CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	10 crisprs	cas3,csa3,DEDDh,DinG,WYL	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023529_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_1

82161-82284

Orphan

Consensus_repeat	Method
CTCAACATAAAAGGCAACGCAGGTTGCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_1

>merge|NZ_CP023529|1|82161-82284|CRISPRCasFinder
CTCAACATAAAAGGCAACGCAGGTTGCCTTTTATGTGTTTTCTCCCTCTCCCCGTATGAGAGGGCCGGGGTGAAGGCATCAGGCCGCACAAGCTCAACGTAAAAGGCAACGCAGGTTGCCTTTT

>NZ_CP023529|1|1|82161-82284|CRISPRCasFinder
CTCAACATAAAAGGCAACGCAGGTTGCCTTTT	ATGTGTTTTCTCCCTCTCCCCGTATGAGAGGGCCGGGGTGAAGGCATCAGGCCGCACAAG
CTCAACGTAAAAGGCAACGCAGGTTGCCTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059178044.1\|69753_70416_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NZ_CP023529.1\|WP_059177991.1\|91794_92838_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023529.1\|WP_059177980.1\|77272_78358_+\|YncE-family-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP023529.1\|WP_082691905.1\|71723_72590_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP023529.1\|WP_059177975.1\|71042_71318_+\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|182151
NZ_CP023529.1\|WP_059177992.1\|92834_93488_-\|oxygen-insensitive-NAD(P)H-nitroreductase	unknown	unknown	gnl\|CDD\|182929
NZ_CP023529.1\|WP_059177988.1\|88279_89707_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_CP023529.1\|WP_133115692.1\|72670_74353_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP023529.1\|WP_059177981.1\|78411_80598_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP023529.1\|WP_059177983.1\|82486_83725_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340866
NZ_CP023529.1\|WP_059177990.1\|90724_91333_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|374267
NZ_CP023529.1\|WP_059177989.1\|89815_90688_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP023529.1\|WP_128131012.1\|75705_76536_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226233
NZ_CP023529.1\|WP_059177987.1\|86957_88202_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP023529.1\|WP_059177986.1\|85976_86954_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP023529.1\|WP_059177984.1\|83740_84766_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP023529.1\|WP_059177982.1\|80717_82106_+\|phenylalanine-transporter	unknown	unknown	gnl\|CDD\|236667
NZ_CP023529.1\|WP_059177979.1\|76519_76987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023529.1\|WP_059177985.1\|84758_85901_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP023529.1\|WP_059177974.1\|69001_69727_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|365939

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059178044.1\|69753_70416_-\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	1.25201e-15
NZ_CP023529.1\|WP_059177980.1\|77272_78358_+\|YncE-family-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	9.45375e-11
NZ_CP023529.1\|WP_082691905.1\|71723_72590_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.18882e-87
NZ_CP023529.1\|WP_059177975.1\|71042_71318_+\|DUF1471-domain-containing-protein	gnl\|CDD\|182151	PRK09929, PRK09929, hypothetical protein; Provisional.	1.10601e-41
NZ_CP023529.1\|WP_059177992.1\|92834_93488_-\|oxygen-insensitive-NAD(P)H-nitroreductase	gnl\|CDD\|182929	PRK11053, PRK11053, oxygen-insensitive NAD(P)H nitroreductase.	1.72825e-150
NZ_CP023529.1\|WP_059177988.1\|88279_89707_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.05418e-40
NZ_CP023529.1\|WP_133115692.1\|72670_74353_-\|HAMP-domain-containing-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.96679e-98
NZ_CP023529.1\|WP_059177981.1\|78411_80598_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.15631e-108
NZ_CP023529.1\|WP_059177983.1\|82486_83725_+\|MFS-transporter	gnl\|CDD\|340866	cd06177, MFS_NHS, Nucleoside:H(+) symporter family of the Major Facilitator Superfamily of transporters. The prototypical members of the Nucleoside:H(+) symporter (NHS) family are Escherichia coli nucleoside permease NupG and xanthosine permease. Nucleoside:H(+) symporters are proton-driven transporters that facilitate the import of nucleosides across the cytoplasmic membrane. NupG is a broad-specificity transporter of purine and pyrimidine nucleosides. Xanthosine permease is involved in the uptake of xanthosine and other nucleosides such as inosine, adenosine, cytidine, uridine and thymidine. The NHS family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.77952e-134
NZ_CP023529.1\|WP_059177990.1\|90724_91333_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|374267	pfam15977, HTH_46, Winged helix-turn-helix DNA binding.	4.77115e-26
NZ_CP023529.1\|WP_059177989.1\|89815_90688_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	6.37241e-37
NZ_CP023529.1\|WP_128131012.1\|75705_76536_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	2.25744e-15
NZ_CP023529.1\|WP_059177987.1\|86957_88202_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	8.55696e-37
NZ_CP023529.1\|WP_059177986.1\|85976_86954_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.19018e-102
NZ_CP023529.1\|WP_059177984.1\|83740_84766_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	8.86229e-40
NZ_CP023529.1\|WP_059177982.1\|80717_82106_+\|phenylalanine-transporter	gnl\|CDD\|236667	PRK10249, PRK10249, phenylalanine transporter; Provisional.	0
NZ_CP023529.1\|WP_059177985.1\|84758_85901_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.62484e-68
NZ_CP023529.1\|WP_059177974.1\|69001_69727_-\|response-regulator-transcription-factor	gnl\|CDD\|365939	pfam00196, GerE, Bacterial regulatory proteins, luxR family.	5.07903e-06

>NZ_CP023529.1|WP_059177982.1|80717_82106_+|phenylalanine-transporter
MKNASSASGNGLSEASSEQTPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGIAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWLPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGERANIDNLWKHGGFLATGWHGLIMSLAVIMFSFGGLELIGITAAEARDPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSDSSPFVMIFHDMNSNLVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPVNSLLLSGGITSLVVLINYVLPKEAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRKGRETQFKALLYPAGNYICIAFLAMILVLMCTLDDMRLSAFLLPVWIVFLFVAFKLSRKK
>NZ_CP023529.1|WP_059177981.1|78411_80598_+|TonB-dependent-siderophore-receptor
MNNTTMNKTLLALAIGTVMHSASAAETPKEDTLVVQAVPASDFKPGGDQLVPAFLDGQVANGGRMGMLGQQSAMDVPFNIISYTSKLVDDQQAKTIADVVANDAGVQSVQGYGNSAESFRIRGLKFDGDDMTFGGLSGVLPRQVVDAQMVDRIEIFKGANALMNGAASSGVGGMINLEPKHAGDVPQAKIGVDYTSDSQIGTTLDAGRRFGDSDQFGARVNLVHREGEAPVANDRRRTTLLSTGLDYKGDNFRTSVDMGYQKKTFHGSETGVNISAVDFVPTPPKNDRNYSQKWAYSNIENEFGMWRSEYDITDNWTAYTGLGAQHAHEEGLYSGAKLVDKSGKATATRLDTNRISDGVSGMAGLRGNFDTGFVSHKVNVGYSAQTKNEKIAWKMSKAADNPITNIYHNTGVDKPDSTNFGGSGGNYSDPLTSGRTRSQGWLLSDTLGVLDDKLLFTVGARHQKVVIRGYNKVTGAENQADSFDGSRWMPTYGVVYKPWNALSLYANHTEALQPGKTAPEGATNYGQSTGIVHSKQNEVGVKADFGRVGGSLALFEIKMPSAILDSVTNHYGLDAEQRNRGVELNVFGEPMLGMRLNASATWLQAELTKTNNGLNQGNDAVGVPNFYAVLGAEYDIKPIDGLTATARVNHSGSQYANLTNTKKLDSYTTLDLGMRYRFAVNQNQNQMTVRAGIDNVTDENYWSSVDDSGTYVFQGEARTFKVSVGYEF
>NZ_CP023529.1|WP_059177980.1|77272_78358_+|YncE-family-protein
MTKKLSALALLVAASLSGCAAQHAVKPTAAPEAKTAVTAPAETGVVKRELADGLYEMVLSPKGDALYVASSEGFKDVQGGVVYKLDPTTLKTIGRSHTDLKNFALAISPDGQTIYATNSLDGGITAINTADGKVKNRLLFTERNKEGYPYGARQVLLHGDVLYIGGVADPAVVWVVDANTLKLKKTIKNAGQWVTGLLWSEQTQRLYVANGGGEILTINPRNNRIEKRWKPLGDKPALLLNMAEDTATGRLFVTDNSKAKTTLVLDIHTGNVLKQLDVGDSMAVKFNAKRNEIYITQRESGKLLSLDATTYAVKQRWDLPPNPNSLLLSEDGQTLYVTVKQAFNKDHSTNGPDSVVRIALK
>NZ_CP023529.1|WP_059177979.1|76519_76987_+|hypothetical-protein
MMTKNKLALRWSLILLAIIIPLLYVGYIHVQRSNFNCEAHTTIVDDKYVVDVIMDYTFLGGSGTLETSGEYIPVNAPPVAISNKVSFNAWQENGEMVLISNETNELPKKTEAYRLTIPDFYHVRDRGLRFKLTPANASSYFFIYANSPIFYCTKG
>NZ_CP023529.1|WP_128131012.1|75705_76536_+|winged-helix-turn-helix-domain-containing-protein
MTTSDDAMKKVFLINDTLLFEPDLRRLGPLEGYPKRAITLHGPVNECLLLLLEHNDQVLTQRFLFASVWEKQGAIVSTNALYQTIASIRKALKSSGLDENIIKTIPKEGFKSVALVRTGERDEFVPSQKASPEAALTDLSSEMTIPDNVAPVAPQKRSFFASPLAYAVAGLMFILSCSVLVMTLKGNETAFKNYHHIGKINDCDVYSSWREKEKSIGMFNQLSKRYPINCNTGGMVWMTLNHAQRGSSVMICDRNPQDTQAQCNSIFYRKQNDDEE
>NZ_CP023529.1|WP_133115692.1|72670_74353_-|HAMP-domain-containing-protein
MQDIVKDLQSHSWTSDGQAILDNTAGAVNGYIETLTPFTKALTAKKESEIKLSTKVLAEDSETAYKLGRSNTLDLQHALLASQIAFIYSDIDSQVTVFKQHPTPALRQDILTRITSATTNSQQLLESVPEDQKAWLMAGISEMQTISAELANYEQLWTAQSDMSDILSTKAETLTKVIQDMFTRQQKMVVSTVSNVQMVMGIVAAIGIALGVLLALTITKSITRPLNETLRVAELIAKGDLTSTLTSTRRDEPGLLMQAVSTMNENLKNIINDVREGVESVARSSTEIAAGNMDLSARTEQQSAAVVETAASMEELTSTVALNAENANHARMLAEEASQNASEGSQISKKVIDTMKNVRSSSHRISEITTVINSIAFQTNILALNAAVEAARAGDQGKGFAVVAAEVRTLAQRSAQSAKEIESLINESVIHVDTGFTLVEGAGDAMSKIETSVAQVRDIMSEIASATDEQSRGIAQIAQAMTEMDTTTQQNAALVEESSAAASSLEDQAVQLEKVVSIFRVSNVPHQRKDSRPMSKASSVVALNTVKKDSHRDQNDWVQF
>NZ_CP023529.1|WP_082691905.1|71723_72590_-|EAL-domain-containing-protein
MENILNKHHSVPAGRGSILTRTVSWLKKSGSNSPLKTLQNAIDQRQITPFYQPFINGITGEIAGVEVLARWKHPSYGYVSPDVFIPLAEKHNLIIPLTHSLIQQVIADLQHQIHRFPVGTYICINISAQNCLDPSFEVDTCELLQKFTANQSHVVMEITERDPLHFTPELSDWFAALRRSDISVALDDFGTGYSNLSYISALNPEFIKIDKMFVSQIGVSDDTRLVDSLIDLAKNMRLKIIAEGVETQVQADYLRAKKIDFMQGFYFCKPLPVQELMRVVMAQALPPH
>NZ_CP023529.1|WP_059177975.1|71042_71318_+|DUF1471-domain-containing-protein
MKKTTALLLGTAILFTSNAFAAELLTREDFKKVESQYEKIGSVSTSGETAIADAKEELIKKADEKGADVLVLTSGNTENKIHGTADIYKKK
>NZ_CP023529.1|WP_059178044.1|69753_70416_-|EAL-domain-containing-protein
MRSVSREIIGIKLEPIVALTSSRIVGMELLSLLASPEKSEQFFQHQSADQSLMLLEAQLTALKNTPYSHNLFINLPITVFVETEHFRRVLPLLASGQNIEIVDPHAFLRLSAESRACVTQRLQILAERGCRIWLDDVDDGLIRAFLRCRLPLSGIKIDKLVFWRQRGTPALAQLVSRCAQVASNVLIEGIESHWDRECALQAGAGFGQGFYWPSMGWSEQ
>NZ_CP023529.1|WP_059177974.1|69001_69727_-|response-regulator-transcription-factor
MRMTVRRYRRRRKGSDSLGFSYSHSSPPFFDRLVSLSQSINQTRKTDTPFLILVTRDNFLHTGLQNGPSPLSHCCGYDALEPAFHALKNWPTARLVVDVEGRSSSLLDMLDALRRVILYPPFTPISLLVRSDDYDTRLFCKTTGPFEVLERQVSAPALQKALMATNSPSPHRSQWFSREEWTILQYLSQGQSLRHIALMRQRPYSRIVYRLGRILEKLGLHHRQELLHLLHRLSDPPSLSL
>NZ_CP023529.1|WP_059177983.1|82486_83725_+|MFS-transporter
MVSTTENSGKAIVQHRMLVPRLSLMMFLQFFIWGSWSVTLGLVMTQHNMSLLIGDAFSAGPIASILSPFVLGMLVDRFFPSQKVMAVMHLAGAGILMFVPGALMAENGALLIGLLFGYTLCYMPTLALTNNIAFHSLNNVDKTFPVVRVFGTIGWIVAGVFIGVTGVSSSVTIFQVAAVSSVLLALYSLTLPHTPAPAKGLPVQLRDLFCADAFALLKTRHFFIFSLCAMLISVPLGTYYAYTASYLADAGIADVSTAMSFGQMSEIVFMLVIPLLFRRLGVKYMLLIGMLAWFVRYAFFALGVSEEGRFLLYLGILLHGVCYDFFFVVGFIYTDRVAGEKVKGQAQSMIVMFTYGIGMLLGSQISGALYNSLVAGQTVPQAWVTFWWIPAVAAAVIALIFLVAFKYDDDKA
>NZ_CP023529.1|WP_059177984.1|83740_84766_+|sugar-phosphate-isomerase/epimerase
MKTIKGPGIFLTQFIGNQAPFNSLDGLAGWAAGKGYKAVQIPCHHPQIFDLEKAAESQTYCDEIAGKLAEYGLAISELSTHLEGQLIAVNPAYNEAFDHFAPPAVRGNDAARQAWATEKLKQAAAASAKLGLTAHATFSGSLAWPFVYPWPPHNEQRFREAFGELANRWRPILDCFDEHGVDLCFELHPGEDLHDGVTFERFLALVDNHPRCSILYDPSHMLLQQMDYLAFIDIYHSRIKAFHVKDAEYRPSGRSGVYGGYQPWLNRAGRFRSLGDGQIDFKGIFSKLTEYDFDGWAVLEWECCMKDGETGASEGSEFIRRHIIPVSGRAFDDFAAGDSHD
>NZ_CP023529.1|WP_059177985.1|84758_85901_+|Gfo/Idh/MocA-family-oxidoreductase
MINVGIIGSGFIGPAHIEALRRLGFVQVVALCDGTLEQAQEKAQALNIPHAYGNVEELLAHPDLHVVHNCTPNHLHAQINRQILRAGKHVFSEKPLCMTPEEARELVELAERAGVVHGVSFVYRQFAMVRQAQSMMREGSLGRLFASHGSYLQDWMLLDTDYNWRVDAALGGASRAVADIGSHWCDTVQFITGRRIVEVMADLSIVWPTRKANVAGNSTFTQEDSAVFENKAVTTEDFGSVLFRFDDGSKGSFSVSQVSAGRKNRLSFEINGSAKSVAWDQEVPQQLWIGHRSQANQTLSDDPGLMNRDAADSAHFPGGHIEGWPDAFKNMMAQFYRAVQTGVMPVKPLFATFYDGANVMYIIDAIVKSHQQQRWVSVLP
>NZ_CP023529.1|WP_059177986.1|85976_86954_+|LacI-family-DNA-binding-transcriptional-regulator
MSIQKIAQLAGVSVATVSRVLNNSDKVKANNRERVLQAIKESNYQPNLLARQLRTSRSYMILVMVSNIANPFCAEVVKGIEAEAEKKGYRILLCNSGSNIERSRSGLSLLSGKIVDGIITMDAFSKLPELSALIGNAPWVQCAEYADSGTVSCVGINDVDASQHVVSQLADSGRRRIALINHDLSYKYARLRERGYKSVVHLRDLDYQVVEYASDLSSSAGMAAMKKLLADNPPDAVFAVSDTLAAGAMRAIEQAGLRVPQDIAVVGFDGTELAEMVSPQLSTIEQPSQDIGRKAVDLLLNKIDNPDAPTERVMLDWRFVARAST
>NZ_CP023529.1|WP_059177987.1|86957_88202_-|mechanosensitive-ion-channel-family-protein
MQELIAQVEELGIEINHTTSLVLIFGIILLTAVIVHLILHKVVLRLFEKRAQASTHLWLQIITQNKLFHRLAFTLQGIIVNIQAALWLQKGSEAAEITMTCARLWVMVYALLSFFSLLDVIFNFSQKLATASQLPLKGIFQGVKLVSAIVVGILIISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKPGDWLEMPKYGADGAVTDIGLTTVKVRNWDNTISNIPTWALVSDSFKNWSGMSASGGRRIKRSLSIDTTSIHFLDEDEQQSLIKAKLLKPYMAARHEEINLWNQENGEGESVLNLRKMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPDANGLPIEIYAFTNTVIWAEYETIQADIFDHIYAVVEEFGLRIHQSPTGNDIRSLADAFAK
>NZ_CP023529.1|WP_059177988.1|88279_89707_-|MFS-transporter
MNTSVVSPGRAGLILLLTGQMLPLIDTSITNVALDSITQSLHTSPTQLELIVALYGVAFAVCLALGSKLGDNLGRRRLFMCGVAAFGVASLLCGMAGTVEQLLAARVLQGAGAALIVPQILATLHVTLKGTAHAKAISLFGGIGGIAFIVGQMGGGWLVSADIAGLGWRNAFFINVPICLVVLALSRHYVPETRRETPSRIDWQGTGLLAAILCCLLFPMALGAELHWPWFLQLALIAVIPLGLWMRASALRKQQRGEHPLLPPRLLKLTSIRFGMLIALLFFSAWSGFMFCMALTMQSGLGMAPWQSGNSFIALGVAYFVSAWYAPTLIARHSMGRILLTGLTIQIAGLLLLMATFWRFGQANTALTLAPATALIGYGQALIVNSFYRIGMRDISNCDAGAGSAILSTLQQATLGLGPTVLGTLFLMFERHNGGHYPQAMIGFLGIEVLMMLALGGVALWLRHQLNAGPLPAAS
>NZ_CP023529.1|WP_059177989.1|89815_90688_+|helix-turn-helix-domain-containing-protein
MTLMTEPVSSLQDDNRKQLGAFLRARRESLDPQRLGLPRSGRRRTPGLRREEVAMLADVGVTWYTWLEQGRDVNPSSVVMLAVAKALQCTATETRHLFVLAGLPPGEVPPQVPCEGISEGTRRLLDTLMPKPASIQKPNFDIVAWNDSFGHLMGVDFNEIPAEDRNCIYLFLTHPAWRSRLGKRADALSIFVSYFRAAMAEHRGDPQWEAQLARFFAVSEEFETLWHQGYDVRGVENQLKLFTHPQLGDFHLQQMYWYSAPRNGSRLLVYLPVDDEGEKVLAWLAENHHS
>NZ_CP023529.1|WP_059177990.1|90724_91333_-|winged-helix-turn-helix-transcriptional-regulator
MKPEGIIKTLIHEISDPSCIRHGQERTIISLDNYEHDMTFILHVGTVAVHRSTDQLLLKFTEAPMIIGMNDLFNTHEGMYYQIHGEIKYEIRKKSDILALLDSKNLWKEAAYCYMYGVKELLTAHKKSAGLTTYELIRQSLMTLMAKKETLRQTINTCDYIQEKTHISRSRVMKILSDLKIGNYIEIERGVLIKINKLPKTY
>NZ_CP023529.1|WP_059177991.1|91794_92838_+|hypothetical-protein
MNVTRKQERLLRRALSEWEQDGTLSNQEHLRLAGTLKRVAMDWQRLSRYAFWTALACVIIAFGSLFADSDMMARIIELLAFSSLARIGLPAVLAVVFYLWGFSRQRRETQWHYSTEAILFLGVLFTAIALWQLGERLDNGSGHIAPLFLAGCAVYGLVGFFGRSGLVWLFFLLSLGNWFGAQTGYMSGWGAYWLGMNYPVRFIFFGGALLALCWVLRAMLQQRNLYTTSKAMGLTYLFVALWIMSIFGNYDIDSWYGMTREALLPWALLFAVAAVACIFISLKTDDGMLRGFGLTFLAINLYTRYFEYFWDGMNKVIFFLILAGSLAVIGRYAERIWHTAERRAKSD
>NZ_CP023529.1|WP_059177992.1|92834_93488_-|oxygen-insensitive-NAD(P)H-nitroreductase
MDIISVARKRHSTKAFDPNFKLTAEQAEKIQTLLQFSPSSTNSQPWHFIVASTEEGKARVAKSAAGTYVFNERKMLDASHVVVFCAKTAMDDAWLERVVDQEDADGRFNTPEAKAANHKGRCYFADMHRVDLKDDDQWMAKQVYLNVGNFLLGVGALDLDAVPIEGFDAAILDAEFGLKEKGFTSLVVVPVGRHSVEDFNASLPKSRLPLSTIITEC

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Crispr_ID: NZ_CP023529_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_2

145044-145184

Orphan

Consensus_repeat	Method
TAAAAGTAAAATGGCAACGTTGTAGCCATTTTGAGTGTCTTCTCCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_2

>merge|NZ_CP023529|2|145044-145184|CRISPRCasFinder
TAAAAGTAAAATGGCAACGTTGTAGCCATTTTGAGTGTCTTCTCCCTCTCCCTGTGGTAGAGGGCGGGGTGAGGGGGCACCAGACCGCACAAGGTAAAAGTAAAATGGCAACGTTGTAGCCATTTTGAGTGTCTTCCCCTT

>NZ_CP023529|2|2|145044-145184|CRISPRCasFinder
TAAAAGTAAAATGGCAACGTTGTAGCCATTTTGAGTGTCTTCTCCCT	CTCCCTGTGGTAGAGGGCGGGGTGAGGGGGCACCAGACCGCACAAGG
TAAAAGTAAAATGGCAACGTTGTAGCCATTTTGAGTGTCTTCCCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059178703.1\|152106_153717_+\|(2,3-dihydroxybenzoyl)adenylate-synthase-EntE	unknown	unknown	gnl\|CDD\|236803
NZ_CP023529.1\|WP_059178704.1\|150921_152097_+\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP023529.1\|WP_059178714.1\|135957_136626_-\|enterobactin-synthase-subunit-EntD	unknown	unknown	gnl\|CDD\|182334
NZ_CP023529.1\|WP_059178720.1\|131300_131819_-\|ClbS/DfsB-family-four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|377957
NZ_CP023529.1\|WP_059178700.1\|155336_155750_+\|proofreading-thioesterase-EntH	unknown	unknown	gnl\|CDD\|182337
NZ_CP023529.1\|WP_059178711.1\|140618_140831_+\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP023529.1\|WP_059178713.1\|136872_139125_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410
NZ_CP023529.1\|WP_059178701.1\|154581_155337_+\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase-EntA	unknown	unknown	gnl\|CDD\|236190
NZ_CP023529.1\|WP_059178712.1\|139376_140582_+\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP023529.1\|WP_059178715.1\|135149_135989_+\|iron/manganese-ABC-transporter-permease-subunit-SitD	unknown	unknown	gnl\|CDD\|224033
NZ_CP023529.1\|WP_059178705.1\|149774_150734_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP023529.1\|WP_059178709.1\|145296_146097_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP023529.1\|WP_059178708.1\|146093_147086_-\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP023529.1\|WP_059178718.1\|132559_133471_+\|metal-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238557
NZ_CP023529.1\|WP_059178702.1\|153727_154582_+\|isochorismatase	unknown	unknown	gnl\|CDD\|224452
NZ_CP023529.1\|WP_059178707.1\|147082_148087_-\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP023529.1\|WP_059178716.1\|134295_135153_+\|iron/manganese-ABC-transporter-permease-subunit-SitC	unknown	unknown	gnl\|CDD\|224033
NZ_CP023529.1\|WP_059178717.1\|133474_134299_+\|manganese/iron-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|185016
NZ_CP023529.1\|WP_059178706.1\|148322_149570_+\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP023529.1\|WP_059178710.1\|140827_144700_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059178703.1\|152106_153717_+\|(2,3-dihydroxybenzoyl)adenylate-synthase-EntE	gnl\|CDD\|236803	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase.	0
NZ_CP023529.1\|WP_059178704.1\|150921_152097_+\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP023529.1\|WP_059178714.1\|135957_136626_-\|enterobactin-synthase-subunit-EntD	gnl\|CDD\|182334	PRK10251, PRK10251, enterobactin synthase subunit EntD.	4.97694e-66
NZ_CP023529.1\|WP_059178720.1\|131300_131819_-\|ClbS/DfsB-family-four-helix-bundle-protein	gnl\|CDD\|377957	pfam08020, DUF1706, Protein of unknown function (DUF1706). This family contains many hypothetical proteins from bacteria and yeast.	9.40816e-68
NZ_CP023529.1\|WP_059178700.1\|155336_155750_+\|proofreading-thioesterase-EntH	gnl\|CDD\|182337	PRK10254, PRK10254, proofreading thioesterase EntH.	1.00235e-96
NZ_CP023529.1\|WP_059178711.1\|140618_140831_+\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	2.91735e-24
NZ_CP023529.1\|WP_059178713.1\|136872_139125_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0
NZ_CP023529.1\|WP_059178701.1\|154581_155337_+\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase-EntA	gnl\|CDD\|236190	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated.	6.53667e-172
NZ_CP023529.1\|WP_059178712.1\|139376_140582_+\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP023529.1\|WP_059178715.1\|135149_135989_+\|iron/manganese-ABC-transporter-permease-subunit-SitD	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.7395e-71
NZ_CP023529.1\|WP_059178705.1\|149774_150734_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP023529.1\|WP_059178709.1\|145296_146097_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP023529.1\|WP_059178708.1\|146093_147086_-\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP023529.1\|WP_059178718.1\|132559_133471_+\|metal-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238557	cd01137, PsaA, Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	3.58468e-148
NZ_CP023529.1\|WP_059178702.1\|153727_154582_+\|isochorismatase	gnl\|CDD\|224452	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism].	1.9333e-132
NZ_CP023529.1\|WP_059178707.1\|147082_148087_-\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	6.00175e-176
NZ_CP023529.1\|WP_059178716.1\|134295_135153_+\|iron/manganese-ABC-transporter-permease-subunit-SitC	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.8356e-81
NZ_CP023529.1\|WP_059178717.1\|133474_134299_+\|manganese/iron-ABC-transporter-ATP-binding-protein	gnl\|CDD\|185016	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein.	0
NZ_CP023529.1\|WP_059178706.1\|148322_149570_+\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP023529.1\|WP_059178710.1\|140827_144700_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0

>NZ_CP023529.1|WP_059178710.1|140827_144700_+|enterobactin-non-ribosomal-peptide-synthetase-EntF
MSARLPLVAAQTGIWMAEQLSTLPNAWSVAHYTELNGEINAPLLAKAIVAGMMQADTLRTRFSEENGDVWQWIDETMVFAEPQIVDMRHHASPHAAAMALMEADLNQNLRVDSGQPLAFHQLIQVGENNWFWYQRYHHLVVDGFSFPAITRQIVNIYRALSGGQPTPESPFTPFSEVVDEYQRYRESEAYSRDGAFWAEQRKQLPPPVSLSAAPLPGRATTTDILRLKLTADSRAFSQLAQASGQVQRTDLALALVALWLGRLTGRLDYAAGFIFMRRMGSAALTATGPVLNVLPMAVNIDPHETLPALAQRLANQLKKMRRHQRYDAEQIVRDSGRAAGDEALFGPVLNVKVFDYQLELDGVQATTHMLATGPVNDLELALFPDEQGGLSIEILANKQRYDEATLTRHVARLDRLLAQFAANVSLKCGDAETVSPQEYQQLEHINDTGVALPHTTLSALVAEQAQKTPDAPALADAHIELNYRQMREQVVALATTLRERGVKPGDSVAVALPRSVFLTLALHGIVEAGAAWLPLDTGYPDDRLRMMLEDAQPTLLITTDDQLLRFSDLPIPSFSYNTLLPAAGNEPLGLCAPQQTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTAQDVVAQKTPCSFDVSVWEFWWPFIAGVKLVMAEPDAHRDPLAMQQFFAHYGVTTTHFVPSMLAAFVASLTPENAGCCASLKQVFCSGEALPTALCREWEELTHAPLHNLYGPTEAAVDVSWYPAFGDALAAVSGNSVPIGFPVWNTGLRILDGLMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRAMLSLPDVAQAVAHACVFNQAAATGGDARQLVGYVVSESGLPLDREALLDALKAQLPAHMVPVVLLQISELPLSANGKLDRKALPMPDLTHSASGRVPETATEIAVAQAFSDLLGCDVNDIEADFFALGGHSLLAMRLAAQLSRTFSRKVTPGQIMVASTVNQLSTLLASQISDEQAQRLGFETILPLRQSDGPTLFCFHPASGFAWQFSVLARYLNPRWSITGIQSPRPEGPMAQCTTLDEVIAHHLNTLRAQQPHGPYYLFGYSLGGTLAQGIAARLREQDEEVAFLGLLDTWPPETQNWAEKEANGLDPQVLAEIEREREAFVAAQQGQASSELFNAIEGNYADAVRLLTTARSSRFEGKATLFVAERTRKMDPQQAWEPWVNELEVYHQDCAHVDIISPQAFEQIGPVLKEILG
>NZ_CP023529.1|WP_059178711.1|140618_140831_+|MbtH-family-NRPS-accessory-protein
MEFSNPFDNPQGQFAILQNHHGEYSLWPQGGALPAGWRVICEPQSLQDCEQWLTENWQTLVPSHFAEDKA
>NZ_CP023529.1|WP_059178712.1|139376_140582_+|enterochelin-esterase
MTALTTGSEAWWQSKNGPEWTREKDLYRVTFWWRDPASTARSSAIKRVWIYITGVTDHHQNAQPQSLERIPDTDVWRWQGDFSPEWRGSYCFIPSENEHDFAEAVFSAAAPDRMALREGWGKLLPRAISDPLNPQSWRGGRGHPVSALEMPHAPVQPGWNHADTPFSPPECIDWHSPRLGNSRRVWIFTTGDENPAERPLAVLLDGQFWAESMPVWSPLAALTQEGQLPPAVYLLIDVIDTAHRSRELPCNADFWLAVQEELLPQIQALTPFSARADRTVVAGQSFGGLSSLYAALNWPQRFGCVLSQSGSYWWPHRSADQDGQLIEQLKAGEKSATGLRIVLEAGRREPLIFRANQALYAQLQHPQHTVFWRQVDGGHDALCWRGGLTQGLMTLWQPLIH
>NZ_CP023529.1|WP_059178713.1|136872_139125_-|TonB-dependent-siderophore-receptor
MNKKIHSLALLVNLGIYGVAAPAMADDATASSASHEDTMVITAAEQNLQAPGVSKITADEIRKNPPARDVAEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMVESIEVIRGPAAARYGNGAAGGVVNIITKKFDDQWHGSWNTYLNAPEHKDEGSTKRTNFNLSGPLGGEFSFRLYGNLDKTQADAWDINQGHQSERTGMYADTLPAGREGVENKDVNGVVRWDFAPMQSLEFEAGYSRQNNLYAGDTQNTNNDNSSNGLVKKNYGKETNRIYRQNFAVTWNGGWDNGVTTSNWAQYEHTRNSRLGEGLAGGLEGLFNSDKFTDTDLSDVMLHSEVNLPIDFLVNQNLTLGTEWNQQRMKDMSSNGQAQQGGTIPGMSDDRSPYSSAEIFSLFAENNMELTDSTMLTPALRFDHHTIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASGDGVGCYMMGNDDLKAETSINKEIGLEFKRDGWMAGVTWFRNDYRDKIEAGYAPIDQTSLGKTKTDIYQWENVPKAVVEGLEGTLNVPVTETVNWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVHQDVSLQSTFTWYGKQQPKKYNYKGKPVTGSESDEVSPYSIVGLSASWDVTKNVSLTGGVDNVFDKRQWRAGNAQTTGNDKTGAYMSGAGAYTYNEPGRTWYMSVNTHF
>NZ_CP023529.1|WP_059178714.1|135957_136626_-|enterobactin-synthase-subunit-EntD
MRTLHTTFSLARQTVHQITFEPATFSDADLLWLPHHQQLAHAAHKRKAEHLAGRIAAAHSLQEFGVRAIPGIGVNSEPLWQTGIVGSITHTAACALAVASNHTQQLLGIDCEQILDALEAQEIKNGIISHEEETLLRRNSLPFALALTLTFSAKESVFKALFPRVNALMGFDSARITALTADNLTLALTRPLAGFKEGTPFTLHWLRDGERVITLLSHFPAA
>NZ_CP023529.1|WP_059178715.1|135149_135989_+|iron/manganese-ABC-transporter-permease-subunit-SitD
MIALLLEPFQFAFMNNAMLISLMVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWMLGLPLALGAFVAGLFCAVATGYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAVKPEVHLDHILFGDMLGINAMDITQSGIVAALITLVIGLKWRDFLLFCFDFQQAQVSGLRTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLVTTRFHVALLVAVLISMLVSVSGVYLSFYLDSAPAPTIVVLFALVFIITFVVTSVKAKRRENVTAG
>NZ_CP023529.1|WP_059178716.1|134295_135153_+|iron/manganese-ABC-transporter-permease-subunit-SitC
MNTLLEPFGYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAASMLFLNQRSRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPEDIVQLTIIGVVSIVILLFKWKDLMVTFFDENHARAIGLRPERLKVLFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVVIGSLTSFLGAWASYYLDGATGGIIVVAQTLLFLLAFVFAPKHGLLANRRRARQVREVKE
>NZ_CP023529.1|WP_059178717.1|133474_134299_+|manganese/iron-ABC-transporter-ATP-binding-protein
MQAQGIVVSDVTVTYRNGHTALRNATFSVPGGSIAALVGVNGSGKSTLFKAVMGFVRAASGNIAILGMPTQQALRQNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGFMRIPKEKDRQMVTEALARVDMLELRHRQIGELSGGQKKRIFLARAIAQQGEVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTDFCDYTVMVKGTVLASGPTETTFTAENLERAFSGVLRHVVLSGSEDRIITDDERPFVSHRLPADKREPL
>NZ_CP023529.1|WP_059178718.1|132559_133471_+|metal-ABC-transporter-substrate-binding-protein
MRPWQGFRKVLFGILFTAVSTSGALAAEKFRVITTFTVIADMAKNVAGDAAEVTSITKPGAEIHEYQPTPGDIKRAQNAQLILSNGMNLELWFQRFFQHLKGVPEVEVTKGITPMGISEGPYNGKPNPHAWMSPDNALIYVDNIRDALMKYDPTNAQTYQRNAEIYKQKITQTLEPLRKQVADIPEDKRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVIDQVKKNHIPAVFSESTVSDKPARQVARETDTHYGGVLYVDSLSAENGPVPTYLDLLNVTTRTLVQGIHDGIKE
>NZ_CP023529.1|WP_059178720.1|131300_131819_-|ClbS/DfsB-family-four-helix-bundle-protein
MTVPQTKAELLSAIDTNFTKLMGYLNAIPEDMTLHPSMDGHAKGTEMSVRDLVSYLLGWNHLVVKWITSDEKGLLVDFPETGFKWNQLGLLAQKFYADYKELNYHALLTELESVKEKIVRLIAERPDDVLYGKPWYTKWTMGRMISFNTSSPYANANARLRKWAKNNQFNLK
>NZ_CP023529.1|WP_059178709.1|145296_146097_-|iron-enterobactin-ABC-transporter-ATP-binding-protein
MTQTATRLRGENLTLGYGKKTVAHELNVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPQHGSVYLDGEQIQQFASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPMFTRWRKEDEAAVTAAMRATGITDLAGQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSDLNRTQGYTLAAVLHDLNQACRYATHLIALRDGKIVAEGAPKEIVTPELIERIYGMRCMIIDDPIAGTPLVVPIGRRAV
>NZ_CP023529.1|WP_059178708.1|146093_147086_-|iron-enterobactin-ABC-transporter-permease
MITPSRRLVSTCLLLVLASLMAAVWSLRSGAVTLDFMQVFDAFTGSAPRNITMVVTEWRLPRVVMAILVGAALGVSGAIFQSLLRNPLGSPDVMGFNTGAWSGVLVAMVLFGQHLTAIAFAAMAGGVLTSLVVWAMAWRNGIETFRLIIIGIGIRAMLMAFNTWLLLRASLETSLSAGLWNAGSLNGLTWAKTLPATPIIMLMFVCAWLLVRRMRLLEMGDDSACALGVGVERSRLTLMLVAVVLTAAATAIAGPISFIALVAPHIARRMSGTARWGLTQSALCGALLLLVADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP023529.1|WP_059178707.1|147082_148087_-|Fe(3+)-siderophore-ABC-transporter-permease
MLSSPLAVRAVAVPFLLLLLILAMALSLLVGAKPLPASVIFDALSGTCQSADCTIVLDARLPRTLAGLLAGAALGLAGALMQTLTRNPLADPGILGVNAGASFAIVLGAALFGLSSPTEQLVMAFCGALAASLLVAFTGSQGGGQLSPVRLTLAGVALGAVLEGLSSGIALLNPDVWDQLRFWQAGSLDIRTLQTLHIVTIPVLIAAIVALFLSRALNSLSLGSDTATALGSRVARTQLIGLLTITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPVLLLFADIIGRVLVPGELRVSVVSAFIGAPVLIFLVRRKRGGGL
>NZ_CP023529.1|WP_059178706.1|148322_149570_+|enterobactin-transporter-EntS
MNQKSWLLNLSLLKTHPAFRAVFIARFISILSLGLLGVAVPVQIQAMTQSSWLVGLSVTLTGSAMFIGLMVGGVLADRYERKKLILLARGTCGVGFIGLCLNAMLPEPSLIAIYALGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLATGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLMAAIRFLFSNPLIGGIALLGGLLTMASAVRVLYPALAMEWQMSASQIGLLYAAIPLGAAFGALTSGNLAHSARPGLIMLSATVASFIAIAFFSLMPFWALGVVCLALFGWLSAVSSLLQYTLIQTQTPEGMLGRINGLWTAQNVTGDAIGAAILGGLGVIMTPMASASSSGFVLAIVGVILLITLAELRRFRQEGVLKDSAA
>NZ_CP023529.1|WP_059178705.1|149774_150734_-|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKFPAVCRYALLLAGLFVLGLTSAIAADWPRQVTDSRGVHTLESKPTRIVSTSVTLTGSLLAIDAPVVASGATTPNNRVADAQGFMRQWGDIAKKRQVSRLYIGEPSAEAVAAQMPDLILISATGGDSAMALYDQLSTIAPTLVINYDDKSWQELLTQLGTLTGHEKQAAARIAEFDQQLTLVKQQMKLPPQPVNALVYTAAAHSANLWTAESAQGKFLQQLGFQLAELPAGLNTSKSQGKRHDIIQLGGENLAAGLNGQGLLLFAGDQKDVDAIYANPLLAHLPAVQNKRVWALGTETFRLDYYSAMLVLERVNALFK
>NZ_CP023529.1|WP_059178704.1|150921_152097_+|isochorismate-synthase-EntC
MDTSLAEEVQHTATTLQSDSFFFMSPNRSFTTSGCFARFSESAAGGDDPAGAFQQKLAQAFNDAKASGISHPIMVGAIPFDTRKPSSLFIPQSWQTFSRPARQKSARYHSGAQELTVVSRTEIPPQPVFEEMVARAAALTATPQVNKVVLSRLIDIATDRHIDSGALLERLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDMLDREAGNKLLASEKDRHEHDLVTQAMKTVLEQRSHKLAMPSSPQLITTPTLWHLATPIEGEARENENALTLACLLHPTPALSGFPHQAAKEIIASLEPFDRELFGGIVGWCDSEGNGEWVVTIRCARLHENTVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH
>NZ_CP023529.1|WP_059178703.1|152106_153717_+|(2,3-dihydroxybenzoyl)adenylate-synthase-EntE
MTLPFTRWPEEFARRYREKGYWQDVPLTDILTRHADSDATAVFDGERQYTYRQLHKAVNNLASALQAQGIKRGETALVQLGNVAEFYITFFALLQAGVAPVNALFSHQRSELNAYALQIAPALVIADRQHALFADDDFLNTFVDEHRSVRVVLLRGDNGEHALETAIARPADNFIASPTPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSILRSNEVCGITAETRYLNALPAAHNFAMSSPGSLGVFMAGGCVALANDPSATLCFPLIEKHQLNVASLVPPAVSLWLQAIAEGAGNAQLASLTLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTAIDDTPERIMNTQGRPMCPDDEVWVADENGQPLPRGEVGRLMTRGPYTFRGYFNSPEHNASAFDADGFYCSGDLISIDEQGYITVQGREKDQINRGGEKIAAEEIENLLLRHESVIHAALVSMEDSLLGEKSCAYLVVKKPLRAVDVRRFLREQGIAEFKLPDRVESVDALPLTPVGKVDKKQLRLWLAERAQG
>NZ_CP023529.1|WP_059178702.1|153727_154582_+|isochorismatase
MAIPKLTGYALPTAAELPNNKVNWAFEPERAALLIHDMQEYFLNFWGENCPMMVQVVANIAQLRDYCKKHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQRIVSELTPDEADTVLVKWRYSAFHRSPLEQMLKETGRNQLLITGVYAHIGCMTTATDAFMRDIKPFFIADALADFSREEHLMSLNYVAGRTGRVVMTDELLPSVPASKEALRAVILPLLDESDEPMDDENLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTLDAWWALLSREVK
>NZ_CP023529.1|WP_059178701.1|154581_155337_+|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase-EntA
MAGFDFTGKTVWVTGAGKGIGYATALAFVEAGAQVTGFDLAFPANDYPFATETLNVADASQVNDVCERLLRNIERLDVLINAAGILRMGATDRLSQDDWQQTFAVNVGGAFNLFQQTMGQFRRQQGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALTVGLELAGSGVRCNIVSPGSTDTDMQRTLWVSDDAEQQRIRGFGEQFKLGIPLGKIARPQEIASTILFLASDHASHITLQDIVVDGGSTLGA
>NZ_CP023529.1|WP_059178700.1|155336_155750_+|proofreading-thioesterase-EntH
MIWKRHLSLEELNATSLNTMVAHLGMVYTRIGDDTLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGFLMTRDGQNVVGTELNATHHRAVSQGKVRGVCQPLHLGRQNQSWEIVIFDEQGRRCCTCRLSTMVLG

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023529_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_3

860966-861089

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_3

>merge|NZ_CP023529|3|860966-861089|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAAAATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP023529|3|3|860966-861089|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAAAATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059178135.1\|859164_860775_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP023529.1\|WP_072241814.1\|857229_857370_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023529.1\|WP_012017168.1\|852998_853208_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP023529.1\|WP_059178133.1\|862850_863489_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP023529.1\|WP_059178136.1\|858361_858997_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
NZ_CP023529.1\|WP_059178128.1\|870624_871791_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP023529.1\|WP_059178141.1\|853454_854141_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP023529.1\|WP_059178138.1\|855730_856561_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270407
NZ_CP023529.1\|WP_059178130.1\|866807_868007_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP023529.1\|WP_012017183.1\|869049_870075_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP023529.1\|WP_040075924.1\|870371_870461_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
NZ_CP023529.1\|WP_059178140.1\|854137_854914_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP023529.1\|WP_059178137.1\|857497_858289_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293813
NZ_CP023529.1\|WP_059178131.1\|865361_866510_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP023529.1\|WP_059178127.1\|871829_872411_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP023529.1\|WP_059178132.1\|863943_865221_+\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP023529.1\|WP_072241778.1\|856807_856975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023529.1\|WP_059178129.1\|868119_869031_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP023529.1\|WP_059178134.1\|861249_862623_-\|MdtK-family-multidrug-efflux-MATE-transporter	unknown	unknown	gnl\|CDD\|234981
NZ_CP023529.1\|WP_059178139.1\|854913_855729_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059178135.1\|859164_860775_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP023529.1\|WP_012017168.1\|852998_853208_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	1.12974e-36
NZ_CP023529.1\|WP_059178133.1\|862850_863489_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	1.09219e-123
NZ_CP023529.1\|WP_059178136.1\|858361_858997_+\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.2224e-91
NZ_CP023529.1\|WP_059178128.1\|870624_871791_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.11449e-99
NZ_CP023529.1\|WP_059178141.1\|853454_854141_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	5.96111e-42
NZ_CP023529.1\|WP_059178138.1\|855730_856561_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270407	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold. This group includes periplasmic glutamine-binding domain GlnP from Bacillus subtilis and its related proteins. The GlnP domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.75416e-107
NZ_CP023529.1\|WP_059178130.1\|866807_868007_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP023529.1\|WP_012017183.1\|869049_870075_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP023529.1\|WP_059178140.1\|854137_854914_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.1808e-51
NZ_CP023529.1\|WP_059178137.1\|857497_858289_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293813	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YmaE and Nostoc all1228 proteins.Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. .	2.95158e-50
NZ_CP023529.1\|WP_059178131.1\|865361_866510_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP023529.1\|WP_059178127.1\|871829_872411_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	7.73481e-136
NZ_CP023529.1\|WP_059178132.1\|863943_865221_+\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	8.80802e-113
NZ_CP023529.1\|WP_059178129.1\|868119_869031_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP023529.1\|WP_059178134.1\|861249_862623_-\|MdtK-family-multidrug-efflux-MATE-transporter	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP023529.1\|WP_059178139.1\|854913_855729_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.00032e-138

>NZ_CP023529.1|WP_059178135.1|859164_860775_-|FAD-NAD(P)-binding-protein
MKKIAIIGAGPTGIYTFFSLLRHKTPLSVTIYEQAEEAGVGMPYSDEDNSRMMLANIASIEIPPLFSTYIDWLRTQEPAHLARYGVDKSSLHVRQFLPRILLGEYFRDQFLELVQQARKTGFEVNVIESCQVNDLEALPDGVTVWAENQSSPEVFDLAVIATGHVWPEDDTSTRAFFPSPWSGLMAADIRACNVGILGTSLSGLDAAMAVVIQHGTFTETDNHCVTFRLDEGSESLNIVLASRSGILPEADFYCPIPYEPLTLATEQAIENEIAAGAEGLLDRVFALMVQELEHADPHWSQTVALNTLNADSFHDAWFAERHKHDPFHWAESNLEEVERNKRDKRTVPWRYTILRLHEVVQDIVPHLNEKDRKRFDAGLARVFIDNYAAIPSESIRRLLALREAGIISVVALGADYDMEVKENLTVIRTQDKTYEFDVFIDARGQKPLKTKDLPFPRLRKQIEATGDAIPDVGDDYTLLEPEDVRGKIAFAALPYLMHDQPFVQGLVVSAEIGEAIAQAVNRQTSKTRKRLPFIEM
>NZ_CP023529.1|WP_059178136.1|858361_858997_+|carbonic-anhydrase
MQHIIEGFLSFQKEVFPQRKELFRSLASSQNPKALFISCSDSRLVPELVTQQEPGQLFVIRNAGNIVPSFGPEPGGVSATIEYAVVALGVTDIVICGHSNCGAMKAIADNANLDPMPAVSHWLRYSDAAKAVVEQKTWDNPTDKVNAMVQENVIAQLNNVKTHPSVAVGLRNNAIRLHGWVYDIESGDIRALDKDSKSFVSLSDNPQVYFE
>NZ_CP023529.1|WP_059178137.1|857497_858289_+|MBL-fold-metallo-hydrolase
MIILCKTCGTSYDASRGTVERCKICEDERQYVPVSGQSWVDFDTVITSHTNKWQQLEPHLLSLKTVPKFAINQRAFLLRTPQGNVLWDCIANLDAATQTLITALGGISAIAISHPHYYTTMQDWAAAFDAPVYLHASDRKWVMRDSPVLHFWDGDVLDILPSVRLLRLGGHFAGGTVLHWHEGDGVLLAGDILQVTPGADRVSFMWSYPNMLPLPGAVVEEIVRRLSPVKFDRLYGAFEGQNINAHAHEIVMHSGQKYISCLK
>NZ_CP023529.1|WP_072241814.1|857229_857370_-|hypothetical-protein
MEIDLDNLVFNGLDEAEERNAERLEDADKKAQAVVADDDCGDACKI
>NZ_CP023529.1|WP_072241778.1|856807_856975_+|hypothetical-protein
MQNWVNTLRRFFAIPSERAENSAQRVIESVLPIASLYGVDVANIDPEWFHDKTSR
>NZ_CP023529.1|WP_059178138.1|855730_856561_-|ABC-transporter-substrate-binding-protein
MATHKKHYQQLVLALGLLTAGGILSTQAQADQLADIKAAGVVKVATFDANPPFGSIDAKTHDIVGYDVDFAKALAKSLGVKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDFSTPYFVTGQQFLVPVKSADKLDAYSKARIGAVKGTTGEQALHQRFPQSRVLSYDDIPLALTALRNGNVQAITQDSTILAGLLAQAPDKAHFKILPDLLSKEEIGVGVKKGETALLNVVNTELVNLEKSGEAAKIYDVWFGPQTPSPQPRAFKIEAQ
>NZ_CP023529.1|WP_059178139.1|854913_855729_-|amino-acid-ABC-transporter-ATP-binding-protein
MLSGLLSRSAARAADFSHLEHASVEFRNVVKRYGDHQVLNRINFTVAPGEVVAILGPSGSGKSTMIRLINQLESLNGGDILIDNKPTRALTGTALRQLRSRVGFVFQQFNLYAHLSASENISLALEKVHGWTPPLAQARALALLEHVGMVEKAHHYPAQLSGGQQQRVAIARALASSPQIILFDEPTSALDPEMIGEVLQVMKSLAHSGITMIVVTHEMQFAREIADRVVFIDGGEILETAPPAQFFQHPEHPRTRRFLQKVLNPLHQEQP
>NZ_CP023529.1|WP_059178140.1|854137_854914_-|amino-acid-ABC-transporter-permease
MPALDWQGVLTGQPVQWILSGFLTTLWVTLAGIIIASSLAILFLLLRTAGGKTGNIVVSVWVSLFRNTPLLVQLLFWYFAAWNWLPFTLRDYINGEHTWSVLPGDVWWFTPEFLCSAWGLGVFTSAFLVEEIESGLQAVSRGQRQAALAQGFSSWQIFRFILLPQGLAHAWQPVVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFTVGTVLYLLTGVLMGLLLGKLGPSCAKRIQRAPKITIATGSENA
>NZ_CP023529.1|WP_059178141.1|853454_854141_-|amino-acid-ABC-transporter-permease
MIAGLAVITDNLDYLLWGRLSAGQPGGVLLTLLMALGAAVLALPTGIALASLAWRFPGMVRKVLYVWAEVIRGIPLIFVIFWMWYLLPLLTGGDMPGAVTVTLALAWFTAAAVMHSVLAGLRALPTGQYEAALTQGFGTQQTLWLILLPQVFRTILPSLLGIFISLLKDTSLAFIVNVPELTTVAGQVNNRVQIYPAAIFIFTGLVYYLLCCALEQIAKRWRATRPAF
>NZ_CP023529.1|WP_012017168.1|852998_853208_+|fumarate-hydratase-FumD
MGNITKDEALYQEMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTSLANQRIKRSELTTQAMETVIKSLAG
>NZ_CP023529.1|WP_059178134.1|861249_862623_-|MdtK-family-multidrug-efflux-MATE-transporter
MQKYMLEARQLLALAIPVILAQVAQTSMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSILVMVVLWNAGYIIRSMDNIDPALADKSVGYLRALLWGVPGYLLFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFFSMISYVKRARSMRDIRNEKRFSKPDMDVLKRLTQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLGVGVCMAFCTALFTIALREQIALLYNDNPEVITLASHLMLLAAIYQLSDSIQVIGSGILRGYKDTRSIFFITFTAYWVLGLPTGYILALTDLVVDRMGPAGFWIGFIIGLTSAAILMMLRMRFLQRQPSSVILQRAAR
>NZ_CP023529.1|WP_059178133.1|862850_863489_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNRISFDLMKETLRITNLGELVEGDTVNVERAAKFSDEIGGHLMSGHIMTTAEISKILTSENNRQIWFKLQDPTLMKYILYKGFIGVDGISLTVGEVTPTRFCVHLIPETLQRTTLGNKKIGHRINIEIDPQTQAVVDTVERVLAAKQAASQFGSEE
>NZ_CP023529.1|WP_059178132.1|863943_865221_+|PTS-ascorbate-transporter-subunit-IIC
MDILLGLVKTPAVIIAIVAFLGLLFQKASVSRLITGTALSFIGFTMIKVGGSILMKVLTAFSSLFSKAFDIVGVVPSNEAIMAATIDKLGATAALILLFSMILNIILARFTRFKFIYLSLHLVLFMAFALTAVLMQFGFSNYQMVMICSVLIGTYMAVSPFILNRFSREIIGSDEYAISHAAISSYIIGSYMGKWFGNKSTDTEHLKISNKFDFIREPNIATLLTMLVLLLISCLFATQPQVKDAMTMVYGPGAGDKNVVIFILEQSAIFACGLYLAKAGVNLFTAEIVPAFKGFARVFAPGAVPAVDVMVLFTKAPNATLIGFLISFIVELVCILIFPVIGLPIIVPGIMASFITGGAAAIFGNATGGFRGAVIASGINGLLLCVLPALTLPIFSQLGAHGVTFADPDFTLPSLILDYILRIFS
>NZ_CP023529.1|WP_059178131.1|865361_866510_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSLRDDNWSRIVSELLSRAGITVNGPAPSDIQVKHPDFFKRVLQEGSLGLGESFMDGWWECERLDVFFNNVLRAGLDRQLPHHLRDTLRIASARLFNLQSKKRAWIVGKEHYDLGNDLFTRMLDPLMQYSCAYWKDASTLEEAQLAKLHLICEKLQLQPGMRVLDIGCGWGGLAYYMAKNYGVSVVGVTISAEQQKMAQDRCEGLDVTILLQDYRDLDDQFDRIVSVGMFEHVGPKNYDTYFAVTDRNLKPDGVFLLHTIGSKKTDHTVDPWINKYIFPNGCLPSVRQIAKASEPHYVMEDWHNFGADYDTTLMAWHARFQASWPDIADNYSDRFRRMFSYYLNACAGAFRARDIQLWQIVFSRGVEHGLRVPR
>NZ_CP023529.1|WP_059178130.1|866807_868007_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPNNGFLVWLGGLSVLGFLATDMYLPAFAAMQEDLQTPAAAISASLSLFLAGFAFAQLLWGPLSDRYGCKPILLLGLTIFALGCLGMLWVRDATWLLVLRFVQAFGVCAAAVTWQALVTDYYPASRVNRIFATIMPLVGLSPALAPLLGSWILVHFDWQAIFATLFIITLALMLPAFALKPAQAKPVGNNATRVTFMSLLRSRAYRGNVLIYAACSASFFAWLTGSPFILHDMGYTPAVIGLSYVPQTIAFLVGGYGCRAALQKWQGQQMLPWLLVLYALSVIGTWAVGFIPNVGLAEILIPFCVMAVANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLSSLIVSALIATPLMTTTSVMLVTVALAALGYRMQVSATENMQDGTAVESSQA
>NZ_CP023529.1|WP_059178129.1|868119_869031_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSGAAQELHRVPSAVSYTVRQMEEWLAVPLFERRHRDVVLTPAGVWFLKEGRSVIKKMMITREQCQQIANGWRGHLSIAVDNIVKPERTRQMVVDFYRHFSDVELRVSQEVFNGVWDALSDGRVEMAIGATQAIPVGGRYAFRDMGTLSWRCVVASDHPLATIEGPLSDDVLRNWPSLVMEDTSRSLPKRITWLLDNQRRVVAPDWESSATCLSAGLCVGMVPVHFARPRIDRGEWVALELENPFPVAACCLTWQQNDMSPALAWLLDYLGDSETLNREWLREPE
>NZ_CP023529.1|WP_012017183.1|869049_870075_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNSQEKQRAYLSMMAQKRVDGLLVMCSEYPESVLSMLEEYRHIPMVVMDWGDTRADFTDSVNDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEALITVPENWIVQGDFEPESGYRAMQQIVSQSHRPTAVFCGGDIMAMGALCAADELGLRVPQDISVIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLMDRIVSKREESQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP023529.1|WP_040075924.1|870371_870461_+|YnhF-family-membrane-protein
MNTDLKFSLTTTIIVLGLIVAASFTAILH
>NZ_CP023529.1|WP_059178128.1|870624_871791_+|MFS-transporter
MKINFPLLALAIGAFGIGTTEFSPMGLLPVIAKGVDVSIPAAGMLISAYAIGVMIGAPLMTLLLSHRARRNALIFLMAIFTLGNVLSALSPDYTTLLLSRILTSLNHGAFFGLGSVVAASVVPKHRQASAVATMFMGLTIANIGGVPAATWLGEVIGWRMSFLATAMLGVVAMIALFFSLPKGGAGERPDVRKELSVLLRPQVLSALLTTVLGAGAMFTLYTYISPVLHDITHATPFFVTAMLVLIGVGFTLGNYLGGKLADRSVSGTLKGFLTLLIVIMVAIPWLARNEFGAAIAMVVWGAATFAVVPPLQMRVMRVAHEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIIAGLGLLLVLLSGRQQPQPACAAE
>NZ_CP023529.1|WP_059178127.1|871829_872411_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALVPHISVETLEYHYGKHHQTYVTNLNNLIKDTAFEGKTLEEIVRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGELATAVNKAFGSFAEFKAKFTDAAVKNFGAGWTWLVKEADGKLAIVSTSNAGTPLTTAATPLMTVDVWEHAYYIDYRNARPNYLEHFWALVNWEFVAKNFAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023529_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_4

2434184-2434295

Orphan

Consensus_repeat	Method
GGGTGATTCTCTCTCCCCTTGGGAGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023529_4

>merge|NZ_CP023529|4|2434184-2434295|CRISPRCasFinder
GGGTGATTCTCTCTCCCCTTGGGAGACGAGAAAAGACTGCTTCGTGCCAGTCTTTCCCCCAGTGGGAGAAGCGAAAAGAGAGTTCAGGGTGATTCCCTCTCCCCTTGGGAGA

>NZ_CP023529|4|4|2434184-2434295|CRISPRCasFinder
GGGTGATTCTCTCTCCCCTTGGGAGA	CGAGAAAAGACTGCTTC
GTGCCAGTCTTTCCCCCAGTGGGAGA	AGCGAAAAGAGAGTTCA
GGGTGATTCCCTCTCCCCTTGGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059177672.1\|2440065_2440776_-\|N-acetylmannosamine-6-phosphate-2-epimerase	unknown	unknown	gnl\|CDD\|234907
NZ_CP023529.1\|WP_096759542.1\|2438942_2439308_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP023529.1\|WP_015960227.1\|2444754_2446392_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP023529.1\|WP_059177681.1\|2426615_2427665_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP023529.1\|WP_059177673.1\|2439340_2440012_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP023529.1\|WP_059177680.1\|2427661_2428141_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP023529.1\|WP_059177674.1\|2436775_2438581_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP023529.1\|WP_059177677.1\|2430328_2431756_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP023529.1\|WP_059177671.1\|2440772_2442329_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273923
NZ_CP023529.1\|WP_059177675.1\|2434315_2435050_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP023529.1\|WP_059177669.1\|2443376_2444672_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP023529.1\|WP_059177676.1\|2433036_2434080_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP023529.1\|WP_059177678.1\|2429723_2430329_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP023529.1\|WP_059177682.1\|2425873_2426635_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP023529.1\|WP_059177679.1\|2428140_2428851_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP023529.1\|WP_015960213.1\|2429348_2429672_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP023529.1\|WP_015960216.1\|2431765_2432674_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP023529.1\|WP_059177670.1\|2442495_2443320_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP023529.1\|WP_015960212.1\|2428870_2429182_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP023529.1\|WP_015960219.1\|2435063_2436776_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059177672.1\|2440065_2440776_-\|N-acetylmannosamine-6-phosphate-2-epimerase	gnl\|CDD\|234907	PRK01130, PRK01130, putative N-acetylmannosamine-6-phosphate 2-epimerase.	1.25375e-130
NZ_CP023529.1\|WP_096759542.1\|2438942_2439308_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.07002e-55
NZ_CP023529.1\|WP_015960227.1\|2444754_2446392_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP023529.1\|WP_059177681.1\|2426615_2427665_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP023529.1\|WP_059177673.1\|2439340_2440012_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.42357e-150
NZ_CP023529.1\|WP_059177680.1\|2427661_2428141_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	5.31018e-101
NZ_CP023529.1\|WP_059177674.1\|2436775_2438581_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP023529.1\|WP_059177677.1\|2430328_2431756_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP023529.1\|WP_059177671.1\|2440772_2442329_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273923	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	4.01129e-179
NZ_CP023529.1\|WP_059177675.1\|2434315_2435050_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.06938e-137
NZ_CP023529.1\|WP_059177669.1\|2443376_2444672_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP023529.1\|WP_059177676.1\|2433036_2434080_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP023529.1\|WP_059177678.1\|2429723_2430329_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	9.95847e-149
NZ_CP023529.1\|WP_059177682.1\|2425873_2426635_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	8.55772e-147
NZ_CP023529.1\|WP_059177679.1\|2428140_2428851_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.27441e-117
NZ_CP023529.1\|WP_015960213.1\|2429348_2429672_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	6.81172e-47
NZ_CP023529.1\|WP_015960216.1\|2431765_2432674_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP023529.1\|WP_059177670.1\|2442495_2443320_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.90021e-69
NZ_CP023529.1\|WP_015960212.1\|2428870_2429182_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	4.29664e-62
NZ_CP023529.1\|WP_015960219.1\|2435063_2436776_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>NZ_CP023529.1|WP_059177676.1|2433036_2434080_+|aminopeptidase
MFSAMRHRIAALAFGVCFILPAHATANSFGEIASTQARHIATVFPGRMTGTPAEMLSADYLRQQFADMGYQSDIRAFHSRYIYTSRNNSKNWHNVTGSTVIAAHEGKTAQQIIIMAHLDTFAPMSDEDTDHNLGGLTLQGMDDNAAGLGVMLELAERLKNIPTHYGIRFVATSGEEEGKLGAENLLNRMSAAEKKNTLLVINLDNLIVGDKLYFNSGKTTPNSVRKLTRDRALAIARGQGIQAAINPGRNPNYPKGTGCCTDGETFDKAGIPVLYVEATNWSLGKKDGYQQRAKSKAFPDGTSWHDVRLDNQQYIDASLPQRIERRTRDVVKVMLPLVKELAKAGKG
>NZ_CP023529.1|WP_015960216.1|2431765_2432674_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSGKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTELDIWQYIYLENIDIVPLYLAAERPVLERDGMLMMIDDDRIDLQPGEEIKNQMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP023529.1|WP_059177677.1|2430328_2431756_-|sulfate-adenylyltransferase-subunit-CysN
MNNTIAQQIADEGGVEAYLHAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLMDARKGVLDQTRRHSFISTLLGIKHLVVAVNKMDLVNFSEEAFEAIRQSYLTFAEQLPGHLDIRFVPLSALEGDNVASQSANMPWYSGPTLLEVLETVEIQRVVENQPMRFPVQYVNRPNLDFRGFSGTIASGTVKVGQRVKVLPSGVESAITRIVTFDGDLQEAGAGEAVTLVLKDEIDISRGDLLLDAEESVPAVQSASLDVVWMAEQPLTAGQSYDVKIAGKKTRARVDGIQYQVDINSLAQHKADELPLNGIGLVDFTFDEPLVLDKYQHNPVTGGLIFIDRLTNVTVGAGLVNEPHLQANATPSEFSAFELELNALVRKHFPHWGARDLLGGK
>NZ_CP023529.1|WP_059177678.1|2429723_2430329_-|adenylyl-sulfate-kinase
MAEHDENVVWHPHPVTVAQREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHAGVSTYLLDGDNVRHGLCSDLGFSDDDRKENIRRVGEVASLMADAGLVVLTAFISPHRAERQMVRERVGENRFVEVFVDTPLAICETRDPKGLYKKARAGELKNFTGIDAVYEAPESPEIHLDGQQLVTNLVSQLLDLLRQDDIIRS
>NZ_CP023529.1|WP_015960213.1|2429348_2429672_-|DUF3561-family-protein
MRNSQNYIISGSETLSTNDETTWSLPGAVVGFVSWLLALGIPFLIYGRNTLFFFLYTWPFFLALMPVAVVVGIALHSLLNGKLLYTTLITIVAVVAIFGLLFLWLMG
>NZ_CP023529.1|WP_015960212.1|2428870_2429182_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGLHDYGRVNDDVTAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPDETFYRLVPDASKRNQGSAQNNR
>NZ_CP023529.1|WP_059177679.1|2428140_2428851_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAVTFSDVCAVVPAAGFGRRMQTECPKQYLSIGDKTILEHTVAALLANPRVTRVVIAISPGDARFAALPLANHPQITVVDGGTERADSVLAGIRAAGNAAWVLVHDAARPCLHPDDLARLLAISETSAVGGILAAPVRDTMKRAEPGLNHIAHTVERVDLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPELVEGRADNIKVTRPEDLQLAEFYLTRMTYQENA
>NZ_CP023529.1|WP_059177680.1|2427661_2428141_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGVGPIIIGGVRIPFEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLTHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLVKAAK
>NZ_CP023529.1|WP_059177681.1|2426615_2427665_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFENLTYLHGKPQGAGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSQFELEGCKVLEYARHKRKLRLGALQGNAFTLILREVTDRDDVEKRLTAIAEQGVPNYFGAQRFGIGGSNLLGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDANQVVVGDALQLAGRGSWFVATAEEITDVQARVDNKTLMITAAMPGSGEWGTQGDALAAEQAAIADAPELQSLLMREKVEAARRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
>NZ_CP023529.1|WP_059177682.1|2425873_2426635_-|5'/3'-nucleotidase-SurE
MRILLSNDDGIHAPGIQTLAKYLREFADVQVVAPDRNRSGASNSLTLESSLRTFAFENGDIAVQMGTPTDCVFLGVNALMRPGPDVVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGHQHYDTAAAVTCSILRALSREPLRTGRILNINVPDLPLDEIKGIRVTRCGSRHPADQVIPQQDPRGNTLYWIGPPGDKCDAGPDTDFAAVDEGYVSVTPLHVDLTAYNAQDVVSGWLERAGVNTQW
>NZ_CP023529.1|WP_059177675.1|2434315_2435050_-|phosphoadenosine-phosphosulfate-reductase
MSLLDLNALNDLPKVERILALAETNAKLEKLDAEGRVAWALENLPGEYALSSSFGIQAAVSLHLVNTIRPDIPVILTDTGYLFPETYQFIDELAEKLKLNLKVYRADQSAAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALEELNVKTWFAGLRREQSGSRASLPVLGIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP023529.1|WP_015960219.1|2435063_2436776_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKVDSNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAHDNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDVEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYIPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGITFEPIRAYEFTGRGDRIGWVKGIDNKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGEFRITANQNLIIAGVPESQKAKIEKLAREHTLMDGVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAVLAKHGIPDEHIVMRVTGCPNGCGRALLAELGLVGKAPGRYNVHLGGNRSGTRIPRMYRENITEPEILDSLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP023529.1|WP_059177674.1|2436775_2438581_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQAPPSNLLPLNPEQLARLQAATTDFSPTQLAWVSGYFWGMLNQQPGAVVNAPAAAVEIPAITVISASQTGNARRVAEALRDDLLAAKLNVNLVNAGDYKFKQIASEKLVVVVASTQGEGEPAEEAVALHKFLFSKKAPKLDGTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGAERLLDRVDADVEYQAAAAEWRARIVDVLKARVPKDTPAQAAISASGAVNEVSTSPYTKEVPLVASLSVNQKITGRDSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLSEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDVDALVGLLRPLTPRLYSIASSQAEVESEVHITVGAVRFDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQNQKIYVQDKLREQGAELWAWINNGAHLYVCGDANRMAKDVEQALLEVIAEFGGMDIESADEFLSELRVERRYQRDVY
>NZ_CP023529.1|WP_096759542.1|2438942_2439308_+|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFIFEAAHHLPHVPQGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFSELKAAFKPTYDRLDHYYLNDIPGLENPTSEVLAKWIWDQMKPRVPLLSSVMIKETCTAGCVYRGE
>NZ_CP023529.1|WP_059177673.1|2439340_2440012_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLADREVSLFSILAKTKESDKWGAGSAEDLLAIIGRQGWTARHVVITGGEPCIHDLMSLTDLLEKNGYSCQIETSGTHEVRCSHTTWVTVSPKVNMRGGYDVLSQALERADEIKHPVGRVRDIEALDELLATLTDEKQRIIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP023529.1|WP_059177672.1|2440065_2440776_-|N-acetylmannosamine-6-phosphate-2-epimerase
MKKTVLDVLKGKLIVSCQALENEPLHSPFIMSRMALAAAQGGAVAIRANSVVDIAAIKQQVSLPVIGIIKRDYPGSEVFITATLKEIDELMTVNPEIIALDATARPRPDGETLESLVGKIRSRYPSVLLMADIATLAEAKTAQALGFDCVGTTLYGYTAETQGHSLPENDCEFLRDVVAAVSIPVVAEGNVDTPERAARCLALGAHTVVVGGAITRPQQITTRFVAAIEAHSTDRA
>NZ_CP023529.1|WP_059177671.1|2440772_2442329_-|PTS-transporter-subunit-EIIC
MMQMFSGASSGVWFEKAQRFGKSFMLPIAVLPAAGLLLGIGGALSNPNTLTAYPFLDIGWLQAIFTIMSSAGSIVFANLSVLFAVGVAVGLAKTDKGTAGLAALLAFLVMNATINALLILTGKLALENPGAVGQGMTLGIQTLETGVFGGVVIGLVTCTLHHRFNKIALPQFLGFFGGSRFVPIISSLAAIVVGAAMTVVWPHFQKLIFGLGGLVDATGYLGTLLYGFILRMLGPFGLHHIFYLPFWTTALGGSEIVNGHLVEGTQRIFFAQLADPNTQQFYLGTSRFMSGRFITMMFGLIGACLAMYHTAKPENKKRVAGLLISAALTSFLTGITEPIEFSFLFVAPVLYVIHALFDGLAFMLAHILHITIGQTFSGGFIDFILFGVLQGEAKTNWMYVPLVGVPWFFLYYFTFRFMITRFGYATPGREKEAVVESTLPQSERAAAVIAGLGGKDNLDEVDCCATRLRVTVKDGGKVNEAALKATGARGVIVRGNGVQVIYGPHVTIIKNEVEEILS
>NZ_CP023529.1|WP_059177670.1|2442495_2443320_+|MurR/RpiR-family-transcriptional-regulator
MSENENLLLRLRQGVSGYSPTQQKLGSFILNDPSKVLYLTITELARESDTSEASVTRLCRTLGCKGYTEFKMALALDVKREHVPVKKGDEIDEIVEESILALQDTSRLLDREILLKAAQALHQSRSIYIYGVAASAIIGDYLHYKLLRLGKSAQLFSDMHRASMNATTLTSDDLVVAISSSGSTRDLLHVVKLARKRGAQVLALSNTPRSPLTSLSDILLVAAKPEGPLSAGALNAKVGVMLLVELLAMTLISLDDRYGDASQQTASATLPLLL
>NZ_CP023529.1|WP_059177669.1|2443376_2444672_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFMGKGVLKAVGAVNGPIAQAVIGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLATAKAAAASKGQALFEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKSLKEAVRMGSEVFHNLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGTDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEDLTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIVNSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQ
>NZ_CP023529.1|WP_015960227.1|2444754_2446392_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTMMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERIVAGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYMAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVAEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNVPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARFARENNIPYLGICLGMQVALIEFARNVVGMENANSTEFVPDCKYPVVALITEWRDEDGNVEVRTEKSDLGGTMRLGAQACQVSEDSLVRKMYGSTTITERHRHRYEVNNMLLKQIEAAGLRIAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEYQKRQAK

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Crispr_ID: NZ_CP023529_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_5

2788183-2788306

Orphan

Consensus_repeat	Method
AGTCACCGTTTTTAGTCTTTGCTCCCTCTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_5

>merge|NZ_CP023529|5|2788183-2788306|CRISPRCasFinder
AGTCACCGTTTTTAGTCTTTGCTCCCTCTCCCCATGGGAGAGGATCGAGTTGAAGGCATCAGGCTGCAGGCTGTAAAAAAAACGGTAACCGTAGTCACCGTTTTTAATCTTTGCTCCCTCTCCC

>NZ_CP023529|5|5|2788183-2788306|CRISPRCasFinder
AGTCACCGTTTTTAGTCTTTGCTCCCTCTCCC	CATGGGAGAGGATCGAGTTGAAGGCATCAGGCTGCAGGCTGTAAAAAAAACGGTAACCGT
AGTCACCGTTTTTAATCTTTGCTCCCTCTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059177403.1\|2794363_2795851_-\|altronate-dehydratase	unknown	unknown	gnl\|CDD\|377287
NZ_CP023529.1\|WP_059177412.1\|2780481_2781513_-\|autoinducer-2-ABC-transporter-permease-LsrC	unknown	unknown	gnl\|CDD\|185330
NZ_CP023529.1\|WP_015960532.1\|2799182_2799959_+\|transcriptional-regulator-ExuR	unknown	unknown	gnl\|CDD\|183176
NZ_CP023529.1\|WP_059177416.1\|2777309_2777603_-\|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase	unknown	unknown	gnl\|CDD\|182494
NZ_CP023529.1\|WP_059177409.1\|2784216_2785809_+\|autoinducer-2-kinase	unknown	unknown	gnl\|CDD\|182853
NZ_CP023529.1\|WP_059177410.1\|2783212_2784184_+\|transcriptional-regulator-LsrR	unknown	unknown	gnl\|CDD\|237962
NZ_CP023529.1\|WP_015960527.1\|2791750_2792719_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274743
NZ_CP023529.1\|WP_059177404.1\|2793003_2794245_+\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_CP023529.1\|WP_059177413.1\|2779497_2780481_-\|autoinducer-2-import-system-permease-LsrD	unknown	unknown	gnl\|CDD\|184998
NZ_CP023529.1\|WP_059177405.1\|2790333_2791332_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP023529.1\|WP_059177411.1\|2781509_2782997_-\|autoinducer-2-ABC-transporter-ATP-binding-protein-LsrA	unknown	unknown	gnl\|CDD\|185336
NZ_CP023529.1\|WP_059177415.1\|2777599_2778487_-\|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase	unknown	unknown	gnl\|CDD\|181306
NZ_CP023529.1\|WP_059177406.1\|2789573_2790074_+\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|224368
NZ_CP023529.1\|WP_059177408.1\|2786117_2788139_+\|NADPH-dependent-2,4-dienoyl-CoA-reductase	unknown	unknown	gnl\|CDD\|239240
NZ_CP023529.1\|WP_059177401.1\|2800307_2800970_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP023529.1\|WP_059177407.1\|2788353_2789490_-\|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG	unknown	unknown	gnl\|CDD\|184963
NZ_CP023529.1\|WP_059177402.1\|2795868_2797281_-\|glucuronate-isomerase	unknown	unknown	gnl\|CDD\|376859
NZ_CP023529.1\|WP_059177414.1\|2778499_2779501_-\|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB	unknown	unknown	gnl\|CDD\|237961
NZ_CP023529.1\|WP_041689534.1\|2797755_2799054_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_CP023529.1\|WP_059177417.1\|2776585_2777272_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059177403.1\|2794363_2795851_-\|altronate-dehydratase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	0
NZ_CP023529.1\|WP_059177412.1\|2780481_2781513_-\|autoinducer-2-ABC-transporter-permease-LsrC	gnl\|CDD\|185330	PRK15432, PRK15432, autoinducer 2 ABC transporter permease LsrC; Provisional.	0
NZ_CP023529.1\|WP_015960532.1\|2799182_2799959_+\|transcriptional-regulator-ExuR	gnl\|CDD\|183176	PRK11523, PRK11523, transcriptional regulator ExuR.	0
NZ_CP023529.1\|WP_059177416.1\|2777309_2777603_-\|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase	gnl\|CDD\|182494	PRK10486, PRK10486, (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase.	1.17153e-61
NZ_CP023529.1\|WP_059177409.1\|2784216_2785809_+\|autoinducer-2-kinase	gnl\|CDD\|182853	PRK10939, PRK10939, autoinducer-2 (AI-2) kinase; Provisional.	0
NZ_CP023529.1\|WP_059177410.1\|2783212_2784184_+\|transcriptional-regulator-LsrR	gnl\|CDD\|237962	PRK15418, PRK15418, transcriptional regulator LsrR; Provisional.	0
NZ_CP023529.1\|WP_015960527.1\|2791750_2792719_+\|TerC-family-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	8.91075e-141
NZ_CP023529.1\|WP_059177404.1\|2793003_2794245_+\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_CP023529.1\|WP_059177413.1\|2779497_2780481_-\|autoinducer-2-import-system-permease-LsrD	gnl\|CDD\|184998	PRK15038, PRK15038, autoinducer 2 ABC transporter permease LsrD.	7.12411e-150
NZ_CP023529.1\|WP_059177405.1\|2790333_2791332_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.69992e-61
NZ_CP023529.1\|WP_059177411.1\|2781509_2782997_-\|autoinducer-2-ABC-transporter-ATP-binding-protein-LsrA	gnl\|CDD\|185336	PRK15439, PRK15439, autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional.	0
NZ_CP023529.1\|WP_059177415.1\|2777599_2778487_-\|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase	gnl\|CDD\|181306	PRK08227, PRK08227, 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase.	0
NZ_CP023529.1\|WP_059177406.1\|2789573_2790074_+\|M48-family-metallopeptidase	gnl\|CDD\|224368	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only].	4.91819e-39
NZ_CP023529.1\|WP_059177408.1\|2786117_2788139_+\|NADPH-dependent-2,4-dienoyl-CoA-reductase	gnl\|CDD\|239240	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provides a hydrid ion to the C5 atom of substrate, and Tyr and His are proposed to form a catalytic dyad that protonates the C4 atom of the substrate and completes the reaction.	0
NZ_CP023529.1\|WP_059177401.1\|2800307_2800970_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.12236e-49
NZ_CP023529.1\|WP_059177407.1\|2788353_2789490_-\|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG	gnl\|CDD\|184963	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG.	0
NZ_CP023529.1\|WP_059177402.1\|2795868_2797281_-\|glucuronate-isomerase	gnl\|CDD\|376859	pfam02614, UxaC, Glucuronate isomerase. This is a family of Glucuronate isomerases also known as D-glucuronate isomerase, uronic isomerase, uronate isomerase, or uronic acid isomerase, EC:5.3.1.12. This enzyme catalyzes the reactions: D-glucuronate <=> D-fructuronate and D-galacturonate <=> D-tagaturonate. It is not however clear where the experimental evidence for this functional assignment came from and thus this family has no literature reference.	0
NZ_CP023529.1\|WP_059177414.1\|2778499_2779501_-\|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB	gnl\|CDD\|237961	PRK15408, PRK15408, autoinducer 2 ABC transporter substrate-binding protein LsrB.	0
NZ_CP023529.1\|WP_041689534.1\|2797755_2799054_+\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	6.79042e-122
NZ_CP023529.1\|WP_059177417.1\|2776585_2777272_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	4.15667e-79

>NZ_CP023529.1|WP_059177408.1|2786117_2788139_+|NADPH-dependent-2,4-dienoyl-CoA-reductase
MSRYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEHPEGAERLAAFYAERARHGVALIVTGGVAPALSGVGMEGGAVLNDVSQLPQHRIVTDAVHKEGGKIALQILHTGRYSYQPHLVAPSAIQAPINRFKPHALTHDEILALIDDFSRCAALAREAGYDGVEIMGSEGYLINEFLVARTNQRDDEWGGDYARRMRFAVDVVRAVRARVGTDFIIVFRLSMIDLVEGGGTFDETVQLAQAIEAAGATIINTGIGWHEARIPTIATAVPRAAFSWVTRKLKGKVSIPLVTTNRINDPQVADDVLANGDADMVSMARPFLADAELLSKAQSDRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPIVPAVKIKRLAVVGAGPAGLAFAVNAASRGHVVTLFDAAAEIGGQFNIAKQIPGKEEFYETLRYYRKMIALTGVDLRLNHFVTAPDLAGFDDVILASGIAPRTPEIEGIDHPKVLSYLDVLRDKVPVGEKVAIIGCGGIGFDTAMYLSQPGEATSQNIAEFCVEWGIDTSLNQSGGLRPEGPQLPKSPRQIVMLQRKASKPGEGLGKTTGWIHRTTLLSRGVKMIPAVSYQKIDDDGLHVTIGGEPQLLRVDQVILCAGQEPRRELADPLREAGIAVHLIGGCDVAMELDARRAIAQGTKLALAI
>NZ_CP023529.1|WP_059177409.1|2784216_2785809_+|autoinducer-2-kinase
MSYLLALDAGTGSVRAVVFDLHGNQISVGQAEWKHLSVENVPGSMEFDLDTNWRLACQCIHQALDRAHLNAADIQSVACCSMREGIVLYDRNGDAIWACANVDARASREVAELKEIHDNRFESEVYDVSGQTLALSAMPRLLWLAHHRPDIYRNAATITMISDWLAAKLSGELAVDPSNAGTTGMLDLFSRDWRPALLDMAGLRADILSPVKETGTVLGAVTKAAASQSGLREGTPVVMGGGDVQLGCLGLGVVRAGQTAVLGGTFWQQVVNLPEVRTDPDMNIRVNPHVIPGMAQAESISFFTGLTMRWFRDAFCAEEKLIAERMGMDAYALLEEMANRVPAGSHGVMPIFSDAMHFKQWYHAAPSFINLSIDPEKCNKATLFRALEENAAIVSACNLAQISRFSGVTFESLVFAGGGAKGALWSQILSDVTGLPVRVPDVKEATALGCAIAAGTGAGLYDDMAATGERLVKWSREFTPNPEHRELYDGMMQKWQAVYADQLGLVDSGLTTSMWQAPGLVRAPSPRSSH
>NZ_CP023529.1|WP_059177410.1|2783212_2784184_+|transcriptional-regulator-LsrR
MSDKRIAEESRFAGLALTEEELVARVAWCYYHDGLTQNDIGERLGLPRLKISRLLEKGRQSGVIRVQINSRYEGCLALETELQQRFGLKLVRVLPALNAVPMNVRLGIGAAQSLMGVLEPGQLLAVGFGETTMSCIQHLSGFISSQQVRLVTLSGGVGPYMTGIGQLDAACSVSMIPAPLRVSSAEVAGILKREASVRDVILAATAADAAVVGIGSVNQRRDATILRAGYISEGEQLMYARKGAVGDILGYFLNAAGERVSDLEIHHELLGVTLDELAQLPTIVGVAGGEEKADAIYAALKGRLINGLVTEETTARAVLALAG
>NZ_CP023529.1|WP_059177411.1|2781509_2782997_-|autoinducer-2-ABC-transporter-ATP-binding-protein-LsrA
MTVLIEAHGIHKQFSGVPVLRGIDFTLLSGQVHALMGGNGAGKSTLMKIIAGVETPDSGELTVEGKPFARLKPGLAHQLGIYLVPQEPMLFPNLTVRENILFRLPRGNDPEKRLADKLQQLQCQLNLDAAASTLEVADQQMVEILRGLMRDAKILILDEPTASLTPGETERLFRQIRALQALGVGIVFISHKLPEIRQLASHVSVMRDGAVVLSGETTQFDDTALITAMTPVSREQGLSDTQKLWLALPGNRRTQAQDFPVLRVEDLTGEGFIDLSLEIYAGEIVGLAGLVGSGRTEFAETLYGLRPTRGGRIWLENQDIGGDSVLTRLEKGLVYLPEDRQVSGLFLDAPIRWNTVALNEPSLWQQRKREAAVVERYHRALGIKLNHPDQIVRTLSGGNQQKVLLARCLEANPLLLIVDEPTRGVDVSARADIYQLIKSVAAQNVAVLMISSDLDEFPGLADRVLVMHQGMFSGELPRHAVSLDRMMALAFGGQS
>NZ_CP023529.1|WP_059177412.1|2780481_2781513_-|autoinducer-2-ABC-transporter-permease-LsrC
MKTLLKNRELSAFLAILALFGVLVALNPAYLSFQTLGMIFASSQILILLALGATLVMLTRNIDVSVGSTVGLCAIAVGVALNNGYSLPVSMLFALAIGALAGAFNGLLVVGLRIPAIVATLGTLGLYRGAMLLWTGGKWIEGLPSSLKSLSEPVALGVSPLGMAVLFLVLIGAWTLSRTVAGRDFYAVGDNLAAARQLGVAVNRTRMLAFTLNGMLAACAGIVFASQIGFVPNQTGSGLEMKAIAACVLGGISLLGGTGTLIGAFLGAFFLTQIDTVLVLFRLPAWWNDFIAGLVLLGVLVLDGRLRQALTRHQRALKYSRFQPGNKGGKHVTPFPKRKKEVA
>NZ_CP023529.1|WP_059177413.1|2779497_2780481_-|autoinducer-2-import-system-permease-LsrD
MKLNWETTLLILLVLEILLFGAINPRMLDINMLLFSTSDFICIGIVALPLTLVIISGGIDISLGSTIGLCAIALGVMMQFGLPMYFAVPLTLLLGLLCGLFNAALIHYTGISPLVITLGTLYLYGGGALLLSGLAGATGYEGIGGFPDSFTAFANLTVLGLPIPLVLFAVITFFFWLITHRGRFGRHLFLIGQNPRAARYAALSVNGMPYALYGLVGVASAIAALVMVSYFGSARSDLGRDLLMPALTAAVLGGANIYGGSGSVIGTALAALLVGYLQQGLQMVGIPNQVSSALSGALLVVVVMGRSLSLHREWVRNFFTKHTRSLR
>NZ_CP023529.1|WP_059177414.1|2778499_2779501_-|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB
MKTKLLVLAVALSVASAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGVDVTYDGPTEPSVSGQVQLINNFVNQGFNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSIYINQGTPEQLGGLLVDMASKQVTKPAAKVAFFYSSPTVTDQNQWVKEAKAKIEKDHPQWQVVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQATENLKREGVAIVGFSTPNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADHLLKKGDLNVGDSVDVKGIGVLKVEPNSVQGYQYEAKGNGIVLLPERVVFTKENIDKYDF
>NZ_CP023529.1|WP_059177415.1|2777599_2778487_-|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase
MADLDDIKDGKDFGIGTPQQNVPFTLKGCGALDWGMQSRLARIFNPTSNRTVMLAFDHGYFQGPTTGLERIDLSIAPLFAETDVLMCTRGILRSTVPPATNKPVVLRASGGNSILGELSNECVAVAMEDALRLNVCAVAAQVYIGSECEHQSINNIIKLVDAGNRYGIPTLAVTGVGKEMARDARYFSLASRIAAEMGAQIVKTYFVEEGFEKVAASCPVPIVIAGGKKLPEHEALEMCFRAIDQGASGVDMGRNIFQSSAPLAMLKAVKKVVHENMSAREAFQFWQEEKQGEGQ
>NZ_CP023529.1|WP_059177416.1|2777309_2777603_-|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase
MNVTLVEINIKPERVDEFLDVFRANHEGAIQEPGNLRFDVLQDPRVKTRFFIYEAYKNEEAVMAHKKTPHYLACVDKLEDLMSEPRKKRSFVGLMPE
>NZ_CP023529.1|WP_059177417.1|2776585_2777272_+|B3/4-domain-containing-protein
MSLVTPSIDPRLASIAAGFRALSIMVEAAPILHPDVAPAALARACQQVLNDDVAWASAHLTAWDDVFIAFGAKPKRTPCSANALRKRVLKEGELPSLDPIVDIYNAISVRYAIPVGGENFAAYSGVPRLTIADGSEPFDTLKEGQPIVEYPDSGEVIWRDDIGVTCRRWNWRQGVRTRLDSQAKTMWFILESLPAMPYEALQAAGEELISHLQQLMPGAVAHSEIIAL
>NZ_CP023529.1|WP_059177407.1|2788353_2789490_-|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG
MSHLDNGFRSLNLKRFPETDDVNPLQAWEAADEYLLQQLDDTEISGPVLVLNDTFGALACALAEHTPYSIGDSYLSELATRENLRHNEIAESSVKFLDSTAEYPQAPGVVLIKIPKTLALLEQQLRALRLVVTPQTRIIAGAKARDIHNSTLELFEKILGTTTTTLAWKKARLINCIFTEPALVDAQQMLSWKLEGTDWTIHNHANVFSRTGLDIGARFFLEHLPGNLEGEIVDLGCGNGVVGLTLLEKNPEASVLFTDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRTR
>NZ_CP023529.1|WP_059177406.1|2789573_2790074_+|M48-family-metallopeptidase
MNQLTYLQGYPENLLTQVRTLITEQKLGSVLEKRYPGTHDFATDKALWQYTQDMKNRYLKSAPPINKVMYDNKIHVLKNALGLHTSISRIQGGKLKAKAEIRVATVFRNAPEAFLRMIVVHELAHLKEKEHDKAFYSLCCHMEPQYHQLEFDTRLWLTHLSLKGCP
>NZ_CP023529.1|WP_059177405.1|2790333_2791332_+|Gfo/Idh/MocA-family-oxidoreductase
MIRFAVIGTNWITRQFVDAAHETGKYKLTAVYSRSLEQAQSFASDYPVEHLFTSLDDMAQSDAIDAVYIASPNALHSQQTLQFLAHKKHVICEKPLASNIQEVEAAIALARENQVVLFEAFKTASLPNFLLLQQSLPKLGKVRKAFINYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALWGEPHGVMATASLLDSGVDAHGVVVMDYGDFSVTLQHSKVSDSVLPSEIQGEAGSLVIEKISECQKVSFVPRGGKPQELTQPQHINTMLYEAEVFARLVENNEVNHPGLAVSRTTAKLQTEIRRQTGVVFPADGVSAEAIA
>NZ_CP023529.1|WP_015960527.1|2791750_2792719_+|TerC-family-protein
MHSVGTPMLWGGFAVVVVIMLAIDLFLQGRRGAHGMTMKQAAAWSLVWVTLSLLFCAAFWWYLASTEGRAVADPQALAFLTGYLIEKALAVDNVFVWLMLFSYFAVPAALQRRVLVYGVLGAIILRTIMIFAGSWLITQFEWLLYVFGAFLLFTGIKMALAKEDETGIGEKPLVKWIRGHLRMTDTIDNEHFFVRKNGLLFATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLSVILVFIGIKMLIVDFYHIPIAISLGIVFGILALTLVINAWVNHQNDKKQQAQ
>NZ_CP023529.1|WP_059177404.1|2793003_2794245_+|serine/threonine-transporter-SstT
MTMQSSGLLARIAQGSLVKQILVGLVLGILLALISKPAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALTAVVFSFLFPSTLHLSSAAGDITPPSGIVEVLRGLLMSMVSNPVNALLNANYIGILVWAVGLGFALRHGNETTKNLVNDVSNAVTFMVKIVIRFAPIGIFGLVSSTLATTGFETLWGYAQLLIVLIGCMLLVALVINPLLVFWQIRRNPYPLVLTCLRESGVYAFFTRSSAANIPVNMALAEKLNLDRDTYSVSIPLGATVNMAGAAITITVLTLAAVHTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGIPNEIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDARLAKNALRS
>NZ_CP023529.1|WP_059177403.1|2794363_2795851_-|altronate-dehydratase
MQYIKIHSLDNVGVALADLAEGTEVTFDTLSVTLRQAIGRGHKFALIPIAKGENVVKYGLPIGHALADIAPGEYIHSHNTRTNLSDLDEYSYQPDFQAEVGQAADRDVEIYRRASGEVGIRNELWILPTVGCVNGIARQIQTRFLKETHDAEGTDGVFLFSHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVDAFRETLGDFDPDRVHFMVCQHQDDEVEAGLEQLHQLYDVMRHDKREPGKLSELKFGLECGGSDGLSGITANPMLGQFSDYMISNGGTTVLTEVPEMFGAERILMSHCRDEETFEKTVTMVNDFKQYFIAHNQPIYENPSPGNKAGGITTLEEKSLGCTQKAGASQVVDVLRYGERLKTHGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLNEFIDTIVEFANGKQTCNEKNDFRELAIFKSGVTL
>NZ_CP023529.1|WP_059177402.1|2795868_2797281_-|glucuronate-isomerase
MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQVAENYRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDATDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPTTADEIWNQCGDLLAQDNFSARGIMKQMNVKMVGTTDDPIDSLEHHAIVAKDTSFDIKVLPSWRPDKAFNIEQATFSDYMAKLAEVSDTDIRRFTDLQSALTKRLDHFAAHGCKVSDHALDVVLFAESNEAELDSILARRLSGESLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGALRNNNQRQFKLLGADVGFDSINDRPLAEELSKLLSKQNEQNLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVAAGEAPADIQLLGEMVKNICFNNARDYFAIELN
>NZ_CP023529.1|WP_041689534.1|2797755_2799054_+|MFS-transporter
MRKIKGLRWYMIALVTLGTVLGYLTRNTIAAAAPTLMEELHISTQQYSYIIAAYSAAYTIMQPVAGYLLDVLGTKVGYAFFAVTWAIFCGATALAGSWGGLALARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQLAFIISGVLSFAWAMAWLIFYKHPRDQKKLSDEEREYIISGQESQHQTNNGKKMTPWQILGTRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCIVGGYLPPLFQRWFGVNLIVSRKMVVTMGALLMIGPGMIGLFTSPYVAIGLLCIGGFAHQSLSGALITLSSDVFGRNEVATANGLTGMAAWTASTMFALVVGALADTIGFSPLFAVLAIFDLMGAVVIWTVLKNQSAEELQNSSVGGPAAQS
>NZ_CP023529.1|WP_015960532.1|2799182_2799959_+|transcriptional-regulator-ExuR
MEITEPRRLYQQLAAELKSRIEQGVYLVGDKLPAERFIADEKSVSRTVVREAIIMLEVEGYVEVRKGSGIHVISNLPKHSPVPDESLEFASYGPFELLQARQLIESNIAEFAATQVTKQDIMKLMEIQDNARKEKCFRDSEWDLQFHVQVALATQNTALAAIVEKMWTQRVHNPYWKKLHDHIDLRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKLMLFNETSDDFEFNADRYLFADNPVVHLDTASSQAK
>NZ_CP023529.1|WP_059177401.1|2800307_2800970_+|DedA-family-protein
MELLTQLLNALWAQDFETLANPSMIGMLYFVLFMILFLENGLLPAAFLPGDSLLVLVGVLCAKGAMEFPQTVLLLTIAASLGCWVSYIQGRWLGNTRIVQNWLSHLPAHYHQRAHHLFHKHGLSALLIARFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTSLGYLLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLLGSLYVLLKKKYGARS

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Crispr_ID: NZ_CP023529_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_6

3113222-3113350

Orphan

Consensus_repeat	Method
GCAACGTGCGTTGCCTTTTGCTTTGAGCGGATGCGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_6

>merge|NZ_CP023529|6|3113222-3113350|CRISPRCasFinder
GCAACGTGCGTTGCCTTTTGCTTTGAGCGGATGCGGCCAGATGCCCTCACCCCGGCCCTCTCCCACGGGAGAGGGAGAACGCACTAAAAAAGCAACGTGCGTTGCTTTTTGCTTTGAGCGGATGCGGCC

>NZ_CP023529|6|6|3113222-3113350|CRISPRCasFinder
GCAACGTGCGTTGCCTTTTGCTTTGAGCGGATGCGGCC	AGATGCCCTCACCCCGGCCCTCTCCCACGGGAGAGGGAGAACGCACTAAAAAA
GCAACGTGCGTTGCTTTTTGCTTTGAGCGGATGCGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059180317.1\|3103658_3104696_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|182305
NZ_CP023529.1\|WP_059180319.1\|3105690_3107436_-\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|181992
NZ_CP023529.1\|WP_059180321.1\|3107964_3108714_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236524
NZ_CP023529.1\|WP_059180316.1\|3102839_3103535_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP023529.1\|WP_059180331.1\|3118703_3119087_+\|aspartate-1-decarboxylase-autocleavage-activator-PanM	unknown	unknown	gnl\|CDD\|380212
NZ_CP023529.1\|WP_059180324.1\|3110624_3111512_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA	unknown	unknown	gnl\|CDD\|182550
NZ_CP023529.1\|WP_059180325.1\|3111670_3112987_-\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB	unknown	unknown	gnl\|CDD\|182876
NZ_CP023529.1\|WP_059180327.1\|3114144_3114912_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivG	unknown	unknown	gnl\|CDD\|183080
NZ_CP023529.1\|WP_059180323.1\|3109782_3110628_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	unknown	unknown	gnl\|CDD\|182875
NZ_CP023529.1\|WP_072241959.1\|3119415_3120516_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|237959
NZ_CP023529.1\|WP_059180320.1\|3107558_3107984_+\|DUF2756-family-protein	unknown	unknown	gnl\|CDD\|182398
NZ_CP023529.1\|WP_059180333.1\|3120713_3121979_-\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|180690
NZ_CP023529.1\|WP_059180329.1\|3116182_3117109_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivH	unknown	unknown	gnl\|CDD\|182689
NZ_CP023529.1\|WP_059180334.1\|3122139_3122997_-\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP023529.1\|WP_059180328.1\|3114908_3116186_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM	unknown	unknown	gnl\|CDD\|236896
NZ_CP023529.1\|WP_059180322.1\|3108710_3109781_-\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP023529.1\|WP_059180318.1\|3105117_3105606_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|182263
NZ_CP023529.1\|WP_059180326.1\|3113429_3114143_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivF	unknown	unknown	gnl\|CDD\|183231
NZ_CP023529.1\|WP_059180335.1\|3123254_3124310_-\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|182910
NZ_CP023529.1\|WP_059180330.1\|3117170_3118280_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivK	unknown	unknown	gnl\|CDD\|237959

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059180317.1\|3103658_3104696_-\|oxidoreductase	gnl\|CDD\|182305	PRK10206, PRK10206, putative oxidoreductase; Provisional.	0
NZ_CP023529.1\|WP_059180319.1\|3105690_3107436_-\|gamma-glutamyltransferase	gnl\|CDD\|181992	PRK09615, ggt, gamma-glutamyltranspeptidase; Reviewed.	0
NZ_CP023529.1\|WP_059180321.1\|3107964_3108714_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236524	PRK09454, ugpQ, cytoplasmic glycerophosphodiester phosphodiesterase; Provisional.	1.24172e-167
NZ_CP023529.1\|WP_059180316.1\|3102839_3103535_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.43702e-83
NZ_CP023529.1\|WP_059180331.1\|3118703_3119087_+\|aspartate-1-decarboxylase-autocleavage-activator-PanM	gnl\|CDD\|380212	NF033213, matur_PanM, aspartate 1-decarboxylase autocleavage activator PanM. Members of this family, called PanM (or PanZ), although related to the GNAT family N-acetyltransferases, have a different function. Then enzyme PanD, aspartate 1-decarboxylase, has an active site modified Ser residue, created by cleavage of a precursor form. PanM promotes the maturation of the CoA biosynthesis enzyme PanD, but also inhibits its activity in the presence of CoA. Figure 6 in PMID:26276430 identifies residues considered critical to interaction with PanD; seed alignment sequences and cutoff scores were chosen to separate proposed PanM from functionally distinct relatives.	9.55798e-77
NZ_CP023529.1\|WP_059180324.1\|3110624_3111512_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA	gnl\|CDD\|182550	PRK10561, PRK10561, sn-glycerol-3-phosphate ABC transporter permease UgpA.	0
NZ_CP023529.1\|WP_059180325.1\|3111670_3112987_-\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB	gnl\|CDD\|182876	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB.	0
NZ_CP023529.1\|WP_059180327.1\|3114144_3114912_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivG	gnl\|CDD\|183080	PRK11300, livG, leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.	0
NZ_CP023529.1\|WP_059180323.1\|3109782_3110628_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	gnl\|CDD\|182875	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE.	1.17505e-180
NZ_CP023529.1\|WP_072241959.1\|3119415_3120516_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0
NZ_CP023529.1\|WP_059180320.1\|3107558_3107984_+\|DUF2756-family-protein	gnl\|CDD\|182398	PRK10350, PRK10350, DUF2756 family protein.	1.34711e-24
NZ_CP023529.1\|WP_059180333.1\|3120713_3121979_-\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|180690	PRK06777, PRK06777, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP023529.1\|WP_059180329.1\|3116182_3117109_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivH	gnl\|CDD\|182689	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH.	0
NZ_CP023529.1\|WP_059180334.1\|3122139_3122997_-\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP023529.1\|WP_059180328.1\|3114908_3116186_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM	gnl\|CDD\|236896	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional.	0
NZ_CP023529.1\|WP_059180322.1\|3108710_3109781_-\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP023529.1\|WP_059180318.1\|3105117_3105606_+\|N-acetyltransferase	gnl\|CDD\|182263	PRK10140, PRK10140, N-acetyltransferase.	2.869e-89
NZ_CP023529.1\|WP_059180326.1\|3113429_3114143_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivF	gnl\|CDD\|183231	PRK11614, livF, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF.	2.35856e-170
NZ_CP023529.1\|WP_059180335.1\|3123254_3124310_-\|cell-division-protein-FtsX	gnl\|CDD\|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	0
NZ_CP023529.1\|WP_059180330.1\|3117170_3118280_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivK	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0

>NZ_CP023529.1|WP_059180325.1|3111670_3112987_-|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB
MTSLRHTALGLAIGLAFATNAMAVTSIPFWHSMEGELGKEVDSLAQRFNDTHPDYKIVPVYKGNYEQSLSAGIAAFRTGNAPALLQVYEVGTATMMASKAIKPVYEVFKDAGINFDESQFVPTVSGYYTDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLNPDQPPKTWQDLADYTAKLKAAGMKCGYASGWQGWIQIENFSAWHGLPVATKNNGFDGTDAVLEFNKPEQVKHIALLEALNKKGDFSYFGRKDESTEKFYNGDCAITTASSGSLADIRHYAKFNYGVGMMPYDADVKGAPQNAIIGGASLWVMQGKDKGTYKGVAEFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADIATRQMMNKPPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDSAVERGNLLLRRFEQSTKS
>NZ_CP023529.1|WP_059180324.1|3110624_3111512_-|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA
MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSVQSVDPFGLSSQFVGLDNFAALWHDSYYIDSFWTTIKFSTMVTVSGLLASLFFAALVDYVVRGSRIYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLGEMGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFKLALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAGGPVQATTTLIYKIYREGFAGLDLSASAAQSVVLMLLVIVLTVVQFRYVESKVRYQ
>NZ_CP023529.1|WP_059180323.1|3109782_3110628_-|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE
MIENRPGLTIFSHTMLILGIIVILFPLYIAFVAATLDTKAVFETPMTLIPGGHLFENMATIWTQGVGANSAPFWLMMLNSFIMAFGITVGKIVVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELIEAARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIVQDVNLGTAVAGIKGMIATGEGTTLWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLVDSEK
>NZ_CP023529.1|WP_059180322.1|3108710_3109781_-|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC
MAGLKLQAVTKSWDSKTQVIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKGHIEERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQHLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNKGIAEQIGTPVEVYEKPASRFVASFIGSPAMNLLEGRISHAGTHFELESGMALPINWYYRGYAGRKMTLGIRPEHIALSSQADGGVPLVMDTLEMLGADNLAHGRWGDQKMVVRLAHQERPKAGSTLWLHLPENHLHLFDGETGQRV
>NZ_CP023529.1|WP_059180321.1|3107964_3108714_-|glycerophosphodiester-phosphodiesterase
MSHWPYPHIVAHRGGGKLAPENTLAAIDVGAHYGHRMIEFDAKLSQDGEIFLLHDDNLERTSNGWGVAGALPWRDLLKVDAGSWYSSEFKGEPLPLLAEVADRCRQHGMMANIEIKPTTGSGPLTGKVIALAAREMWDGMTAPLLSSFEIDALEAALAAAPELPRGLLLDEWRDDWQALTTRLACVSIHLNHRLLDEARVKMLKDAGLHILVYTVNKPQRAAELLRWGVDCICTDAIDVIGPDFNSAAD
>NZ_CP023529.1|WP_059180320.1|3107558_3107984_+|DUF2756-family-protein
MKRLLLITALLPFAALAQPQPLNTMNNPNQPGYVIPSQQRMQTEMMNQQQQQKGMLNQQLRTQTQLQQQHLQTQMNTNTQRIQQGQMREQPLPNANGGMLNSTPRPSSRTLLGGDSGGVAPQQQHMLPQRQNGELLSPPLN
>NZ_CP023529.1|WP_059180319.1|3105690_3107436_-|gamma-glutamyltransferase
MIKPTFLRWVAIAALMAGGTFTVAANPPAAPPVSYGVEEDVFHPVRAKQGMVASVDAMATQVGVDILKQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMMLRTKDGKTTAIDFREMAPNQASRDMFLDDQGNPDSKKSLTSHLATGTPGTVAGFSLALEKYGTLPLNKVVQPAITLARDGFVVNDALADDLETYGSEVIPNHENSKAIFWKDGEPLKKGDKLVQKNLAKSLELIAENGPDAFYKGAIADQIAEEMQKNGGLITKADLAEYKAIEREPIGGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMHKFGFGSADTMQVMAEAEKFAYADRSEYLGDPDFVKVPWQALTNKAYAKSLADQIDINKAKPSSQIRPGKLAPYESNQTTHFSVVDKDGNAVAVTYTLNTIFGTGIVAGNSGILLNNEMDDFSAKPGVPNVYGLVGGDANAVGPKKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDFGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEQRGQKIAVKEAMGSTQSIMVGPDGTLFGASDPRTVDDLTAGY
>NZ_CP023529.1|WP_059180318.1|3105117_3105606_+|N-acetyltransferase
MSEIVIRHAEPNDAAAIRQNYMHPGVYHDTLQLPHPSLEMWQERLVVKPGQRRLVACIDEKIVGDLSLQVEASPRRSHVASFGISVAADAQGRGVGSALMREMINLCDNWMRIERIELTVFSDNPAALALYRKYGFEIEGTGKKFALRNGEYVDAYYMARMK
>NZ_CP023529.1|WP_059180317.1|3103658_3104696_-|oxidoreductase
MTLHCAFIGFGKSTTRYHLPYVLNRKNSWHVAHIYRRSAKPEEQAPQYSHIHFTSDLDEVLGDPQVKLVIVCTHADSHFDYAKRALEAGKNVLVEKPFTPTMAEAKALFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYFRPIAETKPGLPQDGSFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDVKAIVKTSHLVKIDYPKFIVHGTRGSFIKYGIDQQETSLKANIMPGETGFAADDSLGVMEYVNADGVTVKEEIAAEIGDYGRVYDALFETITEGTPNYVKESDVLTNLEILERAFEQASPATVTLAK
>NZ_CP023529.1|WP_059180316.1|3102839_3103535_-|pirin-family-protein
MIFLRKANERGHANHGWLDSWHTFSFADYYDPNFMGFSALRVINDDVIDAGQGFGTHPHKDMEILTYVLEGAVAHKDSMGNEEQVPAGEFQIMSAGTGVRHSEYNPSKTEKLHLYQIWIIPEETGITPRYEQRRFDAEQGKQLVLSPDARDGSLKVHQDMELYRWALAKNEQSVHQIAAERRVWIQVVKGEVSINGTKATTADGLAIWDEQALSIHADSESEILLFDLPPV
>NZ_CP023529.1|WP_059180326.1|3113429_3114143_-|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivF
MEKAMLSFDKVSAHYGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFVERDQYQSRMKWVYELFPRLYERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRKEGMTIFLVEQNANQALKLADRGYVLENGRVVLEDTGDALLANEAVRSAYLGG
>NZ_CP023529.1|WP_059180327.1|3114144_3114912_-|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivG
MSQPLLTVNGLMMRFGGLLAVNNVSLDLHPKEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTIMLGDKHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGVFSGLLKTPAFRRAQAEALDRAATWLDRIGLLQHANRQASNLAYGDQRRLEIIRCMVTQPEILMLDEPAAGLNPKETKELDELIVELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPDEIRHNPDVIRAYLGEA
>NZ_CP023529.1|WP_059180328.1|3114908_3116186_-|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM
MKPMHFAMALLSAAMFFVLAGVFMGVQLELNGTKLVVDVASDIRWQWVFVGTAVVFLFQLLRPVFQKTLKNVSGPKFVLPAIDGSSVKQKLFLVALLVAAVAWPFMVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGVSQIPKPTFFGLEFSRTAREGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVMTLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNAQAKGEQA
>NZ_CP023529.1|WP_059180329.1|3116182_3117109_-|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivH
MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWLLVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWIVGASENFSASITTMQLVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSFALLIGVLLVMPTGILGRPEVEKV
>NZ_CP023529.1|WP_059180330.1|3117170_3118280_-|high-affinity-branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivK
MKRNAKAFIAGMVALAISQAAMAEEIKIAVVGAMSGPVAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCSSSTQPASDIYEDEGILMITPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILEKVKPQRIAIIHDKQQYGEGLARSVQENLKKGGANVVFFDGITAGEKDFSALLARLQKENIDFVYYGGYYPEMGQMLRQARATGLKTQFMGPEGVGNASLSNIAGNAGEGMLVTMPKRYDQEPSNKAIVDALNAQKKDPSGPYVWITYAAVQSLATALERTGSKAPLDLIKDLKAHGANTVIGPLNWDEKGDLKGFEFGVFQWHADGSSTVAK
>NZ_CP023529.1|WP_059180331.1|3118703_3119087_+|aspartate-1-decarboxylase-autocleavage-activator-PanM
MKLTILRLVSFSDQDLIDLGKIWPEYSPSSLAVDEHHRIYAARFNERLLGAVRVTLSGTRGALDSLRVRDVTRRRGVGQYLVEEVIRHHPDVTSWWMADVGVEDRNTMAAFMQALGFVDVEMGWEKR
>NZ_CP023529.1|WP_072241959.1|3119415_3120516_-|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MNMKGKALLAGCIALAFSTMAQADIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGEKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYKMVMRTTGLDSDQGPTAAKYIVENVKPKRIAIIHDKQQYGEGLARSVQDNLKKANANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTHFMGPEGVANVSLSNIAGESAEGMLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSADPAEIAKYLKANSVETVMGPLSWDEKGDLKGFEFGVFTWHADGTATDAK
>NZ_CP023529.1|WP_059180333.1|3120713_3121979_-|4-aminobutyrate--2-oxoglutarate-transaminase
MKNNELNDRRLQATPRGVGVMCGFYADKAENATLWDVEGNEVIDFAAGIAVLNTGHRHPKVIAAIENQLQSFTHTAWQIVPYESYIALAERINARVPIDGPAKTAFFSTGAEAVENAVKIARAYTKRPGLITFGGAFHGRTFMTMALTGKVAPYKLGFGPFPGSVYHAQYPNMLHGVSSQEALKSVERIFKADIAPDQVAAIILEPVQGEGGFNVAPADFMQGLRALCDTHGILLIADEVQSGFARTGKLFSMEHHCVKPDLITMAKSLAGGMPLSAVSGRADVMDAPAPGGLGGTYAGNPLAIAAALAVLDVIDEEDLCTRAAHLGHHLVEVLNKAKSDCPFIADIRAQGSMVAVEFNDPQTGQPSPEFTREVQNRALQEGLLLLSCGVYGNVIRFLYPLTIPEAQFRKALDIISASLTR
>NZ_CP023529.1|WP_059180334.1|3122139_3122997_-|RNA-polymerase-sigma-factor-RpoH
MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKTLILSHLRFVVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDDAQDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAANKLTHAMEGLDERSQAIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>NZ_CP023529.1|WP_059180335.1|3123254_3124310_-|cell-division-protein-FtsX
MNKRDAINQIRQFGNRFDRFRPSQGGGDGNRNAPKRAKSSPKPQSRKTNVFNEQVRYAFQGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAASQYYPSPQITVYLDKALDDNAAAQVVGQLQSEQGVEKVNYLSRDEALGEFRNWSGFGGALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRISQVKGIDEVRMDDSWFARLASLTGLVGRVAAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLGFSGAFLSLILSEILVMRLSSAVTEVAQVFGTKFDISGLGFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPQ

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Crispr_ID: NZ_CP023529_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_7

3131041-3131176

Orphan

Consensus_repeat	Method
GGGAGAGGGAGAAATGACTCACACGGCAACCGACGTTGCCGTTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_7

>merge|NZ_CP023529|7|3131041-3131176|CRISPRCasFinder
GGGAGAGGGAGAAATGACTCACACGGCAACCGACGTTGCCGTTTTTTACCTTGTGCAGTCTGATGCCCTCACCCCAACCCTTTCCCACAGGGAGAGGGAGAAATGACTCAAACGGCAACCGACGTTGCCGTTTTTT

>NZ_CP023529|7|7|3131041-3131176|CRISPRCasFinder
GGGAGAGGGAGAAATGACTCACACGGCAACCGACGTTGCCGTTTTTT	ACCTTGTGCAGTCTGATGCCCTCACCCCAACCCTTTCCCACA
GGGAGAGGGAGAAATGACTCAAACGGCAACCGACGTTGCCGTTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059180339.1\|3127626_3127986_-\|DUF2500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378475
NZ_CP023529.1\|WP_059180349.1\|3138591_3139173_+\|4'-phosphopantetheinyl-transferase-AcpT	unknown	unknown	gnl\|CDD\|182399
NZ_CP023529.1\|WP_059180405.1\|3134145_3134391_-\|sulfurtransferase-TusA	unknown	unknown	gnl\|CDD\|178967
NZ_CP023529.1\|WP_059180336.1\|3124970_3126506_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP023529.1\|WP_015960827.1\|3124302_3124968_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|182829
NZ_CP023529.1\|WP_059180346.1\|3135350_3135908_+\|DcrB-family-lipoprotein	unknown	unknown	gnl\|CDD\|183232
NZ_CP023529.1\|WP_059180348.1\|3137274_3138324_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|183405
NZ_CP023529.1\|WP_059180342.1\|3131183_3132470_-\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP023529.1\|WP_059180344.1\|3133015_3133999_-\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270389
NZ_CP023529.1\|WP_059180340.1\|3128115_3128742_+\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|226237
NZ_CP023529.1\|WP_059180341.1\|3128817_3131004_+\|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA	unknown	unknown	gnl\|CDD\|236827
NZ_CP023529.1\|WP_059180337.1\|3126644_3127244_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	unknown	unknown	gnl\|CDD\|236793
NZ_CP023529.1\|WP_059180343.1\|3132480_3132990_-\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP023529.1\|WP_059180333.1\|3120713_3121979_-\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|180690
NZ_CP023529.1\|WP_059180345.1\|3134612_3135278_+\|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter	unknown	unknown	gnl\|CDD\|183041
NZ_CP023529.1\|WP_059180335.1\|3123254_3124310_-\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|182910
NZ_CP023529.1\|WP_059180334.1\|3122139_3122997_-\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP023529.1\|WP_059180350.1\|3139241_3140036_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
NZ_CP023529.1\|WP_059180338.1\|3127227_3127509_+\|DUF1145-family-protein	unknown	unknown	gnl\|CDD\|182831
NZ_CP023529.1\|WP_059180347.1\|3135900_3137130_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|235348

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059180339.1\|3127626_3127986_-\|DUF2500-domain-containing-protein	gnl\|CDD\|378475	pfam10694, DUF2500, Protein of unknown function (DUF2500). The members of this family are largely confined to the Gammaproteobacteria. The function is not known.	2.04833e-30
NZ_CP023529.1\|WP_059180349.1\|3138591_3139173_+\|4'-phosphopantetheinyl-transferase-AcpT	gnl\|CDD\|182399	PRK10351, PRK10351, 4'-phosphopantetheinyl transferase AcpT.	4.43301e-113
NZ_CP023529.1\|WP_059180405.1\|3134145_3134391_-\|sulfurtransferase-TusA	gnl\|CDD\|178967	PRK00299, PRK00299, sulfurtransferase TusA.	9.71574e-54
NZ_CP023529.1\|WP_059180336.1\|3124970_3126506_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP023529.1\|WP_015960827.1\|3124302_3124968_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|182829	PRK10908, PRK10908, cell division ATP-binding protein FtsE.	1.12386e-159
NZ_CP023529.1\|WP_059180346.1\|3135350_3135908_+\|DcrB-family-lipoprotein	gnl\|CDD\|183232	PRK11615, PRK11615, hypothetical protein; Provisional.	1.11566e-114
NZ_CP023529.1\|WP_059180348.1\|3137274_3138324_+\|AI-2E-family-transporter	gnl\|CDD\|183405	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed.	1.12309e-107
NZ_CP023529.1\|WP_059180342.1\|3131183_3132470_-\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	3.07895e-142
NZ_CP023529.1\|WP_059180344.1\|3133015_3133999_-\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270389	cd13671, PBP2_TRAP_SBP_like_3, Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold. This subfamily includes uncharacterized periplasmic substrate-binding proteins similar to TRAP transport systems such as SiaP (a sialic acid binding virulence factor) and TeaA (an ectoine binding protein). TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.8737e-139
NZ_CP023529.1\|WP_059180340.1\|3128115_3128742_+\|lysoplasmalogenase	gnl\|CDD\|226237	COG3714, COG3714, Predicted membrane protein [Function unknown].	1.94062e-53
NZ_CP023529.1\|WP_059180341.1\|3128817_3131004_+\|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA	gnl\|CDD\|236827	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional.	0
NZ_CP023529.1\|WP_059180337.1\|3126644_3127244_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	gnl\|CDD\|236793	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional.	6.46935e-146
NZ_CP023529.1\|WP_059180343.1\|3132480_3132990_-\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.76089e-28
NZ_CP023529.1\|WP_059180333.1\|3120713_3121979_-\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|180690	PRK06777, PRK06777, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP023529.1\|WP_059180345.1\|3134612_3135278_+\|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter	gnl\|CDD\|183041	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter.	3.90232e-134
NZ_CP023529.1\|WP_059180335.1\|3123254_3124310_-\|cell-division-protein-FtsX	gnl\|CDD\|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	0
NZ_CP023529.1\|WP_059180334.1\|3122139_3122997_-\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP023529.1\|WP_059180350.1\|3139241_3140036_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	4.33632e-61
NZ_CP023529.1\|WP_059180338.1\|3127227_3127509_+\|DUF1145-family-protein	gnl\|CDD\|182831	PRK10910, PRK10910, DUF1145 family protein.	5.55206e-43
NZ_CP023529.1\|WP_059180347.1\|3135900_3137130_-\|MFS-transporter	gnl\|CDD\|235348	PRK05122, PRK05122, major facilitator superfamily transporter; Provisional.	0

>NZ_CP023529.1|WP_059180341.1|3128817_3131004_+|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA
MSTPDTSKKVPQFSALKLSPVPAKEDCCSAGTCDTQSAPALPASGERYTWVVNGMDCAACARKVENAVKQVAGVNHVQVLFATEKLLVSAENDVSADVEAAVTKAGYSLRAEDAPAEKVSPLRENLPLITLIIMMALSWGLEHFNHPLGNLAFIATTLVGLFPIARQALRLMKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLVGERLEGWAASRARKGVSALMALKPETATRVFDGERQTVAINTLRPGDVIEVAAGGRLPADGTLITATASFDESALTGESIPVERATGEKVPAGATSVDRLVQLSVLSEPGESAIDRILKLIEEAEERRAPVERFIDRFSRIYTPVIMLIALLVTIVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLSQIQHVAFDKTGTLTVGKPQVTGIYPLESTEDALLTLAAAVEQGSTHPLAQAIVREAQSRGLTLPAANEQRALVGSGIEADVDGKKVLITAADKFPSQALSQQISELEQAGQTVIIVAVDGIAKGILALRDTLRDDAKEAVDALHQLGIQGVILTGDNPRAAAAIANELGLEFKAGLLPADKVQAVTALNGQAPLAMVGDGINDAPAMKASTIGIAMGSGTDVALETADAALTHNRLTGLAQMIGLARATRANIRQNIGIALGLKGIFLVTTLLGITGLWLAVLADTGATVLVTANALRLLRKK
>NZ_CP023529.1|WP_059180340.1|3128115_3128742_+|lysoplasmalogenase
MLWSFIAVCFSAWLYVDASYRGPVWQRWLFKPVTLLLLLLLAWQAPMFNAVSYLVLAGLCASLIGDALTLLPRQRVLYAVGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVIGALLVAVVWSRLEEMRWPVCTFIAMTLVMVWLAGELWFFRPTAPAMSAFFGATLLLLGNIVWLGSHYRRRFRADNAIAAACYFGGHFLIVRSLYI
>NZ_CP023529.1|WP_059180339.1|3127626_3127986_-|DUF2500-domain-containing-protein
MSKMPIFLIIVVAIIVIAASFRFVQQRRERADNDAAPLLQKRVVVSNKREKALDNRRSRQQQVTPAGTAMRYEVSFKPQSGGLETTFRVDEKQYHQLTVGEKGTLSYKGSRFEGFTAEP
>NZ_CP023529.1|WP_059180338.1|3127227_3127509_+|DUF1145-family-protein
MPILINFGRLLMVGVWAFLILNLVHPFPRPLNIFVNVALIFTAFMHALQMVMLKNGLPKDSPPMTGWQQLRVFIFGVFELLVWMKKFKAQTKK
>NZ_CP023529.1|WP_059180337.1|3126644_3127244_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase
MKKTNRPAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPSMVDAKCLDCFAGSGALGLEALSRYAASATLLEMERGVAQQLQQNLATLKATNAKVVTTNTLAFLAQPGTPHDVVFIDPPFRKGLLEETLTLLENNGWLADDALIYVESEVENGLPPVPMHWNLHREQVAGQVAYRLYHREVQGESHADTD
>NZ_CP023529.1|WP_059180336.1|3124970_3126506_-|signal-recognition-particle-docking-protein-FtsY
MAKQKKRGFFSWLGFGEKEQETEQKTEEQQTVEEQSQPETPVETAAIVEAEEQTHSDAETEAFAEDVVEVTEQVQESEKPQPVEAEPAVAEPVVDAVVEPVVEETPRAVVEHEELPLPEEVKAEEIVPEEWQAEAETVEIVETVEEEFVEQNVAEEADNDADITDEELEAQALAAVAAEEAEIVVPVADADEPVEEIVQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIIASLTEGASRKQLRDAEALYGLLKDEMGEILAKVDEPLNIEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNDIPVIAQHTGADSASVIFDAIQAAKARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEDAPHEIMLTLDASTGQNAISQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKSDDFIEALFARED
>NZ_CP023529.1|WP_015960827.1|3124302_3124968_-|cell-division-ATP-binding-protein-FtsE
MIRFEHVSKAYLGGRQALQGVTFHLQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKILFGGHDISRLKNREVPFLRRQIGMIFQDHHLLMDRTVFDNVAIPLIIAGASFDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLSLSDGHLHGGLSE
>NZ_CP023529.1|WP_059180335.1|3123254_3124310_-|cell-division-protein-FtsX
MNKRDAINQIRQFGNRFDRFRPSQGGGDGNRNAPKRAKSSPKPQSRKTNVFNEQVRYAFQGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAASQYYPSPQITVYLDKALDDNAAAQVVGQLQSEQGVEKVNYLSRDEALGEFRNWSGFGGALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRISQVKGIDEVRMDDSWFARLASLTGLVGRVAAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLGFSGAFLSLILSEILVMRLSSAVTEVAQVFGTKFDISGLGFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPQ
>NZ_CP023529.1|WP_059180334.1|3122139_3122997_-|RNA-polymerase-sigma-factor-RpoH
MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKTLILSHLRFVVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDDAQDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAANKLTHAMEGLDERSQAIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>NZ_CP023529.1|WP_059180333.1|3120713_3121979_-|4-aminobutyrate--2-oxoglutarate-transaminase
MKNNELNDRRLQATPRGVGVMCGFYADKAENATLWDVEGNEVIDFAAGIAVLNTGHRHPKVIAAIENQLQSFTHTAWQIVPYESYIALAERINARVPIDGPAKTAFFSTGAEAVENAVKIARAYTKRPGLITFGGAFHGRTFMTMALTGKVAPYKLGFGPFPGSVYHAQYPNMLHGVSSQEALKSVERIFKADIAPDQVAAIILEPVQGEGGFNVAPADFMQGLRALCDTHGILLIADEVQSGFARTGKLFSMEHHCVKPDLITMAKSLAGGMPLSAVSGRADVMDAPAPGGLGGTYAGNPLAIAAALAVLDVIDEEDLCTRAAHLGHHLVEVLNKAKSDCPFIADIRAQGSMVAVEFNDPQTGQPSPEFTREVQNRALQEGLLLLSCGVYGNVIRFLYPLTIPEAQFRKALDIISASLTR
>NZ_CP023529.1|WP_059180342.1|3131183_3132470_-|TRAP-transporter-large-permease
MDAFILLFTLAILLALGMPVAFAVGLSAVAGALWIDLPLEALMIQITSGVNKFTLLAIPFFILAGAIMAEGGIARRLVNFAYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSVMIPEMEKKGYPREYAAAVTASGSVQAILIPPSHNSVIYSLAAGGTVSIATLFIAGVLPGLLLGVSLMVLCLGFAHKRGYPKGERIPFKQAVKIFFDALWGLLTVVIILGGILSGIFTATESAAVACLWAFFVTMFIYRDYKWKELPKLMCRTVKTVTIVMILIGFAAAFGAVMTYMQLPMRITEFFTSLSDNKYVILMYLNIMLLLIGTLMDMAPLILILTPVLLPVTNSLGIDPVHFGMIMMVNLGIGLITPPVGSVLFVASAVSKQRIETVMRAMLPFYAMLLVVLGMVTYIPAISLWLPGVLGMQ
>NZ_CP023529.1|WP_059180343.1|3132480_3132990_-|TRAP-transporter-small-permease
MSELYLKWMDRLYLFAMGVAGVSLLVMTIVIPIGIFSRYVLNRGESWPEPIAIICMVTFTFIGAAVGYRAGSHIAVNMLTDRLPDMLKNLCARIVDLLMLLISALIFWYSLLLCIELWEQPVAEFPILTSGESYLPLPVGSAIMILFVIERLLFGSQENRPVVLIGNHS
>NZ_CP023529.1|WP_059180344.1|3133015_3133999_-|TRAP-transporter-substrate-binding-protein
MKTTLKPLLASLCLSTASLLFATTAAAQTIKAADVHPEGYPNVVAVQNMGEKLNQQTDGKLEIKVFPGGVLGDEKQMIEQAQMGAIDIIRVSMAPVAAILPDIEVFTLPYVFRDEDHMHKVIDGDIGKEIGEKLTANPKSRLVFLGWMDSGTRNLITKEPIVKPEDLQGKKIRVQGSPVALATLKAMGANSVAMGVSEVYSGMQTGVIDGAENNPPTFVAHNYMPVAKNYTLSGHFITPEMLLYSKVKWDKLSADDQQKIKTLAREAQFEQRKLWDAYNQQALDKMKAGGVQFHDIDKAVFIKATEPVRAQYGDKHKELMQAIADVQ
>NZ_CP023529.1|WP_059180405.1|3134145_3134391_-|sulfurtransferase-TusA
MTDLFSTPDHTLDAQGLRCPEPVMMVRKTVRTMQTGETLLIIADDPATTRDIPGFCTFMEHELIAKETDALPYRYLLRKGA
>NZ_CP023529.1|WP_059180345.1|3134612_3135278_+|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter
MTQFSQSQRVKALFWLSLFHLLVITSSNYLVQLPIAIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMLPALFVSYGISSLFYMGSWQGFEALLHFNLFVARIAAASFMAYALGQILDVHVFNRLRQNHRWWMAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEITALQAG
>NZ_CP023529.1|WP_059180346.1|3135350_3135908_+|DcrB-family-lipoprotein
MRNLVKYVGIGLLVVGLAACDNSDTKTPVQGAAAESNATGQAVELMDGKLSFALPADMTDQSGKLGTQANNMHVYSDATGQKAVIVIVGDDSNEDLAVLAKRLEDQQRSRDPQLQVVTNKSIDLKGHTLQQLDSIISAKGQTAYSSVVLGKVDGKLLTLQITLPAEDQQKAQTTAENIINTIVIK
>NZ_CP023529.1|WP_059180347.1|3135900_3137130_-|MFS-transporter
MPVPAAEPALSGLRLNLRIVSVVMFNFASYLTIGLPLAVLPGYVHDVMGYSAFWAGLVISLQYFATLLSRPQSGRYADLFGPKSIVVVGLCGCFLSGLSYLLAATTSGWPIMSLALLCLGRVILGIGQSLAGTGSTLWGVGVVGNAHIGRVISWNGIVTYGAMALGAPLGVLCYAWGGLHGLALTIMAVAFIAILLAIPRPKVKATKGKPLPFRAVLGRVWPYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGARLLFPNGINRLGGLNVAMICFAVEIIGLLLTGIADEPWIAKIGVFLAGAGFSLVFPALGVVAVKAVPQQNQGSALATYTVFMDMSLGVTGPLAGLLMAWAGVPVIYLAAAGLVGVALLLTWRLKKRPPTQTPEAVESSSKIT
>NZ_CP023529.1|WP_059180348.1|3137274_3138324_+|AI-2E-family-transporter
MTSAQPDKTGLHILLKLACLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGIRRPVAITIVVLVMLIVLTALFGVLAASLSEFSTMLPKYNKELTRKALELQEMLPFLNLHMSPERMLQRMDSEKIMTFATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKLRFALNNPQIHIAGLHRALKGVSKYLALKTLLSLWTGVIVWLGLTLMGVQFALMWGVLAFLMNYVPNIGAVLSAVPPMIQAFLFNGFYECMLVGALFLVVHMILGNIVEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGGKLAILLGPGRPKSRLPG
>NZ_CP023529.1|WP_059180349.1|3138591_3139173_+|4'-phosphopantetheinyl-transferase-AcpT
MYQLVLGKISTLNADPLVSALADRAPLGARRARWLAGRTLLTRALSPASLPEIVFGEQGKPAFVDANPFWFNLSHSGDDIALLVSDEGEVGCDIEVIRPRDNWQALANAVFSVAEHDELERETPEEKLSAFWRIWTRKEAIVKQRGGSAWQIVSIDSTFKSALSVSHCQFGALSLAVCTPTPFTLDDNAVTVL
>NZ_CP023529.1|WP_059180350.1|3139241_3140036_+|SDR-family-NAD(P)-dependent-oxidoreductase
MKIDLTGKVALVTASTGGIGFAIARGLAESGAEVIINGRSVESVNKGIQQLQQVVPGVQVRAAIADLSTPDGVESLLKVASNVDILVNNAGIYGPQDFYATDDDTWNNYWQTNVMSGVRLSRALLPGMVQKGWGRVVFISSESACNIPADMIHYGVTKTAQLSLARGLAKFVAGSGVTVNSVLPGPTMSDGFAEMMKDEREKTGKSLETLAKEFVMANRPASIIQRAATVEEVANMVVYVCSTQASATTGAALRVDGGVVDDII

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Crispr_ID: NZ_CP023529_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_8

3830175-3830335

Orphan

Consensus_repeat	Method
CCCTCGATCCTTTGGGGAGCATTCTGGGGAAAAGACGCACAGTACGCCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_8

>merge|NZ_CP023529|8|3830175-3830335|CRISPRCasFinder
CCCTCGATCCTTTGGGGAGCATTCTGGGGAAAAGACGCACAGTACGCCCTGCCTCATGGGCGGAAGATTTGCGCTTCCCCCTCTCCCTAAGGGAGAGGGAGAAAAACAAGCCCTCGATCCTTTGGGGAGCATTCTGGGGAAAAGACGCACATTACGCCCTG

>NZ_CP023529|8|8|3830175-3830335|CRISPRCasFinder
CCCTCGATCCTTTGGGGAGCATTCTGGGGAAAAGACGCACAGTACGCCCTG	CCTCATGGGCGGAAGATTTGCGCTTCCCCCTCTCCCTAAGGGAGAGGGAGAAAAACAAG
CCCTCGATCCTTTGGGGAGCATTCTGGGGAAAAGACGCACATTACGCCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059179875.1\|3828474_3829995_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP023529.1\|WP_059179877.1\|3832773_3833097_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
NZ_CP023529.1\|WP_059179867.1\|3819584_3820259_-\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|223861
NZ_CP023529.1\|WP_059179869.1\|3822887_3823619_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP023529.1\|WP_059179870.1\|3823615_3824620_-\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|223598
NZ_CP023529.1\|WP_059179880.1\|3834486_3834921_-\|aminoalkylphosphonate-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182266
NZ_CP023529.1\|WP_059179878.1\|3833161_3833647_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|170114
NZ_CP023529.1\|WP_059179885.1\|3838036_3838882_-\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	unknown	unknown	gnl\|CDD\|226154
NZ_CP023529.1\|WP_059179876.1\|3830421_3832704_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP023529.1\|WP_059179873.1\|3826511_3827453_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380544
NZ_CP023529.1\|WP_059179883.1\|3836594_3837275_-\|phosphonate-C-P-lyase-system-protein-PhnL	unknown	unknown	gnl\|CDD\|227118
NZ_CP023529.1\|WP_059179871.1\|3824619_3825480_-\|ketose-1,6-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|180701
NZ_CP023529.1\|WP_059179874.1\|3827482_3828478_-\|ribose-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226633
NZ_CP023529.1\|WP_059179884.1\|3837284_3838040_-\|phosphonate-C-P-lyase-system-protein-PhnK	unknown	unknown	gnl\|CDD\|183280
NZ_CP023529.1\|WP_059179879.1\|3833718_3834477_-\|phosphonate-metabolism-protein-PhnP	unknown	unknown	gnl\|CDD\|183052
NZ_CP023529.1\|WP_059179866.1\|3818231_3819545_+\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
NZ_CP023529.1\|WP_059179872.1\|3825489_3826176_-\|D-lyxose/D-mannose-family-sugar-isomerase	unknown	unknown	gnl\|CDD\|377827
NZ_CP023529.1\|WP_082691943.1\|3820484_3822632_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
NZ_CP023529.1\|WP_059179882.1\|3835461_3836598_-\|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase	unknown	unknown	gnl\|CDD\|237967
NZ_CP023529.1\|WP_096759563.1\|3834907_3835465_-\|ribose-1,5-bisphosphokinase	unknown	unknown	gnl\|CDD\|236648

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059179875.1\|3828474_3829995_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP023529.1\|WP_059179877.1\|3832773_3833097_+\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.00129518
NZ_CP023529.1\|WP_059179867.1\|3819584_3820259_-\|sel1-repeat-family-protein	gnl\|CDD\|223861	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only].	3.58484e-15
NZ_CP023529.1\|WP_059179869.1\|3822887_3823619_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.6584e-75
NZ_CP023529.1\|WP_059179870.1\|3823615_3824620_-\|carbohydrate-kinase-family-protein	gnl\|CDD\|223598	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism].	1.21315e-50
NZ_CP023529.1\|WP_059179880.1\|3834486_3834921_-\|aminoalkylphosphonate-N-acetyltransferase	gnl\|CDD\|182266	PRK10146, PRK10146, aminoalkylphosphonate N-acetyltransferase.	1.28423e-98
NZ_CP023529.1\|WP_059179878.1\|3833161_3833647_-\|hypothetical-protein	gnl\|CDD\|170114	PRK09823, PRK09823, putative inner membrane protein; Provisional.	1.3863e-64
NZ_CP023529.1\|WP_059179885.1\|3838036_3838882_-\|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ	gnl\|CDD\|226154	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism].	0
NZ_CP023529.1\|WP_059179876.1\|3830421_3832704_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.06801e-99
NZ_CP023529.1\|WP_059179873.1\|3826511_3827453_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380544	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	4.98934e-132
NZ_CP023529.1\|WP_059179883.1\|3836594_3837275_-\|phosphonate-C-P-lyase-system-protein-PhnL	gnl\|CDD\|227118	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	9.39631e-145
NZ_CP023529.1\|WP_059179871.1\|3824619_3825480_-\|ketose-1,6-bisphosphate-aldolase	gnl\|CDD\|180701	PRK06801, PRK06801, ketose 1,6-bisphosphate aldolase.	0
NZ_CP023529.1\|WP_059179874.1\|3827482_3828478_-\|ribose-ABC-transporter-permease	gnl\|CDD\|226633	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only].	2.35146e-172
NZ_CP023529.1\|WP_059179884.1\|3837284_3838040_-\|phosphonate-C-P-lyase-system-protein-PhnK	gnl\|CDD\|183280	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional.	0
NZ_CP023529.1\|WP_059179879.1\|3833718_3834477_-\|phosphonate-metabolism-protein-PhnP	gnl\|CDD\|183052	PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional.	1.28958e-164
NZ_CP023529.1\|WP_059179866.1\|3818231_3819545_+\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
NZ_CP023529.1\|WP_059179872.1\|3825489_3826176_-\|D-lyxose/D-mannose-family-sugar-isomerase	gnl\|CDD\|377827	pfam07385, Lyx_isomer, D-lyxose isomerase. Members of this family of sugar isomerases belong to the cupin superfamily. The enzyme from Cohnella laevoribosii has been shown to be specific for D-lyxose, L-ribose, and D-mannose. E. coli sugar isomerase (EcSI) has been structurally and functionally characterized and shows a preference for D-lyxose and D-mannose.	6.01557e-145
NZ_CP023529.1\|WP_082691943.1\|3820484_3822632_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
NZ_CP023529.1\|WP_059179882.1\|3835461_3836598_-\|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase	gnl\|CDD\|237967	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional.	0
NZ_CP023529.1\|WP_096759563.1\|3834907_3835465_-\|ribose-1,5-bisphosphokinase	gnl\|CDD\|236648	PRK10078, PRK10078, ribose 1,5-bisphosphokinase; Provisional.	7.47016e-122

>NZ_CP023529.1|WP_059179875.1|3828474_3829995_-|sugar-ABC-transporter-ATP-binding-protein
MSRTPVLEMRNIAKTFGNFHALKGVDLTVWPGEIHALMGENGAGKSTLMKILAGAYIATSGEVLIDGQPYTIKGPKDALAAGITLIYQEMQLAPNLTVAENIFLGSELSRGGLVQRKEMAAQAQTVIDRLGAHFKSTDLVMKLTIAEQQQVEIARALHRKSRVLVMDEPTAALSSRETHRLFELILRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDKLNASELVRMMVGRPLSDLFNKERDIPLGGPRLNVHHLTDGKKVQPCSLQVRSGEIVGLAGLVGAGRSELAHLIFGVRKATGGMIEVDGEPVVIHSPRAAIDQGIGYLTENRKEQGLFLELAAQENITMATLERDASFGMLNRKKAQSISDDAIALLNIRVPHSQVRAGGLSGGNQQKLLISRWVAIGPRILILDEPTRGVDVGAKSEIYRIMNQMARKGVAILMISSELPEVVGMSDRVYVMREGSIAGELHGDSITQENIMTLATGVNDSHHQAVQP
>NZ_CP023529.1|WP_059179874.1|3827482_3828478_-|ribose-ABC-transporter-permease
MTQTPTPQQVAKSASAKKMLMSDLMQTVGILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFIILTGGIDLSVGSILGTTAVAAMVVSLIPEFAMLSIPAALMLGMVLGLFNGALVAFAGLPPFIVTLGTYTALRGAAYLLADGTTVINSNISFEWIGNNYLGPVPWLVVIALAVIAVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKYRTRHHQSA
>NZ_CP023529.1|WP_059179873.1|3826511_3827453_-|ABC-transporter-substrate-binding-protein
MRLKPLVTALCAGALLASAPFAQAKDLKSIGVTVGDLANPFFVQITKGAELEARKLAGDNVKVTLVSSGYDLGQQVAQIDNFIAAKVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAEGADATITSDNTQAGEMACKYITDRLKGKGDVVIINGPPVSAVQNRVEGCQTEFKRHPGIKVLSYNQNAKGSREGGLEVMTALLAANPKIDGVFAINDPTAIGADLAAKQAQRNEFFIVGVDGSPDGEEALKRENSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPKEPVLIPVTMIDKKSVANYKGWTVK
>NZ_CP023529.1|WP_059179872.1|3825489_3826176_-|D-lyxose/D-mannose-family-sugar-isomerase
MKRSEINEILGHTRQFFSKHDVHLPPFASFPPTQWQQLDHHAWREVFDLKLGWDVTAFGENRFAELGLTLFALRNGSPNGTPYEKCYAEKIMQVRDGQVTPMHFHWRKREDIINRGGGNLIIELWNAGTHEETEETDVTVSVDGCFQTHAAGSQLRLRPGESICLTPGLYHSFWGERGFGDVLVGEVSSVNDDDHDNHFLQPVSRYNTIEEDEPAVLVLCNEYSLFRL
>NZ_CP023529.1|WP_059179871.1|3824619_3825480_-|ketose-1,6-bisphosphate-aldolase
MPLISLAAGLEHARENRYALGAFNVLDSHFLRALFAAAKQERSPFIINIAEVHFKYLSLDSLVEAVRFEAARHDIPVVLNLDHGLHFEAVVRALRLGFSSVMFDGSTLSYEENIRQTREVVKMCHAVGVSVEAELGAVGGDEGGALYGHADEAFFTDPQLAREFVDQTGIDALAVAIGNAHGKYKGEPKLDFPRLDAIRQQTGLPLVLHGGSGISDADFRRAIELGIHKINFYTGMSQAALAAVEHRITHRQPLYDEFAELLLGIEEAITDTVSEQMRIFGSAGHA
>NZ_CP023529.1|WP_059179870.1|3823615_3824620_-|carbohydrate-kinase-family-protein
MERKGIIAAGNMLVDHVHQIVQWPERGWLAEIIHSERATGGAPLNVLLTLAKMHVGLPLQAVGLIGEDSDGDYIMAMLDQYHVNRQRVQRTTFAPTSMSQVMTDPTGQRTFFHSPAANRLLDLPAFDRLDASMKIFHLGYLLLLDSLDLPDDEFGTRSARLLAQMREQGYETSLDLVSRKGDPRYQPLVLPALRYVDYLVINELEAGEFSGLDMRNGDDAPDIDHIALAASQLLAAGVKQRVVIHCPEGAWGEAPGEPGQWIASKQLEQEEIIGSVGAGDAFCAGFLYGCHEAWPLTDSIQLAHACARASLLAANAIDGAKTLEELKTLIHDNA
>NZ_CP023529.1|WP_059179869.1|3822887_3823619_+|response-regulator-transcription-factor
MKPAILVVDDDTAVCELLQDVLNEHVFAVHVCHNGLDALAMAQREPAIALVLLDMMLPDINGLMVLQQLQKLRPELPVVMLTGMGGESDVVVGLEMGADDYIGKPFNPRVVVARVKAVLRRTGVLAAEPTAPRVSGIGFNGWTLDTTRCELSDPQRMTVPLTQGEYGLLLALAQNARRVLSREQLLELTHSESAEVFDRTIDVLIMRLRRKIEINPHQPLLIKTIRGLGYVFAADVSHHDKAA
>NZ_CP023529.1|WP_082691943.1|3820484_3822632_-|formate-dehydrogenase-subunit-alpha
MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTPRLKTPMIRRTRGGKLESVSWDEALDYVASRLSDIKAKYGPDAIQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFIFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALRNGSNIALLNAMGHVIIEENLYDQAFVASRTEGFEEYRKIVEGYTPESVETITGVTAHEIRQAARMYAAAKTASILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHVGVNPVRGQNNVQGACDMGALPDTYPGYQYVKFPENRAKFAKAWGVESLPEHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKGFEDLELVIVQDIFMTKTAAAADVILPSTSWGEHEGVYTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFTGATYDKMGELGYIQWPCRDESDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPVDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTADAARLGIEDEALVWVSSRKGRIITRAQVSDRPNKGAVYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQHSAEQYVIDEYAKLKARLRESAMG
>NZ_CP023529.1|WP_059179867.1|3819584_3820259_-|sel1-repeat-family-protein
MKLIVILLSLFTAFANADEIGSQFKDKAEAGDARAQYYLADTWFSSGDDKQAGLWAEKAARGGDIDAMALLAQIHFKHGEYAQAKSLAQQATLAGSKRGAIMLARLLVNTQAGPTDYPQAITLLQTATDDIDNDSAVDAQMLLGLIYANGVEMAQDDAQAELWLKRSSALSRTGYAEYWAGMVFQQGEKGFITPNKQKALYWFNLSCSEGFDTGCEEFEALSGE
>NZ_CP023529.1|WP_059179866.1|3818231_3819545_+|glutamate/aspartate:proton-symporter-GltP
MKILKISLAWQILLALVLGILLGSYLHYHSDSREWLVVNMLSPAGDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTILYFEVITTVAIILGITLANVFQPGSGIDMSQLATVDISKYQSTTAEVQSHAHGLMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFASLWPLAKLVILVHFAILFFALVVLGLVARICGLRIWILIRILKEELILAYSTASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSLWQEIVLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHQFDRKKAMAYEREVLGCFDKTADR
>NZ_CP023529.1|WP_059179876.1|3830421_3832704_+|response-regulator
MPSRRPPFFASARGRLLIFNLLVVAVTLMVSGVAVLGFRHASQIQEQVQQQTLNDMTGSMNLARDTANVATAAVRLSQVVGALEYKSEADRLKQTQMALRRSLEQLADAPLAQQEPALVARIIRRSNELQQSVTGMLERGQRRHLERNELLSSLYQSQSFLRHLQDINRRFGGDVPDAQLLGEMDRLLMAAIETPSPRATIQQLNAVMASLPQSATLPVIDFVLPDFNAELRKLAPLSKQLEESDLAISWYMFHIKALVAILNSDINQYVAQVAQASELRTAQSHKELRSISVFISVFALLALIITGFACWYIYRNLGSNLTAISRAMSRLAHGEPDVSVPALQRRDELGELARAFNVFARNTASLEHTTRLLKQKTTQMEIDRLERQGLEEALLHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLELANPESPDAPRITRALKAAERGALLTQRLLAFSRKQSLHPHAVEMKPLLENLGELMCHSLPATITLDIEAQHPAWPAWIDVSQLENAIINLVMNARDAMEGEGGIIRIRTWNQRVTRSDGRRQDMVALEVIDHGSGMSQEVKSRVFEPFFTTKQTGSGSGLGLSMVYGFVRQSGGRVEIESAPGQGTTVRLQLPRSLQQVMIEDETLAANEAPQSDRLVLVLEDEADVRQTLCEQLHQLGYLTLEAENGEQALRMLGSSPDIEMFISDLMLPGGMSGAEVIHHVRTHFPLLPVLMVSGQDLRPTHNPQLPDVELLRKPFTRAQLAQALHKAMKI
>NZ_CP023529.1|WP_059179877.1|3832773_3833097_+|hypothetical-protein
MKNYASALLFGLLSLTSQLAHADLVDDAIGNIQQAINDAYNPSSASRRDEDDDRYEDRRRNDSRQYDDRRRQLEDRRRQLDDRQRQLDQDRRQLEDDERRLEDNYDG
>NZ_CP023529.1|WP_059179878.1|3833161_3833647_-|hypothetical-protein
MTKTRRIFHHACWFALLGPHLGVPVTFAGELLTNHRTAENLLLQIVLNFPYFMAVTWFLGGVSALLTGVAAACLPQHIYQHAWHRTLACGAMGAAIATLYGLLYSGSLDSAIFWMATGPGLLAGLIMGWCVPYLPGRGDKKYVRPAIVKIPSENAQPDVKA
>NZ_CP023529.1|WP_059179879.1|3833718_3834477_-|phosphonate-metabolism-protein-PhnP
MCLTITLTGTGGAQLVPVFGCDCAACRRARLQEAHRRRPCSAAVKFNDAVTLLDAGIPHLMDDWPAGSFQQFLLTHYHMDHVQGLFPLRWGVGATIPVYGPPDDAGCDDLFKHPGILDFSRTVEPFVMFELQGLRVTPLPLNHSKLTFGYLLESAHSRVAWLSDTAGLPEKTVKFLLNNQPQVIVIDCSHAPREETPRNHSDLNTVIALNKVIGCPQVILTHISHQFDVWLMDNPLPDGFEAGYDGMVLMLD
>NZ_CP023529.1|WP_059179880.1|3834486_3834921_-|aminoalkylphosphonate-N-acetyltransferase
MPACELRPATPEDAQAVYGLICELKQAEFDRDAFLAGFLANLQDRHMHYQLADLDGQTVGMIGLHLQFHLHHVNWIGEIQELVVLPQARGLKVGSQLLAWAEDEARKVGAEMTELSTSVKRVDAHRFYIREGYAQSHYRFTKPL
>NZ_CP023529.1|WP_096759563.1|3834907_3835465_-|ribose-1,5-bisphosphokinase
MMGKLIWLMGPSGSGKDSLLTALRQQEHTRLLVAHRYITRAANAGSENHIALSEQEFFTRAGQNLLALSWHANGFYYGVGVEIDLWLHAGFNVLVNGSRAHLPQAHARYGDALLPVCLQVSPDVLRHRLQNRGRETAREIDERLARAARYTPSECHLLNNDGSLLQSVDNLIALIRQKEKCHACL
>NZ_CP023529.1|WP_059179882.1|3835461_3836598_-|alpha-D-ribose-1-methylphosphonate-5-triphosphate-diphosphatase
MIINNVKLVLENDVVEGSIDVQGGEIRAFAETQSRSPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAVEDTQKRGLNRAEHRLHLRCELPHFTTLPLFEKLVGREPVSLVSLMDHSPGQRQFANIEKYREYYQGKYSLSDDEMARYEEEQLALAAQWSQPNRLSIAGICRERNIALASHDDATHDHVLESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASQLASLGLLDILSSDYYPGSLLDAAFRVADDAGNSFTLPQAIRLVTKNPADALNLRDRGVIGEGKRADLVLAHRKGEHVHIDHVWRQGKRVF
>NZ_CP023529.1|WP_059179883.1|3836594_3837275_-|phosphonate-C-P-lyase-system-protein-PhnL
MIRVENVSKTFVLHQQNGVRLPVLQNASLEVNGGECVVLHGHSGSGKSTLLRSLYANYLPDEGHIHIRHGDEWVDLVQAPARKVLEVRRATIGWVSQFLRVIPRISALDVVMQPLLDLGVPREACATKAANLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIEHAKTRGAAIVGIFHDAAVRDRVADRLHTMGVAP
>NZ_CP023529.1|WP_059179884.1|3837284_3838040_-|phosphonate-C-P-lyase-system-protein-PhnK
MKPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQNGEIRYQDRSLYGMSEAERRRLLRTEWGVVHQHPMDGLRRQVSAGGNIGERLMATGARHYGTIRATAQQWLEEVEIPASRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELDLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN
>NZ_CP023529.1|WP_059179885.1|3838036_3838882_-|alpha-D-ribose-1-methylphosphonate-5-phosphate-C-P-lyase-PhnJ
MANLSGYNFAYLDEQTKRMIRRAILKAVSIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGEEDVLKVIDQGADDTTNAVSIRSFFTRVTGVHTTERSEDATLIQTRHRIPETPLTEDQILIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPYTRVESLDFDDHPFTVQEWDEPCAICGSRHSYLDEVVLDDTGKRMFVCSDTDFCRQQSEANGQ

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Crispr_ID: NZ_CP023529_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_9

3984908-3984971

Orphan

Consensus_repeat	Method
CCCTCTGCTTGTGGTGGAGAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_9

>merge|NZ_CP023529|9|3984908-3984971|CRISPRCasFinder
CTCTATGCTTGTGGTGGAGAGAATCGCGCGGGGCTGTTTTGACTTCTGCCCGTGGTTGAGGGAA

>NZ_CP023529|9|9|3984908-3984971|CRISPRCasFinder
CTCTATGCTTGTGGTGGAGAGAA	TCGCGCGGGGCTGTTTTG
ACTTCTGCCCGTGGTTGAGGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059179992.1\|3976941_3978597_-\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|182849
NZ_CP023529.1\|WP_059179989.1\|3971712_3973623_+\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP023529.1\|WP_059179996.1\|3988570_3989368_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP023529.1\|WP_059179999.1\|3991545_3991932_-\|2-iminobutanoate/2-iminopropanoate-deaminase	unknown	unknown	gnl\|CDD\|105214
NZ_CP023529.1\|WP_059179986.1\|3968375_3969494_+\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	unknown	unknown	gnl\|CDD\|273623
NZ_CP023529.1\|WP_059179987.1\|3969490_3970231_+\|KDGP-aldolase-family-protein	unknown	unknown	gnl\|CDD\|188342
NZ_CP023529.1\|WP_059180000.1\|3992111_3992573_-\|aspartate-carbamoyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|234859
NZ_CP023529.1\|WP_059179993.1\|3980311_3981259_-\|HTH-type-transcriptional-regulator-TreR	unknown	unknown	gnl\|CDD\|181905
NZ_CP023529.1\|WP_059180001.1\|3992585_3993518_-\|aspartate-carbamoyltransferase	unknown	unknown	gnl\|CDD\|223614
NZ_CP023529.1\|WP_059179994.1\|3981890_3984599_+\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|236705
NZ_CP023529.1\|WP_059179995.1\|3985223_3987608_+\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|119338
NZ_CP023529.1\|WP_059180003.1\|3994320_3995724_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP023529.1\|WP_059179998.1\|3990948_3991428_+\|type-VI-secretion-system-tube-protein-Hcp	unknown	unknown	gnl\|CDD\|213799
NZ_CP023529.1\|WP_059179997.1\|3990021_3990714_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023529.1\|WP_059180002.1\|3993757_3994237_-\|ArgR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224355
NZ_CP023529.1\|WP_059179988.1\|3970547_3971693_+\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP023529.1\|WP_059179991.1\|3974427_3976566_-\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|236436
NZ_CP023529.1\|WP_059180044.1\|3978648_3980067_-\|PTS-trehalose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|182896
NZ_CP023529.1\|WP_059179990.1\|3973656_3974121_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|236853
NZ_CP023529.1\|WP_072241926.1\|3993552_3993657_-\|pyrBI-operon-leader-peptide	unknown	unknown	gnl\|CDD\|236664

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059179992.1\|3976941_3978597_-\|alpha,alpha-phosphotrehalase	gnl\|CDD\|182849	PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional.	0
NZ_CP023529.1\|WP_059179989.1\|3971712_3973623_+\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	4.0892e-76
NZ_CP023529.1\|WP_059179996.1\|3988570_3989368_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.88816e-08
NZ_CP023529.1\|WP_059179999.1\|3991545_3991932_-\|2-iminobutanoate/2-iminopropanoate-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	3.98419e-66
NZ_CP023529.1\|WP_059179986.1\|3968375_3969494_+\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	gnl\|CDD\|273623	TIGR01437, selA_rel, uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP023529.1\|WP_059179987.1\|3969490_3970231_+\|KDGP-aldolase-family-protein	gnl\|CDD\|188342	TIGR03581, EF_0839, conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved].	1.46823e-149
NZ_CP023529.1\|WP_059180000.1\|3992111_3992573_-\|aspartate-carbamoyltransferase-regulatory-subunit	gnl\|CDD\|234859	PRK00893, PRK00893, aspartate carbamoyltransferase regulatory subunit; Reviewed.	2.70736e-82
NZ_CP023529.1\|WP_059179993.1\|3980311_3981259_-\|HTH-type-transcriptional-regulator-TreR	gnl\|CDD\|181905	PRK09492, treR, HTH-type transcriptional regulator TreR.	0
NZ_CP023529.1\|WP_059180001.1\|3992585_3993518_-\|aspartate-carbamoyltransferase	gnl\|CDD\|223614	COG0540, PyrB, Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism].	7.36731e-165
NZ_CP023529.1\|WP_059179994.1\|3981890_3984599_+\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|236705	PRK10517, PRK10517, magnesium-transporting P-type ATPase MgtA.	0
NZ_CP023529.1\|WP_059179995.1\|3985223_3987608_+\|beta-N-acetylhexosaminidase	gnl\|CDD\|119338	cd06570, GH20_chitobiase-like_1, A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	1.24715e-157
NZ_CP023529.1\|WP_059180003.1\|3994320_3995724_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP023529.1\|WP_059179998.1\|3990948_3991428_+\|type-VI-secretion-system-tube-protein-Hcp	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	1.2185e-44
NZ_CP023529.1\|WP_059180002.1\|3993757_3994237_-\|ArgR-family-transcriptional-regulator	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.61017e-46
NZ_CP023529.1\|WP_059179988.1\|3970547_3971693_+\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	1.22181e-109
NZ_CP023529.1\|WP_059179991.1\|3974427_3976566_-\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|236436	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
NZ_CP023529.1\|WP_059180044.1\|3978648_3980067_-\|PTS-trehalose-transporter-subunit-IIBC	gnl\|CDD\|182896	PRK11007, PRK11007, PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional.	0
NZ_CP023529.1\|WP_059179990.1\|3973656_3974121_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|236853	PRK11121, nrdG, anaerobic ribonucleoside-triphosphate reductase-activating protein.	9.55297e-121
NZ_CP023529.1\|WP_072241926.1\|3993552_3993657_-\|pyrBI-operon-leader-peptide	gnl\|CDD\|236664	PRK10224, PRK10224, pyr operon leader peptide.	3.95771e-07

>NZ_CP023529.1|WP_059179994.1|3981890_3984599_+|magnesium-translocating-P-type-ATPase
MLKNITRQLHALFGRHLPRRLIQRDLLPDTKHVAGTVIPPTLTEHCLKAAAMDENEVWRAFGGHPEGLNAAEVEKTRAKHGDNQIPAQKPSPWFVHLWLCYRNPFNLLLTALAIVSYATEDLFAAGVIALMVAISTLLNFIQEARSTRAADALKAMVSNTATVQRVINEKGESAWLELPIDQLVVGDVIKLAAGDMIPADLRIVKARDLFVAQASLTGESLPVEKVARSRDPQQTNPLESDTLCFMGTTVVSGTAQAIVIATGGNTWFGQLAGRVSQQESEPNAFQKGIGRVSMLLIRFMMVMTPIVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIAGKVSERVLHTAWLNSHYQTGLKNLLDVAVLEGVDEDSARTLSTRWQKVDEIPFDFERRRMSVVVSEQADVHQLICKGALQEILNVSAQVRHNGEIVPLDDTMLRRIKRVTDNLNRQGLRVVAVASKFLPARVGDYQRIDESDLILEGYIAFLDPPKETTAPALKALSASGITVKILTGDSELVAAKVCHDVGLDAGDVVTGSDIETLSDDELAALAKQTTLFARLTPMHKERIVTLLRREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEQGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLMYDVSQVAIPFDNVDEEQIKKPQRWNPADLGRFMLFFGPISSIFDILTFCLMWFVFHANTPEHQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLIIMTLLVMVMGIALPFSPLASYLSLQALPLSYFPWLVAILAGYMVLTQMVKGFYARRYGWQ
>NZ_CP023529.1|WP_059179993.1|3980311_3981259_-|HTH-type-transcriptional-regulator-TreR
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVSRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSTQMVEEHLGMLQRRNIDGVVLFGFSGIKDDMLKPWQASLVLLARDASGFASVCYDDEGAIRALMQKLYEQGHRHISYLGVPHSDVTTGKRRHEAYLAFCKKHNLPAVASLPGLAMKQGYDQVASVLTPHTTALICATDTLALGASKYLQEQRIDNLQLASVGSTPLMKFLHPEIITVDPGYAEAGHQAAAQLIEQINGRSEPRQIVIPAKIA
>NZ_CP023529.1|WP_059180044.1|3978648_3980067_-|PTS-trehalose-transporter-subunit-IIBC
MSKVKQTDIDQLIVLVGGRENIATVSHCITRLRFVLNDPAKADPKAIENLSMVKGCFTNAGQFQVVIGTEVGDYYQALLATTGHSSADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDVPISDGKTLAQMYPALQSIYDFLWLIGEAIFFYLPVGICWSAVRKMGGTPILGIVLGITLVSPQLMNAYLLGQQVPDVWNFGMFTIAKVGYQAQVIPALLAGLALGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHAFIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDMQMIQSLGGTPVWPLIALSNIAQASAVTGIIIVSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAALLCGLNGVMANGIGVGGLPGILSIQPAYWQVFALATAIAVIVPMALTTVVYQRKFRQGTLQIV
>NZ_CP023529.1|WP_059179992.1|3976941_3978597_-|alpha,alpha-phosphotrehalase
MNTLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLKTLGIDAIWLTPFYISPQVDNGYDVANYTAIDPAYGTLDDFDELVAQAHTRGIRIVLDMVLNHTSTQHAWFRESLNKASPYRQFYIWRDGTPDALPNNWRSKFGGNAWRWHAESEQYYLHLFAPEQADLNWENTEVRAELKKVCEFWADRGVDGLRLDVINLISKQQDFPDDNLGDGRRFYTDGPRVHEFLQEMSRDVFTPRALMTVGEMSSTSLENCQQYAALDGRELSMTFNFHHLKVDYPNGEKWTQALPDFVALKTLFSHWQQGMHNKAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLGMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAENREKGRETDELLAILASKSRDNGRTPMQWDASQHGGFTQGEPWIDLCDNVATINVAAALQDPDSVFYTYQTLIQLRKTLPVLTWGDYQDLLPEHPSLWCYRRQWQGQTLIVAANLSRECQQWHPTAQEGNWRVVLSNYDEAANTLAAMTLRPFEAIWWLQD
>NZ_CP023529.1|WP_059179991.1|3974427_3976566_-|anaerobic-ribonucleoside-triphosphate-reductase
MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEIVSQQMNERSQVDINEIQTAVENQLMSGPHKQLARAYIEYRHDRDIQREKRGRLNQEIRGLVEQTNSALLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGEIHYHDLDYSPFFPMFNCMLIDLKGMLTHGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAESFKKHRKVAEEWQIPDADGYAHSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQQSILRNRISGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEDENGEQVHDGRNNLGVISLNLPRIALEAKGNEEAFWNLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIFKNGRASISLGYIGIHETINALFGDQHVYDSEALRAKGVAIVQRLRDAVDLWKDETGYGFSLYSTPSENLCDRFCRLDTAEFGVVDGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAAYPPVASGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG
>NZ_CP023529.1|WP_059179990.1|3973656_3974121_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MRYHNYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRLNSGQPFTDEMADRIIDDLNDTRIKRQGITLSGGDPLHPQNVPDILALVKRIRAECAGKDIWVWTGYRLDELSDAQKDVVDLINVLVDGKFVQDLKDPALIWRGSSNQVVHHLR
>NZ_CP023529.1|WP_059179989.1|3971712_3973623_+|BglG-family-transcription-antiterminator
MRFPNQRLAQLFDLLQNETLPQDELAQRLSVSTRTVRADITALNALLASHGAQFILSRGNGYQLKIDDAARYQSLQDSRPRALRIPRTGQERVHYLVVRFLTAAFSLKLEDLADEWFVSRATLQSDMVDVREWFHRYNLTLETRPRHGMKLFGSEMSVRACLTDLLWELAQQDSLNPLVTEIALNVGVPEQLVGVLHDTLTRHHIRLTDEGELFVRLYCAVSVRRIGEGYPLPEFNAEDVEENVRAAARDIAAAISQLADKALSPSEENWLCVHLASRQIQEIAPSAINADDDEALVNYILRYINTHYNYNLLNDAQLHADLLTHIKTMITRVRYQIMIPNPLLENIKQHYPMAWDMTLAAVSGWGKYTPYIISENEIGFLVLHIGVGLERHYNVGYQRQPRVLLVCDAGNAMARMIEAVLQRKYPQIDVTRTVTLREYELAENISEDFVISTARISEKAKPVVLIAPFPTDYQLEQIGKLVLVDRTRPWMLEKYFDAAHFRVINKPVDQQTLFQELCSQLEAEGFVGAEFLDSVVEREAIVSTMLGDGIALPHSLGLMAQKTVVYTVLAPQGIQWGDETAHVIFLLAISKSEYEEAMAIYDIFVTFLRERAMTRLCACHDFDEFNAVAMESLSRF
>NZ_CP023529.1|WP_059179988.1|3970547_3971693_+|lactonase-family-protein
MHTHHLLAASLSLLATAAVAQPQYAWVGTYNPNGEGLYRFTVDPQTGALDHKTRASTLANAAQLTVSFDGKTLYLASEVEQGVVQALRIGDNGELSALNQVASGGAGPVYLSLTPNGRHLLVANYVSGSIAVLPVKSDGSLGEATDTHQDRGEPGAAAPEAAVEGSFAISDHNGPHAHMIAADPSGKFVFSTDLGLDRIYQYRFDDRSGKLTPNDPPFINASSKGAGPRHFVFTPKGDGLWLINEEASTLTHYSLDSTSGTLKEGKTISALPNAYKGTSFAAGLVLSRDGKQLYVANRLHNSIAHFTVTADGALTHQNDVWTRGDYPRTLTLDNQGRWLYVMNQRSDNITRFRVEPDGKLRFEPDYTPVGSPSQMVISPGP
>NZ_CP023529.1|WP_059179987.1|3969490_3970231_+|KDGP-aldolase-family-protein
MKLTPNFYRDRVCLNVLAGSKANASAIYEAAEGHVLVGVLSKNYPDVDSAVADMREYAALIDNALSVGLGAGDPNQSAMVSEISRQIQPQHVNQVFTGVATSRALLGQNDSVVNGLVSPTGTVGMVKISTGPLSSNAPDGIVPVETAIALLKDFGGSSIKYFPMGGLACRDEYKAVAEACAKHDFWLEPTGGIDLENIEAILQIALDAGVSKIIPHIYSSIIDKTTGDTRPEDVRTLLDITKKLVK
>NZ_CP023529.1|WP_059179986.1|3968375_3969494_+|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase
MSSIYEKYHLKQVINTSGRMTALGVSTPRPEVVQAAMDGMNQYFEMKDLVNKTGEYIAKLLDVEGATVVSCASAGIAQSVAAVLVKESDWLLENLHVTPIENNEIVLPKGHNVNFGAPVGTMVALGGGKMVEAGYANECSADQLAAAITPRTAAILYIKSHHCVQKSMLSVEQAAVVARKHDLPLIVDAAAEEDLHVYYRSGADLVIYSGAKAIEGPTSGLVIGKTQYVEWVKRQTAGIGRAMKVGKEGILGLTCAIEHYLTATKESGAEMVAKMTPFIDALNTLNGVTARVVWDSAGRDIARSEIKFDEAATGVGTGDLVNALKQGEYAIYFRGYKANEGIIEADVRSVTADQLEIVYRRIREVLGQEKNA
>NZ_CP023529.1|WP_059179995.1|3985223_3987608_+|beta-N-acetylhexosaminidase
MLRYSLLTAGLLLGSSALAAPAGDLPLMPWPASVERPSTQGALILNDTLSVSVSGDDLGDAVDRLRQRIALQTGWTLQPQAVNPDKPTIRIAIAKKVTPQPLPDSDESYTLTVDANGVNIAANTRFGALRAMETLLQLIQNGAENTSLPWVKIDDAPRFPWRGLLLDSARHFIPLEDIKRQIDGMAAAKLNVLHWHLTDDQGWRFTSKRYPKLTQLASDGLFYTPEQMRDIVRYATARGVRVVPEIDMPGHASAIAVAYPELMSAPGPYAMERHWGVLKPVLDPTKEATYAFAEAIVSELAAIFPDPYLHIGGDEVDDTQWKENKVIQQFMRDNKLADSHALQAYFNRKLETILEKNHRQMVGWDEIYHPDLPKSILIQSWQGQDALGEVAKQGYKGILSTGFYLDQPQSTAYHYRNEIVPQGLNGVDIIGDNDSAQSWTFTMPRLKGKPVEGSFTLVKAVSGWRGFIDFNGKSRRAVNDIAWRDDNQVTFTVDTWMGETRPVVNVANDKLTGYFLVGNARYPISGARLDDIPKGTPPVVPDANQQANLMGGEAALWAENVVAPVLDIKLWPRAFAVAERLWSAQDVKDVDNMYGRLQAMDSWTTVSVGLQQHSQQQAYFTRLANTTETLPLQILSQALEPAQYYTRQHLKFQAGNYHQFEPLNRYADALSAESNTVRQMNKWAERLVSDAEDSESAEALRHVFTRWQSNTSDAQALSENNYQLKAITPIIQEVDKLASIGLRLTDLVARQGTLDDKEIASIQKELDKAAEIHDEVVIAAVYPVETLLRATRNQ
>NZ_CP023529.1|WP_059179996.1|3988570_3989368_+|tetratricopeptide-repeat-protein
MSTLNTENKIKITELIMVFIATLPMGIANILITKSQNDERLAFERQNAQSILSIQNKELFIKSAEQGLNSQKLDIDFLRTSYEECQKDGELSIGKIKSYADAYYSSSEKKNIMIAKVQTNCLSKNNNQSVDSQDKPTYSIEHYKSLGFNYLQNKKFLEAAESFSQATQMTPVDASLWNQKAYAQFRAGNYTDAMNSISIALRIGSDNDKVRKYMAINAAKILCAKGDVNDGRNYIQQSINAIPDLLPMVKKDLELGGICKIDLSK
>NZ_CP023529.1|WP_059179997.1|3990021_3990714_+|hypothetical-protein
MYYDSEVIRYLQANKILALKLDQAFTGVGKAVSNQIEMIGSGAQRMLYYTSCFTDEYQDVCQKQKTEDIRFAKGVYHLLEHSDVVYDMLKIYFEEIFKNKTSDHLEHIKQILMSVNVHIAASSLTKAGFALAVAASVAAGMNLSLYMSALVGGRSTKIFVGASLYGIVQKAADGANRLHYIYPAYYSALYTQELEMMYFLIEPLFERAEAFEAQWASDGDIANIITRMVR
>NZ_CP023529.1|WP_059179998.1|3990948_3991428_+|type-VI-secretion-system-tube-protein-Hcp
MSTPAYLWLEDENGSPVIGSCLMPTRLGSIELKSFSHGVTIPVDPSWGKLTGTRVHRPITIVKEFDQTTPLLYRAVCEGRTMKKATIRMYRILESGVESEYFNIVLEDVKITTVSPYLAPNGLSSTHLETLELRYTAIIWKYTEGNIIYRDAWNDRCYA
>NZ_CP023529.1|WP_059179999.1|3991545_3991932_-|2-iminobutanoate/2-iminopropanoate-deaminase
MTKVLATENAPAAIGPYVQGVDLGSMIITSGQIPVNPKTGEVPDDVSAQARQSLENVKAIVESAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
>NZ_CP023529.1|WP_059180000.1|3992111_3992573_-|aspartate-carbamoyltransferase-regulatory-subunit
MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLTLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLTDEQVNQLSLYAPDATVNRIDDYEVVGKSRPNLPERINTVLVCPNSNCISHAEPVSSSFAVKKREKDIALKCKYCEKEFSHYVVLAN
>NZ_CP023529.1|WP_059180001.1|3992585_3993518_-|aspartate-carbamoyltransferase
MNPLYQKHIISINDLSREELELVLDTAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSSNTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGGIPILNAGDGANQHPTQTLLDLFTIQETQGQLENLNIAMVGDLKYGRTVHSLAQALAKFNGNRFYFIAPAALAMPQYILDMLDEKGITWSQHASIEEVMGEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLEGARNNMKVLHPLPRIDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRELTL
>NZ_CP023529.1|WP_072241926.1|3993552_3993657_-|pyrBI-operon-leader-peptide
MLKRVRHHVLPRLKTDAGLPFFFPLLPLFPEPLI
>NZ_CP023529.1|WP_059180002.1|3993757_3994237_-|ArgR-family-transcriptional-regulator
MTEYGDYSPKEQLQLRVCQSLISEKSYLSQEEIRRDLQERGFDSISQSSVSRLLKLLGVIKIRNAKGQKIYSMNPQLRPAPDAARSIAEMVVSVEHNSEFILIHTVAGYGRAVARILDYHQLPEILGVVAGSSIVWVAPRVVKRTPLVHKQINYLLRTH
>NZ_CP023529.1|WP_059180003.1|3994320_3995724_-|YfcC-family-protein
MGKFKFPSAYTILFFLIAVVAALSWVIPAGQYQMAMNTALGKEVPVAGTYAHVAAHPQGIVSVLMAPIAGLYDPVSGQAGAIDVALFILIIGGFLGIVTKTGAIDAGIERVTTRLRGHEEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMLAARFDPVVAASTILLGAGIGTLGSTINPFATVIAANAAGIPFTNGIALRVALLVIGWLICVAWVMRYARRVRQDPSLSIVADKLEENRNHFLGNKSEQSLEFTPVRKVILVIFALAFAVMIYGVAVLGWWMAEISAVFLASAIIVGLIARMSEEELTSTFINGARDLLGVALIIGIARGIVVIMDKGMITHTILHSAEGLVTGLSSVAFINVMYWLEVVLSFLVPSSSGLAVLTMPIMAPLADFANVNRDLVVTAYQSASGIVNLVTPTSAVVMGGLAIARVPYVRYLKWVAPLLGILTVVIMAALSLGALL

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Crispr_ID: NZ_CP023529_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023529_10

4227893-4228028

Orphan

Consensus_repeat	Method
CTGATGCCCTCACCCTGGCCCTCTCCCGCGGGAGAGGGAACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023529_10

>merge|NZ_CP023529|10|4227893-4228028|CRISPRCasFinder
CTGATGCCCTCACCCTGGCCCTCTCCCGCGGGAGAGGGAACAGGCACTAAAAAAGGCAACTGGCGTTGCCTTTTTGCTTTGACCTTGTGCGGACTGATGCCCTCACCCTGGCCCTCTCGCGCGGGAGAGGGAACAG

>NZ_CP023529|10|10|4227893-4228028|CRISPRCasFinder
CTGATGCCCTCACCCTGGCCCTCTCCCGCGGGAGAGGGAACAG	GCACTAAAAAAGGCAACTGGCGTTGCCTTTTTGCTTTGACCTTGTGCGGA
CTGATGCCCTCACCCTGGCCCTCTCGCGCGGGAGAGGGAACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023529.1\|WP_059180090.1\|4236056_4236911_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|234741
NZ_CP023529.1\|WP_012016076.1\|4224032_4224827_-\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|235480
NZ_CP023529.1\|WP_059180237.1\|4226306_4227881_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|236810
NZ_CP023529.1\|WP_059180098.1\|4223638_4224001_+\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP023529.1\|WP_059180093.1\|4232934_4233705_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|237896
NZ_CP023529.1\|WP_059180095.1\|4231241_4231904_-\|carbonate-dehydratase	unknown	unknown	gnl\|CDD\|182460
NZ_CP023529.1\|WP_041689592.1\|4225814_4226162_-\|YacC-family-pilotin-like-protein	unknown	unknown	gnl\|CDD\|370620
NZ_CP023529.1\|WP_059180101.1\|4218076_4218871_-\|DUF2950-family-protein	unknown	unknown	gnl\|CDD\|371539
NZ_CP023529.1\|WP_059180097.1\|4224828_4225698_-\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|234843
NZ_CP023529.1\|WP_059180089.1\|4236922_4237714_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP023529.1\|WP_059180091.1\|4234315_4235563_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213024
NZ_CP023529.1\|WP_059180096.1\|4228064_4230455_-\|glucose/quinate/shikimate-family-membrane-bound-PQQ-dependent-dehydrogenase	unknown	unknown	gnl\|CDD\|274418
NZ_CP023529.1\|WP_059180094.1\|4232011_4232938_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP023529.1\|WP_059180102.1\|4217279_4218011_+\|conjugal-transfer-protein-TraT	unknown	unknown	gnl\|CDD\|184283
NZ_CP023529.1\|WP_012016070.1\|4215659_4217084_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP023529.1\|WP_059180092.1\|4233812_4234253_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NZ_CP023529.1\|WP_012016087.1\|4235564_4235945_-\|aspartate-1-decarboxylase	unknown	unknown	gnl\|CDD\|180090
NZ_CP023529.1\|WP_012016081.1\|4230661_4231198_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|185321
NZ_CP023529.1\|WP_072241938.1\|4220850_4223448_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP023529.1\|WP_059180100.1\|4218881_4220435_-\|DUF3300-domain-containing-protein	unknown	unknown	gnl\|CDD\|378701

Protein	Function_ID	Function_description	E-value
NZ_CP023529.1\|WP_059180090.1\|4236056_4236911_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	4.39781e-162
NZ_CP023529.1\|WP_012016076.1\|4224032_4224827_-\|adenosylmethionine-decarboxylase	gnl\|CDD\|235480	PRK05462, PRK05462, adenosylmethionine decarboxylase.	0
NZ_CP023529.1\|WP_059180237.1\|4226306_4227881_+\|multicopper-oxidase-CueO	gnl\|CDD\|236810	PRK10965, PRK10965, multicopper oxidase; Provisional.	0
NZ_CP023529.1\|WP_059180098.1\|4223638_4224001_+\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	1.18773e-66
NZ_CP023529.1\|WP_059180093.1\|4232934_4233705_+\|ABC-transporter-permease	gnl\|CDD\|237896	PRK15066, PRK15066, inner membrane transport permease; Provisional.	4.14778e-171
NZ_CP023529.1\|WP_059180095.1\|4231241_4231904_-\|carbonate-dehydratase	gnl\|CDD\|182460	PRK10437, PRK10437, carbonic anhydrase; Provisional.	1.92649e-167
NZ_CP023529.1\|WP_041689592.1\|4225814_4226162_-\|YacC-family-pilotin-like-protein	gnl\|CDD\|370620	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS). This family comprises lipoproteins from four gamma proteobacterial species: PulS protein of Klebsiella pneumoniae (P20440), the OutS protein of Erwinia chrysanthemi (Q01567) and Pectobacterium chrysanthemi, and the functionally uncharacterized E. coli protein EtpO. PulS and OutS have been shown to interact with and facilitate insertion of secretins into the outer membrane, suggesting a chaperone-like, or piloting function for members of this family. In the pilotin from this four-helix protein from enterohemorrhagic Escherichia coli, the straight helix alpha2, the curved helix alpha3 and the bent helix alpha4 surround the central N-terminal helix alpha1. These helices create a prominent groove, mainly formed by side chains of helices 1,2 and 3 suggesting this groove is important as a binding site.	8.01196e-08
NZ_CP023529.1\|WP_059180101.1\|4218076_4218871_-\|DUF2950-family-protein	gnl\|CDD\|371539	pfam11453, DUF2950, Protein of unknown function (DUF2950). This is a bacterial family of uncharacterized proteins.	1.33367e-103
NZ_CP023529.1\|WP_059180097.1\|4224828_4225698_-\|polyamine-aminopropyltransferase	gnl\|CDD\|234843	PRK00811, PRK00811, polyamine aminopropyltransferase.	8.2004e-176
NZ_CP023529.1\|WP_059180089.1\|4236922_4237714_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	7.58398e-159
NZ_CP023529.1\|WP_059180091.1\|4234315_4235563_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213024	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins. This family contains an uncharacterized protein yadE from Escherichia coli and its bacterial homologs. Although its molecular function remains unknown, yadE shows high sequence similarity with the catalytic NodB homology domain of outer membrane lipoprotein PgaB and the surface-attached protein intercellular adhesion protein IcaB. Both PgaB and IcaB are essential in bacterial biofilm formation.	1.95805e-66
NZ_CP023529.1\|WP_059180096.1\|4228064_4230455_-\|glucose/quinate/shikimate-family-membrane-bound-PQQ-dependent-dehydrogenase	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP023529.1\|WP_059180094.1\|4232011_4232938_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.86245e-102
NZ_CP023529.1\|WP_059180102.1\|4217279_4218011_+\|conjugal-transfer-protein-TraT	gnl\|CDD\|184283	PRK13731, PRK13731, complement resistance protein TraT.	1.08124e-125
NZ_CP023529.1\|WP_012016070.1\|4215659_4217084_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP023529.1\|WP_059180092.1\|4233812_4234253_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	8.59528e-38
NZ_CP023529.1\|WP_012016087.1\|4235564_4235945_-\|aspartate-1-decarboxylase	gnl\|CDD\|180090	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional.	1.06166e-75
NZ_CP023529.1\|WP_012016081.1\|4230661_4231198_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|185321	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional.	6.64877e-120
NZ_CP023529.1\|WP_072241938.1\|4220850_4223448_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP023529.1\|WP_059180100.1\|4218881_4220435_-\|DUF3300-domain-containing-protein	gnl\|CDD\|378701	pfam11737, DUF3300, Protein of unknown function (DUF3300). This hypothetical bacterial gene product has a long hydrophobic segment and is thus likely to be a membrane protein.	3.13326e-101

>NZ_CP023529.1|WP_059180237.1|4226306_4227881_+|multicopper-oxidase-CueO
MQRRDFLKYSAVLGAASALPLWSRTAFAVDRPALPIPDLLAADARSRIQLVVQSGKSAFGPHNATTWGYNGNLLGPALQLRRGKEVTVNIHNTLAEETTLHWHGLEVPGDVDGGPQGIIKPGGQRTVTFTPDQRAATCWFHPHQHGKTGHQVAMGLAGLVLIEDDESRLLRLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPKGWLRLRLLNGCNARSLNFATSDRRPMYVIASDGGLLAEPVKVSELPMLMGERFEVLVDISDGKPFDLLTLPVSQMGMAVAPFDKPHPVLRIQPLLVTASGEMPDTLAAMPALPSLEGLTQRKLQLSMDPMLDMMGMQALMNKYGDQAMAGMQHGQMMGHMNMDHGKMDHGNMGGMNHGDHKFDFHNANRINGKAFDMDTPMFAAAKGQYERWVISGEGDMMLHPFHIHGTQFRILSENGKAPAAHRTGWKDTVRVEGGVSEVLVKFEHDAPKEFAYMAHCHLLEHEDTGMMLGFTV
>NZ_CP023529.1|WP_041689592.1|4225814_4226162_-|YacC-family-pilotin-like-protein
MKTFFRTILFGSLMAMCANSYALSENEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDSFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
>NZ_CP023529.1|WP_059180097.1|4224828_4225698_-|polyamine-aminopropyltransferase
MTDKTVWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVSRHKSIETITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFTLVIDDGVNFVNQTNQTFDVIISDCTDPIGPGATLFTSSFYEGCKRCLNPGGIFVAQNGVCFLQQDEAIDSHRKLSHYFGDVSFYQAAIPTYYGGIMTFAWATDNDVLRHLSTEIIAARFHQTHLKCRYYNPAVHTAAFALPQYLQDALSSKEVS
>NZ_CP023529.1|WP_012016076.1|4224032_4224827_-|adenosylmethionine-decarboxylase
MKKLKLHGFNNLTKSLSFCIYDICYVKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPQLIDPTEHPGPLPEAVVAHLDKSHICVHTYPESHPEAGLCTFRADIEVSTCGVISPLNALNYLIHQLESDIVTIDYRVRGFTRDINGMKYFIDHEINSIQNFMSEDMKGLYDMMDVNVYQENIFHTKMLLKEFDLKHYMFHTQPEDLSEEERKVITDLLWKEMREIYYGRNIPAV
>NZ_CP023529.1|WP_059180098.1|4223638_4224001_+|YacL-family-protein
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAARTIKGSERSWQRIGHEYTLWMDGEEVMVRANQMEISGDEMEEGMSYYDEESFSLCGVEDFLQVVKAYREFMQQK
>NZ_CP023529.1|WP_072241938.1|4220850_4223448_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGIVPKPLDATQMAALVELLKNPPAGEEEFLLDLLINRVPPGVDEAAYVKAGFLAAIAKSEATSPLVTPEKAIELLGTMQGGYNIHPLIDALESETLAPIAAKALSQTLLMFDNFYDVEEKAKAGNRYAKQVMQSWADAEWFLNRPALAEKMTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIVPDQPGAVGPIAQIEELAKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVNNLNMGDVIDVYPFKGEVRNHETNELLATFELKTDVLVDEVRAGGRIPLIIGRGLTTKAREALGLPHSDIFRQAKDVAESDRGYSLAQKMVGRACGVTGVRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSSDLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKINIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNQEPIIEYLTSNIVLLKWMIAEGYGDRRTLERRVQGMEKWLADPQLLEADADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDTHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTFVAQVDKTAVDTYRYLNFDKLSQYTEKADGVIFQTAV
>NZ_CP023529.1|WP_059180100.1|4218881_4220435_-|DUF3300-domain-containing-protein
MKLPFKPHLIVLLCSAGLLAASGVMFVKSRAPESVSTPSAATPPAAPQPVAQPPVAVVAPTYTAAQIDQWTAPIALYPDALLSQILMASTYPANVIQAAQWSQDNPKMQGDAAIQAVSGQPWDPSVKSLVAFPQLMSLMGENPPWVQNLGDAFLAQPKDVMDSVQRLRLLAQQTGALQSTPQQTVTTEKKKEPAQTANATSNATVAATNPTMIKIESADPQVVYVPTYNPATVYGTWPNASYPPVYLPPSPGEQFTDSLVKGLGFSLGVATTYAIFSNIDWDDDDDWDHHHHDNDYDRNGGYNRNGNNNININVDNFNKISGDRLTDAHRNWQHNPAYRDGVPYPTTPLNNRFHPTNTATGLSTTQQKPANRDSQRQAALAQVQQSTGKTLSQTQRPATKDAQRQASSAQLKQISQRNNYRGYDNTKPQTTQRAANKVQRENRQTTSQRQEKRVSPTLQQRNTQPRANALSGNDSRSGNWQSQQQRGSQSRQMASRPHQPARQMPAGRTEHRELRHR
>NZ_CP023529.1|WP_059180101.1|4218076_4218871_-|DUF2950-family-protein
MKKKILGGMILLMVSTFAIAQQHFSTPEQATDALAKAISEQNEREMKNLLGDDWRNFLPPEGVDPDAVDRFVRDWKVSHSTVIAGDIAHLVVGDSNWQLPIPVVKGASGWQFDMRKAADEILTREIGRNELAAIEALHAYVDAQQSYYALNQTFAQKIISSEGKKDGLYWPAAPGEAPSPLGPAFSPQVPGTGYHGYRFRILPDNNNGFAMIAWPVSYGQTGVMSFVINQDDNVYQANLGEETQQRAEATAAYPQDKNWQLVTP
>NZ_CP023529.1|WP_059180102.1|4217279_4218011_+|conjugal-transfer-protein-TraT
MSLKKVAVIGLVAAALTLTGCGAMTTAVKKRNLEVKTQMSETIWLEPSSEKTVYIQVKNTSDKDMSNLQTLLANDLSAKGYKVTNSPESAYYWVQANVLKANKMDLRETQGYLKTGYEGAAVGAALGAGITAYNSSSSGAALGVGLAAGLIGMAADAMVEDVNYTMVTDLQISERSKAKVTTDNIAALRQGTSGVKLQTSSEQGDRAKYQTRVVSNANKVNLKFEEAKPVLEAQLAKSVANIL
>NZ_CP023529.1|WP_012016070.1|4215659_4217084_+|dihydrolipoyl-dehydrogenase
MSTEIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKALADHGIVFGEPKTDIDKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIELPFIPHEDPRVWDSTDALELKSVPKRLLVMGGGIIGLEMATVYHALGSEIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVSMEGKKAPGEAQRYDAVLVAIGRVPNGKNLDAGAAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGVTKLIFDKETHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNAKAKKK
>NZ_CP023529.1|WP_059180096.1|4228064_4230455_-|glucose/quinate/shikimate-family-membrane-bound-PQQ-dependent-dehydrogenase
MAETKVQQSRLLVTLTAAFAAFCALYLLIGGVWLVALGGSWYYPIAGLVMVGVTVLLLKGKRSALWLYAALLLVTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLRVPSSGAVAALVVSLLITGGMLTWAGFNDPQEVKGTLSADSTPAAAISDVADGDWPAYGRNQEGQRYSPLKQINADNVKNLKEAWVFRTGDLKQPNDPGELTNEVTPIKVGNMLYLCTAHQRLFALDAATGKEKWHFDPQLNSNPSFQHITCRGVSYHEARADNASPEVVADCPRRIMLPVNDGRLFAINAETGKLCETFGNKGILNLQTNMPDTTPGLYEPTSPPIITDKTIVIAGSVTDNFSTRETSGVIRGFDVNTGKLLWAFDPGAKDPNAIPADEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASAIVALNATTGKLAWSYQTVHHDLWDMDMPSQPTLADITVNGKTVPVIYAPAKTGNIFVLDRTNGKLVVPAPEKPVPQGAAKGDYVTKTQPFSDLSFRPKKDLTGADMWGATMFDQLVCRVMFHQLRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNRQVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGSGTEAGIQPQYGVPFGVTLNPFLSPFGLPCKQPAWGYISALDLKTNQVVWKKRIGTPQDSMPFPMPIPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVDGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK
>NZ_CP023529.1|WP_012016081.1|4230661_4231198_+|hypoxanthine-phosphoribosyltransferase
MKHTVEVMIPEAEIKARIAELGRQITERYQDSGSEMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLRGPKSLAICTLLDKPSRREVDVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYVGKVVLLDE
>NZ_CP023529.1|WP_059180095.1|4231241_4231904_-|carbonate-dehydratase
MNDIDTLISNNALWSKMLIEEDPGFFEKLAQAQNPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAIENPELGLIDNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMRSAWKRGQKVSVHGWAYGIHDGLLRNLEVTATNRETLEQRYRQGVSNLTKKHVNHK
>NZ_CP023529.1|WP_059180094.1|4232011_4232938_+|ABC-transporter-ATP-binding-protein
MTIALELEQLKKVYPGGVQALRGIDLKVEAGDFYALLGPNGAGKSTTIGIISSLVNKSSGKVAVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERHDAVARSEKYLKQLDLWEKRDERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKNLLSKLKSETFILDLASKSPLPTLEGYQYRLVDTSTLEVEVLREQGINSVFSQLSAQGVQVLSMRNKANRLEELFVSLVHDKRGEQA
>NZ_CP023529.1|WP_059180093.1|4232934_4233705_+|ABC-transporter-permease
MTHLYWVALKSIWAKEINRFMRIWIQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFTYMQFIVPGLIMMAVITNAYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCVGILVTAISLFFVPFQVHSWLFVALTLLMTAILFSLAGLLNAVFATTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQALSHLNPIVYMISGFRFGFLGITDVPLFTTVAVLGVFIIAFYILCWYLIQRGRGLRS
>NZ_CP023529.1|WP_059180092.1|4233812_4234253_+|PTS-sugar-transporter-subunit-IIA
MLGWVITCHDDNAQAFLERLEKNFGPLPQCLAVNYWPGLSTNMLSRMMCDAQHQTDTGEGVIFLTDKSGAAPYRAAALLSHKHENCEVISGINYELLEMMYPLRETLSSAEFRDMIVGQEIPGVSSLWHQQQKNPPFVLLHDLYKN
>NZ_CP023529.1|WP_059180091.1|4234315_4235563_+|polysaccharide-deacetylase-family-protein
MLTRIIFLLLLLVSGGVSASLLSQQGLPAQYMQTTEDAAIWAQVGNNVVNVGNVRAGQIIAVVPTNADYYEFRFGFGTGFIDKGHLENVQGKQRVEDSLGDLNKPLSNQNLITWKDTPVYNAPNNGSAPFGTLSDNLRYPILNKLKDRLNQTWFQIRIGNRLAWVSSLDAQEDSGIPVITYHHILHDEENTRFRHTSTTTSVRAFNNQMTWLRDQGYTTLTMYQLEGYVRNKMNLPARAVVITFDDGLKSVSRYAWPILKEYGFKATAFIISSRIKGHPQKWDPKSLQFMSVSELKEIQDVFDIQSHTHFLHRVDANKHPILLSRSYHVILFDFERSRRALAQFNPRVLYLSYPFGGYDDKAVKAANDAGFHLAVTTVKGKVKPGDNPFLLKRLYILRTDSLETMSRLISNQPQG
>NZ_CP023529.1|WP_012016087.1|4235564_4235945_-|aspartate-1-decarboxylase
MIRKMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGNRFSTYAIAGERGSKIISVNGAAAHCASVGDIVIIASFVMMSDEEARRWQPKVAYFEGDNEMKRTAKAIPVQVA
>NZ_CP023529.1|WP_059180090.1|4236056_4236911_-|pantoate--beta-alanine-ligase
MLIIETLPLLRQHIRRLRQEGKRIALVPTMGNLHDGHMKLVDEARARADVVVVSIFVNPMQFDRADDLARYPRTLQEDCEKLKKRHVDFVFSPAPSDIYPQGTEGATYVDVPGISTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGYDIEIVGVPIVRAKDGLALSSRNGYLTADQRKIAPGLCKVMNAMAEQLKAKELTTEEIVALAEQELNDKGLRADDIQIRDADTLVELSDTSKRAVILVAAWLGQARLIDNKVVELTQ
>NZ_CP023529.1|WP_059180089.1|4236922_4237714_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKPTTISLLQKCKQEKKRFATITAYDFSFAKLFAEEGINVMLVGDSLGMTVQGHDSTLPVTVDDIAYHTHAVRRGAPHCLLLSDLPFMGYATPEQAFENAAAVMRAGANMVKIEGGAWLVDTVKMLTERAVPVCGHLGLTPQSVNVFGGYKVQGRGDAGQILLDDALALEAAGIQLLVLECVPVELAKRVTDALTIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLSEAGDMRAAVRQYIADVESGVYPGEEHSFH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023529_3	3.1\|861009\|38\|NZ_CP023529\|CRISPRCasFinder	861009-861046	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947

1. spacer 3.1|861009|38|NZ_CP023529|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaaaatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.******.*****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

393858 : 412652

Salmonella_phage(72.22%)

integrase,tail

attL 393269:393287|attR 413297:413315

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
393269:393287	attL	NA	NA	NA	NA
WP_059178526.1\|393858_394911_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	2.0e-102	54.9
WP_059178525.1\|394994_396356_-	KAP family NTPase	R9TRQ8	Vibrio_phage	2.5e-20	29.2
WP_059178524.1\|396569_397139_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	6.3e-42	46.9
WP_004223867.1\|397264_397486_+	hypothetical protein	NA	NA	NA	NA
WP_059178523.1\|397518_398028_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	3.1e-72	81.0
WP_072241800.1\|398035_398236_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	2.8e-29	89.2
WP_059178522.1\|398199_398541_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.2e-48	87.6
WP_059178521.1\|398608_398845_+	DUF2732 domain-containing protein	Q6K1F6	Salmonella_virus	2.2e-12	63.1
WP_059178520.1\|398844_399072_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	3.0e-27	78.7
WP_059178519.1\|399091_401473_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.3
WP_059178517.1\|402075_402891_+	hypothetical protein	NA	NA	NA	NA
WP_059178516.1\|402892_403594_+	hypothetical protein	S5W9H2	Leptospira_phage	9.6e-08	32.1
WP_096759576.1\|404503_404947_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	3.5e-56	81.8
WP_059178514.1\|405120_406020_+	hypothetical protein	NA	NA	NA	NA
WP_059178513.1\|406016_406361_+	hypothetical protein	NA	NA	NA	NA
WP_059178512.1\|406532_407645_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.7e-198	92.7
WP_059178511.1\|407654_408170_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	1.6e-89	95.3
WP_059178510.1\|408223_408526_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	3.3e-42	94.0
WP_072241798.1\|408540_410790_+\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	1.9e-251	66.8
WP_059178508.1\|410786_411272_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.2e-71	86.9
WP_059178507.1\|411268_412369_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.3e-180	90.7
WP_012016760.1\|412436_412652_+	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	1.2e-22	70.8
413297:413315	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1274331 : 1293544

Shigella_phage(22.22%)

holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059179013.1\|1274331_1274913_+	hypothetical protein	A0A125RNP0	Pseudomonas_phage	5.6e-62	65.0
WP_059179014.1\|1275111_1275429_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.1e-31	59.6
WP_059179016.1\|1275780_1276143_+	GtrA family protein	U5P0S6	Shigella_phage	6.4e-48	80.8
WP_059179017.1\|1276139_1277057_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	1.5e-157	89.1
WP_133115695.1\|1277231_1278713_+	hypothetical protein	B9UDL6	Salmonella_phage	1.9e-77	37.0
WP_059179019.1\|1278744_1280715_-	hypothetical protein	B1GS50	Salmonella_phage	7.8e-55	64.4
WP_059179020.1\|1281612_1282215_-	hypothetical protein	G8C7P2	Escherichia_phage	6.0e-75	79.8
WP_059179021.1\|1282292_1282727_+	hypothetical protein	NA	NA	NA	NA
WP_082691922.1\|1282709_1282823_-\|terminase	terminase small subunit	NA	NA	NA	NA
WP_059179022.1\|1282843_1283389_+	hypothetical protein	S4TR57	Salmonella_phage	8.2e-23	40.8
WP_059179023.1\|1283397_1283589_-	hypothetical protein	NA	NA	NA	NA
WP_059179024.1\|1283703_1283934_-	hypothetical protein	NA	NA	NA	NA
WP_059179025.1\|1284167_1284554_-	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	3.5e-12	39.5
WP_096759583.1\|1284550_1284994_-	lysozyme	A0A0M4R365	Salmonella_phage	1.3e-47	67.8
WP_059179027.1\|1284977_1285319_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.4e-28	53.3
WP_128131049.1\|1285480_1285975_-	hypothetical protein	NA	NA	NA	NA
WP_096759584.1\|1286324_1286597_+	hypothetical protein	NA	NA	NA	NA
WP_059179030.1\|1286690_1287380_-	antiterminator	I6PDF8	Cronobacter_phage	2.1e-55	49.8
WP_059179031.1\|1288249_1288585_+	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	5.7e-43	84.8
WP_059179032.1\|1288681_1288885_+	hypothetical protein	NA	NA	NA	NA
WP_059179034.1\|1289248_1289764_+	hypothetical protein	R9TNF9	Aeromonas_phage	4.4e-10	36.5
WP_059179035.1\|1289804_1290059_+	excisionase family protein	A0A286S2A4	Klebsiella_phage	8.8e-12	44.3
WP_059179036.1\|1290090_1291368_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	1.8e-137	55.8
WP_072241842.1\|1291424_1292378_+	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	1.4e-129	68.5
WP_059179038.1\|1292386_1293544_+	hypothetical protein	A0A125RNN9	Pseudomonas_phage	4.0e-59	38.4

DBSCAN-SWA_3

1314937 : 1323904

Salmonella_phage(28.57%)

tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059179053.1\|1314937_1315609_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	9.0e-80	60.9
WP_059179054.1\|1315843_1316455_-	hypothetical protein	NA	NA	NA	NA
WP_059179055.1\|1316571_1317840_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	2.1e-231	92.7
WP_059179056.1\|1317843_1318263_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	5.0e-36	58.3
WP_059179057.1\|1318415_1318985_-	recombinase family protein	A0A1S6L009	Salmonella_phage	3.3e-75	78.1
WP_072241844.1\|1319115_1319823_+	hypothetical protein	K7PM99	Enterobacterial_phage	2.3e-70	58.8
WP_174521008.1\|1319788_1320895_-\|tail	tail fiber domain-containing protein	K7PM99	Enterobacterial_phage	8.2e-78	61.7
WP_059179058.1\|1321021_1321384_+	hypothetical protein	NA	NA	NA	NA
WP_059179059.1\|1322896_1323904_-\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	8.6e-34	40.2

DBSCAN-SWA_4

1327859 : 1344725

Enterobacteria_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059179064.1\|1327859_1328675_-	antitermination protein	K7P7B9	Enterobacteria_phage	3.3e-124	80.8
WP_059179065.1\|1328671_1328812_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	5.2e-06	71.1
WP_059179144.1\|1328808_1329414_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	1.8e-55	65.8
WP_072241846.1\|1329416_1329623_-	hypothetical protein	H6WRY8	Salmonella_phage	2.2e-21	65.2
WP_059179066.1\|1329622_1330225_-	DUF1367 family protein	S4TTI0	Salmonella_phage	2.1e-96	84.0
WP_072241848.1\|1331257_1332598_+	DUF4433 domain-containing protein	NA	NA	NA	NA
WP_059179068.1\|1332594_1333710_+	macro domain-containing protein	A0A2D1GR68	Pseudomonas_phage	1.6e-25	42.1
WP_059179069.1\|1334646_1335336_-	phage replication protein	G8C7U6	Escherichia_phage	3.1e-83	62.9
WP_059179070.1\|1335332_1336250_-	replication protein	K7PGZ0	Enterobacteria_phage	1.0e-110	72.0
WP_059179071.1\|1336334_1336874_-	toxin YdaT domain-containing protein	M9NZI6	Enterobacteria_phage	4.6e-58	66.7
WP_059179072.1\|1339483_1340524_+	recombinase RecT	K7PKR8	Enterobacteria_phage	1.9e-148	72.4
WP_059179073.1\|1340562_1340805_+	DUF4060 family protein	K7PHF4	Enterobacteria_phage	1.3e-33	93.6
WP_022651304.1\|1340869_1341082_+	excisionase family protein	A0A0U2RY08	Escherichia_phage	4.3e-20	63.4
WP_059179074.1\|1341083_1342322_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	2.0e-170	70.7
WP_059179075.1\|1342371_1343307_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.4e-139	93.8
WP_059179076.1\|1343351_1344725_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.8e-50	31.6

DBSCAN-SWA_5

1775274 : 1782798

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059179556.1\|1775274_1775811_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-49	56.1
WP_059179802.1\|1775814_1776693_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	1.1e-106	64.8
WP_059179555.1\|1776739_1777639_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.3e-27	35.0
WP_059179554.1\|1777638_1778724_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-100	53.4
WP_059179553.1\|1779102_1779999_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	3.7e-44	41.5
WP_059179552.1\|1780216_1781212_-	NAD-dependent epimerase/dehydratase family protein	Q6VZT4	Canarypox_virus	6.8e-07	25.1
WP_059179551.1\|1781400_1782798_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	5.8e-20	33.6

DBSCAN-SWA_6

1838329 : 1864377

Escherichia_phage(27.27%)

terminase,tail,tRNA,capsid,portal,integrase,plate,lysis

attL 1839840:1839861|attR 1864462:1864483

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_059179506.1\|1838329_1839691_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	3.0e-199	89.9
1839840:1839861	attL	NA	NA	NA	NA
WP_034496757.1\|1840087_1841062_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_016246480.1\|1841190_1841970_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_016246481.1\|1842242_1842731_-	isochorismatase family protein	NA	NA	NA	NA
WP_059179505.1\|1842776_1843985_-	MFS transporter	NA	NA	NA	NA
WP_072241892.1\|1844405_1844627_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	7.6e-28	74.0
WP_096759536.1\|1845575_1845971_-\|plate	baseplate J-like protein	A0A0F7LCQ9	Escherichia_phage	1.2e-50	81.2
WP_059179184.1\|1845976_1846327_-	GPW/gp25 family protein	A0A0M4RE59	Salmonella_phage	4.7e-40	71.6
WP_059179185.1\|1846323_1846965_-\|plate	phage baseplate assembly protein V	S4TUB5	Salmonella_phage	2.0e-92	79.3
WP_059179186.1\|1848262_1849054_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_059179187.1\|1849274_1849739_-	phage virion morphogenesis protein	O80313	Escherichia_phage	9.7e-49	66.9
WP_059179188.1\|1849731_1850199_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	1.0e-61	72.3
WP_059179189.1\|1850294_1850729_-\|lysis	LysB family phage lysis regulatory protein	A0A218M4K2	Erwinia_phage	8.8e-44	69.1
WP_059179190.1\|1850710_1851139_-	hypothetical protein	NA	NA	NA	NA
WP_059179191.1\|1851135_1851648_-	lysozyme	A0A218M4K3	Erwinia_phage	8.1e-81	86.5
WP_059179192.1\|1852240_1853335_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	1.1e-167	82.8
WP_059179193.1\|1853391_1854246_-\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	4.3e-119	75.4
WP_059179194.1\|1854412_1856182_+\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	7.4e-299	85.0
WP_059179195.1\|1856183_1857200_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	9.9e-171	85.1
WP_156421720.1\|1857432_1857621_+	hypothetical protein	NA	NA	NA	NA
WP_059179197.1\|1857713_1857905_-	hypothetical protein	S4TRZ0	Salmonella_phage	4.9e-23	85.7
WP_059179198.1\|1857903_1858335_+	hypothetical protein	S4TUD6	Salmonella_phage	3.4e-72	95.1
WP_059179199.1\|1858400_1858616_-	hypothetical protein	Q6K1F0	Salmonella_virus	6.3e-19	67.6
WP_059179200.1\|1858803_1861086_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	75.8
WP_059179201.1\|1861075_1861351_-	DUF5405 family protein	S4TP00	Salmonella_phage	1.2e-25	60.4
WP_072241869.1\|1861372_1861597_-	hypothetical protein	NA	NA	NA	NA
WP_059179202.1\|1861599_1861821_-	DUF2732 family protein	NA	NA	NA	NA
WP_059179203.1\|1861885_1862386_-	hypothetical protein	M1SV55	Escherichia_phage	7.4e-79	84.3
WP_059179204.1\|1862552_1862828_-	regulatory phage cox family protein	Q1JS60	Enterobacteria_phage	1.2e-41	85.7
WP_059179205.1\|1862949_1863249_+	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	3.9e-35	70.7
WP_059179206.1\|1863363_1864377_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	2.5e-166	84.6
1864462:1864483	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4003841 : 4011074

Enterobacteria_phage(85.71%)

integrase

attL 4003655:4003671|attR 4015525:4015541

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4003655:4003671	attL	NA	NA	NA	NA
WP_059180011.1\|4003841_4005101_+\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	6.9e-81	42.4
WP_059180012.1\|4005261_4007595_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	81.1
WP_059180013.1\|4007609_4007930_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_059180014.1\|4007926_4008154_-	hypothetical protein	NA	NA	NA	NA
WP_059180015.1\|4008150_4008702_-	ash family protein	Q7M2A7	Enterobacteria_phage	4.2e-35	71.3
WP_059180016.1\|4008698_4008965_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	3.7e-29	70.5
WP_164841560.1\|4009295_4009475_-	hypothetical protein	NA	NA	NA	NA
WP_059180017.1\|4009516_4010251_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-65	54.3
WP_059180018.1\|4010247_4010511_+	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	5.9e-19	56.8
WP_059180019.1\|4010507_4011074_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	8.2e-58	64.3
4015525:4015541	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023529

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection