDALAQRTLGWVPR
>NZ_CP023963.1|WP_032709116.1|4477944_4479261_-|Xaa-Pro-aminopeptidase
MTQQEFLSRRQALLAQMQPGSAALIFAAPEAVRSADSEYPYRQNSDFWYFTGFNEPEALLVLIKSDETHNHSVLFNRVRDLTAEIWFGRRLGQDAAPGKLGVDRALAFSEINQQLYQLLNGLDAIYFAQGEYAYADEIVFNALEKLRKGSRQNLQAPNSVIDWRPVVHEMRLFKSAEELEVMRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFNRHGARFPSYNTIVGGGENACILHYTENESELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFSKPQREIYDIVLESLETALELYRPGTSIYEVNQEVVRIMITGLVRLGILKGEIDELIANNAHRPYFMHGLSHWLGLDVHDVGNYDTDRSRVLEPGMVLTVEPGLYIATDADVPAQYRGIGIRIEDDIVITEDGNENLTASVVKKADEIEALMAAARQS
>NZ_CP023963.1|WP_015703432.1|4479286_4479865_-|YecA-family-protein
MSIQNEMPGYNDVDQLLNQQGVGLTPAEMHGLISGILCGGNTDSSWQPLVHDLTNEGLAFGHELAQALRSMHSATSDSLEDDGFLFQLYMPEGDNVSVFDRADALAGWVNHFLLGLGVTQPKLDKVKDETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFARQQPTAPEVRKPTLH
>NZ_CP023963.1|WP_004205298.1|4480031_4480361_+|cell-division-protein-ZapA
MSAQPVDLQIFGRSLRVNCPPEQRDALNQAAEDLNQRLQDLKERTRVTNTEQLVFIAALNISYELTQEKAKTRDYASSMEQRIRMLQQTIEQALLEQGRISERPGSKFE
>NZ_CP023963.1|WP_045387224.1|4480685_4481282_+|5-formyltetrahydrofolate-cyclo-ligase
MTIQPDIPLSRQQIRQQIRERRRALSAEQQQRFALQAAERMMAYPPVVLAHTVALFLSFDGELDTQPLIAQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIFNRLKIYEPRLDVRDVLPLAELDVLITPLVAFDASGQRLGMGGGFYDRTLQNWRQYRLQPVGYAHDCQQVDTLPSEQWDIPLPAVITPGKTWRW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023963_1	1.1\|886421\|54\|NZ_CP023963\|CRISPRCasFinder	886421-886474	54	NZ_CP023963.1	4821139-4821192	0	1.0
NZ_CP023963_1	1.1\|886421\|54\|NZ_CP023963\|CRISPRCasFinder	886421-886474	54	NZ_CP023963.1	4821053-4821106	1	0.981
NZ_CP023963_1	1.1\|886421\|54\|NZ_CP023963\|CRISPRCasFinder	886421-886474	54	NZ_CP023963.1	4821225-4821278	1	0.981

1. spacer 1.1|886421|54|NZ_CP023963|CRISPRCasFinder matches to position: 4821139-4821192, mismatch: 0, identity: 1.0

cgaacctctccccggtggcgctgcgcttaccggggctacaaaccggagcggacc	CRISPR spacer
cgaacctctccccggtggcgctgcgcttaccggggctacaaaccggagcggacc	Protospacer
******************************************************

2. spacer 1.1|886421|54|NZ_CP023963|CRISPRCasFinder matches to position: 4821053-4821106, mismatch: 1, identity: 0.981

cgaacctctccccggtggcgctgcgcttaccggggctacaaaccggagcggacc	CRISPR spacer
cgaacctctccccggtggcgctacgcttaccggggctacaaaccggagcggacc	Protospacer
**********************.*******************************

3. spacer 1.1|886421|54|NZ_CP023963|CRISPRCasFinder matches to position: 4821225-4821278, mismatch: 1, identity: 0.981

cgaacctctccccggtggcgctgcgcttaccggggctacaaaccggagcggacc	CRISPR spacer
cgaacctctccccggtggcgctacgcttaccggggctacaaaccggagcggacc	Protospacer
**********************.*******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023963_2	2.1\|1825451\|28\|NZ_CP023963\|CRISPRCasFinder	1825451-1825478	28	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	238670-238697	1	0.964
NZ_CP023963_2	2.2\|1825502\|34\|NZ_CP023963\|CRISPRCasFinder	1825502-1825535	34	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	238613-238646	2	0.941
NZ_CP023963_2	2.1\|1825451\|28\|NZ_CP023963\|CRISPRCasFinder	1825451-1825478	28	NZ_KM406416	Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence	3293-3320	6	0.786
NZ_CP023963_2	2.1\|1825451\|28\|NZ_CP023963\|CRISPRCasFinder	1825451-1825478	28	NZ_MF788070	Raoultella ornithinolytica strain 23141 plasmid p23141-2, complete sequence	59889-59916	6	0.786
NZ_CP023963_2	2.1\|1825451\|28\|NZ_CP023963\|CRISPRCasFinder	1825451-1825478	28	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	169438-169465	7	0.75
NZ_CP023963_2	2.2\|1825502\|34\|NZ_CP023963\|CRISPRCasFinder	1825502-1825535	34	NZ_CP010865	Marinovum algicola DG 898 plasmid pMaD10, complete sequence	31936-31969	8	0.765

1. spacer 2.1|1825451|28|NZ_CP023963|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 1, identity: 0.964

attatcaacaaccggcagctgcgccaca	CRISPR spacer
attatcaacaaccggcagccgcgccaca	Protospacer
*******************.********

2. spacer 2.2|1825502|34|NZ_CP023963|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 2, identity: 0.941

cgcccgtacaccatcagccggtagcgccgcagcc	CRISPR spacer
cgcccgtacaccatcagccggtagctccgcaacc	Protospacer
************************* *****.**

3. spacer 2.1|1825451|28|NZ_CP023963|CRISPRCasFinder matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 6, identity: 0.786

attatcaacaaccggcagctgcgccaca	CRISPR spacer
agcatcaacaaccgccagctacgccaat	Protospacer
* .*********** *****.*****

4. spacer 2.1|1825451|28|NZ_CP023963|CRISPRCasFinder matches to NZ_MF788070 (Raoultella ornithinolytica strain 23141 plasmid p23141-2, complete sequence) position: , mismatch: 6, identity: 0.786

attatcaacaaccggcagctgcgccaca	CRISPR spacer
attatcaacaacctgcagcagcggcttg	Protospacer
************* ***** *** * ..

5. spacer 2.1|1825451|28|NZ_CP023963|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 7, identity: 0.75

attatcaacaaccggcagctgcgccaca	CRISPR spacer
gacatcaccgaccggcagctgcgccagc	Protospacer
. .**** *.****************

6. spacer 2.2|1825502|34|NZ_CP023963|CRISPRCasFinder matches to NZ_CP010865 (Marinovum algicola DG 898 plasmid pMaD10, complete sequence) position: , mismatch: 8, identity: 0.765

-cgcccgtacaccatcagccggtagcgccgcagcc	CRISPR spacer
tcgagca-gcaccatcagcggatagcgccgcagcg	Protospacer
 **  *. .********** *.************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1725295 : 1758454

Salmonella_phage(45.0%)

terminase,plate,lysis

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032729766.1\|1725295_1725802_-	helix-turn-helix domain-containing protein	A0A0R6PJG5	Moraxella_phage	4.2e-13	54.9
WP_032729768.1\|1725851_1726121_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_047047935.1\|1726120_1726534_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	7.6e-45	70.5
WP_047065304.1\|1726799_1727834_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	7.7e-30	50.4
WP_047065306.1\|1727844_1728135_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_138069316.1\|1728161_1728557_+	hypothetical protein	NA	NA	NA	NA
WP_047065310.1\|1728776_1729565_+	hypothetical protein	C7BGF1	Burkholderia_phage	3.1e-63	52.7
WP_052766007.1\|1729561_1730041_+	hypothetical protein	A0A222YY85	Escherichia_phage	2.3e-05	32.1
WP_047065313.1\|1730037_1730382_+	hypothetical protein	NA	NA	NA	NA
WP_047065315.1\|1730374_1730698_+	hypothetical protein	NA	NA	NA	NA
WP_047065317.1\|1730698_1731061_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	1.7e-61	91.4
WP_080958006.1\|1731060_1731231_+	SEC-C domain-containing protein	NA	NA	NA	NA
WP_080958008.1\|1731316_1731898_+	DUF551 domain-containing protein	A0A088CE95	Shigella_phage	7.4e-22	41.4
WP_047065319.1\|1732295_1732625_+	hypothetical protein	K7PGV5	Enterobacterial_phage	8.7e-28	63.9
WP_032710292.1\|1732778_1733012_+	DinI family protein	H6WRY5	Salmonella_phage	3.4e-26	70.1
WP_165747425.1\|1733161_1733329_+	hypothetical protein	NA	NA	NA	NA
WP_047065323.1\|1733465_1733768_+	DUF968 domain-containing protein	A0A2I7QXN1	Vibrio_phage	9.2e-24	57.6
WP_047065325.1\|1733764_1734409_+	DNA methyltransferase	G8C7S6	Escherichia_phage	5.6e-87	73.5
WP_047065327.1\|1734405_1735014_+	hypothetical protein	H9C175	Pectobacterium_phage	1.3e-53	52.0
WP_049046135.1\|1735340_1735643_+	hypothetical protein	O64361	Escherichia_phage	4.0e-35	75.2
WP_047065329.1\|1735642_1736140_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	4.8e-78	83.0
WP_047065330.1\|1736136_1736604_+\|lysis	lysis protein	A0A2D1GLQ7	Escherichia_phage	4.8e-56	73.5
WP_047065332.1\|1736697_1736955_+	hypothetical protein	NA	NA	NA	NA
WP_047065334.1\|1737052_1737814_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	1.4e-12	80.0
WP_047065336.1\|1737767_1739168_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.6e-187	69.0
WP_047065338.1\|1739378_1740857_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	9.3e-154	55.5
WP_047065340.1\|1740924_1741458_+	phage Mu F like family protein	A0A0M4REK0	Salmonella_phage	9.4e-48	55.2
WP_047065342.1\|1741719_1743006_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	5.6e-78	42.8
WP_047065344.1\|1743017_1743521_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	8.1e-33	49.1
WP_047065346.1\|1743531_1744479_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	4.7e-98	55.9
WP_047065348.1\|1744527_1744896_+	hypothetical protein	NA	NA	NA	NA
WP_047065350.1\|1744864_1745272_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.2e-31	54.8
WP_047065352.1\|1745268_1745775_+	hypothetical protein	NA	NA	NA	NA
WP_047065354.1\|1745774_1746179_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	9.7e-45	72.3
WP_047065356.1\|1746171_1746723_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.7e-44	49.1
WP_047048095.1\|1746724_1747876_+	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	3.5e-180	82.5
WP_032710262.1\|1747887_1748328_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	2.7e-64	83.6
WP_047065358.1\|1748331_1748817_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	1.1e-47	63.5
WP_047065360.1\|1748852_1749005_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	1.1e-17	84.0
WP_047065361.1\|1748994_1750911_+	bacteriophage protein	A0A0M4REK7	Salmonella_phage	6.5e-224	63.9
WP_047065363.1\|1750910_1751498_+	bacteriophage protein	A0A0M3ULD5	Salmonella_phage	5.5e-73	77.2
WP_032710253.1\|1751497_1751800_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	4.0e-35	67.0
WP_047065365.1\|1751802_1752864_+	hypothetical protein	A0A0M4QX01	Salmonella_phage	5.0e-141	74.9
WP_086557771.1\|1752899_1753208_+	hypothetical protein	A0A0M4RTY3	Salmonella_phage	7.6e-34	85.7
WP_032710251.1\|1753298_1754525_+	GIY-YIG nuclease family protein	Q9MC01	Enterobacteria_phage	9.3e-99	62.2
WP_032710249.1\|1754595_1755249_+	hypothetical protein	A0A0M5M1K7	Salmonella_phage	2.2e-70	56.3
WP_047048067.1\|1755250_1755604_+	bacteriophage protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_047065366.1\|1755603_1756803_+\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	1.5e-154	70.8
WP_047065368.1\|1756799_1757573_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	9.7e-78	55.6
WP_075043638.1\|1757572_1758454_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	2.8e-28	60.2

DBSCAN-SWA_2

3523624 : 3576765

Cronobacter_phage(24.14%)

coat,integrase,tail,head,terminase,holin

attL 3538444:3538458|attR 3574400:3574414

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015365831.1\|3523624_3524791_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	4.3e-186	81.6
WP_061329578.1\|3525166_3525838_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.1e-80	61.3
WP_098949187.1\|3525830_3527096_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-203	81.5
WP_098949188.1\|3527095_3527386_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.5e-10	41.2
WP_098949189.1\|3527562_3528816_+\|tail	phage tail protein	A0A1J0MHZ5	Klebsiella_phage	1.3e-87	47.0
WP_098949190.1\|3528816_3530022_-	O-antigen ligase family protein	NA	NA	NA	NA
WP_098949191.1\|3530180_3530447_-	hypothetical protein	NA	NA	NA	NA
WP_138069320.1\|3530448_3532536_-	hypothetical protein	A0A1J0MG53	Serratia_phage	1.8e-171	53.8
WP_098949193.1\|3532593_3535071_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	0.0e+00	91.5
WP_098949194.1\|3535057_3535474_-	C40 family peptidase	F1C5F2	Cronobacter_phage	7.6e-69	86.8
WP_045363946.1\|3535436_3535907_-	hypothetical protein	F1C5F1	Cronobacter_phage	2.5e-76	89.7
WP_064743301.1\|3535906_3536404_-	hypothetical protein	F1C5F0	Cronobacter_phage	5.1e-88	89.1
WP_098949195.1\|3536403_3538704_-	tape measure protein	A0A1B1W284	Salmonella_phage	1.3e-98	35.8
3538444:3538458	attL	NA	NA	NA	NA
WP_098949196.1\|3538761_3539136_-	hypothetical protein	A0A0M4QWT0	Salmonella_phage	1.0e-24	46.8
WP_098949197.1\|3539208_3539952_-	hypothetical protein	G0ZNE7	Cronobacter_phage	2.5e-62	51.3
WP_098949198.1\|3540002_3540758_-	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	4.4e-51	47.8
WP_098949199.1\|3540816_3541200_-	hypothetical protein	NA	NA	NA	NA
WP_049047687.1\|3541196_3541565_-	hypothetical protein	F1C5E3	Cronobacter_phage	3.0e-45	78.7
WP_059476432.1\|3541567_3541930_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	5.6e-20	49.2
WP_098949200.1\|3541929_3542103_-	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	7.6e-15	59.6
WP_098949201.1\|3542102_3542483_-	hypothetical protein	F1C5E2	Cronobacter_phage	1.7e-30	56.9
WP_098949202.1\|3542485_3542767_-	hypothetical protein	NA	NA	NA	NA
WP_098949203.1\|3542799_3543855_-\|coat	phage coat protein	R9TMI8	Aeromonas_phage	7.7e-102	52.1
WP_098949204.1\|3543851_3544313_-	hypothetical protein	A0A2P1MXA8	Escherichia_phage	1.0e-29	49.3
WP_098949205.1\|3544312_3545674_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	9.3e-132	54.3
WP_098949206.1\|3545691_3546693_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	2.1e-112	67.1
WP_098949207.1\|3546625_3548089_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	1.8e-149	56.2
WP_098949208.1\|3548101_3549574_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	3.3e-252	83.5
WP_015705883.1\|3549573_3550176_-	hypothetical protein	G8C7P2	Escherichia_phage	4.9e-77	81.5
WP_098949209.1\|3550179_3550398_-	hypothetical protein	NA	NA	NA	NA
WP_098949210.1\|3550761_3551238_-	Rz lytic protein	NA	NA	NA	NA
WP_098949211.1\|3551225_3551870_-	glycoside hydrolase family 19 protein	F1C5D2	Cronobacter_phage	2.0e-36	43.3
WP_048961198.1\|3551853_3552225_-\|holin	phage holin family protein	A0A2D1GNJ3	Pseudomonas_phage	1.3e-06	32.4
WP_098949212.1\|3552735_3553425_-	antiterminator	I6PDF8	Cronobacter_phage	2.5e-56	51.1
WP_021571188.1\|3553534_3553894_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.0e-41	61.3
WP_000048136.1\|3553890_3554175_-	hypothetical protein	G8C7V5	Escherichia_phage	9.4e-47	95.7
WP_098949214.1\|3554167_3554836_-	metallophosphoesterase	K7P6H8	Enterobacteria_phage	3.8e-131	99.1
WP_098949215.1\|3554832_3555003_-	NinE family protein	K7P7K0	Enterobacteria_phage	4.1e-21	91.1
WP_098949216.1\|3554995_3555451_-	recombination protein NinB	I6R9D0	Salmonella_phage	6.8e-31	44.4
WP_098949217.1\|3555816_3556074_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	2.7e-24	70.1
WP_098949218.1\|3556123_3556696_-	hypothetical protein	NA	NA	NA	NA
WP_098949219.1\|3556773_3557211_-	hypothetical protein	C6ZR26	Salmonella_phage	1.5e-11	46.0
WP_098949220.1\|3557310_3557844_-	HNH endonuclease	A0A088F710	Idiomarinaceae_phage	2.7e-18	41.8
WP_086557534.1\|3557840_3558077_-	hypothetical protein	NA	NA	NA	NA
WP_098949221.1\|3558076_3558625_-	ead/Ea22-like family protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	1.9e-35	55.3
WP_071647602.1\|3558781_3558955_-	restriction alleviation protein, Lar family	A0A0U2QQP4	Escherichia_phage	3.9e-11	56.6
WP_098949222.1\|3558951_3559491_-	hypothetical protein	K7P858	Enterobacteria_phage	3.5e-18	46.3
WP_047075679.1\|3559487_3559790_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_098949223.1\|3559789_3561220_-	AAA family ATPase	Q9MCT4	Escherichia_phage	4.2e-183	66.9
WP_098949224.1\|3561209_3562106_-	DNA replication protein	F1C5C3	Cronobacter_phage	1.3e-97	59.1
WP_192942304.1\|3562098_3562575_-	hypothetical protein	NA	NA	NA	NA
WP_098949225.1\|3562586_3563129_-	toxin YdaT domain-containing protein	M9NZI6	Enterobacteria_phage	7.8e-74	80.0
WP_042892786.1\|3563225_3563453_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	9.0e-24	71.8
WP_098949252.1\|3563564_3564266_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	1.5e-98	80.0
WP_058674588.1\|3564510_3564717_-	hypothetical protein	K7P7I0	Enterobacteria_phage	1.5e-30	97.1
WP_098949227.1\|3565184_3565469_+	hypothetical protein	NA	NA	NA	NA
WP_131618409.1\|3565511_3565736_-	hypothetical protein	NA	NA	NA	NA
WP_015705909.1\|3565734_3565941_+	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	2.5e-25	76.5
WP_098949228.1\|3566011_3566296_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	3.7e-43	86.2
WP_098949229.1\|3566314_3567160_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	8.2e-70	60.3
WP_098949230.1\|3567156_3567837_+	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	3.5e-124	92.5
WP_064783986.1\|3567833_3568262_+	hypothetical protein	M9NYX4	Enterobacteria_phage	9.8e-64	81.0
WP_098949231.1\|3568258_3568915_+	DNA methyltransferase	G8C7S6	Escherichia_phage	8.7e-112	86.6
WP_098949232.1\|3568911_3569877_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	2.0e-141	68.4
WP_047076778.1\|3569873_3570092_+	hypothetical protein	NA	NA	NA	NA
WP_047076777.1\|3570088_3570778_+	hypothetical protein	M1F3E2	Salmonella_phage	1.8e-43	44.9
WP_047076775.1\|3570995_3571217_+	TraR/DksA family transcriptional regulator	Q9ZXI6	Pseudomonas_virus	3.9e-08	46.8
WP_047076774.1\|3571219_3571561_+	hypothetical protein	I3PV00	Vibrio_phage	2.2e-21	50.9
WP_045346713.1\|3571667_3571859_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	5.4e-30	93.7
WP_061329534.1\|3571839_3573018_-\|integrase	site-specific integrase	K7P703	Enterobacteria_phage	5.4e-221	93.1
WP_061329532.1\|3573199_3574624_+	exodeoxyribonuclease I	NA	NA	NA	NA
3574400:3574414	attR	NA	NA	NA	NA
WP_045367129.1\|3574662_3576765_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.2e-65	27.8

DBSCAN-SWA_3

3945014 : 4021789

Salmonella_phage(36.54%)

tRNA,protease,integrase,tail,transposase,terminase,holin

attL 3977422:3977438|attR 4018603:4018619

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049033429.1\|3945014_3947015_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_015365467.1\|3947024_3947900_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_015703148.1\|3948021_3948735_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.2e-37	35.7
WP_015365465.1\|3948877_3949912_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_015365464.1\|3949928_3950807_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_015365463.1\|3950960_3951530_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_015365462.1\|3951533_3952004_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_015365461.1\|3952067_3953132_-	AI-2E family transporter	NA	NA	NA	NA
WP_015365460.1\|3953355_3954819_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
WP_015365459.1\|3954828_3955188_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_086557519.1\|3955323_3956247_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.5e-72	56.9
WP_026612247.1\|3956243_3956945_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_015370403.1\|3957043_3958330_-	uracil permease	Q9KX94	Enterobacteria_phage	8.3e-66	38.1
WP_086557520.1\|3958426_3959053_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_042893018.1\|3959249_3960680_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_045392672.1\|3960929_3961967_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.7e-72	44.8
WP_086557521.1\|3961963_3962605_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	3.0e-32	43.3
WP_086557522.1\|3962658_3963999_-	hypothetical protein	NA	NA	NA	NA
WP_086557523.1\|3964420_3965872_+	MFS transporter	NA	NA	NA	NA
WP_086557524.1\|3965846_3966944_+	glycoside hydrolase family 88 protein	NA	NA	NA	NA
WP_015370394.1\|3966949_3968608_-	hypothetical protein	NA	NA	NA	NA
WP_015370393.1\|3968785_3970846_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_020078189.1\|3970849_3972376_+	exopolyphosphatase	NA	NA	NA	NA
WP_042893034.1\|3972424_3974656_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_015370389.1\|3975026_3975218_+	DUF2633 family protein	G9L6F2	Escherichia_phage	8.1e-18	75.9
WP_020078186.1\|3975221_3976115_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_042893036.1\|3976213_3977422_+	MFS transporter	NA	NA	NA	NA
3977422:3977438	attL	NA	NA	NA	NA
WP_015370386.1\|3977454_3977787_-	hypothetical protein	NA	NA	NA	NA
WP_004853132.1\|3977817_3978051_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_015370384.1\|3978285_3978786_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	5.9e-60	76.9
WP_015370383.1\|3978782_3979412_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	4.8e-99	84.7
WP_032723148.1\|3979401_3979707_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	6.0e-39	81.4
WP_032723149.1\|3979693_3980098_-	membrane protein	T1SA79	Salmonella_phage	3.2e-56	83.6
WP_032723150.1\|3980187_3980448_-	hypothetical protein	L0ARW5	Klebsiella_phage	6.2e-21	56.6
WP_080688397.1\|3980451_3982839_-\|tail	phage tail protein	R9TMK5	Aeromonas_phage	7.6e-89	37.5
WP_032723151.1\|3983032_3983293_+	hypothetical protein	T1SA06	Salmonella_phage	1.9e-33	82.4
WP_164511672.1\|3983610_3984306_+	BRO-like protein	A0A193GYJ9	Enterobacter_phage	6.0e-95	73.6
WP_047065066.1\|3984495_3984675_+	hypothetical protein	NA	NA	NA	NA
WP_077256719.1\|3984721_3985198_+	type II toxin-antitoxin system YafO family toxin	G9L6E0	Escherichia_phage	6.6e-61	71.6
WP_015370376.1\|3985241_3985802_-	hypothetical protein	NA	NA	NA	NA
WP_015370375.1\|3985804_3988351_-	hypothetical protein	W6MWW8	Pseudomonas_phage	1.7e-211	45.9
WP_098949238.1\|3988350_3990057_-	hypothetical protein	NA	NA	NA	NA
WP_015370373.1\|3990058_3992680_-	transglycosylase SLT domain-containing protein	T1SBJ1	Salmonella_phage	2.2e-49	53.2
WP_098949239.1\|3992691_3993231_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	1.4e-51	63.8
WP_032408585.1\|3993230_3993695_-	hypothetical protein	T1SA73	Salmonella_phage	9.6e-73	81.8
WP_098949240.1\|3993694_3996172_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.7
WP_015370369.1\|3996171_3996777_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.1e-88	78.5
WP_032723154.1\|3996776_3997100_-	hypothetical protein	G9L6C8	Escherichia_phage	3.1e-46	86.0
WP_086557525.1\|3997144_3997504_-	hypothetical protein	NA	NA	NA	NA
WP_086557526.1\|3997513_3997861_-	hypothetical protein	G9L6C7	Escherichia_phage	5.9e-35	67.8
WP_015370366.1\|3997871_3998309_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	5.1e-68	92.4
WP_086557527.1\|3998362_3999349_-	hypothetical protein	A0A193GZ49	Enterobacter_phage	3.4e-176	93.0
WP_086557528.1\|3999363_4000062_-	peptidase	G9L6C4	Escherichia_phage	9.1e-75	85.7
WP_032723159.1\|4000072_4000342_-	hypothetical protein	V5KSC6	Escherichia_phage	3.1e-23	83.8
WP_032723160.1\|4000347_4000644_-	hypothetical protein	T1SBI9	Salmonella_phage	8.6e-35	72.4
WP_086557529.1\|4000640_4002320_-\|tail	phage tail protein	T1S9Z7	Salmonella_phage	3.3e-264	81.2
WP_015370361.1\|4002334_4002541_-	hypothetical protein	T1SA67	Salmonella_phage	1.4e-07	89.7
WP_138069322.1\|4002756_4003155_-	hypothetical protein	NA	NA	NA	NA
WP_053064336.1\|4003194_4003527_+	hypothetical protein	NA	NA	NA	NA
WP_086557531.1\|4003570_4005040_-\|terminase	terminase	Q858H3	Salmonella_phage	1.2e-281	94.1
WP_015370358.1\|4005036_4005621_-\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	1.2e-85	84.5
WP_047075478.1\|4005678_4006008_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.3e-28	59.8
WP_086557532.1\|4006082_4006421_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.3e-50	90.0
WP_098949219.1\|4006413_4006851_-	hypothetical protein	C6ZR26	Salmonella_phage	1.5e-11	46.0
WP_086557533.1\|4006837_4007485_-	HNH endonuclease	G0YPP2	Erwinia_phage	1.8e-24	39.5
WP_086557534.1\|4007481_4007718_-	hypothetical protein	NA	NA	NA	NA
WP_086557535.1\|4008220_4008490_-	antitoxin	NA	NA	NA	NA
WP_176338754.1\|4008486_4008960_-	hypothetical protein	NA	NA	NA	NA
WP_086557536.1\|4009149_4009494_-	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	1.5e-51	85.1
WP_086557537.1\|4009613_4010399_-	replication protein	A0A193GYX1	Enterobacter_phage	7.2e-137	88.5
WP_176338755.1\|4010395_4011220_-	phage replisome organizer	A0A193GZ86	Enterobacter_phage	5.5e-55	81.7
WP_086557783.1\|4011411_4011615_-	hypothetical protein	Q858D5	Salmonella_phage	1.9e-25	85.1
WP_032723170.1\|4011761_4011992_-	hypothetical protein	A0A193GYK6	Enterobacter_phage	3.0e-35	90.8
WP_047065035.1\|4012146_4012734_+	helix-turn-helix domain-containing protein	G9L6A6	Escherichia_phage	8.2e-61	61.0
WP_162840112.1\|4012887_4013037_+	hypothetical protein	T1SA20	Salmonella_phage	2.5e-14	70.2
WP_047062753.1\|4013036_4013336_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	1.6e-20	50.5
WP_086557538.1\|4013621_4014443_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A193GYK2	Enterobacter_phage	1.0e-154	94.1
WP_086557539.1\|4014439_4015321_+	recombinase RecT	T1SBJ5	Salmonella_phage	2.5e-138	85.7
WP_015370341.1\|4015371_4015620_+	AlpA family phage regulatory protein	A0A193GYW1	Enterobacter_phage	8.5e-36	85.4
WP_032723171.1\|4015729_4016026_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	5.2e-32	69.7
WP_047075464.1\|4016018_4016609_+	adenine methylase	T1SA14	Salmonella_phage	3.1e-108	92.8
WP_063422380.1\|4016605_4016908_+	hypothetical protein	NA	NA	NA	NA
WP_086557540.1\|4016907_4017216_+	hypothetical protein	I6PD68	Cronobacter_phage	9.3e-24	53.9
WP_086557541.1\|4017232_4018483_-\|integrase	tyrosine-type recombinase/integrase	T1S9J3	Salmonella_phage	9.9e-197	81.4
WP_015703162.1\|4018675_4020253_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
4018603:4018619	attR	NA	NA	NA	NA
WP_015370334.1\|4020322_4021789_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.8e-88	38.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023963

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection