CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_AP018263	Calothrix sp. NIES-4071 plasmid plasmid8 DNA, complete genome	0 crisprs	NA	0	0	0
NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	2 crisprs	csa3,TnpB_regular.1,cas3,Cas9_archaeal	0	6	0
NZ_AP018261	Calothrix sp. NIES-4071 plasmid plasmid6 DNA, complete genome	0 crisprs	NA	0	0	0
NZ_AP018255	Calothrix sp. NIES-4071 DNA, complete genome	43 crisprs	RT,DEDDh,csa3,PD-DExK,cas3,cas14k,Cas14b_CAS-V-F,WYL,cas8b5,cas7,cas5,cas6,cas4,cas1,cas2,c2c9_V-U4,TnpB_regular.1,cas8a4,cas14j,DinG,Cas14u_CAS-V,c2c10_CAS-V-U3,cas8b3,c2c8_V-U2	8	28	8
NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	4 crisprs	RT,Cas9_archaeal,c2c10_CAS-V-U3	0	20	1
NZ_AP018258	Calothrix sp. NIES-4071 plasmid plasmid3 DNA, complete genome	0 crisprs	RT	0	0	0
NZ_AP018262	Calothrix sp. NIES-4071 plasmid plasmid7 DNA, complete genome	0 crisprs	NA	0	0	0
NZ_AP018260	Calothrix sp. NIES-4071 plasmid plasmid5 DNA, complete genome	0 crisprs	NA	0	0	0
NZ_AP018259	Calothrix sp. NIES-4071 plasmid plasmid4 DNA, complete genome	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP018255_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_1

179434-179508

Orphan

Consensus_repeat	Method
ATACTGTAACTCCTCCTGTCTTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_1

>merge|NZ_AP018255|1|179434-179508|CRISPRCasFinder
ATACTGTAACTCCTCCTGTCTTAGGAGTTATAAATATAAATACAAATATAGATACTGTAACTCCTCCAGTCTTAG

>NZ_AP018255|1|1|179434-179508|CRISPRCasFinder
ATACTGTAACTCCTCCTGTCTTAG	GAGTTATAAATATAAATACAAATATAG
ATACTGTAACTCCTCCAGTCTTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096683850.1\|188612_189341_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096683851.1\|190539_190941_-\|DUF4188-domain-containing-protein	unknown	unknown	gnl\|CDD\|316352
NZ_AP018255.1\|WP_096683838.1\|167954_168236_+\|pyrroloquinoline-quinone-biosynthesis-peptide-chaperone-PqqD	unknown	unknown	gnl\|CDD\|274818
NZ_AP018255.1\|WP_096683842.1\|175474_175936_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_AP018255.1\|WP_096683843.1\|176504_178193_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_AP018255.1\|WP_096683846.1\|183628_184681_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238363
NZ_AP018255.1\|WP_096683836.1\|165961_166867_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqB	unknown	unknown	gnl\|CDD\|235361
NZ_AP018255.1\|WP_096683835.1\|164741_165953_+\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_AP018255.1\|WP_096693748.1\|187149_187734_-\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_AP018255.1\|WP_096683839.1\|168329_169427_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqE	unknown	unknown	gnl\|CDD\|235397
NZ_AP018255.1\|WP_096683847.1\|184929_186318_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018255.1\|WP_096683848.1\|186419_187121_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_AP018255.1\|WP_096683841.1\|173827_175399_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_AP018255.1\|WP_096683840.1\|169667_172730_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_AP018255.1\|WP_096683853.1\|194104_194773_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226790
NZ_AP018255.1\|WP_096683845.1\|182643_183354_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018255.1\|WP_096683837.1\|166964_167678_+\|pyrroloquinoline-quinone-synthase-PqqC	unknown	unknown	gnl\|CDD\|235353
NZ_AP018255.1\|WP_096693746.1\|172846_173773_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096683849.1\|187765_188578_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096683852.1\|191343_193647_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|100081

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096683851.1\|190539_190941_-\|DUF4188-domain-containing-protein	gnl\|CDD\|316352	pfam13826, DUF4188, Domain of unknown function (DUF4188).	5.23231e-06
NZ_AP018255.1\|WP_096683838.1\|167954_168236_+\|pyrroloquinoline-quinone-biosynthesis-peptide-chaperone-PqqD	gnl\|CDD\|274818	TIGR03859, PQQ_PqqD, coenzyme PQQ biosynthesis protein PqqD. This model identifies PqqD, a protein involved in the final steps of the biosynthesis of pyrroloquinoline quinone, coenzyme PQQ. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.21836e-20
NZ_AP018255.1\|WP_096683842.1\|175474_175936_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.33155e-14
NZ_AP018255.1\|WP_096683843.1\|176504_178193_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	4.68571e-106
NZ_AP018255.1\|WP_096683845.1\|182643_183354_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.15277e-15
NZ_AP018255.1\|WP_096683836.1\|165961_166867_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqB	gnl\|CDD\|235361	PRK05184, PRK05184, pyrroloquinoline quinone biosynthesis protein PqqB; Provisional.	7.7052e-129
NZ_AP018255.1\|WP_096683835.1\|164741_165953_+\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	5.25465e-173
NZ_AP018255.1\|WP_096693748.1\|187149_187734_-\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.000103695
NZ_AP018255.1\|WP_096683839.1\|168329_169427_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqE	gnl\|CDD\|235397	PRK05301, PRK05301, pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.	0
NZ_AP018255.1\|WP_096683847.1\|184929_186318_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.10942e-16
NZ_AP018255.1\|WP_096683848.1\|186419_187121_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	0.000196078
NZ_AP018255.1\|WP_096683841.1\|173827_175399_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.66429e-119
NZ_AP018255.1\|WP_096683840.1\|169667_172730_-\|GAF-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.22848e-43
NZ_AP018255.1\|WP_096683853.1\|194104_194773_-\|hypothetical-protein	gnl\|CDD\|226790	COG4340, COG4340, Uncharacterized protein conserved in bacteria [Function unknown].	1.77871e-104
NZ_AP018255.1\|WP_096683846.1\|183628_184681_-\|hypothetical-protein	gnl\|CDD\|238363	cd00707, Pancreat_lipase_like, Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.	1.25356e-08
NZ_AP018255.1\|WP_096683837.1\|166964_167678_+\|pyrroloquinoline-quinone-synthase-PqqC	gnl\|CDD\|235353	PRK05157, PRK05157, pyrroloquinoline quinone biosynthesis protein PqqC; Provisional.	3.94999e-134
NZ_AP018255.1\|WP_096683852.1\|191343_193647_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	8.86208e-27

>NZ_AP018255.1|WP_096683843.1|176504_178193_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MAPLSVCILVANQTFAQTPPQTPIIPGNKKPNPNIDRFPQPQPIPDPLAPSDQTPIIPTPQQNIPEVPTVKIPVRKIEVIGSTVLSQEEISTITKPFIERTVTLKELIGLANTITQTYLNRGYITSRAVLADQTITNGTVKIIIIEGSLEKIEVVGATRLNPNYIRSRIQLGTGIPLRSDKLESQLRLLKADPLFTNIAASLKAGTGLGKSILTVKVTEASPISGFASIDNYSPPAVGSERVGGIISYRNLTGIGDELSAYYYRTTPGGANSFDFAYRVPLNAMNGTLQLRYAPSDSKIIEGDIAKLNISANSQLYEVSYRQPLVRTPATEFALSLGFTVQDGQTFLDGVGVGFGNGASDQGNSKTRVLKIGQDYIRRDLQGAWAVQSQFSIGLGILDATINSDSIPDGRFFSWLGQIQRVQRLNRDNVLIAQVSLQLTPDTLLSSQQFVIGGGLSLRGYRQNARLGDNGLRISLENRIAIERNNNGQPNLQLAPFIDVGAVWNNNNNIEQKILASTGLGLLWEPLPNLLVKLDYAVPLVNLRDKGNNAQDEGLNFSIGYNF
>NZ_AP018255.1|WP_096683842.1|175474_175936_+|MarR-family-transcriptional-regulator
MTITKTSPQQGAAKIIEAVPVITQFFRVTMRRHASSLPESLSVSQFRTLGFLERYPGASLSQLAEHLEVTKATASNLTERLVQKKLVTRNENPQERRQINLKLTEAGEYHLEQIKMLISTNISTILNELPQEQLETVVSGLTILSTAFAQAID
>NZ_AP018255.1|WP_096683841.1|173827_175399_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MIQDKKAKTGGNPGWLKWAIAVTASLGAILEVIDTSIVNVALTDMQSSLGATITEIGWVVTGYAIANVIVIPLTAWLGDYFGRKAYFIFSLIGFTIASMLCGFAVNLQMLVIARILQGLCGGGLLAKAQAILFETFPPEQQGLAQAVFGVGVISGPAIGPTLGGFLTDNLGWEWIFFINLPFGILAVVMAILFLPSYHQDKPINRSVDWLGIILLTLAVGSIQTFLEEGEKEDWFASDFIVTLAITSVIGLALFIWRELNTKNPAVDLRVLRHRSLAAGSIYSAVLGMGLYGALFAVPIFAQTILHYTATQTGMLLFPGALASAVAMIMLGKLTSKIDPRIIIAGGGVITSLVMFNLQHINPDSNSETLFYPLLWRGVGTVMMFLPLSLATLGSLPKQDIPAGSGFYNLTRQLGGSIGIAVLTTVLAQREAFHRAVLVEKLSIYDPATSQRMSEIAAGLQSRGIDAIQAQSQALAIMNQTINTQSAILSFEDIFWLVGVAFLVSLPLLLLLGKKRPSVVPSAH
>NZ_AP018255.1|WP_096693746.1|172846_173773_-|hypothetical-protein
MSEENQEIKRVLPITKPKRSTDITPTTESIDDSDKEGSPLFFQAIGIISGVVDIDEENKNTTLTISGNKYPLYYIASNKGLRALDALKKHVANNGNHQRLIVYPRVTHFPGRDKPHQISFQLVGFDPGDNKGMCDELKDLEFKLSGIWQFIPVCQVPCISIFKNFTEDRLEYVKKSDISKRVKYMKASHIPLFWRDAPVPPFRFNPRVAKEQQGRAYFVSIIAKFLPQKNAFGFESLTQMPLEEPPKFFKASKKMKAEALSLRKKEPAPQNEAAKEQEAIPKTTSDSSKFSMPQKRSKPNSQVTEKEK
>NZ_AP018255.1|WP_096683840.1|169667_172730_-|GAF-domain-containing-protein
MENEAEVNAQILSSTYEEQFKALTRLIARIRESLDIETTFNTTVAELRQLLCTDRVGVFRFINELDWQGEFVYEDVSDVSLKAIDVKIYDPCFSTQFAAYQQGRIKVSSDIYQDCSHSCYIDLLKNFQVRACIVAPLLKGKQLWGLLCIHQCSTPRVWQTSEIEFVKQIAQHLGIVLQHTELLVQARLQVEKQKALTSVIARIRESLDLQTIFKNTATEVRQLLQADRVGVFRFDPSLNGEGEFVSESVANGWNSAMAAKVYDHCFSEQFAPQYELGKINVIPDIYQGDCSPCHIEIMAKFQVRANLVAPLLKGKQLWGLLCIHQCDAPRYWEPSEIDFVQQIAAQLSVAIQQAEYLKQTQVQTAQLAQAAERERAAERQKTLAKTIEKIRQTFDLKTIFHTATDEVRKMLSTDRAVIYKFNPDWSGEFVVESTTPGWDSLLELQWQQPEVRANASDCSIQNLANPPVTDTYLQQTEGGRFARGEVFMACNDIYEAGFNDCYIRLLEIYQARAYITIAIYHGQKLWGLLAVYCNSAPRQWQDEEVYLLTQISTQLGVALQQAEYIQQVQAQTAQLEKAASRQRALATTVDKIRQSLDIKSIFQATTQEVRGLLNVERVAIYRFYSDWSGEFVADSIVDGWTPVVKTQPTIEKTLLEAAKAGQYPRNETFVPISQGEKLWGLLVAYQNSHPRYWEEEEVNLLAQVAVQLGVALQQAELLEQTRLQKEKLNEALSELQQTQTQLIQGEKMAGLGQLVAGIAHEINNPINFIYGNITHVSEYTLNLLDLLNIYQKQYPEPVSEIEEQADKIDLDYIITDLPKTLKSIHSGAERISQLVESLRTFSRLDHAETKHVDIHEGIDSTLLILQHRLRASNNCPAIKVIKKYGDLPQVECYAAQMNQVFLNILGNAIDALEIQYKQHRKNHSNKELFAPQIIIQSQTVQNEKILIRIHDNGCGIPEKIRSRVFDPFFTTKEPGKGTGLGLSISYQIIVEKHGGKIECFSEPGNTEFGIEIPIRCPNTV
>NZ_AP018255.1|WP_096683839.1|168329_169427_+|pyrroloquinoline-quinone-biosynthesis-protein-PqqE
MIPRDNIAPPFSLVAELTYRCPLQCPYCSNPLNWSSDKYRTELATEDWLRIIQQARQIGVLQLGFTGGEPLLRKDLEILVEAAANQGLYTTLVTAGTLLTKERASTLHSNRLDHIQISLQDSRAPESDYIAGTPSFNQKIAAARLVKELGFPLTLNVVLHRQNLDRIEEIIELAETLQADRIELANTQYYGWGLKNRAALLPTREQLEHAERIVKAAQQRRKIPMGILYVIPDYYDKYPKPCMGGWGKRTLIIAPNGDGLPCQAAMSIPHLTFANAHEHSLEYIWYDSEAMNAYRGAAWMPELCQNCERKEIDWGGCRCQAYLLTQDSTATDPVCHLSPQHSQILAIREEVSSNSQLDFAYRGAK
>NZ_AP018255.1|WP_096683838.1|167954_168236_+|pyrroloquinoline-quinone-biosynthesis-peptide-chaperone-PqqD
MNNINLNNCPILVKGARLFWDDVRQQKFLLFPEGALVLNKTAWNILQLCDGRRTVTNIVNTLSAEYSHPNIEPDVLKLLNKLIERGFLYLLTP
>NZ_AP018255.1|WP_096683837.1|166964_167678_+|pyrroloquinoline-quinone-synthase-PqqC
MLTITNKTPWTAEQFEAELRKQHHRYHHLHPFHQRMNAGELTKPEVQRWVINRFYYQRNIPLKDAAILSNCPDHEVRRHWISRIIDHDGTTDGTGGIEAWLKLGEAVGLSREQLLNDQNTLPGVRYAVDAYVNFCKTKPWIESVASSLTELFGPDAIRTRLAALEKHYLWIDPSGFDYFRTRLHQAPQDASYALNLVISNCHTRDMQQRAVQALIFKCDLLWSQLEAIDRGETRPLN
>NZ_AP018255.1|WP_096683836.1|165961_166867_+|pyrroloquinoline-quinone-biosynthesis-protein-PqqB
MLIRILGAAAGGGYPQWNCHCNGCETVRDGKATPLTQSSIAVQSEEDGSWFLINASPDVRQQIEAMRASGSFPSRSGNRSLPFSGILLTDAEIDHTTGLILLRESTAPLNIYSTPTVKQALSSGYALLSTLQNYCGVNWAPLIPGEIIQLTTDLEVEVFALSTKAPKYIQSTEVEVWGIGLTIRDTITNTTVTYAPGMASIDTDLRSRFENSDCILIDGTFWTNDELPSLGIGARTAMQMGHLPLSGENGSLSQLSTITNPRKIFVHINNTNPILIPNSPERQTVENSSIEIGYDGLTIKL
>NZ_AP018255.1|WP_096683835.1|164741_165953_+|PQQ-dependent-sugar-dehydrogenase
MKAKINTLRMSLSIALGMAMIMTSGCSLTQASPDKSQVAQNTGAPTTPAAKQNIKQSVVVEGLERPWSIAWLPDGAMLITERPGRLRVVRNGVLEPTPVTGLPEVFAVNQGGLMDVSVHPRFAENGFIYLTYSHGTNDANRTRMARAVFDGKSLKDVKVVFEVNKAKSGGQHFGSRITWLPDNTMLLAIGDGGNPPLQLEGELIRKQAQNRNSHLGKILRLNDDGSIPKDNPFVNTGNANPAVWSYGHRNIQGLTFDAGNKRVWSTEHGARGGDELNLVEAGKNYGWPIVTYSREYSGGEITKERSRPGMVDPKTYWTPSPAPSGLAFYSNNRVPDWQGDLFSGELIGQGVRHIELDAKGNVTNQNVIDIGQRVRDVRTGPDGLLYVLTDEQDGRLIRLEPAS
>NZ_AP018255.1|WP_096683845.1|182643_183354_-|tetratricopeptide-repeat-protein
MSHFILKYMNYLQMSTVENIYKGALVTAEDWFRVGKEFYDHKKYEEAIEFYQRALQIQPDYLDALINLGFTWGHFQRFDDALVCFDRVIGINYAHFMGWFGRGQALRYLGRHQEAVLAYNQAIKIQPHSAAPWRYRGVALAALKLYSSAISSYDQALLRYRDDYYTWWIRGISLECLGKNEAAIISYDQAIALKPDFYEAWHCRAGALWNLQRYEEAILDYEEAIQCNSKYSKLLQ
>NZ_AP018255.1|WP_096683846.1|183628_184681_-|hypothetical-protein
MLRNQNNNFIKSNVLNTTLAVNTLTDYTSSFHLENYSLRLGGSSLDTSNLLPNIKSPWLKLQGIITGNSLYGTESHNISLEWADGIAKTFDPNKSTWIVIHGLQMDSPKGDILDQLKDIKNLANAVDGFSPDDQVLVLDWRSAAYSPGFNYRGNFNIPNPVIALSWVDSAAAWTADILKQFGITTPNINLIGHSFGSYVASTIAADVQGGINNIIALDPGNLEIGGDKYKQTKFSDNSHWSWSFYSSGFGDQDRARTADESFLIQFPFPTQFPDVPGVNKGHGAVEELFTAMLKKASDKQHNSLEDFFGLDRMNPIAKPWKIDYSTNWEATLIPEEIFGSWILRNIKYNP
>NZ_AP018255.1|WP_096683847.1|184929_186318_+|Uma2-family-endonuclease
MTSDLFEEYLQWQAKTKIELVEQKLIIGKSLSGSRLLFNQILRGWKAISAVALAPEYLWWQALNIAFGAPAIPDLNAIDAAYLRSWASEVIFTPQVTKLTERTGRKSSNIRETLYMAFFGLRWVGIGQSLGRVFVNRLGGNAFMPDILFYKGQGLNRLYDYYLEGRPPELVIEFITPEYTSYDTETKRAYYEAAGVPEYWIFDTEQENIKFLRLENGVYQRQHLSDDGRYEVSSIPGLTFLPAKLWEAADDFTYLKESDLFEIDSDAPKVERIKPIGEGIDWSRGQLGFATMLEPVPISFEDYIYWCPEPKFEFVDGKPYIGSRDGIKGLTGMFLMTFGLVESVKLLHPIEWVEALLAVRFAVQNTQEYKAQVWQLLHKTAILLREKYGASRLGVIGKLVKPEPLNFWDEITIVAWNLPSGQMGKAYLAVSEFSESFYLHLIDAEDATDIQLDEMASGLVEI
>NZ_AP018255.1|WP_096683848.1|186419_187121_+|HEAT-repeat-domain-containing-protein
MNKQQEYENTQFFVQQLQANQDEAVIKIAVKKLGEMSCDNLEAIEALINLIQTTQDEPTRWIGIESLSKIGAKNNDVIHVLIGQICNGRIPTRRIASQNLAKIIIDNLEARKFLVAKVKIAEDRFTCQYLAYTLARVEEVNEDVVNALIELIYKSSDNYTLKNCVDGLIKSKYYYQDKILNAIIKVVMVAQDYNTYYYTRCSLRQYLEKIGISVAVNFSSVRICELMLQNKSF
>NZ_AP018255.1|WP_096693748.1|187149_187734_-|SMI1/KNR4-family-protein
MKNFDWEKHLQEWSLKRLEILEDYEKEELPASMLESGYLGYPGATEQEIATAEARLGLTFPYSYREFLKVSNGLLTSGQGLKFSSTEEIEWYAWDNEAFIDKCIETWEPVTDEEYFVYGAEQWDLVWRPEYLQTAIEISSRDNGYIFLLNPQVSVLDNEWEAWFCSFSTAWGISRYRSFQEMMENILNDPESIF
>NZ_AP018255.1|WP_096683849.1|187765_188578_-|hypothetical-protein
MLQALKIKNIMAPIQLSLLGDGRLVILTPQTVRAAFFQLSKVNPKHNQYTGRHKYPLDRPLHKPFKIWKYKYKRDGRVYRYSEKPYWAKDYEGWEEYIKEKDATLLDVLHRAYLDEEKSYLHQKDILYIEQEINKQIILNNLALVNNEGVLLEGYGICKEVGKNREKVKYIRRYGMIFILESIMRHTVIKAKNLDLFLQDDNFDFHLVRYHGLLLSSKQACVELLFHHRLDLSITWTCTLENFQPRQIFQIKKIYPCQGFQIINKNLYNT
>NZ_AP018255.1|WP_096683850.1|188612_189341_-|hypothetical-protein
MVQTTFTKQKRELEKAISWIEKIRAQEVRHRNYNAQDEIQDELRESYVDYSPEEISQKVLEIVKDVVSQHGARQKSNSNNTGNFEWYGISVELTVPQLRALQSAHAVLSELARKLPRRNPKLIYNTTIDNRPAFAHVKQKHEEKQTRYVPYEEDSSTRVRTYEEHYKVITHYTQKVEIDYGLEIKLLNEIGEMIDDLGTAIQIAIDEANTKGRENDPVIDDVINRISQVILAKLPSPQNPVG
>NZ_AP018255.1|WP_096683851.1|190539_190941_-|DUF4188-domain-containing-protein
MAYSVYQLNIPEVPEAVIFVNGFVARDFSGFLWMWKNLFWIKNSTETAPGCVQVKAGICGYNEVVMVSYWNSSLDLKEFFRGESHRKMMQFTAKHPKSLCLYNETYQPSKSGKYTNEPQGMATIYTSVLNMPA
>NZ_AP018255.1|WP_096683852.1|191343_193647_-|tetratricopeptide-repeat-protein
MQYLHYPIAVLVLLAVITYLITFLSISKSIFRRPKYEIINSKQVPDYLKQLYQVEISELEKFGFKACCYVQVVQILQIYPLTQVEILLYNQSLKSYAKVGIRYPLEAVNLFDIEFYTFFRDGSLVLTMNGKADGVIDEMPKFTILDAYTAETLVQWQLHQDTIEKLNITEPIIGLSPDKFAVVLEKQSKNYLNYLYKAGKLRLVGEKQYSPTLQVAWRVTKKLVNGKHKVSQILNQRSNAAKTNPTMQVDIPVELEVEGFKRAESQNKRMVDGKFRAWMLFISFGLFVASYLHMFELHRLAIFVLVIMLHEAGHLIAMKLCGYRDTSMLFLPFLGAVATAREKDDTTLAQNVWVLLAGPLPGLILGILLAIIAGAKDERIWIKDTAWMLIGLNLINLLPIYPLDGGKIANLLVFSRFAYIDVLFKLFGLFVLGCLSISQPVLMIFVILTGFSIPQSFRAAKANFKLQPLLKQNNYSNQDNLINDIFIYLKQFKYNNLPVANKNFIVKDVIRRYREAQGKWITRISLIILYCGSLLGGFTGTLYAISPRAITLLSEIPHMFENPKQRRERFLSIQKREVEKATAALQKNPNDIDAYIKRARVLQTMQNKKGAVSDYNQIIRLEPNQTQHRFNRANLNSRLGNIQAEIQDYDYLLKLNHKPHLVYSQRAEAKTKLRDYKGAIADYNQVIKLNPKSSLNYINRGYIHIQLKDYKSALADANKAIQLEPQLHDSYILRSQAYTMLGNTKAASIDKQKAIALEQAWEETRED
>NZ_AP018255.1|WP_096683853.1|194104_194773_-|hypothetical-protein
MQKVRKLTELEYAFLFTLRKVNSIQLEGFKSFFNNLPVDPYIKGNYRSRRLSRFIASRDNLIKLPHGYFSQPKEYNPLLGDIRREFAELDDALIELDIFKNLVLAFSDSCKLHPEAEIGVHQIRITCSHDNLGNPAPEGIHRDGTNFIGIFSVDRENVQGGETHLYINRKENPVFNKVLNPGELLLVNDHEFLHFTTPIQPIVEAKGTRDVFVLTSPSLLSD

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Crispr_ID: NZ_AP018255_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_2

378345-378423

Orphan

Consensus_repeat	Method
ATAATTTCACTTTATCCGCGACAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_2

>merge|NZ_AP018255|2|378345-378423|CRISPRCasFinder
ATAATTTCACTTTATCCGCGACAAATAGCTGGAAGTCTTGAAATGCGGTTCTAATAATTTCACTTTATTCGCGACAAAT

>NZ_AP018255|2|2|378345-378423|CRISPRCasFinder
ATAATTTCACTTTATCCGCGACAAAT	AGCTGGAAGTCTTGAAATGCGGTTCTA
ATAATTTCACTTTATTCGCGACAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096683956.1\|368205_369222_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_AP018255.1\|WP_096683962.1\|374446_375016_+\|DUF3611-family-protein	unknown	unknown	gnl\|CDD\|372001
NZ_AP018255.1\|WP_096683957.1\|369708_370266_-\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|225786
NZ_AP018255.1\|WP_096683961.1\|373142_374054_-\|DUF2382-domain-containing-protein	unknown	unknown	gnl\|CDD\|226379
NZ_AP018255.1\|WP_096693760.1\|386022_386271_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096683959.1\|371088_372441_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|365848
NZ_AP018255.1\|WP_096683971.1\|386334_386721_+\|response-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_AP018255.1\|WP_096683964.1\|376396_376798_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096683958.1\|370301_371063_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183778
NZ_AP018255.1\|WP_096683970.1\|385070_385973_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277331
NZ_AP018255.1\|WP_096683972.1\|386772_387594_+\|4,5-DOPA-dioxygenase-extradiol	unknown	unknown	gnl\|CDD\|153375
NZ_AP018255.1\|WP_096683973.1\|388545_392184_+\|CAAX-protease	unknown	unknown	gnl\|CDD\|226857
NZ_AP018255.1\|WP_096683969.1\|382359_383199_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381364
NZ_AP018255.1\|WP_096683968.1\|381765_382329_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_AP018255.1\|WP_096683965.1\|378758_379238_+\|cyclase	unknown	unknown	gnl\|CDD\|227924
NZ_AP018255.1\|WP_096683955.1\|366998_367901_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_AP018255.1\|WP_096683963.1\|375039_376062_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_AP018255.1\|WP_096683966.1\|379243_380413_+\|glutathione-dependent-formaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|176243
NZ_AP018255.1\|WP_096683967.1\|380533_381712_+\|glutathione-dependent-formaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|176243
NZ_AP018255.1\|WP_096683960.1\|372476_373055_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096683956.1\|368205_369222_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	5.56925e-51
NZ_AP018255.1\|WP_096683962.1\|374446_375016_+\|DUF3611-family-protein	gnl\|CDD\|372001	pfam12263, DUF3611, Protein of unknown function (DUF3611). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.	2.87666e-61
NZ_AP018255.1\|WP_096683957.1\|369708_370266_-\|HdeD-family-acid-resistance-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	4.46588e-22
NZ_AP018255.1\|WP_096683961.1\|373142_374054_-\|DUF2382-domain-containing-protein	gnl\|CDD\|226379	COG3861, COG3861, Uncharacterized protein conserved in bacteria [Function unknown].	1.37227e-47
NZ_AP018255.1\|WP_096683959.1\|371088_372441_-\|cytochrome-P450	gnl\|CDD\|365848	pfam00067, p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.	6.76198e-88
NZ_AP018255.1\|WP_096683971.1\|386334_386721_+\|response-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.9254e-25
NZ_AP018255.1\|WP_096683958.1\|370301_371063_-\|SDR-family-oxidoreductase	gnl\|CDD\|183778	PRK12829, PRK12829, short chain dehydrogenase; Provisional.	6.2276e-98
NZ_AP018255.1\|WP_096683970.1\|385070_385973_+\|metallophosphoesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	8.6684e-43
NZ_AP018255.1\|WP_096683972.1\|386772_387594_+\|4,5-DOPA-dioxygenase-extradiol	gnl\|CDD\|153375	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.	5.26232e-113
NZ_AP018255.1\|WP_096683973.1\|388545_392184_+\|CAAX-protease	gnl\|CDD\|226857	COG4449, COG4449, Predicted protease of the Abi (CAAX) family [General function prediction only].	9.35154e-172
NZ_AP018255.1\|WP_096683969.1\|382359_383199_+\|aldo/keto-reductase	gnl\|CDD\|381364	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins. Escherichia coli YeaE is the prototype of this family. It acts as an aldo-keto reductase (AKR) that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor.	8.89435e-133
NZ_AP018255.1\|WP_096683968.1\|381765_382329_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	5.89096e-88
NZ_AP018255.1\|WP_096683965.1\|378758_379238_+\|cyclase	gnl\|CDD\|227924	COG5637, COG5637, Predicted integral membrane protein [Function unknown].	6.29135e-71
NZ_AP018255.1\|WP_096683955.1\|366998_367901_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	1.63682e-09
NZ_AP018255.1\|WP_096683963.1\|375039_376062_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.29497e-38
NZ_AP018255.1\|WP_096683966.1\|379243_380413_+\|glutathione-dependent-formaldehyde-dehydrogenase	gnl\|CDD\|176243	cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NZ_AP018255.1\|WP_096683967.1\|380533_381712_+\|glutathione-dependent-formaldehyde-dehydrogenase	gnl\|CDD\|176243	cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NZ_AP018255.1\|WP_096683960.1\|372476_373055_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	2.65721e-45

>NZ_AP018255.1|WP_096683964.1|376396_376798_-|hypothetical-protein
MHSQEIVQKYQLVDTTNSIDQIRIKSEQTQSNDVKAFYNFVAQVEIIGFLLFCGFLAFLNSRHLKALSDNCFINSKNSNHELPCQTCHYYSRNQYLYCAIHPSIAMSEQAKDCSDYSMKIQKISLKSKLMFWK
>NZ_AP018255.1|WP_096683963.1|375039_376062_+|AI-2E-family-transporter
MNNLRRRLSNSSIVYLLLLFALGWAFLQLFVYFETVIVIFTFAAILAALLNYPVRRLRRFLPRTVAVILVFLVSLLIITASAITLGLAILSQGQQLIDRALEIGNSIGSLLGQLQAFLQTRNLQVNLNAIAVPIRNIVLSGISYILSFLGSSLTNFINLIFIAVVTLFMLLNGKNVWRFVLKIVPEKSRQRFAHTVEEKLLGFFRGQLILMLFLSISNFLVFILLKVPFPLVLSLIIGVIDAVPGIGATLGIGTVFLILLTQDVLLAFKVLAASIILQQIQDNLISPRVMQNSVNVNPVVTFFALLVGARIAGLLGIFLAVPIAGLLVSLLELDELKGEE
>NZ_AP018255.1|WP_096683962.1|374446_375016_+|DUF3611-family-protein
MSSDLNSYLPTPTKKRFAATFGIVRPISFWLQLALGAVSGLALFLAIFSRNLTAQPTTNTVMGFGVFLGVIGILVLCFRLYWANRYRRLSNLLQAPNRELHPRKEEVIQVLQVGIIVSLVGLFLAFLASEVTVVAVVSKAIALPQGVAVYRPESSIRSLDLFVVLANVNLIGAHLVGSATSLGLLNWLD
>NZ_AP018255.1|WP_096683961.1|373142_374054_-|DUF2382-domain-containing-protein
MVLYKLEDFDKDYQDAVGRDEIKGLDVYADKDDEKVGTVKNILVDEAGRFRYLVVDTGFWIFGKQVLLPVGRTRIFPNSERVYALGFTKEQAKNLPEFSDDLKVDYDYEERVRGVYRDRPVEASAPLEASAPLDAVTAYKTPTTAVTPVVATNVNNVNNVDYARDTYTYEQEPNLYEMNNQDQQTLKLYEERLVAAKHRRKAADVNIGKRVETETARVSVPVEKERVVIERVTPTDAGRPSPTKDAFCEGQVAHMQIYEETPDIRKETVVSEEVRIRKEVQQDTVEAQDTVRREKLDINTQNP
>NZ_AP018255.1|WP_096683960.1|372476_373055_-|NAD(P)H-dependent-oxidoreductase
MPAAKILAFAGSARKESFNKKLVKIAAIGAKKAGVEVTYIDFRDLPLPLYDEDLESVEGLPDNALKLKALMKAHHGFIIACPEYNSSITPLLKNAIDWASRRSADEPPLVCFKEKTAVLMSASPGGLGGLRGLSHVRSILSSIGVLVLPNQRAIGSAYEAFDENDNLKDESQQTAIMQLGAELAIVTAKLNT
>NZ_AP018255.1|WP_096683959.1|371088_372441_-|cytochrome-P450
MAQDIFELPGPESNSIVGSLIDLGNDPLGFLTRCARDYGDIVPMRLGLTPTCLITNPDYIELVLKDRETFVKSRGFRVLKTLLGEGLLTAEGDSWLWRRRLAQPVFHQKRINGYATAMVDYAEQMLATWHDGETRDIHAEMMRLTLRIVMKTIFNAEIDEGEAKTVAHALDVAMQWFESKRRQNFLVWEWFPRPENIRYRHAIAEMDEAIYSLIKEKRNSSEQTEDLLSMLMHARDEETGQQMNDKQLRDEVATLMLAGHETTANALSWTWMLLSEHEHVRSKLHSELDRVLAGRSPSVEDIPQLRYTDMVVKESMRLYPPVSIFGREAARDCTIGDYAVPSGCVIQISQWVMHRHPRYFENQEEFQPERWEDDLEKRLPRGVYIPFGDGPRICIGKGFALMEAVLLLATIAQKFQLNLLPGFPIVPQPSITLRPESGIKVQTQKLSCKN
>NZ_AP018255.1|WP_096683958.1|370301_371063_-|SDR-family-oxidoreductase
MSQRVLVTAGASGIGREIVQAFAANGAKVFVCDIDAPALDSLVKDLPDVMTKVCDISKREDIEQMVAFGVDALGGLDVLVNNAGIAGPTAPIEEIDPNDWEKVVQINLNGTFNVTRLAIPHLKKSNAGVIINMSSVAGRFGYASRSPYSTTKWGLIGFTKTLSIELGEYGIRANAILPGAVEGARIQKVFEGRAQLSGQTVEEVRQDSMANQSIKRLVDPRDIAALAVFLASDYGKSISGQMLPIDNDMQKAS
>NZ_AP018255.1|WP_096683957.1|369708_370266_-|HdeD-family-acid-resistance-protein
MRTTDPEVRDRKRNGGSGTSIVVGIILVILGLVSIARPLYATIASTLVFGWIFIFAGIIQLVYAFGSRGAGQIIWKLLLGILSILAGIGVLSNVFSGVLALTLVLGVTIFFQGVMQVILAFGIRPARNWGWVLASGILGIILGIFIWSEWPFNAPWLIGLWVGISLLLNGIWMITLPSLPDYTRT
>NZ_AP018255.1|WP_096683956.1|368205_369222_+|AI-2E-family-transporter
MGIGQGIGLVVFVVCLYISWQIREVLLLIFTAVVLATALNRLVRLFQRFRIKRGIAIFLSVSLLLLLIAGFFILVMPPLLEQLQELVKIAPEGLERLRSWTSWFQNIIPEQLVQDLRNLEGLTQQIQSLIYRLFGNFLTLFSNSLGIILNVLVVLILTIMLLASPAAYRQGFTLLFPSSYRHRVEEILQQCEVGLGGWMTGTLFNMMIIAVLNGIALLILQVPLALVNGVLSGILTFIPNIGPTLSTIPPILLALLDSPGKAVAVLVVYIIIQQIESNILTPLIMKREVSLLPAVTLASQLIFATFFGFLGLFLALPLLVITQVWIKELLVKDVLNKR
>NZ_AP018255.1|WP_096683955.1|366998_367901_-|S-layer-homology-domain-containing-protein
MIRFLQFLSLFATLPALSFAVPLLAPIPTSAQTSNTQAPQTTFPDVPSNYWARPFIQRLAQRNILTGYPDGTYRPERTMQREELAAVIRKAFNEPPVRQIESGSVYKDVEQGYWAEPPIESAIEQGFMSGDGKGYFRPNQPVTKAQAITILNRGLDLSSAVASTGTTSTRRTARRKPVFAPIAITCLMQSVLIPRAEAAPSTVAPKATNQTAQPKLSASPIVSNYYVDANRIPQNAVDDVAAATLQNIVVNHPNPKVLEPNKAATRAEIAALVHQALVSQGRLEPLAANAPANQYIVRVR
>NZ_AP018255.1|WP_096683965.1|378758_379238_+|cyclase
MSQPIKVEKTVTINKPAEELYRFWHNFGNLPRFMKHLKDVQVYNDKRSHWITSGPLGGSVEWDADIVEDRENELIAWTSIEGADVDNSGIVRFQPAPGNRGTEVKVVTEYNPPGGVIGDAIAKLFGEEPQQQIGDDLRRFKQLMEAGEIATTVGQPKGG
>NZ_AP018255.1|WP_096683966.1|379243_380413_+|glutathione-dependent-formaldehyde-dehydrogenase
MKAVCWHGANDVRVETVPDPKILNPRDAILKVTSTTICGSDLHLYDGYIPTMQPGDILGHEFMGEVVEIGSEVKKLKKGDRVAVSSMVGCGQCFFCTQQMWSLCDNSNPNAWMQEKLFGFGTSGIFGYSHLFGGYAGGDAEYVRVPFADHGALKLPQDIPDEKLLPITDAFPTGYMGADLCNIQPGDIVAVWGCGPVGQFAMRSAYMLGAERVIGIDRVPHRLQLASDFAKAETINYEEVDAGEALKEMTGGRGPDACIDAVGMESHGMGLEGFYDEAKQKVGLETDRPTVLRQVMLACRKGGTLSIMGVYAGFVDKIPMGAFMNKGLTLKTGQMHGQKYMPILLDSVIKGEVDPSVVFTHRLPLAEAPQGFELFKHKKDGCVKVLLQP
>NZ_AP018255.1|WP_096683967.1|380533_381712_+|glutathione-dependent-formaldehyde-dehydrogenase
MKAVCWHGANEVRVETVPEPKIMNPRDAIVKITSTAICGSDLHLYDGYIPTMQKGDILGHEFMGEVVELGSAVKNVKIGDRVVVPFTISCGSCFFCKKDLWSLCDNSNPNAWIPEKLMGHSPSGLFGYSHMMGGYAGGQAEYARVPFADVGLLKIPDGLADEQVLFLTDIFPTGYMAAENCDIKPGDIVAIWGCGPVGQFAIRSAYMLGAERVIAIDRVPERLQMAKEGKAEVLNYEEVDVGEALKEMTGGRGPDACMDAVGMEAHGTGPDSFYDQVKQAVRMETDRPTALRQVIVACRKGGTVSIPGVYGGFVDKIPMGAAMNKALTFKTGQTHVHRYLRPLLERVQNGEIDPSFVITHRLPLEQAPHGYEIFKHKKDNCIKIVLKPGQAA
>NZ_AP018255.1|WP_096683968.1|381765_382329_+|type-1-glutamine-amidotransferase
MTEELTNKKVAILVTDGFEQVEMTQPKQALESAGAQTHIISPKSDRVQGWNHFDKGDFFSVDVPLDKVNPADYDALLLPGGVANPDQLRTKAKAIEFIKSFFDTDKPVAVICHGPWTLIEADVVRGRRLASWPSLKTDLQNAGAQWVDQEVVVDSNLVSSRKPDDIPAFNREMIELFSHAGQVRQMV
>NZ_AP018255.1|WP_096683969.1|382359_383199_+|aldo/keto-reductase
MEQHRFGSTQREVAVIGQGTWYIDNGDRASAIAALRQGLDLGMTHIDTAEMYGTAEDVIAEALIGRRDEVFLVSKVLPGNASRRGTMAACEKSLARLKTDRLDSYLLHWRGQHPLEETIAAFEQLQHEGKILCWGVSNFDVPDLEAVQKIAGEGSLVCNQVLYHLRERAIEHAVIPWCEKHGVAVVAYSPFGHGDFPSSRTTAGRVLQEIAAAHNATPRQVALRFLVRHSSLFAIPKASNPEHAAENAGAGELNLTQTELDRIDAAFPTGSRPRVLPML
>NZ_AP018255.1|WP_096683970.1|385070_385973_+|metallophosphoesterase
MKSITKKIKYFLLGLLGLIGALLIYGLCEPYFIDVEPQVAAIPNLSNVWVKQRIAVIGDWQVGMWLANTPTISRIVSQLVSLRPAAVLVIGDFIYDAGEDPSEEINKAIELVRPLHKAGIPTYAVLGNHDYAMSDKNAKPNVAQADKVAGALKAVGVQVLENEAVTIPNRIREGEPLYLVGVGSHWANKDKPAAALAQVPDGASRFVMMHHPDSFEAFPANSAPVAVAGHTHGGQVRLPFTPEWSWLSFVKGQKVQGDSWINGYGAPGNHLYVNRGIGFSILPIRINCPPEITLFTLRRV
>NZ_AP018255.1|WP_096693760.1|386022_386271_+|hypothetical-protein
MLRTMLYNSNKIKAEDKVLILYPPYVAGLEGIICGQEKSSKRENSKRWLILVNLENFMISLTSQDFILLKNNQLPYQIINLQ
>NZ_AP018255.1|WP_096683971.1|386334_386721_+|response-regulator
MNNKILIVDDCPDTCLLMQVILELNNFNVDIADNAVLGLSKIRNSPPNVVITDNMMPDMDGCEFLRCIRTSNEYDYLPVLMVSGFDEADIIANSQYKFDAFIQKPIVPNRLVEIVNKVLNLNYEANPP
>NZ_AP018255.1|WP_096683972.1|386772_387594_+|4,5-DOPA-dioxygenase-extradiol
MIENKEIMPAMFIGHGSPMNAIEKNEFSLNWAKVAKTIPTPKAILCISAHFETGGTYITANDEPKTIHDFGGFPKALFDFQYPAKGSSDLVTRVKAVVTSTKVNSSKEWGLDHGSWSVLAHLYPKANIPVVQLSMDYTKDAEFHFRIGQELKELRKEGVLIIGSGNIVHNFEYLEYGKPFEATAIQQWATEADEKLRDEIQRRDFEEIINYRNFQLYRLAAPTPEHFLPLLYILGCLDEEEKVEFFNTKVVGGAFSMTSFITRLICSGGDENP
>NZ_AP018255.1|WP_096683973.1|388545_392184_+|CAAX-protease
MNETALDRFWELLGWVLALNSEAFEQINTLPYGSTVALIVVLFASLSQVIAQSIILFANRVKTVRFVLSLLVGAIVFAFGYIFLVLSTWLLGFVPFAAQAPFKVIARTLGFCYAPLIFSIFGAMPYLGEPILAVLSLWQLLAMIVGLAVVSNTNVWQAFETVVLGWFTLWVAQRTIGQPIAKFGRWVISKVAGVNLITKREQFLAILQRRLRPFEATNLTAVSAPSWGAETQSNVQTTAAKNRLSSLNAITRELGGIMIMASVTFAVFFLFSPIRHWWFAPYANLGGIFQLIFNLISIGIIIFVAAALLAPLEALGWWAGWFGEQVDTTRDVAQSESPQHPSISRYVIYLDGIGQSSFDYLPDIQEFLHHVALVLPEDMVLIKGIMPYSVRNKPLTQNRPLALLWRLADQFRFKNPASLLGYLVNIRNILVVAVSADKRYGLIYNLGIAQVMYQALIRHGYQLDSRVPITLIGYSGGGQMAAAAAPFLRQALTAPIEIISLGGVISANIDVLKLEHLYHLVGDKDTVERIGPVMFPGRWPIFFLSYWNRAKRMGKVKQISLGPVGHQLPGGLMDPEQFLPDGRSYLQQTIDWVVGILLSTVNHSDNHSERATRSILSNYERYKQAPFNCPEFYPIHQSVSQEYYRPQASWMGRLILPALPERQAIKGVKFEVYHAPRDFQHLVGQVIILRLSDDPQVQSYVQAVTKDVHFSPQAEYSSQQGNVHPTRINHWCQVNPLESLAGSHPDDDVMVMLPEPVVVQHKSNEGDETPPILYISHEPIQITGRYVGLVKFIQPIGSGSDKFRVVHFNRVSRQFDGAEEIVSLPPVIPNRNNTYPSTSKDIEKSTLNESGWYIYGACDSSGVFVVQGLAPRALLRVEPERMVAGSSVKKYLKKECWDNLTAQKGKISSVVLDSQTATSSKTSSNTSSNTWREGERALLIHVYGGIGGNKTEPKAKSPLYFGHFAYGIATVVREPLADELRFEIVYHQIYTHNSDGVIAGSLHWSRYMGDRQFGWLGLRPVADTLLKLDSFTGDYETQHGWKGSPINRLIQQLEIMAARYRIGDGTGGTFVGPANNCTQDANQALYAALREITLSIRSHPNLQEWKKQHPEQLQLLKQLEKLALDLKHILLPWGTARADWKNHAEILGSTLEDHPMQNLIRSILTWRTILPRLTSDEVSEAFLRRGASAWVLRTNQIGGFDPDIEPKAPMTL

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Crispr_ID: NZ_AP018255_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_3

785979-786109

Orphan

Consensus_repeat	Method
ATTACAATCAATCAAAGTAACGAGAAATTAAACTGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_3

>merge|NZ_AP018255|3|785979-786109|CRISPRCasFinder
ATTACAATCAATCAAAGTAACGAGAAATTAAACTGCTTCCACGCACCTACTTACGCCAATTAGCACATAAATCGCGTCGGTGCGATCTGCGCCATTACAATCAATCAAGGTAACGAGAAATTAAACTGCTT

>NZ_AP018255|3|3|785979-786109|CRISPRCasFinder
ATTACAATCAATCAAAGTAACGAGAAATTAAACTGCTT	CCACGCACCTACTTACGCCAATTAGCACATAAATCGCGTCGGTGCGATCTGCGCC
ATTACAATCAATCAAGGTAACGAGAAATTAAACTGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096684246.1\|790506_790698_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096684237.1\|774544_775117_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179157
NZ_AP018255.1\|WP_096684239.1\|777279_777597_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096684253.1\|794249_794432_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096684249.1\|792873_793086_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096684252.1\|793877_794213_+\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_AP018255.1\|WP_096684251.1\|793476_793890_+\|fatty-acid-oxidation-protein-subunit-alpha	unknown	unknown	gnl\|CDD\|370136
NZ_AP018255.1\|WP_096684245.1\|786153_789837_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096684254.1\|795554_795965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096684240.1\|778459_778714_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|314942
NZ_AP018255.1\|WP_096684236.1\|774032_774398_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|214834
NZ_AP018255.1\|WP_096684248.1\|792246_792843_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096693821.1\|775268_775958_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239321
NZ_AP018255.1\|WP_096684243.1\|782777_784010_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|223343
NZ_AP018255.1\|WP_096684238.1\|776258_776513_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|314942
NZ_AP018255.1\|WP_096684247.1\|790993_791503_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018255.1\|WP_096684242.1\|780660_782379_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206739
NZ_AP018255.1\|WP_096684244.1\|784545_785832_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|373105
NZ_AP018255.1\|WP_096684241.1\|779533_780046_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_AP018255.1\|WP_096684250.1\|793082_793289_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096684237.1\|774544_775117_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179157	PRK00889, PRK00889, adenylylsulfate kinase; Provisional.	1.72081e-113
NZ_AP018255.1\|WP_096684252.1\|793877_794213_+\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	3.32776e-61
NZ_AP018255.1\|WP_096684251.1\|793476_793890_+\|fatty-acid-oxidation-protein-subunit-alpha	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.05434e-76
NZ_AP018255.1\|WP_096684245.1\|786153_789837_+\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.89816e-78
NZ_AP018255.1\|WP_096684240.1\|778459_778714_-\|hypothetical-protein	gnl\|CDD\|314942	pfam12151, MVL, Mannan-binding protein. This domain family is found in bacteria, and is approximately 40 amino acids in length, There is a single completely conserved residue G that may be functionally important. The domain occurs in two types of proteins. In mannan binding proteins, it forms a homodimeric molecule which complexes into a homo-octamer. In thiamidases it occurs without repeats but in the presence of other domains. MVL is distinct amongst other oligomannoside binding proteins in that it exhibits specificity for certain tetrasaccharides. Each molecule of MVL has four distinct carbohydrate binding sites.	5.34681e-08
NZ_AP018255.1\|WP_096684236.1\|774032_774398_-\|acyl-carrier-protein	gnl\|CDD\|214834	smart00823, PKS_PP, Phosphopantetheine attachment site. Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups.	1.07905e-17
NZ_AP018255.1\|WP_096684248.1\|792246_792843_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	5.48353e-61
NZ_AP018255.1\|WP_096693821.1\|775268_775958_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	2.78766e-27
NZ_AP018255.1\|WP_096684243.1\|782777_784010_-\|trypsin-like-serine-protease	gnl\|CDD\|223343	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].	5.46237e-23
NZ_AP018255.1\|WP_096684238.1\|776258_776513_-\|hypothetical-protein	gnl\|CDD\|314942	pfam12151, MVL, Mannan-binding protein. This domain family is found in bacteria, and is approximately 40 amino acids in length, There is a single completely conserved residue G that may be functionally important. The domain occurs in two types of proteins. In mannan binding proteins, it forms a homodimeric molecule which complexes into a homo-octamer. In thiamidases it occurs without repeats but in the presence of other domains. MVL is distinct amongst other oligomannoside binding proteins in that it exhibits specificity for certain tetrasaccharides. Each molecule of MVL has four distinct carbohydrate binding sites.	6.3651e-08
NZ_AP018255.1\|WP_096684247.1\|790993_791503_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.66405e-10
NZ_AP018255.1\|WP_096684242.1\|780660_782379_-\|hypothetical-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	1.6426e-10
NZ_AP018255.1\|WP_096684244.1\|784545_785832_-\|serine/threonine-protein-kinase	gnl\|CDD\|373105	pfam14516, AAA_35, AAA-like domain. This family of proteins are part of the AAA superfamily.	0
NZ_AP018255.1\|WP_096684241.1\|779533_780046_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	7.16223e-32

>NZ_AP018255.1|WP_096684244.1|784545_785832_-|serine/threonine-protein-kinase
MARSVTLRRDQQQNVLQRITGEFFSQQDFAEDLGIAASTISNFVNSRSVDRRYFVQICERLGLNWRDYAVLPNQLEPEELQQLASQNPPSNTTLEYPEGQMSVNSPFYIERPPIEQRCYEEISKPGSLIRIKAPRQMGKSSLLAKIQHRAKQQGDRTVYLSLQKAVQKCFSDIDTFLKWFCVSVSNALDLTPKLDKYWDLADIMGGNLCCQEYFERYLLPEINQPLTLGLDEVDKVFEYPDISSDFFGLLRVLHEEGKQRTIWKKLRLVIVHSTEVYVPINLNQSPFNVGLPVELPEFTPEQVHHLAQLHHLNWSDREVLQLMKMVGGHPFLVRLALYHVARQDMTLAQLLQTAPTTTGIYSTYLRRLESILEQHPELEAGLKQIITTTQDTQLSKKTCSKLNALGLINIQDNEVLPSCELYRQYFSK
>NZ_AP018255.1|WP_096684243.1|782777_784010_-|trypsin-like-serine-protease
MESSNSTNTHMLHNTNKTSKKFFAIFASSLFAVNLLTGCGSKKADALDNANDKVVVTQLNLGKLRQNDSNPTQLNRPLSIQNRVPLADYTKPAVVQIASGCTAKVRSNYNNQSKVYDVSAGGMGSGFFVNSDGYIVTNVHVVEASKNSQECQKALFENYVEQIAQDLGVNPNELLNNPKALQEIDNSSEFIEEIKQINSVILPNGETLPFEIKVSGAPTGQGKDVAVIKVEIKNAPVLKLADSEQVQIQDKIVALGYPGINPSILDEKSFAEATITSGEISAKKQLADGSPVFQISASVTHGNSGGPVLNEKGEVIGITTFGGEPVNGQEVSGFAFAFTSNTIMEFVRQAGVDNEEGAVDKFYNEGLELYSQGVYTQAIEKFENVKRLFPQHSQVDKLIQECQTKIVAEK
>NZ_AP018255.1|WP_096684242.1|780660_782379_-|hypothetical-protein
MLETIHSLLDKINDIAVELQEPTTTKLVTAVREQLNTSKLRILVVGSTGSGRSSLSNVLLEQPILPVSPIPKAPISINIQYGGTDAVELATTNGLNQPIPQKELWSIVTRSNTDFTKYSSIKVETNCELLKTSEIRIESIAARRSITEWKELLAKTDYIILVLKATALLSEQEKQFIKNILVSNFGLERVAIVINQMDLVPEDEHVSIVELVRSFLGSYESQPVLIESSAVLADYGYEALMSLVKVSLLEKHNSLKSAALCQAMEICLTELTEGIIRQNALLALNEAQCKDLMNQIDSRNQWLQTRVEKSQNRVELFMSTLIKEEFFREIEGFSNALREQLPKEIMSVEDITTIRRYLPSYLDTIWAEFFYSQQSFISSKLSSEMVEISKLVEEELRDLFGDNIVKVEDLLTSFDPTPANRKAVLMQKKTSNQMGTIATGIQFAGFLLLIPALPLGVFTIGAGQIVRVAYKKEMQISEKQSIVSSTLSTTRELECQIKKQVEAQFVTLTEELKQRISELYDQALTEIYATLKNGVNMHKELGTKKEQLDKFNTVTIPELSKQLKQICCQDAI
>NZ_AP018255.1|WP_096684241.1|779533_780046_-|helix-turn-helix-transcriptional-regulator
MAKILAVEENSVNQKVFFNCLQTAGIQVVDLGDYSVEIIQNLLNNIDNINNGELMMDKSIFPPIPKLEEVFKYIELNYQEPISLKEVAQFVGYSGAYLSCLVRNLTGKTVNDWITERRLAQARDLLLKTNLSVYEIAISVGYQTPNHFFKQFRDYHNVSPKVWKQTHHNH
>NZ_AP018255.1|WP_096684240.1|778459_778714_-|hypothetical-protein
MSNNSVQSITKKFLLPLGTFIVGGSMILGASQAFAGDVNAGPIWNNNHARQRCPQVCNSVGLRWTGGWYTNDPGRNSVCDCVGR
>NZ_AP018255.1|WP_096684239.1|777279_777597_-|hypothetical-protein
MSNNFAYITKKMPLYTTKNKGFMMLITDILVKKKMLLAIFCVFVSSISTTVMISNKVRAQTTNLILENSTVCSPTQSQQDCQQEMKIKFGRQTIFVPKPINESTR
>NZ_AP018255.1|WP_096684238.1|776258_776513_-|hypothetical-protein
MSNNSVQSITKKFLLPLGTLIVGGSMIFGASQAFAGNVNAGPIWNNNHARQRCPQVCNSVGLRWTGGWYTNDPGRNSVCDCVGR
>NZ_AP018255.1|WP_096693821.1|775268_775958_-|thioredoxin-domain-containing-protein
MATQAANVQEDAELEAKVLQIIQKHPEAIMKSVEAHVQKKEHQQEQAQKAFFKKMVVQPKSIIGKSPTDGSSESKIILLEFSDFQCPFCAKTHQTLKQFIATNQGKITRVYKFLPITDIHSEAMPSAKAAWAAGQQGKFWQFHDILFENQDKLSDSFYISTAKALNLDLKRFNKERNSRAASAAVETDMQLAKEIGVSGTPTLLMNGQILKGDVQITDLEKLLSQDNQQ
>NZ_AP018255.1|WP_096684237.1|774544_775117_-|adenylyl-sulfate-kinase
MMKLQQHGVTIWFTGLSGAGKTTISQNVESELRRMGYSVELLDGDIVRQYLTKGLGFSKADRDENVRRIGFVANLLTRNNVIVLVSAISPYRDVRDEMRDYIGNFIEVYVNSPLAVCEQRDVKGLYKKARAGEMKNFTGIDDPYEEPLYAEVECKTHLETISASTSKVLNKLEMLNYIGLKYSVQANKKS
>NZ_AP018255.1|WP_096684236.1|774032_774398_-|acyl-carrier-protein
MQIHNEKAKHTSKVLQNYNANHKGYITQSRTVVEIQNWLVSYLAELLFIKTDEIDITIPFDRYGLDSASVIGLTGDLERWLTIELEPTLIYDYPCVEALARHLAEQLKVEDSNNSQNDYSI
>NZ_AP018255.1|WP_096684245.1|786153_789837_+|hypothetical-protein
MTTDYEYKVGGSLGENAPSYVTRQADFDLYHSLKAGEFCYIFNSRQMGKTSLIVRTMNKLQAEGFACTSLDFSVRGSRDIKSEQWYAGIVYKLTTNFNLGNPSDILRNWWQERGAIPPIERLEEFIETVLLASIQSKIIIFIDEIDSILSLGFDTGDFFALIRSCYEKRNFNPEYRRLTFALVGVAAPGDLIADKRRTPFNIGKAIQLEGFKDSEIEPLAKGFEGQIENPLALIQEILTWTGGQPFLTQKICRLIATDQNNVETVLIRSPHIASHLQDLIQKNIIENWESHDEPEHIKTIRDRMLLGEQIAGRFLGWYQQILLSGYIQADESIEQIKFRLTGLVVKQQDIIKVYNRIYSSVLNLTWVEKELRKIRPYSENFQAWVDSNYQDESRLLRGQALQDALQWATEKSLSSEDSRYLTASQELEKRELSSSLTVKEEESRILSAANETLTRASQKAKGRIRLGNIIFAASLVAAIFAAILAGIVNHQRQEAIVIRGLETSSAQLLRLPKSSFTLENLTDAMQSVIKLKKLVNNRRLLKDYPAISPVLALQTTLDNILEKNWLSGSDDIVFSPDGQTLATTSADNTAKLWNLKGVEIATFKHQGWVRNVIFSPDGQTVATASDDNTAKLWNLKGGEIATFQHQGWVRNVIFSPDGKTLATASDDNTAKLWNLKGREIATFQHQGGVRNVVFSPDGQTLATASGDSTAKLWNLKGEEIATLKHQDGVNKVVFSPDGQTLATASGDSTAKLWNLKGEEITTFKHQARVNDVVFSPDGQTLATASGSTAKLWSLKGREIATLPHQAGVNKVVFSLDGQTLATASDMNKVKLWNLNNWEVTTLEDQVFKVVFSPDGLTLATASVNNTAKLWNLIGREVITLKHQGWVRNVVFSPDGKTVATALDDSTAKLWNLNGGEIITLKHQAGVNKVVFSPNGETLATASDDKTAKLWNLKGEEIATLKHQGGVNKVVFSPNGETLATASDDKTAKLWSRWNLKGGEIATLKHQGGVINVVFSPDGQTLATASLDNTAKLWDLKGKEIATLKHQSWVNNAVFSPDGQTLATASRDSTATLWNLKGKEITTLKHRSWVNNVVFSPDGQTLATVSWDNTGKLWNLKGEEIITLKHQSWVNNVVFSPDGHTVATASNDNAVRFWIQTRDTWQQLAEYQGNDGFFSPDGKLIAITVDNSVQLRRVEGLDDLLARGCSWLQDYLANSTRKDLRKSLCPGK
>NZ_AP018255.1|WP_096684246.1|790506_790698_+|hypothetical-protein
MSHRKFHAAVVGLVLFAGTVASPVLAAKSASLSQNVNTTVVNKKQNTASSSQALDNYRTFCQA
>NZ_AP018255.1|WP_096684247.1|790993_791503_+|GNAT-family-N-acetyltransferase
MIEIKPLSKQTLTAAIKLADEVFQYQRWWTKASWAFQLSLMHGYFPKLLFRLKGISWCRYWVAVDSQANVLGITGLYTKSEDSKTYWLGWTCVKPEARGERIGSKLVDFAISQAQNSGANYLKLWTSDRRVYAIARQLYERRGFSLFQQVPKKRKKMNFNILYYQLKLK
>NZ_AP018255.1|WP_096684248.1|792246_792843_+|WD40-repeat-domain-containing-protein
MRYLSKLLFVYNLRATTSRNIADGKTLASAADDRTIKLWNISTGKQISTLTGHTDYVVSVGFSPDGKTLASASGDRTIKLWNISSGKLISTLTGHTGEVNSVVFSPDGKTLASGSDDKNIKLWNVRTLKLISTLTGHTDLVTSVAFSPDGKTLASASLDKTIKLWNLDLDDLLARGCDYLKDYLVTRDLERKELCPDQ
>NZ_AP018255.1|WP_096684249.1|792873_793086_-|hypothetical-protein
MKQEQILNNGRVMIILESNRVFAEISVNKVFLFIGISALTLVKVIDTEEDIPTNREESFKIGAYYWELMA
>NZ_AP018255.1|WP_096684250.1|793082_793289_-|hypothetical-protein
MVGLTPHINDLIGFLSYYLRRQLYKKGFKGLVDALGYADAIRFIRQFDSGSGDYTTECHQWLDSRSNG
>NZ_AP018255.1|WP_096684251.1|793476_793890_+|fatty-acid-oxidation-protein-subunit-alpha
MAKDKFHEAIKNALIKEGWTITDDPLFLQFGGVDLFVDLGAERMIAAQKENQKIAVEIKSFLGYSLISDFHQAVGQVMNYRLILQRDEPDRVLYLAVPLDVYETFFRLEFTQLAIASYQFKIIVYSTEDEVLLQWIN
>NZ_AP018255.1|WP_096684252.1|793877_794213_+|XisI-protein
MDKLEQYQRYIEDLLTEYSQFKPSYGDVEVQLIFDREHKHYQLMTFGWNGHKRIHGMMLHVNIKDGKIWIQHDGTEQGITGDLLELGVPKHDIVLAFQAPARRKYTDFAVQ
>NZ_AP018255.1|WP_096684253.1|794249_794432_-|hypothetical-protein
MTVSYARIITTERPFLVLAVLVFKRSMKGGEPVGGVGFRPVKLANPEGAFLHRSNTFNQP
>NZ_AP018255.1|WP_096684254.1|795554_795965_-|hypothetical-protein
MSIEQTTLEASATEITKAMLPDLEQLSKCAEEPVAVVFADSLLRKMRSLHDAYMYNPYTEVVMALHDALAHQNRWINYTSKQYEGAYNLFSALVNQNTITNSDVENAIISLENLGFNTLPFGTILEDDNYEDSEQL

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Crispr_ID: NZ_AP018255_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_4

1797091-1797170

Orphan

Consensus_repeat	Method
ATTGTCGGTTGAGGAGTAGGTTCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_4

>merge|NZ_AP018255|4|1797091-1797170|CRISPRCasFinder
ATTGTCGGTTGAGGAGTAGGTTCCGGAGTTAGTTCTGCTACAGGTGTTTCTGAAATTGTAGGTTGAGGAGTAGGTTCCGG

>NZ_AP018255|4|4|1797091-1797170|CRISPRCasFinder
ATTGTCGGTTGAGGAGTAGGTTCCGG	AGTTAGTTCTGCTACAGGTGTTTCTGAA
ATTGTAGGTTGAGGAGTAGGTTCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096685281.1\|1800770_1801709_+\|DUF1565-domain-containing-protein	unknown	unknown	gnl\|CDD\|284923
NZ_AP018255.1\|WP_096685285.1\|1802666_1805066_-\|CHASE2-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018255.1\|WP_096685289.1\|1808202_1808400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685270.1\|1794698_1795628_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|132997
NZ_AP018255.1\|WP_096685268.1\|1793524_1794619_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133038
NZ_AP018255.1\|WP_096685279.1\|1800038_1800485_+\|DUF1499-domain-containing-protein	unknown	unknown	gnl\|CDD\|226854
NZ_AP018255.1\|WP_096685272.1\|1795667_1796681_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566
NZ_AP018255.1\|WP_096685267.1\|1792574_1793504_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_AP018255.1\|WP_096685256.1\|1786557_1788579_-\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|349772
NZ_AP018255.1\|WP_096693938.1\|1806720_1808166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685258.1\|1788653_1789151_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|227350
NZ_AP018255.1\|WP_096685262.1\|1790691_1791459_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|372616
NZ_AP018255.1\|WP_096685283.1\|1801945_1802674_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685275.1\|1797669_1798572_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277324
NZ_AP018255.1\|WP_096685291.1\|1808390_1809128_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213262
NZ_AP018255.1\|WP_096685277.1\|1798660_1799854_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369518
NZ_AP018255.1\|WP_096685254.1\|1785136_1786543_-\|O-antigen-ligase-domain-containing-protein	unknown	unknown	gnl\|CDD\|377422
NZ_AP018255.1\|WP_096685287.1\|1805191_1806523_-\|DUF1822-family-protein	unknown	unknown	gnl\|CDD\|370155
NZ_AP018255.1\|WP_096685260.1\|1789198_1789645_-\|UDP-N-acetylglucosamine--LPS-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|370045
NZ_AP018255.1\|WP_096685264.1\|1791458_1792517_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213023

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096685281.1\|1800770_1801709_+\|DUF1565-domain-containing-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	4.66281e-22
NZ_AP018255.1\|WP_096685285.1\|1802666_1805066_-\|CHASE2-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.52827e-06
NZ_AP018255.1\|WP_096685270.1\|1794698_1795628_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	1.16982e-40
NZ_AP018255.1\|WP_096685268.1\|1793524_1794619_+\|glycosyltransferase	gnl\|CDD\|133038	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	4.30457e-42
NZ_AP018255.1\|WP_096685279.1\|1800038_1800485_+\|DUF1499-domain-containing-protein	gnl\|CDD\|226854	COG4446, COG4446, Uncharacterized protein conserved in bacteria [Function unknown].	1.0324e-64
NZ_AP018255.1\|WP_096685272.1\|1795667_1796681_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.12338e-110
NZ_AP018255.1\|WP_096685267.1\|1792574_1793504_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.4198e-44
NZ_AP018255.1\|WP_096685256.1\|1786557_1788579_-\|P-loop-NTPase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.48151e-33
NZ_AP018255.1\|WP_096685258.1\|1788653_1789151_-\|glycosyl-transferase	gnl\|CDD\|227350	COG5017, COG5017, Uncharacterized conserved protein [Function unknown].	2.23268e-18
NZ_AP018255.1\|WP_096685262.1\|1790691_1791459_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.10311e-06
NZ_AP018255.1\|WP_096685275.1\|1797669_1798572_+\|metallophosphoesterase	gnl\|CDD\|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.70472e-35
NZ_AP018255.1\|WP_096685291.1\|1808390_1809128_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213262	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter. OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	8.61247e-139
NZ_AP018255.1\|WP_096685277.1\|1798660_1799854_-\|hypothetical-protein	gnl\|CDD\|369518	pfam07787, TMEM43, Transmembrane protein 43. This entry represents the transmembrane protein 43 family of proteins, which may function as tetraspanin-like membrane organizers.	9.05417e-39
NZ_AP018255.1\|WP_096685254.1\|1785136_1786543_-\|O-antigen-ligase-domain-containing-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	0.00311889
NZ_AP018255.1\|WP_096685287.1\|1805191_1806523_-\|DUF1822-family-protein	gnl\|CDD\|370155	pfam08852, DUF1822, Protein of unknown function (DUF1822). This family of proteins are functionally uncharacterized.	4.47784e-33
NZ_AP018255.1\|WP_096685260.1\|1789198_1789645_-\|UDP-N-acetylglucosamine--LPS-N-acetylglucosamine-transferase	gnl\|CDD\|370045	pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like. Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane.	7.86335e-18
NZ_AP018255.1\|WP_096685264.1\|1791458_1792517_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213023	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes bacterial poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, hemin storage system HmsF protein in gram-negative species, intercellular adhesion proteins IcaB, and many uncharacterized prokaryotic polysaccharide deacetylases. It also includes a putative polysaccharide deacetylase YxkH encoded by the Bacillus subtilis yxkH gene, which is one of six polysaccharide deacetylase gene homologs present in the Bacillus subtilis genome. Sequence comparison shows all family members contain a conserved domain similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, which consists of a deformed (beta/alpha)8 barrel fold with 6 or 7 strands. However, in this family, most proteins have 5 strands and some have 6 strands. Moreover, long insertions are found in many family members, whose function remains unknown.	2.33371e-33

>NZ_AP018255.1|WP_096685272.1|1795667_1796681_+|NAD-dependent-epimerase/dehydratase-family-protein
MHFIVTGGAGFIGSHITEQLLSEGHYVTVVDNLSTGSLQNLPKHSHLKILQKDVLLCQPQDFPEPIDGIAHLAATPSVATSWLQPLSVHHNNLSATIAVIELCKTLNIPRLVFASSAAVYGNPTQLPITETQQTSPISPYGLQKLVSEQYASLFAQELGISFIGLRLFNVFGPRQLPNSQYSGVISIFLSAIQQGLPITIYGDGSQTRDFIYVKDIANGFVKALTATLTSGSSLIFNLGTGKSTSLMQLVDYLKIYFPQWQSHLKLAPARLGDIQHSTADISKASSLLSFEPQWSTQSALELFIASLHATDPKKNITMQTAKVVHYSNIGSYNNSKC
>NZ_AP018255.1|WP_096685270.1|1794698_1795628_+|glycosyltransferase-family-2-protein
MSRQPLVSVITPFLNAEKFFEEAIESVIAQTYNNWELLLVDDGSTDASTLIAKRYAQQYPNQIHYLEHPNHQNQGKSVSRNLGIDKAKGEYIALLDADDVFLPQKLEKQVAILETQPQAAMVYGPTQYWYSWTGSQDSQRDFLGKLGVKPDTLFDPPTLLTLFLKDGGIVPCTCGLLARLEVVRALGAFEEAIQHMYEDQVFIAKICLQSPVFVESGCWDKYRQHPDSSSYIAIRTGEYHPRKPNPARRAFLIWLVDYLSEQGIKDAELWRFLNKQLRPYRYPLIYRFWSLIKDLIRAVKPKFRNKYSA
>NZ_AP018255.1|WP_096685268.1|1793524_1794619_+|glycosyltransferase
MPKVTVLMAVYNGERYLKEAIESILNQTFQDFEFLIINDGSCDSTREIIKSYQDSRIRLVENSSNLGLTRSLNKGLKLAEGEFIVRQDADDISEPERLSKQVAFLETHFNVALVGTWYKEIDAWGNLIGNRKLPCDCTKIRWDILFYCPFVHSAMMLRKSIVIKQIGLYDEAFVYAQDYDLWSRIARSLPVANLNEYLIKLRINPESMTATYGSIIDDETRQIMTANIGYLLDWEQNKVESTKLLFRTMAPLMIDSIDSMNIQMVTKSIDKILDLQTAFCQYYKLNSTESVNQRTKVCIRMSYQLIKLAHCSLNQDNYNSVWQLLVQAYRLHLPILLTKTHARIILKLLIGQRLIKRISYLTQS
>NZ_AP018255.1|WP_096685267.1|1792574_1793504_+|glycosyltransferase-family-2-protein
MNSKPLVSAITIFFNCEKFIEEAIESVLAQTYDNWELLLVDDGSSDGSTAIALQYAQRYPQIRYLEHPNHQNRGMSATRNLGIRNALGEYIAFLDADDVWLPQKLEQQLATMQSQPEADIVFGPTQRWYSWTGNPDDAKRDSLRKINIQPHQLLRPPKLLALLLQGKANTPGTCSVLIRRSIVEKIGGFEEVFRGMYEDQAFFAKVYFKASVYVETKCWDKYRQHPESNCAIAKKTRKFHPYYKLNPAYENYLNWLVKYLSKEEVKDVKIWRSVEIALWPFRYPKLYSLQYPLEKIWNGIKYRLSVTNN
>NZ_AP018255.1|WP_096685264.1|1791458_1792517_+|polysaccharide-deacetylase-family-protein
MKIPGISRLRGVVRRVENRLAPSGLILLYHRVTELGSDPWSLCVSPQHFAEHLEVLQKLGVTVPLQQMNHTLQSGKRLERQVVVTFDDGYADNLHNAKPLLERYGIPATIFLTTGYMVQEEEFWWDELDRILLQPGCLPSVLSLSVSGRNYKWELSKDGDYSEQDYQYNRRLNWKKKNISSIRHSIYYSLYKLLYSLPKHERAHLIDQIRIWAGASTQVRPTHCTLTQSQMLELAQGELIEIGAHTITHPFLATLPSQAQQEEITSSKTLLEEILERRITSFAYPHGNFGSETKTIVQEAGFSCACSTTTGNVRKNSDRYALPRVVVEDWDGDEFARRLSVYGFVGAGSQIS
>NZ_AP018255.1|WP_096685262.1|1790691_1791459_+|methyltransferase-domain-containing-protein
MNMQMQQTLKQIVQYTLPAPLHRFVGKQLLGDKYRPPVGAVDFGSLRRLIPISIRFGYNRGLPIDRYYVENFLARCADDVKGRVLEIGDRSYTQRFGGARVQHSDVLHISEGNPEATIVGDLVSADHIPSDAFDCLVLTQTIHLIYEVRAAIQTMKRILKPGGVALITVPGISQIAYDEWGDYWCWSFTALSARRMFEEFFPSENVQVDIHGNVLAATAFLQGLATKELRKDELDYCDPHYQVIITIRVVKPEID
>NZ_AP018255.1|WP_096685260.1|1789198_1789645_-|UDP-N-acetylglucosamine--LPS-N-acetylglucosamine-transferase
MKIMLVSTSGGHFSTMRGLEPFWLQHDRVWVTDLKKDTEVLNGKEKVYWLPYQGPRQIIPFLFNIPTALRIVSQEQPSLILSTGASIAVNFAIAAKISGIKFVFIESISRSKELSLSGKLVYALSNEFYVQWPNLCDKYSKAIFKGHV
>NZ_AP018255.1|WP_096685258.1|1788653_1789151_-|glycosyl-transferase
MITVTLGTIPFPFKRVIDWLSILLDCEVISEPIFIQHGATDISAIAEHPLVTAVPLLDFESLMKKAQDSRLVISHAGQGSTRAFVEKGASLILLPRLARYGEHIDNHQMLFAKSVQELGVSVCLSLYELKQTVLQPPPYMQKQLFAGPKLSEYLSQKYPVELVKC
>NZ_AP018255.1|WP_096685256.1|1786557_1788579_-|P-loop-NTPase
MNRILTTAIRHWLPLLSFNLLVLGATYFLVSRQPKVWTANAELILPNTTSDLNANFGTLGNLSSGGVVFSQQLNPLKILSSILLSNDTLIEAYKFDPQRELYPTLTAYKALFDVSPQGETTVISLTANGSNQELARKRLDNLIAAFQYRLDKLRASDGSERAKFIQKELKVARQNLMQTQITLTDFKKSTNLVSSEDQTREMVASINTLAREQSQVQAEYQASQAQVKMLSTRLKLSPQKAISSLELKENQNYQFIKQKLAEVEAELLKLQTMFTTDHPKVRNLISERNQLRQQMDSYIAQADSDRASINTSTGSDSAALIQQLTLAESQSKAAYARALQLQIETSKLQENLRTLPVAQSRLLELERQYKIAEGVYNGLVAKVQEAKLSAFSTYPNVQTLTTPTVDPRPSGSKSKAMALGGIIACAFGSVALTLLLESRNPLLSWADLEVLEAPILSSIPRLKQGAMELKLRSEGLLEFQRLASAVSMMQLENHSLMITSATAGEGKTTVTLGLAVALVTLGFRVLIVDGDFRKAQLSKRFGCSQPEIKELQIVPTNVAPNLDLLPTMPQGDEVIEFIASGRFKQFLKSLQTKNEYDYVLIDGAPIASTSEAALMTTATRNVLLVTCLGSSNRHPFSDSIDQLSRHQANVVGVVTNHAQTHSLAIFTDRARLN
>NZ_AP018255.1|WP_096685254.1|1785136_1786543_-|O-antigen-ligase-domain-containing-protein
MKSQRPKAIPYKTTKTIKTTVQHSDTIFTGFWIRWGNLTQSEKVVCACITLIPLWWLWGWNYLSVFLAISVFAYQYFQKGSLRLQKPSLFVIAGIAHGLYEVLSLSYWAVYNNYSLNPKSFTNGITTWIAPVLILWYIKNYKIQVRIQVIAWAFSTVVIQMLLFWVVIHFSWKESFYIPSRSLFGLLTGKGEVFVPGVGNSNFLMPYFPSDSSLLGMVRYVFFFHGPESLALAVGFICLLALDIKPKIWSILLFPASFFLLLLSGTRSTWVAIPVILVIRWLLTTGKNGRIWIVFAILAIISFTTLTIPAVNDLLFNSATHTAKATGEFRGDSTEVRAEIYRQTWKGFVNGSNTQLILGHIVPGETVLPGYAPAVVGSHSFILSTLLYCKGLLGSAIFWTFWISWISWLYATRKSRPMSCLIVYLLFSLTFSVMEFESVVMPLILITAVTHKSTLLSKKDRYLKSFSY
>NZ_AP018255.1|WP_096685275.1|1797669_1798572_+|metallophosphoesterase
MKLKRRKFLFLSTFGTISAGMMSCATAIKARNNPVKIAQAVVPDKKVLYRFVSVADTGTGDSGQYAVAKAMTNYHSQNPYDLVVLAGDNIYTNGEIEKINAVFERPYAELLKKGVKFQAALGNHDIRTANGDLQLKYTGFNYGGRYYTYSRGLLQFFVLDTNVNADFKTQLTWLDTELSKSKAPWKIVYGHHPIYASGVYGSNPAFIKVFTPIFQKHNVQLYINGHEHHYERTIAINGTTYLICGGGAGTRPVGKNEWTAYSAEKLSFAAYKVYADKIEVSGIGTDNQIFDKGIIPIKSV
>NZ_AP018255.1|WP_096685277.1|1798660_1799854_-|hypothetical-protein
MSEEYSETVVNSWGDNYITSLLAVILGLFLFFGSFILLFWNEGRLNLSEVAKTAIEISATQPNQKAIGKLISTTGTITSTQALGDNLFLVPGSYSIVDRTVEMFSWYEKTRTEERKNLNGSVSKTTYYDYSKGWTNDPKDSKDFKYSATHHNPKKAYSDQHYTTSGAKVGLYNINMADFEKVMQRKNSCESNSSETSYPTGKGIYLNDNSRLQLSSQLVKSSGDVRLINNYLFQGKGTPENPSIGDVRICYNTIPINSTVTVFGKLEAANQITAYNAPRNTKFHQLFTINRSEAIKTLKSEFTNWTWIFRIFGFLAMSFGIIFAIEPVNMLLRLIPFFGQWVGEISVYLSFFVGFVLTTATIFFSQLLHNPLVLIAVIITTLIILLGLKKIKQYILN
>NZ_AP018255.1|WP_096685279.1|1800038_1800485_+|DUF1499-domain-containing-protein
MSRLLAIIFGIFLILTAITLPATADIGVNEGYLKNCPASNNCVVSQNADLKHAIDPLPYHTDRDTARKILLKVLTVVPRTEVVEQTDNYIHALSKSRIFHFVDDVEFYFPENENVIHIRSASRVGESDLGVNRRRMEQIRLALRDLNI
>NZ_AP018255.1|WP_096685281.1|1800770_1801709_+|DUF1565-domain-containing-protein
MNLKLLLNHVNYSTVVLLSLTFFPKISQVHAQNVTIQRAPTSNAAQVILYVNPQSGTDNVTAGKTLTTPYRSISYALGQATPGSVIQLASGRYYSESFPLIIKSDVILLGNENAQGQGVEIIGGDSYMSRTFAKQNVTLVAQDNSQIAGITITNPNVRGTGVWVELGQPIIRNNNFINSKREGVFVTGNAAPKIENNRFSHNDANGVSVASYAKGEIRNNIFDNTGFGVAIGGNSTPLVSDNQIRGNRNGIVLTDSAKPKLLSNLIENNSDYGLVIIGQSEPSLDRNTFKDNKKLDQFRVIPTLQPEAPIEK
>NZ_AP018255.1|WP_096685283.1|1801945_1802674_-|hypothetical-protein
MLNKKYLRFMLILLFATSFVTTDSFTNLASTQTFAQIRVADFLGLWRRKNERKVSRTSRGGICSITPGIFETYVVWHDRPLFIWKSSANQDVQLVVREYDSQTEVWRKPVNLAAQKLAYGAEKALEAGKLYQWQLVNNSRGINESVTFQIMSEAERTKIQNDLQALEQNSKLAKSSPEDIALKKAHYFLDYQIKHQNDDKTYLPWSDALQSLYEVDKPSASFIEQRDKFVVSLCPSSSTATR
>NZ_AP018255.1|WP_096685285.1|1802666_1805066_-|CHASE2-domain-containing-protein
MEHLFNLKVQRVEQICLFELSWGQGQKLAAQVEYPAVLTQLYQDWKKAYLKFYQSEEMRGKAVGGGVAELSLDWHAELVKAESKLIYEFNSWLRSAALFDIRAQLNQEGSNLNQEPTKVFLTCAPIELDRFPWEAWESEFTSARKIQIIRSPQKISAPVHSLQQKGRTRILTILGDDTGLDFQNERAALKELSKIADVEFVGWQPNQTPTQVIDNIINAIADERGWDVLFFAGHSNETDLTGGELGIAPGVSISIKEIATHLNAARQRRLKVAIFNSCSGLNIAESLIDLGFSQVMVMREPVHNRVAQEFLVKFLLSLGKHLNVYESMMEARQFLRLDKSHTYPSSYLLPSLFCHPGAELYKIPPSLPWHGRIRQIVLPNSIIEAVALTVTIAVATMVPVQDFLLDGRIFTQAVYRETTKQIPDSEAPPVALVEIDSESITKRKLPSSQILPMNRSYIAELMERVRKLNAPVIGLDFLIDTPQKYPQYPATADKDLGTAVSRAVNENRWVVFGTVLNSDGQEASVNDANGIKNRNWTLQGYTESFPYYVELPEKECYETCPISYLMALTQLASQEITDLPKPGAGGNNNLRTQLLDTIKAKLPKKGDLTALKQWRPLFGQQPIIDFSIPPEKVYTKIPAWQLMENPDANKFPLISKQAVIIATGNDERLGKAPGIPDRMVIPTAMKFWTEQSWMTGGQSLAYTTHHFIRRHLITPIPDIWIIALAILVGKITVFFLKSKSPLKPKLRLQILTGALLGVVLYGVAALQLYITAALLLPWFLPSSVFLAYVLSATRRQNHA
>NZ_AP018255.1|WP_096685287.1|1805191_1806523_-|DUF1822-family-protein
MNEPTYLTDTDWLDWQSIGDDSTELAPEQIQRAAQLSLAITSPEQSWQIYLNALGTIGFEEWMAERTPDLDVIISESSIWQVAYSNILAAACNIQVGAFKVCVITANKVGDLQSIPFAVLDVPKLAAHFYVLMHVEEEQQKTNVFGFISYPQFQSYKQQASLQVEEDWTYALPNEQLNFDTDALLLNLRCLDASAINLPDVQCNIPAVQTDTSLALQQKLTGLQSELRKHPSQFLTVEEAKTLLTNSDLINWLYARATTEVVTNASNSQIAQPVQSIQSFINVGLWLRNQIDTVASELGWMLMPTFAPSPLRRSEDFKPIREALKKQGIDIPSHAQGAERDLNSECAALRLYAIIWELDEVSENPEWMMLIVVRSISSYLVPKSLRLEIRDKTQQLFNETLEGDSSKEILFARLIGDSNDRFWVTVTADETSVFEIPPLGIEE
>NZ_AP018255.1|WP_096693938.1|1806720_1808166_-|hypothetical-protein
MVLVSKYCEFVKLSNNGRRLVEMIVAAKDYLHNQFPTLASDSDVAVQQQLWQLMHKQQASNIIPEICLRCYISHQIYQACVDLGAKFGRQHGFNCEDLLPLVLGDEVLQKFQYQQAKTSSYKSIATTIFKTYNPSKGSLNTWVSRYVKQHPDLKKFLLEHGVFLVSDWALLNDTNPKELQRILTEMYHLVTDEVNKACELLISYHAVYRADRLQQLAGSTLPCQPPTSEQLSRIAEDLKTRMAGKNLSNEAVLRQLQFVAAKLREYRIIARGGAIKTLSYNQKEVEPIVEHKQAISNNEDEEENEFIKLYQKELIESLDQALSLVIEEFTAKLQRRRPSQVESFIKGLELFHCRGESMTHIAPQINLNKQYEVTRLLKLNDLRADVRQRLLLILRTKVIDIAKQFTDIEQLQTLDEKIDEALSEQITKIITEAESETKNPVRDQPLKSLFAQRLCFYLDKNSEFRIQNAECLTPNSLPADS
>NZ_AP018255.1|WP_096685289.1|1808202_1808400_-|hypothetical-protein
MLVGWVEAKRTQHNVYKFYQCWVPFLHPTYVFVLEKLHKLAASRNRALTGTLRGVVVQIAILRRR
>NZ_AP018255.1|WP_096685291.1|1808390_1809128_-|ATP-binding-cassette-domain-containing-protein
MPQDNQIAVKFHNVTLRRNNRDLVSNLNFNIYKGEALVLLGRSGSGKTTTMKLINRLLAPTQGEVLFDGIPTTQWDEIKLRRRIGYVIQETGLFPHFTVERNIGLVPSLEKWKPKQIKTRAHELLNLVGLEPSTFAQRYPHELSGGQRQRVGVARALAADPPMLLMDEPFGALDPITRLEIQKEFKRLQQDLGKTVVFVTHDIQEAFVLASRIGLMHQGELIVLEAPQQFRNSQHPEAKAFLQCL

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Crispr_ID: NZ_AP018255_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_5

1951606-1951697

Orphan

Consensus_repeat	Method
ACTAGCTTCGTTTGAAATCGTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_5

>merge|NZ_AP018255|5|1951606-1951697|CRISPRCasFinder
ACTAGCTTCGTTTGAAATCGTTACGCATACTACCTTCTAACTCGCGTTGGTGCGTGACGCCACTAAATCACTAGCTTCGTTTGAAATTGTTA

>NZ_AP018255|5|5|1951606-1951697|CRISPRCasFinder
ACTAGCTTCGTTTGAAATCGTTA	CGCATACTACCTTCTAACTCGCGTTGGTGCGTGACGCCACTAAATC
ACTAGCTTCGTTTGAAATTGTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096685513.1\|1951134_1951584_+\|DUF4065-domain-containing-protein	unknown	unknown	gnl\|CDD\|226128
NZ_AP018255.1\|WP_096685511.1\|1948679_1950665_+\|DNA-sulfur-modification-protein-DndD	unknown	unknown	gnl\|CDD\|274475
NZ_AP018255.1\|WP_096693963.1\|1945135_1946731_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|274476
NZ_AP018255.1\|WP_096685503.1\|1943516_1943867_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685521.1\|1952795_1954139_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|319271
NZ_AP018255.1\|WP_096693965.1\|1954700_1955273_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP018255.1\|WP_096685497.1\|1940364_1942437_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274475
NZ_AP018255.1\|WP_096685507.1\|1944160_1945123_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NZ_AP018255.1\|WP_096685499.1\|1942579_1943053_+\|DNA-phosphorothioation-associated-protein-4	unknown	unknown	gnl\|CDD\|274953
NZ_AP018255.1\|WP_096685505.1\|1943899_1944091_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685526.1\|1958232_1959756_+\|AmpG-family-muropeptide-MFS-transporter	unknown	unknown	gnl\|CDD\|341039
NZ_AP018255.1\|WP_096685517.1\|1952103_1952313_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685509.1\|1946952_1948572_+\|DNA-phosphorothioation-system-sulfurtransferase-DndC	unknown	unknown	gnl\|CDD\|235877
NZ_AP018255.1\|WP_096685523.1\|1955511_1956969_+\|DNA-phosphorothioation-associated-putative-methyltransferase	unknown	unknown	gnl\|CDD\|274979
NZ_AP018255.1\|WP_096693967.1\|1957432_1957717_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685527.1\|1959775_1960192_+\|ABC-transporter-permease	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685525.1\|1957046_1957436_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685515.1\|1951717_1952101_+\|DNA-sulfur-modification-protein-DndE	unknown	unknown	gnl\|CDD\|378074
NZ_AP018255.1\|WP_096685501.1\|1943181_1943517_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685519.1\|1952302_1952635_+\|acyl-carrier-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096685513.1\|1951134_1951584_+\|DUF4065-domain-containing-protein	gnl\|CDD\|226128	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown].	4.64899e-28
NZ_AP018255.1\|WP_096685511.1\|1948679_1950665_+\|DNA-sulfur-modification-protein-DndD	gnl\|CDD\|274475	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria. [DNA metabolism, Restriction/modification].	0
NZ_AP018255.1\|WP_096693963.1\|1945135_1946731_-\|DGQHR-domain-containing-protein	gnl\|CDD\|274476	TIGR03187, hypothetical_protein, DGQHR domain. This highly divergent, uncharacterized domain has several absolutely conserved residues, including a QR pair and FxxxN motif. Its most striking feature, however, is a near invariant pentapeptide motif DGQHR. Several different subfamilies occur specifically as a part of DNA phosphorothioation systems, previously called DND (DNA instability during electrophoresis), while others (e.g. CPS_2936) occur in other contexts suggestive of lateral gene transfer (sporadic distribution of helicase-containing cassettes). The region described by this model is about 280 amino acids in length; additional sequences show local sequence similarity.	2.68463e-44
NZ_AP018255.1\|WP_096685515.1\|1951717_1952101_+\|DNA-sulfur-modification-protein-DndE	gnl\|CDD\|378074	pfam08870, DndE, DNA sulphur modification protein DndE. DndE is a small protein of 126 residues. It is a putative carboxylase homologous to NCAIR synthetase. It is encoded by an operon that is associated with a sulphur-based modification to DNA.	2.54063e-59
NZ_AP018255.1\|WP_096685497.1\|1940364_1942437_+\|AAA-family-ATPase	gnl\|CDD\|274475	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria. [DNA metabolism, Restriction/modification].	3.1296e-23
NZ_AP018255.1\|WP_096693965.1\|1954700_1955273_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	7.60073e-34
NZ_AP018255.1\|WP_096685507.1\|1944160_1945123_+\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	3.19644e-85
NZ_AP018255.1\|WP_096685499.1\|1942579_1943053_+\|DNA-phosphorothioation-associated-protein-4	gnl\|CDD\|274953	TIGR04062, hypothetical_protein_CY0110_29519, dnd system-associated protein 4. A DNA sulfur modification system, dnd (degradation during electrophoresis), is sparsely and sporadically distributed among the bacteria. Members of this protein fam ily are strictly limited to species with the dnd operon, and are found close to the dnd operon on the chromosomes of species such as Nostoc sp. PCC 7120, Geobacter uraniireducens Rf4, and Roseobacter denitrificans OCh 114. [DNA metabolism, Restriction/modification].	1.16708e-64
NZ_AP018255.1\|WP_096685526.1\|1958232_1959756_+\|AmpG-family-muropeptide-MFS-transporter	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.99329e-70
NZ_AP018255.1\|WP_096685509.1\|1946952_1948572_+\|DNA-phosphorothioation-system-sulfurtransferase-DndC	gnl\|CDD\|235877	PRK06850, PRK06850, hypothetical protein; Provisional.	0
NZ_AP018255.1\|WP_096685523.1\|1955511_1956969_+\|DNA-phosphorothioation-associated-putative-methyltransferase	gnl\|CDD\|274979	TIGR04096, conserved_hypothetical_protein, DNA phosphorothioation-associated putative methyltransferase. Members of this protein family show distant local sequence similarity to a number of S-adenosyl-methionine-dependent methyltransferases. The family is identified by Partial Phylogenetic Profiling as closely tied to the DNA phosphorothioation system (dnd), and members are found adjacent to dnd genes in at least 13 species (Streptomyces lividans TK24, Shewanella frigidimarina NCIMB 400, Mycobacterium abscessus ATCC 19977, Nostoc punctiforme PCC 73102, Vibrio fischeri MJ11, etc.). The DNA phosphorothioation enables a novel form of restriction enzyme activity. Most members of this family appear in species with the DNA phosphorothioation system. [DNA metabolism, Restriction/modification].	0
NZ_AP018255.1\|WP_096685521.1\|1952795_1954139_-\|DGQHR-domain-containing-protein	gnl\|CDD\|319271	cd16414, dndB_like, DNA-sulfur modification-associated domain. Family of proteins related to dndB. dndB acts in the regulation of DNA modifications, including DNA phosphorothioation. Both have a conserved DGQHR sequence motif. These proteins show similarity to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, and other members of the ParB/Srx superfamily.	5.81331e-47

>NZ_AP018255.1|WP_096685513.1|1951134_1951584_+|DUF4065-domain-containing-protein
MLNCFDVAKYLLAQASEDAGDLISNLMLQKLVYYAQGFYLALYDTPLFPEPIEAWINGPVVPMLFEYYKKFGAGAIDYPNDVDFSIYDDETMSFLDEVYSEFGQFSAWKLRNMTQEEYPWKLAAQTHTEISHKSMKEYFKTQLASEDVS
>NZ_AP018255.1|WP_096685511.1|1948679_1950665_+|DNA-sulfur-modification-protein-DndD
MKFIELVLQNFGPYAGKQVINLDTQVDEHSRPILLVGGMNGGGKTTFMDALRLALYGHRAYCSTRGNLNYSDFLLQCINNNTKADDTRVELVFENIENDKPIRYRVVRTWNRSLKDGKDSLGVFNTKDDTWRLEELINTWDDYIENLLPLGISNLFLFDGEQVKELAEQETPPPAVADAIRALLGLELAEKLAIDIEILVNRKRKEIADTKELANLEDIEEKILLLQEDYNQNKNLENSFLTSLEKAEKDVKDALDKFVSEGGKIAAERSQLEKLRNQKIAEVEDARKGMCDMADTALPLALVENLLSTAQLQGQKEFSIEQAQIASNILVERDKRLLDLISNLDISKKESQKIKAFLDEDISTLNANLIQPEESWLLADAESLSKLSNILYYLQNSKNLAKQQLKILQVKEDEIVTLERQVQTAASPEEYNKLQDALKTAQAKAAQIKNKYEEVKRRVTELEEEIDIAKKELKEFTTQTIDRKNVEHIITASSRVQETLKQFREKLTRKKLNKLELEVTDCFRYLLHKSDLVHRIAIETVSFSLSLYDSQGKSVPKHRLSAGEKQLLAIAFLWGLARVSGRRLPVAIDTPLGRLDSSHRGNLVEKYFPAASHQVILLSTDTEIGKAEVEKLRENEAIAREYLLKYDSAKRQTSVVDGYFW
>NZ_AP018255.1|WP_096685509.1|1946952_1948572_+|DNA-phosphorothioation-system-sulfurtransferase-DndC
MTATQQPENKNQGQRTVAEFVEVVEALTQEIQELYCLDAIPWVIGYSGGKDSTATLQLIWNAIAKLPITKRKKVIHVITTDTLVENPIVAAWVRSSLIQMKKAATEQQMPFEPHLLTPEIAQTYWVGLIGKGYPAPRHKFRWCTGRLKIDPSNHFIRDVVRASGEAIVVLGTRKTESMNRALIMAKREARRVRERVSPHPSLINSQLYTPIEDWRTDEVWLYLMQWQNPWGYSNKDLFAMYRGATADNECPLVVDTSTPSCGSSRFGCWVCTLVDSDKSLTAMIQNDEEKEWLQPLVDFRLELDIENDRHKRDFRRIWGEVQLFERNVNGETSVEPIPGPYTKYWREYWLRRLLEAQTEIRRTAPAEMRDIYLITPEELSEIRRIWLQEKHEFDDSVPRIYKEVTGEDFKDVRPGAGYSLLGSDEWEVLEELCGSDAMHLELMAKLLDTEYQYRKRGRRVGIYDALEKCFDTSSRSQEDAIKNAHLKRDLREAVSEGNVAKVKQLTLGDALAEANQEESTNDSTGNNKNWKNIKFKNKE
>NZ_AP018255.1|WP_096693963.1|1945135_1946731_-|DGQHR-domain-containing-protein
MISSESDLISDILHQYNEPEQRNQKILSLLLENYLDSGNLIPAQKTQMGGTEAYVSSVTLEWFASRVNFASHLPLLSHKYNPHSGNIEIDADSIDEINQRPLDWSRQAALVQYLASRKHHKFPPVLVVLNQPWVDTPQAPEWDSEGRALRSAAEFTSLDEEGRFGLLNVNTENVTIYALDGQHRLMGVQGLIELLNRRQLQRYKKDKTPYETSIKLNDLIEQFDLSSDYLEKLPQEKIGIEFISAVTAGETRQQATRRVRSIFVHVNLMAVPLTKGQLTQLDEDDGFSIVARKIAVTHPLLEQREDRQARINWNSATVAPKSTVLTTLQALKEMSERYLGQKYLHWKKEKGLISMRPDDEELEEGIKEFNTLFDYLASLPSYRILEDEDTPSLRRFSFEKNGGEGNMLFRPVGQVALVQALGILVFKKGLSLEKIFKKLRTFDKKGGFSNMEFTNSLWHGVLYDTNRKRITVAGKDLAAKLLVYILGGMKDSMEISELRKEFAKTRTFGNKTMNFEGDFVDPQELGLPPKL
>NZ_AP018255.1|WP_096685507.1|1944160_1945123_+|HNH-endonuclease
MKDTSYYSNIFSKLNVSKSKELGTANHKPILILSLIDLITQGIIARNQILVSDQLVDTFNKYWNVLGTETRKGGLHYPFYHLRSEGFWHLIFKPGYEGLQNKTVKNLRPKTVNQLKLAVEYAYLDDELFNLLQNEGTRRELVESLISAWFSNYANEIEEVITINQKFQDLSPELDISETTNYDAQSKEALKTSIIRNAFFRKAVLHTYEYKCAFCGLKVMKSSKYHIVDGAHIKPFGKFRDSRIKNGISLCKNHHWAFDRGLFTVDDKYKIVMSTKFEEESPNAQPMKSFHGKNLYLPSLEKFYPDLEAFEWHRQNKFDN
>NZ_AP018255.1|WP_096685505.1|1943899_1944091_+|hypothetical-protein
MWKDEILEDIHKIREEHAKSFNYNLEAMFADLQKRQYEDGKQVVNLSQKRPIRKSPHPTTENL
>NZ_AP018255.1|WP_096685503.1|1943516_1943867_+|hypothetical-protein
MPNWNLIEEGFLKLTHQMQLGELASCLARIKAWSLTGVLNREVVSIILDEAILYTSLLERENPTTELAQLQQLLQDWRHSWLTISVSDADILNISAKSAAWSDRLLDMSGLLQLVN
>NZ_AP018255.1|WP_096685501.1|1943181_1943517_+|hypothetical-protein
MILIIRERATEEQLEEMLQVWGVIIKIVVDIEREILAGGSGKHYECEQELLKDGSLQRNLWGADWNPYTYTITFESLINIRPSQNNRTMIVQSPELRERITQITTRLLGGL
>NZ_AP018255.1|WP_096685499.1|1942579_1943053_+|DNA-phosphorothioation-associated-protein-4
MTETGKIRIAKDKAELVRSLTVSGGKTGAFQTFADVVVFAATLGAKHKKRVPLEEISKKEPGPIRIEQFISMGYDVVIKLLAIVETQDVKILSPTEEELEKQRHQIFEEYANGGLEIIQNEVRGAVDYLERILLLLSYERTSKDRTNEEFDLSRFLS
>NZ_AP018255.1|WP_096685497.1|1940364_1942437_+|AAA-family-ATPase
MKLISISLCNFRSFYGRTPEIFLAGDEVENTTVIHGNNGVGKTSLLNAFTWVLYEKFSAAFASAEQLVNKRAVAEASIGQAVECYVEITWEHDSKRYRAKRECRVYRTESDVEAGKTNMYMLVTRDDGRWFVPDQLPEEIINQILPCSLHQYFFFDGERIEKIVRNDKKAEIAEATKMLLGVEVINRSIRHLGEAKRALEAELRTIGDLEIKKLLKQHSNIESQIEAISKRSFEIQQEVEYQNTFKQEVSGRLRELSAVKELQERRQYLESQKDSLQKQIVKSKDSIKRYISNQGYSVLLSEINIQFRNIIDNLQESGDFKSGISREFVINLLNGSKCICGSYLHEHSQARKHVENWLEKAGSSTVEETSIRMTAQVDEIDKQAVSFWQEVDKEQVRINEARQTLNQVETELGEIKEKLRKNPSEEIRDIEQRIDDIEAKISELIFEQGRNQQQTETLNAELDDLNKQIAKQKLNEERQLLVQRRIGATTDAIDRLSEVKTRQENHFRYSLEKRVQEIFSAISPAPYTPKISDKYELTLMENTLGVEMPVAASTGENQILSLSFISSIIDKVREWSEKKKMLMLPESSTFPIVMDSPFGSLDAISRRHIAKIVPEMANQLVVLVTKTQWRGELQEEIANRVGKEYVLTYHSSKPDCEQDYIELRGVRYPLIRQSPNEFEYTEIVEVNHDG
>NZ_AP018255.1|WP_096685515.1|1951717_1952101_+|DNA-sulfur-modification-protein-DndE
MEPPLERIKISQTAKEQLIKLKRITKIDQWNILCRWALCRSLAEPTPPSPVPIKLDSNVEMNWRVFGGEISDMLLIALKQRCYNDGFGTTKEVLAEQLTLHLHRGIGYLAGDQKIKKIEDLIELTVN
>NZ_AP018255.1|WP_096685517.1|1952103_1952313_+|hypothetical-protein
MLEDPEKSGELWSDYVWADTESEAMRKCEIKAEQATIEGKTLVRLIGQPKRVGKGKRYECIFESEVYDA
>NZ_AP018255.1|WP_096685519.1|1952302_1952635_+|acyl-carrier-protein
MMLELPVIPKVGEVFLAVELSAIENMTVAETLNLLENMGYNPTLRYRQSKDGSISVYALLKHEHVNPDILQSDYLGEELDALAEVIQPPDAIVSPRGISSVKVPTLMISV
>NZ_AP018255.1|WP_096685521.1|1952795_1954139_-|DGQHR-domain-containing-protein
MADYVPALKAKMGDWDYYVTVMKLGKVSRECRLAEEIHANQHLDELIQREIQDRVQKEMVPYLLNAPQRFYGALVVAVYGGEPEFSHVKVDEHHLIDDKANRSSYGFGLLRFDGSQIYYALDGQHRLKSIQEALRQNPELGKEEITVIILKHENTKEGLERTRRLFSTLNRRAKPTSSGMNIAIDEDDAVAIVSRRLIKENDTLKILVLGNLGSKQISPTKKHEPYIATLTTFYDTNEVLLRAYNGGLEINARFKQFRPSDEDLDDFYKYLENIWMYWLHKCPGFDDVLRGWKKAGDIRKRADANGAVVFDNNGKSISGGNVFARPIGQYILADVLRLVGVQGKSMEDAIDAIMTHIPVDIDQAPWVNVIWNPIKQRADAGKESRKLIADMISHALGLRIDTRIRDLKQKYRDTIEDFRANLLEPIDWSGRPIPENVESEEEETPEL
>NZ_AP018255.1|WP_096693965.1|1954700_1955273_-|Uma2-family-endonuclease
MAQADKKEYYTLDEYLELEVNSQDRHEYIDGEILLMTGGTPNHNRIALNFSGALNSALKQPYETFVADQKLWIPKKRINTYPDVMVVEGELQLLEGRRDTITNPLMIAEVLSESTRSYDKDEKFVAYRTIPSFKEYILINQYTIHVEQYHKTDGKSWMFTEYDDLNETLSLKSIPFQITLADIYNRVRFE
>NZ_AP018255.1|WP_096685523.1|1955511_1956969_+|DNA-phosphorothioation-associated-putative-methyltransferase
MTGSYIEIERHRAAIQRVDISRPVKLALEWNILTPSNSFFDYGCGHGGDVQRTTKLGYQSTGWDPYYFPNETIVAADVVNIGYVLNVIEDTTERAEALSKAWSLTQKVLVVSAQVLVNAPSHHQISYGDGIVTRLNTFQKYYEQEELKKYIDDTLNVDAVPVALGVYFVFRSEEEKQHFKAIRFFSRTSTPRVRIPTKRFEDYQEILQPLMEFYTQRGRLPVKGELTNQEQLLIEFSNFKRAFAVILQATDEAEWDAIAYRRSLDIQVYLALMQLEGNRSLYKLPLEMRQDIKAFFGDYEDACDVADRKLFSLGQPGVVKTACDKSKVGKRTRSALYVHASALQELDPLLRIYEGCATRFIGRVDDATLIKFYIDEPRISYLYYPDFDTDPHPALKASINIDLKTLRVTHYDYSDRANPPVLHRKETFVVSTYPDYDKFAKLTQQEVEFGLLKNKNEIGTRDGWLNCLAEHNVEIKEHQVLPGNG
>NZ_AP018255.1|WP_096685525.1|1957046_1957436_-|hypothetical-protein
MTNFTLQQQNFTSNDISTRLQQLGANLASIQTLFTDASQQQAILNLAKESRYFIEWTVPDMVKKDDIDQAAELVDLGRVLTCWLFDKEKIWSDSTDNLETRTQASSQAQQWSQRVSEISQTYERSVSNG
>NZ_AP018255.1|WP_096693967.1|1957432_1957717_-|hypothetical-protein
MLEEHRFYIKTAVDIERRVLAGGGDMHYDCEQVLLKDGSKQENIWGASFGIIDKKISYESMVNLRPRQNRSMEVLDPRIRERISQIIIEFLGGV
>NZ_AP018255.1|WP_096685526.1|1958232_1959756_+|AmpG-family-muropeptide-MFS-transporter
MNDIKALTKVFGSRKMTSLLILGFASGLPLFLTSRTLQFWMQDAKIDIGVITLFGLVSLPYSLKFLWSPLLDRFNLPFLDARRGWLLITQVGLVLAIVALAFQQPAQNIQVLQFLGINCLIIAFLSATQDIAGDSYRTDVLNKLELEAGASLWVLGYRLALFITLSLAPVLADFIPWNAVYLLIAAIMGVGIIATLIAPPIRRREQQNHSSLSIKDLAIVVVIIGLIVGLLSWVMGDPCLDAAKKCTPFEARLFQFYWILAGLLIGWIALAVFSPKPPVSQHAEEKAPQSLQDALVLPFQEFFHRYGLTQASLILIFILLYKLGDSLVGITGNLFLREINFTKAELGAIQGGMGFIATTVGVLVGGVILSKIGINRALWIFGILQLLSNLGYYALSLVGRKDFTLLILAINIENFCAGLVTVVTVAYLMSLCNHNFTTTQFALFSSLMAISRDILSAPAGQLAKATGWSTFFLLTLVAALPGLLLLPVIAPWEHKPVSTMPRPGLDE
>NZ_AP018255.1|WP_096685527.1|1959775_1960192_+|ABC-transporter-permease
MGQRVIVVISTTILFLTGLLLGYVLSQLVLGRLALNLVTFLGTFSLIVIFATLYYVLFWEFRRQQTAQPAISRPLNREYSADEFAPPIAQLRNQLVNLLGGDSEGAERLVAQARKTYPKMPEHWYWERVIADVERDRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP018255_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_6

2289510-2289610

Orphan

Consensus_repeat	Method
GTAAATAATGAAAAATTTAGGTGAACCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_6

>merge|NZ_AP018255|6|2289510-2289610|CRISPRCasFinder
GTAAATAATGAAAAATTTAGGTGAACCCGCATAAAGGCGCCGACTGTACGGGCGGGTTAATCTATATCATCGTAAATAATCAAAAATTTAGGTGAACCCGC

>NZ_AP018255|6|6|2289510-2289610|CRISPRCasFinder
GTAAATAATGAAAAATTTAGGTGAACCCGC	ATAAAGGCGCCGACTGTACGGGCGGGTTAATCTATATCATC
GTAAATAATCAAAAATTTAGGTGAACCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096686033.1\|2296542_2296764_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686005.1\|2280002_2280917_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686031.1\|2295808_2296105_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096685999.1\|2276736_2277519_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224052
NZ_AP018255.1\|WP_096686001.1\|2277615_2279130_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|131777
NZ_AP018255.1\|WP_096686020.1\|2291263_2291500_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686014.1\|2287386_2288688_+\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_AP018255.1\|WP_096686024.1\|2292920_2293247_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_AP018255.1\|WP_096686022.1\|2291533_2292523_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686016.1\|2288883_2289471_-\|DUF4178-domain-containing-protein	unknown	unknown	gnl\|CDD\|379368
NZ_AP018255.1\|WP_096686027.1\|2293250_2293583_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375906
NZ_AP018255.1\|WP_096686003.1\|2279241_2279847_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP018255.1\|WP_096686029.1\|2295386_2295812_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350229
NZ_AP018255.1\|WP_096686012.1\|2286659_2287148_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686011.1\|2286036_2286483_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378550
NZ_AP018255.1\|WP_096686035.1\|2297030_2297564_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP018255.1\|WP_096686009.1\|2283286_2283826_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_AP018255.1\|WP_096686018.1\|2289612_2291181_-\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|235139
NZ_AP018255.1\|WP_096686007.1\|2281151_2283311_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|223588
NZ_AP018255.1\|WP_096686037.1\|2297585_2298158_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096686037.1\|2297585_2298158_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	1.99795e-21
NZ_AP018255.1\|WP_096686035.1\|2297030_2297564_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.55165e-19
NZ_AP018255.1\|WP_096686001.1\|2277615_2279130_+\|NAD(P)-binding-protein	gnl\|CDD\|131777	TIGR02730, Carotenoid_isomerase, carotene isomerase. Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.72073e-107
NZ_AP018255.1\|WP_096686014.1\|2287386_2288688_+\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	3.77776e-159
NZ_AP018255.1\|WP_096686024.1\|2292920_2293247_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	6.05206e-22
NZ_AP018255.1\|WP_096686016.1\|2288883_2289471_-\|DUF4178-domain-containing-protein	gnl\|CDD\|379368	pfam13785, DUF4178, Domain of unknown function (DUF4178).	9.18155e-39
NZ_AP018255.1\|WP_096686027.1\|2293250_2293583_+\|hypothetical-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	8.26969e-24
NZ_AP018255.1\|WP_096686003.1\|2279241_2279847_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	8.69592e-33
NZ_AP018255.1\|WP_096686029.1\|2295386_2295812_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.22845e-22
NZ_AP018255.1\|WP_096685999.1\|2276736_2277519_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224052	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	2.14292e-123
NZ_AP018255.1\|WP_096686011.1\|2286036_2286483_+\|hypothetical-protein	gnl\|CDD\|378550	pfam11068, YlqD, YlqD protein. The structure of a representative of this family has been solved (Structure 4dci) and found to form a tetrameric structure of prefoldin-like architecture with the beta-barrel core and helical coiled coil tentacles. This suggests that this family may act as molecular chaperones.	1.0454e-38
NZ_AP018255.1\|WP_096686009.1\|2283286_2283826_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.05408e-14
NZ_AP018255.1\|WP_096686018.1\|2289612_2291181_-\|polyamine-aminopropyltransferase	gnl\|CDD\|235139	PRK03612, PRK03612, polyamine aminopropyltransferase.	0
NZ_AP018255.1\|WP_096686007.1\|2281151_2283311_+\|DNA-helicase-RecQ	gnl\|CDD\|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	0

>NZ_AP018255.1|WP_096686016.1|2288883_2289471_-|DUF4178-domain-containing-protein
MLYIWLGIIAVSAAIIYTQRQQILKLLKPTTSTKTLAPINRTIFDLEIGDIVQHMAIDWVVEGRLTYQVGAYYWYEYLLQDKDKIAWLSVEEDDRVEVALLQPTNQLDVSNPPPELNFAGETYTCIDSGQARMTRTGLTMKRTAEKCQYFDYESADGQVLSIEVWDGDIEVSVGEKISPRSLTILPGDGRTVYRD
>NZ_AP018255.1|WP_096686014.1|2287386_2288688_+|2-oxo-acid-dehydrogenase-subunit-E2
MSIYEVFMPALSSTMTEGKIVSWAKSPGDKVEKGETVVVVESDKADMDVESFYEGYLAHIIVQAGDSAPVGEAIAYIVETEAEIATASSQAKSTSEAVVQPVAAMSGASTTATPTTANSNGSNHRSGRVVASPRAKKLAKELKVELDKITAGSGPFGRIVAADIEALAGKVSTTTTPVVAPVVAPPETPVNIPAPVAKPAPTPTPVSVVPGTTTPFNTLQNAVNRSMVASLAVPVFRVGYTITTDALDKLYKQLKSKGVTMSALLAKAVAVTLQKHPLLNASYSDQGIVHHSGINIAVAVAMDDGGLITPVLQNADQLDIYSLSRNWKSLVDRARAKQLQPEEYSTGTFTISNLGMFGVDTFDAILPPGQGSILAIGASRPQVVATPDGMFGVKQQMQVNITCDHRIIYGAHAAAFLKDLASCIETNTQSLTM
>NZ_AP018255.1|WP_096686012.1|2286659_2287148_-|hypothetical-protein
MSAKPKIAFILILSIFATISASVIFNSSNSSTLVYTNQNVQAQQPPVAIEAADIAANPERAKYKTIPLESIKSALQGTDPASLAMEAFDTNGIERKPRKVEVAYPQPNQALVTITQKDLVKNSRDAVRYRVELSSFGRTILATSPPMWQIVWVGKRNQESAE
>NZ_AP018255.1|WP_096686011.1|2286036_2286483_+|hypothetical-protein
MDVSKQLLLKRAVNVKAVVTPLWKEEVQQQLQGQIIQIDQQLQQLDVQGQRAIAEIQKQGLQPPGPQTLQQIDNIQAQVNEKKSELLEQKNQSLQNLQQVQLLELDQEVNQFQMEGFFRVEPGDNLISKLQVEVVIRDGVVEEIRGDI
>NZ_AP018255.1|WP_096686009.1|2283286_2283826_+|GNAT-family-N-acetyltransferase
MEKEKQKIEFSVRLARPEDATQIHYVHVDSVRQLCAGDYTKEQIEAWVGHLNPEKLRQYMINGAEDEVLYIAENKNNLIIGFSSFDKNGDINAIYVHPEYIRKRVGKQLLNAVEMEAIAYNYRKLQISASITAIPFYKANNYKFLKYSSHTLRSGVVIPCALMEKTLATDLTDVTDKFL
>NZ_AP018255.1|WP_096686007.1|2281151_2283311_+|DNA-helicase-RecQ
MLTYPNLEQALKHHFGYDNFRPGQREIIEGALQNRDLLVIMPTGGGKSLCFQLPALMRTGLTVVVSPLIALMQDQVEALQKNGINATFLNSSLNSHQARLREQAILNGKVRLLYVAPERLMSERFLPFLDLVQHQIGISSFAIDEAHCVSEWGHDFRPEYRQLKSLRQRYPNVPVVALTATATERVRSDIIEQLGLKKPSIYITSFNRENLYYEVRTRTKNAYAQILEMIRESDGSTIIYCLTRKQVDELTFQLQHSKISVLPYHAGLSDEERSSNQTRFIRDDVRVIVATIAFGMGINKPDVRLVVHYNLPRNLESYYQESGRAGRDGESSRCTLFFNVGDIKTIEWSIAQKTDEQEQKIARQQLRQVIDYAETNICRRTVQLGYFGERFAGNCGGCDNCRNPQPTQDWTLEAMKFLSCVARSKEKFGMTHVIDILRGAKTEKIKLYEHDKLSTYGIGKDKTVNEWRTLARSLLQQGFLEQTTDGYSVLKLNAQSWEIMRRQRTVFIVVPAAQKVAVQEISGNNVEIELLFQRLRSLRKKLADAQGVAPYVIFADSTLKLMAQSRPQTKEAFSKLSGVGNHKLAEYGSQFVNEICAYCRENNLASEKQEITPIANNAATSTEIMSLQLHQEGLSINEIAKKRNLKPSTVMRHLIDLMDKNHDIDINLLVPVQKQQVIWKVLNTLGDISLTPVKEYLGSDYSFEEIRLVKSRWKRKNRK
>NZ_AP018255.1|WP_096686005.1|2280002_2280917_-|hypothetical-protein
MTKFPYDEFSKNYLNELLRPLGKVETSRKVPAEIREIDVYFLPSSQQPPQDIMQIGILGRLALQPALIEPFRNAATRSEIRSCIGKLFTLFADIERGSKTRVREGELPRLWILSPTVSKAITNGLNSTIDEQWGLGVYFLGDVQKSAVIAIHQLPRTPDTLWLRIMGRGRVREQAVRELEALPESNTLRKKAIELLLSLKTTLEFRDDIKKDKDERRLIMQLSPLYEQKLAEVKLVGQQEGIQEGIQAERRAIVENLLKVRFGAVDNELSLIMRPIILLSPEEFAPLVLQLSQLSREELLDRFS
>NZ_AP018255.1|WP_096686003.1|2279241_2279847_-|Uma2-family-endonuclease
MLITQKRFYTFEEYLELEDAADSKSQYVDGQIIPMAGGSTNHNQIAVNFGAEFNFAFKKQDYRVYINDVKLWIPKMRINTYPDVMVIAGEPEYYNQRTDIITNAQIILEVLSKSTQAYDKEVKFEAYRTIKTFQEYLLIDPTRIYVEHYHKTGRKNWSFREYDQEDETVTLNSVVFQIAMQDLYNKVKLKKDDITLNNSKA
>NZ_AP018255.1|WP_096686001.1|2277615_2279130_+|NAD(P)-binding-protein
MFNFDVIVIGSGIGGLTAGSLLARYGKRVVVCESHTIAGGAAHSFRRHGFEFDSGPSFYCGLTGANSLNPVKQVLDILGESLDAVRYDPLGHYHFPENSIPIYSDHSLYLQSVSKVTPQGAIELKHFIDRMLPLYEAMKGIPTIALRTDWQMIPILLKNYLPSLLKMLPNLLTVQSSVGNVMDATVKDPWVRRLIDLECFLLSGLKAHGTIAPEVAFMLGERERAGVEYPVGGSGAIIGALVRGLERWGGTLRLGCHVEQILVESGKAVGVKLKNNEIIQAPIVISNATVWDTYTKLLSADDLPASYRQTALQTPAVESFMHLHLGIKASGLENLTGHHVVLHDSKLDITVPGNTCMISIPSVWDASLAPIEHHVVHAYTLEPYAGWERNEGYEAKKVVKAQTLYRALERVIPNIRERIVLELIGTPLTHAHYLRRYQGTYGPAIEATKGMFSGANTPIKGLYRVGDSTMPGIGVPAVAASGILCANTLVTPQKTMELLTTSKI
>NZ_AP018255.1|WP_096685999.1|2276736_2277519_-|ABC-transporter-ATP-binding-protein
MTEPLIELKGVSKAFGNNKVLDNIDLTIYRGEALGIIGPSGTGKSTILRVIAGLTAPDSGEIYVHGVRRKGLIEDGADPVGISMVFQQAALFDSLSVEENVGFLLYQHSKLSRKRIQDIVHEKLEMVGLGGSGDKYPSELSGGMRKRASFARAIISNPDNPQERPEVLLYDEPTAGLDPIASTVIEDLIRQLQCTQGVCSTYAIVTHQDSTIRRTADKLVFLYQGRVQWQGHVSDMDTTSNPLIRQFLSGSIAGPIHVVG
>NZ_AP018255.1|WP_096686018.1|2289612_2291181_-|polyamine-aminopropyltransferase
MGAEEESQHSLHINKAQRRILLLAAAVSSGTGLAVELLLGNLASYLMGNQALAYGIAIGGFLAAMGIGSYLSRFIAPKEQGRALQREMLSTFIKIELAIAPLTALLPMALFALFVADSAVIWQALFLTTILLGILAGLEVPILARLLEIADGVRDAISGVLALDYLGGLLGSLAFPLLLLPLLSMFPTAFVLGAFPALMVFAIGQYFPSMRRWGYVGLILGIVLLVSAPVSIPIGNKLENNLYNAPIIKRVQSTYQRIVLTRQGKDLRLFLDGDLQFSTVDEYRYHEALVHPAMSAVPNPKKVLVLGAGDGMAVREVLKWQGIKRVVLIELDPTIVKLATRYPQLAQVNANSLKDPRVQVINADAFVQAPKLPDIFDVIIADFPDPDHDSLAKLYSDGFYRRLMGRLAENGVLVTQASSSFFTPKVISCITATIAHAGLTVHPYVADVPSFGPWGFVLASRNNIDTTKLQLEVPTRYLTTALLQHIFELPKDIQLGNTEINRLTRPVIVRYQMQESRIRNIP
>NZ_AP018255.1|WP_096686020.1|2291263_2291500_-|hypothetical-protein
MITKILSAGTVLIAASTIYASVTDSSALVLRQEQQSNYSPREGTNPSGRYNSQGVWIYTSTSRSSYEGFQGGGPGSGK
>NZ_AP018255.1|WP_096686022.1|2291533_2292523_-|hypothetical-protein
MQVAITTKRTSRFIDRWAWGAFSGFILIFVTLIMSPLWQRTLLDEKVTVQDDEPAKLKPIELKPHTLGAMRVDAEARINANEWVAFEIQLLDKAGKVIASGTKEAWRETGTWYEDGESGNWDEQDTLGGLDVRAKQDETLTIALAVLDYGTTEGKDLNQPVSFQVTVSNGIIDTGYLWLGIIFSCPLSLATMYAARKSGKRAIFEQINDSDPTGRAILGGEKRLVRVRVEVEADETAPPQFEVTLVINDSYGEQIYCESTVVNVKRKTKDGSFIKAVVKLDKFFVMSERGSYGFHVDVYPDAPVDRTKLIVRDGARTLLPTDVIYARKQ
>NZ_AP018255.1|WP_096686024.1|2292920_2293247_+|DUF433-domain-containing-protein
MTFTELKSQLLSLTPAEKAEVIQILSQSLANTWQGINKTPGVMGGDACIRQTRIPVWLLVSYRRLGLSEAKILDNYPTLSAVDLANAWSYAQIHANEIEAAITKHNEA
>NZ_AP018255.1|WP_096686027.1|2293250_2293583_+|hypothetical-protein
MARLYADEQFPRETVLILRTLGHDVLTVQEAGKANQGIPDDEVVAFAASIQRAVVTLNRYDFIKLHAKQADHAGIIVCTENQDFSMLATRINEAISSFESLTGQLIRVYK
>NZ_AP018255.1|WP_096686029.1|2295386_2295812_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MTWILDTDHASLFLAGNKAIIAAVDKHYKDVAITVVTVQELFNGWVGRLNNPVQAKNLTLLYTKLWETTTFIKVITVLNFDKNAEDCYDLLRKSSKELGKNKIEKDLRIASIALTQNAIIATRNHKDFSQIPNLQIEDLSK
>NZ_AP018255.1|WP_096686031.1|2295808_2296105_-|hypothetical-protein
MDNWNILLESRDDGFTTATILEVPDCQISDETKQGAVEKVQKLLKQRLAQAEIIQIPAPIQPVTPENPLMKFAGIFQDDPDFMEIMEEIRAERGLDKI
>NZ_AP018255.1|WP_096686033.1|2296542_2296764_-|hypothetical-protein
MLKSYEAIFEDGQVRWLTDEPQVSSARVIVTILEDNTPQVRRRVPPASIAGKGRTLGDLVSPMIEEEDWECLK
>NZ_AP018255.1|WP_096686035.1|2297030_2297564_+|Uma2-family-endonuclease
MTTLLPHRWTVDDYHRIVASGVLAEYRCELIRGKIVDMAPEGPGHAHRCETSARYLERLFGKGWWARQGKPITLSDSEPEPDIAIVRERDYSQQHPKSEDICLIVEYAFSTQAKDTGVKRDVYAEHGIPDYIVADLKSSKVIDYSNPVNSVYTSEQTFYSGLIQIPQIQVDVQRLLS
>NZ_AP018255.1|WP_096686037.1|2297585_2298158_+|isoprenylcysteine-carboxylmethyltransferase-family-protein
MNTNVLAYLLIACYFVIERLLRKGEQALSLQPGQSDRGSSRLIWATGLFNLFIILIAPVLNFYRIGNWENNYLSWFGLALMIIGLIIRFWAAKTLGKLYTRTLQILEDHHMVNQGLYSIIRHPGYLGTFIMDIGAGFAVSNWFVLIIILLTGLTVRVYRVKVEEEMLEASLGEQYKTYCETTWRLIPFIY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP018255_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_7

2521964-2522039

Orphan

Consensus_repeat	Method
CTACGCTACGGGAAAACTCCGTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_7

>merge|NZ_AP018255|7|2521964-2522039|CRISPRCasFinder
CTACGCTACGGGAAAACTCCGTTTACGGACATGAATGGATTTTAGATTTTGCTACCCTACGGGAAAACTCCGTTTA

>NZ_AP018255|7|7|2521964-2522039|CRISPRCasFinder
CTACGCTACGGGAAAACTCCGTTTA	CGGACATGAATGGATTTTAGATTTTG
CTACCCTACGGGAAAACTCCGTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096686379.1\|2529387_2529549_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374224
NZ_AP018255.1\|WP_096686367.1\|2518226_2519645_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|213754
NZ_AP018255.1\|WP_096686373.1\|2523145_2523922_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223635
NZ_AP018255.1\|WP_096686365.1\|2517588_2517777_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686375.1\|2523942_2525271_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_AP018255.1\|WP_096686361.1\|2515371_2516046_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224047
NZ_AP018255.1\|WP_096686385.1\|2530392_2531583_-\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|223727
NZ_AP018255.1\|WP_096686377.1\|2525497_2529082_+\|transcription-repair-coupling-factor	unknown	unknown	gnl\|CDD\|224118
NZ_AP018255.1\|WP_096686359.1\|2514114_2515050_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_AP018255.1\|WP_096686355.1\|2513146_2513575_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240044
NZ_AP018255.1\|WP_096686357.1\|2513602_2514055_-\|DUF3531-family-protein	unknown	unknown	gnl\|CDD\|371866
NZ_AP018255.1\|WP_096694042.1\|2516119_2516320_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686363.1\|2516703_2517438_+\|phycocyanobilin:ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|179478
NZ_AP018255.1\|WP_096686381.1\|2529703_2529907_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP018255.1\|WP_096686369.1\|2519942_2521097_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_AP018255.1\|WP_096686371.1\|2521210_2521948_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|274374
NZ_AP018255.1\|WP_096686390.1\|2533591_2533810_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686388.1\|2532778_2533522_+\|creatininase-family-protein	unknown	unknown	gnl\|CDD\|224320
NZ_AP018255.1\|WP_096686383.1\|2529999_2530287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686387.1\|2532345_2532705_+\|nitrogenase	unknown	unknown	gnl\|CDD\|369150

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096686379.1\|2529387_2529549_-\|hypothetical-protein	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	7.47056e-13
NZ_AP018255.1\|WP_096686367.1\|2518226_2519645_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|213754	TIGR02971, devB-like_secretion_protein, ABC exporter membrane fusion protein, DevB family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. strain PCC 7120 is partially characterized as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter, required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. PCC 7120 has seven members.	5.7364e-69
NZ_AP018255.1\|WP_096686373.1\|2523145_2523922_+\|HAD-family-phosphatase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	1.66084e-26
NZ_AP018255.1\|WP_096686375.1\|2523942_2525271_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.66227e-152
NZ_AP018255.1\|WP_096686377.1\|2525497_2529082_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_AP018255.1\|WP_096686385.1\|2530392_2531583_-\|NAD(P)-binding-protein	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	4.91987e-56
NZ_AP018255.1\|WP_096686361.1\|2515371_2516046_+\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224047	COG1122, CbiO, ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism].	4.83276e-63
NZ_AP018255.1\|WP_096686359.1\|2514114_2515050_-\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.56546e-11
NZ_AP018255.1\|WP_096686355.1\|2513146_2513575_-\|NUDIX-hydrolase	gnl\|CDD\|240044	cd04688, Nudix_Hydrolase_29, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	4.18166e-39
NZ_AP018255.1\|WP_096686357.1\|2513602_2514055_-\|DUF3531-family-protein	gnl\|CDD\|371866	pfam12049, DUF3531, Protein of unknown function (DUF3531). This family of proteins is functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 149 to 199 amino acids in length.	9.44186e-92
NZ_AP018255.1\|WP_096686363.1\|2516703_2517438_+\|phycocyanobilin:ferredoxin-oxidoreductase	gnl\|CDD\|179478	PRK02816, PRK02816, phycocyanobilin:ferredoxin oxidoreductase; Validated.	5.39008e-156
NZ_AP018255.1\|WP_096686381.1\|2529703_2529907_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	9.95452e-13
NZ_AP018255.1\|WP_096686369.1\|2519942_2521097_+\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	0
NZ_AP018255.1\|WP_096686371.1\|2521210_2521948_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|274374	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.	2.61389e-145
NZ_AP018255.1\|WP_096686388.1\|2532778_2533522_+\|creatininase-family-protein	gnl\|CDD\|224320	COG1402, COG1402, Uncharacterized protein, putative amidase [General function prediction only].	1.13958e-86
NZ_AP018255.1\|WP_096686387.1\|2532345_2532705_+\|nitrogenase	gnl\|CDD\|369150	pfam06967, Mo-nitro_C, Mo-dependent nitrogenase C-terminus. This family represents the C-terminus (approximately 80 residues) of a number of bacterial Mo-dependent nitrogenases. These are involved in nitrogen fixation in cyanobacteria. Note that many family members are hypothetical proteins.	5.57894e-57

>NZ_AP018255.1|WP_096686371.1|2521210_2521948_+|ATP-binding-cassette-domain-containing-protein
MTRQEPVISIKHLNHYYGRGALKKQILFDINFDVYPGEIVIMTGPSGSGKTTLLSLIGGLRSVQEGSLQLLSQELYRASQKKLVNIRRNIGFIFQAHNLLGFLTARQNVQMAVELNDNISQLEAIRMSEGMLKAVGLGPRMNYYPDNLSGGQKQRIAIARALVNNPALVLADEPTAALDRQSGRDVVELMQRLAREKGTSIMLVTHDNRILDIADRIINMEDGVLESDSKNVFLSYESGLKTHNP
>NZ_AP018255.1|WP_096686369.1|2519942_2521097_+|FtsX-like-permease-family-protein
MLRKIPLAWLQLTRERTRLLVALAGIAFADILIFMQLGFQDSLYYSNVRFHASLEGDIVLISNQSSSLISMKNFSQRRLYQALNFKEVESVHPIYLDFTSFRNPITGFPRNIFVMGINPQSNILNIPGVSENLSKLNLPDVILYDRASRSEFGPIAQKFESGETVTAEVRQRRIRVVGLFMLGASFGADGNIITSDINFLRLFNNHQQGLIEVGLIKLKSGADANAFAQKLRQYLTQEVNVMTKQQYIDFERNYWASNTAIGFIFTLGAIMGFIVGIVIVYQILYTEVNDHLSEYATLKAIGYTHKYLLRVILQESLLLAVLGYFPGLFITLFLYQKAREATLLPVFMTFSRAVIVLVLTIFMCYISGVIAVRKLNAADPADIF
>NZ_AP018255.1|WP_096686367.1|2518226_2519645_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSRWTEESGTERPRERREYTWGLAVIVPLLLTAGVLTVAKWQQLQSLNNPAPINRPVANSVNALGRLEPRGEVIRVSAPSSGIQTSTRVEQILVREGERVKKDQVIAVLDNFKTNQAALEEAKAKLLETRANLGSVKSASPRELQAQNAVIARLQAQLRGESEAQQAAVNRLTAQLQGERIASQATVDRIAAELRGQTDSLTATVARTEAEQRNAQVDFERYESLFREGAISAQERDRRRLSAQTSSSQVTESQAQRRQAIATLQQQLAEARANQVKTVATLQQQITEARVNRNKTIATLQKQIEEEKSRFDRLRDTGPSNVQIAQAQVSSAIANQRKAETELGQSYIKAPITGEILKIHTKPGEVMTANGIAEIGRTDEMLVVAEIPEDNIGKVRLGQKATISSDNGAFNGQLQGTVTEIGRKVGKRDVLNTDPAADVDARVVEVKISLPREDSERVSGLTFAKVLVEIGI
>NZ_AP018255.1|WP_096686365.1|2517588_2517777_-|hypothetical-protein
MLIPKQSQRQMTITYISVAFMKRTVVVIIYLLSRFRFILFVLFKDWINIGFNVKYIAVLINE
>NZ_AP018255.1|WP_096686363.1|2516703_2517438_+|phycocyanobilin:ferredoxin-oxidoreductase
MSRISMPSVREQQHPLIRQLADSIEAVWHSSLDLSPYTLPAELGYVEGKLEGEKLVIENRCYQTPQFRKIHLELARVGNMLDILHCVMFPRPEYNLPMFGCDLVGGRGQISAAIVDLSPVNSHKLPLEYTDALSALEPPKFSNPRELPEWGDIFSEFCTFVRPATHEEEEMFVSLVRDFLNIHASNAINSSPVSPQQATEILAGQRNYCIKQQQNDKTRRVLEKAFGSAWTDHYMNTVLFDLPN
>NZ_AP018255.1|WP_096694042.1|2516119_2516320_-|hypothetical-protein
MYKYNDVVLTQRQNLKPYTWVGLKEFPGTYSYDEALLLCQISNHEWLAWAPDHGEFVLCIWQIEDM
>NZ_AP018255.1|WP_096686361.1|2515371_2516046_+|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MLYLRNLTYHPTACPDPILKSVNLDLESQKLGLIIGPSGSGKSTMLEILSGLAEPTGGSMFWREQELVPEQMQQLAGLVFQFPERHFCGGTILEELRLGHPEIGTEKVKETLSEVGLEHLSLSTKPHALSGGQQRRLALAVQLIRQPHILLLDEPTAGLDWSMRRQLVNLLAKLKQHWTLLVVTHDAGDMLEIADFCWSISHGELKSIDPIALEAKNKQPLPAA
>NZ_AP018255.1|WP_096686359.1|2514114_2515050_-|hypothetical-protein
MGKRFCYPQSTHTFNLTKLAGAGLAVFVTLTSFSGAYAFDPFRTTQPRNIGNNTEAAFKAIFLQGDYQAADRFLQKAIASEPNEPLAYAMKASLAYTNNDIASLDTYSQKTLAAAQKLIPTDALRGNLYAAVGQFLGGAVILTRQGTVNGAPAALSRLRQVYELLDKAEAISPQDPELNLLKGYMDLMLAVNLPFADPSQAIQRLEKNAAPQYLADRGIAIAYRDLKQYDKGLQYADRALKSTPDNPEVQYLKAQILRAKANKDKNPQMMREAVSLFDKALTRKSQLPYGLVKQIERERRNADSSIANLGK
>NZ_AP018255.1|WP_096686357.1|2513602_2514055_-|DUF3531-family-protein
MLVQFREFNPFDVWIWFKFSTVPSKREKEFVEEAFSSWFYLGKLGGFNAENLQAQETGLELSYMTYDQEGYDKSLKALMHNMGEFEYEGQWGRCWFDLGTSDAIALDILINALAQISEEYVIIEELYIGGENPDWPVEDSESRPSFMYDN
>NZ_AP018255.1|WP_096686355.1|2513146_2513575_-|NUDIX-hydrolase
MYKEGEIRLIALGLIRNGAKVLLSEGYDPVKQSTFYRAMGGGVDFGETSLEAVKREFQEEIQAELKNIRYLGCLENIFTFNGKPGHEIIQLYECDFVDPKYYEFEKKDFTEGERKKTAVWVDIDRCQSGELRLVPEQFLNYL
>NZ_AP018255.1|WP_096686373.1|2523145_2523922_+|HAD-family-phosphatase
MPNSLNLSQIRLIATDMDGTLTLSNKFTALLLQTFEDLKANGIKVLIVTGRSAGWVSSIAHYLPIVGAIAENGGLFYSYSNDPMYLTSIPDIITHRQQLAAIFDYLKRQFPKIQESTDNRFRITDWTFDVAGLSLDEIKTLADLSQERGWGFTYSNVQCHIKPQGQDKAVGLLKVLQEHFPEVSREQVVTVGDSPNDESLFDARYFPFSVGVANVSHYLDTLQHKPTYITLGAEAEGFCELTRMILAADVTDVTDSCS
>NZ_AP018255.1|WP_096686375.1|2523942_2525271_-|HlyC/CorC-family-transporter
MSPTVEILIIFLLVLANGLFVMSELAIVSARKVRLHQLAERGDAKARVALSLASSPNQFLGTVQIGITLLTILTGAYAEEAISKRILPILNSLAVLPTYRDQLAKLLAIVIITYITLILGELVPKRLALNHPESIASIMAIPMQMLSRLTTPIVYLLSASTDAVLRLLGIRPSTEPQVTEEEIRVLIEQGTEEGTFEEAEQDMVERVFRLGDRPVSALMTPRPDIVWLELEDSVEENRQKIIDSGYSRYPVCQGGLDNVLGILPVTDLLARSFTGQEMDLTVGLRQPVFVPESTRGLKVLEMFKQTVTHMALVVDEYGVIQGLVTLNDILIELVGDVPSVDGEDDPQVIRRDDGSWLLDGMLDVDEFMELLDIEELRSQDRGSYQTLGGFIITHLGRIPSAADHFEWQNMRFEVMDMDGNRVDKVLVIPNVNNKDDTETGNG
>NZ_AP018255.1|WP_096686377.1|2525497_2529082_+|transcription-repair-coupling-factor
MTFSSIVRVLGRSPLTSELITKLNRQQDLYLSGIPRLPKGLVTSALAKTEGQNLCVVCATLEEAGRWTAQLEAMGWKNVLFYPTSEASPYEPFDPETEMTWGQMQVLADLVKDKGELSNPDNGLKNQIAIVATVGALQPHLPPREAFHPFCLTIKPGSEIDLDEFGEQVTKLGYERVSLVETEGQWSRRGDIVDVFPVSSELPVRLEWFGDEIEQIREFDPATQRSALDKVQELVLTPTNFSVIITETLNNSAEYKVLSAEYFANSALSTQHSSLIEGSRRFLGLAYNKPASLLDYLPENTFITIDEPEQCYAHSDRWVENAEEQWQQLGTEKNDDEDESLSSSHSALNTQHFPLPKVHREFGECLLAASAFKLIYLSELAETIITEQGNQSGLNLASRPVPVTPHQFSKIAETIRQERDRNFSVWVISAQPSRSVSLLQEHDCPAQFIPNPNDFQAIEKLQTNHTPVALKYSGLAELEGFVLPTYRMVIITDREFYGQHSLATPSYVRKRRQATSKQVDLNKLRPGDYIVHRNHGVGKFQKLESLTVNEETRDYLVIQYADGLLRVAADQVGALSRFRATTNKAPELNKMTGKAWENTKNKVRKAIKKLAVDLLKLYAARSQQQGFSFPPDMPWQEEMEDSFPYQPTPDQLKATQDVKRDMESDRPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFSPYPINVGLLNRFRSATERREIIKRLATGELDIVVGTHQLLSKEISVKDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLAPRTPESVRAAIRQELDRGGQIFYVVPRVEGIEETASILREMVGGARIAIAHGQMDESDLESTMLTFSNGEADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPQQRALSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDVIGFDLYMEMLEEAIREIRGQEIPKVDDTQIDLSLTAFIPADYITDLDQKMSAYRFVAAAKSKYELTQIAAEWNDRYGTIPKPANDLLRVMELKQLAKNLGFSRIKPENKQHVVLETPMEEPAWNLLAANLADNLKTRFVYSPGKVTVRGLAAMKADQQLQTLIDAFDKMQGAVPEAAIV
>NZ_AP018255.1|WP_096686379.1|2529387_2529549_-|hypothetical-protein
MKWRVILEQDQETGDWAVWCPELPGCISAGETEEEALENIREAIQLYVEPDNV
>NZ_AP018255.1|WP_096686381.1|2529703_2529907_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKIKAIIHPAEEDGFWAEVPALPGCITEGDTMEEILTNLKDAIEGWLEVANSAYSVKSNTQIVEIAV
>NZ_AP018255.1|WP_096686383.1|2529999_2530287_+|hypothetical-protein
MNIYNYEKLECISPAQIENYLNEHGWRKKIVVEEVSVWIYKRQDRIFGLFLPLNINFVDYRNRVVEILDILQKAEKRSQEEILKFIEIQSNIVSP
>NZ_AP018255.1|WP_096686385.1|2530392_2531583_-|NAD(P)-binding-protein
MSTYTNTQEVIQINKIAIIGAGLGGLACAIALQKLGYDVQVYDKARDFRPVGAGFGLLPNGLRCLDAIEPGIVSLIKNSACEVSQTVLKNNQGETIRTTKGSRYTEKYGLPLITVWWWHLQQILASKVPDNKIHLNHRCIGFTQDNDGIDIYFDGGKTVRADLLIGADGINSAVRETLFRDDKPRYLGDMSWRAVIKCDQELLNRSELGFVKSNREFMYLLNVGDGHISWLYRQLSPDFCLSPNATEAKSQVLNKIANWGKPLRHLVEMTPAERILEAPICDRLPLETWHQGRVTLLGDAAHAMAPALAQGTNSTFEDVCELAWCFSHYKNISEALTNYERRRIESTTIIQNRSAEGEMDYYKTEEEKSPSLVLQQLQMNSEEFQNWIFSYQPPII
>NZ_AP018255.1|WP_096686387.1|2532345_2532705_+|nitrogenase
MITTNQSHIIVPAFVEGVTEAKQAIKKELFATKKINLLQPLRDKLDSLEIENRKLAKLIAKLIPAQCPFERDITLFGRKIAHIPPMCKLNPLYDQFVGLRFRALCYLVDKCGEDIQSYC
>NZ_AP018255.1|WP_096686388.1|2532778_2533522_+|creatininase-family-protein
MLLHLSTWQEVEAYLQQSQGIILPIGSTEQHGPTGLIGTDAICAEAVSKGVGEATHAIVAPTINVGMALHHTAFPGTISLRPSTIIQVIRDYVTCLAKVGFRKFYFINGHGGNIATLKAAFSETYVYLEELQIPDASLVQCQVANWFMCRSVLKLAHELYGDEEGSHATPSEVALTQYIYPEAIKVAPLSEEVGSGHKIYGATDFRRRYPDGRMGSNPALATPEHGQQFYEAAVKELSNSYLEFINS
>NZ_AP018255.1|WP_096686390.1|2533591_2533810_+|hypothetical-protein
MKKVDEEMEDELRAEYDLKSLRVRKFGTGRKNFGDMTVRLEPDVAEMFPNADAPNFCTGGFTNISRYLPRYR

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Crispr_ID: NZ_AP018255_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_8

2638139-2638235

Orphan

Consensus_repeat	Method
TGTTCACGAAACCAGTAGTACCAAGTGGCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_8

>merge|NZ_AP018255|8|2638139-2638235|CRISPRCasFinder
TGTTCACGAAACCAGTAGTACCAAGTGGCGCCATCTAAGCAATTATTCAACCAATAAGTACTACCTGTTCACGAAACCAGTAGTACCAAATGGCGCC

>NZ_AP018255|8|8|2638139-2638235|CRISPRCasFinder
TGTTCACGAAACCAGTAGTACCAAGTGGCGCC	ATCTAAGCAATTATTCAACCAATAAGTACTACC
TGTTCACGAAACCAGTAGTACCAAATGGCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096686549.1\|2637723_2638086_+\|DUF4864-domain-containing-protein	unknown	unknown	gnl\|CDD\|374400
NZ_AP018255.1\|WP_096686553.1\|2639385_2641152_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_AP018255.1\|WP_096686543.1\|2633151_2633634_+\|DUF4079-domain-containing-protein	unknown	unknown	gnl\|CDD\|372553
NZ_AP018255.1\|WP_096686563.1\|2643883_2649511_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_AP018255.1\|WP_096686533.1\|2621314_2622214_+\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|223613
NZ_AP018255.1\|WP_096686555.1\|2641741_2641876_-\|Photosystem-I-protein	unknown	unknown	gnl\|CDD\|369686
NZ_AP018255.1\|WP_096686531.1\|2620468_2621245_+\|carboxymethylenebutenolidase	unknown	unknown	gnl\|CDD\|366780
NZ_AP018255.1\|WP_096686545.1\|2633753_2636117_+\|ComEC/Rec2-family-competence-protein	unknown	unknown	gnl\|CDD\|377126
NZ_AP018255.1\|WP_096686567.1\|2650934_2651807_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_AP018255.1\|WP_096686535.1\|2622869_2623772_-\|TIGR04168-family-protein	unknown	unknown	gnl\|CDD\|275026
NZ_AP018255.1\|WP_096686547.1\|2636474_2637620_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|214858
NZ_AP018255.1\|WP_096686551.1\|2638505_2639348_-\|ATP-dependent-sacrificial-sulfur-transferase-LarE	unknown	unknown	gnl\|CDD\|224522
NZ_AP018255.1\|WP_096686541.1\|2632190_2633090_+\|glycine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|236473
NZ_AP018255.1\|WP_096694050.1\|2651793_2653296_-\|SidA/IucD/PvdA-family-monooxygenase	unknown	unknown	gnl\|CDD\|109787
NZ_AP018255.1\|WP_096686559.1\|2643032_2643620_+\|response-regulator	unknown	unknown	gnl\|CDD\|381085
NZ_AP018255.1\|WP_096686537.1\|2624017_2624992_+\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NZ_AP018255.1\|WP_096686539.1\|2625271_2626198_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096686557.1\|2641973_2642843_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|237261
NZ_AP018255.1\|WP_096686565.1\|2649775_2650861_-\|methyltransferase	unknown	unknown	gnl\|CDD\|366359
NZ_AP018255.1\|WP_096686561.1\|2643692_2643872_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096686549.1\|2637723_2638086_+\|DUF4864-domain-containing-protein	gnl\|CDD\|374400	pfam16156, DUF4864, Domain of unknown function (DUF4864). This family consists of uncharacterized proteins around 120 residues in length and is mainly found in various Anabaena and Nostoc species. Distant homology analysis suggests this family is related to NTF2-like proteins and specifically to proteins that bind small molecules. HMM partly overlaps with Tol_Tol_Ttg2 (PF05494) involved in Toluene tolerance and lumazine binding family (PF12870) and these families should form a clan.	3.9182e-49
NZ_AP018255.1\|WP_096686553.1\|2639385_2641152_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.51663e-70
NZ_AP018255.1\|WP_096686543.1\|2633151_2633634_+\|DUF4079-domain-containing-protein	gnl\|CDD\|372553	pfam13301, DUF4079, Protein of unknown function (DUF4079). This is an uncharacterized family of proteins.	9.7142e-36
NZ_AP018255.1\|WP_096686563.1\|2643883_2649511_+\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_AP018255.1\|WP_096686533.1\|2621314_2622214_+\|30S-ribosomal-protein-S1	gnl\|CDD\|223613	COG0539, RpsA, Ribosomal protein S1 [Translation, ribosomal structure and biogenesis].	1.29311e-80
NZ_AP018255.1\|WP_096686555.1\|2641741_2641876_-\|Photosystem-I-protein	gnl\|CDD\|369686	pfam08078, PsaX, PsaX family. This family consists of the PsaX family of photosystem I (PSI) protein subunits. PSI is a large multi-subunit pigment protein complex embedded in the thylakoid membranes of green plants and cyanobacteria. PsaX is one of the 12 protein subunits found in PSI and these subunits are arranged as monomers or trimers within the membrane as shown by the structure of the trimeric complex from Synechococcus elongatus.	4.8237e-12
NZ_AP018255.1\|WP_096686531.1\|2620468_2621245_+\|carboxymethylenebutenolidase	gnl\|CDD\|366780	pfam01738, DLH, Dienelactone hydrolase family.	2.26975e-59
NZ_AP018255.1\|WP_096686545.1\|2633753_2636117_+\|ComEC/Rec2-family-competence-protein	gnl\|CDD\|377126	pfam03772, Competence, Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site.	5.8764e-49
NZ_AP018255.1\|WP_096686567.1\|2650934_2651807_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.17921e-22
NZ_AP018255.1\|WP_096686535.1\|2622869_2623772_-\|TIGR04168-family-protein	gnl\|CDD\|275026	TIGR04168, Ser/Thr_protein_phosphatase_family_protein, TIGR04168 family protein. Members of this uncharacterized protein family are restricted, in 49 of 50 genomes, to organisms with a family TIGR04167 radical SAM protein, which occasionally is a selenoprotein.	4.97409e-162
NZ_AP018255.1\|WP_096686547.1\|2636474_2637620_+\|CapA-family-protein	gnl\|CDD\|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	1.06405e-67
NZ_AP018255.1\|WP_096686551.1\|2638505_2639348_-\|ATP-dependent-sacrificial-sulfur-transferase-LarE	gnl\|CDD\|224522	COG1606, COG1606, ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only].	4.62647e-129
NZ_AP018255.1\|WP_096686541.1\|2632190_2633090_+\|glycine--tRNA-ligase-subunit-alpha	gnl\|CDD\|236473	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated.	0
NZ_AP018255.1\|WP_096694050.1\|2651793_2653296_-\|SidA/IucD/PvdA-family-monooxygenase	gnl\|CDD\|109787	pfam00743, FMO-like, Flavin-binding monooxygenase-like. This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.	5.37008e-47
NZ_AP018255.1\|WP_096686559.1\|2643032_2643620_+\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	6.21933e-21
NZ_AP018255.1\|WP_096686537.1\|2624017_2624992_+\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
NZ_AP018255.1\|WP_096686557.1\|2641973_2642843_-\|lipoyl-synthase	gnl\|CDD\|237261	PRK12928, PRK12928, lipoyl synthase; Provisional.	0
NZ_AP018255.1\|WP_096686565.1\|2649775_2650861_-\|methyltransferase	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	7.24161e-44

>NZ_AP018255.1|WP_096686549.1|2637723_2638086_+|DUF4864-domain-containing-protein
MKVTEQDSTSIRFVIEQQLQAFQQDNAEEAFTFASPEIKAQFQTPENFFKMVKIGYQAVYRPRSVLFENITTIQGNITQLVLLLDPDGVPVRALYLMEKQPEGVWKINGCFLVPVEAEII
>NZ_AP018255.1|WP_096686547.1|2636474_2637620_+|CapA-family-protein
MLNRWFGKLLSVTFISVCLCVGIGIGSSIRMGKIQASDKPPKPSDSLPILPPVTEEQIFPDSITIQAVGDIIPGTNYPNNRLPRNRNQLIPLSVRKYLTNADILFGNFESSLTNYRYSAKDITRGQTFAFRSPPGYAKLFADVGFNVFNVANNHALDFGVVGFRDTVKNLKAVGINTLGHKNQILSLNSNNIKVAMVGFAPYDHYNSIHDIPTAAQLVKSAQKQADIVIVSMHAGAEGTNALRTKNNNEYFYGENRGNSVKFARTMIDAGADMVLGHGPHVPRAMEIYKGKLIAYSLGNFLGYRTLSTTAETGYSMILEAKLNQAGELIEGKIIPVHMDKQGIPHIDQNFRTVRLVRDLIKKDFPKTSMKINLKGEIIAVK
>NZ_AP018255.1|WP_096686545.1|2633753_2636117_+|ComEC/Rec2-family-competence-protein
MVQVSSVIICLAYILGLLFTTVPGSGFWILGSGVIAAMIFRKRRIPHKIPQTKQKGQIQSKSLPSNQQLLPHPRVWLIAGVIGLLASFYLQSRIPVPGANDISKYVPAGNNSNQEQLFIVRGNVTSTPRLTRASKGQFWMEAKQFDEVKNEDNKVAGSKGVSGKLYVTVPLLQATGLYPGTEVAVTGVLYKPKTALNPGAFDFQEYLNLQGAFAGLSGRQTNVLNEDNKDKKWEWWKLRQTIVRTQVAANGVPSGPLLSAIVVGSKAVDIPYDVRDLFIKVGLSHVLSASGFQTSLILAVILSLTQQAKRGTRFILGTIGLIVFVCLTGFDPPVVRATIMGFAALIALLLKRTVKQLSLLLLTATLMLIFHPLWIWDLGFELSFLSTLGLIISVPAITKRLGWLPLTIATLIAVPASAMIWTLPLQLYLFGTIPIYSLLLNIITAPLISVISLGGFLSALLSLVLPSVGSTVAGLLYHPINLLLNIAQFFGNIQFSSFALGTISLLQLISIYILIISVWLVRWWQQRWWFAFGIATALVFIPAWHYTNTLFQVTMLAANGEPVIVIQDQGKITVINAGDEGTGRFTILPFLQQQGVNQIDWAVASDFQDDGNNGWLEILLRLPVKTFYDYSATPDNTLVSSAVQKKLQNTQGAYQALGVGQSINIGTVALQLLNDQLPILQMQIQDKNWLLVGNLKPTELKNLIKGGTLPRSQVLWCPPQILTELVNTLQPEVAITTNADIDPKILSEISQTKTQLLFTGRDGAIQWKPNGQFETFIQTTENKTSAL
>NZ_AP018255.1|WP_096686543.1|2633151_2633634_+|DUF4079-domain-containing-protein
MGTKLAEILEPIAAWFRSLNVPEPIVHWGHPAMMGIVIFVLGSYVVYAGWLLRIASDKDVAIKNRADHRKLAPLMFIFMALGYTGGLLSLVMQKQPIMESPHFWTGSSVLMLLAINGAISLNGFGGNNQGLRNLHAYLGSTAFLVLIIHAILGFKLGISI
>NZ_AP018255.1|WP_096686541.1|2632190_2633090_+|glycine--tRNA-ligase-subunit-alpha
MNFQAVILQLHKFWGERGCLIAQPYDMEKGAGTKNPHTFLRALGPEPWSVAYVEPCRRPTDGRYGENPNRFQYYYQYQVLIKPSPDNIQEIYLDSLRGLGIRPEDHDIRFVEDNWEDATVGAWGTGWEVWLDGMEITQFTYFQQCGGIDCRPVSIEITYGLERLAMYLQGVEAITKIYWTDNITYGDVHLQGEIEQCVYNFEASNPEMLLTLFNMYEQEAIGLIERGLVLPSFDYVIKCSHTFNLLDARGVISVTERTRYITRIRNLARKVAQLYVEQRERLGYPLLKNTSELIHQKQL
>NZ_AP018255.1|WP_096686539.1|2625271_2626198_-|hypothetical-protein
MVDRINDILWQAQQGSVAAIIQVLNQRLASSGVRTRAMFSNGVLQLLCEARSEDRLEKSSLVNTIRQIIEQIAPRNIYKINVNSRIVREQQLLWLEEISRDPDNQLLWSEEITLEKPNALQQFVKDFQERKTEPKISFPKAQAPGAIVIYNKKKSKNSAWGWFFLGVSLCLCFGVASLAIYNLFGNHLKVPILKSNSNTPTPITKSVEPQNSNNLDEGKSQSTPNQNNLASIEDPFADAVRIANQTTASGKKARNSTQWLEVAASWQRASDLMSKVPQSHSRYQEALIRTKLYRQYSEAAQKEAEKNN
>NZ_AP018255.1|WP_096686537.1|2624017_2624992_+|quinolinate-synthase-NadA
MFTTVRSVSEKTQPGALPLDLFAAIESLKKSLNAVVLAHYYQEPDIQDVADYIGDSLQLARAAAQTDASVIVFAGVHFMAETAKILNPDKLVLLPDLDAGCSLADTCPPSEFAAFKRAHPGHLVISYINCSAEIKAMSDIICTSSNAVKIVQQIPASQPIIFAPDRNLGRYVMQQTGRDMVLWQGSCIVHETFSEKKIVQLKIAHPQSETIAHPECEEPVLRHANYIGSTAALLKYCQESSSQEFIVATEPGIIHQMQKVAPHKTFIPAPPENNCNCNECPFMRLNTLEKLYLAMKLKAPEITMDEEIRLLAWRPIQRMLEMSA
>NZ_AP018255.1|WP_096686535.1|2622869_2623772_-|TIGR04168-family-protein
MIKIAVVGDVHDQWEEEDQIALHTLGVDLVLFVGDFGNESVDVVRLVASLDIPKAVIMGNHDAWYSATEWGRKKCPYDRTKEDWVQEQLDLLGDTHVGYSKLDFDEFNLTVVGGRPFSWGGPDMKFADICKQRYNVTTLEESAARILESVKNAAYETIIFLGHNGPSGLGDRAEDPCGKDWHPIGGDFGDPDFASVISQAITTDKKIPLVTFGHMHHALRHTKRVIRKRVFKSPEGIIYLNAAAVPRIIDTNTGKQRNFSIVHMDNGVVTQASSVWVGEDFSIASLEILYEQTNQVVQPV
>NZ_AP018255.1|WP_096686533.1|2621314_2622214_+|30S-ribosomal-protein-S1
MNSETKSQKADSSFTMDDFAKALETHDYQFQKGQLVNGKVFQIDHDGAYVDIGGKASAFLPRDEASLRTVTDLSEVLPLDEKLDFVIIREQDAEGQVTISRRQLEIRHIWERLVVMKENNQSVEARVVGVNKGGVNIDVLGVRGFIPRSHLLERDNLEALKGKTLTVGFLEVEEANKRLILSQRLVTRSASFSTLSINQLVEGKITGIKPFGVFVELDGVGALLHIKQVTQKFIDNLEKVFQIGQPIKAVIIDIDESKGRVALSTRVLETYPGEILEHMEEVMATAEARAQKVKNKGIE
>NZ_AP018255.1|WP_096686531.1|2620468_2621245_+|carboxymethylenebutenolidase
MTESAIDTSTIKVSQATLIDGVAPSFELPLYAYLAYPSTPGVYPGIVVLQEIFGVNAHIRSCTERIAREGYVAIAPALFERVAPGYESGYTSSDVEIGRHYAWGQTKANELLSDIQAAINYLKTLPNVKKEGFGCIGFCFGGHVAYLAATLPDIKATASFYGARITTTTPGGGGATLERTTEIKGTLYAFFGMEDASIPADQVDQIEASLEKYRIPSRVFRYDGADHGFFCDHRKSYNPLAANDAWEKVKQLFAQQLS
>NZ_AP018255.1|WP_096686551.1|2638505_2639348_-|ATP-dependent-sacrificial-sulfur-transferase-LarE
MLNENLNEKLDKLKALFAHMEQALIAYSGGVDSTLVAKIAYDVLGGRALAVTAVSPSLLPEELEDAKVQAATIGIQHQVIQTHEMENPNYTANPVNRCYFCKSTLHDTLRPLANQLGYPYVVDGVNADDLHDYRPGIQAAKERGAFSPLAEVGASKLEVRQLSQQLGLPWWDKPAQPCLSSRFPYGEEITVAKLQRVGRAEIYLRKQGFSNLRVRSEGDTARIELPPEQIKDFVSKTDLQSVVSAFQELGFIYVTLDLEGYRSGKLNQILDKQPLLHINS
>NZ_AP018255.1|WP_096686553.1|2639385_2641152_-|response-regulator
MQQYSGIPEHNSQVDATSTLLTEIEHLRDQLWLESSLNELQSQLNECLTDFSNNLQYLESKIFKTVVDQLGLALKSSQVGIALAQTDEAAAKLCYVSMAPGSENAQVKYLKLEQVISTLELKSLSTKQRAFPITANQDNAPAGWLIIIPDPIAYGIKETINRKACKEQLLKSAVERCAAALTQVRQLQSLEQDYQDLKNYNQELQRTNQLKNQFLASTSHEIRTPLSSILGFTHLLLAQGFDPSRERHKEYLSIIQSSGKHLLALINDILDLSKIEANQMEVQWETVDIPAISRTVFALIKEKAANKGLKMVLDLDPDVTTIIADSLRLKQMLLNLLFNALKFTKSGSVGLQVRKINDYVHFVVWDTGTGIPEEYQGELFQPFSQIANTLVGRDEGTGLGLAVTRKLAELHNGYVEVESKINEGSRFVVVLPMKQSIDIKDAETKNIKNQIIEVEYPNCPIPEIISSSNAACILIVEDDVPNAKMMQIYLGKLGHKVDWVKNSTQLWEILQQHCPSIILLDIYLPDCDGFNLIKQLRGNGQYKDIIIIAQTAMAMKGDRETCIAAGFDDYICKPIDLPLLASLISKYS
>NZ_AP018255.1|WP_096686555.1|2641741_2641876_-|Photosystem-I-protein
MAPTVGKDVANTGAKPPYTYRTAWALFLLAGNLIVAAFYFHILE
>NZ_AP018255.1|WP_096686557.1|2641973_2642843_-|lipoyl-synthase
MSSNTEFKSEILALPQWLRRPIGRASELSTVQQIIKQRQIHTICEEGRCPNRGECYAQKTATFLLMGPTCTRSCAFCQVDKGHAPMPIDIEEPTKVAEAVKLLGLRYVVLTSVARDDLPDQGAGHFVQTIAKVRELNPDTLIEVLTPDFYGEESRIEAIAHCLPACFNHNIETVRRLTPRVRRGAKYDRSLRVLQIVKDVDSTIPTKSGLMLGHGETRDEIIETMIDLRSYKCDRITLGQYMRPSLEHLPVQKYWTPEEFDELGEIARSMGFSHVRSGPLVRSSYHAGE
>NZ_AP018255.1|WP_096686559.1|2643032_2643620_+|response-regulator
MASNKILVIDDTTVVRVKVREMLPPSGNFQVFEAKDGIEGLKLIQQEKFSLIMLDFLLPKMSGWEVFQQIQAQPDLRKIPLVIMSGRKEEVTEKISEPFEYFEFLNKPFDQKQLINAIKAAMAKSKQPRQDQTQVIAPATKNGATPTNGAATVATVANGAEVQALNDKIAKMQVEIDSLKKQLAQVVTFIKQKIK
>NZ_AP018255.1|WP_096686561.1|2643692_2643872_+|hypothetical-protein
MFVVKALLLPRAAFTKAFATNFMNLTEEVLFLIIQKIDVLYKFVNNYQKVGILLIENKI
>NZ_AP018255.1|WP_096686563.1|2643883_2649511_+|AAA-family-ATPase
MTVTLNTIILPGYRILEEVYLGSRTVVYKGIREKDQLPVIIKLMRNEYPTFNEVAQFRNQYTITKNLNLPGVIKTYSLENYRNGYALVIEDFGGVSLQDIRKLLNQQESSGNLGSLKSKQNNHTYLSSLLEFNNKFDFISCFLHIAIAVTAALDGIHRNRIIHKDIKPANILINPTTFEVKIIDFSIASLLPKEVKQLTNPDLLEGTLAYLSPEQTGRMNRALDYRTDFYSLGITFYELLTGTLPFTTNDPIELIYCHLAKIAKPIQSINSNIPDIICEIVHKLMAKNAEARYQSALGLKHDLELCLLFWQQGQIAPFELAQKDISDRFLIPEKLYGRETYIETLLAAFERISIPPQSPLNKGGSNGVEMVLVTGFSGVGKTAVVNEVHKPIVKNRGYFINGKFDQFQRDIPFAALVQAFRNLIGQLLSESETKIEYWKTKILAALGEQGQVIIDIIPELEIITGKQPQVQELSFSAAQNRFNLLFQNFVYIFAVPEHPLVIFIDDLQWADAASLKLIQLLMTGANISSNRSTAVLPEDSRGSTAKQDIAKSLLLIGAYRDNEVDESHPLDITIKEIQKTGTIVNYITLEPLAQKQLNSLIADTLHHQEVDTTVLTQMVFAKTKGNPFFVNQFLKYLYNEKAIQFNSETVRWEYELDKVQALSFTDDVVEFMAKELEKLPLPTQNLLKYAACISNEFDLKTLAIINQESLEDVTAKLWDALLEGLIISNQECHKFVHDRVQQAAYSLISEDEKQSTHLKIGNLLLQNTPIFQREEKIFELVKHFNVAIDLITDQATRFGLAEMNLIAGRRAMTSTAYSAAFNYLTTGIDLLAEKTWEKYELTLALYETAAEAAYLSGEFERAEQFIETVLLHAKTLLEKIKVYEVKIQAYGAQNNALKAVKTGLIVLKELGVDLAENPTQLDVQLAITETSSRLLGKKIEDLIHLPEMREALPLAAMTILSSITALAYQISLKIFTLIIIKQINICLEWGNCQTSPFSYVTYGLILSGVFEDIESGYQFGKLGESLLFKFHTKHIFAKVIAVFNQLIKHWKEHSKNTLNFLLQAYSIGLEAGDLEFAAYGLYAYSYTAYFTGQELKLLETEVAKYSNIIRQIKQERIFYWNEIYRQTILNLLGSNDNKVFHLVGEAYQEDKMLTLHQESNDGVALFFSYFCKLQLCYLFGEYYEAIENASNAEKFIYAGTGMSVTPQFYFYDSLARLAAYENFNESQQEEIQNKVYVNQSKMEKWANHAPMNYSHKLYLIQAECHRINNRYLEAINFYEHAISLAQEHGYINDEALANELASKFYIAWGKKKIAQVYMTDAYYCYIRWGAKAKVDDLLKRYPQLLAHIIEKETFSPPSIRDSNSLAQISLSTNNQQTIISSYTSISKYLDIATIIKASQALSQKIEFSELLSTLIQIVMENAGASKCALILVEGEDSGLVVSATGASSVSTSVSCQFPSMHLDDSEDVPISLINYVKRTKEIFVFDDARDVASLTGDSYIIRTQPKSLLCTPITNQGKLLGILYLENNVTVGTFTRERIQILNLLTTQAAISLENARLYKNLAEANQSLENYNHTLEEKVEARTQELNSKNQHLEQALYDLRSTQTQLIQSEKMSSLGQMVAGIAHEINNPINFIHGNIAHASNYVCDLINLIALYQQEYSPTLQIQEKHEEIDIDFLAKDLSKILDSMKIGSSRIRDIVLSLRNFSRLDEAEMKHADIHEGIDNTLMILQHQLKTKSYRPEIEVIKEYGVVPKINCYPGQLNQVFMNILSNGIDALDELAYNIQYSNYKPQIRICTELIDVNWVQFRIIDNGCGISQEVIKKIFDPFFSTKTVGNGTGLGLSISYEIIVNKHKGKLTCNSKLGQGTEFVIEIPT
>NZ_AP018255.1|WP_096686565.1|2649775_2650861_-|methyltransferase
MTFLEQYMNMSPQSIMLQASLGPILSKAIYVITKLNIADFLTSGSKNAEELAEITGTNTHYLYRIMRFLSGFGIFLEDNQGFFSLTSLSSTLRTDAPDSPRDWILFNAEPWRWGLVQAMNDVIKTGKSSYENIYGKNAYGVFAEKPEFGLTFNKAMKSWSSSLPAAVINNYDFCSAKLVVDVGGGMGDLLTLILKTYPTLKGILFDQNHVVKEVEKATNYYEIADRCLLAGGNFLTSVPVGGDLYIISSVLMDWSNEDCITILQNCYNVMAPNGKVLIIEPMIGALNEQTFGKSLDMIMLLETAGRIRDKEEWEILLNAADFRIKSIIPTNALSMYIIEAGKVGGVHPALDGANISTKIFT
>NZ_AP018255.1|WP_096686567.1|2650934_2651807_-|alpha/beta-hydrolase
MLYRNFETQAQLDAEYNPGELGIDIPAYMNCYTNNSTKCREELSCQLNIPFGPTLVEHLDIFPASQPCAPIMVFIHGGYWMMASSKEFSFVASSMMSAGITTVVINYALCPKVTIDEIVRQTRAAIAWVYRNAENFGGNPNRIYVSGHSAGGHLTAMSMITDWESDYGLPNNIIKGGCTISGLFDLMPFPYTWLQPKIQLTWGEVLRNSPIRHIPETAGSLIVTYGEEESSEFHRQSQDFLNAWKSKGLQGEYLAQSGKNHFTAIDGFLDTNSPLCKAILAQVGIACTCV
>NZ_AP018255.1|WP_096694050.1|2651793_2653296_-|SidA/IucD/PvdA-family-monooxygenase
MTIKQVCVIGAGVSGLVSAKVFLEEGYEVTVFEKQQALGGVWEKSRSYPGLSIQNPRDTYAFSDYPMPSSYPEWPSGEQICAYLESYAKHFGVMERIKFGAEVIKVEREVKNEAGWVVQVRCKDKSQQVAIEERYEFDFVIVCNGAFGISNIPTFPDIDKFISSGGKVLHSNDFNDGSLIADKRVVVVGFGKSATDIAAFAASRAKECTLVFRQALWKIPKFFLGLINVKYVLLTRFAESWMPYYKLTGWEKFLHTIGKPLVWAFWRINETLLRLQFPIDACGLLPDQPMNKLVGCSIGLVPLDFFKYVKQRKIRPIKATINKFFSGGLELGNGQSLEADVVIFGTGFKQDIPFLEDKYRRHVFDEKGLIHLYRHLIHPKVPQMGFVGYNYSGCAQLSSEIGAHWLLEYVRGNISLPSLEQMLEDVKTELEWRQKDRPYAFLNGACVTPFTFHYIDELMQDMGLETQHKSSIPLVNLMMPADPSVYKTVRQQLQSQNAIS

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Crispr_ID: NZ_AP018255_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_9

3433638-3433743

Orphan

Consensus_repeat	Method
TAGTAAAGTTTCCAAACCGGGAGTACAA	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_AP018255_9

>merge|NZ_AP018255|9|3433638-3433743|CRISPRCasFinder
TAGTAAAGTTTCCAAACCGGGAGTACAACCATTCGGATTATCCAATTGCTTAGGTTTTGAGGATTTATTGTCACCGACTAGTAAAGTTTCCAAACCAGGAGTACAA

>NZ_AP018255|9|9|3433638-3433743|CRISPRCasFinder
TAGTAAAGTTTCCAAACCGGGAGTACAA	CCATTCGGATTATCCAATTGCTTAGGTTTTGAGGATTTATTGTCACCGAC
TAGTAAAGTTTCCAAACCAGGAGTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096687529.1\|3435210_3435636_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687533.1\|3442183_3443221_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_AP018255.1\|WP_096687522.1\|3424348_3425059_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|250888
NZ_AP018255.1\|WP_096687534.1\|3443340_3443760_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_AP018255.1\|WP_096687536.1\|3447008_3447401_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687525.1\|3427093_3428014_+\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_AP018255.1\|WP_096694125.1\|3430453_3431710_+\|vanadium-dependent-haloperoxidase	unknown	unknown	gnl\|CDD\|239492
NZ_AP018255.1\|WP_096687535.1\|3445997_3446624_+\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018255.1\|WP_096687524.1\|3426164_3426977_-\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350624
NZ_AP018255.1\|WP_096687523.1\|3425033_3425813_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687521.1\|3423206_3424211_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|237667
NZ_AP018255.1\|WP_096687520.1\|3421616_3422906_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179486
NZ_AP018255.1\|WP_096687530.1\|3437497_3438970_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226196
NZ_AP018255.1\|WP_096694126.1\|3436683_3437505_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225852
NZ_AP018255.1\|WP_096687531.1\|3439076_3440564_+\|phytoene-desaturase	unknown	unknown	gnl\|CDD\|274273
NZ_AP018255.1\|WP_096687519.1\|3421027_3421297_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687528.1\|3434241_3434757_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_AP018255.1\|WP_096687526.1\|3429088_3429322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694124.1\|3428290_3428713_+\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|235069
NZ_AP018255.1\|WP_096687532.1\|3440591_3441980_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143454

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096687533.1\|3442183_3443221_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
NZ_AP018255.1\|WP_096687522.1\|3424348_3425059_-\|hypothetical-protein	gnl\|CDD\|250888	pfam01816, LRV, Leucine rich repeat variant. The function of this repeat is unknown. It has an unusual structure of two helices. One is an alpha helix, the other is the much rarer 3-10 helix.	0.00593553
NZ_AP018255.1\|WP_096687534.1\|3443340_3443760_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	9.57961e-44
NZ_AP018255.1\|WP_096687525.1\|3427093_3428014_+\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	2.64648e-37
NZ_AP018255.1\|WP_096694125.1\|3430453_3431710_+\|vanadium-dependent-haloperoxidase	gnl\|CDD\|239492	cd03398, PAP2_haloperoxidase, PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.	5.14704e-66
NZ_AP018255.1\|WP_096687524.1\|3426164_3426977_-\|M15-family-metallopeptidase	gnl\|CDD\|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	2.17152e-58
NZ_AP018255.1\|WP_096687521.1\|3423206_3424211_+\|DnaJ-domain-containing-protein	gnl\|CDD\|237667	PRK14299, PRK14299, chaperone protein DnaJ; Provisional.	1.23719e-76
NZ_AP018255.1\|WP_096687520.1\|3421616_3422906_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_AP018255.1\|WP_096687530.1\|3437497_3438970_-\|hypothetical-protein	gnl\|CDD\|226196	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.31093e-169
NZ_AP018255.1\|WP_096694126.1\|3436683_3437505_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225852	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	3.75614e-58
NZ_AP018255.1\|WP_096687531.1\|3439076_3440564_+\|phytoene-desaturase	gnl\|CDD\|274273	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_AP018255.1\|WP_096687528.1\|3434241_3434757_+\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	6.21426e-18
NZ_AP018255.1\|WP_096694124.1\|3428290_3428713_+\|adenosylmethionine-decarboxylase	gnl\|CDD\|235069	PRK02770, PRK02770, adenosylmethionine decarboxylase.	7.64865e-58
NZ_AP018255.1\|WP_096687532.1\|3440591_3441980_+\|aldehyde-dehydrogenase	gnl\|CDD\|143454	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.	0

>NZ_AP018255.1|WP_096694125.1|3430453_3431710_+|vanadium-dependent-haloperoxidase
MGAMMHIAMFEAVNLLFGSPYESYLPNAKLPSVVKGADPALAAAYAAYKVLLVTIKQQLQEVNNSTAFSPESFLIERTQPLRIGARVSSQSRTFGEAIADAILRERSNDGSQQANTPPVVKFGFTPGDWRPTDSSPAATPQWGKVKPFGGWQLNQVGDFLPKALNINKFSNYDQLLKSREYAEQVNEVQRLGKADSSERTQEQTEIAFFWANDLDGTYKPPGQLYDITQIVARQEGVEKNLLDTARLFALVGIGMADAAIIAWYVKYLFPSEKNPNNLIRLWRPESAIRLADSDNNPKTVKDPSWQPLSAMRDGTRFSPAFPAYISGHATFGAAHAVMMREFFGRDAIAFSATTEDPNAPRGISRRFTSFTEAALENGRSRIYLGVHYQWDADGGFESGTLVAEFAFNCVLRKKNNAI
>NZ_AP018255.1|WP_096687526.1|3429088_3429322_-|hypothetical-protein
MTTVIVRPSSLLSSIQIEKLDNFNLFKFDNKLQARMEELLERKKTDLLTTEEAIELEEIGELDRIFTHINAMLVAQK
>NZ_AP018255.1|WP_096694124.1|3428290_3428713_+|adenosylmethionine-decarboxylase
MALADFTTYTPQDPEVPVGVHCILELYNCPPNLLNDIEFIRNTLEEAAKTARSTLLDKIAHQFHPQGVTALALLAESHISIHTWPENGYLAADVFTCGEHAKPVEACEYIARAFKSGKHLLMKLPRGRFSPSVQPHIEVV
>NZ_AP018255.1|WP_096687525.1|3427093_3428014_+|AEC-family-transporter
MSSLAELYAKLLSLALIGFILGRTLPATVPVRLGKLLFWVGVPTSIVAFLRKTDLSGQIWIAPGIAFTAIFSGALLCWFAIRIKKTVAHTVLQKPTQGSLLLASMVGNTGYLGYPVILSLVGTQYFAWALFYDLLGTTIGAYGLGVALAAQYGGSVNNYWHITKAIVINPALWSFGAGLLIRQITLPTLVVSCLDFVAWSSIAASLILIGMRLSKLTSWGSLKLASISLTIKMIVVPMILGLSLSSFGLTGKTAQVLVLQMAMPPAFATLVLAETFNLDRELAVTALAVGSMILLITLPIWLWFFR
>NZ_AP018255.1|WP_096687524.1|3426164_3426977_-|M15-family-metallopeptidase
MSNAGFSGKPQKPSPDSGEDIPAALRDASDVAPQKGKLPILILGGVGGFVLLAILSGFIFFITAPKKSAQEASTPSTTASPSINSGDTQAKANGSLLGHLPYPEAPESELAPVSNDGRFRMRKAAAQQFLAMQQAARSAGVNLTVISAFRSVKEQEQLFFAVGAQRNQTPAERAALSAPPGYSEHHTGYALDIGDGNVPATNLSANFEKTKAYEWLSQNAAKFSFELSFPIDNIQGVSYEPWHWRFVGDRQSLETFYKAKNLKPVQAPKK
>NZ_AP018255.1|WP_096687523.1|3425033_3425813_-|hypothetical-protein
MDLIPEQQACNQNTTPEQLRALAAQSTQLARLVCTNPNAEPGLLRELANRSDYKILSAVANNPNTPTDVLWKVGVEFPEEVLSNPVFPLLLLENPNLVEEIPDNTLESFLKVDIVPDSLIKWVINSKKQDDLALAVTMNPKTSKDILEKLVNQDITFEYHHINYEHIIDSAKLHVNWSSEVKANWQEEAFTIMQNTVFGRSLRDFIAYQIGLIPESLMIKFSYYIFAYLPKNSKSCFRICYYSSSKYIRRNIAAICKTS
>NZ_AP018255.1|WP_096687522.1|3424348_3425059_-|hypothetical-protein
MQRFAKHRKANIRLLITKNPKTPINLIEIFIEDKNKLVRESALVVYQQNFSEEKDINLDEQLQIVQNMNTASGILDEIATSKWLIIRERVAIHGNTSIHTLTKLSEDKATHVQLAVAQNPNTPDEILEKLANRHKWNTEVHTTAVKNLILRGSERASKFIGRYIKDSPFSLSRLFALLHPLAPTHLLIKNYRSSYWLERYAIAQNPNTPSYIRQLLTQDANRIVRAAAKASGKSNE
>NZ_AP018255.1|WP_096687521.1|3423206_3424211_+|DnaJ-domain-containing-protein
MAATDFKDYYSVLGVSKTASQDEIKQAFRKLARKYHPDVNQGNKQAEAKFKEINEAYEVLSDPDKRKKYDQFGQYWKQAGQGFPNGAGAGVGVDMNGFDFGQYGSFEDFINELLGRFGGPGGAGARSQSYSYRSTGGASGFDGFGFQQDFGGASGVQDSEAMISLTLGEAYNGVEKRLQVANDVITVRIPAGAKTGSRLRVRGKGPTNPQTKQRGDLYLKVQLQPHSFFQLDGDNLVCEVPIAPDEAVLGASIDVPTPDGTTAKVNVPAGIRSGQSLRLRGKGWVLGKGGRGDLLIKITIVAPKDLSQQERELYEKLRAIRSYNPRISLNNVRL
>NZ_AP018255.1|WP_096687520.1|3421616_3422906_+|glucose-1-phosphate-adenylyltransferase
MKKVLSIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIYKIYVLTQFNSASLNRHIARAYSFAGFSEGFVEVLAAQQTPENPSWFQGTADAVRQYLWLLEEWDVSEFLILSGDHLYRMDYRLFVERHRQTGADITLSVIPMDERRASDFGLMKIDDSGRVIDFSEKPKGDALKQMQVDTSVLGLTLEQAKLQPYIASMGIYVFKKDVLIKLLKESLERTDFGKEIIPDAASYHNVQAYLFNGYWEDIGTIDAFYHANLALTQQPLPPFSFYDEQAPIYTRARYLPPSKLLDCQITQSIIGEGCILKNCRIEHSVLGVRARVDSGCVIEDSLLMGADFYQTSVERKSFWDQGNIPTGIGADTIIRRAIIDKNARIGQGVRIINKDNVQEANREAQGFYIRSGITVVLKGAVIPDGTVI
>NZ_AP018255.1|WP_096687519.1|3421027_3421297_+|hypothetical-protein
MNYQKLDAALAMAVSEVEDPQEPSLVVFIHTDNLDTQAITFLNRLGIKGVTNNTDIYTATVSSSTVSELSQQPWVKSIKLSQKLRLVKS
>NZ_AP018255.1|WP_096687528.1|3434241_3434757_+|peptidoglycan-binding-protein
MTTTIQCPTFRPTLRIGNNGQDVKEMQKRLNQRFASIYTPALEIPVDGDFGSQTEAALKYLQCLAFLPVNGITDTTTWNFICNGSASLPTLKLNSSGNAVQSVQRALFISNFYNGAFDGVFGTKTAQAVKDFQTFYGLTVDGVIGANTWTTLIKLDSHIDRCYCDYYGGGC
>NZ_AP018255.1|WP_096687529.1|3435210_3435636_-|hypothetical-protein
MQKSFLIPTTSLLVCVTTILSSFSPSFAQNPSQGTQGQRRPEVTSFECRGFSPTIFKITLNKNKTYTIQSRAVGKKPTNISKNLVGGKYVSFRKGFRFKTGELKNQSILRQDNNIYLVRTKDEARAAEVAAADGAAFCQQL
>NZ_AP018255.1|WP_096694126.1|3436683_3437505_-|class-I-SAM-dependent-methyltransferase
MNKQTVNLGIVQETLLIPLWSRAVEASQPKPILYDAKAKEIVSQLDYDFDKFKAAKSTQVMMCIRGKAIDELTQHFIQQNPQSTIVEIGAGLDTRFERLDNGQLYWFDLDLPDAIAVRRHFFEESGRRHFISGSVLEPEWINQVKQNSPNSPKLFIAEGVLLYFTEEQVKTLFAILAQEFPGSYLVFDAASPFIIKNRRSYEAVKHTSAKFQWGIKNIKDIEAWDSRYKITDSRYIWHFPEFKKRFSFNARLLMAILPPLTRSYAVHLASILK
>NZ_AP018255.1|WP_096687530.1|3437497_3438970_-|hypothetical-protein
MVQNSAFLDFETKLGKELKNTHRAWKQAIVEPGEEFPPTPLPVLEGKIPECLRGTLYRIGPGRLSRGGIHVGHWFDGDGAILRVHFGDDGATGLYRYVQTKGYQHEVVAGKLLYGNYGMIAPGRFWNHFLRPLKNVANTAVIALPDKLLALWEGGKPHALDLETLETKGIDNLGALKGGLTYSAHPKRDPQTGEIFNFGVTGKFKGSLNLYKSDSTGKILVSKAFPLDWLPLVHDFVLAGQYLIFFIPPVKVHGLPVGLGLRSYGNSMTWEPKSGTQILVFDKQTLSLVSRNETEGFFLWHFGNGYVDDNGMVMIDFAGYEDFNINQRLKELPTGELQTPTKSGLWQLILNPKTGKVKAVEKGYNHLAEFPMVSPLETGQKWQYTYFLGFGKGTNTTEEFFNAIARIDYKTDSLTIADLGENRYPLEPTYVANPINPQSGWLLTIVYDGNNHTSEVWIFDSEHLDDEPVCKLGLPSVIPLGFHGIFKKYE
>NZ_AP018255.1|WP_096687531.1|3439076_3440564_+|phytoene-desaturase
MKIVIIGSGFGGLSAAIRLQAQGHKVTLVEKQSEPGGRAYVYTLDGFTFDAGPTIITAPYLLDELFQINGRRVEDYVQLVQLDPFYNIRFSDGSVFHLTGNREYILQQIRSFNSQDIQGYYRFEQALEKIFKKVMPLMEQPLNNFCELIKFAPNIIGLQPLQSVASFVNQYFQDERLQQVFSFHPLWIGSNPFTTSSIFTTIHELERKFGVWFAMGGTGALVNALVQLFCELGGKLLLNTPVAEIAMNYKTGYATGAILANGKYLPSDIVVSNADVAFTYMNLVPAKFRHHYSLSKFERMRHSMSVFVIYFGTNRRYQHMAHHEMLMAPEYHNFMQDIFERKHLPSYFCLYLHRPTATDASLAPLGCESWYALVPVPNLSGQTDWEANSKPFRNKVIQHLEHCYLPDLSKHIVTEHSINPLYFRDTLNSFQGSAFAMESTFRQSGWFRPHHQSEDIPNLYFVGAGTHPGAGLPSVMTSGKIVARMIGKAGESANS
>NZ_AP018255.1|WP_096687532.1|3440591_3441980_+|aldehyde-dehydrogenase
MIYQLSISDIICKQRKFFQSGTTKDFAFRLAQIKILKQAIIQHQTDITHALLADLNRAEVETYGTEILLILSEIDYAIKNLKQWMQPQKLATSIQQFPASARIYPEPLGVVLIIGAWNYPFQLTLSPLVGAIAAGNCAIIKPSELASNCSRVTAEIISKSFASEYISVVEGGVETSQLLLAEKFDHIFFTGGTAIGKIVMEAAAKHLTPVTLELGGKSPCIVDADTNIECTAQRIVWGKFLNAGQTCVAPDYLLVNKNIKPQLLTAIQKSIKEFYGDNPAKSLDYGRIINHKHFDRLVNFLQDGNICIGGESNKNECYIAPTVIDNISLTSAVMQSEIFGPILPIIEYSDINEAISIINSQPKPLAVYLFSQNKKLQHRILQNTSSGGVCINDTVMQAAASGLPFGGVGDSGIGRYHGKTSFETFSHYKTVLQRSFLFNIKLRYAPYKGKLQWLKRIVGSNI
>NZ_AP018255.1|WP_096687533.1|3442183_3443221_-|NADP-dependent-oxidoreductase
MSTNVENTPKRVNRQFLLACRPVGDIKESDFEYKEAPVPTPNQGEVLVRNLYLSLDPTNRIWMSDMAQYMPPVELGEVMRGVAIGVVEESKNPNLQPGDYVTGLLGWQDYVLLKDEQANFITKINPPLPDPLFAAVGQLGPTGVTAYFGLLDIGQPKPGETVVVSAAAGAVGSVVGQIAKIKGCRVVGITSSDEKCQWLTSVGFDAAINYKTTDLNTALANACPNGVDIYFDNVGGSILDTVMSHLNLFARIPLCGLISTYNSTQPVPGPLNFNLILMKRLRVQGFIISDYHNRWHEAIKELGEWTKLGKIKQEYEIVEGLEKAPKEILKLFNANKIGKLIVKVA
>NZ_AP018255.1|WP_096687534.1|3443340_3443760_-|IS200/IS605-family-transposase
MFMTNLRSGSHVVFSIHLHVVFVTKYRRKVFTNQMIEDMKEVFDRVLVANKSNLEDCNGEPDHVHLLIDLHPDNNISDLIASLKSASSRILRERYKSTIDKYYWGKAKLWHDSKCIVSCGGAPLETVKQYIQNQSGGRE
>NZ_AP018255.1|WP_096687535.1|3445997_3446624_+|hypothetical-protein
MSYSDFKDLDSLNSLGITTIESVQNLIFSEPIEPSSFLIEALKRFVPLATAINTEKARSEYIIAPILSEIAFINSQVSLFSGRNFNVDASRGLTGFCDFILTRNPDKLVIKAPVAVIVEAKNENINDGLAQCIAEMYAAQIINQKNLEENINTVYGIVTTGQVWRFLSIDKTMLVKVDLNERYLTPLNELLGILVAITSIPNSIFEGS
>NZ_AP018255.1|WP_096687536.1|3447008_3447401_+|hypothetical-protein
MINCNWVFKIGLTAFLATIGVWISLESSAKAQNAGTITINSGNIVLNKDIPTGSITTINDDIPILINNPVLTTNGGDISSNPTNSISNGGNIIIITGDIKIISIPEPDSVGGILAFAATVAVLIRHKRKC

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Crispr_ID: NZ_AP018255_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_10

3563535-3563640

Orphan

Consensus_repeat	Method
GAACGAGTACTACTGGTTAACTCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_10

>merge|NZ_AP018255|10|3563535-3563640|CRISPRCasFinder
GAACGAGTACTACTGGTTAACTCAACAGGTAGTACCATGCACCATTTGGTTAATTCAACCTGAAACAAAAAATGGCGCCTGAACCAGTACTACTGGTTAACTCAAC

>NZ_AP018255|10|10|3563535-3563640|CRISPRCasFinder
GAACGAGTACTACTGGTTAACTCAAC	AGGTAGTACCATGCACCATTTGGTTAATTCAACCTGAAACAAAAAATGGCGCCT
GAACCAGTACTACTGGTTAACTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096687632.1\|3552265_3552766_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_AP018255.1\|WP_096687640.1\|3561902_3562541_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_AP018255.1\|WP_096687649.1\|3570343_3571783_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_AP018255.1\|WP_096687650.1\|3571912_3572731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687639.1\|3561165_3561876_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225158
NZ_AP018255.1\|WP_096687648.1\|3569226_3570243_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224213
NZ_AP018255.1\|WP_096687635.1\|3555825_3556101_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225196
NZ_AP018255.1\|WP_096687638.1\|3560616_3561090_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687641.1\|3562537_3563485_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236011
NZ_AP018255.1\|WP_096687644.1\|3565560_3565779_-\|DUF3148-domain-containing-protein	unknown	unknown	gnl\|CDD\|371482
NZ_AP018255.1\|WP_096687634.1\|3555512_3555734_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687633.1\|3553003_3555403_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_AP018255.1\|WP_096687646.1\|3568129_3568852_+\|mitomycin-antibiotics/polyketide-fumonisin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|368580
NZ_AP018255.1\|WP_096687642.1\|3564245_3564740_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694136.1\|3566851_3568048_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_AP018255.1\|WP_096687647.1\|3568955_3569183_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687645.1\|3565927_3566371_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687637.1\|3558799_3560563_+\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NZ_AP018255.1\|WP_096687643.1\|3564847_3565402_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239315
NZ_AP018255.1\|WP_096687636.1\|3557072_3558629_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|224185

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096687632.1\|3552265_3552766_-\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	8.8601e-14
NZ_AP018255.1\|WP_096687640.1\|3561902_3562541_+\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	8.01398e-93
NZ_AP018255.1\|WP_096687649.1\|3570343_3571783_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NZ_AP018255.1\|WP_096687639.1\|3561165_3561876_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|225158	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only].	3.00734e-59
NZ_AP018255.1\|WP_096687635.1\|3555825_3556101_-\|hypothetical-protein	gnl\|CDD\|225196	COG2314, XynA, Predicted membrane protein [Function unknown].	0.000297308
NZ_AP018255.1\|WP_096687644.1\|3565560_3565779_-\|DUF3148-domain-containing-protein	gnl\|CDD\|371482	pfam11347, DUF3148, Protein of unknown function (DUF3148). This family of proteins has no known function.	2.01851e-37
NZ_AP018255.1\|WP_096687641.1\|3562537_3563485_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236011	PRK07399, PRK07399, DNA polymerase III subunit delta'; Validated.	3.97166e-161
NZ_AP018255.1\|WP_096687648.1\|3569226_3570243_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	7.17988e-94
NZ_AP018255.1\|WP_096687633.1\|3553003_3555403_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP018255.1\|WP_096687646.1\|3568129_3568852_+\|mitomycin-antibiotics/polyketide-fumonisin-biosynthesis-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	5.09922e-06
NZ_AP018255.1\|WP_096694136.1\|3566851_3568048_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.84872e-61
NZ_AP018255.1\|WP_096687637.1\|3558799_3560563_+\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	7.63961e-126
NZ_AP018255.1\|WP_096687643.1\|3564847_3565402_-\|peroxiredoxin	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	1.93817e-64
NZ_AP018255.1\|WP_096687636.1\|3557072_3558629_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|224185	COG1266, COG1266, Predicted metal-dependent membrane protease [General function prediction only].	4.13254e-22

>NZ_AP018255.1|WP_096687641.1|3562537_3563485_+|DNA-polymerase-III-subunit-delta'
MTDFFAPLVGQQQAVELLKQAVAKNRIAPAYLFTGADGVGRSVAARCFIKLLFSNQSDNLLSDSTTKRLQQGNHPDVLWVQPTYQHQGQRYTPKEAAEKGIKRKAPPVIRLEQIREITAFLSRPPMLAPRSAVVIEQAETMAESAANALLKTLEEPGKATLILMAPSVDAILPTIVSRCQRIPFHRLDTSGMTEVLTLTGHQEILEHEAVMSIAAGSPGEAIASYKQMQAINSDLLQSITKAPANYRECLELAKQIEKELETEAQLWLIDYLQQSYWQQQHQPSIIKLLEQARKNLLCYANPRLVWECTFLKMLG
>NZ_AP018255.1|WP_096687640.1|3561902_3562541_+|dTMP-kinase
MQGKLIVFEGVEGCGKTTQIQLTSEWLLMKGVPVIVTREPGGTPTGRHLRRLLLEANNNAIDPRTELLLYAADRAQHVEQELKPNLAAGKYILCDRFIYSTIAYQGHGRGLDMKLINQLNTIATAGLEADLVVWFDIDVETGLARKRRSAYVADRIELELIDFHHRVQQGYTILASMYPEKIVKINANQDINTIQSQIQQVCIQRLPDLPIK
>NZ_AP018255.1|WP_096687639.1|3561165_3561876_+|NAD(P)H-dependent-oxidoreductase
MKVFIVHAHPEIQSLNSALTRHARDILQQTGHEVIISDLYSMNFDPVSDRRNFTSQKDSEYFKQQNEENYATANDSFSLDIKAEMEKLFWCDVLIFQFPLWWFGLPGILKGWVDKVFAAGKIYGSGKWYDNGVFQGKKAMLSLTTGGKLPMYTEVGLHGDIHSILYPIHHGILRYVGFDVLPPFIVFGVTKINDERRKGYLREYEERLLSINETYPIIYPALADFDENFQLKSSNS
>NZ_AP018255.1|WP_096687638.1|3560616_3561090_+|hypothetical-protein
MNDVISENHIQALQFIIPIFEQNDITYRITGGLAGNLYGSLWELHDIDLEVAQKDIELVAELFKEYIAIDLMRLVDDEFDLLMMTLVIHGVDIEINQAEEAFIYHDDTPVKLDDDLSAFHTFYFEGLKLKVKPLKQIIEYKQLLGRHNDVIDLITLT
>NZ_AP018255.1|WP_096687637.1|3558799_3560563_+|precorrin-3B-C(17)-methyltransferase
MLQKAAIIVLNQNSVALGRQIASALRGGTVYGLVKRTKEVDIGFENFGDTLRELFASGTPIVGVCAAGILIRSLAPIISDKRQEPPVLAVAEDGSAVVPLLGGLQGVNDMARLIAAALEVPPAITTTGDIRFRTALLAPPKGYYLANPESAKGFISDLLAGAKVKLQFNTQENLNWLIDSKLPFDANGELEIRITEYQTDYTPDCLVYHPATLAIGVSLNGSNVEDAVVIVRQLLASARLSEKSIAGVFARDQDAAQPAINEIARVLDVPLRLLELGNIQGVQQKDIESQDKMAELLALTAAGTSGKLLTQVSNSTVSIAIASSASVIDADIIGKPRGKLYIVGTGPGAAAWMSPEVKRILNEATDLVGYSFYLDLAGALRPGQRRHEFDNREELARAKMALDLAAEGRNVVIVSSGDPGIYAMAAAVFEVLDSNLVQEWQRVQVAVAPGISAVQAAAAKIGAPIGHDFCVISLSDILKSWSIIERRITAAAASDMVIAFYNPASKQRTWQLKEARDILLKYRLPETPVVLARNLGREGESIMVRTLGELSVLDVDMRTLVLVGSSKTRVVEHCEGVWVYTPREYLE
>NZ_AP018255.1|WP_096687636.1|3557072_3558629_-|CPBP-family-intramembrane-metalloprotease
MTLKRIILIVLTVLAILTSGSRLYETLQEPQYQSRLELYQTDIVLQAQEWKPEDDKNNYQGAQNAILGANPTESAAQQYEKARQKAKSAIEKTKDRIEMRQPITQPENQVNSKLIAQNQLESKVLLKSLDEQQKTLTELELRLGVLQAELSKTQLALDTWEQVAQRQLIYPEMSKTARVLSGLWGNQKQLLPDAQELIQSQLNGWFRTRALYQLYTLQERNDALKTLEVSQQQQAEKALLQLSIVGVVPNLAGLIGLIMLIFLLVQRLLKGKESLLAHNSTLSWSTPWNAETILQVFVGGFFFMGQILVPLFFSLLPLPRPAGNIRLQAIYVLITYILLAAGSISVLYFSIKPFSPLDNDWFRFRLGGKWILWGLGGYCVAIPIVLFVSLVNEQIWRGQGGSNPLLQLALEAQDSVALGIFFITAAIAAPLFEEFLFRGFLLPSLTRYMPVWASILVSSFIFAAAHLSLSEILPLTSLGIILGVVYTRSRNLLAPMMLHSLWNSGTLLTLFVLGSSNN
>NZ_AP018255.1|WP_096687635.1|3555825_3556101_-|hypothetical-protein
MANLTPSHATKQLLSGYCGIIFGGLGIHKFVLGYSAEGSIMLVISILGAIFAYGIPFIVMQLVGLVEGMIYLNKSHEEFVDTYFAKKQGWF
>NZ_AP018255.1|WP_096687634.1|3555512_3555734_-|hypothetical-protein
MMLLKNKKLILGICLLCSMGYFGAVSNAEVNSFLRGELILIPLQALALIYVTFFRTGRKPIPQEWSFHKNFKI
>NZ_AP018255.1|WP_096687633.1|3553003_3555403_-|copper-translocating-P-type-ATPase
MQLVSKTDLPKENTQIQGNEKITLDIAGMKCAGCVRNVERTLTQYPGVVTSSVNLATSVAVVESSGVDAFALAKHLTAAGFPSQPRPKRSPSGTKNQSKEARSASINLFIAAFLLVVSSLGHFSNIFDTFLPGLDNIWFHCGLATLTLLIPGRSIVIDGWLGIRRGAPNMNTLIALGSVTAYTASLIALLFPQMGYSCFFDEPVMMLAFILLGRTLEQRARTRAAAAFTNLLELQPVQARLIGNKDGDSSLSNLISSNNVVEIPAEQVRIGEWLQVLPGEKIPVDGEIVQGQSTVDESMLTGESVPVIKRPGDSVTAATLNQSGAIVICATRTGADTTIAQIIALVEAAQTRKAPIQKLADTVAGYFTYFVLTAALLTFLFWYFIGAHIWTDIAPITTAISHHSAQTRLIASLPQHSALSTHHSPLLLSLKLAIAVMVVACPCALGLATPTAILVGTAMGAERGLLIKGGDVLEKVHKLDTIVFDKTGTLTSGKPTLTDCIALEEIEEKNLLELAAAVESGTYHPLAIAIQTTAKEQQLTIPNAVDFHTEPGFGVSAVVDDKIVFLGNYEWLSWQGITVHETAVDKARELASVGKTVVYLAYDGKVVGLLAIADTLRPEAKTTVEKLRSLGLRVMILSGDRIEVVNTIATELGIETTDVVAGIPPAKKASAIQMLQQSSQVAMVGDGINDAPALSQADVGIALHSGTDVAMETASIVLMRDSLTDVVESIKLSRATFNKIRQNLFWAFAYNTIGIPLAAGILYPLLGFVLNPSGAAALMAFSSVSVVTNSLLLRQLKRS
>NZ_AP018255.1|WP_096687632.1|3552265_3552766_-|FHA-domain-containing-protein
MAVNNTQSIFTNQSSTDFGNDLSMAAEINESHLLIIEDDQGRKEVTLERPVYSIGRDRECDICLNSQFVSRRHAVLVRLPRDDNSQSYYYRIVDGDSKGKPSANGLVINGRKLPAHDLKNEDEVVFGPQVRAIYYLLKDSMRTGQTDASEYDITLINPGMTDDLDD
>NZ_AP018255.1|WP_096687642.1|3564245_3564740_-|hypothetical-protein
MDLESQNTAQTATESFEFAEPTHRKSLEILRDAEALLRRPTVAAIVPILPANISRRLEEANIVADNTLNELAEIDVEQISDWELRPARIQVGLSFVGFSALMVIILLLYLNTLHPELNPVEQVAKYWHQYIWFVNVGVAGMFVLGREAMRPVQKPKKRKRKIYR
>NZ_AP018255.1|WP_096687643.1|3564847_3565402_-|peroxiredoxin
MVSRRNFLNIVLVGCLTFLCWFNLAPVAHALGGKLPEINKPAPNFTLPTNTGNGTIGLKDLRGKWVVLYFYPKDFTSGCTIEARRFQEDLPKYIQKNAEVIGVSADDIDSHAEFCDSEGLKFPLLADTTGAVSKAYGSWMSFISMRHSFIIDPQGTLRETFVKVNPNIHSKEVLARLNELQQTS
>NZ_AP018255.1|WP_096687644.1|3565560_3565779_-|DUF3148-domain-containing-protein
MSKEFIVGSKVRVVALPPYVKTADTMPMLRPPEIIQLGEEGIVIDRRPGGYWGIRFTRGTFLIDSQYIESVE
>NZ_AP018255.1|WP_096687645.1|3565927_3566371_-|hypothetical-protein
MKFTHLPILAGAIALTLTAIPFSANAKPVQQLAQGAQQQPAIAPPPSIQLTKKQQDQVKVINADVRKQIEGVLTPQQRERLKKSLQAKRDPQQITQDLQLTQDQGRRLQQIVAGSQKKIFETVLTPQQQNQIRQYYQSRQNSGAKPR
>NZ_AP018255.1|WP_096694136.1|3566851_3568048_+|sensor-histidine-kinase
MSNSIQFKNHPFRFLLYLEWALLTIAILSSLAPTPWIRRSQDFPELTICSLIIFGLMGLRLPKNNQLSKIIYTACELCLILITIFFGGRASRLFPFIYLILVTRSCLIFKLPGRLVVTSLSFSLFLFTIFRKFNKFPVSPVAQERFKFFTLSFVVLFALALIFVLLLMNTIVSERQSREKLAAANQKLKQYAIKVEYQATLEERNRIAREIHDSLGHSLTALNLQLETALKLSQSNPVKAHDFLARAKELGSKALQDVRQSVSALRLHPWQGESLEQAIVILMEDVERATSVQPQYVINLTVPLSSELSIAIYRIIQESLTNICKYANATKINLELLIVNSELHLKIQDNGAGFDLNQNTKGFGLHSMRERTEALGGKFNIETSPRQGCTIQVIIGQT
>NZ_AP018255.1|WP_096687646.1|3568129_3568852_+|mitomycin-antibiotics/polyketide-fumonisin-biosynthesis-protein
MTEFERYLFDLQGFIVIENALSSEQVAVLNSYLDKQKQLQQNATKYRFDCLLSWGKPFRDIIDNPRVTPYLSELLGHEFRLDHDYVHIIREGAGPIGSSLHGGGNPYDPSQYYEFKHGKMYNGLTAVAYELSDVNQGDGGFACVPGSHKSNYPFPQAWGNLETPHSCVKTISVKAGSAIIFTEALTHGTLPWQGKNERRTLFYKYSPQFIAWARYYYNADNFPDLNASQRRILRIPGISL
>NZ_AP018255.1|WP_096687647.1|3568955_3569183_+|hypothetical-protein
MKQFPTKSYTNTQTHYQNPSLVNFYTYTSIVLGVLGVLVTLKIVIRKQQHTHKLQQQIKKLEKIYLLEHKDQNIK
>NZ_AP018255.1|WP_096687648.1|3569226_3570243_-|cytochrome-d-ubiquinol-oxidase-subunit-II
METLKYFLPQVWFGILALFLFLYVMLDGFDLGVGILSLTASDEERRGILMTSLSNIWDANETWLVLMGGSLFGAFPLAYATILNALYIPVSIMLFGFIFRAVAFEFREHANRKLFWNYAFGIGSFLAALGQGFALGAVLKGVVVDEAGHFVGTTWDFLSWQSVLVALTLIQGYVLIGSTYLIWKTEGELQETHYKTAKLAAYTTLIGAIFITISTPVFYQSARTKLFEAPLVYIFAIIPFIGIWLIWQLLGSLGKKQDRAPFVWTILIFVLTFIGLALVIFPYIIPTEITIYEASADPSSLVFMLIFVGFLIPIMIFYNIYQYVVFRGKITSHQYGGE
>NZ_AP018255.1|WP_096687649.1|3570343_3571783_-|cytochrome-ubiquinol-oxidase-subunit-I
MFFENTVVLSRMQFALTALFHMLWPVLTTGMGIYLVIVEGLWLKTRNSDYYYHARFWSKLYILNFGIGVATGIPMEFQFGTNWAPFSEAVGNFFGSIMGFEATWAFMLEAASLGIMVFGWERVNPIIHYIATILVAVGANMSTFWILVANSWMQTPAGGKLVDGKFIISDYFEAIFNPFMKVSILHMFFATLETSLFVIGGISAWYIINKRNAAFFSRSFKIVIAAVILVAPLQIYIGHLSAEQVYHRQPAKLAAMEARWQTIPAGESADYSLVALPNDKAEKNDWELSIPNALGFVLEFKQKLSEPVLGLKEFKPENRPHLVGLIYYSFRTMIGIGFALAGLMLITVLQWLRGKLSTENITEQKWLLRAWLLAAPLGYIAIDTGWIVRCVGRQPWTVYNQLRTVDSVSKLPPSHVLVTLVAYATVYAMLLFTALYFGSRIIRKGPNLNLPIPGIESQPALDTAPAEFIPDERPVEAQQ
>NZ_AP018255.1|WP_096687650.1|3571912_3572731_-|hypothetical-protein
MTYQIETDRSPKRRGVVQSIWDVGVISALVILAFSAQAGNNGQQNAYSPARPVTAAQVVSSPRDFIGKTVTIRSKPTQRLEANSFKLKDGLFSQQEPLLVVNTSGTPLNLPADNVDIQVTGRVRDFVISDIERDYNLNLNDDLYGGYVRKPVLVADNIALAPQPNQVAQAPQQYYGKTVAVTGEVEKTNTPILITLHKDQFIRGRSLPVLLTSSPKVAINKGQQVAVVGEVRPFVANDIEREYNFAWDANVKRQLEAEYQNTPVLIAEAVYP

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Crispr_ID: NZ_AP018255_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_11

3676348-3676464

Orphan

Consensus_repeat	Method
AGTTGCAAATAATCCTGGTTGAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_AP018255_11

>merge|NZ_AP018255|11|3676348-3676464|CRISPRCasFinder
AGTTGCAAATAATCCTGGTTGAAACCGATGATTGCAGGTTGGTTGCATTTAATTCTGGCTCAGTTGCAATTAATCCTGGTTGAAGCGTAATTATAATTGCAAATAATCCTGGTTTGC

>NZ_AP018255|11|11|3676348-3676464|CRISPRCasFinder
AGTTGCAAATAATCCTGGTTGAA	ACCGATGATTGCAGGTT
GGTTGCATTTAATTCTGGCTCAG	TTGCAATTAATCCTGGTTGAAGCGTAATTAT
AATTGCAAATAATCCTGGTTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096687727.1\|3671097_3671517_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350229
NZ_AP018255.1\|WP_096687731.1\|3676507_3677689_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368927
NZ_AP018255.1\|WP_096687724.1\|3667187_3668759_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223540
NZ_AP018255.1\|WP_096687725.1\|3668790_3669030_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
NZ_AP018255.1\|WP_096687722.1\|3664042_3664693_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687721.1\|3661665_3662694_+\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|259986
NZ_AP018255.1\|WP_096687739.1\|3686271_3686904_+\|cupin	unknown	unknown	gnl\|CDD\|227840
NZ_AP018255.1\|WP_096687736.1\|3682013_3683933_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369942
NZ_AP018255.1\|WP_096687734.1\|3680103_3680955_-\|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
NZ_AP018255.1\|WP_096687723.1\|3665216_3666283_-\|ISKra4-family-transposase	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687735.1\|3680985_3681543_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|223600
NZ_AP018255.1\|WP_096687740.1\|3686882_3688721_-\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_AP018255.1\|WP_096687729.1\|3673724_3675350_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_AP018255.1\|WP_096687738.1\|3685441_3686260_+\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|378389
NZ_AP018255.1\|WP_096687737.1\|3684846_3685449_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|237125
NZ_AP018255.1\|WP_096687730.1\|3675339_3676311_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225806
NZ_AP018255.1\|WP_096687733.1\|3679698_3680040_-\|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|239247
NZ_AP018255.1\|WP_096687726.1\|3669487_3671002_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687732.1\|3678030_3679137_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214671
NZ_AP018255.1\|WP_096687728.1\|3671513_3671867_-\|HicB-family-protein	unknown	unknown	gnl\|CDD\|224514

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096687727.1\|3671097_3671517_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.06895e-30
NZ_AP018255.1\|WP_096687731.1\|3676507_3677689_-\|hypothetical-protein	gnl\|CDD\|368927	pfam06468, Spond_N, Spondin_N. This conserved region is found at the in the N-terminal half of several Spondin proteins. Spondins are involved in patterning axonal growth trajectory through either inhibiting or promoting adhesion of embryonic nerve cells.	4.40177e-06
NZ_AP018255.1\|WP_096687724.1\|3667187_3668759_+\|ATP-binding-protein	gnl\|CDD\|223540	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].	5.30163e-45
NZ_AP018255.1\|WP_096687725.1\|3668790_3669030_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	1.29982e-09
NZ_AP018255.1\|WP_096687737.1\|3684846_3685449_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|237125	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional.	3.12819e-90
NZ_AP018255.1\|WP_096687721.1\|3661665_3662694_+\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|259986	cd13919, CuRO_HCO_II_like_5, Uncharacterized subfamily with similarity to Heme-copper oxidase subunit II cupredoxin domain. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is diverse in terms of electron donors, subunit composition, and heme types. The number of subunits varies from two to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian cytochrome c oxidase (CcO) are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. It has been proposed that archaea acquired heme-copper oxidases through gene transfer from gram-positive bacteria. Subunit II is found in CcO, ubiquinol oxidase, and the ba3-like oxidases, while the cbb3 oxidases contain alternative additional subunits. Additionally, nitrous oxide reductase contains the globular portion of subunit II as a domain within its structure. In some families, subunit II contains a copper-copper binuclear center that is involved in the transfer of electrons from the substrate to the binuclear center (active site) in subunit I.	4.3622e-48
NZ_AP018255.1\|WP_096687739.1\|3686271_3686904_+\|cupin	gnl\|CDD\|227840	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only].	3.73439e-40
NZ_AP018255.1\|WP_096687736.1\|3682013_3683933_+\|hypothetical-protein	gnl\|CDD\|369942	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal. Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.	5.35149e-10
NZ_AP018255.1\|WP_096687734.1\|3680103_3680955_-\|cytochrome-c-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	1.13983e-40
NZ_AP018255.1\|WP_096687735.1\|3680985_3681543_-\|thioredoxin-family-protein	gnl\|CDD\|223600	COG0526, TrxA, Thiol-disulfide isomerase and thioredoxins [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	4.12733e-12
NZ_AP018255.1\|WP_096687740.1\|3686882_3688721_-\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.49249e-77
NZ_AP018255.1\|WP_096687729.1\|3673724_3675350_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.69828e-07
NZ_AP018255.1\|WP_096687738.1\|3685441_3686260_+\|anti-sigma-factor	gnl\|CDD\|378389	pfam10099, RskA, Anti-sigma-K factor rskA. This domain, formerly known as DUF2337, is the anti-sigma-K factor, RskA. In Mycobacterium tuberculosis the protein positively regulates expression of the antigenic proteins MPB70 and MPB83.	1.30243e-19
NZ_AP018255.1\|WP_096687730.1\|3675339_3676311_+\|AAA-family-ATPase	gnl\|CDD\|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	1.17798e-53
NZ_AP018255.1\|WP_096687733.1\|3679698_3680040_-\|thioredoxin-fold-domain-containing-protein	gnl\|CDD\|239247	cd02949, TRX_NTR, TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.	3.22517e-25
NZ_AP018255.1\|WP_096687732.1\|3678030_3679137_-\|hypothetical-protein	gnl\|CDD\|214671	smart00457, MACPF, membrane-attack complex / perforin.	5.40141e-20
NZ_AP018255.1\|WP_096687728.1\|3671513_3671867_-\|HicB-family-protein	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.00255883

>NZ_AP018255.1|WP_096687730.1|3675339_3676311_+|AAA-family-ATPase
MLTEVMEHFRLIREFPKAGYYETEHQKQMFKDIKVAIHSGKLVAITGIIGCGKTTTLRRLFEVLEKEGKILVSKSLSVDKDRATLPTLIAALFYDLSTDKEIKIPSLGEKRERELRDLIRKGKKPVALFVDEAHDLHYSTLTGLKRLIEVVEDAGGTLSVVLAGHPKLKNDLRRPTMEEIGYRATVFSLEGIVGSQREYIEWLVSKCTTEDTQISDILSAEAIELLAMRLRTPLQIEQHLTLAFEAAYLFGEKPVTTAIIESVLSKQIDDLEPTLTRHGYDVKGLAEQFNAKPAEIKLLFRGQLDPARSRELQEQMLAQGLPL
>NZ_AP018255.1|WP_096687729.1|3673724_3675350_+|DDE-type-integrase/transposase/recombinase
MNLRHRLDGLPSRCQERRILIEETAALYGVSTDTLYRALRNSSRPKSINRSDSGTPRKLSMTDMERYCEVIAAMKIRTSNKKGRHVSTVRAIELLEEFGMETPAGFIQPPKGTLTRSTVNYYLKTWGYDTVSMTRQPPAVRFQATHSNECWHFDLSPSDLKHVKQPSWVEPGRGNPLLMLYSIVDDRSGVCYQEYHCVYGEDVEAALRFLFNAMTAKTTDGFPFHGIPEMIYTDNGPISKSHVFQNVMDCLRINLVTHMPAGKDGRRVTARSKGKVERPFRTVKEAHETLYHFHEPESDVEANLWLRQYLLHYNDKPHRIEPHSRTEDWLRNVPKSGLRSMCSWERFCTYAREPQRRKVGSDARVSVEGVAYEVEPDLAGETVVLWWGLFDNELYVQKDDLRYGPFYPVDGPIPLHRYRKFKKTKTEERADKIADLAKKLGLPRAALDKNADLQFLVDKYKELAPTVTPFNDPDPFQEFTYPTVLFAKRAISDYLAKPLAKLSTEQLAFIDALLTETLNKKVIIERVRQYFHLNRGGQNAN
>NZ_AP018255.1|WP_096687728.1|3671513_3671867_-|HicB-family-protein
MTASFVNNQNQDLSKVNYPILIEEKEGAYTATVWGLPECKSEAQTREEAIQNLYEIVNTRLQNVEIVMAEIEASHKQNPWIEFAGMYEDNPLFNEVISNIAAYRREIDNQIDSEGDV
>NZ_AP018255.1|WP_096687727.1|3671097_3671517_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MMALWILDTDTLTLFQNRNPKILQRLNQINFQQVAVTTVTVEEQMRGWLDAIRQSSEPQRLVWGYLGLRRGIEFFNTIRILDFDQNASESYQKLKQAKTRVGTQDLRIAAIAISNSATLVTRNSRDFSRIPNVKFEDWA
>NZ_AP018255.1|WP_096687726.1|3669487_3671002_+|hypothetical-protein
MTQNQPFEVISDSPSSGEVNLDQYLSRTYILYKHAEASRKLQRGTINVLEVSFHLDEQKRVLKRKAYKQLLTELDLEGEDKSYLKVGAAFSGFDPASLAFVEPNTIFLLAKNSKKYQPVIEQLKNEANITQKRVRELIYDYRKSQKEETSDDNNSDTTKNVSVWRRGISSKRYCQIGAIHEDDEFTGVTIQRIVEEKHVLPQTVVRNAMSLVEAYESAQLVWVNSSTELNYDDAKSFFDVREINTLSSAEAPSCSSPCIDSESQLPKNEELNETRELDAQQESRETSSSCDSTHTENLRPDSIESGGNSNLTLSEEHKSSEGLSTSATPCELTEVVSKLEVSDDVDNSAISESKVDNSQMSESVVVPQSEADSELEKEAAIIAEYLSEVETWEEVASVMQNCPSDLKSSSWQLLSEEQKARIHELKHEFEISGTFVAAYEETSDISSNQESEKSLQVGDKVMWDNCYPYLQSWQPFIICRIEGDKAKLDYYANLVPLAELSLAE
>NZ_AP018255.1|WP_096687725.1|3668790_3669030_-|helix-turn-helix-transcriptional-regulator
MAEKDPQLSQKQLAEEVGLDITTINRLFTNNFSRVDIATVEALCNYFDKEVGELFEMRKPEDIPQRKARKRPKIDSASL
>NZ_AP018255.1|WP_096687724.1|3667187_3668759_+|ATP-binding-protein
MQFKDLPMLFDQGQNIVVVEAPVTERIKILEFMYQIASSRRQYLYFWNQGYMQLQQVNQSIQLIRQTADVIGNSGLAWLLENPEATGIFVFEGEISPDAITGAIGQQTLFILSNLFYELAKKNRQQFVVCLEAYIELPVSVAPLIPVLNYERANPEQVQQIVHTIFGNQFGLKADNFYRNCLGLPCGELEIALLRLSRQISSYEELADAVLAYKKNKLKGQGVEFINEPDVLHAGGLDLLEEILERAAVLLKPEAKNYNLKFPKGMILWGPPGTGKSLSAKLAAKKMGVPLVAADWSGLRGSTAFESRKNLREFLQFCDANGTHGLVLYFDDFDKGFAGFDSDNDGGISRQLAGKLLTWMQERTSQVLVMATVNRLEFLPPELVRRFDDIIFVDLPHAGARYEIFKLHLAKYFPELDFSEKDWWRLLNETKLLTPAEIALVVRKTAESAFYRNCKLFLNEELASKPLQVTVRDFIEQRHRFTPSMIREEDKILEIRNKAFYARPAASPDTSKWAKAPTVLFGS
>NZ_AP018255.1|WP_096687723.1|3665216_3666283_-|ISKra4-family-transposase
MNQDKLDRLNACLKEVAELLYEEADKTILTDLEGIEKTVRSQVLKYVSPEIAPFFIEETTGIKIGKKRKIKSVVGELQLKAKQLDKLGLKPFSRLSPLLQKLCLRVSALCTYQNAETEIEAQTGIKVGHSTQQKLVLEHEFQLPQAKQSISEVSIDGGKIRLRGEPKKGSYWKDYKAIRLQGIFYGAFFNDNESLIDYINSQPLINPLVCLGDGHDGVWNLAQELGTAEFQQLQILDWYHLKENLYKVGGSLKRLKAAETLLWQGNVDETQALFTSLRSKQAKNFIAYLDKHKSRIVNYSYYQNEGIYSIGSGAVESAIKQIGRRIKISGAQWNIGSVNQILGVRCAYLNGLFTV
>NZ_AP018255.1|WP_096687722.1|3664042_3664693_-|hypothetical-protein
MNSINQGQLVEIEYEGQQLKAIVIDPNGLGNGQATIGLGFRMGKEYLGISEQAMSKRVTTIDGIKCLKLPSGKFLRVTTILASDGNEYKVIEFGDWSELAQDFLKEAVQGKSKLSPSVQTKMIEFLAWFAVKGLYATSYAKLKGAYTESDDNALTQSLTKANEQLIADNEILKLQYDRKCSEVDQLLYRLDAIEETNSNSGTDWRHWELEQNSINF
>NZ_AP018255.1|WP_096687721.1|3661665_3662694_+|cytochrome-c-oxidase-subunit-II
MQQVPVSLLTLVAGVLVTLVSIWVGQHSAVLLPVQASEQAPLVDRFFQILVGIGTALFLVVQGAIVIFMFIYRRREDDDRDGPLIEGNFPLEIFWTAIPSIIVIGLGIYSVDVYTQMGGLSVGHHSMAEHAAAPVKGAALAATLNASDIEALTEEIQYDAPSEAPVEAPELVPIEEPITLPVETPIKTPVKKLVNLPQPGIGIGANPKVLGKTADLVVNVTGMQFAWIFNYPETDITSGELHVPVGADVQVNLAASDVIHSLWIPQFRLKQDAIPGQATGLRFKATKPGTYPIVCAELCGGYHGSMRSQVIVHTPEEYQEWLESNRVASAQNQQIVAALQSH
>NZ_AP018255.1|WP_096687731.1|3676507_3677689_-|hypothetical-protein
MESTKVIISVENLAPQNGTLVTPLWFGFHDGNFDIYDRGRPVSPGLESVAEDGATNLISQEFDLSGFGSVQGTIPGLAVTPGPIDSGEIAQTTITLNGSDLNSRYFSYAAMLIPSNDFFIANGNERQNRIFDDLGNFLGVDFTLLGSQVLDAGSEVNDEIPANTAFFGQQNPNTGASENGVVQIAKGFIPGGAILSDPRFSNADFTNPGYHVVRIRVLADASGGQNTFGVEPGSTVNIANFGGVGREANPTPEAIAEADILKFAGDGLTAENLILLQNGKDLEISFDGVANTKVVLADFAIENFDNLNNGIGNVLFNGNTSIQDSFDVINVDANPDRVARPNTVTFLNGFDNQVRGFNNSDDVINGQRGNDTLWGLSGNDILRGGLGDDTLYV
>NZ_AP018255.1|WP_096687732.1|3678030_3679137_-|hypothetical-protein
MLLSSYDFQQMFSQNVSLGVGVPQVFAFSTSTTYRRIEQETRTRTHLYSYTQAEFIDHELRLRLHQSASLPIGEELRQAVKALPNIANRQVYQQFIDKFGTHFSTNVAFGGRAYQFIRMSREDYTRMVLEGINISLEAEGTFKNVTGQIASGTETEKSRRFRSVVERGQESVQWSGGTPSRNLDTWLNTIRQDPVPVKLQLSPLYELFTKERFPEEEQISQKQKLMRESVEQYIQTQGQKPRPTAPSDREVVAEVVTVSLAAANGQKSRVSQNFFLNYPNIRVRWNIEGVSESAKRDIRFTVMEDKSNASDQSRLNDVKNGDTSDASLAIFNPNQLYIGRLNYRDYRHKDVFTQIGVHQFRIKITVVL
>NZ_AP018255.1|WP_096687733.1|3679698_3680040_-|thioredoxin-fold-domain-containing-protein
MQETFSIDQTFFTGQAALEWLIQESDQLIIVKFVAPHCPSCETLKPVLHQIAVDNTGKLHLVELDMSEEPELAINFGVRSAPTVLLLKQQQTIAQIAGLKPKKQYAEMIQSVL
>NZ_AP018255.1|WP_096687734.1|3680103_3680955_-|cytochrome-c-biogenesis-protein-CcdA
MKLIPQSSTEQTTSRRFKISKKWLFYGGLGLLSLILILILGPVISHSIERVISIIENRYQQWFDQQDTANPFVLLPLAFAGGAIASVSPCILALLPVNLSYIGTLNIKSRWDAFTKAGFFVLGAVTILSLFGLVSSFAGTVMVEYRGYINIVVGLVMAVMGLWLMGLVKLPLPQMNVKLPQAGPYGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTLLIFLASLFTGLAKQSKQLLKHSEGIIRFGSLALILTGGYYLFTGTQWFLGS
>NZ_AP018255.1|WP_096687735.1|3680985_3681543_-|thioredoxin-family-protein
MYKHTKFLLSLLCLSSLVLTVSCGATKSDNISQNQASSAKEVAQADPCAGKNPCAAKDKNPCAGKLTSVGGPLAKELQGKPVLVDVFATWCAGCKNIAPTLSQLKQEYSGKVNFVVLDVTDKAKVKETEVMAEKLGLSKFLQANKSQTSTVAIIDPATGNILTMFKNNPNKADYSKILDTAKAQN
>NZ_AP018255.1|WP_096687736.1|3682013_3683933_+|hypothetical-protein
MQTRTIINGQTSKTNVELLDDETLQVLGNLNTQNGQPAVIAQGDNTKVRINQGGAIQSDNTAIQVNGSETLVFNNGLIEGSFNGVNLANDDVASASIFNNGTIRSASRAVNLGGVFGTLTNTGLITTTANPRNGTVYSDESLQNFEIKNTSSGVIDVGVGNNGDAISLELGASLSGSVFNEGVVQGRGSSIGNNQAAAVRLFRGNNATTERVIFDGNIQNYGLFAAETGAAVVVEENVKVLGTIYNSGSIKSENVLNGNGITFENGSEIIGEIVNKGLINGGRDGINFENGGLSKGTIRNFGEIISSSRAVNIGGDHVTLINEGLITTTANPRNGTVYTDVTNNSFTIENRGLIDVGQGLSGDAISVELGANVTGSIVNQGKIQGRGVALGQNQSAAVRYYHGNDPTSETSVFTGNLANYGALTTENGATVIIDDNVEFRGGIQNYGLIEGGKVDYISTNLDQILGRVGVSQLAIDARETEGNISILNNGDIRGGVLLGNGANSYNARRSGSDNWVRGGDGVDVFLGGSGHDIFFGGLGDDRLSGGAGDDILIGGAGNNILSGGSGRDRFVLEGGGTDQILDFALGEDTVVLGSTIRFNQLEITQVGGDTQLRFGGDLLASLVGVQSNQLTTASFSSLG
>NZ_AP018255.1|WP_096687737.1|3684846_3685449_+|sigma-70-family-RNA-polymerase-sigma-factor
MEPKLPESNSLLASDVTDEALFVALKNGDAAALSILFQRHGRLVYGLALKILGNSQEAEDLTQEIFLTLWRKASTNPDCRFFVRYLVTITRTRAIDKIRARSRQLKLVEKMQTMSNDVTPEPTPVEQASFAERAQRISHALQQLSEKQRQVIELAYNQGLSQSEIAKQLDIPLGTVKTCTRQGLLKLKGILLDVDILIYE
>NZ_AP018255.1|WP_096687738.1|3685441_3686260_+|anti-sigma-factor
MNKSFDSEHIKNLAAGFVVDDLTPEEAEEFRLLLNEHPEMIAEIEDLQEVLRQVLDGFTEVEAPVDLLPKILSQAEAETHQVNVNNIQIKQADNLRRAGISQRWTKIAGSIAALFIVILGVDNYRLRQSLSVAATDNQKLRHDFAQAQEVKSLLQNSQTRLFTFQAVNSTKNSSGSIVINPQKQKAVMVFQNLPAPPPGYVYLLWTVVADQKLPCGQVKPYSWGTASYELPFTNQMYNEFSHPQFSGLIVTLETDANVPRPTGTVVMQSSQI
>NZ_AP018255.1|WP_096687739.1|3686271_3686904_+|cupin
MFTEENDCTECQDWLVTDGGDCVALNLEELALPEKPYRLYRFLTELEDILDTITDDSLRIQAIIPLVRKLLASSYWLQMEFTEPPTDPGWSVQFLYDEYEFPLTVQMVAWLPGHVSPIHNHATWGIVAIVSGQEKNQFWRRSSTPENSSGIKYIGEKILVPGDIIAFTPDAIHSIEALGQEPVITFNLYGVTAYDERFEFDTINHSVKNF
>NZ_AP018255.1|WP_096687740.1|3686882_3688721_-|response-regulator
MKILIVEDDNSLAQAIAAVLTKLHYVVDIASDGQDGWELAVACNYDLILLDVLLPKFDGISICRQLRQEGYQSKILLLTSLDAKSDKVIGLDAGADDYVVKPFDFQELTARIRALGRRGSSSLPPILEWGSLHLDPSSCEVTYVNEVLHLTAKEFSILELFLRNSQRIFNRGAIIDNLWGALKDPPEEDTIKSHIKSLRRKVKAAGGDYDFIETVYGMGYRLKPLPEEQSTDSDSNSELTKVLLAEIAKQQKAFKAKVSERIAHLKQLTHAICEGDLDKHIWQDASQEAHKLAGSLGSFGFARASSIAEKIDNIFQDVAPINQAQSLHLYKLVVDLQHELEQPDIQTSNELPSNKVTQDVLLVISDSEQIAQQLVEAATAIVTVNIATISSITKSGVISANADVVLIDLDSGYGIKDSLKLVTEFSNRTPPVPVLVLTNRNNFDDRVEVARAGGRGFLHKSMSSEQILQHVTKVLQTVHMPSAKVMIVNNDSNVLNTIENLLEPRGIKLKTLQDPRQFWDTLTEFLPDVVILGLKMPYIDGTELCQVVRNDPYFCSLPIIFVTDASQVDISMQLFNKGASDCIIESIQESELLTRIFNRFRTNLYYQKFLTL

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Crispr_ID: NZ_AP018255_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_12

3740258-3740861

Unclear

Consensus_repeat	Method
TTGTTAGTACTGTTTTNGGG	CRT

13 spacers

WYL,cas8b5,cas7,cas5,cas3,cas6

The CRISPR arrays of NZ_AP018255_12

>merge|NZ_AP018255|12|3740258-3740861|CRT
TTGTTAGTACTGTTTTGGGGTATCTGTTGGGGCGGGTTTACGTGATTGTTAGTACTGTTTTGGGGTATCTGTTGGGGCGGGTTTACGAGATTGTTAGTACTGTTTTAGGGTATCTGTTAACCCGCCCTTACGAGGTTGTTAGTACTGTTTTGGGGTATCTGTTGGGGCGGGTTTACGAGATTGTTAGTACTGTTTTAGGGTATCTGTTAACCCGCCCTTACGAGATTGTTGGTACTGTTTAGGGTATCTGTTGGGGCGGGTTTACAAGATTGTTAGTACTGTTTTAGGGTATCTGTTAACCCGCCCTTACGAGATTGTTGGTACTGTTTTGGGGTATCTGTTGGGGCGGGTTTACGTGATTGTTAGTACTGTTTTAGGGTATCTGTTAACCCGCCCTTACGAGATTGTTAGTACTGTTTTAGGGTATCTGTTGGGGCGGGTTTACGAGATTGTTAGTACTGTTTTGGGGTATCTGTTAACCCGCCCTTACGAGATTGTTAGTACTGTTTTGGGGTATCTGTTGGGGCGGGTTTACGAGATTGTTAGTACTGTTTTAGGGTATCTGTTAACCCGCCCTTACGAGATTGTTGGTACTGTTTTGGGG

>NZ_AP018255|12|1|3740258-3740861|CRT
TTGTTAGTACTGTTTTGGG	GTATCTGTTGGGGCGGGTTTACGTGA
TTGTTAGTACTGTTTTGGG	GTATCTGTTGGGGCGGGTTTACGAGA
TTGTTAGTACTGTTTTAGG	GTATCTGTTAACCCGCCCTTACGAGG
TTGTTAGTACTGTTTTGGG	GTATCTGTTGGGGCGGGTTTACGAGA
TTGTTAGTACTGTTTTAGG	GTATCTGTTAACCCGCCCTTACGAGA
TTGTTGGTACTGTTTAGGG	TATCTGTTGGGGCGGGTTTACAAGAT
TGTTAGTACTGTTTTAGGG	TATCTGTTAACCCGCCCTTACGAGAT
TGTTGGTACTGTTTTGGGG	TATCTGTTGGGGCGGGTTTACGTGAT
TGTTAGTACTGTTTTAGGG	TATCTGTTAACCCGCCCTTACGAGAT
TGTTAGTACTGTTTTAGGG	TATCTGTTGGGGCGGGTTTACGAGAT
TGTTAGTACTGTTTTGGGG	TATCTGTTAACCCGCCCTTACGAGAT
TGTTAGTACTGTTTTGGGG	TATCTGTTGGGGCGGGTTTACGAGAT
TGTTAGTACTGTTTTAGGG	TATCTGTTAACCCGCCCTTACGAGAT
TGTTGGTACTGTTTTGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_AP018255.1\|WP_096687784.1\|3735562_3736501_-\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|235293
NZ_AP018255.1\|WP_096687789.1\|3739316_3739793_-\|NifX-associated-nitrogen-fixation-protein	unknown	unknown	gnl\|CDD\|367430
NZ_AP018255.1\|WP_096687797.1\|3752956_3753850_+\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687798.1\|3753884_3754712_+\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018255.1\|WP_096687786.1\|3737926_3738730_-\|HesA/MoeB/ThiF-family-protein	unknown	unknown	gnl\|CDD\|238386
NZ_AP018255.1\|WP_096687792.1\|3740902_3742222_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	unknown	unknown	gnl\|CDD\|237722
NZ_AP018255.1\|WP_019490231.1\|3737052_3737352_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|177056
NZ_AP018255.1\|WP_096687793.1\|3742397_3743831_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE	unknown	unknown	gnl\|CDD\|172952
NZ_AP018255.1\|WP_096687787.1\|3738740_3739058_-\|nitrogenase-stabilizing/protective-protein-NifW	unknown	unknown	gnl\|CDD\|184508
NZ_AP018255.1\|WP_096687794.1\|3744500_3746051_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_AP018255.1\|WP_096687788.1\|3739054_3739270_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377451
NZ_AP018255.1\|WP_096687796.1\|3750473_3752954_+\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP018255.1\|WP_096694145.1\|3732569_3733172_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341393
NZ_AP018255.1\|WP_096687783.1\|3734252_3735512_+\|sedoheptulose-7-phosphate-cyclase	unknown	unknown	gnl\|CDD\|341478
NZ_AP018255.1\|WP_096687785.1\|3737470_3737845_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|272875
NZ_AP018255.1\|WP_096687790.1\|3739789_3740203_-\|nitrogen-fixation-protein-NifX	unknown	unknown	gnl\|CDD\|131711

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.39254e-25
NZ_AP018255.1\|WP_096687784.1\|3735562_3736501_-\|protoheme-IX-farnesyltransferase	gnl\|CDD\|235293	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional.	2.20467e-127
NZ_AP018255.1\|WP_096687789.1\|3739316_3739793_-\|NifX-associated-nitrogen-fixation-protein	gnl\|CDD\|367430	pfam03270, DUF269, Protein of unknown function, DUF269. Members of this family may be involved in nitrogen fixation, since they are found within nitrogen fixation operons.	1.92519e-70
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.26115e-09
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.19805e-50
NZ_AP018255.1\|WP_096687786.1\|3737926_3738730_-\|HesA/MoeB/ThiF-family-protein	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	1.06076e-92
NZ_AP018255.1\|WP_096687792.1\|3740902_3742222_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	gnl\|CDD\|237722	PRK14476, PRK14476, nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional.	0
NZ_AP018255.1\|WP_019490231.1\|3737052_3737352_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|177056	CHL00134, petF, ferredoxin; Validated.	7.95399e-45
NZ_AP018255.1\|WP_096687793.1\|3742397_3743831_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE	gnl\|CDD\|172952	PRK14477, PRK14477, bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional.	0
NZ_AP018255.1\|WP_096687787.1\|3738740_3739058_-\|nitrogenase-stabilizing/protective-protein-NifW	gnl\|CDD\|184508	PRK14102, nifW, nitrogenase-stabilizing/protective protein NifW.	5.92597e-50
NZ_AP018255.1\|WP_096687794.1\|3744500_3746051_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	4.00418e-20
NZ_AP018255.1\|WP_096687788.1\|3739054_3739270_-\|hypothetical-protein	gnl\|CDD\|377451	pfam05082, Rop-like, Rop-like. This family contains several uncharacterized bacterial proteins. These proteins are found in nitrogen fixation operons so are likely to play some role in this process. They consist of two alpha helices which are joined by a four residue linker. The helices form an antiparallel bundle and cross towards their termini. They are likely to form a rod-like dimer. They have structural similarity to the regulatory protein Rop, pfam01815.	3.7958e-26
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.41718e-35
NZ_AP018255.1\|WP_096694145.1\|3732569_3733172_-\|CBS-domain-containing-protein	gnl\|CDD\|341393	cd04630, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.00531e-54
NZ_AP018255.1\|WP_096687783.1\|3734252_3735512_+\|sedoheptulose-7-phosphate-cyclase	gnl\|CDD\|341478	cd08199, EEVS, 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthase catalyzes the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, validamycin and acarbose, are used in agricultural and biomedical applications. Validamycin A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits strong trehalase inhibitory activity.	5.56932e-178
NZ_AP018255.1\|WP_096687785.1\|3737470_3737845_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.14011e-45
NZ_AP018255.1\|WP_096687790.1\|3739789_3740203_-\|nitrogen-fixation-protein-NifX	gnl\|CDD\|131711	TIGR02663, Protein_NifX, nitrogen fixation protein NifX. Members of this family are NifX proteins encoded within operons for nitrogen fixation in a number of bacteria. NifX, NafY, and the C-terminal region of NifB all belong to the pfam02579 and are involved in MoFe cofactor biosynthesis. NifX is a nitrogenase accessory protein with a role in expression of the MoFe cofactor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation].	3.34568e-57

>NZ_AP018255.1|WP_096687790.1|3739789_3740203_-|nitrogen-fixation-protein-NifX
MKIAFTTSDRVHINAHFGWAKEIDVYEISDNGYEFIETLKFEGDLKQDGNEDKVTPKLEALYDCTIVYVSAIGGTAAAKLIKKGVTPVKAKSDDDKIVDVLDKLVITLKGSPPPWLRKALQQKPSSFEDDLEEETVV
>NZ_AP018255.1|WP_096687789.1|3739316_3739793_-|NifX-associated-nitrogen-fixation-protein
MSDTNSVKPDSSFEVKNSAFLQAIAQQIRGQDTYGVYRSWSDELLLKPYIVSKQKKREIPIDGEVDPMTISRINAFYRAAAACIEKETGFLSQVVVDLNHEGFGWILVFAGHLILIRKTMRDAHRFGFDSLDKTAEEGDKLVAKAVDIAKRFAEVGKL
>NZ_AP018255.1|WP_096687788.1|3739054_3739270_-|hypothetical-protein
MTQASVDIEELKTQIRRLNSKAGQMKMDLHDLAEGLPTNYQQLMDVAAETYEIFRKLDEMKQQVKTLEQGK
>NZ_AP018255.1|WP_096687787.1|3738740_3739058_-|nitrogenase-stabilizing/protective-protein-NifW
MSKDFDTFNQIVDAEEYFKFFELPYDAKIVNVNRLHILKKFSLYIKEIDEQNPGLSFGEKLDLYSAALNKAYEVFLDSTPQEQKLFKVFNQKPKNVVTLTEITSD
>NZ_AP018255.1|WP_096687786.1|3737926_3738730_-|HesA/MoeB/ThiF-family-protein
MIDLTPTELERYRRQMMLPNFGEMAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGKLILVRGGDLRLDDMNRQVLMTDDWVNKPRVFKAKETLEALNPDVQVEAVFDYITKENVDALVQSADMALDCAHNFAERDLLNEACVRWRKPMVEAAMDGMEAYLTTIIPGVTPCLSCLFPEKPVWDKRAFAVLGAVSGTLACLTALEAVKLITGFSQPLLSQLLTIDLHRMEFAKRRSYRDRECPVCGNNAPWRYSSSKQVETTSNCKSA
>NZ_AP018255.1|WP_096687785.1|3737470_3737845_-|iron-sulfur-cluster-assembly-accessory-protein
MAVTLTEKAESRLRAFLLGSTPDTGAPTTKGIRVLAKNGGCNGYEYGMEVTSSPKPDDVVLLQGNVPIYLDPKSAPLLEGMVIDFVEGVIESGFKFTNPNATNTCSCGKSFSAGDCTPKGTPCT
>NZ_AP018255.1|WP_019490231.1|3737052_3737352_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MATYQVRLINKKEELDTVIEVDEDTTILDGAEEAGIELPFSCHSGSCSSCVGKIVEGEVDQSDQIFLDDEQMSKGFALLCVTYPRSNCTIKTHQEPYLV
>NZ_AP018255.1|WP_096687784.1|3735562_3736501_-|protoheme-IX-farnesyltransferase
MVRISIARGHGNILPVIADYYELTQPRIIPLLLVVTAASIWIASNGKVNPMLLLWTLTGSTLASASAQTLNCIYDRDIDYLMERTRHRPIPSGKVQERNALIFGIILAAASFYLLAAFVNMLSALLAMLGIVFYVVIYTHFLKRHTPLNIVIGGAAGGIPALVGWAAVTGTVSSTAWWIFLILFLWTPPHFWALALTLRDDYAKVGIPMLPAVSGNIETGRQIFTYTVLLILSTFLMYDPLEMTGAFYICAAFILGAIFLQKAWAVLENPNNQKRAHNLFTYSIYYMILLCLSMIIDSLAITHQIINLISNG
>NZ_AP018255.1|WP_096687783.1|3734252_3735512_+|sedoheptulose-7-phosphate-cyclase
MSNVQATVAASENTFHVEGYEKIEFTFNILDGVFNIANHELADKYKSFGRCLAVVDHNVNQLHGSRIKEYFQHHNIDLSIFPISIEETTKNIESFEKITDAFCDFGLVRKEPVLVIGGGLVQDVAGFACASYRRSSNYIRIPTTLIALIDAGIAIKVAVNHGKLKNRLGAYHAPKQIFLDFSFLSTLPTAQVRNGMAELVKIAVVSNLEVFELLEKYGEDLLLTHFGYVNGSEELQKVARKVNYESIKTMLELEAPNLHEIMLDRIIAYGHTWSPTLELAPPVPLLHGHAVNIDMALSATIAERRGYITTNERDRILGLMSRIGLALDHPLLDVELLWRATQSITLTRDGLLRAAMPKPIGSCHFMNDLGRDEIEEALAEHKRLCADYPRAGAGVDQYIDCADSELTTKSTLVGSGSLS
>NZ_AP018255.1|WP_096694145.1|3732569_3733172_-|CBS-domain-containing-protein
MTQDVATIRGSVSVAEAVQLMRFKGLRALIVEPRHDGDAYGIVTETDIAYKVVAYGKDPQRTHIYDIMTKPCVIVNPDLDIEYVARLFANTGIRRAPVIQGELLGIISVTDILTKGNFVEKPKLQFLQKELHKAVSNARSISANYGADSRRAIEAWDLVDELECEAGYYGAPKPEKTAREIFADQTETTVATSSTVTQPV
>NZ_AP018255.1|WP_096687792.1|3740902_3742222_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN
MAIVSNSNKPVVVNPLKQSQTLGAAMAFLGLKGMVPLLHGSQGCTAFAKVIMVRHFREAIPLATTAMTEVTTILGGEENITQAILTLMQKSQPEIIGLCTTALTETRGDDMQGILKDFRKRHPELNDLPIVLVSSPDFKGALQDGFAAAVEAIVRELPQPGKTIPQQVNILASSAFTPGDIQQVKDIVTEFGLVPIVVPDLSASMDGHLADSWSPITVGGTTVEELRKIGSSAFTLALGESVRTAASILEERFQIPYEVFTELTGLHRVDEFMQALSDLSGLSVPDKFRWQRRQLQDAMLDTHFYFGRKRISLALEPDLLWSTVLFLQSMGAEIQAAVTTTRSPLLENLPIDKVVIGDYEDFEKLAVGSDLLIGNSHAGNIARRLGIPLYRQGIPIYDRLGNGQVTKIGYKGTMDILFDIGNILLETEERKARELSYEM
>NZ_AP018255.1|WP_096687793.1|3742397_3743831_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE
MKINQAKINELLSEPGCEHNKKIGEKKKACSQQAQPGAAQGGCAFDGAMIALVPITDAAHLVHGPIACAGNSWGSRGSLSSGPTLYKMGFTTDLSENDVIFGAEKKLYKAILDIHSRYNPAAIFVYSTCVTALIGEDMDAVCQAAAKKINIPIIPVNAAGFVGSKNLGNRIGGEALLEYVVGTAEPEYTTPYDINIIGEYNIAGEMWNILPLLKKLGVRVLSKITGDARYQEICYAHRAKLNVMICSKALINMARKMEERYGIPYIEESFYGVDDMNRCLRNIAAKLGDPELQERAEQLIAEETARLNVELAPYRARLKGRRVVIYTGGVKSWSIISAAQDLGMDVVATSTKKSTEEDKARIKQLLGTDGITLEKGNPQEILRVIKDTNAEMLIAGGRNQYTALKARIPFLDINQERHHTYAGYSGMVEMARELDEALHSPVWEQIRRPAPWDMENEIFSDSSLEFDLFDLAEEVLV
>NZ_AP018255.1|WP_096687794.1|3744500_3746051_+|recombinase-family-protein
MDVWAYARVSTDEQALDEGALIKQMRRLRTAGATKIYYDVESRTSDKRKGLLQLIEDINASVPGKVSKLLFIRIDRLTSSSMTFYRLMDALKKKGIQPTAIDEPFDISSIGGELTIDVRLAASKYEVKMLGMRVKKERDTRKANKKPHWNTPLGYAIENDKYIIDNSPCVCIIESKQELTRAQLMRLVFDTFLTVGTVSQTVRQLHDIFGIQANATPKDSNSKINILSEEDEIVFENINKSRSSGLSLRYPHTGLKWSVSGLRSILVNPIYAGGTPYDTIVRPKGHRKPFDEWEIAWETHPDETIITREEHEQIKAMIRGNRNNRWANEQKYTNPFANLVKCAHCGAAYSRQCKKLVKKKNFVRHHYQCSFYRTGACQNGRMISSDELEKQVINHIVSEAEKLAHLIEQEQTVTEEPPEIKTLRASLNTLEALPSNPAIEKAKEDIRMQIANAIATTSNNSKQYLIAKERVTRAFANPRYWEGLETEDKRTLLQACVKKIIVDGALVTAVELLHLH
>NZ_AP018255.1|WP_096694146.1|3746310_3746547_+|DUF433-domain-containing-protein
MSHNQNDLLSRISIDPNICFGTPCIRGHRIWVSMILDYLAGGETIEAILEEYPGIEREDILACIAYGAERSDSFTFSS
>NZ_AP018255.1|WP_096687795.1|3749401_3750262_-|WYL-domain-containing-protein
MPRKKDTITLSIPPGTKEKLEEIARILDIKWGKEPSISGLIVAIAEKTLEVGKPFTLESNQVNALQQAIKALNDAGRIGEAQTVLALLLERGNLEAPLRQSLMKQISYSTQGWRIQIEDWMKKQQPFYILYHNSQGQELEYTVRHAEPRSFDSRFYLLVWCEETQDVENHIPELPELWHNRCLTYDRIRSAVPINGEWRGSLDYIKVYLHFRGWMKKSYRPKEDDIEDQDVGEVRQIVRNVTNELWLIREVLRYEENCVIVAPESLRNRFKQKLLSVCDLYDLERF
>NZ_AP018255.1|WP_096687796.1|3750473_3752954_+|hypothetical-protein
MNTAVKLKILTATLAAKVPLPNFQALISSLASKAETFALASQFDSPKLKRELSLAKPDHSTEELLQIELNGDKVIYQGQEIGKTQILYKSPLPGELQARLATESAIDRFLEYLQKLHQIVVLDESDRHVRVFIPNKQVQIPDFAKLWEKFLEEVAFCAYGDSKHQLPGLVQTFIQMLNSVTLSGRGFSTLDIPVLTKDQSRVQAGWYFAVVRDVRERQNKRQIQIEGLEKELAESDLDDKARKLKTKQLQEKQVMQIKEAEKYTDYFRKSFGKSLEEQNAARQELGQIETQLAQPKLAKSEQKKLQKQQDKLMGKVIFTPESIQEKLRLLNESNGSPLDFVKLDEKKNPEKFREIRKISTNFTETATNQINSTRGDIFTQCVFEMYRLLENKPNDPLPKPLLTEDPILGEMRAPGDDSKEFCYSCGVKLDPKTARWQVLRFMFERPSQRRQSSSSEGRPYICSSCSALAFASPLKVTDESVVLMLEPADSSIDFEEKKLKIKDYLRMLTNKEMHLSAGRYLIFNSNEDRTSSGDLASHKLGQLQYAMVKTAKNFSVEVLADLNFSLITQGSEKISLSSKYLLFIKGLMDSYGQQIVRAGKEVNMHLGDAVRYIQQDLPYLADYTLTKVANLSNQYQLEQIREMYWQAVQNDLRTKGVDMSSDKQPAIKARLYIDIAALTGITYAFAQSLEITARQANKGEDYVEREVSKLIEKVDDAVAFCYYATLGDVNKRSVQARLYSNPENYFIYQQAKNLLDRLELSDRELEDEKKKYLTLYADDILNIYQYFKDNGYSQEKEWKDLTYQLKLSLYTRFPELVRKQKSTSEK
>NZ_AP018255.1|WP_096687797.1|3752956_3753850_+|hypothetical-protein
MATGLSKTDANNPRLHFDIYAILEGSQELYFGHEVQVNVNLVETVKLKIKDELSSEPRSMEKCYLSPTKRRGVERRCLIWAPVATGELLGDKQDCGIPKTCAKQECPICSVYGGLEPGQKTLIGRVTHGGGVAVQEMFAVEKQRAMHPSRLASPKDKKDETPIPFKREYNQPGILYPVSNHALSITDKEFAAVAYAFLDALPRIGAGNPKGIAIAESKNQPLLVMDRYLVPKRKRPVISPAITNPEEAIATFERLAQKPENTSSYIQENHFERWIGDAALEKLQEYSSNFVDAILQS
>NZ_AP018255.1|WP_096687798.1|3753884_3754712_+|hypothetical-protein
MYCLQINLQPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRLGMMYAGLDIPNTRVNNDNPPFYALPQRYCALGAYSTKGKLSTVHRTYRKGMREFNHDVFSRIYQDGDKANFQLHTWEYFIAEELVSYVVTDSAKGLEHFQELVGYGCKLGKEGFAIVSQVSEIIELHQETLTKYPSTIVPMETLLQSNQFISGCDIYNLYRYQWAQNNTTESEQEGFLDNQETKVEGFIPFISAYFTDNSGNPPTLDYLTDGNDINIPISLINLLKGEAYV
>NZ_AP018255.1|WP_096687799.1|3754704_3757404_+|CRISPR-associated-helicase-Cas3'
MSKVKRKHSFNFGRVFFPGDKNKIPDKIIFQPLGNHVGNVIRILKKWNRDNFPSETSFERVLEAAKIHDVGKPPRFEIQSQSSKDGTFDKYIYSFRGHRYLAKSDKDAWAEALAIGHHDFSVEDICTQTYQLKKEYKYADILTKQPLAYAFELYILEMCDQIEAELACRVFEDGNQADSRTFMDFTISPDESSKEVYFIDPWPFGEQKSIELSFESWEMRPVDVDTDGELQKCIKNNQEQALGKTLDRIVKNWWQSEQGQPKKSDTKTVSLKPYPSVIESKIWTAEEFYKQLGGFTPNPMQKEMFESIYNSNPNIDKHPANLLKSPTGSGKLESVLFPTLASNWRLILPLPARSLLEDQKERIQKYLKKFSTVYKDREVSLVIDTGSQMYRYVYKNGVEAKQRTSNPRRHLYKGDVILTTIDKFLYRYFAFGGKQKSFTFPLRINRENTIICFDEAHSYDEISFTNFHSLVRSLYEAGRSIVLMTATMPEEYLKRLDYLEAIDYIHNSEKLNQLKQFQAQTLKQKYPNQKAFKWISDVERDDENPNIFQNQFAQFIIREWKNKPNRRIIIVVERVTDAAAIYEQLNNSLDCTTDESGRLLFLYHGRIADQLRPDIYKQIQERDSKDQPYILITTRAIEVGCDLNAEVLISEICPPENLIQRAGRCNRKGNIPDAKVVVIGKSIAKFANSLDESAWQKYQTLLQSLQEFDTQKITKCISVSEQVDDYRVVELFSMLHDYVYGADLTCKHAHEKGLIITRSWTPSATIIHKDGSEKPHTITVPIDRLITNKDRGNDFGNICVLEHYYNVETTNWDKRDLSWGCAYSKDIVIEIHKNHEGAACFDGKPEYQYNPNLGFVNLPGVFIKLKGKNNNFEEKLLYKDKNNKSVIITYTKALKDDSD
>NZ_AP018255.1|WP_096687800.1|3757460_3758303_+|CRISPR-associated-endoribonuclease-Cas6
MPHSLVLNLIPQSTIYPQFLTGRHYHALFLNLISSVDRSLGDSLHESNADKAFTLSPLQVKLFDGERRRDKGKSYVLQYQYEQPIPPGTPCWWRISLLDDTLFSKLTQLWLNINPEQPWHLGSADLFITNIQGTPQSIQPWANACSYSQLYERASNIDKTIDFVFATPTAFRQGSFDTALPSRDSVFKSLLQRWNKYSEIEFNSEFIESIFPSFFNIKTEIARDSRSKFIGCIGEISYRIMGEIEAEAIKQINTLADFALYAGVGRKTPMGMGMVRRIKR

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Crispr_ID: NZ_AP018255_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_13

3742230-3742315

Unclear

Consensus_repeat	Method
ATTAGGAGTGATGAGTGCTGAGT	CRISPRCasFinder

1 spacers

WYL,cas8b5,cas7,cas5,cas3,cas6,cas4

The CRISPR arrays of NZ_AP018255_13

>merge|NZ_AP018255|13|3742230-3742315|CRISPRCasFinder
ATTAGGAGTGATGAGTGCTGAGTGCTGAGTGAGGAGTTGTAGAGACGTGACATGTCACGTCTATTAGTGAGTTAGGAGTGATGAGT

>NZ_AP018255|13|12|3742230-3742315|CRISPRCasFinder
ATTAGGAGTGATGAGTGCTGAGT	GCTGAGTGAGGAGTTGTAGAGACGTGACATGTCACGTCTA
TTAGTGAGTTAGGAGTGATGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_AP018255.1\|WP_096687784.1\|3735562_3736501_-\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|235293
NZ_AP018255.1\|WP_096687789.1\|3739316_3739793_-\|NifX-associated-nitrogen-fixation-protein	unknown	unknown	gnl\|CDD\|367430
NZ_AP018255.1\|WP_096687797.1\|3752956_3753850_+\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687801.1\|3758351_3758936_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP018255.1\|WP_096687798.1\|3753884_3754712_+\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018255.1\|WP_096687786.1\|3737926_3738730_-\|HesA/MoeB/ThiF-family-protein	unknown	unknown	gnl\|CDD\|238386
NZ_AP018255.1\|WP_096687792.1\|3740902_3742222_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	unknown	unknown	gnl\|CDD\|237722
NZ_AP018255.1\|WP_019490231.1\|3737052_3737352_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|177056
NZ_AP018255.1\|WP_096687793.1\|3742397_3743831_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE	unknown	unknown	gnl\|CDD\|172952
NZ_AP018255.1\|WP_096687790.1\|3739789_3740203_-\|nitrogen-fixation-protein-NifX	unknown	unknown	gnl\|CDD\|131711
NZ_AP018255.1\|WP_096687794.1\|3744500_3746051_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_AP018255.1\|WP_096687788.1\|3739054_3739270_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377451
NZ_AP018255.1\|WP_096687791.1\|3740202_3740499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687796.1\|3750473_3752954_+\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP018255.1\|WP_096687785.1\|3737470_3737845_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|272875
NZ_AP018255.1\|WP_096687787.1\|3738740_3739058_-\|nitrogenase-stabilizing/protective-protein-NifW	unknown	unknown	gnl\|CDD\|184508

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.39254e-25
NZ_AP018255.1\|WP_096687784.1\|3735562_3736501_-\|protoheme-IX-farnesyltransferase	gnl\|CDD\|235293	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional.	2.20467e-127
NZ_AP018255.1\|WP_096687789.1\|3739316_3739793_-\|NifX-associated-nitrogen-fixation-protein	gnl\|CDD\|367430	pfam03270, DUF269, Protein of unknown function, DUF269. Members of this family may be involved in nitrogen fixation, since they are found within nitrogen fixation operons.	1.92519e-70
NZ_AP018255.1\|WP_096687801.1\|3758351_3758936_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.34276e-55
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.26115e-09
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.19805e-50
NZ_AP018255.1\|WP_096687786.1\|3737926_3738730_-\|HesA/MoeB/ThiF-family-protein	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	1.06076e-92
NZ_AP018255.1\|WP_096687792.1\|3740902_3742222_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	gnl\|CDD\|237722	PRK14476, PRK14476, nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional.	0
NZ_AP018255.1\|WP_019490231.1\|3737052_3737352_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|177056	CHL00134, petF, ferredoxin; Validated.	7.95399e-45
NZ_AP018255.1\|WP_096687793.1\|3742397_3743831_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE	gnl\|CDD\|172952	PRK14477, PRK14477, bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional.	0
NZ_AP018255.1\|WP_096687787.1\|3738740_3739058_-\|nitrogenase-stabilizing/protective-protein-NifW	gnl\|CDD\|184508	PRK14102, nifW, nitrogenase-stabilizing/protective protein NifW.	5.92597e-50
NZ_AP018255.1\|WP_096687794.1\|3744500_3746051_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	4.00418e-20
NZ_AP018255.1\|WP_096687788.1\|3739054_3739270_-\|hypothetical-protein	gnl\|CDD\|377451	pfam05082, Rop-like, Rop-like. This family contains several uncharacterized bacterial proteins. These proteins are found in nitrogen fixation operons so are likely to play some role in this process. They consist of two alpha helices which are joined by a four residue linker. The helices form an antiparallel bundle and cross towards their termini. They are likely to form a rod-like dimer. They have structural similarity to the regulatory protein Rop, pfam01815.	3.7958e-26
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.41718e-35
NZ_AP018255.1\|WP_096687785.1\|3737470_3737845_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.14011e-45
NZ_AP018255.1\|WP_096687790.1\|3739789_3740203_-\|nitrogen-fixation-protein-NifX	gnl\|CDD\|131711	TIGR02663, Protein_NifX, nitrogen fixation protein NifX. Members of this family are NifX proteins encoded within operons for nitrogen fixation in a number of bacteria. NifX, NafY, and the C-terminal region of NifB all belong to the pfam02579 and are involved in MoFe cofactor biosynthesis. NifX is a nitrogenase accessory protein with a role in expression of the MoFe cofactor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation].	3.34568e-57

>NZ_AP018255.1|WP_096687792.1|3740902_3742222_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN
MAIVSNSNKPVVVNPLKQSQTLGAAMAFLGLKGMVPLLHGSQGCTAFAKVIMVRHFREAIPLATTAMTEVTTILGGEENITQAILTLMQKSQPEIIGLCTTALTETRGDDMQGILKDFRKRHPELNDLPIVLVSSPDFKGALQDGFAAAVEAIVRELPQPGKTIPQQVNILASSAFTPGDIQQVKDIVTEFGLVPIVVPDLSASMDGHLADSWSPITVGGTTVEELRKIGSSAFTLALGESVRTAASILEERFQIPYEVFTELTGLHRVDEFMQALSDLSGLSVPDKFRWQRRQLQDAMLDTHFYFGRKRISLALEPDLLWSTVLFLQSMGAEIQAAVTTTRSPLLENLPIDKVVIGDYEDFEKLAVGSDLLIGNSHAGNIARRLGIPLYRQGIPIYDRLGNGQVTKIGYKGTMDILFDIGNILLETEERKARELSYEM
>NZ_AP018255.1|WP_096687791.1|3740202_3740499_+|hypothetical-protein
MILDFGLYGRVALGRVYEVVSTVLGYLLGRVYVIVSTVLGYLLGRVYEIVSTVLGYLLTRPYEVVSTVLGYLLGRVYEIVSTVLGYLLTRPYEIVGTV
>NZ_AP018255.1|WP_096687790.1|3739789_3740203_-|nitrogen-fixation-protein-NifX
MKIAFTTSDRVHINAHFGWAKEIDVYEISDNGYEFIETLKFEGDLKQDGNEDKVTPKLEALYDCTIVYVSAIGGTAAAKLIKKGVTPVKAKSDDDKIVDVLDKLVITLKGSPPPWLRKALQQKPSSFEDDLEEETVV
>NZ_AP018255.1|WP_096687789.1|3739316_3739793_-|NifX-associated-nitrogen-fixation-protein
MSDTNSVKPDSSFEVKNSAFLQAIAQQIRGQDTYGVYRSWSDELLLKPYIVSKQKKREIPIDGEVDPMTISRINAFYRAAAACIEKETGFLSQVVVDLNHEGFGWILVFAGHLILIRKTMRDAHRFGFDSLDKTAEEGDKLVAKAVDIAKRFAEVGKL
>NZ_AP018255.1|WP_096687788.1|3739054_3739270_-|hypothetical-protein
MTQASVDIEELKTQIRRLNSKAGQMKMDLHDLAEGLPTNYQQLMDVAAETYEIFRKLDEMKQQVKTLEQGK
>NZ_AP018255.1|WP_096687787.1|3738740_3739058_-|nitrogenase-stabilizing/protective-protein-NifW
MSKDFDTFNQIVDAEEYFKFFELPYDAKIVNVNRLHILKKFSLYIKEIDEQNPGLSFGEKLDLYSAALNKAYEVFLDSTPQEQKLFKVFNQKPKNVVTLTEITSD
>NZ_AP018255.1|WP_096687786.1|3737926_3738730_-|HesA/MoeB/ThiF-family-protein
MIDLTPTELERYRRQMMLPNFGEMAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGKLILVRGGDLRLDDMNRQVLMTDDWVNKPRVFKAKETLEALNPDVQVEAVFDYITKENVDALVQSADMALDCAHNFAERDLLNEACVRWRKPMVEAAMDGMEAYLTTIIPGVTPCLSCLFPEKPVWDKRAFAVLGAVSGTLACLTALEAVKLITGFSQPLLSQLLTIDLHRMEFAKRRSYRDRECPVCGNNAPWRYSSSKQVETTSNCKSA
>NZ_AP018255.1|WP_096687785.1|3737470_3737845_-|iron-sulfur-cluster-assembly-accessory-protein
MAVTLTEKAESRLRAFLLGSTPDTGAPTTKGIRVLAKNGGCNGYEYGMEVTSSPKPDDVVLLQGNVPIYLDPKSAPLLEGMVIDFVEGVIESGFKFTNPNATNTCSCGKSFSAGDCTPKGTPCT
>NZ_AP018255.1|WP_019490231.1|3737052_3737352_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MATYQVRLINKKEELDTVIEVDEDTTILDGAEEAGIELPFSCHSGSCSSCVGKIVEGEVDQSDQIFLDDEQMSKGFALLCVTYPRSNCTIKTHQEPYLV
>NZ_AP018255.1|WP_096687784.1|3735562_3736501_-|protoheme-IX-farnesyltransferase
MVRISIARGHGNILPVIADYYELTQPRIIPLLLVVTAASIWIASNGKVNPMLLLWTLTGSTLASASAQTLNCIYDRDIDYLMERTRHRPIPSGKVQERNALIFGIILAAASFYLLAAFVNMLSALLAMLGIVFYVVIYTHFLKRHTPLNIVIGGAAGGIPALVGWAAVTGTVSSTAWWIFLILFLWTPPHFWALALTLRDDYAKVGIPMLPAVSGNIETGRQIFTYTVLLILSTFLMYDPLEMTGAFYICAAFILGAIFLQKAWAVLENPNNQKRAHNLFTYSIYYMILLCLSMIIDSLAITHQIINLISNG
>NZ_AP018255.1|WP_096687793.1|3742397_3743831_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE
MKINQAKINELLSEPGCEHNKKIGEKKKACSQQAQPGAAQGGCAFDGAMIALVPITDAAHLVHGPIACAGNSWGSRGSLSSGPTLYKMGFTTDLSENDVIFGAEKKLYKAILDIHSRYNPAAIFVYSTCVTALIGEDMDAVCQAAAKKINIPIIPVNAAGFVGSKNLGNRIGGEALLEYVVGTAEPEYTTPYDINIIGEYNIAGEMWNILPLLKKLGVRVLSKITGDARYQEICYAHRAKLNVMICSKALINMARKMEERYGIPYIEESFYGVDDMNRCLRNIAAKLGDPELQERAEQLIAEETARLNVELAPYRARLKGRRVVIYTGGVKSWSIISAAQDLGMDVVATSTKKSTEEDKARIKQLLGTDGITLEKGNPQEILRVIKDTNAEMLIAGGRNQYTALKARIPFLDINQERHHTYAGYSGMVEMARELDEALHSPVWEQIRRPAPWDMENEIFSDSSLEFDLFDLAEEVLV
>NZ_AP018255.1|WP_096687794.1|3744500_3746051_+|recombinase-family-protein
MDVWAYARVSTDEQALDEGALIKQMRRLRTAGATKIYYDVESRTSDKRKGLLQLIEDINASVPGKVSKLLFIRIDRLTSSSMTFYRLMDALKKKGIQPTAIDEPFDISSIGGELTIDVRLAASKYEVKMLGMRVKKERDTRKANKKPHWNTPLGYAIENDKYIIDNSPCVCIIESKQELTRAQLMRLVFDTFLTVGTVSQTVRQLHDIFGIQANATPKDSNSKINILSEEDEIVFENINKSRSSGLSLRYPHTGLKWSVSGLRSILVNPIYAGGTPYDTIVRPKGHRKPFDEWEIAWETHPDETIITREEHEQIKAMIRGNRNNRWANEQKYTNPFANLVKCAHCGAAYSRQCKKLVKKKNFVRHHYQCSFYRTGACQNGRMISSDELEKQVINHIVSEAEKLAHLIEQEQTVTEEPPEIKTLRASLNTLEALPSNPAIEKAKEDIRMQIANAIATTSNNSKQYLIAKERVTRAFANPRYWEGLETEDKRTLLQACVKKIIVDGALVTAVELLHLH
>NZ_AP018255.1|WP_096694146.1|3746310_3746547_+|DUF433-domain-containing-protein
MSHNQNDLLSRISIDPNICFGTPCIRGHRIWVSMILDYLAGGETIEAILEEYPGIEREDILACIAYGAERSDSFTFSS
>NZ_AP018255.1|WP_096687795.1|3749401_3750262_-|WYL-domain-containing-protein
MPRKKDTITLSIPPGTKEKLEEIARILDIKWGKEPSISGLIVAIAEKTLEVGKPFTLESNQVNALQQAIKALNDAGRIGEAQTVLALLLERGNLEAPLRQSLMKQISYSTQGWRIQIEDWMKKQQPFYILYHNSQGQELEYTVRHAEPRSFDSRFYLLVWCEETQDVENHIPELPELWHNRCLTYDRIRSAVPINGEWRGSLDYIKVYLHFRGWMKKSYRPKEDDIEDQDVGEVRQIVRNVTNELWLIREVLRYEENCVIVAPESLRNRFKQKLLSVCDLYDLERF
>NZ_AP018255.1|WP_096687796.1|3750473_3752954_+|hypothetical-protein
MNTAVKLKILTATLAAKVPLPNFQALISSLASKAETFALASQFDSPKLKRELSLAKPDHSTEELLQIELNGDKVIYQGQEIGKTQILYKSPLPGELQARLATESAIDRFLEYLQKLHQIVVLDESDRHVRVFIPNKQVQIPDFAKLWEKFLEEVAFCAYGDSKHQLPGLVQTFIQMLNSVTLSGRGFSTLDIPVLTKDQSRVQAGWYFAVVRDVRERQNKRQIQIEGLEKELAESDLDDKARKLKTKQLQEKQVMQIKEAEKYTDYFRKSFGKSLEEQNAARQELGQIETQLAQPKLAKSEQKKLQKQQDKLMGKVIFTPESIQEKLRLLNESNGSPLDFVKLDEKKNPEKFREIRKISTNFTETATNQINSTRGDIFTQCVFEMYRLLENKPNDPLPKPLLTEDPILGEMRAPGDDSKEFCYSCGVKLDPKTARWQVLRFMFERPSQRRQSSSSEGRPYICSSCSALAFASPLKVTDESVVLMLEPADSSIDFEEKKLKIKDYLRMLTNKEMHLSAGRYLIFNSNEDRTSSGDLASHKLGQLQYAMVKTAKNFSVEVLADLNFSLITQGSEKISLSSKYLLFIKGLMDSYGQQIVRAGKEVNMHLGDAVRYIQQDLPYLADYTLTKVANLSNQYQLEQIREMYWQAVQNDLRTKGVDMSSDKQPAIKARLYIDIAALTGITYAFAQSLEITARQANKGEDYVEREVSKLIEKVDDAVAFCYYATLGDVNKRSVQARLYSNPENYFIYQQAKNLLDRLELSDRELEDEKKKYLTLYADDILNIYQYFKDNGYSQEKEWKDLTYQLKLSLYTRFPELVRKQKSTSEK
>NZ_AP018255.1|WP_096687797.1|3752956_3753850_+|hypothetical-protein
MATGLSKTDANNPRLHFDIYAILEGSQELYFGHEVQVNVNLVETVKLKIKDELSSEPRSMEKCYLSPTKRRGVERRCLIWAPVATGELLGDKQDCGIPKTCAKQECPICSVYGGLEPGQKTLIGRVTHGGGVAVQEMFAVEKQRAMHPSRLASPKDKKDETPIPFKREYNQPGILYPVSNHALSITDKEFAAVAYAFLDALPRIGAGNPKGIAIAESKNQPLLVMDRYLVPKRKRPVISPAITNPEEAIATFERLAQKPENTSSYIQENHFERWIGDAALEKLQEYSSNFVDAILQS
>NZ_AP018255.1|WP_096687798.1|3753884_3754712_+|hypothetical-protein
MYCLQINLQPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRLGMMYAGLDIPNTRVNNDNPPFYALPQRYCALGAYSTKGKLSTVHRTYRKGMREFNHDVFSRIYQDGDKANFQLHTWEYFIAEELVSYVVTDSAKGLEHFQELVGYGCKLGKEGFAIVSQVSEIIELHQETLTKYPSTIVPMETLLQSNQFISGCDIYNLYRYQWAQNNTTESEQEGFLDNQETKVEGFIPFISAYFTDNSGNPPTLDYLTDGNDINIPISLINLLKGEAYV
>NZ_AP018255.1|WP_096687799.1|3754704_3757404_+|CRISPR-associated-helicase-Cas3'
MSKVKRKHSFNFGRVFFPGDKNKIPDKIIFQPLGNHVGNVIRILKKWNRDNFPSETSFERVLEAAKIHDVGKPPRFEIQSQSSKDGTFDKYIYSFRGHRYLAKSDKDAWAEALAIGHHDFSVEDICTQTYQLKKEYKYADILTKQPLAYAFELYILEMCDQIEAELACRVFEDGNQADSRTFMDFTISPDESSKEVYFIDPWPFGEQKSIELSFESWEMRPVDVDTDGELQKCIKNNQEQALGKTLDRIVKNWWQSEQGQPKKSDTKTVSLKPYPSVIESKIWTAEEFYKQLGGFTPNPMQKEMFESIYNSNPNIDKHPANLLKSPTGSGKLESVLFPTLASNWRLILPLPARSLLEDQKERIQKYLKKFSTVYKDREVSLVIDTGSQMYRYVYKNGVEAKQRTSNPRRHLYKGDVILTTIDKFLYRYFAFGGKQKSFTFPLRINRENTIICFDEAHSYDEISFTNFHSLVRSLYEAGRSIVLMTATMPEEYLKRLDYLEAIDYIHNSEKLNQLKQFQAQTLKQKYPNQKAFKWISDVERDDENPNIFQNQFAQFIIREWKNKPNRRIIIVVERVTDAAAIYEQLNNSLDCTTDESGRLLFLYHGRIADQLRPDIYKQIQERDSKDQPYILITTRAIEVGCDLNAEVLISEICPPENLIQRAGRCNRKGNIPDAKVVVIGKSIAKFANSLDESAWQKYQTLLQSLQEFDTQKITKCISVSEQVDDYRVVELFSMLHDYVYGADLTCKHAHEKGLIITRSWTPSATIIHKDGSEKPHTITVPIDRLITNKDRGNDFGNICVLEHYYNVETTNWDKRDLSWGCAYSKDIVIEIHKNHEGAACFDGKPEYQYNPNLGFVNLPGVFIKLKGKNNNFEEKLLYKDKNNKSVIITYTKALKDDSD
>NZ_AP018255.1|WP_096687800.1|3757460_3758303_+|CRISPR-associated-endoribonuclease-Cas6
MPHSLVLNLIPQSTIYPQFLTGRHYHALFLNLISSVDRSLGDSLHESNADKAFTLSPLQVKLFDGERRRDKGKSYVLQYQYEQPIPPGTPCWWRISLLDDTLFSKLTQLWLNINPEQPWHLGSADLFITNIQGTPQSIQPWANACSYSQLYERASNIDKTIDFVFATPTAFRQGSFDTALPSRDSVFKSLLQRWNKYSEIEFNSEFIESIFPSFFNIKTEIARDSRSKFIGCIGEISYRIMGEIEAEAIKQINTLADFALYAGVGRKTPMGMGMVRRIKR
>NZ_AP018255.1|WP_096687801.1|3758351_3758936_+|CRISPR-associated-protein-Cas4
MTEYIAIAALNQYAYCSHRCWRMFCVGEFTDNQYTIEGTSLHDRVHTFGEDNREETWKVRAIWLKSEQYNLIGKSDLIELENNRWIPVEYKRGKKGEWDNDELQVCAQALCLEEMTGTVVKTGYVYYAQTHQRQLVEISDALRQDTINTIAEVTKLIETGIMPPAVYGKKCKGCSLHDQCLPKLAQKVNKYHED

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Crispr_ID: NZ_AP018255_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_14

3747151-3748842

Unclear

I-D,II-B:NA

Consensus_repeat	Method
ATTGCAATTTAAAATAATCCCTAACAGGGA----------TTGAAAC	PILER-CR
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CRISPRCasFinder
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CRT

23 spacers

WYL,cas8b5,cas7,cas5,cas3,cas6,cas4,cas1,cas2

The CRISPR arrays of NZ_AP018255_14

>merge|NZ_AP018255|14|3747151-3748842|PILER-CR,CRISPRCasFinder,CRT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAAACAATGATTGTACTTAAAGGCAAAGTCGTTATATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTGAAGCTTATCTCTCTAATGGTAAGCAACTTATATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAACAAAATCATAGCGAATGGTGAGGAGTGGACAAAAGATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTGATTGGGTAAGCGCTGGGCGTGACTATTAAACATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTTGTAAAATATGCTTTTGATTTTTCATTAACAATCAATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTTAATATCGTACACCTGACTCGCACAAGTTGCATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAGTAGTAAATGAATTACAAACTACTTTTTTCAAATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACCAAAATCTTTGCAGCTACTTCGTTTTTAAGTCTATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTGCTTTCTGACCCTGGTAGCTGCCCACCTTGAAATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAGCCAGAGCTAAATCGTTACTAGCTTTATCAATTGCAAATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAAGGATTGCAACCTTAACAAATAATCCCTTTGCGTGATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAATTCCTAAGTTTAATTCAATATCACAGCAATAGATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTTTGATAATGACTCTATTAATATACGTTCTTTTGATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAAGATTATTGGCTGCTGCCGAAAAAGCGGAAGCATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAAGCTTTGCGACTTCATAACGCGCGCTTCTGTCACATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACCAGAAAATTCAAAATCACGGCGTTTTAATTTTTGACATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTCTAAATGCTACTGCAATGGCAAAAGCTTGTGAATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTATGCTATTAACCATGAGAATGGTGGAGTACTGGATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTGTATCGTATTTGCAGGCGCCAAAGCTCAGGGTATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACATAAGTGTTTCCAGCAACTAACTGAGATTTGTTAATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACTTAACTGATTTCTTCCAAGCCACATACTCTTTAGTGTTGATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACGTGCCTTTGTAATTATCTTATCTGGTTGATTTTTATTGCAATTTAAAATAATCCCTAACAGGGATTGAAACAGTAACCTTCGTTGGGCACAAAAAATATATGATTTATTGAATCGTAATTTCAAATAATCCCTAGTAGGGATTGAAAA

>NZ_AP018255|14|1|3747151-3748765|PILER-CR
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAACAATGATTGTACTTAAAGGCAAAGTCGTTAT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TGAAGCTTATCTCTCTAATGGTAAGCAACTTAT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AACAAAATCATAGCGAATGGTGAGGAGTGGACAAAAG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGATTGGGTAAGCGCTGGGCGTGACTATTAAAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTGTAAAATATGCTTTTGATTTTTCATTAACAATCA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTAATATCGTACACCTGACTCGCACAAGTTGC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGTAGTAAATGAATTACAAACTACTTTTTTCAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CAAAATCTTTGCAGCTACTTCGTTTTTAAGTCT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGCTTTCTGACCCTGGTAGCTGCCCACCTTGAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGCCAGAGCTAAATCGTTACTAGCTTTATCAATTGCAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGGATTGCAACCTTAACAAATAATCCCTTTGCGTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AATTCCTAAGTTTAATTCAATATCACAGCAATAG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTTGATAATGACTCTATTAATATACGTTCTTTTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGATTATTGGCTGCTGCCGAAAAAGCGGAAGC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGCTTTGCGACTTCATAACGCGCGCTTCTGTCAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CAGAAAATTCAAAATCACGGCGTTTTAATTTTTGAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTCTAAATGCTACTGCAATGGCAAAAGCTTGTGA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TATGCTATTAACCATGAGAATGGTGGAGTACTGG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGTATCGTATTTGCAGGCGCCAAAGCTCAGGGT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	ATAAGTGTTTCCAGCAACTAACTGAGATTTGTTA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTAACTGATTTCTTCCAAGCCACATACTCTTTAGTGTTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	GTGCCTTTGTAATTATCTTATCTGGTTGATTTTT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC

>NZ_AP018255|14|13|3747151-3748842|CRISPRCasFinder
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAACAATGATTGTACTTAAAGGCAAAGTCGTTAT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TGAAGCTTATCTCTCTAATGGTAAGCAACTTAT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AACAAAATCATAGCGAATGGTGAGGAGTGGACAAAAG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGATTGGGTAAGCGCTGGGCGTGACTATTAAAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTGTAAAATATGCTTTTGATTTTTCATTAACAATCA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTAATATCGTACACCTGACTCGCACAAGTTGC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGTAGTAAATGAATTACAAACTACTTTTTTCAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CAAAATCTTTGCAGCTACTTCGTTTTTAAGTCT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGCTTTCTGACCCTGGTAGCTGCCCACCTTGAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGCCAGAGCTAAATCGTTACTAGCTTTATCAATTGCAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGGATTGCAACCTTAACAAATAATCCCTTTGCGTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AATTCCTAAGTTTAATTCAATATCACAGCAATAG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTTGATAATGACTCTATTAATATACGTTCTTTTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGATTATTGGCTGCTGCCGAAAAAGCGGAAGC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGCTTTGCGACTTCATAACGCGCGCTTCTGTCAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CAGAAAATTCAAAATCACGGCGTTTTAATTTTTGAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTCTAAATGCTACTGCAATGGCAAAAGCTTGTGA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TATGCTATTAACCATGAGAATGGTGGAGTACTGG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGTATCGTATTTGCAGGCGCCAAAGCTCAGGGT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	ATAAGTGTTTCCAGCAACTAACTGAGATTTGTTA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTAACTGATTTCTTCCAAGCCACATACTCTTTAGTGTTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	GTGCCTTTGTAATTATCTTATCTGGTTGATTTTT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGTAACCTTCGTTGGGCACAAAAAATATATGATTTATTGA
ATCGTAATTTCAAATAATCCCTAGTAGGGATTGAAAA

>NZ_AP018255|14|2|3747151-3748842|CRT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAACAATGATTGTACTTAAAGGCAAAGTCGTTAT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TGAAGCTTATCTCTCTAATGGTAAGCAACTTAT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AACAAAATCATAGCGAATGGTGAGGAGTGGACAAAAG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGATTGGGTAAGCGCTGGGCGTGACTATTAAAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTGTAAAATATGCTTTTGATTTTTCATTAACAATCA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTAATATCGTACACCTGACTCGCACAAGTTGC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGTAGTAAATGAATTACAAACTACTTTTTTCAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CAAAATCTTTGCAGCTACTTCGTTTTTAAGTCT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGCTTTCTGACCCTGGTAGCTGCCCACCTTGAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGCCAGAGCTAAATCGTTACTAGCTTTATCAATTGCAA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGGATTGCAACCTTAACAAATAATCCCTTTGCGTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AATTCCTAAGTTTAATTCAATATCACAGCAATAG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTTTGATAATGACTCTATTAATATACGTTCTTTTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGATTATTGGCTGCTGCCGAAAAAGCGGAAGC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AAGCTTTGCGACTTCATAACGCGCGCTTCTGTCAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	CAGAAAATTCAAAATCACGGCGTTTTAATTTTTGAC
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTCTAAATGCTACTGCAATGGCAAAAGCTTGTGA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TATGCTATTAACCATGAGAATGGTGGAGTACTGG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTGTATCGTATTTGCAGGCGCCAAAGCTCAGGGT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	ATAAGTGTTTCCAGCAACTAACTGAGATTTGTTA
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	TTAACTGATTTCTTCCAAGCCACATACTCTTTAGTGTTG
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	GTGCCTTTGTAATTATCTTATCTGGTTGATTTTT
ATTGCAATTTAAAATAATCCCTAACAGGGATTGAAAC	AGTAACCTTCGTTGGGCACAAAAAATATATGATTTATTGA
ATCGTAATTTCAAATAATCCCTAGTAGGGATTGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_AP018255.1\|WP_096694147.1\|3760084_3760357_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP018255.1\|WP_096687802.1\|3759027_3760032_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_AP018255.1\|WP_096687789.1\|3739316_3739793_-\|NifX-associated-nitrogen-fixation-protein	unknown	unknown	gnl\|CDD\|367430
NZ_AP018255.1\|WP_096687797.1\|3752956_3753850_+\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687801.1\|3758351_3758936_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP018255.1\|WP_096687798.1\|3753884_3754712_+\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_AP018255.1\|WP_096687786.1\|3737926_3738730_-\|HesA/MoeB/ThiF-family-protein	unknown	unknown	gnl\|CDD\|238386
NZ_AP018255.1\|WP_096687792.1\|3740902_3742222_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	unknown	unknown	gnl\|CDD\|237722
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018255.1\|WP_096687793.1\|3742397_3743831_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE	unknown	unknown	gnl\|CDD\|172952
NZ_AP018255.1\|WP_096687790.1\|3739789_3740203_-\|nitrogen-fixation-protein-NifX	unknown	unknown	gnl\|CDD\|131711
NZ_AP018255.1\|WP_096687794.1\|3744500_3746051_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_AP018255.1\|WP_096687788.1\|3739054_3739270_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377451
NZ_AP018255.1\|WP_096687791.1\|3740202_3740499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687796.1\|3750473_3752954_+\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP018255.1\|WP_096687803.1\|3764286_3764739_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376187
NZ_AP018255.1\|WP_096687787.1\|3738740_3739058_-\|nitrogenase-stabilizing/protective-protein-NifW	unknown	unknown	gnl\|CDD\|184508

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.39254e-25
NZ_AP018255.1\|WP_096694147.1\|3760084_3760357_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.22503e-38
NZ_AP018255.1\|WP_096687802.1\|3759027_3760032_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	5.73719e-140
NZ_AP018255.1\|WP_096687789.1\|3739316_3739793_-\|NifX-associated-nitrogen-fixation-protein	gnl\|CDD\|367430	pfam03270, DUF269, Protein of unknown function, DUF269. Members of this family may be involved in nitrogen fixation, since they are found within nitrogen fixation operons.	1.92519e-70
NZ_AP018255.1\|WP_096687801.1\|3758351_3758936_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.34276e-55
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.26115e-09
NZ_AP018255.1\|WP_096687786.1\|3737926_3738730_-\|HesA/MoeB/ThiF-family-protein	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	1.06076e-92
NZ_AP018255.1\|WP_096687792.1\|3740902_3742222_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	gnl\|CDD\|237722	PRK14476, PRK14476, nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional.	0
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.19805e-50
NZ_AP018255.1\|WP_096687793.1\|3742397_3743831_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE	gnl\|CDD\|172952	PRK14477, PRK14477, bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional.	0
NZ_AP018255.1\|WP_096687790.1\|3739789_3740203_-\|nitrogen-fixation-protein-NifX	gnl\|CDD\|131711	TIGR02663, Protein_NifX, nitrogen fixation protein NifX. Members of this family are NifX proteins encoded within operons for nitrogen fixation in a number of bacteria. NifX, NafY, and the C-terminal region of NifB all belong to the pfam02579 and are involved in MoFe cofactor biosynthesis. NifX is a nitrogenase accessory protein with a role in expression of the MoFe cofactor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation].	3.34568e-57
NZ_AP018255.1\|WP_096687794.1\|3744500_3746051_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	4.00418e-20
NZ_AP018255.1\|WP_096687788.1\|3739054_3739270_-\|hypothetical-protein	gnl\|CDD\|377451	pfam05082, Rop-like, Rop-like. This family contains several uncharacterized bacterial proteins. These proteins are found in nitrogen fixation operons so are likely to play some role in this process. They consist of two alpha helices which are joined by a four residue linker. The helices form an antiparallel bundle and cross towards their termini. They are likely to form a rod-like dimer. They have structural similarity to the regulatory protein Rop, pfam01815.	3.7958e-26
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.41718e-35
NZ_AP018255.1\|WP_096687803.1\|3764286_3764739_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	1.04066e-17
NZ_AP018255.1\|WP_096687787.1\|3738740_3739058_-\|nitrogenase-stabilizing/protective-protein-NifW	gnl\|CDD\|184508	PRK14102, nifW, nitrogenase-stabilizing/protective protein NifW.	5.92597e-50

>NZ_AP018255.1|WP_096694146.1|3746310_3746547_+|DUF433-domain-containing-protein
MSHNQNDLLSRISIDPNICFGTPCIRGHRIWVSMILDYLAGGETIEAILEEYPGIEREDILACIAYGAERSDSFTFSS
>NZ_AP018255.1|WP_096687794.1|3744500_3746051_+|recombinase-family-protein
MDVWAYARVSTDEQALDEGALIKQMRRLRTAGATKIYYDVESRTSDKRKGLLQLIEDINASVPGKVSKLLFIRIDRLTSSSMTFYRLMDALKKKGIQPTAIDEPFDISSIGGELTIDVRLAASKYEVKMLGMRVKKERDTRKANKKPHWNTPLGYAIENDKYIIDNSPCVCIIESKQELTRAQLMRLVFDTFLTVGTVSQTVRQLHDIFGIQANATPKDSNSKINILSEEDEIVFENINKSRSSGLSLRYPHTGLKWSVSGLRSILVNPIYAGGTPYDTIVRPKGHRKPFDEWEIAWETHPDETIITREEHEQIKAMIRGNRNNRWANEQKYTNPFANLVKCAHCGAAYSRQCKKLVKKKNFVRHHYQCSFYRTGACQNGRMISSDELEKQVINHIVSEAEKLAHLIEQEQTVTEEPPEIKTLRASLNTLEALPSNPAIEKAKEDIRMQIANAIATTSNNSKQYLIAKERVTRAFANPRYWEGLETEDKRTLLQACVKKIIVDGALVTAVELLHLH
>NZ_AP018255.1|WP_096687793.1|3742397_3743831_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifE
MKINQAKINELLSEPGCEHNKKIGEKKKACSQQAQPGAAQGGCAFDGAMIALVPITDAAHLVHGPIACAGNSWGSRGSLSSGPTLYKMGFTTDLSENDVIFGAEKKLYKAILDIHSRYNPAAIFVYSTCVTALIGEDMDAVCQAAAKKINIPIIPVNAAGFVGSKNLGNRIGGEALLEYVVGTAEPEYTTPYDINIIGEYNIAGEMWNILPLLKKLGVRVLSKITGDARYQEICYAHRAKLNVMICSKALINMARKMEERYGIPYIEESFYGVDDMNRCLRNIAAKLGDPELQERAEQLIAEETARLNVELAPYRARLKGRRVVIYTGGVKSWSIISAAQDLGMDVVATSTKKSTEEDKARIKQLLGTDGITLEKGNPQEILRVIKDTNAEMLIAGGRNQYTALKARIPFLDINQERHHTYAGYSGMVEMARELDEALHSPVWEQIRRPAPWDMENEIFSDSSLEFDLFDLAEEVLV
>NZ_AP018255.1|WP_096687792.1|3740902_3742222_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN
MAIVSNSNKPVVVNPLKQSQTLGAAMAFLGLKGMVPLLHGSQGCTAFAKVIMVRHFREAIPLATTAMTEVTTILGGEENITQAILTLMQKSQPEIIGLCTTALTETRGDDMQGILKDFRKRHPELNDLPIVLVSSPDFKGALQDGFAAAVEAIVRELPQPGKTIPQQVNILASSAFTPGDIQQVKDIVTEFGLVPIVVPDLSASMDGHLADSWSPITVGGTTVEELRKIGSSAFTLALGESVRTAASILEERFQIPYEVFTELTGLHRVDEFMQALSDLSGLSVPDKFRWQRRQLQDAMLDTHFYFGRKRISLALEPDLLWSTVLFLQSMGAEIQAAVTTTRSPLLENLPIDKVVIGDYEDFEKLAVGSDLLIGNSHAGNIARRLGIPLYRQGIPIYDRLGNGQVTKIGYKGTMDILFDIGNILLETEERKARELSYEM
>NZ_AP018255.1|WP_096687791.1|3740202_3740499_+|hypothetical-protein
MILDFGLYGRVALGRVYEVVSTVLGYLLGRVYVIVSTVLGYLLGRVYEIVSTVLGYLLTRPYEVVSTVLGYLLGRVYEIVSTVLGYLLTRPYEIVGTV
>NZ_AP018255.1|WP_096687790.1|3739789_3740203_-|nitrogen-fixation-protein-NifX
MKIAFTTSDRVHINAHFGWAKEIDVYEISDNGYEFIETLKFEGDLKQDGNEDKVTPKLEALYDCTIVYVSAIGGTAAAKLIKKGVTPVKAKSDDDKIVDVLDKLVITLKGSPPPWLRKALQQKPSSFEDDLEEETVV
>NZ_AP018255.1|WP_096687789.1|3739316_3739793_-|NifX-associated-nitrogen-fixation-protein
MSDTNSVKPDSSFEVKNSAFLQAIAQQIRGQDTYGVYRSWSDELLLKPYIVSKQKKREIPIDGEVDPMTISRINAFYRAAAACIEKETGFLSQVVVDLNHEGFGWILVFAGHLILIRKTMRDAHRFGFDSLDKTAEEGDKLVAKAVDIAKRFAEVGKL
>NZ_AP018255.1|WP_096687788.1|3739054_3739270_-|hypothetical-protein
MTQASVDIEELKTQIRRLNSKAGQMKMDLHDLAEGLPTNYQQLMDVAAETYEIFRKLDEMKQQVKTLEQGK
>NZ_AP018255.1|WP_096687787.1|3738740_3739058_-|nitrogenase-stabilizing/protective-protein-NifW
MSKDFDTFNQIVDAEEYFKFFELPYDAKIVNVNRLHILKKFSLYIKEIDEQNPGLSFGEKLDLYSAALNKAYEVFLDSTPQEQKLFKVFNQKPKNVVTLTEITSD
>NZ_AP018255.1|WP_096687786.1|3737926_3738730_-|HesA/MoeB/ThiF-family-protein
MIDLTPTELERYRRQMMLPNFGEMAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGKLILVRGGDLRLDDMNRQVLMTDDWVNKPRVFKAKETLEALNPDVQVEAVFDYITKENVDALVQSADMALDCAHNFAERDLLNEACVRWRKPMVEAAMDGMEAYLTTIIPGVTPCLSCLFPEKPVWDKRAFAVLGAVSGTLACLTALEAVKLITGFSQPLLSQLLTIDLHRMEFAKRRSYRDRECPVCGNNAPWRYSSSKQVETTSNCKSA
>NZ_AP018255.1|WP_096687795.1|3749401_3750262_-|WYL-domain-containing-protein
MPRKKDTITLSIPPGTKEKLEEIARILDIKWGKEPSISGLIVAIAEKTLEVGKPFTLESNQVNALQQAIKALNDAGRIGEAQTVLALLLERGNLEAPLRQSLMKQISYSTQGWRIQIEDWMKKQQPFYILYHNSQGQELEYTVRHAEPRSFDSRFYLLVWCEETQDVENHIPELPELWHNRCLTYDRIRSAVPINGEWRGSLDYIKVYLHFRGWMKKSYRPKEDDIEDQDVGEVRQIVRNVTNELWLIREVLRYEENCVIVAPESLRNRFKQKLLSVCDLYDLERF
>NZ_AP018255.1|WP_096687796.1|3750473_3752954_+|hypothetical-protein
MNTAVKLKILTATLAAKVPLPNFQALISSLASKAETFALASQFDSPKLKRELSLAKPDHSTEELLQIELNGDKVIYQGQEIGKTQILYKSPLPGELQARLATESAIDRFLEYLQKLHQIVVLDESDRHVRVFIPNKQVQIPDFAKLWEKFLEEVAFCAYGDSKHQLPGLVQTFIQMLNSVTLSGRGFSTLDIPVLTKDQSRVQAGWYFAVVRDVRERQNKRQIQIEGLEKELAESDLDDKARKLKTKQLQEKQVMQIKEAEKYTDYFRKSFGKSLEEQNAARQELGQIETQLAQPKLAKSEQKKLQKQQDKLMGKVIFTPESIQEKLRLLNESNGSPLDFVKLDEKKNPEKFREIRKISTNFTETATNQINSTRGDIFTQCVFEMYRLLENKPNDPLPKPLLTEDPILGEMRAPGDDSKEFCYSCGVKLDPKTARWQVLRFMFERPSQRRQSSSSEGRPYICSSCSALAFASPLKVTDESVVLMLEPADSSIDFEEKKLKIKDYLRMLTNKEMHLSAGRYLIFNSNEDRTSSGDLASHKLGQLQYAMVKTAKNFSVEVLADLNFSLITQGSEKISLSSKYLLFIKGLMDSYGQQIVRAGKEVNMHLGDAVRYIQQDLPYLADYTLTKVANLSNQYQLEQIREMYWQAVQNDLRTKGVDMSSDKQPAIKARLYIDIAALTGITYAFAQSLEITARQANKGEDYVEREVSKLIEKVDDAVAFCYYATLGDVNKRSVQARLYSNPENYFIYQQAKNLLDRLELSDRELEDEKKKYLTLYADDILNIYQYFKDNGYSQEKEWKDLTYQLKLSLYTRFPELVRKQKSTSEK
>NZ_AP018255.1|WP_096687797.1|3752956_3753850_+|hypothetical-protein
MATGLSKTDANNPRLHFDIYAILEGSQELYFGHEVQVNVNLVETVKLKIKDELSSEPRSMEKCYLSPTKRRGVERRCLIWAPVATGELLGDKQDCGIPKTCAKQECPICSVYGGLEPGQKTLIGRVTHGGGVAVQEMFAVEKQRAMHPSRLASPKDKKDETPIPFKREYNQPGILYPVSNHALSITDKEFAAVAYAFLDALPRIGAGNPKGIAIAESKNQPLLVMDRYLVPKRKRPVISPAITNPEEAIATFERLAQKPENTSSYIQENHFERWIGDAALEKLQEYSSNFVDAILQS
>NZ_AP018255.1|WP_096687798.1|3753884_3754712_+|hypothetical-protein
MYCLQINLQPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRLGMMYAGLDIPNTRVNNDNPPFYALPQRYCALGAYSTKGKLSTVHRTYRKGMREFNHDVFSRIYQDGDKANFQLHTWEYFIAEELVSYVVTDSAKGLEHFQELVGYGCKLGKEGFAIVSQVSEIIELHQETLTKYPSTIVPMETLLQSNQFISGCDIYNLYRYQWAQNNTTESEQEGFLDNQETKVEGFIPFISAYFTDNSGNPPTLDYLTDGNDINIPISLINLLKGEAYV
>NZ_AP018255.1|WP_096687799.1|3754704_3757404_+|CRISPR-associated-helicase-Cas3'
MSKVKRKHSFNFGRVFFPGDKNKIPDKIIFQPLGNHVGNVIRILKKWNRDNFPSETSFERVLEAAKIHDVGKPPRFEIQSQSSKDGTFDKYIYSFRGHRYLAKSDKDAWAEALAIGHHDFSVEDICTQTYQLKKEYKYADILTKQPLAYAFELYILEMCDQIEAELACRVFEDGNQADSRTFMDFTISPDESSKEVYFIDPWPFGEQKSIELSFESWEMRPVDVDTDGELQKCIKNNQEQALGKTLDRIVKNWWQSEQGQPKKSDTKTVSLKPYPSVIESKIWTAEEFYKQLGGFTPNPMQKEMFESIYNSNPNIDKHPANLLKSPTGSGKLESVLFPTLASNWRLILPLPARSLLEDQKERIQKYLKKFSTVYKDREVSLVIDTGSQMYRYVYKNGVEAKQRTSNPRRHLYKGDVILTTIDKFLYRYFAFGGKQKSFTFPLRINRENTIICFDEAHSYDEISFTNFHSLVRSLYEAGRSIVLMTATMPEEYLKRLDYLEAIDYIHNSEKLNQLKQFQAQTLKQKYPNQKAFKWISDVERDDENPNIFQNQFAQFIIREWKNKPNRRIIIVVERVTDAAAIYEQLNNSLDCTTDESGRLLFLYHGRIADQLRPDIYKQIQERDSKDQPYILITTRAIEVGCDLNAEVLISEICPPENLIQRAGRCNRKGNIPDAKVVVIGKSIAKFANSLDESAWQKYQTLLQSLQEFDTQKITKCISVSEQVDDYRVVELFSMLHDYVYGADLTCKHAHEKGLIITRSWTPSATIIHKDGSEKPHTITVPIDRLITNKDRGNDFGNICVLEHYYNVETTNWDKRDLSWGCAYSKDIVIEIHKNHEGAACFDGKPEYQYNPNLGFVNLPGVFIKLKGKNNNFEEKLLYKDKNNKSVIITYTKALKDDSD
>NZ_AP018255.1|WP_096687800.1|3757460_3758303_+|CRISPR-associated-endoribonuclease-Cas6
MPHSLVLNLIPQSTIYPQFLTGRHYHALFLNLISSVDRSLGDSLHESNADKAFTLSPLQVKLFDGERRRDKGKSYVLQYQYEQPIPPGTPCWWRISLLDDTLFSKLTQLWLNINPEQPWHLGSADLFITNIQGTPQSIQPWANACSYSQLYERASNIDKTIDFVFATPTAFRQGSFDTALPSRDSVFKSLLQRWNKYSEIEFNSEFIESIFPSFFNIKTEIARDSRSKFIGCIGEISYRIMGEIEAEAIKQINTLADFALYAGVGRKTPMGMGMVRRIKR
>NZ_AP018255.1|WP_096687801.1|3758351_3758936_+|CRISPR-associated-protein-Cas4
MTEYIAIAALNQYAYCSHRCWRMFCVGEFTDNQYTIEGTSLHDRVHTFGEDNREETWKVRAIWLKSEQYNLIGKSDLIELENNRWIPVEYKRGKKGEWDNDELQVCAQALCLEEMTGTVVKTGYVYYAQTHQRQLVEISDALRQDTINTIAEVTKLIETGIMPPAVYGKKCKGCSLHDQCLPKLAQKVNKYHED
>NZ_AP018255.1|WP_096687802.1|3759027_3760032_+|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTVYVTQEDTFIAKVDERLNVKFEKKTILDIPLLKIEGVVVMGRSSISPAAIIELINNKIPLTFLTNNGKYIARLEPEMSKNIFLRSAQWKAAGESVQAIHAAKGFVRGKLKNYRNSLLKTKRNYPDIDTSRGIAQIETSLLSLEKATSIDSIRGCEGAGSAAYFSCFDEFIRVDNFSFNNRNRRPPTDPVNSLLSLGYSLLRHDIQGALNIVGFDPYLGYLHTERYGRPSLALDLMEEFRPLVVDSLVLGVINLKMFKPSDFITEPVSNAVSLTKEKLHEFLKLYQEKKQAKFTHPVLGIKKTYQEAFETQARLLGKYLMGETDKYPPLVLK
>NZ_AP018255.1|WP_096694147.1|3760084_3760357_+|CRISPR-associated-endonuclease-Cas2
MFVVVSYDVPEDRRRTKIHKILKSYGQWMQYSVFECDLTDTQYAKLRARLSKVIKPKEDSIRFYTLCACCQPKVERIGGEMPRDNTIFFA
>NZ_AP018255.1|WP_096687803.1|3764286_3764739_+|nucleotidyltransferase-domain-containing-protein
MVNKTPTVAELRELSLRLPENIPYVKMLVLFGSRARGDIHANSDWDFAVICDENQRLDYVKDNPFLWFELPAKVGEILQINSDIIDVVELDHCSPLMGYHVARDAKVLYESKPESFLRFQCKAWKIYADTAKFRKAERESIKLWLNKRGL

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Crispr_ID: NZ_AP018255_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_15

3760621-3764240

Unclear

I-D,II-B:NA

Consensus_repeat	Method
ATTGCAATTTCAAATAATCCCTACCAGGGA----------TTGAAAC	PILER-CR
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CRISPRCasFinder
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACN	CRT

50 spacers

cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5,WYL

The CRISPR arrays of NZ_AP018255_15

>merge|NZ_AP018255|15|3760621-3764240|PILER-CR,CRISPRCasFinder,CRT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCAGAGTTGTCTCAAATTTTAGGAAATTTCAAATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCAATTTTTCCATTCGTTGACACACGGCTATTATCAGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCGGGTATCCCAGGTTTACCCAAAGCTTCTATAGCTATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAAACCAACACTAGCTAAGTCAGCTTTTGAAATTATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTTACATCAACAACGCCAGGAACAACGCCAGGAACATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATTTATAATATTGCACCTCGCACGCGCGGGGTTTTATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAATTGGATAGCCCCTAAATCGGATAAGTCTATCGTTATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACGCTTAAGCAGAGTAATAGGGATTTAATTCAAAAGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTCACCAGAAATAGAATGTAGCTAGTCATGGATTTAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAGATAATGTTTCTTCTTCTGAATCTGATGTGTTAGAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAACATCATTGGATAGAAGCACGCGTCTGGATAAGATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCTAAATTTGTTGTGCGCGGCGCGTACAATGCTTCATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATGAGGTGGTATGATGTTGAGCGACCAGCATGGATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATATATGAGATAGTTGACGCTGTAATTGAGTGGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCCTCCACCTTTGCTTTAAGTTCGGCAATACGCTTATCATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATTAGTGCTGATGTAGATGCTAATCTTGAAAAAGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACGCGGTTTGATACAGATGCTTTTGCCAAGTCATCAATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATCAACGTGCGGTAACTCGTCAGCTTTGTTTAAAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTGGGAAAAGCTAACAATAGCGACTCGGGTGGTTAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAACATTACTATATATATAAAAGACTACTTGATATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACGCTTCGTACTGCGATTATTCAGCAAGGTTATGTAAATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAGTAGAAAGTGACAAAGTACGCGCGGAGGCTCTTAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTTGACTCGTCAATTACAGGCATAGGCGCACTTCGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCGACTTGATAAAATTGATAGAATAGAAAATCGAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTCTTCACCATTTGGGCCACGTTCAAGCCCTGGAGGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTCCCTACTTTTGCATTTAGAGGTACTAATAATACGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACGAGCATCACTGAAAACATCAACGAGATTAAAAAAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATCCATAATTTACCCATTGAAAGATAGGGGTGATTAAAGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCAGGGGTGATATAGAAAATATCTGCACGAGTGCATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTGGACAATACAACGAATTAAATTTTGGGGGATTATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACGGAGATTGATTGTTCGTATTACTAAACCCTTCTAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAACTTTGTAGCGGCGCCCGTCCGATACATAGCGAATAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAAGATGCTTCGAGAGAAACTGAACGACATTTTGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAGAACATCCTTACTCATACAACAGGCGCCACAGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCAACTGTGATGCTTAATTGGGACATGCCTGTACTGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACGTTTATGATTCACGCAAAGTTGGTGGTGGTGAAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAGTATTTCCATAGTGCAAAGGCTGCCAGCATACAAAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAAAAAAGGAGAGTTGTCGGCTTTTTGGATATCTCATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTTTTGAGCGCATTGTTTCTATTGCTCAGGAATAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCCAGATAACCAGCACTTTAGATTCGTTTGTAATGGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCCAGGTTACAAGAAATCAAAAAGTTATCAAATTAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAGAGATGGTGGAGTAAAAGAAATATACTATGGTAAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAGCAAGTAACCCCGCGCATAGGGCACGGTTGCGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACAAGATTTAGAGCGGATATCACAGGAGAGCAATCAGGTATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACTACGAACGCTCCGAGAGCGCGTATTTTTCCGGTGGATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACACGCAGGTAAAACACAATGCGTAGTAATAAATGATATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCTAAGAATTGTTGAGTATCGCTATGCAAATATTTATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACCTAGCTACTATTGGAGTAGCAAGTATTAATAATGATAAATTGCAATTTCAAATAATCCCTACCAGGGATTGAAACATCTTCAAAGGCTATTTCAGCATAACGAACTGTGTAGATTGCAATTTCAAATAATCCCTATCAGGGATTGAAAGGGAAATTGGCTGGAGTCACTATATAGCCATTGCAATTTTAATAATCCCTTAAAGGGATTTAAAGC

>NZ_AP018255|15|2|3760621-3764175|PILER-CR
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAGAGTTGTCTCAAATTTTAGGAAATTTCAAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAATTTTTCCATTCGTTGACACACGGCTATTATCAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CGGGTATCCCAGGTTTACCCAAAGCTTCTATAGCT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAACCAACACTAGCTAAGTCAGCTTTTGAAATTAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTACATCAACAACGCCAGGAACAACGCCAGGAAC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATTTATAATATTGCACCTCGCACGCGCGGGGTTTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AATTGGATAGCCCCTAAATCGGATAAGTCTATCGTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCTTAAGCAGAGTAATAGGGATTTAATTCAAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCACCAGAAATAGAATGTAGCTAGTCATGGATTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGATAATGTTTCTTCTTCTGAATCTGATGTGTTAGA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACATCATTGGATAGAAGCACGCGTCTGGATAAGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAAATTTGTTGTGCGCGGCGCGTACAATGCTTC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATGAGGTGGTATGATGTTGAGCGACCAGCATGGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATATATGAGATAGTTGACGCTGTAATTGAGTGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCTCCACCTTTGCTTTAAGTTCGGCAATACGCTTATC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATTAGTGCTGATGTAGATGCTAATCTTGAAAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCGGTTTGATACAGATGCTTTTGCCAAGTCATCAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCAACGTGCGGTAACTCGTCAGCTTTGTTTAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TGGGAAAAGCTAACAATAGCGACTCGGGTGGTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACATTACTATATATATAAAAGACTACTTGATAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCTTCGTACTGCGATTATTCAGCAAGGTTATGTAAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGTAGAAAGTGACAAAGTACGCGCGGAGGCTCTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTGACTCGTCAATTACAGGCATAGGCGCACTTCG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CGACTTGATAAAATTGATAGAATAGAAAATCGA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCTTCACCATTTGGGCCACGTTCAAGCCCTGGAGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCCCTACTTTTGCATTTAGAGGTACTAATAATACG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GAGCATCACTGAAAACATCAACGAGATTAAAAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCCATAATTTACCCATTGAAAGATAGGGGTGATTAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAGGGGTGATATAGAAAATATCTGCACGAGTGC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TGGACAATACAACGAATTAAATTTTGGGGGATT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GGAGATTGATTGTTCGTATTACTAAACCCTTCTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACTTTGTAGCGGCGCCCGTCCGATACATAGCGAATA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAGATGCTTCGAGAGAAACTGAACGACATTTTG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGAACATCCTTACTCATACAACAGGCGCCACAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAACTGTGATGCTTAATTGGGACATGCCTGTACTG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GTTTATGATTCACGCAAAGTTGGTGGTGGTGAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGTATTTCCATAGTGCAAAGGCTGCCAGCATACAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAAAAAGGAGAGTTGTCGGCTTTTTGGATATCTC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTTTGAGCGCATTGTTTCTATTGCTCAGGAATA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCAGATAACCAGCACTTTAGATTCGTTTGTAATGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCAGGTTACAAGAAATCAAAAAGTTATCAAATTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGAGATGGTGGAGTAAAAGAAATATACTATGGTAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGCAAGTAACCCCGCGCATAGGGCACGGTTGCG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAGATTTAGAGCGGATATCACAGGAGAGCAATCAGGT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TACGAACGCTCCGAGAGCGCGTATTTTTCCGGTGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ACGCAGGTAAAACACAATGCGTAGTAATAAATGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAAGAATTGTTGAGTATCGCTATGCAAATATTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAGCTACTATTGGAGTAGCAAGTATTAATAATGATAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCTTCAAAGGCTATTTCAGCATAACGAACTGTGTAG
ATTGCAATTTCAAATAATCCCTATCAGGGATTGAAAG

>NZ_AP018255|15|14|3760621-3764175|CRISPRCasFinder
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAGAGTTGTCTCAAATTTTAGGAAATTTCAAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAATTTTTCCATTCGTTGACACACGGCTATTATCAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CGGGTATCCCAGGTTTACCCAAAGCTTCTATAGCT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAACCAACACTAGCTAAGTCAGCTTTTGAAATTAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTACATCAACAACGCCAGGAACAACGCCAGGAAC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATTTATAATATTGCACCTCGCACGCGCGGGGTTTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AATTGGATAGCCCCTAAATCGGATAAGTCTATCGTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCTTAAGCAGAGTAATAGGGATTTAATTCAAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCACCAGAAATAGAATGTAGCTAGTCATGGATTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGATAATGTTTCTTCTTCTGAATCTGATGTGTTAGA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACATCATTGGATAGAAGCACGCGTCTGGATAAGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAAATTTGTTGTGCGCGGCGCGTACAATGCTTC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATGAGGTGGTATGATGTTGAGCGACCAGCATGGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATATATGAGATAGTTGACGCTGTAATTGAGTGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCTCCACCTTTGCTTTAAGTTCGGCAATACGCTTATC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATTAGTGCTGATGTAGATGCTAATCTTGAAAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCGGTTTGATACAGATGCTTTTGCCAAGTCATCAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCAACGTGCGGTAACTCGTCAGCTTTGTTTAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TGGGAAAAGCTAACAATAGCGACTCGGGTGGTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACATTACTATATATATAAAAGACTACTTGATAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCTTCGTACTGCGATTATTCAGCAAGGTTATGTAAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGTAGAAAGTGACAAAGTACGCGCGGAGGCTCTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTGACTCGTCAATTACAGGCATAGGCGCACTTCG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CGACTTGATAAAATTGATAGAATAGAAAATCGA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCTTCACCATTTGGGCCACGTTCAAGCCCTGGAGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCCCTACTTTTGCATTTAGAGGTACTAATAATACG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GAGCATCACTGAAAACATCAACGAGATTAAAAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCCATAATTTACCCATTGAAAGATAGGGGTGATTAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAGGGGTGATATAGAAAATATCTGCACGAGTGC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TGGACAATACAACGAATTAAATTTTGGGGGATT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GGAGATTGATTGTTCGTATTACTAAACCCTTCTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACTTTGTAGCGGCGCCCGTCCGATACATAGCGAATA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAGATGCTTCGAGAGAAACTGAACGACATTTTG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGAACATCCTTACTCATACAACAGGCGCCACAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAACTGTGATGCTTAATTGGGACATGCCTGTACTG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GTTTATGATTCACGCAAAGTTGGTGGTGGTGAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGTATTTCCATAGTGCAAAGGCTGCCAGCATACAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAAAAAGGAGAGTTGTCGGCTTTTTGGATATCTC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTTTGAGCGCATTGTTTCTATTGCTCAGGAATA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCAGATAACCAGCACTTTAGATTCGTTTGTAATGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCAGGTTACAAGAAATCAAAAAGTTATCAAATTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGAGATGGTGGAGTAAAAGAAATATACTATGGTAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGCAAGTAACCCCGCGCATAGGGCACGGTTGCG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAGATTTAGAGCGGATATCACAGGAGAGCAATCAGGT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TACGAACGCTCCGAGAGCGCGTATTTTTCCGGTGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ACGCAGGTAAAACACAATGCGTAGTAATAAATGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAAGAATTGTTGAGTATCGCTATGCAAATATTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAGCTACTATTGGAGTAGCAAGTATTAATAATGATAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCTTCAAAGGCTATTTCAGCATAACGAACTGTGTAG
ATTGCAATTTCAAATAATCCCTATCAGGGATTGAAAG

>NZ_AP018255|15|3|3760621-3764240|CRT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAGAGTTGTCTCAAATTTTAGGAAATTTCAAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAATTTTTCCATTCGTTGACACACGGCTATTATCAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CGGGTATCCCAGGTTTACCCAAAGCTTCTATAGCT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAACCAACACTAGCTAAGTCAGCTTTTGAAATTAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTACATCAACAACGCCAGGAACAACGCCAGGAAC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATTTATAATATTGCACCTCGCACGCGCGGGGTTTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AATTGGATAGCCCCTAAATCGGATAAGTCTATCGTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCTTAAGCAGAGTAATAGGGATTTAATTCAAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCACCAGAAATAGAATGTAGCTAGTCATGGATTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGATAATGTTTCTTCTTCTGAATCTGATGTGTTAGA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACATCATTGGATAGAAGCACGCGTCTGGATAAGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAAATTTGTTGTGCGCGGCGCGTACAATGCTTC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATGAGGTGGTATGATGTTGAGCGACCAGCATGGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATATATGAGATAGTTGACGCTGTAATTGAGTGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCTCCACCTTTGCTTTAAGTTCGGCAATACGCTTATC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATTAGTGCTGATGTAGATGCTAATCTTGAAAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCGGTTTGATACAGATGCTTTTGCCAAGTCATCAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCAACGTGCGGTAACTCGTCAGCTTTGTTTAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TGGGAAAAGCTAACAATAGCGACTCGGGTGGTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACATTACTATATATATAAAAGACTACTTGATAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GCTTCGTACTGCGATTATTCAGCAAGGTTATGTAAAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGTAGAAAGTGACAAAGTACGCGCGGAGGCTCTTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTGACTCGTCAATTACAGGCATAGGCGCACTTCG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CGACTTGATAAAATTGATAGAATAGAAAATCGA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCTTCACCATTTGGGCCACGTTCAAGCCCTGGAGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TCCCTACTTTTGCATTTAGAGGTACTAATAATACG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GAGCATCACTGAAAACATCAACGAGATTAAAAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCCATAATTTACCCATTGAAAGATAGGGGTGATTAAAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAGGGGTGATATAGAAAATATCTGCACGAGTGC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TGGACAATACAACGAATTAAATTTTGGGGGATT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GGAGATTGATTGTTCGTATTACTAAACCCTTCTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AACTTTGTAGCGGCGCCCGTCCGATACATAGCGAATA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAGATGCTTCGAGAGAAACTGAACGACATTTTG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGAACATCCTTACTCATACAACAGGCGCCACAG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CAACTGTGATGCTTAATTGGGACATGCCTGTACTG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	GTTTATGATTCACGCAAAGTTGGTGGTGGTGAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGTATTTCCATAGTGCAAAGGCTGCCAGCATACAAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAAAAAGGAGAGTTGTCGGCTTTTTGGATATCTC
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TTTTGAGCGCATTGTTTCTATTGCTCAGGAATA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCAGATAACCAGCACTTTAGATTCGTTTGTAATGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CCAGGTTACAAGAAATCAAAAAGTTATCAAATTA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGAGATGGTGGAGTAAAAGAAATATACTATGGTAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AGCAAGTAACCCCGCGCATAGGGCACGGTTGCG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	AAGATTTAGAGCGGATATCACAGGAGAGCAATCAGGT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	TACGAACGCTCCGAGAGCGCGTATTTTTCCGGTGG
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ACGCAGGTAAAACACAATGCGTAGTAATAAATGAT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAAGAATTGTTGAGTATCGCTATGCAAATATTT
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	CTAGCTACTATTGGAGTAGCAAGTATTAATAATGATAA
ATTGCAATTTCAAATAATCCCTACCAGGGATTGAAAC	ATCTTCAAAGGCTATTTCAGCATAACGAACTGTGTAG
ATTGCAATTTCAAATAATCCCTATCAGGGATTGAAAG	GGAAATTGGCTGGAGTCACTATATAGCC
ATTGCAATTTTAATAATCCCTTAAAGGGATTTAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_AP018255.1\|WP_096687808.1\|3772247_3773999_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|227265
NZ_AP018255.1\|WP_096687802.1\|3759027_3760032_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_AP018255.1\|WP_096687796.1\|3750473_3752954_+\|hypothetical-protein	cas8b5	mkCas0131_cas8b5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687806.1\|3768939_3769317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096687805.1\|3765398_3768524_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018255.1\|WP_096687809.1\|3775800_3777288_-\|nitrogenase-molybdenum-iron-protein-alpha-chain	unknown	unknown	gnl\|CDD\|162284
NZ_AP018255.1\|WP_096687798.1\|3753884_3754712_+\|hypothetical-protein	cas5	cls000047_cas5_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687810.1\|3778835_3779147_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_AP018255.1\|WP_096687811.1\|3779139_3779451_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274227
NZ_AP018255.1\|WP_096694147.1\|3760084_3760357_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP018255.1\|WP_096687807.1\|3770009_3772100_+\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018255.1\|WP_096687797.1\|3752956_3753850_+\|hypothetical-protein	cas7	cls000038_cas7_CAS-I-B	unknown
NZ_AP018255.1\|WP_096687801.1\|3758351_3758936_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP018255.1\|WP_096687804.1\|3764748_3765192_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|366864
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP018255.1\|WP_096687812.1\|3780321_3781074_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP018255.1\|WP_096687803.1\|3764286_3764739_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376187

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096694146.1\|3746310_3746547_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.39254e-25
NZ_AP018255.1\|WP_096687802.1\|3759027_3760032_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	5.73719e-140
NZ_AP018255.1\|WP_096687808.1\|3772247_3773999_+\|AAA-family-ATPase	gnl\|CDD\|227265	COG4928, COG4928, Predicted P-loop ATPase [General function prediction only].	7.34578e-60
NZ_AP018255.1\|WP_096687805.1\|3765398_3768524_-\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	3.19017e-75
NZ_AP018255.1\|WP_096687809.1\|3775800_3777288_-\|nitrogenase-molybdenum-iron-protein-alpha-chain	gnl\|CDD\|162284	TIGR01282, Nitrogenase_molybdenum-iron_protein_alpha_chain, nitrogenase molybdenum-iron protein alpha chain. Nitrogenase consists of alpha (NifD) and beta (NifK) subunits of the molybdenum-iron protein and an ATP-binding iron-sulfur protein (NifH). This model describes a large clade of NifD proteins, but excludes a lineage that contains putative NifD and NifD homologs from species with vanadium-dependent nitrogenases. [Central intermediary metabolism, Nitrogen fixation].	0
NZ_AP018255.1\|WP_096687810.1\|3778835_3779147_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	2.07682e-16
NZ_AP018255.1\|WP_096687795.1\|3749401_3750262_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.26115e-09
NZ_AP018255.1\|WP_096687811.1\|3779139_3779451_-\|hypothetical-protein	gnl\|CDD\|274227	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family. This bacterial protein family has a very similar seed alignment to that of pfam03693 but is a more stringent model with higher cutoff scores. Proteins that score above the trusted cutoff to this model almost invariably are found adjacent to a ParE family protein (pfam05016), where ParE is the killing partner of an addiction module for plasmid stabilization. Members of this family, therefore, are putative addiction module antidote proteins. Some are encoded on plasmids or in prophage regions, but others appear chromosomal. A genome may contain several identical copies, such as the four in Magnetococcus sp. MC-1. This family is named for one member, CC2985 of Caulobacter crescentus CB15. [Cellular processes, Other, Mobile and extrachromosomal element functions, Plasmid functions].	5.79745e-05
NZ_AP018255.1\|WP_096694147.1\|3760084_3760357_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.22503e-38
NZ_AP018255.1\|WP_096687807.1\|3770009_3772100_+\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
NZ_AP018255.1\|WP_096687800.1\|3757460_3758303_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.19805e-50
NZ_AP018255.1\|WP_096687801.1\|3758351_3758936_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.34276e-55
NZ_AP018255.1\|WP_096687804.1\|3764748_3765192_+\|DUF86-domain-containing-protein	gnl\|CDD\|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	9.43772e-19
NZ_AP018255.1\|WP_096687799.1\|3754704_3757404_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.41718e-35
NZ_AP018255.1\|WP_096687812.1\|3780321_3781074_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.51881e-18
NZ_AP018255.1\|WP_096687803.1\|3764286_3764739_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	1.04066e-17

>NZ_AP018255.1|WP_096694147.1|3760084_3760357_+|CRISPR-associated-endonuclease-Cas2
MFVVVSYDVPEDRRRTKIHKILKSYGQWMQYSVFECDLTDTQYAKLRARLSKVIKPKEDSIRFYTLCACCQPKVERIGGEMPRDNTIFFA
>NZ_AP018255.1|WP_096687802.1|3759027_3760032_+|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTVYVTQEDTFIAKVDERLNVKFEKKTILDIPLLKIEGVVVMGRSSISPAAIIELINNKIPLTFLTNNGKYIARLEPEMSKNIFLRSAQWKAAGESVQAIHAAKGFVRGKLKNYRNSLLKTKRNYPDIDTSRGIAQIETSLLSLEKATSIDSIRGCEGAGSAAYFSCFDEFIRVDNFSFNNRNRRPPTDPVNSLLSLGYSLLRHDIQGALNIVGFDPYLGYLHTERYGRPSLALDLMEEFRPLVVDSLVLGVINLKMFKPSDFITEPVSNAVSLTKEKLHEFLKLYQEKKQAKFTHPVLGIKKTYQEAFETQARLLGKYLMGETDKYPPLVLK
>NZ_AP018255.1|WP_096687801.1|3758351_3758936_+|CRISPR-associated-protein-Cas4
MTEYIAIAALNQYAYCSHRCWRMFCVGEFTDNQYTIEGTSLHDRVHTFGEDNREETWKVRAIWLKSEQYNLIGKSDLIELENNRWIPVEYKRGKKGEWDNDELQVCAQALCLEEMTGTVVKTGYVYYAQTHQRQLVEISDALRQDTINTIAEVTKLIETGIMPPAVYGKKCKGCSLHDQCLPKLAQKVNKYHED
>NZ_AP018255.1|WP_096687800.1|3757460_3758303_+|CRISPR-associated-endoribonuclease-Cas6
MPHSLVLNLIPQSTIYPQFLTGRHYHALFLNLISSVDRSLGDSLHESNADKAFTLSPLQVKLFDGERRRDKGKSYVLQYQYEQPIPPGTPCWWRISLLDDTLFSKLTQLWLNINPEQPWHLGSADLFITNIQGTPQSIQPWANACSYSQLYERASNIDKTIDFVFATPTAFRQGSFDTALPSRDSVFKSLLQRWNKYSEIEFNSEFIESIFPSFFNIKTEIARDSRSKFIGCIGEISYRIMGEIEAEAIKQINTLADFALYAGVGRKTPMGMGMVRRIKR
>NZ_AP018255.1|WP_096687799.1|3754704_3757404_+|CRISPR-associated-helicase-Cas3'
MSKVKRKHSFNFGRVFFPGDKNKIPDKIIFQPLGNHVGNVIRILKKWNRDNFPSETSFERVLEAAKIHDVGKPPRFEIQSQSSKDGTFDKYIYSFRGHRYLAKSDKDAWAEALAIGHHDFSVEDICTQTYQLKKEYKYADILTKQPLAYAFELYILEMCDQIEAELACRVFEDGNQADSRTFMDFTISPDESSKEVYFIDPWPFGEQKSIELSFESWEMRPVDVDTDGELQKCIKNNQEQALGKTLDRIVKNWWQSEQGQPKKSDTKTVSLKPYPSVIESKIWTAEEFYKQLGGFTPNPMQKEMFESIYNSNPNIDKHPANLLKSPTGSGKLESVLFPTLASNWRLILPLPARSLLEDQKERIQKYLKKFSTVYKDREVSLVIDTGSQMYRYVYKNGVEAKQRTSNPRRHLYKGDVILTTIDKFLYRYFAFGGKQKSFTFPLRINRENTIICFDEAHSYDEISFTNFHSLVRSLYEAGRSIVLMTATMPEEYLKRLDYLEAIDYIHNSEKLNQLKQFQAQTLKQKYPNQKAFKWISDVERDDENPNIFQNQFAQFIIREWKNKPNRRIIIVVERVTDAAAIYEQLNNSLDCTTDESGRLLFLYHGRIADQLRPDIYKQIQERDSKDQPYILITTRAIEVGCDLNAEVLISEICPPENLIQRAGRCNRKGNIPDAKVVVIGKSIAKFANSLDESAWQKYQTLLQSLQEFDTQKITKCISVSEQVDDYRVVELFSMLHDYVYGADLTCKHAHEKGLIITRSWTPSATIIHKDGSEKPHTITVPIDRLITNKDRGNDFGNICVLEHYYNVETTNWDKRDLSWGCAYSKDIVIEIHKNHEGAACFDGKPEYQYNPNLGFVNLPGVFIKLKGKNNNFEEKLLYKDKNNKSVIITYTKALKDDSD
>NZ_AP018255.1|WP_096687798.1|3753884_3754712_+|hypothetical-protein
MYCLQINLQPTAAMTFRILPGSILNIATYPFVPPTTFSGFLRRLGMMYAGLDIPNTRVNNDNPPFYALPQRYCALGAYSTKGKLSTVHRTYRKGMREFNHDVFSRIYQDGDKANFQLHTWEYFIAEELVSYVVTDSAKGLEHFQELVGYGCKLGKEGFAIVSQVSEIIELHQETLTKYPSTIVPMETLLQSNQFISGCDIYNLYRYQWAQNNTTESEQEGFLDNQETKVEGFIPFISAYFTDNSGNPPTLDYLTDGNDINIPISLINLLKGEAYV
>NZ_AP018255.1|WP_096687797.1|3752956_3753850_+|hypothetical-protein
MATGLSKTDANNPRLHFDIYAILEGSQELYFGHEVQVNVNLVETVKLKIKDELSSEPRSMEKCYLSPTKRRGVERRCLIWAPVATGELLGDKQDCGIPKTCAKQECPICSVYGGLEPGQKTLIGRVTHGGGVAVQEMFAVEKQRAMHPSRLASPKDKKDETPIPFKREYNQPGILYPVSNHALSITDKEFAAVAYAFLDALPRIGAGNPKGIAIAESKNQPLLVMDRYLVPKRKRPVISPAITNPEEAIATFERLAQKPENTSSYIQENHFERWIGDAALEKLQEYSSNFVDAILQS
>NZ_AP018255.1|WP_096687796.1|3750473_3752954_+|hypothetical-protein
MNTAVKLKILTATLAAKVPLPNFQALISSLASKAETFALASQFDSPKLKRELSLAKPDHSTEELLQIELNGDKVIYQGQEIGKTQILYKSPLPGELQARLATESAIDRFLEYLQKLHQIVVLDESDRHVRVFIPNKQVQIPDFAKLWEKFLEEVAFCAYGDSKHQLPGLVQTFIQMLNSVTLSGRGFSTLDIPVLTKDQSRVQAGWYFAVVRDVRERQNKRQIQIEGLEKELAESDLDDKARKLKTKQLQEKQVMQIKEAEKYTDYFRKSFGKSLEEQNAARQELGQIETQLAQPKLAKSEQKKLQKQQDKLMGKVIFTPESIQEKLRLLNESNGSPLDFVKLDEKKNPEKFREIRKISTNFTETATNQINSTRGDIFTQCVFEMYRLLENKPNDPLPKPLLTEDPILGEMRAPGDDSKEFCYSCGVKLDPKTARWQVLRFMFERPSQRRQSSSSEGRPYICSSCSALAFASPLKVTDESVVLMLEPADSSIDFEEKKLKIKDYLRMLTNKEMHLSAGRYLIFNSNEDRTSSGDLASHKLGQLQYAMVKTAKNFSVEVLADLNFSLITQGSEKISLSSKYLLFIKGLMDSYGQQIVRAGKEVNMHLGDAVRYIQQDLPYLADYTLTKVANLSNQYQLEQIREMYWQAVQNDLRTKGVDMSSDKQPAIKARLYIDIAALTGITYAFAQSLEITARQANKGEDYVEREVSKLIEKVDDAVAFCYYATLGDVNKRSVQARLYSNPENYFIYQQAKNLLDRLELSDRELEDEKKKYLTLYADDILNIYQYFKDNGYSQEKEWKDLTYQLKLSLYTRFPELVRKQKSTSEK
>NZ_AP018255.1|WP_096687795.1|3749401_3750262_-|WYL-domain-containing-protein
MPRKKDTITLSIPPGTKEKLEEIARILDIKWGKEPSISGLIVAIAEKTLEVGKPFTLESNQVNALQQAIKALNDAGRIGEAQTVLALLLERGNLEAPLRQSLMKQISYSTQGWRIQIEDWMKKQQPFYILYHNSQGQELEYTVRHAEPRSFDSRFYLLVWCEETQDVENHIPELPELWHNRCLTYDRIRSAVPINGEWRGSLDYIKVYLHFRGWMKKSYRPKEDDIEDQDVGEVRQIVRNVTNELWLIREVLRYEENCVIVAPESLRNRFKQKLLSVCDLYDLERF
>NZ_AP018255.1|WP_096694146.1|3746310_3746547_+|DUF433-domain-containing-protein
MSHNQNDLLSRISIDPNICFGTPCIRGHRIWVSMILDYLAGGETIEAILEEYPGIEREDILACIAYGAERSDSFTFSS
>NZ_AP018255.1|WP_096687803.1|3764286_3764739_+|nucleotidyltransferase-domain-containing-protein
MVNKTPTVAELRELSLRLPENIPYVKMLVLFGSRARGDIHANSDWDFAVICDENQRLDYVKDNPFLWFELPAKVGEILQINSDIIDVVELDHCSPLMGYHVARDAKVLYESKPESFLRFQCKAWKIYADTAKFRKAERESIKLWLNKRGL
>NZ_AP018255.1|WP_096687804.1|3764748_3765192_+|DUF86-domain-containing-protein
MKREPVTSRLVLIIKYLNRLREFESVSVDEYLNSFDYQLIAERLIQLLVDVASDINTYILVQLHNIVPSAYYDSFVEAGKKGIVTRELALGLAASAGMRNRLVHQYEVIDNRIVFSAIPIALDQYQLYVQEITSFLDSLEITEHDSI
>NZ_AP018255.1|WP_096687805.1|3765398_3768524_-|CHAT-domain-containing-protein
MFLSNRLQSFLVLLAFNITFQAAPLSGFAVKPFNMSQAVAQTSSASKNQADKLIKEGEQLRDSLQLQAALKKFSEALNIYRQNNNKAGEGKALNHLGNTYGDLNQVQEALSYYQQGIEVAKATGDTGLEARILSNIGLTYRDSGDLTRAIEYCNKAVSVARKSGNYETEALALKGLGAIAITSDIGKGIDYVEQALAAIRKANGTGDDRLRQRNLEASILMSLGGLYYAIGVGGGLTQTDVTPSQAPGKLLDKSLQYYQQAAVIAKETGDNFQRGKALSGVGSVYNIRSEFAQAVKSYEQAVEIFKKQGSQIQVRDTLSSLAEVYSNWNNKDKAISYYQQALAINQATNNPVTILDNNTSQGLIQVNIANAYADTSKYEQAIKFYEQAIKTLKTSLNQTGSISTSNPTEQFLVNKNKLLANQGIKASYLRLCVAYRTLGQDEASNKACKDASSISASTPEALPQKTSKELEEAQRSLASAQSVGNRNLEAFALAKIATAYVNLGEKKQAREYFQKAIELARTYPLFEYYALFQAGLFEQNQQQYNLAINYYKQAAASANKNNQKQEEANIFRQLGTLYYTRKNLPEATTALYNAIKVYESIRVDLTDKNQISIFETQAQVYSLLQKVLVAQNKYQEALEVSERGRARAFINLLAARQPQNKNNIPEILPPTIKDIQKIAKQQNATFVEYSIKDTDIYIWVVKPTGEIAFQKVNLNSNTPLKDVVATALDSIGATRGLTVVAPHNKKPEPNARQKLKALHELLITPIAQHLPKNPNERVIFVPQNELFLIPFPALQDNQGKYLIEKHTILTAPSIQLLQLTHERRPSSSQAVLVVGNPIMPGIPVRAGQPPQQLVSLPFAEKEAREIATMLNTKPLIGKDATKSQVKRLMTQARIIHLATHGLLDDFGDSIPGAIALAPSSTNLLKTQQSNDGLLTASEILNMKLNADLVVLSACQTGQGTLTGDGVIGLSRSLIAAGTKSVVVSLWSVDDASTKLLMTEFYRQMQKNPDKGAALRQAMLVTMKQYPSPEHWSAFTLIGESI
>NZ_AP018255.1|WP_096687806.1|3768939_3769317_+|hypothetical-protein
MAKTNGAKSETSTTESPSVSDAEDLAPVKDSSELVEGTQDIDDILNSLKTLLSTLEKLQKARQEVGDIKPLIGRMLDGEIIGGEDLEQLKTGVSGLSRLVRAYSDHQAALAKAQPARQLLDQVIK
>NZ_AP018255.1|WP_096687807.1|3770009_3772100_+|elongation-factor-G
MKDLTRYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVHEGAATTDFMEQEQERGITIQSAATTCFWNEHQFNIIDTPGHVDFTIEVYRSLKVLDGGIGVFCASGGVEPQSETNWRYANDSKVARVVYINKLDRIGADFYRVVKQINDVLAAKPLVMVLPIGRENDFVGVVDLLTRKAWIWDDSGDPMNYTIQEVPADMKDDVEMYREQLIETAVEQDDELMEKYLEGEELSIEQIKSCIRKGTINLSFFPTYCGSSFKNKGVQLVLDAVVDYLPNPTEVKPQPEVDLEGNETGQFAIVDPNKPLRALAFKIMDDRFGALTFTRLYSGILSKGDTILNTATGKTERISRLVEMHANDRQEIESAQAGDIVAIVGMKNVQTGHTLCDPKVPATLEPMVFPEPVISISVTPTKKGTSEKMGVALGKMVQEDPSFRVETDSESGETIIKGMGELHLDIKVDILRRTHGVEVEVGKPQVAYRESVTKRVEDGYVHKKQSGGSGQYAKIDYIIEPGEPGSGFQFETKVTGGSVPREYWPAVQKGFASSIDKGVLAGFPCVDLKFTLTDGGFHPVDSSAIAFEIAAKAAYRQTLPKASPQLLEPIMKVDVFTPEDYMGDAIGDLNRRRGIIKSQETGPTGARIKADVPLSEMFGYIGDLRTMTSGRGQFSMEFSHYAPCPANVAETVIKETKEREAAAAK
>NZ_AP018255.1|WP_096687808.1|3772247_3773999_+|AAA-family-ATPase
MTDTQDISTDSYLVDPENDLLGHASFAKYLADSICEMSFPEGFIIGIYGSWNSGKSTLLNFIAHYLNQKPDEEKPIIVPFNPWLFSGHQNITRRFFEQLQNVLSQEKAVPRGIRKAIADFAGVLSEIPLPYAQTGKAIVTLLDDKEKEASQFKEEVEKTLAKQNRRIVITVDDIDRLPGEDVKQLFRIFKAIPNFSNVVYVLVFDKEAVMKTIGETEETSQEAYLKKIIQAEFELPIPTKNLLRKLLSKKLNNIFADIPKEQFNQSRWSNIYFQGIDDFINNIPDISRLTNALTVTYPAVKGEVNPVDFIALECLRIFCPAIYEIIYQNPRAFAGEVNTSTDELRNLVNTWIAQLPSEDKQPVQNLLMQLFPKVKYVWSNSSPTEEESEWQKQLRICSLEIFPIYFRLTLSAYELSNTQIKAMLALANDAERFKEHLIELVKRKHTEGAAQASIFLEQLESSTVQCIPVNAIPSVVEALYDASEELVLSQENESNDIFDLGNEAIISRYISQLLHRIEESERFEVLKKAISSGKGLAIINQQIATVKEQLSQDSSDENLNEESLIGAQHLEELEQINPPNPSP
>NZ_AP018255.1|WP_096687809.1|3775800_3777288_-|nitrogenase-molybdenum-iron-protein-alpha-chain
MTPPDKNIVEEHQKLIEEVLEAYPEKSKKKRAKHLNVHEEGKSDCGVKSNIKSVPGVMTARGCAYAGSKGVVWGPIKDMIHISHGPVGCGYWSWSGRRNYYVGKTGVDAFGTMHFTSDFQERDIVFGGDKKLTKIIHEIEELFPLNKGISIQSECPIGLIGDDIEAVAKKTSKEIGKPVIPLRCEGFRGVSQSLGHHIANDAIRDWVFPHFDKAKKENTLDFEPGPYDVALIGDYNIGGDAWASRMLLEEMGLRVVAQWSGDGTINELIQGPAAKLVLIHCYRSMNYICRSLEESYGLPWMEFNFFGPTKIAASLREIAAKFDDKIQANAEKVIAKYQPVMDAVLQKYRPRLEGNTVMLYVGGLRPRHVVPAFEDIGIKVIGTGYEFAHSDDYKRTTNYIDNATIIYDDVTAYEFEEFVKAKKPDLIASGIKEKYVFQKMGLPFRQMHSWDYSGPYHGYDGFAIFARDMDLALNSPTWGLINTPWKKAEVTAKAA
>NZ_AP018255.1|WP_096687810.1|3778835_3779147_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MNKENSYTLYISERAKSDYKKIQRYTRDFYGKEQVLKYSALIKGCFAKITENPMLGHQRPDIPQTYKAYNVGKHIIVYRIEEQMVYVVAILHGSMNFSHQFDE
>NZ_AP018255.1|WP_096687811.1|3779139_3779451_-|hypothetical-protein
MAVNGIIIVLFTAKGVETMPRLDLGNPYDYYVQTLIDTGLYSTYTEVVKDALRQHMNTHAESKRIALFHATIAEGEADIQAGRVELYNPELIDRLTSEVLADE
>NZ_AP018255.1|WP_096687812.1|3780321_3781074_-|class-I-SAM-dependent-methyltransferase
MSSKTLYSEYSSFARILNEAWGPESSETALPHIEELLLKHLSKGANILELCCGTGQLAQKLQNKGYQVTGIDGSAEVLHYARENSPNSKFIHEDARFFKFPFKFDGVVCVDYGLNHVINHEELSSVFENVYAALIENGWFMFDLRLDKTYEGSWNNSMIGDVKDDYAWALKRLYKPEEKIGNIHITIFQLIEDNWQRADNTWLVRGYEQEEVISMLKNVGFTTVNCYSIEPNVAADDLDRVYFVCGKTIC

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Crispr_ID: NZ_AP018255_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_16

4178141-4178233

Orphan

Consensus_repeat	Method
ATAATGGCGCCAATTAATCCTAAAACCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_16

>merge|NZ_AP018255|16|4178141-4178233|CRISPRCasFinder
ATAATGGCGCCAATTAATCCTAAAACCACAAACAGTACTACCTGTTTACTCAACCAGTAGTACCGATAATGGCGCCAATTAATCCTAAAACCA

>NZ_AP018255|16|15|4178141-4178233|CRISPRCasFinder
ATAATGGCGCCAATTAATCCTAAAACCA	CAAACAGTACTACCTGTTTACTCAACCAGTAGTACCG
ATAATGGCGCCAATTAATCCTAAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096688126.1\|4181898_4182093_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096688117.1\|4170303_4170831_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377718
NZ_AP018255.1\|WP_096688122.1\|4175990_4176356_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694166.1\|4178398_4179757_-\|proton-extrusion-protein-PcxA	unknown	unknown	gnl\|CDD\|235046
NZ_AP018255.1\|WP_096688115.1\|4168647_4169568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096688125.1\|4180945_4181509_-\|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO	unknown	unknown	gnl\|CDD\|376698
NZ_AP018255.1\|WP_096729095.1\|4174797_4175538_+\|glycoside-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|381599
NZ_AP018255.1\|WP_096688114.1\|4167307_4168651_-\|DUF4255-domain-containing-protein	unknown	unknown	gnl\|CDD\|379449
NZ_AP018255.1\|WP_096688120.1\|4174323_4174785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096688123.1\|4176383_4177784_-\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_AP018255.1\|WP_096688124.1\|4179948_4180617_-\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
NZ_AP018255.1\|WP_096688130.1\|4186095_4186614_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_AP018255.1\|WP_096688129.1\|4185809_4186112_+\|DUF1778-domain-containing-protein	unknown	unknown	gnl\|CDD\|370057
NZ_AP018255.1\|WP_096688127.1\|4182270_4183407_-\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|168661
NZ_AP018255.1\|WP_096688116.1\|4169564_4170290_-\|phage-baseplate-protein	unknown	unknown	gnl\|CDD\|222907
NZ_AP018255.1\|WP_096688131.1\|4186717_4188262_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_AP018255.1\|WP_096694167.1\|4183592_4184240_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP018255.1\|WP_096688118.1\|4170937_4172737_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|226028
NZ_AP018255.1\|WP_096688119.1\|4173138_4173984_+\|EndoU-domain-containing-protein	unknown	unknown	gnl\|CDD\|373068
NZ_AP018255.1\|WP_096688128.1\|4184264_4185485_-\|DUF790-family-protein	unknown	unknown	gnl\|CDD\|368530

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096688117.1\|4170303_4170831_-\|phage-tail-protein	gnl\|CDD\|377718	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19. This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.	3.63293e-50
NZ_AP018255.1\|WP_096688114.1\|4167307_4168651_-\|DUF4255-domain-containing-protein	gnl\|CDD\|379449	pfam14065, DUF4255, Protein of unknown function (DUF4255). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 320 amino acids in length.	1.64074e-46
NZ_AP018255.1\|WP_096694166.1\|4178398_4179757_-\|proton-extrusion-protein-PcxA	gnl\|CDD\|235046	PRK02507, PRK02507, proton extrusion protein PcxA; Provisional.	0
NZ_AP018255.1\|WP_096688128.1\|4184264_4185485_-\|DUF790-family-protein	gnl\|CDD\|368530	pfam05626, DUF790, Protein of unknown function (DUF790). This family consists of several hypothetical archaeal proteins of unknown function.	0
NZ_AP018255.1\|WP_096688125.1\|4180945_4181509_-\|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO	gnl\|CDD\|376698	pfam01980, UPF0066, Uncharacterized protein family UPF0066.	5.98482e-53
NZ_AP018255.1\|WP_096729095.1\|4174797_4175538_+\|glycoside-hydrolase-family-protein	gnl\|CDD\|381599	cd00737, lyz_endolysin_autolysin, endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.	3.67423e-35
NZ_AP018255.1\|WP_096688123.1\|4176383_4177784_-\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	2.36474e-141
NZ_AP018255.1\|WP_096688124.1\|4179948_4180617_-\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	5.81564e-91
NZ_AP018255.1\|WP_096688130.1\|4186095_4186614_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.24106e-08
NZ_AP018255.1\|WP_096688129.1\|4185809_4186112_+\|DUF1778-domain-containing-protein	gnl\|CDD\|370057	pfam08681, DUF1778, Protein of unknown function (DUF1778). This is a family of uncharacterized proteins. The structure of one of the hypothetical proteins in this family has been solved and it forms a helix structure which may form interactions with DNA.	7.19018e-26
NZ_AP018255.1\|WP_096688127.1\|4182270_4183407_-\|NAD(P)-binding-protein	gnl\|CDD\|168661	PRK06753, PRK06753, hypothetical protein; Provisional.	8.82702e-72
NZ_AP018255.1\|WP_096688116.1\|4169564_4170290_-\|phage-baseplate-protein	gnl\|CDD\|222907	PHA02611, 51, baseplate hub assembly protein; Provisional.	0.00141276
NZ_AP018255.1\|WP_096688131.1\|4186717_4188262_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	3.14136e-104
NZ_AP018255.1\|WP_096694167.1\|4183592_4184240_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.25134e-13
NZ_AP018255.1\|WP_096688118.1\|4170937_4172737_-\|phage-tail-protein	gnl\|CDD\|226028	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only].	7.90766e-34
NZ_AP018255.1\|WP_096688119.1\|4173138_4173984_+\|EndoU-domain-containing-protein	gnl\|CDD\|373068	pfam14436, EndoU_bacteria, Bacterial EndoU nuclease. This is a bacterial virion of EndoU nuclease. It is found at C-terminal region of polymorphic toxin proteins.	5.42774e-33

>NZ_AP018255.1|WP_096688123.1|4176383_4177784_-|amidase
MNELDLAFTPALEMADLVRRRLLSPLELVNIYLERIERLNPLLGSYFTVTAQQAIADAEIKTKALASATNLPPFFGVPISTKDLNSVAGIPCTYGTKALINNIPDYDDVVITKIKQAGFIILGKTATSELGSFPYTEPTGFPPSRNPWNLEYTSGGSSGGAAAGVAAGLSPIAQGSDGGGSIRGPAACCGLFGIKPSRGRVSPGPAGDKFNGIAINGPISRTVADAAALLDVMSGNVAGDFYCLPSPECSFLEASKQQPGRLRIAYSTSFLPIGEADTTCKQAVLQTVKLLEELGHIVEEKCPDFSGLIEPFQIIWRNGVAAGGVPLEMLQPVNRWLLSKTDSAVNYLKAVANMQIVSRQIISFFDYFDVLLMPVFLHSPIHVGEWAHLSPEDIFEHIVQWVAPCPPANATGQPAVAIPVGFDSKGLPMSVQFVGKPAAECTLIRLAAQIEMAKPWISWRPNLDNI
>NZ_AP018255.1|WP_096688122.1|4175990_4176356_+|hypothetical-protein
MPVARAPNKDEKQYLQKLYNLLIKPIADIYTLTANSLPTFDIVNLFHLCEFYLPENSKITHQNDESLLQIFIDKLNPDGRIIFYSGSAARGTTLPLIQSFEESGKIRKLDEYKSLLIYTKA
>NZ_AP018255.1|WP_096729095.1|4174797_4175538_+|glycoside-hydrolase-family-protein
MKLQDILKLDKSLEFDYLRQDKELAKQVQIRLIDLKLLSGVADGAYGPRTKASLENFARAFDLLDILNAEFARKLIEAKNVPNLSVEIPKKLPQCGIELIKHFESCFLGAYPDPLTKCEPITIGWGSTKKRDGSPWYLGESILQQEADELLIYQLQNNYLPDLEKIPSWHELNTNQQGALLSFAYNLGSKFYGAAGFDSITKVLKSSNWSEIKETFIKYRNPGTNVEKGLLRRRQAEAELFLTPVG
>NZ_AP018255.1|WP_096688120.1|4174323_4174785_+|hypothetical-protein
MLLFFTMPLDETSPLNKGRLFLVDETKGIVGRWVATSSTADKQGINDWNVRGGVIPATYQLNPPLPFYSVAVNPVDLKHVKGVEGNGYPITPFEVKTVDGGTRSDLLIHKDANVPGSMGCIVLPESEFVDFEKVFQENCEGQSAVKLLVGYTY
>NZ_AP018255.1|WP_096688119.1|4173138_4173984_+|EndoU-domain-containing-protein
MPLLALQPKSGFLAVMLAFGVLLQLPSTAQETQNQQNQELIPFFDNEDNPVPLNFPPDQQLDISPPAPKLNAFDEAVLKACGPIGSNVLPNQFKQLLRKYPDILEKIRNSVGGEIRPGRKRRSDFLQDLTNIWFQRKGFEHIFCGEIYNANDIGGLHFYGRYLQLQNQGIGGRLPNNQKNQEVVPGVIYTMGVVIKQPNRTVTDVIKGYGYLSNAEEMLIDVTKIFKQQGNNEGACIYLVRDNDTGKTFPTVFVRREGAIITYYPDATPKGSNCKGSQPLP
>NZ_AP018255.1|WP_096688118.1|4170937_4172737_-|phage-tail-protein
MPITPTYPGVYIEEIPSGVRTITGIATSITAFIGRAARGPVDKPITINSYSDFERIFGGLWVDSSLSYAVRDFYLNGGSQAIIVRLYNSQQGQNSKSVLKVAGLTLQAAYEGAWGVNLRATVDVNVSEAMATQMGLTKANLFNLTVRDISLGGVQERFLNLTIAPGKPRSIDKVLEAESRLIRWNRPVSDVPTPDLPNAIVAAHTASQQLIDAQKQLIEAKNAKPQVPADITAAETLVTNAKTAVMNASQNLDDDVSKAEKQLEAAKKAVPPVPTDINTAKQALDSALNTMLASNGRSLTKNDNFTPNNAESQKKGLYALEKVDLFNLLCIPPYLDTGDVEASLISDAAAYCERRRAFLIIDPPSAWNTKDDAKEGIDNLGTRSNHSAVFFPRIKQPNPLRDNQLEDFAPCGVVAGNFARTDAQRGVWKAPAGIDATLVGVPQLSTPLTNGENGELNPLGINCLRTFPGVGRVLWGARTLQGDDRLASEWKYIPVRRLALYIEESLYRGTQWVVFEPNDEPLWAQIRLNIGAFMNNLFRQGAFQGSTPQDAYFVKCSSETTTQNDINLGIVNIVVGFAPLKPAEFVIIKIQQIAGQIDT
>NZ_AP018255.1|WP_096688117.1|4170303_4170831_-|phage-tail-protein
MEFSVNAQRFDPYKNFKFRVRWDNKYVAGVSKVGALKRTTEVVKHREGGDPSTSRKSPGRSEYEAIMLERGVTHDLEFEKWASKVWNYKNAQARPEQRTKEVSLADFRKDIIIDVFNEAGQKAISYKIYRCWVSEYQALPDLDANANAVAIQHIKLENEGWERDEEVKEPKEESF
>NZ_AP018255.1|WP_096688116.1|4169564_4170290_-|phage-baseplate-protein
MRALSAGELLTVWEKGLMQQPVKQALALLTAACPEIPTPQLAQLSIGQRDALLLTLRSGTFGSQIQSLATCGNCGENLELNFSVADICTSPPTSPLETFSLQVAGWNIEFRLPNSLDLMALASLHNQPSTLLERCLLQVKEHEEIQPMEKLPTEIASTVITQMAKLDPQADVQLNLCCPACSHQWQSTFDIVSFFWSEIHAWAIRTLREVHILASAYGWGEAEILAMSPYRRQLYLGMVGR
>NZ_AP018255.1|WP_096688115.1|4168647_4169568_-|hypothetical-protein
MSNYLSNIVARNNHQLETVQPRLPSLYESSMGTRNSDITTEFDEEIGINYLSGENIQELTRLSRNSVAEIHHPEEYPPWQQISYSPQSPSPEKETHIEKDFQRQTEYIYTHHKDESPTNLDSGFSYQPQTLSQVNPTVENKPSLVINNTNNYLQAVQSHNSKSTEPTFIQQLITKETFTKKIFTSTDTALTPEIQPLIWQQPATQLVEQVILPMRETAPSNTEKSLIQEEMSQTQPQTLITPKVSVVKELKPIPQKVEAAPTIQVTIGRIEVRATTPTTVSPSTKPKQKPAVMSLEEYLSQRGGAK
>NZ_AP018255.1|WP_096688114.1|4167307_4168651_-|DUF4255-domain-containing-protein
MSNSLAIAAVTTTLRYLLQRRFDSNGSGSVTVTTKPPDKARDNNGNANNQINLFLYQTKENAAWRNMDIPNQVKPGETALPPLALNLYYILTAYAQNDDFPEPTSHNLLGEAMSVFHDYSILKPEDIKNALPAADIAKYDLYNQIEKVKITPQSLSLDELSKMWTTFQTQYRISTAYEVSVVLIESTRPPKTPLPVLSRSSGDTGVTTQANITPPYPTLLSVNFTAIEQARENLPAYQKKLLQKPAANFGDELTLTGYNLEGNNVEIVFNNPQLTAPNVITIPATARTATEIPLTIDTTQPDKWCPGLYTVTAIIEDRSSNGLPLPIAPTIENITFDSRDNSDPNKPNNVIVQVTCSPPVLPAQRVSLVLSTQETALVKIGNSELIARNHPTQTNTLEFELGDIPAGTYQVRPRLRVDGVDSLIINYNVTPLVLPLTFIPEIALVIS
>NZ_AP018255.1|WP_096694166.1|4178398_4179757_-|proton-extrusion-protein-PcxA
MAKNTGSLRHKIIYFWRYAFTWFTDTPERALTDAYKAATVIREIEIEQFNGKKISDDANYSTSVMNYWQVALNNNLNIVKFRLAEFRLSRSLIKLSNHEILEKLKYIDEIVTKYLQDDELFTSSSIVTVENTETTSHTKTTIATPDIISSININNQSQIQRQEVIQPPIKTQKTQDEYVESMRVKPVSQKSGILPRSIGRTFNRLKDDFAPHAEEKYVQNFRVSRRRTQAAVKFIVMLAVIPLITHLLTKQFLVSPIVERTRGENNPHIFMNSSMEDEALEELKIFERGLKFESFILKAPTLTPEEIGEKVKEKAIEIASEFRDKSNNAISNIFADMFSLVAFAVVVATSKREIVILKAFLDDVVYGLSDSAKAFLIIVFTDIFVGFHSPHGWEVLLEGLAEHLGLPPNRSAIFLFIATFPVVLDTIFKYWIFRYLSRLSPSALATLKEMNE
>NZ_AP018255.1|WP_096688124.1|4179948_4180617_-|carbonic-anhydrase
MPIKRIIEGLNEFHDTYFVSHREMFEQLSQGQSPEVLFITCSDSRIDPCLITQSQPGELFVVRNIGNIIPAYGASNSGEGAAIEYAVGALGIKDIVICGHSHCGAMRGLLQIGNLTQQMPLVYDWLKNHAESTRRVVLDNYEGCSSEKLLKIAIEQNVLTQIENLETYPIIRSKLHGGKLTLHAWIYEIETGEVFAYDAGQFKALENRPFPVLNPLICVHGE
>NZ_AP018255.1|WP_096688125.1|4180945_4181509_-|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO
MPKFPPKDYIESISFPSEITLRPIGVVHSPYKERHGTPRQSQLRTVPEDYQPAVAQIELFPDIIPAIALKDMEGFERIWIISWLHLNHHWNPTVILPRGPRVRRGTLATRAPHRPNPIGLSAPKLLKIEGLVLYVEGIDLLDQTPVLDIKPYVPYCDAFNNARSGYVNEMEDAAVHEEDIFGNNGRP
>NZ_AP018255.1|WP_096688126.1|4181898_4182093_-|hypothetical-protein
MTIVTIPKRYLVSLDEESIVLDLPEPVLASLQRDYEKVKKAKGILQHKKEAMLAHLDAVRREWE
>NZ_AP018255.1|WP_096688127.1|4182270_4183407_-|NAD(P)-binding-protein
MGKTKKIIIIGGGIGGAATALALNRAGFHISVYERAQELREVGAGIALWANATHVLNELGLLKDAVNLGCLTTNYQFNTQDGKELVNVSVDKFELPVIGIHRADLHKLLWSNYPGKFVLGQTFERFEQDGSLVRVYMKSGLQDEGDALIGADGLRSQVRAALFGENPPIYRNFTTWRGLTNYIPKAYIPGYIHEFLGRGKGFGFMLLGNNRIYWYAAAKAKEGQGDIKEGRKHELEVMFQDWKDVIPELIAATDEASIIKTDLYGRVPTRPWAKGNITLLGDAAHPMLPTLGQGACTALEDALVISKCLQGECDVVRAFEQYELQRGARVKSIVEQSLRSARMGELENPIAVGLRNQFMKLIESVIADSFKTCHSFRA
>NZ_AP018255.1|WP_096694167.1|4183592_4184240_+|TetR/AcrR-family-transcriptional-regulator
MPRSSKADKSSTKQVRDAEATQAVILAAAEEEFAIHGLTAARTEAIAAKTGVAKSMIYYYFKDKEGLYQAVLERSHVALLHVTQQLDSELEHLAPEAALEKFLVALLECVSQNPKLPTIMFHEAVQNQGKYYKRSSSLNIDKTLMDILDRGVASGAFRQLDSFQAAINIMGTCLFYFIGAGNIQQHPQGRRLLSKAMLEQHIIEAVKFTLAGVKH
>NZ_AP018255.1|WP_096688128.1|4184264_4185485_-|DUF790-family-protein
MLPTDLLIYRQNGEQIIPKRLKIESKSLELATELINCFQAMQGKTQGNLERQLSELEGESTDYRVKRGLAYILKSSFCTFEIISPIDPLFLRERVFACAANSVPSKNQTQATLTYVALELSKELEREVLPEQVKSGLYADLSENRILTAFEEPKPEALIHRYNLSQVQGIFYKASQLIINAHRNNPGEYKLLFRYLKLFQLMAYIEGDSDHGFTITIDGPVSLFNPSTRYGLAIAKLIPAILHVTKWSLAATLKTRDTYNDTWKTGRFALHSADCGLVTHYPPGKPYDSMLEASFADKWDSLKTEWKLEREVDLIPIPGSVMIPDFRLVHPDGRDYLLEIVGYWRPEYLQKKFSQVRRSGCDNLILAISERLNLEKAGVKLNDVPARIVWFKDKLQPKAVLAALDV
>NZ_AP018255.1|WP_096688129.1|4185809_4186112_+|DUF1778-domain-containing-protein
MSDTKISQQTARLEARVNPEIKALWQKAADLQGVTLTDFVISSVQQAAYKVIEQHQTLKLSLEDAEALVEALKQPPMPNDALIAAALRYKKVIQNNGAND
>NZ_AP018255.1|WP_096688130.1|4186095_4186614_+|GNAT-family-N-acetyltransferase
MVLTIELLDSKRHNRSAFFSGNDNLDNYIRKFASQDLKKKVATVFVLIDSPSTDIIAYYTLSSYTLDINDLNETFAKSLPRYPLLPAILLGRLAVDSSRQGQGLGETMLIDAMKRALRTTEQVASVFVIVEAIDEKAVTFYQKYGFQQFKEYPFKLYLPVKEIEELCQRFDV
>NZ_AP018255.1|WP_096688131.1|4186717_4188262_-|DEAD/DEAH-box-helicase
MARTPTLTFDRGTLILHPPPRGRSWMDFATWDDRVEKFRIPAIQYRALVESLQAENTIFNDDAKGFYQVDLVASLEMEPYQHQSEALAAWKLAGRQGVVVLPTAAGKTYLAQMAMQATPRTTLIVVPTLDLMHQWYAHLKAAFPDADIGLLGGGSRDKTPILVATYDSAAIHAETLGSMYALIIFDECHHLPTDFNRVIAEYAIAPYRLGLSATPERTDGKHADLNILIGKEVYRKRAEDLAGKALAEHEIVQIKVKLSQHERERYNQLMQIRNDFLKESKISLGSIQGWQNFVMASARSQAGRKAMLAHREAKDIALGTDGKIRILTDLLSEHYPERILIFTADNNTVYKISNEFLIPAITHQTPVKERHEILTKFKEGEYKSVVASHVLNEGVDVPAARFAIILSGTGSVREYTQRLGRVLRKGQEKNKQAILYEVVTEDTSEEGTSARRRNEPQRTQRTQRKEEKKEEEKGNLKVVYGTGQPKTQRAAEQLGLWNDNSSTISNDSGDNPNF

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Crispr_ID: NZ_AP018255_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_17

5414458-5414867

TypeV

Consensus_repeat	Method
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	PILER-CR
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CRISPRCasFinder
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CRT

5 spacers

cas3,PD-DExK,cas8a4,cas7,cas5,cas6,cas4,cas1

The CRISPR arrays of NZ_AP018255_17

>merge|NZ_AP018255|17|5414458-5414867|PILER-CR,CRISPRCasFinder,CRT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAACACTTAACTACCATTACTTTAGAACCAGCAGATGATAGTCTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAACCAGCAACCTCCCTCGCCACTTCCAAAGGCGCCTTCTCTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAACGATATTTTATAAATTGATATTTCTTACTCGTATTATCTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAACGAACTACCATCCATCTGATAAGGTTTAAATTTATCAGCTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAACCCTGCATCATATGTATCCCACGTCAACCAATTATGCTTGGGCTTGAAACCTTACGAATCCCGTCTTGCAACAAGCCAT

>NZ_AP018255|17|3|5414458-5414789|PILER-CR
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	ACTTAACTACCATTACTTTAGAACCAGCAGATGATAGT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CAGCAACCTCCCTCGCCACTTCCAAAGGCGCCTTCT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	GATATTTTATAAATTGATATTTCTTACTCGTATTAT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	GAACTACCATCCATCTGATAAGGTTTAAATTTATCAG
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC

>NZ_AP018255|17|16|5414458-5414867|CRISPRCasFinder
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	ACTTAACTACCATTACTTTAGAACCAGCAGATGATAGT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CAGCAACCTCCCTCGCCACTTCCAAAGGCGCCTTCT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	GATATTTTATAAATTGATATTTCTTACTCGTATTAT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	GAACTACCATCCATCTGATAAGGTTTAAATTTATCAG
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CCTGCATCATATGTATCCCACGTCAACCAATTATGCTTGGG
CTTGAAACCTTACGAATCCCGTCTTGCAACAAGCCAT

>NZ_AP018255|17|4|5414458-5414867|CRT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	ACTTAACTACCATTACTTTAGAACCAGCAGATGATAGT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CAGCAACCTCCCTCGCCACTTCCAAAGGCGCCTTCT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	GATATTTTATAAATTGATATTTCTTACTCGTATTAT
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	GAACTACCATCCATCTGATAAGGTTTAAATTTATCAG
CTTGAAACCTTACGAATCCCGTCTTCGGGACTGAAAC	CCTGCATCATATGTATCCCACGTCAACCAATTATGCTTGGG
CTTGAAACCTTACGAATCCCGTCTTGCAACAAGCCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689052.1\|5412158_5414207_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP018255.1\|WP_096689046.1\|5405966_5406719_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689048.1\|5409286_5409907_+\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018255.1\|WP_096689050.1\|5410352_5411255_-\|DUF4351-domain-containing-protein	unknown	unknown	gnl\|CDD\|316753
NZ_AP018255.1\|WP_096689053.1\|5415271_5415496_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689060.1\|5421564_5422158_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_AP018255.1\|WP_096689058.1\|5418598_5419543_+\|DevR-family-CRISPR-associated-autoregulator	cas7	pfam01905_cas7_CAS-I	gnl\|CDD\|376656
NZ_AP018255.1\|WP_096689043.1\|5402281_5403085_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689057.1\|5416745_5418515_+\|hypothetical-protein	cas8a4	cls000706_cas8a4_CAS-I-A	unknown
NZ_AP018255.1\|WP_096689049.1\|5409977_5410259_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366652
NZ_AP018255.1\|WP_096689047.1\|5406898_5408686_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_AP018255.1\|WP_096694234.1\|5419771_5420404_+\|hypothetical-protein	cas5	cls000048_cas5_CAS-I-A	unknown
NZ_AP018255.1\|WP_096689061.1\|5422165_5423143_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_AP018255.1\|WP_096689056.1\|5416289_5416511_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP018255.1\|WP_096689051.1\|5411436_5412051_+\|DEAD/DEAH-box-helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_AP018255.1\|WP_096689054.1\|5415645_5415840_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689044.1\|5403163_5403355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689045.1\|5403879_5405946_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224684
NZ_AP018255.1\|WP_096689055.1\|5415897_5416215_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689059.1\|5420381_5421389_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|337605

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689052.1\|5412158_5414207_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	7.48899e-25
NZ_AP018255.1\|WP_096689059.1\|5420381_5421389_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	1.27485e-13
NZ_AP018255.1\|WP_096689060.1\|5421564_5422158_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	4.84041e-33
NZ_AP018255.1\|WP_096689049.1\|5409977_5410259_+\|hypothetical-protein	gnl\|CDD\|366652	pfam01457, Peptidase_M8, Leishmanolysin.	0.00550193
NZ_AP018255.1\|WP_096689061.1\|5422165_5423143_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	3.14951e-147
NZ_AP018255.1\|WP_096689056.1\|5416289_5416511_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.99388e-07
NZ_AP018255.1\|WP_096689058.1\|5418598_5419543_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|376656	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2. This group of families is one of several protein families that are always found associated with prokaryotic CRISPRs, themselves a family of clustered regularly interspaced short palindromic repeats, DNA repeats found in nearly half of all bacterial and archaeal genomes. These DNA repeat regions have a remarkably regular structure: unique sequences of constant size, called spacers, sit between each pair of repeats. It has been shown that the CRISPRs are virus-derived sequences acquired by the host to enable them to resist viral infection. The Cas proteins from the host use the CRISPRs to mediate an antiviral response. After transcription of the CRISPR, a complex of Cas proteins termed Cascade cleaves a CRISPR RNA precursor in each repeat and retains the cleavage products containing the virus-derived sequence. Assisted by the helicase Cas3, these mature CRISPR RNAs then serve as small guide RNAs that enable Cascade to interfere with virus proliferation. Cas5 contains an endonuclease motif, whose inactivation leads to loss of resistance, even in the presence of phage-derived spacers. This family used to be known as DUF73. DevR appears to be negative auto-regulator within the system.	4.51902e-61
NZ_AP018255.1\|WP_096689051.1\|5411436_5412051_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.12442e-23
NZ_AP018255.1\|WP_096689050.1\|5410352_5411255_-\|DUF4351-domain-containing-protein	gnl\|CDD\|316753	pfam14261, DUF4351, Domain of unknown function (DUF4351). This domain is found in bacteria, and is approximately 60 amino acids in length.	2.44898e-24
NZ_AP018255.1\|WP_096689045.1\|5403879_5405946_-\|S9-family-peptidase	gnl\|CDD\|224684	COG1770, PtrB, Protease II [Amino acid transport and metabolism].	0
NZ_AP018255.1\|WP_096689047.1\|5406898_5408686_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0

>NZ_AP018255.1|WP_096689052.1|5412158_5414207_+|CRISPR-associated-helicase-Cas3'
MEIIQLENTDLQQIEANRCRTFRVLSEPLTAQVIWDDIRAHQRQRVIVICNTVSFSQALYKDLEALDNDFKLNITLLHSRFLPEHRAAKESFLKEAFAKNWKLHDTGACEVLISTQVIEAGINITCEVMHVQLCPMNSLLQRAGRCARFSGEQGEVFVYRTVEVNQNYVELAEADIDSEDNQDKKISFLPYPKETCELTWQVLQTHTNSENVHQNVGFRLEEQWINQVHTQEDSLEQKRRQDSRMEFERNFEDAVFKGDEHTAQELIRKVDSRSIFTWDNSIITDFDTETIDPNKLLPFSIPISTLCKALRDFKESLHFGDDWIFKRIEAPQKDKSETYAEPNCTPITSRDFLVSSIRILVNPRYIAYDEHIGLQIGIDVFGNGFESPAKQDKEVTSQYCYKMDNYVGHLVLMWKCWCQPFTTTIIKNSTSEKITYISAREELLTAGGKFIKAKIFPEATQSQTEALFEILVFLAIFTHDLGKLQTKWQQVMRGWQQIAHQQFKKTNPRNHLLAHTDYNPEDKQQQQALKIYERKSKRPNHAVESAFLAQEILKQSLEPLLGAEFNADTEQIKHIYYTVIMATGRHHSAWASGWNNKDIAKLRTIELHPEAQKAIAQSWRSMIKFLPQTLPLSQPNLKRNLYPLKELDLNKFANDEVEYFQLYLLIVRALRLCDQRAVQLLH
>NZ_AP018255.1|WP_096689051.1|5411436_5412051_+|DEAD/DEAH-box-helicase
MDITHLFQTLTTHNPRAFQTQTITRILNHQNTLLRAPTGSGKTETAIAPFLFAKAFDLDFPQKLIYVVPLRTLANSLRQRTEELVQQWAPLHKLPRPIVVTLQTGENPEDPRFEGDIVFCTIDQMLSSFLNIPYSVGRGSANINAGTVFASYLVFDELHLLDPERSFTTVLKVLQQVKGISPFLLMTATLTDELASQIKNIVDV
>NZ_AP018255.1|WP_096689050.1|5410352_5411255_-|DUF4351-domain-containing-protein
MIDHDRLFKELITTFFIEFLELFVPQVLAYTDIFSIEFLDKEIFTDVTEGEEYITDILAKARFSNKDGEFLIHIENQSYKQNKFERRMYYYFALLSQKHALPVYSIAVLSYDNPRTLQSNIYSVDFPDKTVNVFNFEVVQLNQLNWRSFLQKQNPVAAAFMAKMDMAPSDRPIVKFECLRLLSTLRLDKARTKMVSGFVDTYLKLNEAEEQIFQSEIVKLEPVKQEAVMEIVTSWQLQGRQEGKLELVMRLLNRKIGLMAPDVEERIRSLTVTQLEDLAEALLDFTTIEDLVSWLNQLSS
>NZ_AP018255.1|WP_096689049.1|5409977_5410259_+|hypothetical-protein
MDTIVYPGYICLVLRLKNRWHNLCGETFYNPYNFPIYKLEDLFLFLGLTMKEVANELRKINNAAPVITSADIVERKYYYCGTEWDDVKRTLRE
>NZ_AP018255.1|WP_096689048.1|5409286_5409907_+|hypothetical-protein
MAFSSYKTISRVLKEYQVSYVESNFMGEAEFKVSDYFRDDLETVMREGVVNNSEYAICENLIYPVLKEVWKHYSRKFTLWSHEFLDYNEKLSGYPEYIIAKRSSLGKVVFDKPYFILIEAKQDDFEGGWAQCLAEMIAAQRLNGEFNITLFGIVSNGATWEFGKLEANRFTKNITPYTIYELDRLFAAVNYVFQQSESQLDNLLVA
>NZ_AP018255.1|WP_096689047.1|5406898_5408686_+|aspartate--tRNA-ligase
MRTHYCGELRSEHIGKTVTLYGWIDRRRDHGGVIFLDLRDRDGIVQIVSDPQRTPNSYDAANALRSEYVVEIVGRVTQRPDESLNERIPTGEVEIYADKITLLNAVRKQLPFQVSSADTDPVREEVRLRYRYLDLRRERMANNIKLRHQVVKAMRRYLEDCEGFIEVETPVLTRSTPEGARDYILPSRVNAGEWFALPQSPQLFKQILMVSGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQPEIIKLNEKLVGHIFKTVKGIDLQHPFPQITYAEAMDKYGSDKPDTRYDLELVNVSDILKDSGFKVFNEAIKNGGIVKILPIANGNDAISNVRIKPGGDIFREASEAGAKGLAYIRVRDNGEIDTIGAIKDNLTEEQKQEILNRTGAKPGHLLLFGAGDAPTVNKTLDRLRQFFAREFNLIDPEKINLLWVVDFPMFEWNADQKRLEALHHPFTAPHPDDINDLKTARAQAYDLVLNGFEVGGGSLRIYQRDIQEQVFEAIGLSPEEAQGKFGFLLEAFEYGTPPHGGIAFGVDRMVMLLASEESIRDVIAFPKTQQARCLLTEAPSSVDAKQLKELHVASTYKPKQ
>NZ_AP018255.1|WP_096689046.1|5405966_5406719_-|hypothetical-protein
MQTDPNNPPQPDITPTDTHPQHSLLIPRDRRRKFFWTYVLMTIVGWVVGGIASIAIEKTINEQFIVKATPEVQTLWYTWGTYVSLTIFALIFGADQAIVVRRYISGWWWLLATSFGWLAAIKVSNVWREYIETFGASLNRDLTPEEIIILTIASTTAFIFSAIWISFFQWIVLRRYTKQSWWWNFINSLAFALISFLVWLLSLAQDSIPEVYRDLVLYLCEQGLTALIIGIIPAIGFCRLFARGTQAVKE
>NZ_AP018255.1|WP_096689045.1|5403879_5405946_-|S9-family-peptidase
MHDNMTQNQSTPPVAQKQPHVLELHGDRRIDNYFWMRDIENPQVTAYLEAENAYTEEAMKSTTDLQQQLYNEILSRIKETDLSVPVRKDNYYYYSRTEVGKAYAIHCRKQGSLEAPEEILLDENELADGQEYFSLGVFQVSPNHEILAYAVDNNGSERYTIYFLDLKTFKLYPETISETYYSFAWANDNQTVFYTQVDEANRPFKLFRHQLGKSQQEDTLIHYEPDDSYFLSVGKTRSNAYIVMSLGSQVTSEAHFIDANNPLKGAFQVVEARVQGVEYEIDHHGDYFYIVTNDKAINFKLMKTPVASTSKQNWETVIPHREDVMLSGISLFAKHLVIYERVNGLPCATVQNLDTNKSHNITFPEPTYGFFEGINPEFNTNILRFTYTSLITPPSVFEYDMETNARELKKETEVLGGYDKAQYESEMLTATAKDGTKIPISIVYKKGIAKNGQNPLFLTGYGSYGYPYPATFASNRLPLLERGFVFAIAHIRGGGEFGRKWYESGKFLNKKNTFTDFISCAEYLINQKWTSPQHLAISGGSAGGLLMGAVINMRPDLFKVVVADVPFVDVVTTIADTSLPLSAIEWDEWGNPNDKVYYEYMKSYSPYDNVEAKQYPHLLITAGLNDPRVKYWEPAKWTAKLRELKTDDNILLLKTNMGAGHGGASGRYESLKELAFEYAFVLTWLKNN
>NZ_AP018255.1|WP_096689044.1|5403163_5403355_-|hypothetical-protein
MVITEIKSNFNHILNSTACSIFEHKHKKLFINHKVIKNLTVTKALQEIADKGYSIKQIRWNFM
>NZ_AP018255.1|WP_096689043.1|5402281_5403085_-|hypothetical-protein
MLIFNTYPLPPKVDIPHTILLVDTQKLENVKVQNITQKPANTRISQGREIIDDSQLQSLKRQLFNQVNASWVERKTLSSDLVYKVAISANGEVISYEPLNQIARAQIAKTPLSNLISNPNTSVSTQNQPFGSFRVVFRKSGVLEISPWRGFRKTPDVVGNKITNPRLLRKLQRQLTTTLRQNWEGKTTAKQDLKYRVAVNKNGVVADYEPINQVAYDHFRETPLPLIFQELHGSNIAAPKDKEPLAHFRVVFKRNGSLDITPWRKLR
>NZ_AP018255.1|WP_096689053.1|5415271_5415496_-|hypothetical-protein
MPNPRPKQTQAFIEQQNKGYIEDWINEPLAKQVTGLRLPQSVHDTLHALVPEERVKYLRRIICEAVKRDLTPNS
>NZ_AP018255.1|WP_096689054.1|5415645_5415840_+|hypothetical-protein
MTENGNGNGRRRLFDPVLVFIKLILGWERRNQVSREENIVNIDEVLDDLDDRLDEPDNPSETEN
>NZ_AP018255.1|WP_096689055.1|5415897_5416215_+|hypothetical-protein
MDTIVYPTYIRLIVRTSNCWRFVKGERFYNPYNFPALDQENLFRFLGLTMKQVANELRKINNAAPGYYLADIVERKYYYCGTEWDDVKRTLRQELGIGRLDPLVE
>NZ_AP018255.1|WP_096689056.1|5416289_5416511_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNNFKYKMIIQWSDEDNCFLVGFPDFSRQRWRTHGDTYEEAVANGTEALEPLIMAYEATGETLPEPSTYKIAV
>NZ_AP018255.1|WP_096689057.1|5416745_5418515_+|hypothetical-protein
MLRLFISKNYGNYADTFLMLGLARVVEYALKVTNQKSGIQLIDEGTRYCIQFKKSVNLEPIAKITYTSPFPVVKGQKTDISKIPEEANIFNTVEHNEIRKVYREFMFQRGKRTEESPQPPDYRTQNGAILTSMRHDRNHNDLWLVGWELRDYFGALIVALCQGFSQENTTTELVAELFKASTGCKLPDASAVKVYLPTSVQGVNRVKADSNKVDSQKTDWLSLWLIANGLFNFAVAERVKIAERVYDWRLVALQPQDISLSKYDDVLKQLLIHNLPGGGHGAARFDAELVIRFCQELLNHHRAANEQDDWDKPVNHFVSNFAGTHFGAKGQVYGVKEVFSLGLPAWVYPRNYNELLDYQNVLDEHLNVVRALSLDEGHSELIAAYRDFITGNDLYQFFRFQVSYADYITKMAGANARVALFSKQGLNLMLKNLNNKYRQDDREWSLTEITQDSGFLNIAKAINSATVYAGTIRDKDNQSKDTGWERIYGLAQRLISQSGSKKDFIIEIMSFLASYENENLRIDDELRKLKKPRRIWTTKDDLDRLINLIDNHGSSLVANLLIAYGYAKGWGKAKDEKEQTEESLVECVN
>NZ_AP018255.1|WP_096689058.1|5418598_5419543_+|DevR-family-CRISPR-associated-autoregulator
MKNTNFLAYSISISGLLSWQLHALNNEGNEGNQSLTRRFYIIQKGMSEPEYVNGVSGDMLKHIQAEHLHRIAIEEGLSLSEGGKLFNPDRIGYDIEKNLPIFTDKDAGLGAKTHKVLQRCTMSDLEGFMVTVKGGQTLKRESAIEFGAIVGLPTLVKTQSYFHAKYGVENPTPYNVQVSSGLYATVLNIEAFRIGYNPHNFSYSIDGAERKKRLDALLKSVLYTYMQPNGAKRNTNLPHPDYFEGVITVSTRRCPAPMLSPLETDYHRQIYSLADTLNNLNGADTICCFDFESMAQFAEKIQTIIALAQPWESE
>NZ_AP018255.1|WP_096694234.1|5419771_5420404_+|hypothetical-protein
MAVRSNLIPTPYAIKMALLKVLLESQGKHHENDFDLWIKHQFIWIRDLHIYVMPPEQLVVNRNGYKLRYYDQTADKADKSRTTIPMQDGFVFREWIHLQGDLQICCGKTTRLDELTQLFAQINYFGKRGCFFQFLPGATQETSEPMFTSDPSTSFTIQPMDDLGKKTTFNRINPFSNEKAQLHKDRIIEPGYLPLQLRATGARYDFYQRY
>NZ_AP018255.1|WP_096689059.1|5420381_5421389_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTSTKDTSTHFAGLSVVLRPTQTVCDATPLTSWLPNELFPAWIPQRYIDGVTKIMPVLPQPALYESLMQCIIGQIGSNNLVEWRQKPYELTGVEVNNNSLHSIQVSINPVSPLPPTIARAVHALCFHWFAKTDPTLAQTLHEQENLPMTTGIEYCSAKKILLKINLLQKELLAPLLWGMSSDLGNEISIAGIPCRLNTWVDVVQASSYEKLMQVPAQNFIQLEFLTPTSFKQGKYIQPFPLLELVFNGLLRRWNKFAPENLHFPQVEWNGLVSAYELKTHAMKMEGGGEIGAEGRVKYRFASSEQAKIATVLAHFACFAGVGRKTTMGMGQTRIS
>NZ_AP018255.1|WP_096689060.1|5421564_5422158_+|CRISPR-associated-protein-Cas4
MIENYLPLAYLNAWEYCARRFYLEYVLGEMEDNEHIILGRHIHRNINEESILTEGDTVIRQQQWVWSDQLKVAGIIDAVEECNGQLVPVEYKKGKMAQHLNDHFQLCAAAICIEERTGRSIPYGDIFYHANRRRETVAFTPQLRQATEQAILLAQNAATGAMPSPINNTKKCQSCSLQRICLPFEVKALRAHNQSQI
>NZ_AP018255.1|WP_096689061.1|5422165_5423143_+|type-I-D-CRISPR-associated-endonuclease-Cas1
MTVLYVTQPEAVLSKNYEAFTVALKQEDGTWSKKSIPAQTVEQVVLMGNPQVTGDALVYALELGMPIHYLSPFGKYLGSALPGHSRNGQLRLAQYQVYNDAVRRLELVKAIVTAKIHNQYLILYRHNERNNPLKQRKNQVQSQQNIDQVRGIEGLAAREYFACWDRMVGKQWTFTGRNRRPPTDPVNSLLSFAYGLLRVQVTAGVHLAGLDPYIGYLHEVHHGQPSMVLDLMEEFRPLIADSVVLGILRQGEIKPNDFTESLGAYQLSESGRKCFLEAFERKMNDEFKHAVFDYRCTYRRAVELQARLLSRHLQEGTPYKPLILR

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Crispr_ID: NZ_AP018255_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_18

5423750-5424947

Unclear

Consensus_repeat	Method
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	PILER-CR
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CRISPRCasFinder
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CRT

16 spacers

cas2,cas1,cas4,cas6,cas5,cas7,cas8a4

The CRISPR arrays of NZ_AP018255_18

>merge|NZ_AP018255|18|5423750-5424947|PILER-CR,CRISPRCasFinder,CRT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACTTCTATTGCGGTGCAAGCCGCATTGACGACACTTACCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACTCCCCAAAAATATCCTGCACCAATTTTAACAGTGGACTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACCCCACGTGCCTTGTTCATCAAGCTTGTCTCCACCTTCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACATCAAACGATGCAAGGAAAAACACTATCGATAAAACTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACATAACACTTAACTTTTAGGCAACTATACTATCACATGGCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACGTACTTACGCATCTGGCCCGCCAAAACTTACAGTCACTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACAGATTACAAGCTAGTGCAGGTGGAGTAATCGCGCACTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACTCATCTACTAATACCCAATCACTAGACTTATCTAGCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACGTTTTGATTGGCAACCGATTGATAATACTAAACCTGCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACTCTAACTGAAGGTCAAACTTAGTAAGAGGTTCCAACTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACATACAAAGCCCGATTAACCACTATTATCATCGTGGCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACGTTTCCCAGCTTCTACATCGCCCCTAGACGCTCGCCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACCGTATTTTAACCTTGCAAAGCGGAACTGTAATTGGCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACCTTCCAAACAGATAATTCCATATACCGATGCCATTTCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACCTGATTGCCGATAGCCCAATCATCAAAAGCAAATAACTTTAAACTTTACGAATCCCGTTATCGGGACTGAAACTGTTATCTGTAGTTTACAAAGTACGGCTCTGCACCTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC

>NZ_AP018255|18|4|5423750-5424947|PILER-CR
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TTCTATTGCGGTGCAAGCCGCATTGACGACACTTAC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCCCCAAAAATATCCTGCACCAATTTTAACAGTGGA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CCCACGTGCCTTGTTCATCAAGCTTGTCTCCACCTT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATCAAACGATGCAAGGAAAAACACTATCGATAAAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATAACACTTAACTTTTAGGCAACTATACTATCACATGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTACTTACGCATCTGGCCCGCCAAAACTTACAGTCA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	AGATTACAAGCTAGTGCAGGTGGAGTAATCGCGCA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCATCTACTAATACCCAATCACTAGACTTATCTAG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTTTTGATTGGCAACCGATTGATAATACTAAACCTG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCTAACTGAAGGTCAAACTTAGTAAGAGGTTCCAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATACAAAGCCCGATTAACCACTATTATCATCGTGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTTTCCCAGCTTCTACATCGCCCCTAGACGCTCGC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CGTATTTTAACCTTGCAAAGCGGAACTGTAATTGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CTTCCAAACAGATAATTCCATATACCGATGCCATTT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CTGATTGCCGATAGCCCAATCATCAAAAGCAAATAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TGTTATCTGTAGTTTACAAAGTACGGCTCTGCAC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC

>NZ_AP018255|18|17|5423750-5424947|CRISPRCasFinder
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TTCTATTGCGGTGCAAGCCGCATTGACGACACTTAC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCCCCAAAAATATCCTGCACCAATTTTAACAGTGGA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CCCACGTGCCTTGTTCATCAAGCTTGTCTCCACCTT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATCAAACGATGCAAGGAAAAACACTATCGATAAAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATAACACTTAACTTTTAGGCAACTATACTATCACATGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTACTTACGCATCTGGCCCGCCAAAACTTACAGTCA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	AGATTACAAGCTAGTGCAGGTGGAGTAATCGCGCA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCATCTACTAATACCCAATCACTAGACTTATCTAG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTTTTGATTGGCAACCGATTGATAATACTAAACCTG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCTAACTGAAGGTCAAACTTAGTAAGAGGTTCCAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATACAAAGCCCGATTAACCACTATTATCATCGTGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTTTCCCAGCTTCTACATCGCCCCTAGACGCTCGC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CGTATTTTAACCTTGCAAAGCGGAACTGTAATTGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CTTCCAAACAGATAATTCCATATACCGATGCCATTT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CTGATTGCCGATAGCCCAATCATCAAAAGCAAATAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TGTTATCTGTAGTTTACAAAGTACGGCTCTGCAC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC

>NZ_AP018255|18|5|5423750-5424947|CRT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TTCTATTGCGGTGCAAGCCGCATTGACGACACTTAC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCCCCAAAAATATCCTGCACCAATTTTAACAGTGGA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CCCACGTGCCTTGTTCATCAAGCTTGTCTCCACCTT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATCAAACGATGCAAGGAAAAACACTATCGATAAAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATAACACTTAACTTTTAGGCAACTATACTATCACATGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTACTTACGCATCTGGCCCGCCAAAACTTACAGTCA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	AGATTACAAGCTAGTGCAGGTGGAGTAATCGCGCA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCATCTACTAATACCCAATCACTAGACTTATCTAG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTTTTGATTGGCAACCGATTGATAATACTAAACCTG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TCTAACTGAAGGTCAAACTTAGTAAGAGGTTCCAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	ATACAAAGCCCGATTAACCACTATTATCATCGTGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	GTTTCCCAGCTTCTACATCGCCCCTAGACGCTCGC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CGTATTTTAACCTTGCAAAGCGGAACTGTAATTGG
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CTTCCAAACAGATAATTCCATATACCGATGCCATTT
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	CTGATTGCCGATAGCCCAATCATCAAAAGCAAATAA
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC	TGTTATCTGTAGTTTACAAAGTACGGCTCTGCAC
CTTTAAACTTTACGAATCCCGTTATCGGGACTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689065.1\|5426457_5427420_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381326
NZ_AP018255.1\|WP_096689068.1\|5428102_5428531_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_AP018255.1\|WP_096689064.1\|5425890_5426271_+\|DUF2809-domain-containing-protein	unknown	unknown	gnl\|CDD\|378530
NZ_AP018255.1\|WP_096689063.1\|5425232_5425661_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_AP018255.1\|WP_096689069.1\|5428849_5429848_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_AP018255.1\|WP_096689058.1\|5418598_5419543_+\|DevR-family-CRISPR-associated-autoregulator	cas7	pfam01905_cas7_CAS-I	gnl\|CDD\|376656
NZ_AP018255.1\|WP_096689057.1\|5416745_5418515_+\|hypothetical-protein	cas8a4	cls000706_cas8a4_CAS-I-A	unknown
NZ_AP018255.1\|WP_096689067.1\|5427872_5428106_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689071.1\|5432319_5433036_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239267
NZ_AP018255.1\|WP_096694234.1\|5419771_5420404_+\|hypothetical-protein	cas5	cls000048_cas5_CAS-I-A	unknown
NZ_AP018255.1\|WP_096689066.1\|5427547_5427832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689072.1\|5433138_5433429_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_AP018255.1\|WP_096689062.1\|5423235_5423529_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP018255.1\|WP_096689060.1\|5421564_5422158_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_AP018255.1\|WP_096689054.1\|5415645_5415840_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689070.1\|5430078_5432199_+\|thiol:disulfide-interchange-protein	unknown	unknown	gnl\|CDD\|226685
NZ_AP018255.1\|WP_096689061.1\|5422165_5423143_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274976
NZ_AP018255.1\|WP_096689055.1\|5415897_5416215_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689059.1\|5420381_5421389_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|337605
NZ_AP018255.1\|WP_096689056.1\|5416289_5416511_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689065.1\|5426457_5427420_+\|aldo/keto-reductase	gnl\|CDD\|381326	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	1.69547e-95
NZ_AP018255.1\|WP_096689068.1\|5428102_5428531_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	2.60953e-30
NZ_AP018255.1\|WP_096689063.1\|5425232_5425661_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	5.72964e-31
NZ_AP018255.1\|WP_096689069.1\|5428849_5429848_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	3.3161e-176
NZ_AP018255.1\|WP_096689058.1\|5418598_5419543_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|376656	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2. This group of families is one of several protein families that are always found associated with prokaryotic CRISPRs, themselves a family of clustered regularly interspaced short palindromic repeats, DNA repeats found in nearly half of all bacterial and archaeal genomes. These DNA repeat regions have a remarkably regular structure: unique sequences of constant size, called spacers, sit between each pair of repeats. It has been shown that the CRISPRs are virus-derived sequences acquired by the host to enable them to resist viral infection. The Cas proteins from the host use the CRISPRs to mediate an antiviral response. After transcription of the CRISPR, a complex of Cas proteins termed Cascade cleaves a CRISPR RNA precursor in each repeat and retains the cleavage products containing the virus-derived sequence. Assisted by the helicase Cas3, these mature CRISPR RNAs then serve as small guide RNAs that enable Cascade to interfere with virus proliferation. Cas5 contains an endonuclease motif, whose inactivation leads to loss of resistance, even in the presence of phage-derived spacers. This family used to be known as DUF73. DevR appears to be negative auto-regulator within the system.	4.51902e-61
NZ_AP018255.1\|WP_096689072.1\|5433138_5433429_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	1.22801e-34
NZ_AP018255.1\|WP_096689071.1\|5432319_5433036_+\|redoxin-domain-containing-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	4.67452e-59
NZ_AP018255.1\|WP_096689062.1\|5423235_5423529_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.85605e-28
NZ_AP018255.1\|WP_096689060.1\|5421564_5422158_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	4.84041e-33
NZ_AP018255.1\|WP_096689061.1\|5422165_5423143_+\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	3.14951e-147
NZ_AP018255.1\|WP_096689070.1\|5430078_5432199_+\|thiol:disulfide-interchange-protein	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	1.48064e-93
NZ_AP018255.1\|WP_096689064.1\|5425890_5426271_+\|DUF2809-domain-containing-protein	gnl\|CDD\|378530	pfam10990, DUF2809, Protein of unknown function (DUF2809). Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.	2.25073e-27
NZ_AP018255.1\|WP_096689059.1\|5420381_5421389_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	1.27485e-13
NZ_AP018255.1\|WP_096689056.1\|5416289_5416511_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.99388e-07

>NZ_AP018255.1|WP_096689062.1|5423235_5423529_+|CRISPR-associated-endonuclease-Cas2
MTTLFYLIIYDLPDNKAANRRRTRLHKMLTGYGTWTQYSVFECFLTAVKFTQLQIKVEKLIKPDEDSVRVYVLDAGSVKRTITYGSEKPRQEQVIVL
>NZ_AP018255.1|WP_096689061.1|5422165_5423143_+|type-I-D-CRISPR-associated-endonuclease-Cas1
MTVLYVTQPEAVLSKNYEAFTVALKQEDGTWSKKSIPAQTVEQVVLMGNPQVTGDALVYALELGMPIHYLSPFGKYLGSALPGHSRNGQLRLAQYQVYNDAVRRLELVKAIVTAKIHNQYLILYRHNERNNPLKQRKNQVQSQQNIDQVRGIEGLAAREYFACWDRMVGKQWTFTGRNRRPPTDPVNSLLSFAYGLLRVQVTAGVHLAGLDPYIGYLHEVHHGQPSMVLDLMEEFRPLIADSVVLGILRQGEIKPNDFTESLGAYQLSESGRKCFLEAFERKMNDEFKHAVFDYRCTYRRAVELQARLLSRHLQEGTPYKPLILR
>NZ_AP018255.1|WP_096689060.1|5421564_5422158_+|CRISPR-associated-protein-Cas4
MIENYLPLAYLNAWEYCARRFYLEYVLGEMEDNEHIILGRHIHRNINEESILTEGDTVIRQQQWVWSDQLKVAGIIDAVEECNGQLVPVEYKKGKMAQHLNDHFQLCAAAICIEERTGRSIPYGDIFYHANRRRETVAFTPQLRQATEQAILLAQNAATGAMPSPINNTKKCQSCSLQRICLPFEVKALRAHNQSQI
>NZ_AP018255.1|WP_096689059.1|5420381_5421389_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTSTKDTSTHFAGLSVVLRPTQTVCDATPLTSWLPNELFPAWIPQRYIDGVTKIMPVLPQPALYESLMQCIIGQIGSNNLVEWRQKPYELTGVEVNNNSLHSIQVSINPVSPLPPTIARAVHALCFHWFAKTDPTLAQTLHEQENLPMTTGIEYCSAKKILLKINLLQKELLAPLLWGMSSDLGNEISIAGIPCRLNTWVDVVQASSYEKLMQVPAQNFIQLEFLTPTSFKQGKYIQPFPLLELVFNGLLRRWNKFAPENLHFPQVEWNGLVSAYELKTHAMKMEGGGEIGAEGRVKYRFASSEQAKIATVLAHFACFAGVGRKTTMGMGQTRIS
>NZ_AP018255.1|WP_096694234.1|5419771_5420404_+|hypothetical-protein
MAVRSNLIPTPYAIKMALLKVLLESQGKHHENDFDLWIKHQFIWIRDLHIYVMPPEQLVVNRNGYKLRYYDQTADKADKSRTTIPMQDGFVFREWIHLQGDLQICCGKTTRLDELTQLFAQINYFGKRGCFFQFLPGATQETSEPMFTSDPSTSFTIQPMDDLGKKTTFNRINPFSNEKAQLHKDRIIEPGYLPLQLRATGARYDFYQRY
>NZ_AP018255.1|WP_096689058.1|5418598_5419543_+|DevR-family-CRISPR-associated-autoregulator
MKNTNFLAYSISISGLLSWQLHALNNEGNEGNQSLTRRFYIIQKGMSEPEYVNGVSGDMLKHIQAEHLHRIAIEEGLSLSEGGKLFNPDRIGYDIEKNLPIFTDKDAGLGAKTHKVLQRCTMSDLEGFMVTVKGGQTLKRESAIEFGAIVGLPTLVKTQSYFHAKYGVENPTPYNVQVSSGLYATVLNIEAFRIGYNPHNFSYSIDGAERKKRLDALLKSVLYTYMQPNGAKRNTNLPHPDYFEGVITVSTRRCPAPMLSPLETDYHRQIYSLADTLNNLNGADTICCFDFESMAQFAEKIQTIIALAQPWESE
>NZ_AP018255.1|WP_096689057.1|5416745_5418515_+|hypothetical-protein
MLRLFISKNYGNYADTFLMLGLARVVEYALKVTNQKSGIQLIDEGTRYCIQFKKSVNLEPIAKITYTSPFPVVKGQKTDISKIPEEANIFNTVEHNEIRKVYREFMFQRGKRTEESPQPPDYRTQNGAILTSMRHDRNHNDLWLVGWELRDYFGALIVALCQGFSQENTTTELVAELFKASTGCKLPDASAVKVYLPTSVQGVNRVKADSNKVDSQKTDWLSLWLIANGLFNFAVAERVKIAERVYDWRLVALQPQDISLSKYDDVLKQLLIHNLPGGGHGAARFDAELVIRFCQELLNHHRAANEQDDWDKPVNHFVSNFAGTHFGAKGQVYGVKEVFSLGLPAWVYPRNYNELLDYQNVLDEHLNVVRALSLDEGHSELIAAYRDFITGNDLYQFFRFQVSYADYITKMAGANARVALFSKQGLNLMLKNLNNKYRQDDREWSLTEITQDSGFLNIAKAINSATVYAGTIRDKDNQSKDTGWERIYGLAQRLISQSGSKKDFIIEIMSFLASYENENLRIDDELRKLKKPRRIWTTKDDLDRLINLIDNHGSSLVANLLIAYGYAKGWGKAKDEKEQTEESLVECVN
>NZ_AP018255.1|WP_096689056.1|5416289_5416511_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNNFKYKMIIQWSDEDNCFLVGFPDFSRQRWRTHGDTYEEAVANGTEALEPLIMAYEATGETLPEPSTYKIAV
>NZ_AP018255.1|WP_096689055.1|5415897_5416215_+|hypothetical-protein
MDTIVYPTYIRLIVRTSNCWRFVKGERFYNPYNFPALDQENLFRFLGLTMKQVANELRKINNAAPGYYLADIVERKYYYCGTEWDDVKRTLRQELGIGRLDPLVE
>NZ_AP018255.1|WP_096689054.1|5415645_5415840_+|hypothetical-protein
MTENGNGNGRRRLFDPVLVFIKLILGWERRNQVSREENIVNIDEVLDDLDDRLDEPDNPSETEN
>NZ_AP018255.1|WP_096689063.1|5425232_5425661_+|Hsp20/alpha-crystallin-family-protein
MLLCYNPWNEMNAITSQLDSLFQELQAPTFRTPVAELHETSEAVHLKLELPGIEAKDVDIEVTKNAVKVVAERKTETLTDENGKVRSEFYYGKFQRVIPLRACIQNTAVTAEYKDGILNLTLPKSEPEKNKVVKVNLGEVSA
>NZ_AP018255.1|WP_096689064.1|5425890_5426271_+|DUF2809-domain-containing-protein
MFKFKKTYFYLTLALFLIEVCIAIFINDIFIRPFIGDVLVVILIYCFIRAFFNIQSSITAVSVFTFACMIEILQYFNFVDKLGLRDNRILAIALGSTFDWKDIIAYAIGAITVFLLENKTNWSNPQ
>NZ_AP018255.1|WP_096689065.1|5426457_5427420_+|aldo/keto-reductase
MPGSTSNSEMLYRELGSTGERVSAIGLGGYHIGLKHVDEELGIRIVRTAIDRGITFMDNSWDYNGGVSEICMGKALRDGYRDKVFLMTKIDGRSKVEATRQIDESLQRLQVECIDLVQHHEILRFEDPHRVFDEEGANAALIEARQAGKLRYIGFTGHKDPSIHLHMLQVAAEQGFKFDAVQMPLNVMDAHYRSFTKLVVPELVKQNIGILGMKSMANGILLRSNTVTPIECLHYVLNLPTSVVITGIDSMEILDQAFAAVQSFQPMNEQQVNSLLAKTSEAGKRGEYEPFKTSSIFDSTAQNPDWLGKEPQRLQQLMPA
>NZ_AP018255.1|WP_096689066.1|5427547_5427832_-|hypothetical-protein
MSHEKTFTRAEIDSAIEYLLSLDFNRPLDREIEGRMLFIRQASTENVSITVLILSNNSIRYDVSSSGGDEDYPVETGEINSLEQLRVKVAEVIG
>NZ_AP018255.1|WP_096689067.1|5427872_5428106_+|hypothetical-protein
MKSVRATLISPANSNSSSPTLLQILAKQKQQWIIGAVVALLGLGGIWYFQSQPKVDTAFSRAPSAIENSKKCIIEMF
>NZ_AP018255.1|WP_096689068.1|5428102_5428531_+|Hsp20/alpha-crystallin-family-protein
MIFIDNPWNEMNAVTRQLDSLFQELQAPTFSTPAAELHETESAVHLKLELPGVEAKDVDIEVTENAVKVVAERKTETKTEENGKVRSEFYYGKFQRVIPLRARIQNTAVTAEYKDGILNLTLPKSEAEKNKVVKVNLGEVSA
>NZ_AP018255.1|WP_096689069.1|5428849_5429848_-|glutathione-S-transferase-family-protein
MGLGILKDGKWIPERDQEDTEGKFIRPSTTFRDKITADGSSGFKAEPGRYHLYISWACPWACRTAILRELKGLQDIISMSVVGAEIKENSWEFTDEPGSIPDTVNNAQYLWQIYLKADPNYSGRVTVPVLWDKQTNTIVNNESREIIRMLDTEFNECNSSGGRRDVDFYPQQLQDKINETIDKIYQPINNGVYRAGFATSQAAYDEAVTELFTALEHWEKVLETQRYLCGDQITEADWCMFTTLFRFDAVYYVHFKCNINRIIDYPNLWNYLKELYQYPGVKATCNLDHIKRHYYKSHPKVNPTRIVPKGPNIDFEAPHNRDSLLEKNGVKV
>NZ_AP018255.1|WP_096689070.1|5430078_5432199_+|thiol:disulfide-interchange-protein
MWYQQRAGLRFVQIFIVLIVTVLLSVFTFLQGAPAWANPVKTPNVRIQLISEVSNVQPQTPFWVGFNFKIRPGWHTYWRNPGDSGAAFKVNWKLPNGFTVSDIVYPYPEKFPVGPLMNYGYKNEVTLLSQITPAKIATNSPVEIQASAEWLVCEKECIPEEASLSLKLPVTTGAANTNTTWAKTFEATRRNIPKPSPWKAQASINGETLTLQLQAPQLKNNQIQEVSFFPDEDGWINNAAPQKVSFNDGLILQLQRGNRSDVNKVSGVLVVREKLDIPVNQAFNIQAPVGTQPLQTQASTSIPQVLLLAFLGGIVLNLMPCVFPVLSIKALGIARKSQASTQEVRLQALFFMAGVLVSFGAVAGTLLVLRSLGEQIGWGFQLQSPVFVTLMAYLMFAVGLSLSGVFIFGAALMGVGQSLVSRSGYLGEFFTGVFATLIATPCTAPFMATAIGIALTQPPLIAIAIFEVLGFGLALPYVVICFTPGLQRILPKPGAWMETLSQVLAFPMYAATAWLVWILTLQAGTNGLAAALAGLVLIAFAAWFHQKTRLAKVFWQRLGTVGALVVVGFALTLAQIPNNTTNAVVNNQQQNSLINWQPYSLVRLTELRQAKKPVFVNFSAAWCVSCLVNEQVALNQPDTVAAFKSKGVTLLKADWTNRNPEITKALESFGRSGVPLYVLYSATNDQPIILPQSLSVSEVVNTLQRI
>NZ_AP018255.1|WP_096689071.1|5432319_5433036_+|redoxin-domain-containing-protein
MNKHLLNWKKLVIAGITTLAIASTAGCDSSNSANQNNANQTAPQQESSPVSQSTETNAVRVGAPAPAFTAVDSNGKTHNLSDFKGKTVVLEWTNHECPFVKKHYESGNMQALQKEKTGKGVVWLSVISSAPGQQGNVTPQKASELTKSRNASPTAVLIDADGKVGKLYQARTTPHMYVIDKNGILQYTGAIDDNSSKNPQDAKTANNYVRAAVDSVLKGEPVKTSTTQPYGCSVKYAT
>NZ_AP018255.1|WP_096689072.1|5433138_5433429_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MIDRELVHKVALLARLELTPEEEEQFTTQLGSILEYVDQLGELDVTDVPPTTRAIDVSNVVRADNLQPYPEREAILSGAPATEGEFFKVPKILNPE

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Crispr_ID: NZ_AP018255_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_19

5554286-5554429

Orphan

Consensus_repeat	Method
TATTATCATGATTTTTTTCAGGTTGTGAAAGATATAAATTGCCACTATCATTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_19

>merge|NZ_AP018255|19|5554286-5554429|CRISPRCasFinder
TATTATCATGATTTTTTTCAGGTTGTGAAAGATATAAATTGCCACTATCATTAAAAAGTAAAGTTTTCATAATATCATCATTACCATTTATATTATCATGATTTTTTTCAGGTTTTGAAAGATATAAATTGCCACTATCATTAA

>NZ_AP018255|19|18|5554286-5554429|CRISPRCasFinder
TATTATCATGATTTTTTTCAGGTTGTGAAAGATATAAATTGCCACTATCATTAA	AAAGTAAAGTTTTCATAATATCATCATTACCATTTA
TATTATCATGATTTTTTTCAGGTTTTGAAAGATATAAATTGCCACTATCATTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689159.1\|5548331_5549225_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379062
NZ_AP018255.1\|WP_096689166.1\|5561875_5562250_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689172.1\|5568684_5569395_-\|rubrerythrin-family-protein	unknown	unknown	gnl\|CDD\|224508
NZ_AP018255.1\|WP_096689152.1\|5532337_5533912_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277324
NZ_AP018255.1\|WP_096689169.1\|5566417_5566945_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018255.1\|WP_096689165.1\|5560025_5561762_+\|transposase	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689155.1\|5542391_5543306_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|178283
NZ_AP018255.1\|WP_096689170.1\|5567161_5567536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689154.1\|5540699_5542298_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689167.1\|5562286_5565694_+\|response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_AP018255.1\|WP_096689164.1\|5558541_5559573_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689168.1\|5565734_5566217_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380364
NZ_AP018255.1\|WP_096689158.1\|5547567_5548008_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NZ_AP018255.1\|WP_096689171.1\|5568028_5568295_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689157.1\|5544519_5547546_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|367401
NZ_AP018255.1\|WP_096689163.1\|5556845_5558426_-\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|368582
NZ_AP018255.1\|WP_096689160.1\|5549227_5551447_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096689156.1\|5543792_5544326_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_AP018255.1\|WP_096689161.1\|5551443_5553789_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096689153.1\|5534015_5534963_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378342

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689159.1\|5548331_5549225_-\|AAA-family-ATPase	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	8.78027e-05
NZ_AP018255.1\|WP_096689172.1\|5568684_5569395_-\|rubrerythrin-family-protein	gnl\|CDD\|224508	COG1592, COG1592, Rubrerythrin [Energy production and conversion].	2.70081e-41
NZ_AP018255.1\|WP_096689152.1\|5532337_5533912_-\|metallophosphoesterase	gnl\|CDD\|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	0.000279317
NZ_AP018255.1\|WP_096689169.1\|5566417_5566945_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	7.2228e-13
NZ_AP018255.1\|WP_096689155.1\|5542391_5543306_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|178283	PLN02679, PLN02679, hydrolase, alpha/beta fold family protein.	1.25832e-59
NZ_AP018255.1\|WP_096689167.1\|5562286_5565694_+\|response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.44176e-57
NZ_AP018255.1\|WP_096689168.1\|5565734_5566217_+\|cupin-domain-containing-protein	gnl\|CDD\|380364	cd02236, cupin_CV2614-like, Chromobacterium violaceum CV2614 and related proteins, cupin domain. This family includes mostly bacterial proteins homologous to CV2614, a Chromobacterium violaceum protein of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	3.73906e-10
NZ_AP018255.1\|WP_096689158.1\|5547567_5548008_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	1.20878e-25
NZ_AP018255.1\|WP_096689157.1\|5544519_5547546_+\|MFS-transporter	gnl\|CDD\|367401	pfam03219, TLC, TLC ATP/ADP transporter.	9.73316e-06
NZ_AP018255.1\|WP_096689163.1\|5556845_5558426_-\|NACHT-domain-containing-protein	gnl\|CDD\|368582	pfam05729, NACHT, NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.	7.59934e-06
NZ_AP018255.1\|WP_096689160.1\|5549227_5551447_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.48583e-95
NZ_AP018255.1\|WP_096689156.1\|5543792_5544326_+\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	9.20471e-91
NZ_AP018255.1\|WP_096689161.1\|5551443_5553789_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	2.06516e-89
NZ_AP018255.1\|WP_096689153.1\|5534015_5534963_+\|hypothetical-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	0.00806357

>NZ_AP018255.1|WP_096689161.1|5551443_5553789_-|WD40-repeat-domain-containing-protein
MNTLSVPPKAQKTYFKKAYLASFAYNLVKSGNLDKYYKILNNFTFIEAKINHLEFGVQALIEDYDLVDDTELLAHPEYNAETVKALKLIQGSLRLSAHIINQDTNQLVAQLTGRLLCFDVPEIQALLEQIAQTQTTCLRPLTASLTPPGGALVRTLGGHSSFVHAVAVTPNSKCVISGSSDETLKVWDLESGKVKFTLEGHSDSVHAVAVTPNSKYVIFGSSDETLKVWDLELGKIKFILDGHSSSVNAVAVTPNSKCVISGSKDRTLKVWGLESGKVKFTLEGHSDSVNAVAVTPNSKYVISGSSDETLKVWDLESGQEKLALEGHSCSVNAVAVTSNSKYVISGSDDETLVWDLESGKVKFTLDDYSIFVNAVAVTPNSKYVISGSWGNTLKVWDLESGKVKFTLEGHSGSVNAVAVTPNSKYVISGSWDRTLKVWDLELGKVKFTFDDHSSFVNAVAVTSNSKYVISGSWDNTLKVWDLESGKVKSTFDAHSNMVSAVAVSANSKYVISGSDDKTLKVWDLESIKVKFTLDGHNDLISAVLITLDSKCVISSSKDRTLKAWDLESGKLKITLDVHNYVNAVAVTPNSKYVIYADCDERLKVCDVESGKVKFTLEGHSGSVNAVVVTPNSKYAISGSSDNTLKVWDLESGKVKFTLEGHSNSVRAVAVTPNSKYAISGSSDNTLKVWDVESGKVKFTLEGHSDLVNAVAVTQNSKYVISGSSDNTLKVWDLPLGKVIASFIGESIITCCTVASDGAIIVAGDTSGRLHFLRLEGMEVEQ
>NZ_AP018255.1|WP_096689160.1|5549227_5551447_-|WD40-repeat-domain-containing-protein
MNTLSVPPKTQKSYFQKAYLSSFPYNLVKSGNLDKYYKILTNFTFIETKINYLEFGVQALIEDYDLIDDTELLANPEYNTETVKTLKLIQGALRLSAHIVNQDTNQLVGQLTGRLLYFDALEIQALLQQIPQATSPCLRTLTGSLTPPGGALVRTLSGHKLAINAVAVTPDGKYIISGSGDKTLKVWDLQSGEEKLTLSGHYDSVKAVTVTPDGQYIISGSSDKTLKVWNLYTGEEKLTLIGHHHSVAAVAVTPNAEYIISGSKDKTLKVWDLLSGEEKFTLSGHDEAVYTIAVTSDSKYIISGSGDKTLKTWDLRTRKETLTLSGHYEQVSAVDITNDGKCIISGSDDNKLKIWDVKEGKEFLTFKGHRKQVKSVGVTPNGKYVISGSADKTLKVWKLQSGGKHIHTFRGHRKQVNAVTVTPDGKYAISGSDDCTIKIWDLRSGKENFNLSAHHHWVNAVVVTNDNNYVISACSDKTLKVWHLQQGKEKLTLKGHHNWVTAVAVTGDNKHVVSASRDKTIKVWDLQSGEELFTLKAHSSYIQAVTVTPDSKYIISGSIDKTLKIWDFLSRQELFTCRHADSVNAVAVSCDGKYVISGSGDCKLILWDLKSGKELFFLQGHSSWVNAVVMAPDGKHAISGSLDTTVKVWDLSSCNLKFNLTGHRDSVNAVAISCNGKYALSASSDSTLKVWDLDIGKEITCFTGDSGLISCTFAPDGATIVAGEASGRLHFLRLEGIEI
>NZ_AP018255.1|WP_096689159.1|5548331_5549225_-|AAA-family-ATPase
MNNHPRLPTEFEQIIQDKIKNFRNFEFVFTAINEFLYRYKHGYFTIVGVPGSGKSAILAKYVTDNPDVIYYNAHVGGKNCAEEFLKSICNQIVETLHVTSLHSVPGNIDNLGSGFLSLLLLHISDNKEPNQRLIIVIDGLDAVDRNRQFSGTNLFYLPRYLPNGVYFIIARRPFTKDKSGLLIEAPSQILDLSKYKTENWDDVEAFTKHWRKMQGDGLSQIQIKMLGALTEAGKDGITVNEIVKNINNDEYDIFEIEEILENWFEFLQQHQIGRETYYSFYHHTFRDWLAYKLKNAK
>NZ_AP018255.1|WP_096689158.1|5547567_5548008_+|cyclic-nucleotide-binding-domain-containing-protein
MLTSVDRLLFVRRVPIFQELRDDFIVRLASVMDELSFGANQTIFRQGEEGRSLFIVVSGRVKVHIEDRQLAVFPQGESFGEMAVFDAQPRSATATALEPSDCLELTQEQLHDAIEETPEIALNIIRVLSRRIRDLNAVINEFGIEE
>NZ_AP018255.1|WP_096689157.1|5544519_5547546_+|MFS-transporter
MELKHHWSAKGLGKSLNEQILAIVNLRPEESQRTWLMLAFYTTTSIGLRWTEDSTVALFLGKYGANWLPLIYLASAVMGTLLVFFYSRLQRVFRLRYVIAGIAPCMFLPLLVLRLGLEIPTLAVATVFLLRLWVDAFYVLNDLNTSIAANHIFNIREIKRAYPIISSGLLVADIFSGFSLPLLLIFVGLKNIIIPVSAIFIVAGALMLLYLSHEHRSSFPEQQVKSAVEALSARPQLSGKLRRYSIALFAFFGLLQIINILIDFQYLTQIETTLSGQEIASFLGVFSGVTGICELLTQLFVSSRVLERFGVFFTTGTLPASIAILLPLSIISLGLLPIMQGQTFFWSLVILKFLDELLRYTFVISGSPLLFQPIPEKFRSNVQILSGGIAEAWGTGIAGALILITLWLGASRIPLAQNWVLVVETTIVALLCLGLLWILRSLYVDLLVLSAGRGKLTGADVDVRTFKQAVVKALKEPGTESDKRSCIDLIAQIDPQGAAEVLAPLLTKLPSTLQISCLEAMLNAGATKTYLPQVNSLLKGTQTEIDPEVFALLLRYIWLAEDNPNLSKLEQFLDEEEHPIIRATAAALLLRQGTTQQKVAGTRTLKAMLTSSSERERVDAVRALSSGVYLLSVRLLIPNLLEDKSLRVRRAMLEMIAATRLEDYYPALCRGLYHKSTRAYAMRAIIKLDNEALPLVLDLATNPHKPEIVRMYAWRTIGEIPTWEAMDTLWKNLETSKGKNRSRILRSLLKRCEKEEIFSKVGKSYQTQVEKLIDEEIIFLCEIYAAYRDLETQGETYANYLEYKTREFVTDYLSSRKVVAICQLLQRALLDLEVDIKERLLLMLKLLYSQDKIQAAAVNVLSESPKNLGRGLEILEHTITLANKSLLLVILDKREPQHKLQALIEAKICKYEQMVVSDRIRHLLTLETLLSDWCLACCFHFASAARIRIATDQIIKNLRHPTSFVREAAIAYLNVASRRVLIELLPQLQKDPHPLIAAQIKELSQKYL
>NZ_AP018255.1|WP_096689156.1|5543792_5544326_+|translation-initiation-factor-IF-3
MLVIEKRRTRDLPQINERIRFPKIRVIDTDGAQLGILTPNEALQLAEEKELDLVLLSDKAEPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKIEEHDYDVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEKLLNRMAKDLESFGEVQQAPKKEGRNMMMLISPKK
>NZ_AP018255.1|WP_096689155.1|5542391_5543306_-|alpha/beta-fold-hydrolase
MVQSKWQHRIGKQRDWVWRGWQTRYTYIRCLKGSNDSIPIILLHGFGASIGHWRQNLEALSEHHTVYALDMLGWGASQKAPCNYSVSLWAEQVYDFWKAFIRKPVVIVGNSLGSLVSITAAAIHPSMVKGLVMMSLPDPSLELEAIPPLLRPTVATIKNFVASPFFLKPLFYFLRQPGVLRRWAAIAYANPEAITDELIDIIAGPTTDRGSVRAFTALFKASIGASFSPSVKAILPTLTMPMLLVWGNLDRFVPPALAPIFAQYNSNLQILNLDNVGHCPHDESPDEVNQVILDWIDTTLVSSR
>NZ_AP018255.1|WP_096689154.1|5540699_5542298_-|hypothetical-protein
MQPKSLKSTLATFSVTLGFGTVAAFFSPSFKTGAAVISSAIASVGMTVFNIKEESKSREQILREVRRIANAHAELEQKVEILERFYQLQSSNQLQFNSVDSNFTSTSVGYTYIEHTPLDIATTGTQQLISELNRLKITLRLPYKQLEKDDLFDTAIFMGDNYTVLASLYRKMKASISGDMQGGFSYKLSGIDEDDNICLRFRSILESKGLWTSKYIKSEKRIRFQPHSGDAKVRSFFEGGWLEKFVVYRICHLLSLYNIKFEYLINPHISYSFEESKFYELDALFIVDNQLILFEVKTGDKSNVYLNQINEHSKRRRLNLSKNRAFLVTTTLTDCETEDWNRNNNNITVVNLNNLTNCFTSSLGLPTASVQTTQVSISTEQLYTFLNHKKLRPSPEHRLNVLKELSNTIASLEEPLTFNEIRNKIAEKLQISKALSEEILRAIRRANCFINLQGEYISQYTQLSEPISGLLSNDISVLESKCIETYASTVLAEYPNFFSTSQNVRVFEEAVGGKAPSVEVISVLKANIRPLN
>NZ_AP018255.1|WP_096689153.1|5534015_5534963_+|hypothetical-protein
MTFFGKYSVIRLILLFFIVVGITAIWTSQVATAISFSSYQAVDVKDGAGLYKKQLSNGNEAYLQVINLQKMQMDQILGSEDGKGLGKGKYYRGEGKYNSPFFIRKSFEEVLKNYQNLHKDKVFSIINCAFFEEYKSSTQLSFPAKLNGKVVTGGSSPYGPVRKPANKYYANIRLKALVWDQNRVYITDYNSATGAPLNRPSVKNAIVTYAANDHPAKVLARNQINRYHVIGTLDKDGKKGDELLLILTVNRATLDEASRQLRLLGVKSNVITIDGGSSTYLFNSRLGNIMLPFAADNSPGLAIRNLPHYLGVRYK
>NZ_AP018255.1|WP_096689152.1|5532337_5533912_-|metallophosphoesterase
MKFISEASTGVKIQKMKERVRWRHSSITARNIDQTSMVLDDGKQNNPDFSFMVIGDSGTKPYPGFHPQRKVAEMMLPHRDECSFVLHTGDVIYVVGSQEYYPRNFIEPYREFIQGGENYKRIPYNRITFNQTPILPVLGNHDYYNVPLMSRLVSGSTKLLRQFFRYKDIEIGWYGSEQGNAYAQAFIDCLGNIDSSLLNEHLDTHYTAKTDTGLCLRYEPGIFTRVPNRYYTFRYGGIDFFALDSDTFNMPSPIPSTKQGEEKRHQLSKQRSDIEAEEIQILEDITKLNPEKSEDAQQLDELNAKLNQIDEVKIDIEKQLASNYKTNLIDWEQLDWLKKRLIESWHSDEVRGRIIYFHHPPYVTEATKWHQAQTLAVRHRLREVFDAVAQTLGSRDSERPIVDLILNGHAHCFEHLRTTNTGYADSNINCIVSGGSGHRPRRQRKEGNSLMEKFITPNRIDNRKVAESYLFAGKNGHGETRRLPYSFVRIDVKAGNPPRFTARPFVAEWYQDKWSNFGLEPFEF
>NZ_AP018255.1|WP_096689163.1|5556845_5558426_-|NACHT-domain-containing-protein
MNLEPVKVINEIARFAAPKIINLAQRNETVIKILKTLNFDPAHPPKDFDGVYNYALVEYAVYKSAPILDFFREKEIKTSFWKAFNNNPSVFLEDAEYFLKWNTLGDEIREQNIDIRPEIEEFYKVFVNVSKRTRTPAEALNDPKFKPLPEQNPYPDEFKSLIEEKIKSFCGRQFVFNAFANFIKNNPNGYFTVVGDAGMGKSAIAAKYVYDHHCPCYFNILAEGRNRPELFLKSIRQQLIQRYDLQDASDADLSTLLVKISKKLLNNERLVILVDALDEVEQEAGAENILSLPYTLPERVYFLLTRRPYNIDKKRLRVSVPVQELDLTATENESLSRDDVRAYIHFFVNNDPEHKYTLRKWIADRNLNLETFIEQVAAKSENNFMYLRYVLPGIARGFYDDLSLDKLPDGLQDYYQVHWVRMGMDTAPKEMRVIILFILVEIGTPIPCEMIADIAQQDGYDVQSVLDEWVEYLKDQEIDGEICYNFYHASFLDFLKGKRVLDSKRKIFTDVNQRIVDYWERVTVDS
>NZ_AP018255.1|WP_096689164.1|5558541_5559573_-|hypothetical-protein
MNYTAYASVSLVKIDTLDNSTTAIIEFAKALLIDKNNLLRPDFNKLIQSFGWGKEVANNYIKLGLAFVDIDIAKLANIEPRTLFKITSSKRFAPVVQGIRNAVGHVTQQFVEHLIDKFKAPRKEKSSKPTIWRGEKDTSRTCVIPPIKEDDQYTGKTIQRAMDNEGITAQSFVREATAFWEAWQCGALILVGELPPHLQAILGDKLGTNAPINEDVEVETTSEQATAVVEVEVDDTTDAPVETVEVINEDTVAPQIEIAINEDSSETENIIEPASAEQIATLIRSCQTWSDITAITESIDKSTRIQSWTMLDKSEQQRILDIKFRDNLQYETPKEVGNLAYKL
>NZ_AP018255.1|WP_096689165.1|5560025_5561762_+|transposase
MGKSLLSELTHRSYSKTKNPDGTRTPQLRVGIEARIDYHPFLDDWGDRYQSIMRTALNALLQGQSEDNIEKSFQSRFDIDWAWADSIATDAKGIFDSLIEARALKIKALNDDLVAGWKSVATTIELMSQQLANPTRKNMKGFAKRLMGTKSKFNRLERKQVEKNELEQATRLHICFGGAKLFNAQYHLEENGYSSHNEWRVDWEKKRGGNFYSVGKGSVLGNNPVAKIFYIDDDIFSVTFTVPRYLRGDYGDTVSVEFEVTGQRKHNLLYALESDKPVTVQCFRREHKNDQWYIHLTTYVQDVPTISSRNNGCIGIDLNAETIDVIYIKRDGNPERCRNALSFPIPTGTTGTKVARLRDIVCEIVKLAEFYQCPIACENLDFSTKKNQLRHSVSKEYNRMLTGFIYDKFRSYLVVRAEKYGIEILFKSPFMTSVIGMVKYMAKYGLNSASSAAMVIARRAMGFKEFIPQKWLKTLSSFFEPEDSKDGGFAGGWRRISAWLKTFCIRRPQLFQLDTVLRFLLDSLVTQSQKKTHKRRKPGGSSKSGGKRTGRAKPTEGQVPLEREEVVVTNIGAVTVAP
>NZ_AP018255.1|WP_096689166.1|5561875_5562250_+|hypothetical-protein
MKHSKGALRWKFKKIMDELDIGTLELAAFMRVNKATVSEWRKADYFPKISEIRWLQICEAMNEMCRLRGKSVKVQPLDLIEFCPDEVRDIRFLDYQHASGYVGKKSASKEKDQTDGSVKDTVAA
>NZ_AP018255.1|WP_096689167.1|5562286_5565694_+|response-regulator
MNDGHKKDFFPGQGEMRGLMRAFDWDSTPVGAVEMWSQSLKSTVKTLLASRYPMVLIWGPHLIQFYNDAYSKLIGDKHPAALGTDIRITLAEAWDTLGPMIDEVMTTGVANWVEAQMLVLERSGYREESYFSLSHAPESDDSEQVVGMFCVCSEVTQQVLGARRLRLLRDLASKAGETQSVETTCRSVAAAIAEHPLDVPFALIYLRSVDGKTLTLQSTVRVANAEHIIPVTFDISAPNKNDIWSLKRACNGETVLIENVDQHLLLPGGPWNEPTVRALVMPIASSGTAYPLGVMVAGISPNRALDEGYSSFYELLAGQVSVALRNAQAYEEERKRARKLAELDREKTIFFSNVSHEFRTPLTLMLGPLSDALQDPEITPTQREQIKIAHRNSLRLLKLVNTLLDFSRIEANRMQAVYELTDLAALTTDLASVFRSAIEKAGLQLIVDCPPLKEHVYVDRDKWEKIVLNLLSNAFKFTQIGHIAVKQYIVGENVELQIQDTGCGIAESEVQNVFKRFYRIEETQGRTHEGTGIGLALVQELVQLHGGAIQVQSVYGQGSTFTVSIPCGKEHLKNNELVRESVLNQTNIRSDAFVQEALGWLSDNVEDIEPLELNEIQQPRAKVLLADDNADMREYVRKLLCTQYEVIAVADGEAALAYAREHLPDIILSDVMMPKLDGFGLLAQLRSDERTSCVPIVLLSARAGEESRVEGLLSGADDYLIKPFSARELLARVKATLETSRLRQEAANSKIEVEAVKLRATILERVTDAFYALDKEWRFTYINSRCEEYLGKNRSELLGKVIWEEFEMVKGTAFDEQYHKAMREQVAVYFEVLSPFSNRWVEVFAYPSVDGLSVNLRDITERKELEARREALLESEQVARAQAEQIGRLKDEFLATVSHELRTPLNSILGWAQILRKQKTVPAEFKKGLEVIERNSRAQAQIIEDLLDMSSIISGKVRLDFKEINLNSIIQAAIESFVPTLQAKNIQLQTVLDALSGSIIGDSNRLQQVVWNLISNAIKFTPEGGKIQVLLSLIDSRVSLTVSDTGIGIKPDFLPYVFHRFRQEDSSIRRNAGGLGLGLSIVKQIVELHGGTVEATSPGVGQGATFTIVLPLAQIEPDKNPLTEENPDLQRFCSF
>NZ_AP018255.1|WP_096689168.1|5565734_5566217_+|cupin-domain-containing-protein
MKKLSLIFPFVILLFGSIVVNSQERSSPKTYTQSVTRKVLANGYPTQDKKQILELVRYIIAPRTKLPIHTHPGMQIERVEAGTLTYTVVKGEAKVTLANGTELIIPKGKTIQLTVGDSLVEPGGMVHYGENQTNSPVILLSASLFNANQPKAILINPENK
>NZ_AP018255.1|WP_096689169.1|5566417_5566945_+|pentapeptide-repeat-containing-protein
MSNQSRWLVYLSDLKLEAHEQWVNNGCVDDGRLIVQERNLSGANIPGANLIKTQFIKCNLSSVNVRGGDLTSIELVECNLDSAMLELSTLDKATIKDCKFIGAYLNATNFIGAKVSGGDWSKTDLHRSDWNSAVVEGVCLGRARLQGARIHGAIFTDCKKASCQLNRHNRIQHCI
>NZ_AP018255.1|WP_096689170.1|5567161_5567536_+|hypothetical-protein
MHTVTLNGTRFQVSEDPDKLIADFLSLALSDYYINQVEELFTPDGEGIDDLYGDVNIYAYRARHIDDLPEYISKSPQLNILENEVWIISASGFCYEAQPIILFGDELRQIIKEAQKLVKCDRLN
>NZ_AP018255.1|WP_096689171.1|5568028_5568295_-|hypothetical-protein
MVFDSRIIRKLYNVFDPSSPLPAGDPAYVDCNDVRGEGDILVDIGKDILLSEEKTCQLYSGHRGAGKSTELLRLQKDLSDKNGNGTYP
>NZ_AP018255.1|WP_096689172.1|5568684_5569395_-|rubrerythrin-family-protein
MELTSNTANNLAEAFGGESMANRKYLFFAEVTRHLGMHELSKLFRETAQQETEHAFAHFRLMHPELVLTDAASLTPEQKKAIAARCLELAIEGETYEYTVMYPGFAEQARGDRDGSAVIEFEKQQAESVEHAQTFRKAAHNFGLLTHVENHHAQQYSEALQALDGVAPAAKTKTGNPATQKWICRQCSMIYDPVTGDPDSGIAAGTPFEAIPDDWKCPICGAQKKLFVIYEEAAAA

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Crispr_ID: NZ_AP018255_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_20

5741953-5744730

Unclear

Consensus_repeat	Method
ATTGAAATTTAAAATAATCCCTTTAAGGGA----------TTGAAAC	PILER-CR
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CRISPRCasFinder
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CRT

38 spacers

cas6,PD-DExK,cas2

The CRISPR arrays of NZ_AP018255_20

>merge|NZ_AP018255|20|5741953-5744730|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATAGGAGTAAGAGCGCTTCCACGTTGATATAAAGCCATGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTCTAAAAAGCGAGCAGCATTCATACCACAAGAAAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGCGATTACGAGTTGCGGTATCACCTAAAATGTCTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTTGAACTGATACCCCTTGTCCCAATCAGAGTAGGAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATATGTTAGGGCGTCGTGGTAGATTACTACCGTGGGGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGCGCCAACTGCTGCATGTATTTCATGGGTAGCTGGTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTACATTGGCTGAAAATCCTCTAAGCATAGTAGCCAGTTTCAATTCCTTAAAGGGATTATTTTAAATTTCAATGCAAGCACTGGTTCCTGCTTTGATTGAAATTAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATATGCCACTGTGCCAGCGACAGAAGCGGAGGCTAATCGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATACAAAAAGCTTTTCATGATAGTATTGGTTCTGCTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATCTAAAACTAATATCATGAACTGTTCGGGAGTTTCGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTCTTCACAGTAAAAAAATCCACTCCTGTTACAGAGTGGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGAATCAGGATTAAGAGCATAACAAGGATATAAGGTTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATAGAACTTAGTATTAAGTATGGTATGCAGCAGGAAGGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGTTTTTAATTCTTCATTTGAAAGTGGGGAAAAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGTTCTTTACCAAATCACCAAGGATTGCTGCATCAGAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATATGATTTATATGGAGATAGAGGTTTATGAACTTAGGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTCGAATTAGTTCGTCTATTGATTCAGCTTTTTCAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGTACCATAATTCGTTACTCGAACTGCACGCTCTTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTGAGTGCGGACATTCTAAAACACATTTCGCCCAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGAGTGCAGCTTACAGCAGTGGCAGGATTTATGTAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTTTAGTATAGTGTTCCCACGTTAGGCTGTTCGCTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTGCTTAAACCCAATTTTATACCTCTTATCATTAATGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATGAAGTATTCCATCCACTGTTGCAATAAAATAATTCCGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATAAAATTGATTTAGATGCTTGGTGGGATTTGGTAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTCAATCTGACCTACGTTGGTGATATTAGTGGCTAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATCTTGTTCAATGATTATTTCATGCTCGCGTAGATGCGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTAAATTAGCAAATGAGCTACATCCACCCTATTTGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATACCTAGCGCGTCAAGGGCATCAAATATCTCTAGCTTAAATGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTTTCCCAGAGATTCCTTTATATCGCTCTCCTCTTGAGATAACGGGAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTGTACCGATTGGGAACTCATCTAGAGGTCATCAAGTGCGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTAAAGATGTTATGAATGATGATAATGCTGCCGAGAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATCTGGTTAAAGGTTGAAAAACTTGCTTTGCTGCAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTTACACCATCTTCGTTTATTGGTAAAGTGGTTGGGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATTCGGTTATCGGTTTAATGATGGATGTTGTCATAAAGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATACATCTATACCTTTACTAGTGAGTTACGCACGATGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATCGACCGTAAATAGTGCTAATTGTGTGCAATCCATGTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAATAATTCGCCTTCTCGAAGTCAATGAAGACTGCTCTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT

>NZ_AP018255|20|5|5741953-5744730|PILER-CR
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AGGAGTAAGAGCGCTTCCACGTTGATATAAAGCCAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCTAAAAAGCGAGCAGCATTCATACCACAAGAAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GCGATTACGAGTTGCGGTATCACCTAAAATGTCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTGAACTGATACCCCTTGTCCCAATCAGAGTAGGA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGTTAGGGCGTCGTGGTAGATTACTACCGTGGG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GCGCCAACTGCTGCATGTATTTCATGGGTAGCTGGT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TACATTGGCTGAAAATCCTCTAAGCATAGTAGCCA
GTTTCAATTCCTTAAAGGGATTATTTTAAATTTCAAT	GCAAGCACTGGTTCCTGCTTTGATTGAAATTAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGCCACTGTGCCAGCGACAGAAGCGGAGGCTAATC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACAAAAAGCTTTTCATGATAGTATTGGTTCTGCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTAAAACTAATATCATGAACTGTTCGGGAGTTTC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCTTCACAGTAAAAAAATCCACTCCTGTTACAGAGTG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAATCAGGATTAAGAGCATAACAAGGATATAAGGTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AGAACTTAGTATTAAGTATGGTATGCAGCAGGAAG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTTTTTAATTCTTCATTTGAAAGTGGGGAAAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTTCTTTACCAAATCACCAAGGATTGCTGCATCAGAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGATTTATATGGAGATAGAGGTTTATGAACTTAG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCGAATTAGTTCGTCTATTGATTCAGCTTTTTCA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTACCATAATTCGTTACTCGAACTGCACGCTCTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGAGTGCGGACATTCTAAAACACATTTCGCCCAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAGTGCAGCTTACAGCAGTGGCAGGATTTATGTA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTTAGTATAGTGTTCCCACGTTAGGCTGTTCGCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGCTTAAACCCAATTTTATACCTCTTATCATTAAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAAGTATTCCATCCACTGTTGCAATAAAATAATTCC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AAAATTGATTTAGATGCTTGGTGGGATTTGGTAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCAATCTGACCTACGTTGGTGATATTAGTGGCTA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTTGTTCAATGATTATTTCATGCTCGCGTAGATGC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TAAATTAGCAAATGAGCTACATCCACCCTATTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACCTAGCGCGTCAAGGGCATCAAATATCTCTAGCTTAAAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTTCCCAGAGATTCCTTTATATCGCTCTCCTCTTGAGATAACGGGA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGTACCGATTGGGAACTCATCTAGAGGTCATCAAGTGC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TAAAGATGTTATGAATGATGATAATGCTGCCGAGAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTGGTTAAAGGTTGAAAAACTTGCTTTGCTGCAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTACACCATCTTCGTTTATTGGTAAAGTGGTTGG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCGGTTATCGGTTTAATGATGGATGTTGTCATAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACATCTATACCTTTACTAGTGAGTTACGCACGAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CGACCGTAAATAGTGCTAATTGTGTGCAATCCAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AATTCGCCTTCTCGAAGTCAATGAAGACTGCT
CTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT

>NZ_AP018255|20|19|5741953-5744730|CRISPRCasFinder
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AGGAGTAAGAGCGCTTCCACGTTGATATAAAGCCAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCTAAAAAGCGAGCAGCATTCATACCACAAGAAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GCGATTACGAGTTGCGGTATCACCTAAAATGTCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTGAACTGATACCCCTTGTCCCAATCAGAGTAGGA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGTTAGGGCGTCGTGGTAGATTACTACCGTGGG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GCGCCAACTGCTGCATGTATTTCATGGGTAGCTGGT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TACATTGGCTGAAAATCCTCTAAGCATAGTAGCCA
GTTTCAATTCCTTAAAGGGATTATTTTAAATTTCAAT	GCAAGCACTGGTTCCTGCTTTGATTGAAATTAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGCCACTGTGCCAGCGACAGAAGCGGAGGCTAATC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACAAAAAGCTTTTCATGATAGTATTGGTTCTGCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTAAAACTAATATCATGAACTGTTCGGGAGTTTC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCTTCACAGTAAAAAAATCCACTCCTGTTACAGAGTG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAATCAGGATTAAGAGCATAACAAGGATATAAGGTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AGAACTTAGTATTAAGTATGGTATGCAGCAGGAAG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTTTTTAATTCTTCATTTGAAAGTGGGGAAAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTTCTTTACCAAATCACCAAGGATTGCTGCATCAGAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGATTTATATGGAGATAGAGGTTTATGAACTTAG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCGAATTAGTTCGTCTATTGATTCAGCTTTTTCA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTACCATAATTCGTTACTCGAACTGCACGCTCTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGAGTGCGGACATTCTAAAACACATTTCGCCCAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAGTGCAGCTTACAGCAGTGGCAGGATTTATGTA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTTAGTATAGTGTTCCCACGTTAGGCTGTTCGCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGCTTAAACCCAATTTTATACCTCTTATCATTAAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAAGTATTCCATCCACTGTTGCAATAAAATAATTCC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AAAATTGATTTAGATGCTTGGTGGGATTTGGTAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCAATCTGACCTACGTTGGTGATATTAGTGGCTA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTTGTTCAATGATTATTTCATGCTCGCGTAGATGC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TAAATTAGCAAATGAGCTACATCCACCCTATTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACCTAGCGCGTCAAGGGCATCAAATATCTCTAGCTTAAAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTTCCCAGAGATTCCTTTATATCGCTCTCCTCTTGAGATAACGGGA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGTACCGATTGGGAACTCATCTAGAGGTCATCAAGTGC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TAAAGATGTTATGAATGATGATAATGCTGCCGAGAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTGGTTAAAGGTTGAAAAACTTGCTTTGCTGCAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTACACCATCTTCGTTTATTGGTAAAGTGGTTGG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCGGTTATCGGTTTAATGATGGATGTTGTCATAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACATCTATACCTTTACTAGTGAGTTACGCACGAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CGACCGTAAATAGTGCTAATTGTGTGCAATCCAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AATTCGCCTTCTCGAAGTCAATGAAGACTGCT
CTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT

>NZ_AP018255|20|6|5741953-5744730|CRT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AGGAGTAAGAGCGCTTCCACGTTGATATAAAGCCAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCTAAAAAGCGAGCAGCATTCATACCACAAGAAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GCGATTACGAGTTGCGGTATCACCTAAAATGTCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTGAACTGATACCCCTTGTCCCAATCAGAGTAGGA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGTTAGGGCGTCGTGGTAGATTACTACCGTGGG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GCGCCAACTGCTGCATGTATTTCATGGGTAGCTGGT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TACATTGGCTGAAAATCCTCTAAGCATAGTAGCCA
GTTTCAATTCCTTAAAGGGATTATTTTAAATTTCAAT	GCAAGCACTGGTTCCTGCTTTGATTGAAATTAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGCCACTGTGCCAGCGACAGAAGCGGAGGCTAATC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACAAAAAGCTTTTCATGATAGTATTGGTTCTGCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTAAAACTAATATCATGAACTGTTCGGGAGTTTC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCTTCACAGTAAAAAAATCCACTCCTGTTACAGAGTG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAATCAGGATTAAGAGCATAACAAGGATATAAGGTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AGAACTTAGTATTAAGTATGGTATGCAGCAGGAAG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTTTTTAATTCTTCATTTGAAAGTGGGGAAAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTTCTTTACCAAATCACCAAGGATTGCTGCATCAGAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ATGATTTATATGGAGATAGAGGTTTATGAACTTAG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCGAATTAGTTCGTCTATTGATTCAGCTTTTTCA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GTACCATAATTCGTTACTCGAACTGCACGCTCTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGAGTGCGGACATTCTAAAACACATTTCGCCCAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAGTGCAGCTTACAGCAGTGGCAGGATTTATGTA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTTAGTATAGTGTTCCCACGTTAGGCTGTTCGCT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGCTTAAACCCAATTTTATACCTCTTATCATTAAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	GAAGTATTCCATCCACTGTTGCAATAAAATAATTCC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AAAATTGATTTAGATGCTTGGTGGGATTTGGTAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCAATCTGACCTACGTTGGTGATATTAGTGGCTA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTTGTTCAATGATTATTTCATGCTCGCGTAGATGC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TAAATTAGCAAATGAGCTACATCCACCCTATTT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACCTAGCGCGTCAAGGGCATCAAATATCTCTAGCTTAAAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTTCCCAGAGATTCCTTTATATCGCTCTCCTCTTGAGATAACGGGA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TGTACCGATTGGGAACTCATCTAGAGGTCATCAAGTGC
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TAAAGATGTTATGAATGATGATAATGCTGCCGAGAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CTGGTTAAAGGTTGAAAAACTTGCTTTGCTGCAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TTACACCATCTTCGTTTATTGGTAAAGTGGTTGG
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	TCGGTTATCGGTTTAATGATGGATGTTGTCATAAA
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	ACATCTATACCTTTACTAGTGAGTTACGCACGAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	CGACCGTAAATAGTGCTAATTGTGTGCAATCCAT
GTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT	AATTCGCCTTCTCGAAGTCAATGAAGACTGCT
CTTTCAATCCCTTAAAGGGATTATTTTAAATTTCAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689304.1\|5738812_5739406_+\|serine-protease	unknown	unknown	gnl\|CDD\|273938
NZ_AP018255.1\|WP_096689315.1\|5757739_5758504_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_AP018255.1\|WP_096689308.1\|5745339_5746851_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|273793
NZ_AP018255.1\|WP_096689302.1\|5737077_5737566_+\|pyridoxamine-5-phosphate-oxidase	unknown	unknown	gnl\|CDD\|200361
NZ_AP018255.1\|WP_096689300.1\|5731250_5733242_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_AP018255.1\|WP_096689301.1\|5736290_5736869_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_AP018255.1\|WP_096689313.1\|5755314_5755662_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236608
NZ_AP018255.1\|WP_096689311.1\|5753953_5754079_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
NZ_AP018255.1\|WP_096689306.1\|5740526_5741456_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689303.1\|5737794_5738718_+\|serine-protease	unknown	unknown	gnl\|CDD\|273938
NZ_AP018255.1\|WP_096694250.1\|5760330_5760876_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|181235
NZ_AP018255.1\|WP_096689316.1\|5758935_5759691_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226975
NZ_AP018255.1\|WP_096689307.1\|5741462_5741894_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689314.1\|5755695_5757609_-\|transketolase	unknown	unknown	gnl\|CDD\|235639
NZ_AP018255.1\|WP_096689299.1\|5729899_5730538_+\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|240077
NZ_AP018255.1\|WP_096689312.1\|5754336_5755104_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226983
NZ_AP018255.1\|WP_096689305.1\|5739402_5740029_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP018255.1\|WP_096689309.1\|5747179_5747902_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018255.1\|WP_096689298.1\|5728282_5728963_+\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238494
NZ_AP018255.1\|WP_096689310.1\|5747965_5748985_-\|DUF1016-domain-containing-protein	PD-DExK	COG4804_PD-DExK_CAS-I:CAS-III	gnl\|CDD\|377634

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689304.1\|5738812_5739406_+\|serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.06183e-31
NZ_AP018255.1\|WP_096689315.1\|5757739_5758504_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.07195e-78
NZ_AP018255.1\|WP_096689308.1\|5745339_5746851_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|273793	TIGR01766, Putative_transposase_MJ0751, transposase, IS605 OrfB family, central region. This model represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by pfam01385, and other proteins. [Mobile and extrachromosomal element functions, Transposon functions].	3.02041e-07
NZ_AP018255.1\|WP_096689302.1\|5737077_5737566_+\|pyridoxamine-5-phosphate-oxidase	gnl\|CDD\|200361	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ. Members of this family are heme utilization proteins, typically designated HutZ. They are members of the PPOX family (pfam01243) and, except for the lack of an N-terminal extension, are closely related to one form of heme oxidase (1.14.99.3), HugZ (TIGR04109). Members typically are found in a three-gene operon with radical SAM enzyme HutW and a protein of unknown function, HutX.	4.52788e-47
NZ_AP018255.1\|WP_096689300.1\|5731250_5733242_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.85522e-58
NZ_AP018255.1\|WP_096689301.1\|5736290_5736869_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	5.2191e-40
NZ_AP018255.1\|WP_096689313.1\|5755314_5755662_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	3.61438e-17
NZ_AP018255.1\|WP_096689311.1\|5753953_5754079_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	8.52867e-12
NZ_AP018255.1\|WP_096689303.1\|5737794_5738718_+\|serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.50009e-42
NZ_AP018255.1\|WP_096694250.1\|5760330_5760876_-\|adenylate-kinase	gnl\|CDD\|181235	PRK08118, PRK08118, DNA topology modulation protein.	4.13584e-20
NZ_AP018255.1\|WP_096689316.1\|5758935_5759691_+\|hypothetical-protein	gnl\|CDD\|226975	COG4627, COG4627, Uncharacterized protein conserved in bacteria [Function unknown].	7.18665e-06
NZ_AP018255.1\|WP_096689314.1\|5755695_5757609_-\|transketolase	gnl\|CDD\|235639	PRK05899, PRK05899, transketolase; Reviewed.	4.34708e-41
NZ_AP018255.1\|WP_096689299.1\|5729899_5730538_+\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|240077	cd04726, KGPDC_HPS, 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.	6.09449e-76
NZ_AP018255.1\|WP_096689312.1\|5754336_5755104_+\|hypothetical-protein	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	2.67713e-15
NZ_AP018255.1\|WP_096689305.1\|5739402_5740029_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.18483e-48
NZ_AP018255.1\|WP_096689309.1\|5747179_5747902_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	5.64418e-34
NZ_AP018255.1\|WP_096689298.1\|5728282_5728963_+\|isochorismatase-family-protein	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	5.99284e-45
NZ_AP018255.1\|WP_096689310.1\|5747965_5748985_-\|DUF1016-domain-containing-protein	gnl\|CDD\|377634	pfam06250, DUF1016, Protein of unknown function (DUF1016). Family of uncharacterized proteins found in viruses, archaea and bacteria.	5.13756e-83

>NZ_AP018255.1|WP_096689307.1|5741462_5741894_+|hypothetical-protein
MIGGDKINAYLGTDFTRYTNDGWTFSGGAIGYTNPDNDYYSQVSGSISKKISLGKNSNLVLSTGLNYAIDRKAEIDQFVVKSPGSSITLGARANLGNVSLGLVNYFGDILPNSIANTLLADVSWNLSKNFLISGILYSHKRKF
>NZ_AP018255.1|WP_096689306.1|5740526_5741456_+|hypothetical-protein
MRNIKWHSENNSINKDTLFPSRIFQTSKFGDVVSPESVEAMKQPGFQMGANGEQYGIDLYFPNTGSTYGNAQSNQTSISRAENIENTPVGIYSTVRRIVRANDKEAVIGRTVRGFGAIGGDKNALLNSAFQLTGLLLPDADPQIEGSNKPFNKNINVNLFFAANNARLPENSYSFYHSGIGKAKSPYLDANNVNQVPAATFDSIWIGVSPVKKYSFSSKSRYELTGSTKTLSAAGTEGGLDTNVNIAANINGQNFSNYLMKDFYSQIYLQVFSQDANLRTTTKFTEETNYYPHISMSGNITTQNNVWRY
>NZ_AP018255.1|WP_096689305.1|5739402_5740029_+|response-regulator-transcription-factor
MIRVLVVAASPVVRVGLAAVLASSPKFQVFTSGADIDILTKIAEQQPDVLLLDWNDNREFWDTLLQSQHSIPIIVITSNDQLDINFMLRAGVRGILSPEARESEIMLAVETVAAGMVVFHPEMIDYLLAASSLSTEAMPTNPTQVLTPREIEVLQLLASGTGNKAIAQNLHISEHTVKFHISSIFQKLNVSTRTQAVAVGIRLGLVMF
>NZ_AP018255.1|WP_096689304.1|5738812_5739406_+|serine-protease
MVSTVLTYISTELTSIAQQLRQNTVKVRINNESAGSGVILRSDGVIITNAHVATSKRAVVELWDGRVVEAVRTKIDPTVDLATLQITVDNLDAAIIGNVSNLRVGELVLAVGNPFGDTGVVTVGMVSCLVPYINKSVQKTYSSVLADITLHPGNSGGLLADCYGRVIGINTMIVYGAAVAIPVSTVENFLNSAAEVI
>NZ_AP018255.1|WP_096689303.1|5737794_5738718_+|serine-protease
MSISSNAPNLLLSLSQSLADIVELSAGAVVSVNAGRRFSPSGIHWRNGIIVTSDESLHNVEDITVTIRGGKTVPAKLLGRDASTDIAVFQISNPDIPVANIGDATTLKVGHLVLGMALSREGDIKAAMGTISVCSGTWKSMSGGNIDQFIRPDITLYPGFAGGPLVDANGNVVGMNTSGRRATALTIPSETVNRVVDQLVAKGRIAKGYLGVGMQPVRLPKNLLSSLNLSSDGGVIVVNIDNNAPAEQAGILLGDILITFDGARVQDTNDILGYLNQGQSVNQSVSVQIIRGGELVNLTVTVGERPF
>NZ_AP018255.1|WP_096689302.1|5737077_5737566_+|pyridoxamine-5-phosphate-oxidase
MSQFEAIQTAYQIFTDQFQSAVICTVSEDGLPNASYAPFVIDDMKNIYIYVSGLSTHTQNLNVKPLASVLFIEDESKTQQMFARRRLSYDCTASLVNSNTATWIQIVSDFESRFGNIIQVLRDLPDFRIFQLTPTSGRFVVGFGAAYDVDASDLNKLIHVTG
>NZ_AP018255.1|WP_096689301.1|5736290_5736869_-|L,D-transpeptidase
MRTWNLVKGLIAFAPLISIVSTTLLLSDSSHAVVVASSQKAPASVSTDKPKKPGQEIETEPAANEIHLVVKLRAKIVYVYRGPEIIATYPIAVGKSGWETPKGIYHVFEQEINPIFKSFKTGRIIQPGPENPLGPRWIGIWTDGKSRIGFHGTNQPQFIGQAVSHGCIRMHNKDVIALFDKVKVGTVVKVEP
>NZ_AP018255.1|WP_096689300.1|5731250_5733242_+|response-regulator
MSYIWNHLLKRCYTYSTRYHFIRYIIAALSVAVALLLTLSLHPLLKSTVFSLFFAAVTFSAWYGGLETGLLATVLSILACDFFLAPETDNLILRHGANFLHFVLFTLVAVLVSSLYARLHKAKQKVETNLVKLQLSEEKYRRIVDTASEGIWLLNDNLHTEFVNEQLASMLGYRVSEMNARSFEEFITSTNRTEMKKIVERWQNGSKEKFDCCFRAQNGSELWAIVSSTPIFTSEGNFNGVLTMLTDITARKGIEIERTQLLEREQVSRREAEAANRCKDEFLAMLSHELRSPLNPIIGWAEILQSKKLNSEKTDYALKAIERNAKLQAKLIEDLLNVSRILQGKLSIESHRINLLSVIEATIETVRLAAEEKAISLNSNHESFHPEMPSHRFDLLGDSKRLQQIFWNLLLNAIKFTPHGGRIDIELSFIANQNFAQIQVKDTGIGIDSEFLPHVFESFRQADNSTTRKFGGLGLGLAIVRQLVELHGGTVEADSLGKGQGATFIVNLPLLTQESEAIEISHSDTDLYINYSYLTNLKILVVDDEADIRDLLVSLLEQYGAIVTTAVSAEHALEILAVSEQDLMISDIGMPNVNGYALMRQVRNSSIQHRQIPAIALTGYASDFDIQQSHLAGFDKIIAKPIEQAKLISAISSMNMSKTYQNI
>NZ_AP018255.1|WP_096689299.1|5729899_5730538_+|3-hexulose-6-phosphate-synthase
MKLQVSIDLVSLEQALNLLKEVAQYVDIIEAGTPLIKQEGLRVVTAFKQAYPDKLIFADMKTMDAGELEAELAFQAGADITTVLAVANDATLSGAIAAAQKYGKSVTADMIGVHDRLQRAKELKQLGIQSLEMHWGLDEQAHHNWDFNELRVIKDTVGIPFAVAGGINETTINQVQATGAEVAAVGGAIYNATSPVEMALRLRSQISALSTV
>NZ_AP018255.1|WP_096689298.1|5728282_5728963_+|isochorismatase-family-protein
MVFATNGHNNNDAYLEFLTPDNAAMLLIDHQTGTMLGVQDIRLDQFRSNVLALAKTAKLHKLPTVITVSYAEGPNGPLMRELAEMFPEVDVVSRPGPINAWDDQNFVKAVEATGRKKLIMAGVTTDICLYFPAISAKRAGYDVWCIYDASGCWDMMSELSTILRLQQAGCIVSNWAVVTAMLQRDWRNQSASGTLDIFGEHLPFYSMLSNNMEKTKAQVEKQQAII
>NZ_AP018255.1|WP_096689308.1|5745339_5746851_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MRKQTYVKQIHTNTDTGLFLADYAAISTYASIFSLKGLLSNQKKSELNTTLQKKYAINKRQASSIIAFIEGEIKSARDSLARHIQTLESKIKSLKSSIDTLEKKVKKHIEYLKTVAKYNSTKKQGKKAKISSKYQPQFDEASSRVFGRESGTYYQSAKNKLHNQKRKLHRMVCQLKHLKSKQLHVNLGNKETIYFVGSKDESNGNQVCQLILGLEKDSLDILKIRVPYALESRYGEYVEIPINLNGYGDKEIRAAWACGQAITYRIIQRKYGVWSAHITVDVYQPITSDSVMLGCIGVDLNINSVAWCKVNADGNPKRFGDIKFNLHSLSTNQTEAVLAEVVTELTTLALAFKCPIVIEELDFDGKKARLNNGAKYKRYNRMISGFAYNRFYELLSSRCFKLGIKLITVNPAYSSLIGMTKFMSLYGMNSGTAAALVLARRAMNYSEGVPARAAYEGMEHKKHVWSHWNVLSKRVKGIARHSFFTPRPTASSSLRNGYIEKYP
>NZ_AP018255.1|WP_096689309.1|5747179_5747902_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPHSLVLNLLPQSSIYPQFLTGRHYHALFLNLVSSVDKSLGDILHDTTIDKAFTLSPLQIYCRQTSLKSNSLQWQHQEPIQPGTPCWWRLSLLDDTLFSKLTKLWLNINPEKAWHLGSADLFITSILATPQSSQPWANACTYAQLYEQASGAERNINFTFATPTAFRQGSFDTALPSKESVFKSLLQRWNKYSGIEISNDIIECIFPSFFNIRTEIASDSRSKFIGCVGLSAVTQNHRIS
>NZ_AP018255.1|WP_096689310.1|5747965_5748985_-|DUF1016-domain-containing-protein
MNKPIPEEYGSLLLEVKQRIRSAQYEALKAVNKELIALYWDIGKIIVGRQQSNSWGKSVVEQLAKDLQTEFPGISGFSAANLWRMRLFYESFANNEKLAPMVREIGWTHNIVILEKCKDDLEREFYIRMTKKFGWTKNVLIHQIENQTYEKTLLNQTNFQQTVSQEIRNQAKLAVKDEYIFDFLELADEHSEYQLEKAILARVEPFLQEMGGMFAFMGSQYRLEIDDEEYFIDILLYHRLLKCLVAVELKIGKFLPEYIGKMQFYLAALDDKVKQPDENPSIGIILCKSKSQTIVEYALRESNKPIGVATYQIVSTVPQELKNKLPAPEQVSKLLEGIE
>NZ_AP018255.1|WP_096689311.1|5753953_5754079_-|CRISPR-associated-endonuclease-Cas2
MFVVISYNVPSDRRRIKIHKTLKSYGQWMQHSVFDTTVFFA
>NZ_AP018255.1|WP_096689312.1|5754336_5755104_+|hypothetical-protein
MVRQVTEFDAADDLVIYPETDGEPMAQNTLQFIWIVIIKEGLEILFASNPDVFVAGDLFWYPIAGDIDTKYAPDAMVVFGRPKGRRGSYVQAREGNIAPQVVFEILSPGNRKKEMDDKFDFYQKYGAEEYYVYDPDKNILKGWLRSKKTLKPINKINNWVSPRLQIKFVLTPETLEIYRPDGRKFVTPVELDEMYEQAQQRADAEKQRADAEKQRAETERQARLNAVRQLLQTGMSIEQVAQIFSLTVQEVEEQL
>NZ_AP018255.1|WP_096689313.1|5755314_5755662_+|RNA-polymerase-sigma-factor
MSDERDLELIFQSQQGNKAAFGLLVSRYQPMAQRLAIRVMGNKDLAQELVQEAMLQAYLSLEKLNDPTRFKSWLYGIVLNVCVGICNKIISGEIPPSPVPQEKVEKLMDSGKLSD
>NZ_AP018255.1|WP_096689314.1|5755695_5757609_-|transketolase
MTTTNIQFPINLGAYKYISLNPANGTLTAEDREALKANIQLCRDAIVFFTATGAARGVGGHTGGPYDTVPEVMILDAFFRGAADKFVPIFFDEAGHRVGTQYLMSTLHGDLPEQQLLRYREANSKLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAMAHPGKTVFCLGSDGSQQEGNDAEAARLAAALHLNVKLIIDDNDVTIAGHPSKYLPGFTVAKTLTGHGIKVLEGDGEDIDDLYRRLCEAVNTPGPIAVINKRPMCPAIEGLEGSTHGHDVISVDLAVKYLEARGHSAAVEYLNNIEKPKQTYTFLGSSDKWGANRNVFGEAVVNILSRMSEAERKEKVKVIDSDLEGSCGLKKIHDAYPEVFVPSGIMERGNFSAAAGFGMERGKQGIFATFSAFLEMCISEITMARLNYSNVLCHFSHAGIDDMADNTCHFGLNNMFADNGLDDGHPTHLYFPADTNQMTACVEAIFSDPGLRFIFSTRSKVPTIKGSDGNELFGDNYKFVPGKDEVVREGTQGYIVSFGDALYRALDAVERLKQEGIDVGLINKPTLNVIDEEMIAKIGKAPFVLVVEAFNRRTGLGSRFGSWLLERGYTPKYNYLATHKEGCGGLWEQFPHQGIDPVSIINQVKNLIK
>NZ_AP018255.1|WP_096689315.1|5757739_5758504_+|DeoR/GlpR-transcriptional-regulator
MLTAERRQFILEILRRDKKVLSSELSAVLKVSEDTIRRDLRELAETGLLKRVHGGALLTSPATASYADRIQQAPIEKEAIARAAASLVRPGQVVILDGGTTTLQVARHLPKDLEATVITNSPPIAVALAEYAYIEVVMLGGQLYKKALVNIGAATVEALQMIRADLCMLGVCSLHPEIGISVTNLNEAHVKRAMMKSAAEVVGLVTAAKLDTAAPYVVGSIHALTYLVTAPVVPLNVLTAYKALGLTIIREDYV
>NZ_AP018255.1|WP_096689316.1|5758935_5759691_+|hypothetical-protein
MGISMDVKLDFTAEERKILLEEMQILEHNISIFDWGLRGFRTYASAVFTLPLTNFMQTIGYNKKKLVDLNKSDKVILNIGCRDDTNNDYINAELFPSLGEMWRILRGKRRIEYDLFLNICYEDKNLLEVADGIILSHVLEHIPLNLALVALKNCFKYLKKNGCIRICVPYLGRYQQPLNTSYEKAKNMLAVNTIIYCYGHKVMYNVELLKLLMAEVGFSQIEEVNFQEGLLGMSDLPERQPESIYLTGIKI
>NZ_AP018255.1|WP_096694250.1|5760330_5760876_-|adenylate-kinase
MKKVAVFGNTGGGKSTLSKRLSEITNLPLHPLDKIQYQSGGAEVPHEDYKRAHQKILLTDQWIIDGFGCMETVWQRLDEADSLVFVDLPLHVHFWWVTKRLLTSKFKPPEGWPEKSPILKSAINCYRTLWLCHKYLTPRYRKYIEQAQSTKSVYHIKSIEQISQFLESITNDTNFEDVTPA

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Crispr_ID: NZ_AP018255_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_21

5749233-5753691

Unclear

I-D,II-B:NA

Consensus_repeat	Method
GTTTC----AATCCCTAAAAGGGATTTTATAAAGTTTAAAC	PILER-CR
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CRISPRCasFinder
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CRT
GTTTC----AATCCCTAAAAGGGATTTTATAAAGTTTAAAC	PILER-CR

61 spacers

PD-DExK,cas6,cas2

The CRISPR arrays of NZ_AP018255_21

>merge|NZ_AP018255|21|5749233-5753691|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATAATAGTCGGGTAAAGTGCGAAAATCGTCATCAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACAGTCAGCATTGCGCTTGGTGGTCGCTACGAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTGCCCACGCCCTCAACTATAAATCTACTTCTAATTGGTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAACTCTTACGCGAACGTGTAACTGTCCGAAGAATCTCGTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAACAATGTGTTGAAGCGGGGGTGATAGGCTGTAAAGGTAGTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAACATTGTTGATGGTAAAGTTGAGTCAGTTAAAAGAGAGTTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCCGATAAGCCATTTTTACTTCAGCCTCATTTGCTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTATAGTAGTGTTCAGTTGAGCAAGTTAATTGCTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGATATCCCAGCGCGAAGAATCTATCATATCCAGTAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTGTGGCGCCACTACTTCAGTTTTAGATTCTGTTTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATAATGAGTCTTGATTATGAAGGCTAATTTCTGAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCATAGACGATAAAATGAGTTACATGCCCGATAATGTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTTCTTGACTAGCGCCAATTAAAACAGCGCGTCCAGCATGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCTCGCAGCATTGTTAAAAACTAAAGCGTTTGCAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCAATTGGCAGTTTCTTTACCAATTTATTTAGAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTACATTACGCACTCTTAAGAGAGTCGGCGCATAGCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCTCACTTATTTAAATACTGCACTACTTCGCTCCACAGGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTACTATTAAATGGCGAGTATGGACGAGCTACAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTGAACTACGATATAGCGAGTCGATGATAATTTTAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACACTTTGATCCAAGGTGAGCGCAATCCTTACAGATACGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCTAAATATCGCTTGGCACGTTGCCTATGAATTGCAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGCATCGGTAGAATTAGCTCCTTACCCCAAACTTCATGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCATGTACGAACTTGTTTTAAGCATGTCCAAGAAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTAAACACACCCTCTGTGTACAGTGCCAAGCTACCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTATTAAGCAACTTGAGTTACTCGCTACCCTACTCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTACGATGATTATCTAACGCACAAAGATAAAGCGAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGATACCAAACTTGCAGATGATATTGGAATGTACGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTTGGATGGTACAAATCAGCAGAAACATGGGATAATAGCGATGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGTAATTACTTATTTAGGGAGATTGATTGTGTTTTCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTTCAAATGCTTTAGGCAATGAAAAGCAAGCAACTATTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCTATTTTTAATAAAGGACTTCATACAAACAGCTGCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCACAAGTGCATGATTATCCTGTAGATGTACATAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATGTCCTTGCCTTGATTTTAAGTCAGTGGCGCCAGGGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTTAGCTGCATTATTGAGTCTTGTTAACGCCTCAGCAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTACTAACCAGCCAAGTACTGGAATGTATTTTACAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGAGCCATCATTACCGTCAATGCCTCCTTCTATTGAATTAGTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCGAAGCGGAACAAGCGCGCAAAAAAGTGATTGAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCTGTGAAAATGTATTTTGTTTCGGGTGCCTCTAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGTACTACTGCATTCACTTTGATAGCCCAATAGGGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTATTTCTGAATCAAATCCCTATTGCTCTGCTTAAGTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGCTATCAAGACAGCGAACAGTTCAAGCAGTAAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGCAAGCGGATACGATTCTAGAGTACTTAGTTAAGCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACACTTACTCAATTTTCTTGCTGACAATCATCATGAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATGGTAAGAAAAAACATAAGCCTGTAAAAGTTGGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACACTTGCAAAAGAAGCGCGATTTACTAACATTAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACAAAATTTACGTAAGGGGTAATTAATGCCTTACTTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGAGGTTGCATTAGTCAATTCAAAACGTGGTAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCCTGTAATCATGCTGTTCTTCCCTACGTTGTACTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTAGAGCTTCTATGTCATTAATGTATTGTGTTAGTTCATGCTGTTCTTCCCTACGTTGTACTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATATCAAAGAATATATAGGGCAGGGTATAATGTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCTCTTGCCAGAGATATCAAGCAAGGTAAAAAATTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATTATCAGCAAGCGGCTCTAAAGTTATGGTCGTAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTCCAGCAACTTTAATGTCAGAATCCACCACATTAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACATTGTTTATATCAAAAAACACAAAAATTTTGCTTGAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACACCAATTTCACCGCGCGGACCAGTTTTACCTATCGGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGTTACTGCTTTGTTACCTCAGTTGTTTGAGCCAAGCGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTTCTTACATCTTGTCAAGCAATTATTTAAAAAAATAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTATGTGGAGCTACTTCAGTAGCCATCCTTGATGGAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGCAACAATAACATCTTATCCCGTAATAGCTTGGAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTTAATTTCACTCAACTTAGTACAGTCGCTAGTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACTAGTGGACGTAGTGATATTGCTCCAGCTTCTCGGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC

>NZ_AP018255|21|6|5749233-5752590|PILER-CR
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATAGTCGGGTAAAGTGCGAAAATCGTCATCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AGTCAGCATTGCGCTTGGTGGTCGCTACGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGCCCACGCCCTCAACTATAAATCTACTTCTAATTG
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	TCTTACGCGAACGTGTAACTGTCCGAAGAATCTC
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	AATGTGTTGAAGCGGGGGTGATAGGCTGTAAAGGTA
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	ATTGTTGATGGTAAAGTTGAGTCAGTTAAAAGAGAGTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CCGATAAGCCATTTTTACTTCAGCCTCATTTGCT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATAGTAGTGTTCAGTTGAGCAAGTTAATTGCTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATATCCCAGCGCGAAGAATCTATCATATCCAGTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGTGGCGCCACTACTTCAGTTTTAGATTCTGTTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATGAGTCTTGATTATGAAGGCTAATTTCTGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CATAGACGATAAAATGAGTTACATGCCCGATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTGACTAGCGCCAATTAAAACAGCGCGTCCAGCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCGCAGCATTGTTAAAAACTAAAGCGTTTGCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCAATTGGCAGTTTCTTTACCAATTTATTTAGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACATTACGCACTCTTAAGAGAGTCGGCGCATAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCACTTATTTAAATACTGCACTACTTCGCTCCACAG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTATTAAATGGCGAGTATGGACGAGCTACAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGAACTACGATATAGCGAGTCGATGATAATTTTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTTGATCCAAGGTGAGCGCAATCCTTACAGATAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTAAATATCGCTTGGCACGTTGCCTATGAATTGCAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCATCGGTAGAATTAGCTCCTTACCCCAAACTTCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCATGTACGAACTTGTTTTAAGCATGTCCAAGAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAAACACACCCTCTGTGTACAGTGCCAAGCTACC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTAAGCAACTTGAGTTACTCGCTACCCTACTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACGATGATTATCTAACGCACAAAGATAAAGCGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATACCAAACTTGCAGATGATATTGGAATGTAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTGGATGGTACAAATCAGCAGAAACATGGGATAATAGCGAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTAATTACTTATTTAGGGAGATTGATTGTGTTTTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCAAATGCTTTAGGCAATGAAAAGCAAGCAACTATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTATTTTTAATAAAGGACTTCATACAAACAGCTGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCACAAGTGCATGATTATCCTGTAGATGTACATAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGTCCTTGCCTTGATTTTAAGTCAGTGGCGCCAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAGCTGCATTATTGAGTCTTGTTAACGCCTCAGCAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTAACCAGCCAAGTACTGGAATGTATTTTACAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GAGCCATCATTACCGTCAATGCCTCCTTCTATTGAATTAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCGAAGCGGAACAAGCGCGCAAAAAAGTGATTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTGTGAAAATGTATTTTGTTTCGGGTGCCTCTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTACTACTGCATTCACTTTGATAGCCCAATAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTTCTGAATCAAATCCCTATTGCTCTGCTTAAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCTATCAAGACAGCGAACAGTTCAAGCAGTAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAAGCGGATACGATTCTAGAGTACTTAGTTAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTACTCAATTTTCTTGCTGACAATCATCATGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGGTAAGAAAAAACATAAGCCTGTAAAAGTTG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTGCAAAAGAAGCGCGATTTACTAACATTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AAAATTTACGTAAGGGGTAATTAATGCCTTACTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGAGGTTGCATTAGTCAATTCAAAACGTGGTAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCCTGTAATCATGCTGTTCTTCCCTACGTTGTACTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGAGCTTCTATGTCATTAATGTATTGTGTTAGTTCATGCTGTTCTTCCCTACGTTGTACTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATATCAAAGAATATATAGGGCAGGGTATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTCTTGCCAGAGATATCAAGCAAGGTAAAAAATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTATCAGCAAGCGGCTCTAAAGTTATGGTCGTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCCAGCAACTTTAATGTCAGAATCCACCACATTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTGTTTATATCAAAAAACACAAAAATTTTGCTTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACCAATTTCACCGCGCGGACCAGTTTTACCTATCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTTACTGCTTTGTTACCTCAGTTGTTTGAGCCAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTACATCTTGTCAAGCAATTATTTAAAAAAATA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATGTGGAGCTACTTCAGTAGCCATCCTTGATGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAACAATAACATCTTATCCCGTAATAGCTTGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAATTTCACTCAACTTAGTACAGTCGCTAGTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGTGGACGTAGTGATATTGCTCCAGCTTCTCG


>NZ_AP018255|21|20|5749233-5753691|CRISPRCasFinder
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATAGTCGGGTAAAGTGCGAAAATCGTCATCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AGTCAGCATTGCGCTTGGTGGTCGCTACGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGCCCACGCCCTCAACTATAAATCTACTTCTAATTG
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	TCTTACGCGAACGTGTAACTGTCCGAAGAATCTC
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	AATGTGTTGAAGCGGGGGTGATAGGCTGTAAAGGTA
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	ATTGTTGATGGTAAAGTTGAGTCAGTTAAAAGAGAGTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CCGATAAGCCATTTTTACTTCAGCCTCATTTGCT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATAGTAGTGTTCAGTTGAGCAAGTTAATTGCTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATATCCCAGCGCGAAGAATCTATCATATCCAGTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGTGGCGCCACTACTTCAGTTTTAGATTCTGTTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATGAGTCTTGATTATGAAGGCTAATTTCTGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CATAGACGATAAAATGAGTTACATGCCCGATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTGACTAGCGCCAATTAAAACAGCGCGTCCAGCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCGCAGCATTGTTAAAAACTAAAGCGTTTGCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCAATTGGCAGTTTCTTTACCAATTTATTTAGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACATTACGCACTCTTAAGAGAGTCGGCGCATAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCACTTATTTAAATACTGCACTACTTCGCTCCACAG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTATTAAATGGCGAGTATGGACGAGCTACAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGAACTACGATATAGCGAGTCGATGATAATTTTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTTGATCCAAGGTGAGCGCAATCCTTACAGATAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTAAATATCGCTTGGCACGTTGCCTATGAATTGCAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCATCGGTAGAATTAGCTCCTTACCCCAAACTTCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCATGTACGAACTTGTTTTAAGCATGTCCAAGAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAAACACACCCTCTGTGTACAGTGCCAAGCTACC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTAAGCAACTTGAGTTACTCGCTACCCTACTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACGATGATTATCTAACGCACAAAGATAAAGCGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATACCAAACTTGCAGATGATATTGGAATGTAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTGGATGGTACAAATCAGCAGAAACATGGGATAATAGCGAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTAATTACTTATTTAGGGAGATTGATTGTGTTTTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCAAATGCTTTAGGCAATGAAAAGCAAGCAACTATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTATTTTTAATAAAGGACTTCATACAAACAGCTGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCACAAGTGCATGATTATCCTGTAGATGTACATAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGTCCTTGCCTTGATTTTAAGTCAGTGGCGCCAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAGCTGCATTATTGAGTCTTGTTAACGCCTCAGCAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTAACCAGCCAAGTACTGGAATGTATTTTACAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GAGCCATCATTACCGTCAATGCCTCCTTCTATTGAATTAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCGAAGCGGAACAAGCGCGCAAAAAAGTGATTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTGTGAAAATGTATTTTGTTTCGGGTGCCTCTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTACTACTGCATTCACTTTGATAGCCCAATAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTTCTGAATCAAATCCCTATTGCTCTGCTTAAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCTATCAAGACAGCGAACAGTTCAAGCAGTAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAAGCGGATACGATTCTAGAGTACTTAGTTAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTACTCAATTTTCTTGCTGACAATCATCATGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGGTAAGAAAAAACATAAGCCTGTAAAAGTTG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTGCAAAAGAAGCGCGATTTACTAACATTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AAAATTTACGTAAGGGGTAATTAATGCCTTACTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GAGGTTGCATTAGTCAATTCAAAACGTGGTAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CCTGTAATCATGCTGTTCTTCCCTACGTTGTACTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGAGCTTCTATGTCATTAATGTATTGTGTTAGTTCATGCTGTTCTTCCCTACGTTGTACTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATATCAAAGAATATATAGGGCAGGGTATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTCTTGCCAGAGATATCAAGCAAGGTAAAAAATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTATCAGCAAGCGGCTCTAAAGTTATGGTCGTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCCAGCAACTTTAATGTCAGAATCCACCACATTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTGTTTATATCAAAAAACACAAAAATTTTGCTTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACCAATTTCACCGCGCGGACCAGTTTTACCTATCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTTACTGCTTTGTTACCTCAGTTGTTTGAGCCAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTACATCTTGTCAAGCAATTATTTAAAAAAATA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATGTGGAGCTACTTCAGTAGCCATCCTTGATGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAACAATAACATCTTATCCCGTAATAGCTTGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAATTTCACTCAACTTAGTACAGTCGCTAGTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGTGGACGTAGTGATATTGCTCCAGCTTCTCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC

>NZ_AP018255|21|7|5749233-5753691|CRT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATAGTCGGGTAAAGTGCGAAAATCGTCATCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AGTCAGCATTGCGCTTGGTGGTCGCTACGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGCCCACGCCCTCAACTATAAATCTACTTCTAATTG
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	TCTTACGCGAACGTGTAACTGTCCGAAGAATCTC
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	AATGTGTTGAAGCGGGGGTGATAGGCTGTAAAGGTA
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	ATTGTTGATGGTAAAGTTGAGTCAGTTAAAAGAGAGTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CCGATAAGCCATTTTTACTTCAGCCTCATTTGCT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATAGTAGTGTTCAGTTGAGCAAGTTAATTGCTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATATCCCAGCGCGAAGAATCTATCATATCCAGTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGTGGCGCCACTACTTCAGTTTTAGATTCTGTTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATGAGTCTTGATTATGAAGGCTAATTTCTGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CATAGACGATAAAATGAGTTACATGCCCGATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTGACTAGCGCCAATTAAAACAGCGCGTCCAGCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCGCAGCATTGTTAAAAACTAAAGCGTTTGCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCAATTGGCAGTTTCTTTACCAATTTATTTAGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACATTACGCACTCTTAAGAGAGTCGGCGCATAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCACTTATTTAAATACTGCACTACTTCGCTCCACAG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTATTAAATGGCGAGTATGGACGAGCTACAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGAACTACGATATAGCGAGTCGATGATAATTTTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTTGATCCAAGGTGAGCGCAATCCTTACAGATAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTAAATATCGCTTGGCACGTTGCCTATGAATTGCAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCATCGGTAGAATTAGCTCCTTACCCCAAACTTCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCATGTACGAACTTGTTTTAAGCATGTCCAAGAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAAACACACCCTCTGTGTACAGTGCCAAGCTACC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTAAGCAACTTGAGTTACTCGCTACCCTACTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACGATGATTATCTAACGCACAAAGATAAAGCGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATACCAAACTTGCAGATGATATTGGAATGTAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTGGATGGTACAAATCAGCAGAAACATGGGATAATAGCGAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTAATTACTTATTTAGGGAGATTGATTGTGTTTTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCAAATGCTTTAGGCAATGAAAAGCAAGCAACTATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTATTTTTAATAAAGGACTTCATACAAACAGCTGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCACAAGTGCATGATTATCCTGTAGATGTACATAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGTCCTTGCCTTGATTTTAAGTCAGTGGCGCCAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAGCTGCATTATTGAGTCTTGTTAACGCCTCAGCAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTAACCAGCCAAGTACTGGAATGTATTTTACAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GAGCCATCATTACCGTCAATGCCTCCTTCTATTGAATTAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCGAAGCGGAACAAGCGCGCAAAAAAGTGATTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTGTGAAAATGTATTTTGTTTCGGGTGCCTCTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTACTACTGCATTCACTTTGATAGCCCAATAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTTCTGAATCAAATCCCTATTGCTCTGCTTAAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCTATCAAGACAGCGAACAGTTCAAGCAGTAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAAGCGGATACGATTCTAGAGTACTTAGTTAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTACTCAATTTTCTTGCTGACAATCATCATGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGGTAAGAAAAAACATAAGCCTGTAAAAGTTG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTGCAAAAGAAGCGCGATTTACTAACATTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AAAATTTACGTAAGGGGTAATTAATGCCTTACTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GAGGTTGCATTAGTCAATTCAAAACGTGGTAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CCTGTAATCATGCTGTTCTTCCCTACGTTGTACTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGAGCTTCTATGTCATTAATGTATTGTGTTAGTTCATGCTGTTCTTCCCTACGTTGTACTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATATCAAAGAATATATAGGGCAGGGTATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTCTTGCCAGAGATATCAAGCAAGGTAAAAAATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTATCAGCAAGCGGCTCTAAAGTTATGGTCGTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCCAGCAACTTTAATGTCAGAATCCACCACATTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTGTTTATATCAAAAAACACAAAAATTTTGCTTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACCAATTTCACCGCGCGGACCAGTTTTACCTATCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTTACTGCTTTGTTACCTCAGTTGTTTGAGCCAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTACATCTTGTCAAGCAATTATTTAAAAAAATA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATGTGGAGCTACTTCAGTAGCCATCCTTGATGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAACAATAACATCTTATCCCGTAATAGCTTGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAATTTCACTCAACTTAGTACAGTCGCTAGTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGTGGACGTAGTGATATTGCTCCAGCTTCTCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC

>NZ_AP018255|21|7|5752696-5753691|PILER-CR
	ATAATAGTCGGGTAAAGTGCGAAAATCGTCATCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AGTCAGCATTGCGCTTGGTGGTCGCTACGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGCCCACGCCCTCAACTATAAATCTACTTCTAATTG
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	TCTTACGCGAACGTGTAACTGTCCGAAGAATCTC
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	AATGTGTTGAAGCGGGGGTGATAGGCTGTAAAGGTA
GTTTCAATCCCTAAAAGGAATTTTATAAAGTTTAAAC	ATTGTTGATGGTAAAGTTGAGTCAGTTAAAAGAGAGTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CCGATAAGCCATTTTTACTTCAGCCTCATTTGCT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATAGTAGTGTTCAGTTGAGCAAGTTAATTGCTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATATCCCAGCGCGAAGAATCTATCATATCCAGTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGTGGCGCCACTACTTCAGTTTTAGATTCTGTTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATAATGAGTCTTGATTATGAAGGCTAATTTCTGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CATAGACGATAAAATGAGTTACATGCCCGATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTGACTAGCGCCAATTAAAACAGCGCGTCCAGCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCGCAGCATTGTTAAAAACTAAAGCGTTTGCA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCAATTGGCAGTTTCTTTACCAATTTATTTAGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACATTACGCACTCTTAAGAGAGTCGGCGCATAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTCACTTATTTAAATACTGCACTACTTCGCTCCACAG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTATTAAATGGCGAGTATGGACGAGCTACAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TGAACTACGATATAGCGAGTCGATGATAATTTTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTTGATCCAAGGTGAGCGCAATCCTTACAGATAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTAAATATCGCTTGGCACGTTGCCTATGAATTGCAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCATCGGTAGAATTAGCTCCTTACCCCAAACTTCAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCATGTACGAACTTGTTTTAAGCATGTCCAAGAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAAACACACCCTCTGTGTACAGTGCCAAGCTACC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTAAGCAACTTGAGTTACTCGCTACCCTACTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACGATGATTATCTAACGCACAAAGATAAAGCGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GATACCAAACTTGCAGATGATATTGGAATGTAC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTGGATGGTACAAATCAGCAGAAACATGGGATAATAGCGAT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTAATTACTTATTTAGGGAGATTGATTGTGTTTTC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCAAATGCTTTAGGCAATGAAAAGCAAGCAACTATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTATTTTTAATAAAGGACTTCATACAAACAGCTGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCACAAGTGCATGATTATCCTGTAGATGTACATAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGTCCTTGCCTTGATTTTAAGTCAGTGGCGCCAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAGCTGCATTATTGAGTCTTGTTAACGCCTCAGCAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TACTAACCAGCCAAGTACTGGAATGTATTTTACAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GAGCCATCATTACCGTCAATGCCTCCTTCTATTGAATTAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCGAAGCGGAACAAGCGCGCAAAAAAGTGATTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	CTGTGAAAATGTATTTTGTTTCGGGTGCCTCTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTACTACTGCATTCACTTTGATAGCCCAATAGG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATTTCTGAATCAAATCCCTATTGCTCTGCTTAAGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCTATCAAGACAGCGAACAGTTCAAGCAGTAAAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAAGCGGATACGATTCTAGAGTACTTAGTTAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTACTCAATTTTCTTGCTGACAATCATCATGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATGGTAAGAAAAAACATAAGCCTGTAAAAGTTG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACTTGCAAAAGAAGCGCGATTTACTAACATTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	AAAATTTACGTAAGGGGTAATTAATGCCTTACTTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACGAGGTTGCATTAGTCAATTCAAAACGTGGTAAAGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAACCCTGTAATCATGCTGTTCTTCCCTACGTTGTACTTGTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGAGCTTCTATGTCATTAATGTATTGTGTTAGTTCATGCTGTTCTTCCCTACGTTGTACTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATATCAAAGAATATATAGGGCAGGGTATAATGT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCTCTTGCCAGAGATATCAAGCAAGGTAAAAAATT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTATCAGCAAGCGGCTCTAAAGTTATGGTCGTAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TCCAGCAACTTTAATGTCAGAATCCACCACATTA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ATTGTTTATATCAAAAAACACAAAAATTTTGCTTGAA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	ACCAATTTCACCGCGCGGACCAGTTTTACCTATCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GTTACTGCTTTGTTACCTCAGTTGTTTGAGCCAAGC
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTCTTACATCTTGTCAAGCAATTATTTAAAAAAATA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TATGTGGAGCTACTTCAGTAGCCATCCTTGATGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	GCAACAATAACATCTTATCCCGTAATAGCTTGGA
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TTAATTTCACTCAACTTAGTACAGTCGCTAGTT
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC	TAGTGGACGTAGTGATATTGCTCCAGCTTCTCG
GTTTCAATCCCTAAAAGGGATTTTATAAAGTTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689304.1\|5738812_5739406_+\|serine-protease	unknown	unknown	gnl\|CDD\|273938
NZ_AP018255.1\|WP_096689315.1\|5757739_5758504_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_AP018255.1\|WP_096689308.1\|5745339_5746851_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|273793
NZ_AP018255.1\|WP_096689302.1\|5737077_5737566_+\|pyridoxamine-5-phosphate-oxidase	unknown	unknown	gnl\|CDD\|200361
NZ_AP018255.1\|WP_096689311.1\|5753953_5754079_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|378256
NZ_AP018255.1\|WP_096689301.1\|5736290_5736869_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_AP018255.1\|WP_096689313.1\|5755314_5755662_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236608
NZ_AP018255.1\|WP_096689317.1\|5761096_5762758_-\|phospholipid-carrier-dependent-glycosyltransferase	unknown	unknown	gnl\|CDD\|224720
NZ_AP018255.1\|WP_096689306.1\|5740526_5741456_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689303.1\|5737794_5738718_+\|serine-protease	unknown	unknown	gnl\|CDD\|273938
NZ_AP018255.1\|WP_096694250.1\|5760330_5760876_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|181235
NZ_AP018255.1\|WP_096689318.1\|5762949_5763594_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_AP018255.1\|WP_096689316.1\|5758935_5759691_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226975
NZ_AP018255.1\|WP_096689307.1\|5741462_5741894_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689314.1\|5755695_5757609_-\|transketolase	unknown	unknown	gnl\|CDD\|235639
NZ_AP018255.1\|WP_096689312.1\|5754336_5755104_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226983
NZ_AP018255.1\|WP_096689305.1\|5739402_5740029_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP018255.1\|WP_096689309.1\|5747179_5747902_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018255.1\|WP_096689319.1\|5763868_5764384_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689310.1\|5747965_5748985_-\|DUF1016-domain-containing-protein	PD-DExK	COG4804_PD-DExK_CAS-I:CAS-III	gnl\|CDD\|377634

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689304.1\|5738812_5739406_+\|serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.06183e-31
NZ_AP018255.1\|WP_096689315.1\|5757739_5758504_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.07195e-78
NZ_AP018255.1\|WP_096689308.1\|5745339_5746851_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|273793	TIGR01766, Putative_transposase_MJ0751, transposase, IS605 OrfB family, central region. This model represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by pfam01385, and other proteins. [Mobile and extrachromosomal element functions, Transposon functions].	3.02041e-07
NZ_AP018255.1\|WP_096689302.1\|5737077_5737566_+\|pyridoxamine-5-phosphate-oxidase	gnl\|CDD\|200361	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ. Members of this family are heme utilization proteins, typically designated HutZ. They are members of the PPOX family (pfam01243) and, except for the lack of an N-terminal extension, are closely related to one form of heme oxidase (1.14.99.3), HugZ (TIGR04109). Members typically are found in a three-gene operon with radical SAM enzyme HutW and a protein of unknown function, HutX.	4.52788e-47
NZ_AP018255.1\|WP_096689311.1\|5753953_5754079_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	8.52867e-12
NZ_AP018255.1\|WP_096689301.1\|5736290_5736869_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	5.2191e-40
NZ_AP018255.1\|WP_096689313.1\|5755314_5755662_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	3.61438e-17
NZ_AP018255.1\|WP_096689317.1\|5761096_5762758_-\|phospholipid-carrier-dependent-glycosyltransferase	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.93165e-34
NZ_AP018255.1\|WP_096689303.1\|5737794_5738718_+\|serine-protease	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.50009e-42
NZ_AP018255.1\|WP_096694250.1\|5760330_5760876_-\|adenylate-kinase	gnl\|CDD\|181235	PRK08118, PRK08118, DNA topology modulation protein.	4.13584e-20
NZ_AP018255.1\|WP_096689318.1\|5762949_5763594_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.09113e-11
NZ_AP018255.1\|WP_096689316.1\|5758935_5759691_+\|hypothetical-protein	gnl\|CDD\|226975	COG4627, COG4627, Uncharacterized protein conserved in bacteria [Function unknown].	7.18665e-06
NZ_AP018255.1\|WP_096689314.1\|5755695_5757609_-\|transketolase	gnl\|CDD\|235639	PRK05899, PRK05899, transketolase; Reviewed.	4.34708e-41
NZ_AP018255.1\|WP_096689312.1\|5754336_5755104_+\|hypothetical-protein	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	2.67713e-15
NZ_AP018255.1\|WP_096689305.1\|5739402_5740029_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.18483e-48
NZ_AP018255.1\|WP_096689309.1\|5747179_5747902_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	5.64418e-34
NZ_AP018255.1\|WP_096689310.1\|5747965_5748985_-\|DUF1016-domain-containing-protein	gnl\|CDD\|377634	pfam06250, DUF1016, Protein of unknown function (DUF1016). Family of uncharacterized proteins found in viruses, archaea and bacteria.	5.13756e-83

>NZ_AP018255.1|WP_096689310.1|5747965_5748985_-|DUF1016-domain-containing-protein
MNKPIPEEYGSLLLEVKQRIRSAQYEALKAVNKELIALYWDIGKIIVGRQQSNSWGKSVVEQLAKDLQTEFPGISGFSAANLWRMRLFYESFANNEKLAPMVREIGWTHNIVILEKCKDDLEREFYIRMTKKFGWTKNVLIHQIENQTYEKTLLNQTNFQQTVSQEIRNQAKLAVKDEYIFDFLELADEHSEYQLEKAILARVEPFLQEMGGMFAFMGSQYRLEIDDEEYFIDILLYHRLLKCLVAVELKIGKFLPEYIGKMQFYLAALDDKVKQPDENPSIGIILCKSKSQTIVEYALRESNKPIGVATYQIVSTVPQELKNKLPAPEQVSKLLEGIE
>NZ_AP018255.1|WP_096689309.1|5747179_5747902_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPHSLVLNLLPQSSIYPQFLTGRHYHALFLNLVSSVDKSLGDILHDTTIDKAFTLSPLQIYCRQTSLKSNSLQWQHQEPIQPGTPCWWRLSLLDDTLFSKLTKLWLNINPEKAWHLGSADLFITSILATPQSSQPWANACTYAQLYEQASGAERNINFTFATPTAFRQGSFDTALPSKESVFKSLLQRWNKYSGIEISNDIIECIFPSFFNIRTEIASDSRSKFIGCVGLSAVTQNHRIS
>NZ_AP018255.1|WP_096689308.1|5745339_5746851_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MRKQTYVKQIHTNTDTGLFLADYAAISTYASIFSLKGLLSNQKKSELNTTLQKKYAINKRQASSIIAFIEGEIKSARDSLARHIQTLESKIKSLKSSIDTLEKKVKKHIEYLKTVAKYNSTKKQGKKAKISSKYQPQFDEASSRVFGRESGTYYQSAKNKLHNQKRKLHRMVCQLKHLKSKQLHVNLGNKETIYFVGSKDESNGNQVCQLILGLEKDSLDILKIRVPYALESRYGEYVEIPINLNGYGDKEIRAAWACGQAITYRIIQRKYGVWSAHITVDVYQPITSDSVMLGCIGVDLNINSVAWCKVNADGNPKRFGDIKFNLHSLSTNQTEAVLAEVVTELTTLALAFKCPIVIEELDFDGKKARLNNGAKYKRYNRMISGFAYNRFYELLSSRCFKLGIKLITVNPAYSSLIGMTKFMSLYGMNSGTAAALVLARRAMNYSEGVPARAAYEGMEHKKHVWSHWNVLSKRVKGIARHSFFTPRPTASSSLRNGYIEKYP
>NZ_AP018255.1|WP_096689307.1|5741462_5741894_+|hypothetical-protein
MIGGDKINAYLGTDFTRYTNDGWTFSGGAIGYTNPDNDYYSQVSGSISKKISLGKNSNLVLSTGLNYAIDRKAEIDQFVVKSPGSSITLGARANLGNVSLGLVNYFGDILPNSIANTLLADVSWNLSKNFLISGILYSHKRKF
>NZ_AP018255.1|WP_096689306.1|5740526_5741456_+|hypothetical-protein
MRNIKWHSENNSINKDTLFPSRIFQTSKFGDVVSPESVEAMKQPGFQMGANGEQYGIDLYFPNTGSTYGNAQSNQTSISRAENIENTPVGIYSTVRRIVRANDKEAVIGRTVRGFGAIGGDKNALLNSAFQLTGLLLPDADPQIEGSNKPFNKNINVNLFFAANNARLPENSYSFYHSGIGKAKSPYLDANNVNQVPAATFDSIWIGVSPVKKYSFSSKSRYELTGSTKTLSAAGTEGGLDTNVNIAANINGQNFSNYLMKDFYSQIYLQVFSQDANLRTTTKFTEETNYYPHISMSGNITTQNNVWRY
>NZ_AP018255.1|WP_096689305.1|5739402_5740029_+|response-regulator-transcription-factor
MIRVLVVAASPVVRVGLAAVLASSPKFQVFTSGADIDILTKIAEQQPDVLLLDWNDNREFWDTLLQSQHSIPIIVITSNDQLDINFMLRAGVRGILSPEARESEIMLAVETVAAGMVVFHPEMIDYLLAASSLSTEAMPTNPTQVLTPREIEVLQLLASGTGNKAIAQNLHISEHTVKFHISSIFQKLNVSTRTQAVAVGIRLGLVMF
>NZ_AP018255.1|WP_096689304.1|5738812_5739406_+|serine-protease
MVSTVLTYISTELTSIAQQLRQNTVKVRINNESAGSGVILRSDGVIITNAHVATSKRAVVELWDGRVVEAVRTKIDPTVDLATLQITVDNLDAAIIGNVSNLRVGELVLAVGNPFGDTGVVTVGMVSCLVPYINKSVQKTYSSVLADITLHPGNSGGLLADCYGRVIGINTMIVYGAAVAIPVSTVENFLNSAAEVI
>NZ_AP018255.1|WP_096689303.1|5737794_5738718_+|serine-protease
MSISSNAPNLLLSLSQSLADIVELSAGAVVSVNAGRRFSPSGIHWRNGIIVTSDESLHNVEDITVTIRGGKTVPAKLLGRDASTDIAVFQISNPDIPVANIGDATTLKVGHLVLGMALSREGDIKAAMGTISVCSGTWKSMSGGNIDQFIRPDITLYPGFAGGPLVDANGNVVGMNTSGRRATALTIPSETVNRVVDQLVAKGRIAKGYLGVGMQPVRLPKNLLSSLNLSSDGGVIVVNIDNNAPAEQAGILLGDILITFDGARVQDTNDILGYLNQGQSVNQSVSVQIIRGGELVNLTVTVGERPF
>NZ_AP018255.1|WP_096689302.1|5737077_5737566_+|pyridoxamine-5-phosphate-oxidase
MSQFEAIQTAYQIFTDQFQSAVICTVSEDGLPNASYAPFVIDDMKNIYIYVSGLSTHTQNLNVKPLASVLFIEDESKTQQMFARRRLSYDCTASLVNSNTATWIQIVSDFESRFGNIIQVLRDLPDFRIFQLTPTSGRFVVGFGAAYDVDASDLNKLIHVTG
>NZ_AP018255.1|WP_096689301.1|5736290_5736869_-|L,D-transpeptidase
MRTWNLVKGLIAFAPLISIVSTTLLLSDSSHAVVVASSQKAPASVSTDKPKKPGQEIETEPAANEIHLVVKLRAKIVYVYRGPEIIATYPIAVGKSGWETPKGIYHVFEQEINPIFKSFKTGRIIQPGPENPLGPRWIGIWTDGKSRIGFHGTNQPQFIGQAVSHGCIRMHNKDVIALFDKVKVGTVVKVEP
>NZ_AP018255.1|WP_096689311.1|5753953_5754079_-|CRISPR-associated-endonuclease-Cas2
MFVVISYNVPSDRRRIKIHKTLKSYGQWMQHSVFDTTVFFA
>NZ_AP018255.1|WP_096689312.1|5754336_5755104_+|hypothetical-protein
MVRQVTEFDAADDLVIYPETDGEPMAQNTLQFIWIVIIKEGLEILFASNPDVFVAGDLFWYPIAGDIDTKYAPDAMVVFGRPKGRRGSYVQAREGNIAPQVVFEILSPGNRKKEMDDKFDFYQKYGAEEYYVYDPDKNILKGWLRSKKTLKPINKINNWVSPRLQIKFVLTPETLEIYRPDGRKFVTPVELDEMYEQAQQRADAEKQRADAEKQRAETERQARLNAVRQLLQTGMSIEQVAQIFSLTVQEVEEQL
>NZ_AP018255.1|WP_096689313.1|5755314_5755662_+|RNA-polymerase-sigma-factor
MSDERDLELIFQSQQGNKAAFGLLVSRYQPMAQRLAIRVMGNKDLAQELVQEAMLQAYLSLEKLNDPTRFKSWLYGIVLNVCVGICNKIISGEIPPSPVPQEKVEKLMDSGKLSD
>NZ_AP018255.1|WP_096689314.1|5755695_5757609_-|transketolase
MTTTNIQFPINLGAYKYISLNPANGTLTAEDREALKANIQLCRDAIVFFTATGAARGVGGHTGGPYDTVPEVMILDAFFRGAADKFVPIFFDEAGHRVGTQYLMSTLHGDLPEQQLLRYREANSKLPGHPELGLTPGVKFSSGRLGHMWPYVNGVAMAHPGKTVFCLGSDGSQQEGNDAEAARLAAALHLNVKLIIDDNDVTIAGHPSKYLPGFTVAKTLTGHGIKVLEGDGEDIDDLYRRLCEAVNTPGPIAVINKRPMCPAIEGLEGSTHGHDVISVDLAVKYLEARGHSAAVEYLNNIEKPKQTYTFLGSSDKWGANRNVFGEAVVNILSRMSEAERKEKVKVIDSDLEGSCGLKKIHDAYPEVFVPSGIMERGNFSAAAGFGMERGKQGIFATFSAFLEMCISEITMARLNYSNVLCHFSHAGIDDMADNTCHFGLNNMFADNGLDDGHPTHLYFPADTNQMTACVEAIFSDPGLRFIFSTRSKVPTIKGSDGNELFGDNYKFVPGKDEVVREGTQGYIVSFGDALYRALDAVERLKQEGIDVGLINKPTLNVIDEEMIAKIGKAPFVLVVEAFNRRTGLGSRFGSWLLERGYTPKYNYLATHKEGCGGLWEQFPHQGIDPVSIINQVKNLIK
>NZ_AP018255.1|WP_096689315.1|5757739_5758504_+|DeoR/GlpR-transcriptional-regulator
MLTAERRQFILEILRRDKKVLSSELSAVLKVSEDTIRRDLRELAETGLLKRVHGGALLTSPATASYADRIQQAPIEKEAIARAAASLVRPGQVVILDGGTTTLQVARHLPKDLEATVITNSPPIAVALAEYAYIEVVMLGGQLYKKALVNIGAATVEALQMIRADLCMLGVCSLHPEIGISVTNLNEAHVKRAMMKSAAEVVGLVTAAKLDTAAPYVVGSIHALTYLVTAPVVPLNVLTAYKALGLTIIREDYV
>NZ_AP018255.1|WP_096689316.1|5758935_5759691_+|hypothetical-protein
MGISMDVKLDFTAEERKILLEEMQILEHNISIFDWGLRGFRTYASAVFTLPLTNFMQTIGYNKKKLVDLNKSDKVILNIGCRDDTNNDYINAELFPSLGEMWRILRGKRRIEYDLFLNICYEDKNLLEVADGIILSHVLEHIPLNLALVALKNCFKYLKKNGCIRICVPYLGRYQQPLNTSYEKAKNMLAVNTIIYCYGHKVMYNVELLKLLMAEVGFSQIEEVNFQEGLLGMSDLPERQPESIYLTGIKI
>NZ_AP018255.1|WP_096694250.1|5760330_5760876_-|adenylate-kinase
MKKVAVFGNTGGGKSTLSKRLSEITNLPLHPLDKIQYQSGGAEVPHEDYKRAHQKILLTDQWIIDGFGCMETVWQRLDEADSLVFVDLPLHVHFWWVTKRLLTSKFKPPEGWPEKSPILKSAINCYRTLWLCHKYLTPRYRKYIEQAQSTKSVYHIKSIEQISQFLESITNDTNFEDVTPA
>NZ_AP018255.1|WP_096689317.1|5761096_5762758_-|phospholipid-carrier-dependent-glycosyltransferase
MLHLDQNIRPLWLKLQSRQSHYVALLIWILPLLLFGSGNNSLMAHDEGLYAIRARVMLDSGEWVHPWTSPHHKTPGIYWIIAVFYKLFGVNEFAVRLPSMILGTLSIFILYEIGRIILYKKIAWLAAAIFSVEFLWLQYCRLGTPDVSMVFLVLLAILLLLKAEIYLKNYPKRYINYNTLCFLGGFCFGLALFVRSLMIVLPIIALLPYLIDVSRRQRLLKNPAFYFGFLVGLIPTIIWLWLNYLHYGSGSLSQLLNFALQVGSKERNGNGIIFYMWNVPAKSFPWFFFALLGLFIVIRRQSVEYKSLLVGFPVVLFAELSLVSTRLSHYSLCLFPFIALLAAVGLDALTLGVTGKINRQSKDGSTLLLKTSIKRYLSYGFGIIGIFLIITGVITLFIGNPEIHKYTTLILVVGAGWLILPIVWINRHRYKARAFFNYWLAGWLIPVWLGLAVLGYNGAFSDYNPEFRSFIQSQTVAPILQSSAVSLVDVSGKTGVLINFYTKNIAERVDSFREVSPNNYAWIEESKINESANSRILYRVIGKVKQYSLVQVL
>NZ_AP018255.1|WP_096689318.1|5762949_5763594_+|class-I-SAM-dependent-methyltransferase
MLLRPNERTKLDDSDDKLFYSEPRFVTHVDEGFIQQLTDLYRQLLKPNTRVLDMMSSWVSHLPEEIQFSHVEGHGLNAEELARNPKLNHYFVQNLNENPKLPLQDQDFDAVINCVSVQYLQYPEAVFSEIHRILKPGGVVIFSFSNRMFYQKAIEAWRENTEKGRVELVKSYFQNVPGFTPPEVIARQSQVPNLLQWLGAGGGDPFYAVVAYKQ
>NZ_AP018255.1|WP_096689319.1|5763868_5764384_+|hypothetical-protein
MSFPRIRRILAALLLSLLLITSTTACATKAPGRFDTAQQESSRQRSGQAVAKNATQGSEFNKLFPSDGGGYDVVFTQEKKGFSEANLKKDGKVVAQLAVSDTTSTPTTAKSYSNSTKTIAGYPAKTLGKTKTSILVGKYQVSAISKDPSFTESDREAWLQKFNLAGLSRLK

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Crispr_ID: NZ_AP018255_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_22

5945704-5945784

TypeV

A:N

Consensus_repeat	Method
ATTCTTTACCAGGATATAGATAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_22

>merge|NZ_AP018255|22|5945704-5945784|CRISPRCasFinder
ATTCTTTACCAGGATATAGATAAACCTCGTAAGGGCGGGTTCACCTAAATTTTGGATTATTTACCAGGATATAGATAAACC

>NZ_AP018255|22|21|5945704-5945784|CRISPRCasFinder
ATTCTTTACCAGGATATAGATAAACC	TCGTAAGGGCGGGTTCACCTAAATTTTGG
ATTATTTACCAGGATATAGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096694260.1\|5957635_5958166_+\|vitamin-K-epoxide-reductase-family-protein	unknown	unknown	gnl\|CDD\|377937
NZ_AP018255.1\|WP_096689465.1\|5938960_5940334_-\|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA	unknown	unknown	gnl\|CDD\|225963
NZ_AP018255.1\|WP_096689474.1\|5953058_5953727_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689477.1\|5958552_5959116_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_AP018255.1\|WP_096689476.1\|5956789_5957371_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|274927
NZ_AP018255.1\|WP_096689475.1\|5954349_5956647_-\|ribonucleoside-triphosphate-reductase,-adenosylcobalamin-dependent	unknown	unknown	gnl\|CDD\|274169
NZ_AP018255.1\|WP_096689466.1\|5940557_5942087_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_AP018255.1\|WP_096689467.1\|5942153_5943299_-\|transaldolase	unknown	unknown	gnl\|CDD\|235117
NZ_AP018255.1\|WP_096689473.1\|5951893_5952985_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_AP018255.1\|WP_096689461.1\|5934945_5935605_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|215072
NZ_AP018255.1\|WP_096689472.1\|5950266_5951691_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694259.1\|5946182_5947373_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|224182
NZ_AP018255.1\|WP_096689471.1\|5949286_5950270_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_AP018255.1\|WP_096689464.1\|5937430_5938777_-\|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl\|CDD\|234896
NZ_AP018255.1\|WP_096689463.1\|5936918_5937116_-\|lasso-peptide	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689468.1\|5943431_5944481_-\|class-1-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236458
NZ_AP018255.1\|WP_096689469.1\|5944784_5945096_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|240845
NZ_AP018255.1\|WP_096689470.1\|5945863_5946073_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689462.1\|5935741_5936587_+\|S-formylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|131868
NZ_AP018255.1\|WP_096689460.1\|5934095_5934767_-\|DUF1997-domain-containing-protein	unknown	unknown	gnl\|CDD\|370453

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096694260.1\|5957635_5958166_+\|vitamin-K-epoxide-reductase-family-protein	gnl\|CDD\|377937	pfam07884, VKOR, Vitamin K epoxide reductase family. Vitamin K epoxide reductase (VKOR) recycles reduced vitamin K, which is used subsequently as a co-factor in the gamma-carboxylation of glutamic acid residues in blood coagulation enzymes. VKORC1 is a member of a large family of predicted enzymes that are present in vertebrates, Drosophila, plants, bacteria and archaea. Four cysteine residues and one residue, which is either serine or threonine, are identified as likely active-site residues. In some plant and bacterial homologs the VKORC1 homologous domain is fused with domains of the thioredoxin family of oxidoreductases.	7.12367e-10
NZ_AP018255.1\|WP_096689465.1\|5938960_5940334_-\|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA	gnl\|CDD\|225963	COG3429, COG3429, Glucose-6-P dehydrogenase subunit [Carbohydrate transport and metabolism].	8.02334e-115
NZ_AP018255.1\|WP_096689476.1\|5956789_5957371_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|274927	TIGR04026, hypothetical_protein, PPOX class probable FMN-dependent enzyme, alr4036 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily described here is widespread in Cyanobacteria and plants, and is named for alr4036 from Nostoc sp. PCC 7120. The family consists mostly of proteins from species that lack the capability to synthesize F420, so it is probable that all members bind FMN rather than F420. [Unknown function, Enzymes of unknown specificity].	4.02372e-90
NZ_AP018255.1\|WP_096689475.1\|5954349_5956647_-\|ribonucleoside-triphosphate-reductase,-adenosylcobalamin-dependent	gnl\|CDD\|274169	TIGR02505, RTPR, ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent. This model represents a group of adenosylcobalamin(B12)-dependent ribonucleotide reductases (RNR) related to the characterized species from Lactococcus leichmannii. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA. This is the rate-limiting step of DNA biosynthesis. Thus model identifies NrdJ enzymes only in cyanobacteria, lactococcus and certain bacteriophage. A separate model (TIGR02504) identifies a larger group of divergent B12-dependent RNR's. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_AP018255.1\|WP_096689466.1\|5940557_5942087_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_AP018255.1\|WP_096689467.1\|5942153_5943299_-\|transaldolase	gnl\|CDD\|235117	PRK03343, PRK03343, transaldolase; Validated.	0
NZ_AP018255.1\|WP_096689473.1\|5951893_5952985_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	3.2632e-14
NZ_AP018255.1\|WP_096689469.1\|5944784_5945096_-\|RNA-binding-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	4.96515e-31
NZ_AP018255.1\|WP_096694259.1\|5946182_5947373_-\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	8.05772e-81
NZ_AP018255.1\|WP_096689464.1\|5937430_5938777_-\|cobyrinate-a,c-diamide-synthase	gnl\|CDD\|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NZ_AP018255.1\|WP_096689477.1\|5958552_5959116_-\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	6.56036e-35
NZ_AP018255.1\|WP_096689461.1\|5934945_5935605_+\|NAD(P)H-binding-protein	gnl\|CDD\|215072	PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional.	2.47302e-70
NZ_AP018255.1\|WP_096689468.1\|5943431_5944481_-\|class-1-fructose-bisphosphatase	gnl\|CDD\|236458	PRK09293, PRK09293, class 1 fructose-bisphosphatase.	0
NZ_AP018255.1\|WP_096689471.1\|5949286_5950270_-\|AAA-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.04105e-23
NZ_AP018255.1\|WP_096689462.1\|5935741_5936587_+\|S-formylglutathione-hydrolase	gnl\|CDD\|131868	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. [Cellular processes, Detoxification].	5.59728e-169
NZ_AP018255.1\|WP_096689460.1\|5934095_5934767_-\|DUF1997-domain-containing-protein	gnl\|CDD\|370453	pfam09366, DUF1997, Protein of unknown function (DUF1997). This family of proteins are functionally uncharacterized.	7.11807e-61

>NZ_AP018255.1|WP_096689469.1|5944784_5945096_-|RNA-binding-protein
MTIYVGNLSYRATEADLRAVFADYGEVTRVVLPTDRETGRMRGFAFVDMNEDAQEDTAITELDGAEWMGRQLRVNKAKPREGGGGGGGGNRKGGWAGKQEAYE
>NZ_AP018255.1|WP_096689468.1|5943431_5944481_-|class-1-fructose-bisphosphatase
MATASEYKDLSMVGAANDGLDRDCTTLSRHVLQQLQSFSPEAQDLSALMNRIGLAGKLVARRLSRAGLMEGVLGFTGEVNVQGESVKKMDVYANDVFISVFKQSGLVCRLASEEMDEPYYIPENCPVGRYTLLYDPIDGSSNTDTNLSLGSIFSIRKQEGEDLDGKASDLHSSGRNQIAAGYILYGPSTMLVYTIGRGVHSFTLDPSLGEFILTEENIKIPDQGSVYSVNEGNFWQWDESIREYVRYVHRTEGYTARYSGAMVSDIHRVLLQGGVFLYPGTVKKPEGKLRLLYETAPLAFVIEQAGGRATTGTMDILDVVAEKLHQRTPLIIGSKQDVAKVESFIQKSH
>NZ_AP018255.1|WP_096689467.1|5942153_5943299_-|transaldolase
MSTNHLLEIKNYGQSIWMDNLTRDIIKSGELKNLVENQGICGITSNPAIFEKAIYGNAIYDADIEAGVRAGLPTYKIYESLVFEDIRNACDILRPVYDATDGLDGYVSIEVPPTIAHDTEATIKEARRYYSEIGKDNVMIKIPGTEAGLPAVETVISEGINVNVTLLFSVQSYVNCFWAYIRGLEKRSAEGNPINKISSVASFFLSRIDSNIDAKIDATLKKGVPDIAVDAKLRAVKGKVAIANAKIAYQEYKKIVQDERWKALAAKGANVQRLLWASTSTKDPSYSDVMYVDQLIGPETVNTLPPATIEACSDHCDVASRVESDVDEAYNLIDSLKDPDINIDINTVMDELLTDGIDKFVKPFESLMNSLEDKIKLLSPV
>NZ_AP018255.1|WP_096689466.1|5940557_5942087_-|glucose-6-phosphate-dehydrogenase
MVSLLENPLRVGLQQQGMPEPQIIIIFGASGDLTWRKLVPSLYKLRKERRIPPETTIVGVARREWTHEYFREQMRKGMEEAHGGVHPEELWQDFAQGLFYCSGNTDKPEDYQKLKKLLTELDEKRGTRGNRMFYLSLSPNLFAEAIKQLGNAKMLDDPYKHRLVIEKPFGRDLASAKSLNVVVQKNCKENQVYRIDHYLGKDTVQNLLVFRFANAIFEPLWNRRFVDHVQITVAETVGVEDRAGYYESSGALRDMLQNHLMQLYCMTAMEAPNAMDAESIRTEKVKVLQATRLADINNLDLSAIRGQYSAGWMKGKQVPGYREEPGVNPNSTTPTFVAMKFVIDNWRWQGVPFYLRTGKRMPKKVSEISIHFREVPSRIFQSAAQQVNANVLAMRIQPNEGISLRFEVKMPGADFRTRSVDMDFSYGSFGIEATSDAYDRLFLDCMMGDQTLFTRGDEVEAAWQVVTPALSVWDASSNPIVVPQYEAGTWEPVEAELLINRDGRRWRRL
>NZ_AP018255.1|WP_096689465.1|5938960_5940334_-|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA
MVSQAPTIYSLQAPKDISLTEIEAELGQIWQSYGMADEDGSLPAATRATTFTLVVYEPEETQQLLAALGFYSGPIDGILGPQTEVALREAQKAYKIPVTGTATPDTLTVLRGEVTKGRASGKISEAVPSTADSKSPRIADEIALRNPCRIVTLSPVAGADEGVKAQVAAYCPIQKQSSGTLVCCEYLTLTGTATALERIGGMIPALLIGGLPKFLWWKATPDPNNPLFKRLSAVCNNVIVDSCNFNEPEKDLLNLQELVENGVPLADLNWRRISGWQELAAQAYDAPNRRAALGEIDRVNIDYEKGSPVQALLFIGWFASRLGWKPVGYQQEKGDYDITKIKFLSNDQRPIEAELAGVPMGEGGQIPGDLIALRLSSTNINADCGTLICSETGGCMRMETQGGAQSTGLFQQVTSLSEQKAEVLLSQQVQRWGHEALLEESLAMTAQILKFGFSTEE
>NZ_AP018255.1|WP_096689464.1|5937430_5938777_-|cobyrinate-a,c-diamide-synthase
MSLIIAGERSGVGKTTVTLALLAYLCKNNYQVQSFKVGPDYIDPMFHRYITGRACRNLDPVLTSEAYVKECFRHHRDGADFSLVEGVMGLFDGIGKETIPFASTAHISKLLNIPVILVVDCSRLSGSVAAIVHGYCTLDPNINIVGVVLNRVGSDRHLDLLNNALAPLQIKVLGVLRREDNISIPDRHLGLVPTSELPELDAIISKLAALGASCFDWEALLPLLEGGGREKEKGGKSLYSVKIAVALDNAFNFYYQDNLDLLEELGAELIFWSPLNDDLPQGVQGMYFGGGFPEMFALKLSNNIGALNNVKAAILAGMPTIAECGGLMYLCDKIIDFENNAWSMVGVLPTQAVMDKRLTLGYRRAVTLQNNFLLDAGKVIYGHEFHRSRLLSNLKAPVFETYRVDSGESTGDEGWSTQFNLHASYIHQHWGNSKEIPQRFLKHCVDFV
>NZ_AP018255.1|WP_096689463.1|5936918_5937116_-|lasso-peptide
MKRSYSVPKLYRHGNITEIIQLAGGGTWNDDLLVNGLPTETKDRGYFDLCQGTSPRANTAVNCIK
>NZ_AP018255.1|WP_096689462.1|5935741_5936587_+|S-formylglutathione-hydrolase
MSLNLTSEYKSFGGKLSFYSHASTTCNIEMRFAVYQPQQAQNQLLPVLYFLSGLTCTEENFMVKANAQKYAAEYGLILVAPDTSPRNTGIQGEVQDWDFGTGAGFYVDATQEPWAKHYKMYSYIVEELPSLIAANFSVDINKQGIFGHSMGGHGALVCALRNPQKFKSVSAFAPIVAPIQCPWGIKAFTGYLGEDKENWRYYDASELVKQYKYHGNILIDQGTNDKFIQEQLKPELFEQACKEINQPLTLRYQDDYDHSYYFISSFIEDHIKHHVQELRFR
>NZ_AP018255.1|WP_096689461.1|5934945_5935605_+|NAD(P)H-binding-protein
MKAFVAGATGETGRRIVTELVARNIPVRALVRDIDKARSILPPNVELVQGDVLEAATLATALGDSTVVLCATGAKPSLDPTGPYKVDLEGTKNLIDAAKGKEIEHFVLVTSLCTSQFFHPLNLFWLILVWKKQAEEYLQKSGLTYTIVRPGGLKNEDNSDAVIMQSADTLSEGSIPRQKVAIVCVEALTEPSARNKIVEIVAKPEAAPKPFGELFAGVA
>NZ_AP018255.1|WP_096689460.1|5934095_5934767_-|DUF1997-domain-containing-protein
MLSKDQEYQALETTETMLSVTSGTVNSEDVIHDNGAKKPTIFYCNYSDCMEMYAPSHIVAQYLDAHPEWFARCAEPMKVQPLEQNGYALVIGRFGAFNYEVEPKIGLELLPPDSEGVYRIRTIPIPDYIAPGYDVDYRASLQLVESRAEDFSRSIEMTRVEWELYLAVDIHFPKFIQRLPQSLIQTTGDRLLNQIVRQVSRRLTRKVQDDFHHSIGVSFPKKH
>NZ_AP018255.1|WP_096689470.1|5945863_5946073_-|hypothetical-protein
MFLDELSPIFKQLVQHPVSFLGGFASGALRLHLADDPVRSWLNQQMGTSYTPPVTNNGKSTGPQSISIE
>NZ_AP018255.1|WP_096694259.1|5946182_5947373_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MKWGERLGWYVNNTWLDLFTELQYTLNAPPGHFPVQWLPDVYIAKPNTDIDISSFPSFVWGGDSWRCLTTLIQKLADCNSNDSAHQLSKFEFDIITVNRHGEEIKRERCQAQYFTEDLGNDVTLEMVAIPSGKFMMGSPEGEGYENERPQHEVFIPSFFMSKYPITQAQWRAVIALPKIERDLNPPSSFKGDNFPIEGVSWYDAMEYCARLSQKTGSLYRLPSEAEWEYACRAGTTTPFYFGKTIIDKLANYNARGTFASEPRGEKRRKTTVVGTFPPNAFGLHDMHGLVWEWCLDTYHDNYEAAPSNGSAWVDQTDQKGKSFEQNQGILSRFGKSRKNILDHRSDNDNQIVLQRLLHGGSWINYPRDCRSASRNWFYPDYVDSNVGFRVVQRGLC
>NZ_AP018255.1|WP_096689471.1|5949286_5950270_-|AAA-family-ATPase
MTSWKIFQGKPENPHNGITRLPDPPNWRRFNTERRSATYQARGEEIELVNAALYLRRPLLVTGKPGTGKTSLAYAVAQELQLGDVLRWNITTRSTLQQGLYSYDAIGRLQDAKGSGQDNLGEIGKYIKLGALGTALLPSQKPRVLLIDEIDKSDIDLPNDLLNIFEEGQYEIPELGRIADVFPEITVQTNNNQTTTITQGKVQCQAFPFIVLTSNGEREFPPAFLRRCLRLDLREPTPQELAAIVKAHLGSDIIEKAQPIIEKFIQRRNQGDLATDQLLNAIYMLTTTDNTDDSPMVDSHNRDNQKDDRKVQLIERLLQYLNATGGI
>NZ_AP018255.1|WP_096689472.1|5950266_5951691_-|hypothetical-protein
MSISGRILKKIVGALTEAFPTREKLVMMLEFELNIAESYVPLASDYQIVVYQLVKKLDSEGKIIDLIEGAYRDNGNQNLQVIKQKIIPIIKLYQILARLEKDFIEQIKIAYKACCPEDWHLDGESSLPNNIQQVLDNLEDMPLGTNDYNQIALFTAYFLVTTGSKLPVAELNKLKKWGEQHVSYFSQLLAKTHLETKERQDKQKYIPSYFLVWLQPSKQYKGRYIVSTWFIADGSSGIDYRTGEGYLQVTKEELNQEQEGFYLKEIPSLLQSLLIQISEQPTLSRLQTTLEFFLPNELLNEPIDRWEIQIDEDDFPCPIGNEYKLNLRSSKRLAQYLYKNDWMHKWEFIQQQNCRECFVPADSYSWQELYSKLNQNSVYALKLINSPSPEIFQVISKTAVPVALWIRQELENLDIQAELKGLLKCSIPELPQRVREKRNDSFGKDKQSHIGHHISLLWENPNVLPPQIEYTLPS
>NZ_AP018255.1|WP_096689473.1|5951893_5952985_-|trypsin-like-peptidase-domain-containing-protein
MKLTGTQYKQFTQALLEAFPSQQRLTELVQYKFGKNLNVIAMGADLQEIVFKLIQASQAEGWTDKLIAGARESNPHNPTLFAFAQEFNLAVSMPSELSARGALERLIKKTNSFLDINTWREKLGKIETQVCRVEVIKTNNTKEFGTGFLIAPNVVMTNYHVIEAVDLGNANPSNVILRFDYKQLADGKVLNQGTEYKLLKDDWLIDKSPYTENTLPTPDELDYALLRIDGTPGEDTVSKDDPNSPARGWIELPTQPYEFLPDTSLFIVQHPNAHPLKLAFDTEAIIGINENGTTVKYKTNTESGSSGSPCFDINWNLVALHHSGSPDWNPTYNAGTPITAICVRLQKQKQGLLEDIRSGQAMW
>NZ_AP018255.1|WP_096689474.1|5953058_5953727_-|hypothetical-protein
MIEQEWLIDESVAEPVSRGTSRESASIPEPINLAIRLQDIFIWDTKKWFGDAEMRLDALVVHGNATEGQQASTYTPQTFRFPGVKSGDRLPTGENGLLIFYGQALHFLDIFITVSRDRKDSDDLATLLNEQLQSKEFQGATATLLGLAIAAPQVATVTGAMGAATVLGNLTYQALRKVTSDTVGLYRTSWLQNRDNFGIGRHPKRDVHLVKDLSFWYEIIKE
>NZ_AP018255.1|WP_096689475.1|5954349_5956647_-|ribonucleoside-triphosphate-reductase,-adenosylcobalamin-dependent
MVRELERKPQSAEFPVTAPAANPVFFRTYSRRNDLGMRESWSRVCDRTIKGLVELGKLTPQEAELLTKMERSIKALPSGRWLWVGGTEWIKKPRNFSGGYNCTSTNLEDWKAFGLMMDLAMMGCGTGAILEPKYINKLPPIRNKLNVILQGEIGATPVQLRREETFVKIEANQVTIYVGDSRIGWVKSYQTILELSTDNRFTDEVKVIVDLSDVRKAGETLKGFGGVANPVKLPELYTNCASILNKAIGRQLNSVECCLLIDQAAVTIVAGNIRRSAGIRQGASNDTLFADAKANLWQQDAEGNWRIDPERDALRMANHSRVYHYKPTLEECIDAVRKQYYSGEGAIQWAGEAVARSNCDLLSTKELKIDFLKAYEKGQAKQWLQERHPNIDDNEIEHRLGRFGLNPCGEIIGSNFFCNLAEVHLNLLDPDNYREQEEAFTAGALSVAALLHHKFLEPRYQYSRELDPIVGVSFTGLFDFFVHALGVEWLRWWEQGRPETPQGLTFKAKEQEYLTRWKEIVHKVVWQYCDKHGLKRPNRCTTVQPSGTKSLLTGASPGWHPPKAQRFIRRITCRKNDPVALACLDYGYTIVPSQSDKDENGNLLHDPFDPRCTEWLVEIPVAVSWADLPGASEIDISKFNALAQTDFYMQVQKHYVTHNTSATIELRENEIEILGTRIYEAIRDDEGYISAALLARFDDLQTFPRLPFEPISKDKYEQLSQEVERRRKTDDFYAALSRYDFGEMSEAGPAGCDSDKCMMPEQSPN
>NZ_AP018255.1|WP_096689476.1|5956789_5957371_+|pyridoxamine-5'-phosphate-oxidase
MTLPNWRQILIGVLHRNRKQPYSRYFQLATVRTDGYPANRTVVFRGFLNNTNQLKIIVDSRSEKINQIQHQPFAEACWYFTETREQFRLAGKLTLVGADCDDAELEKARVSTWQELSDNARIQFAWAHPGEKRANPEAFAPSQPDAVTPLANFCLLLLDPVKVDHLELRGEPQNRYLYTRDEQENWTCIEINP
>NZ_AP018255.1|WP_096694260.1|5957635_5958166_+|vitamin-K-epoxide-reductase-family-protein
MEPAQLSQELRQGKNPNMSRRRAIIGLSMLGGSMGQLVTLYQTGIISHLPDPPVPIFNADKVDASNYAYKRFNAPDGPLMIATYALTAWLASMGGLERARRNPLIPIAMGIKILFDCATNVQLAREEWQENKALCEYCQVASVCSFASLALALPEVILASRVLLGKEDKKAPVGDT
>NZ_AP018255.1|WP_096689477.1|5958552_5959116_-|Uma2-family-endonuclease
MVQTPAKPLTLEEFLQLPETEPASEYINGQIIQKPMPQGEHSTIQTELASTINIALKPQKIARAYTELRCTFGGRSVVPDISVFTWERIPRQPSGRVQNVFSIAPDWTIEILSPEQSQTKVTKNISHCLKYQTQMGWLIDPDEESVLVYLPDRLVEIYDEPTQQLPVPSFANAFQLTVGELFAWLME

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Crispr_ID: NZ_AP018255_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_23

6276543-6276661

Orphan

A:N

Consensus_repeat	Method
TCCGGTTGTTTACCAGGATGTAGGTAAACCCGCCCGTACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_23

>merge|NZ_AP018255|23|6276543-6276661|CRISPRCasFinder
TCCGGTTGTTTACCAGGATGTAGGTAAACCCGCCCGTACAGTCGGCGCAAAGTTAGTCGGGGCGGGTTAACCAAAATTTCCGGTTGTTTACCAGGATGTAGGTAAACCCGCCCGTACAG

>NZ_AP018255|23|22|6276543-6276661|CRISPRCasFinder
TCCGGTTGTTTACCAGGATGTAGGTAAACCCGCCCGTACAG	TCGGCGCAAAGTTAGTCGGGGCGGGTTAACCAAAATT
TCCGGTTGTTTACCAGGATGTAGGTAAACCCGCCCGTACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689728.1\|6281347_6282373_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176197
NZ_AP018255.1\|WP_096689714.1\|6264451_6267238_-\|peptidase-domain-containing-ABC-transporter	unknown	unknown	gnl\|CDD\|225183
NZ_AP018255.1\|WP_096689712.1\|6263006_6263189_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689730.1\|6283867_6284455_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689727.1\|6280850_6281036_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689718.1\|6271364_6271562_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273344
NZ_AP018255.1\|WP_096689726.1\|6279713_6280784_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340832
NZ_AP018255.1\|WP_096689717.1\|6269332_6271279_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173810
NZ_AP018255.1\|WP_096689713.1\|6263560_6264178_+\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|224103
NZ_AP018255.1\|WP_096689722.1\|6276733_6277609_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_AP018255.1\|WP_096689724.1\|6278009_6278447_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350221
NZ_AP018255.1\|WP_096689725.1\|6278449_6279232_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197320
NZ_AP018255.1\|WP_096689723.1\|6277756_6278017_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689719.1\|6271768_6273226_+\|peptidase	unknown	unknown	gnl\|CDD\|238004
NZ_AP018255.1\|WP_096689729.1\|6282516_6283578_+\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|99751
NZ_AP018255.1\|WP_096689716.1\|6268211_6268982_-\|TIGR00297-family-protein	unknown	unknown	gnl\|CDD\|224749
NZ_AP018255.1\|WP_096689731.1\|6284921_6285266_-\|Dethiobiotin-synthetase	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689715.1\|6267186_6267945_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|275293
NZ_AP018255.1\|WP_096689720.1\|6273463_6274882_+\|peptidase-S8	unknown	unknown	gnl\|CDD\|173810
NZ_AP018255.1\|WP_096689721.1\|6274945_6276442_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689714.1\|6264451_6267238_-\|peptidase-domain-containing-ABC-transporter	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	0
NZ_AP018255.1\|WP_096689728.1\|6281347_6282373_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176197	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.81858e-116
NZ_AP018255.1\|WP_096689718.1\|6271364_6271562_+\|hypothetical-protein	gnl\|CDD\|273344	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds].	0.000126149
NZ_AP018255.1\|WP_096689726.1\|6279713_6280784_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340832	cd03802, GT4_AviGT4-like, UDP-Glc:tetrahydrobiopterin alpha-glucosyltransferase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.	2.52652e-152
NZ_AP018255.1\|WP_096689717.1\|6269332_6271279_+\|S8-family-serine-peptidase	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	2.10546e-28
NZ_AP018255.1\|WP_096689713.1\|6263560_6264178_+\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	2.60182e-86
NZ_AP018255.1\|WP_096689722.1\|6276733_6277609_-\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.14171e-58
NZ_AP018255.1\|WP_096689724.1\|6278009_6278447_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.80636e-32
NZ_AP018255.1\|WP_096689725.1\|6278449_6279232_-\|exodeoxyribonuclease-III	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	1.47783e-133
NZ_AP018255.1\|WP_096689719.1\|6271768_6273226_+\|peptidase	gnl\|CDD\|238004	cd00044, CysPc, Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.	1.20318e-38
NZ_AP018255.1\|WP_096689729.1\|6282516_6283578_+\|J-domain-containing-protein	gnl\|CDD\|99751	cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.	0.000456476
NZ_AP018255.1\|WP_096689716.1\|6268211_6268982_-\|TIGR00297-family-protein	gnl\|CDD\|224749	COG1836, COG1836, Predicted membrane protein [Function unknown].	7.04217e-71
NZ_AP018255.1\|WP_096689715.1\|6267186_6267945_-\|peptidylprolyl-isomerase	gnl\|CDD\|275293	TIGR04500, PpiC_rel_mature, putative peptide maturation system protein. Members of this protein family have a novel N-terminal sequence region. Close homologs to the C-terminal region of this protein score well to PpiC-type peptidyl-prolyl cis-trans isomerase models (see pfam00639), yet no sequence within the family scores well to such models, suggesting origin within a branch of the PpiC family but subsequent neofunctionalization with a rapid change of sequence. The genome context for members always includes an ATP-grasp enzyme associated with peptide modification and a short polypeptide likely to be the modification target.	8.98845e-09
NZ_AP018255.1\|WP_096689720.1\|6273463_6274882_+\|peptidase-S8	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	8.92499e-95
NZ_AP018255.1\|WP_096689721.1\|6274945_6276442_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	7.89623e-64

>NZ_AP018255.1|WP_096689721.1|6274945_6276442_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MRSPLAANAAQARQTKQVFARPEEQLSFELGKAVQELPPLYTRLLAGTISAIIFGTIAWAHFSKVDEVATAPGELIASTQVRPVTSIGNGSITSVRVKEGQRVVKDQVLVERDPEFQKLDVTRLAQSAKLIQQDLRRLDAERTGNKSAGNPIQDELLAARLRDFEAKQAAAEAEANKQAALIEQAKVRLVRLQENLVNAQTSFTNAQTNLANAKELRQKVNQNVALAKEREQSMRTLIGNGAVPRLDYLEAQDRLNRATSETTRANDEITNNQNKITEAQDKVTSLQKDMAAQVQEIRQAQAAFVSAKKQSDRLASERQSEVLTQINKRREEYTDITGKLEQARKQTEYETIKSPVTGTVYKVKATKGPVQSGEELLSILPDGEELMLEVKVLNRDIGFIRQGMKTKVKMATFPFQEFGTIEGEVAKVSPNAIVDKELGLVFPTRIKLNKHSVIVRGEEVQFTPGMTANGEIVTRQKSILTFIMEPITRRFSEAFSVR
>NZ_AP018255.1|WP_096689720.1|6273463_6274882_+|peptidase-S8
MFNNNKSNDLALHNSLSLTSSSSFNKFSNNLSNDTFSSQSYSSSNGYGLVNASSAVASAIGQQPFADVPDIGGNAWDADMVKAPEAWAKGYTGKGVVVAVLDTGVDINHVDLKDNIWTNPNDDTADGYAGDIHGWNFVDNNSDVMDRAGHGTHVSGTIAGEKNDYGVTGIAYDAKIMPVKVLDDTGSGSYDSITKGIYYAVDHGANVINLSLGGGGTNKTMEDALNYASGKGVIVVMAAGNDGGASPIYPARYAQNTGVAVGAVDKDGNLADFSNRAGSKQLTYVTAPGVSIYSTVPNNNYENYSGTSMAAPHVAGVVALMLSANRSLSDSQVRQILADTSKNSEQSDSTIPSFNFGDIFSGFNPFSSSIESTNYASRYNYTSGLSTENNITFDANSKHTASNNTSTIYTYDNSSNSNALKSFDSSNISNYSTNYSSMAATTNPQDPENIFERYGKIFLAPYEQYLRLLPKN
>NZ_AP018255.1|WP_096689719.1|6271768_6273226_+|peptidase
MSVNLFGQNESIRNLSVNQGTQIITGSVSAANREDYYSFNFSGRSSLSLAVKGMYANANLQVLNSNGQELARSVNRHNRDESINVTLEAGSYYIKVSRFRNATTTYNLEYSTGVIPQTPPPPPSPPSSSSWLDMVFQDSQIRADIKSSFSDSVIDRNEVIKILRASEDDGVVDATEFRDLQNLVSNASRLGIQEYVRVLTNKVVNGDAANQRYQNGVLGNLTAGSSSTVMSNLINKWFLGRDYPTTPYTYQQASGVLFQNGVSYQDVKQGQINDCFFLVGLAATAVESPTTIENMFIDNGDNTFTVRFFRNGVADYVTVDKYLPTDYSGRFVYASKGSSYNNPANELWVALAEKAYAQLNESGWIYQDNTNSYSGIGKSGYISDALSHITGQAVSMSNVLNLDSLMNAISTGKLIGFGSKSSGVAPDIVASHAYALVDYNASTQIFTLFNPWGMESTSKPSILQLSWSQILSNFSYWDGANKFLV
>NZ_AP018255.1|WP_096689718.1|6271364_6271562_+|hypothetical-protein
MFKVVYLFKEPQRHKGHKEREEREEREEREEREEREEREEREERETCVYTLCLDKGGFFMSIKLF
>NZ_AP018255.1|WP_096689717.1|6269332_6271279_+|S8-family-serine-peptidase
MPADVPGSSLSTALNIKVLNTAQVFTDTISSSLQSDFYKFNLEGRSHLDLSLKRFRRNLDVELVRDTNNDGVALPSEVIAFSRSKGRRTSESIKTNLESGAYYIRVYSNSKVKSFYNLSVSATPRYDATQPAPIEWKKDNIPLSTDAGTTALSPRTKPVVLQTSLSTAPVTPTPTASATPTPTTSWKVGTLSSDTFTFNGSSQITYVSGNGDINFGAGKRDVLDFKTAGISSGQVSFNWATSTGGGVVANPGNGNRLFDAITINAGAYASNQILFENIEQIQFSDATFDLATLVPGATAGFKGTIVTNDAKFNEQTSLFASGVPNAWRFSTGNSKVLIGIADSGLGVDASGNVHTDLRSTILVGNNFQDESDSYSHGTLVQSVIAAAGNNGIGIAGINWASDVEHIDVMGGNAGDQDLATATQTFINQAKLKKQKVVVNLSLSGGDSQAFINLIAQNQDNVLFVAAAGNNNTSTISNPGALAATYDNFISVGASWGNTDYYGIAKTPGTRVDYSPNNPELTATEQTAYNPWYGSNYVDTATFNAGKKPLTLMALTEYPAANAVKNPDGTFSFNYNDKFTGTSASTPVVTGVASLLWSANPNLTAGQVKDILAKTAVDLGAPGYDQYYGYGFVNADAAVRTALAMARTA
>NZ_AP018255.1|WP_096689716.1|6268211_6268982_-|TIGR00297-family-protein
MLSLINDLNPWVVAIGINTALLAVAWVAPKKLLTGAGYLNAWLLGVLIWGTLGFPGYLVVMFYFLVGSFVTKVGIVQKEAEGIAEKRSGARGPENVWGSALIATLCAVGAFALNSDFDTVHKLLVLGYVASFSTKLSDTCASEIGKAYGTRTFLITTLQRVARGTEGAVSLEGTLAGAVASLAQALIGLAVGLINGLDIGWCVLAAFIATNIESVIGATLQSRYTWLTNELVNILNTLIGAVVAILLAVLWLYSVK
>NZ_AP018255.1|WP_096689715.1|6267186_6267945_-|peptidylprolyl-isomerase
MESLSFITVDEQSISVAQAVKYLQASGKLGQFISDILRQYVIDEEISDREDVAISPALTEQAIIDFRLKNQLTDSQRFNDWLKNNGTNYETFHSSVAASFKLEKLKAVIADPKLQEYFIERKIFLDRVVLSRIIVDNRELAEELHAQIDEGASFEQIAREYSLADDKVVNGMMGPVSRGTLPDILRAAVDVASTGTLIGPLELEGRFGLFRVEQFLTASLDDTQLKQTLQNELFEKWLAEKIQKLTVRLQVG
>NZ_AP018255.1|WP_096689714.1|6264451_6267238_-|peptidase-domain-containing-ABC-transporter
MASREDSKAYSQIASGLTTNDRDLHSEVLASLPWEEAPFCWLTPDNKNVLKNSAETSRYGLGEKIWSRTSPGLHYFIVTGKVRLREEETSKPLATMEAGDWFGDLLLCAVDCKAVAASKEVIVVSWKVETWQKLSNPSVDAFWEGSTTESVSETGNGNGNGTTNLPVQRDENRPEQLESLPQAPNDRFSRQEDYSNSASQPRTQQSQFQRELLATTSIASSNYPFVASHNTGAACLTMAGIYLKNPVQLEWVQRQLRGQRPKNIVEAAEKLGFILRRVQVTWAELRQLSYPVLMRLNTTQAKEPTWVVAYGMKGDRLIVANPLNQKGECETLPQQMVVEAWDGNLWQAELVNKQEKFNLSWFLPAVMRYRGLLTEVLLASFTLQLLGLTTPLITQVVIDKVMVQESLPTLDVMAIALLSVALFEAILGMLRLFIFTHTARRLDLSLSAQLFRHLMRLPLAYFESRRVGDTVARVQELEQIRQFLTGTALTVVLDSIFAVVYLALMFYYSVPLTFAGLAVLPLFATLTLVATPILRNWLNETFNRSADSQSFLVETVTGIHSVKAHAAEPVARDRWEGLFARFIRTGFKASTTQNISSNIGDFLTNLSSLLILWFGAKLVIEQKLTIGQLVAFQMLSGRVTGPLLRLVQLWQNLQQVLLSVDRIGDILNVAPEAEPGTGLVLPPLKGEVSFEQVFFRYKEGTEPVLRGISFNVEPGQFVGIVGRSGSGKSTLSKLLQRLYTIESGRILIDGFDIKSVDLASLRQQIAVVLQEDFLFNASILENITLGNPDISAEQVVEAARLAVAHDFISQLPHGYETNAGERGTALSGGQRQRIALARLFLSQAPILILDEATSALDAETEQQVLQNLQRVSENRTVFIIAHRFAPLKRANQILVMERGVIAERGTHDGLLRDKGLYWSLYQRQQANV
>NZ_AP018255.1|WP_096689713.1|6263560_6264178_+|FMN-dependent-NADH-azoreductase
MANILHVDTSPRGERSISRGLTKEFVSTWLAAHPGDTVTYRDIGHNPIPHVDEAWIAGAFSPPDQRTPALEAALKISDELIDELVAADIYVFGAPMYNFGISSVFKAYIDQVARVGRTFTISQNGFEGLLKNKKALVITARGGSFSPGTPLAQYDFQEPYLRTVFGFIGVTDVNFIHAENLSGDGTREKSLIAAREAIETLVATR
>NZ_AP018255.1|WP_096689712.1|6263006_6263189_+|hypothetical-protein
MNEEEIINLHRKIEAGVKAAVAQAIERHRRLGESISFMKDGKIVTLTAEEIPQIQVDDKQ
>NZ_AP018255.1|WP_096689722.1|6276733_6277609_-|SDR-family-oxidoreductase
MFLVTGATGDIGRRVVRLLRESNKQVRAFVRLTSHYGELEHRGAELFIGDLRFERDIQKACQGVRYIISTHGSDGDALALDYRANISLIDQAKANGVEHFVFISVLGADRGYEDAPVFKAKREVERYLQASGLNYTILRPAGLASNLLTLAERFRETGIYLLIGDPKNRTSIVSTDDLALMAVNSVNVIGARNQILPVGGPSILTREEIPRIFSRIFNTQPIIINAPLFLVDGFRSALGIINPQAQKSLGTFRTLLANEFFCKTEEISNLEAIFTFPLEPLESFLRRYLAT
>NZ_AP018255.1|WP_096689723.1|6277756_6278017_+|hypothetical-protein
MGTEREAITIRFPFELLESAKSFKNDSESFNDLVVDAVEREVRRRKAWAAHQRIIARSEKIKNRTNTQVSSVSLIRNLREGRERRD
>NZ_AP018255.1|WP_096689724.1|6278009_6278447_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MTRVLCIDTSVWIPYLVPEQYQAQATIVIDEALSQNIRIVAPTFAWAEVGSVLRKKTRAGSITIQEAQEIFEDFCELPVDYIDTQAIRVRAWNIAVDYGLPTLYDAVFLACAESFSAEFWTADIAMIRQLVPRPSYIHELTEIEV
>NZ_AP018255.1|WP_096689725.1|6278449_6279232_-|exodeoxyribonuclease-III
MKIATWNVNSIRTRLEHVVNWLEQNPVDVLCLQETKVVDKDFPHAQFEALNYHSYIYGQKSYNGVAILSKKPLQQVSTGFTSLLPELEPIWDEQKRVITGVIDSYRILNLYVPNGSEVGCDKYEFKLRWLTVLRNYLQVLLSQNPNICMCGDFNIALENKDIHSKADIKNHIMSSDAERQALKEVLELGFADAFRKFTIEAGHYSWWDYRAMAFRRNMGWRIDHHYLTPELYERAISCVIDQAPRKLEKPSDHAPVIVEF
>NZ_AP018255.1|WP_096689726.1|6279713_6280784_+|glycosyltransferase-family-4-protein
MKIAQVAPLWERVPPPTYGGIELVVSRLTDELVRRGHDVTLFASGDSYTEAKLEAICPRALRLDPNFREYSAYETLELSQVYQCAGEFDIIHSHVGVPALLSAHFVPTPTVHTLHGSFNSENIKVFTHHKKQPFVSISNTQRTLDLNYVRTVYNGINPDDYPFVAQPLETKPYLAFLGRFSPEKGPQHAIAIARATGWHLKMAGKVDVADTEFFEREIAPHIDGEQIEFLGEVGNSEKVELLGNAKVALFPITWQEPFGLVMIESMATGTPVIATNMGAVPEVIVHGVTGMVCNSYEEIAAMLPQALQLNRHDCRKHVENNFSVARMVDGYEKVYEKIIQDRINQNGRIHAAQIAF
>NZ_AP018255.1|WP_096689727.1|6280850_6281036_+|hypothetical-protein
MTMRSSSCPCCGSSMLLRHIRHGKVYWLCQSCRQEVSLLTVNRTSTGETRNLGVVSQPASP
>NZ_AP018255.1|WP_096689728.1|6281347_6282373_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MLAALLYGQEDLRLEQVSDPLPDAGEVVIKVHAATTCGTDLKVWRNGGHAKMLKPPTLFGHEAAGEIVAVGAGVTKWKVGDAVVANNSAPCGHCFFCLRREYSLCPNLTWNNGTFAQYLKIPAKIVQHNLLLIPDIAYELAAMTEPLACVLHGIARSNVKPGDRVVLLGDGAIGLMFVAKLVLDGSQVLVFGGNDKRLEIATKLGAAQTFNYHQVQDIPSLVKELTDGYGADIVIEATGDKSVWETAIACARPGATVNLFGGCPKNTNISVSTEQLHYSELTIKGVFHNTPYFVREALSLIASRKIMFEWLISERRPLKDLEQVFVDMRERKVIKVAIQPD
>NZ_AP018255.1|WP_096689729.1|6282516_6283578_+|J-domain-containing-protein
MSRKSSPTIKRAPSTTTTATLAPSEVHLRLEGLEVEHQKLLKQIKKKRAELDKFIEQMRTVASEVFSRATPNFQKIALLNQEIHTIFNEIFKNKKLNKQNRKKVEEIYRTLQYAEIISPQPIQEEIEIDEQFNGDEDFNKSNQSHHQHYYYQSDSDAESPSAGRSESSKKIRHIFLRLAEIFHPDKASDSETQERHTEIMKEINRAYTEGDLARLLEIEQQYQVGEQIDSSSEDDLSRKCLRIEQQNGVLKTQFESLKRSLREAKKTPQGGMVTDFRKFRKQGVEPLDTITEQLEHQINIISQIRDYAQDFNQSRISVKDFLRGPEILRSLEREMMEELLEDMFDDFDGYVRY
>NZ_AP018255.1|WP_096689730.1|6283867_6284455_+|hypothetical-protein
MLNKRLICWLLPFTFLAFTDNALALPGQSTEEVGAWLKGHATLKPNRGERFFIQRSDTAAQRFTFQASVLPPGAVGFLRDRSKIRTERLAMYDAINGMSFERLQESLRVIYGLDIYQDFKRAQVIYEYPNESAINSARLARTPIREALRGQLRMGDRFAYWIEIAKPKDGKAFTGQMTVLLKSDIDKLEAELRNR
>NZ_AP018255.1|WP_096689731.1|6284921_6285266_-|Dethiobiotin-synthetase
MNYDTARKVLIDQAITNDYHPDALLTRMQQGKPPVPGQITSVLLALKVAFEGLKEVTTLDRELAYALYLLSIRTQQLFTLGRKNGIDWPPLFKEDLLRISAACESIFSGTWQNS

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Crispr_ID: NZ_AP018255_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_24

6291122-6291211

Orphan

A:N

Consensus_repeat	Method
GGATTTTCCTAGAGGATATATTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_24

>merge|NZ_AP018255|24|6291122-6291211|CRISPRCasFinder
GGATTTTCCTAGAGGATATATTTGGAAATGACTTATCCTCTAGGAATTTGGGCGCCATTTGCGTATGGATTTTCCTAGAGGATATATTTG

>NZ_AP018255|24|23|6291122-6291211|CRISPRCasFinder
GGATTTTCCTAGAGGATATATTTG	GAAATGACTTATCCTCTAGGAATTTGGGCGCCATTTGCGTAT
GGATTTTCCTAGAGGATATATTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096689742.1\|6294916_6295279_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
NZ_AP018255.1\|WP_096689729.1\|6282516_6283578_+\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|99751
NZ_AP018255.1\|WP_096689743.1\|6295779_6297063_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|182070
NZ_AP018255.1\|WP_096689745.1\|6299266_6300442_-\|patatin	unknown	unknown	gnl\|CDD\|226148
NZ_AP018255.1\|WP_096689730.1\|6283867_6284455_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689744.1\|6297083_6298991_-\|DUF3352-domain-containing-protein	unknown	unknown	gnl\|CDD\|371750
NZ_AP018255.1\|WP_096689737.1\|6289999_6290833_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl\|CDD\|180958
NZ_AP018255.1\|WP_096689728.1\|6281347_6282373_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176197
NZ_AP018255.1\|WP_096689747.1\|6301108_6302308_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689736.1\|6289547_6289844_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372767
NZ_AP018255.1\|WP_096689733.1\|6286342_6287017_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_AP018255.1\|WP_096689739.1\|6291756_6291945_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689735.1\|6288632_6289181_+\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|227799
NZ_AP018255.1\|WP_096689738.1\|6291275_6291767_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689732.1\|6285367_6286159_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_AP018255.1\|WP_096689746.1\|6300558_6300936_-\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|378672
NZ_AP018255.1\|WP_096689741.1\|6293102_6294806_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl\|CDD\|236020
NZ_AP018255.1\|WP_096689731.1\|6284921_6285266_-\|Dethiobiotin-synthetase	unknown	unknown	unknown
NZ_AP018255.1\|WP_096689734.1\|6287227_6288496_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275319
NZ_AP018255.1\|WP_096689740.1\|6292223_6292940_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096689742.1\|6294916_6295279_+\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	6.31067e-41
NZ_AP018255.1\|WP_096689729.1\|6282516_6283578_+\|J-domain-containing-protein	gnl\|CDD\|99751	cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.	0.000456476
NZ_AP018255.1\|WP_096689728.1\|6281347_6282373_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176197	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.81858e-116
NZ_AP018255.1\|WP_096689744.1\|6297083_6298991_-\|DUF3352-domain-containing-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	7.71443e-68
NZ_AP018255.1\|WP_096689737.1\|6289999_6290833_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl\|CDD\|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NZ_AP018255.1\|WP_096689743.1\|6295779_6297063_+\|diguanylate-cyclase	gnl\|CDD\|182070	PRK09776, PRK09776, putative diguanylate cyclase; Provisional.	2.41075e-64
NZ_AP018255.1\|WP_096689736.1\|6289547_6289844_+\|hypothetical-protein	gnl\|CDD\|372767	pfam13867, SAP30_Sin3_bdg, Sin3 binding region of histone deacetylase complex subunit SAP30. This C-terminal domain of the SAP30 proteins appears to be the binding region for Sin3.	0.00301173
NZ_AP018255.1\|WP_096689733.1\|6286342_6287017_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	5.79429e-37
NZ_AP018255.1\|WP_096689745.1\|6299266_6300442_-\|patatin	gnl\|CDD\|226148	COG3621, COG3621, Patatin [General function prediction only].	1.08258e-35
NZ_AP018255.1\|WP_096689735.1\|6288632_6289181_+\|DUF721-domain-containing-protein	gnl\|CDD\|227799	COG5512, COG5512, Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives [General function prediction only].	6.39629e-24
NZ_AP018255.1\|WP_096689732.1\|6285367_6286159_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	1.50925e-54
NZ_AP018255.1\|WP_096689746.1\|6300558_6300936_-\|calcium-binding-protein	gnl\|CDD\|378672	pfam11535, Calci_bind_CcbP, Calcium binding. CcbP is a Ca(2+) binding protein which, in Anabaena, is thought to bind Ca(2+) by protein surface charge. When bound to Ca(2+), the protein becomes more compact and the level of free calcium decreases. The free Ca(2+) concentration which is regulated by CcbP is critical for the differentiation process. Calcium signalling is widespread in bacterial species, and prokaryotic cells like eukaryotes are equipped with all the elements to maintain Ca2+ homeostasis.	1.14591e-39
NZ_AP018255.1\|WP_096689741.1\|6293102_6294806_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl\|CDD\|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NZ_AP018255.1\|WP_096689734.1\|6287227_6288496_-\|hypothetical-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0.00111472
NZ_AP018255.1\|WP_096689740.1\|6292223_6292940_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.61286e-19

>NZ_AP018255.1|WP_096689737.1|6289999_6290833_-|1,4-dihydroxy-2-naphthoyl-CoA-synthase
METTWQTVKTYEDILYHKADGIAKITINRPHKRNAFRPKTVFELYEAFCDAREDTTIGVVLFTGYGPHTDGKYAFCSGGDQSVRGQAGYIDDEGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLICDLTIAADNAVFGQTGPKVGSFDGGFGASYLARIVGQKKAREIWFLCRQYNAQQALEMGLINTVVPVEQLEAEGEIWAKEILEKSPIAIRCLKAAFNADCDGQAGLQELAGNATLLYYMTEEGAEGKQAFLEKRQPNFRSFPWLP
>NZ_AP018255.1|WP_096689736.1|6289547_6289844_+|hypothetical-protein
MKSIKFLTSACRYCRHYNPEGRRGGNCQQLSAPVQGHWKACSLALPAFAPSWETLEDAWSLPEAIPVVATNLNTDAITQLKEVGVHGVEFSVGEVISV
>NZ_AP018255.1|WP_096689735.1|6288632_6289181_+|DUF721-domain-containing-protein
MAFRTVSDVLGILQARGHWQTPPLQILLKCWHEIVGSTIALHTRPVSIHRDVLRVATSSAAWAQTLTFSRKTLLIEVNQKLSHQLTDIHFSTAGWNTTTPIIKLKRPLHQEHPCYQERMIEPVNENVPVNNSNAVNKTFDSWVKKVQASSQNLPLCPTCQSPTPNGELQRWGVCALCAAKKF
>NZ_AP018255.1|WP_096689734.1|6287227_6288496_-|hypothetical-protein
MSQNTVTHLGSQLSKTPSLKPPLAAALAGMEVQLDRELARYRRTRTGGYRASNQSSSYTPNSSSVGLQYLTPVTATPPENVADSINLDENTTEIPIPENVTPSTSTNEIPLPPPPPPPPPPPLFPDVTITPPVKETAISPQNSGSIVPVTTIKASKDENIEPRITDSTSQNQPEDYLESSEALLRSLTEEAPKAEKRPKSNSDTLLSPLGIGSILLLLMASVILGYVVINPKSLPQFSLNGLFKRNNSTATNTDIDSQSSNGNTQTVAQPQLTPIPRYPNLAKDEFPEVKTPNDVVGLTPKPKPTLAPTPTVPLENSSPSPSSVIAPPSPIEATQTPVAITPSPTPTQDIPLNDLKPSSDGFYHVVIDNNGGNAFDNARKVVPDAYLSPDGKLIYLGAIKNKQKVQELLTEIRGKGLDARVK
>NZ_AP018255.1|WP_096689733.1|6286342_6287017_-|PspA/IM30-family-protein
MGFLDRITRVVRSNVNSWVTSSEDPEKVLEQAVLEMQENLIQLRQAVASAIATQKRTERQVANAQSAAEEWYRRSKIALGQGNETLAREALTKRKSYQETSILLNAQIEQQNSVVATLKKEMRSVELKIAEIKNKKDMYIARARSASASLRLQELMGVLESGSTSVFDRVEDKIIQLEAQKEVICITNEDNLEKKFLALESSDNDIDTQIRAMKAQISNTLTEK
>NZ_AP018255.1|WP_096689732.1|6285367_6286159_-|PspA/IM30-family-protein
MGLFDRIRRVVSANLNDMVSKAEDPEKMLEQAILEMQEDLVQLRQGVAQAIAAQKRTEKQYNDAQNEINKWQRNAQLALQKGDENLARQALERKKTFTDSGTALKASLDQQTTQVETLKRNLIQLESKISEAKTKKEMLKARITAAKAQEQLQGMVRGMNTSSAMSAFERMEEKVLMQEARAQSAAELAGADLETQFAKLEAGSDVDDELEALKAQMTLGPATAPNQPQLPGQTTAQPQASTPKSEEVVDAELESLRKQLDNM
>NZ_AP018255.1|WP_096689731.1|6284921_6285266_-|Dethiobiotin-synthetase
MNYDTARKVLIDQAITNDYHPDALLTRMQQGKPPVPGQITSVLLALKVAFEGLKEVTTLDRELAYALYLLSIRTQQLFTLGRKNGIDWPPLFKEDLLRISAACESIFSGTWQNS
>NZ_AP018255.1|WP_096689730.1|6283867_6284455_+|hypothetical-protein
MLNKRLICWLLPFTFLAFTDNALALPGQSTEEVGAWLKGHATLKPNRGERFFIQRSDTAAQRFTFQASVLPPGAVGFLRDRSKIRTERLAMYDAINGMSFERLQESLRVIYGLDIYQDFKRAQVIYEYPNESAINSARLARTPIREALRGQLRMGDRFAYWIEIAKPKDGKAFTGQMTVLLKSDIDKLEAELRNR
>NZ_AP018255.1|WP_096689729.1|6282516_6283578_+|J-domain-containing-protein
MSRKSSPTIKRAPSTTTTATLAPSEVHLRLEGLEVEHQKLLKQIKKKRAELDKFIEQMRTVASEVFSRATPNFQKIALLNQEIHTIFNEIFKNKKLNKQNRKKVEEIYRTLQYAEIISPQPIQEEIEIDEQFNGDEDFNKSNQSHHQHYYYQSDSDAESPSAGRSESSKKIRHIFLRLAEIFHPDKASDSETQERHTEIMKEINRAYTEGDLARLLEIEQQYQVGEQIDSSSEDDLSRKCLRIEQQNGVLKTQFESLKRSLREAKKTPQGGMVTDFRKFRKQGVEPLDTITEQLEHQINIISQIRDYAQDFNQSRISVKDFLRGPEILRSLEREMMEELLEDMFDDFDGYVRY
>NZ_AP018255.1|WP_096689728.1|6281347_6282373_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MLAALLYGQEDLRLEQVSDPLPDAGEVVIKVHAATTCGTDLKVWRNGGHAKMLKPPTLFGHEAAGEIVAVGAGVTKWKVGDAVVANNSAPCGHCFFCLRREYSLCPNLTWNNGTFAQYLKIPAKIVQHNLLLIPDIAYELAAMTEPLACVLHGIARSNVKPGDRVVLLGDGAIGLMFVAKLVLDGSQVLVFGGNDKRLEIATKLGAAQTFNYHQVQDIPSLVKELTDGYGADIVIEATGDKSVWETAIACARPGATVNLFGGCPKNTNISVSTEQLHYSELTIKGVFHNTPYFVREALSLIASRKIMFEWLISERRPLKDLEQVFVDMRERKVIKVAIQPD
>NZ_AP018255.1|WP_096689738.1|6291275_6291767_-|hypothetical-protein
MTTDTYEIYDHLADRETLIVYMTKHEGESVSIDGSLLTVGRCTRILQDSYDFRPVHKRQVKIGERLTVSATIGGKVKARTIPTDWVVTETETYEPKNDIPGFREIVIAYCEQVPLSLDEFRKAIYETGVVVSLDSFGGDEEAYQKYLKSSKATANSNGNVNAI
>NZ_AP018255.1|WP_096689739.1|6291756_6291945_-|hypothetical-protein
MTEEAQQKENRHAVTSPEYCKKMASKYGWKLKRIEKKGIGQLPYECVFEGEQTSFEDTTNDN
>NZ_AP018255.1|WP_096689740.1|6292223_6292940_+|class-I-SAM-dependent-methyltransferase
MSQIYPGEVFANTSDFDAGIRQLLPRYDEMLEVITRCVPSTSKKILELGCGTGELTLKMLKRCPDAEIIAVDYSPRMINFAREKVELAGYQQRWSGKEVDFGEWAIHPDKFRIGANFDACISSLAIHHLTDEMKQNLFIRIHETLSTDGCFWNADPTLPEAPVLAEVYKLAREEWATQQGTTLGDVRARVGTSSTYGYSSQDQLATLEAHLQMLMQAGFSTVAVPWKYYGLTVFGGLR
>NZ_AP018255.1|WP_096689741.1|6293102_6294806_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MSFNFSNTNELWSFVLVETLKRLGLTCAVICPGSRSTPLAVAFALAPDIEVIPILDERSAAFFALGRAKATHKPVAVVCTSGTAGANFYPAVIEAKESCVPLLLLTADRPQELRFCHSGQTIDQVKLYGDYPNWQAELVVPSASISLLTYLRQTVIHAYERCIFPQGSAVHLNIPFRDPLAPIPDGVDLTDLQSKVTNEDFWCHIQPISLPSYSSGLPPISRRGIIIAGVAQPTQSEQYCNSIANLARALNFPVLAEGLSPVRNHAHLNPYIISTYDAILRHPHHRVLLAPEVVILIGEMPTSKELRTWLQYQPRLIIIDKTSRNLDSLHLNTTHLRLDISELTSIPSFPPNAYLEQWRHLEAKTRAVLDRTLEQESEFEGKAAWLLSQILPPKTPLFIANSMPVRDVEFFWKPNNLGIEIFVNRGANGIDGTLSTALGIAHRNQSSVMLTGDLALLHDTNGFLIRNKLIGHLTIILINNNGGGIFEMLPISQFEPPFEELFATPQDIDFAKLCATYNIEHELITSWNLLKEKLNPLPTKGIRVLELRTNRKADAKWRKHNLSQFAN
>NZ_AP018255.1|WP_096689742.1|6294916_6295279_+|dihydroneopterin-aldolase
MDNIHVTGIRAYGYTGYLKEEQVLGQWFEVDVKLWLDISKAGKTDAIEDTLDYRTVISLVKHIIQTSQFALIEKLITTIADSILAECNSVTQVQVILSKPAAPIPDFGGKISLEVTRSKV
>NZ_AP018255.1|WP_096689743.1|6295779_6297063_+|diguanylate-cyclase
MDCPKILVVEDSRVLAIDIRNSLHNAGYAVLDVTDSVVEAIQKVTETQPNLVLIDTCLAGDVDVIEAGDVIRKNFHIPVLYLMEHTVQPNLYQNRLDEPFSYIFKPFTQKDLHNAVEMALYKHHIETKFETELSRILTAINSMGSAVVITDISGQVQVMNRIAEALTGWKEEEVIGKHITHVLNLVDNDTGEELDYLVRQALTQGKVLNLPDNCMLINKNGDSIPVGDNVAPIRDSDGNITGAVLVFQDISQRKQMEARLVRNAFYDALTSLPNRVLFLDRLRQAFERAKRRNNYQFAVMFLDLDGFKAINDRYGHSMGDNLLVEAARRLNSCLRSGDTVARFGGDEFAVLLEDVKDVSLATNVAKRIQESLKQPLSLNGHEITTTASIGIALSSKKHEEPGHLLHDADIAMYRAKQQGKAKFAVSS
>NZ_AP018255.1|WP_096689744.1|6297083_6298991_-|DUF3352-domain-containing-protein
MKKFIKIGMAGAVCALLYVPTVNAKVVNNTSTPVKQVKSTHLRTFKNTIAFLEKKLVAARPEQEQPIETTPRVAEITDFFPKDTPLLVSFNTSSETWGSLNRFHLFHMVQQGISQLIPKDANINFDYVRDVQSWLGEEVGVGFLPKVTNQTATIESSLVVVAPIRDMRRLQSLIDIIEQDKSKVKVKKYKDATIYEIDISPAKTEPVTAFKTKSIPTKLPSPEISEPNTLVIASLNGYVALSFSAKPIERLVDTKSANVGIIGQKPEFKDFTRRQGTQALYSMYQNPYEYMVLFNDLIKDVFKSDEFKDFKGILDSKAFKPEQYKQYKSIYSSLAPQPEGLRFQVQTFLNPNKSKSAKIEDKITSRMPGATYSALTGSNISLQWQTLATILSASIPEFNNGLKGFRELVKLATGLDFDKEIIGWMDGEYGFFMYPTKGGFFNTISPNFNLGIGLVVKTTNRNLAEKTLTKLGDLIKTSTNGEVVAKNIDIKGQAVTTWTPGKDSSKSLFALSWVDKDTLIVTSGSGAMADLVPRPKAPLASTYNFSNATSSLPYPNQGYFYVNTGSFLSWIYGFVPQEYQSNEYFKVFKQAAGSVRSLSATTSKINQPEQLGEQFDFLVTLAPTLKQTSSSITSH
>NZ_AP018255.1|WP_096689745.1|6299266_6300442_-|patatin
MPFNILSLDGGGIRGIVAAKMLSIIEKEIKAPLNEYFQLITGTSTGSILAAAIASGRSSEEIVDLYKQQSSIIFPYRKRFTLKRLPLIFKHGISAPKYSEAGLIQVLQGVFGNTALFDITSPLLLIISFDTVEREPIFFKSWRQDKAYGNVPLWEVCVCSASAPTYFPAHKLNRRINGTTQDGFSDAIILDNAAASVDNIYNNMQISIINGTGSSQTRTIKKYIGSTRRGVVYPAWDKIPDKTSIYSIKSLYSAIDGGVAANNPSSCAVAEALRLGYPIEDIRVLSIGTGERTRVIPFEKAQHWGLIQWAQPLIGILFDGSSEIYEYITKQIAHRRILRLQFKLDRELTGKRLSDDIDDVSPENIANLLEAAQVYMQQPDIQKSLHKFINS
>NZ_AP018255.1|WP_096689746.1|6300558_6300936_-|calcium-binding-protein
MSDVETDEAREERIKNEILVDAEDKEDRAMGWYYYLDDCLNFPFNAKWAKKGRKGTAPEKDVEVLAMATEEECLRDMLVEVVEVGGKDEDVDIARLTDLKVLDADSDTQEALDDWYYWVAKGYKF
>NZ_AP018255.1|WP_096689747.1|6301108_6302308_-|hypothetical-protein
MPQQPREFDAVLSNSLPPKVGAVLGGIEGVKNRFNSPIAEVRIAALNNALNYGEPGIDLIIQRLQDVEAVQLYAIRLLLHFGGAKGKQALLNYHPKLFFTTLQHWDIQNYNPQLSITHTAYNIILNRMTANKPDKFDLSQLQSFLQATQTTQIEALACKMWDDYWQHDTQYRDFENVLCGACDKLPNLKALFIGDGDAQEANYMKSRLLLSDSTSILTKYPNLEVLQFRGGWGLQFDKVRHEHLKTLMIQTGYTIVQPQTINDISNLDLPALEYLEIWLAESFHYGQDISTQRLAPILSGELFPSLKYLGLKSSNYSDNIAFSIVNSPLLQRLAVLDLSQGTLTDFGAETLLKCPAINQLHTLNVSMNKLSARMVQKLSRLHCRVMTQPQDNGERQPAP

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Crispr_ID: NZ_AP018255_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_25

6651273-6651348

Orphan

A:N

Consensus_repeat	Method
ACTCAGCACGAGCGCACGAGCGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_25

>merge|NZ_AP018255|25|6651273-6651348|CRISPRCasFinder
ACTCAGCACGAGCGCACGAGCGCACTCAACACTCATCACTCACCACTCTCCACTCAGCACGAGCGCACGAGCGCAC

>NZ_AP018255|25|24|6651273-6651348|CRISPRCasFinder
ACTCAGCACGAGCGCACGAGCGCAC	TCAACACTCATCACTCACCACTCTCC
ACTCAGCACGAGCGCACGAGCGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_019491762.1\|6665479_6666004_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_AP018255.1\|WP_096694312.1\|6643923_6644433_-\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_AP018255.1\|WP_096690026.1\|6653041_6655306_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226654
NZ_AP018255.1\|WP_096690032.1\|6662788_6663367_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096690017.1\|6638710_6640144_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_AP018255.1\|WP_096690025.1\|6651429_6652689_+\|FAD-dependent-hydroxylase	unknown	unknown	gnl\|CDD\|236001
NZ_AP018255.1\|WP_096690023.1\|6649059_6649665_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223560
NZ_AP018255.1\|WP_096690019.1\|6642486_6643530_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_AP018255.1\|WP_096690021.1\|6645171_6646272_-\|tocopherol-cyclase	unknown	unknown	gnl\|CDD\|372979
NZ_AP018255.1\|WP_096690027.1\|6655306_6656083_-\|slipin-family-protein	unknown	unknown	gnl\|CDD\|259808
NZ_AP018255.1\|WP_096690034.1\|6666844_6669178_+\|CHASE2-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_AP018255.1\|WP_096690020.1\|6643623_6643911_+\|DUF2288-family-protein	unknown	unknown	gnl\|CDD\|227913
NZ_AP018255.1\|WP_096690030.1\|6658920_6661644_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_AP018255.1\|WP_096690031.1\|6661764_6662589_-\|DUF4343-domain-containing-protein	unknown	unknown	gnl\|CDD\|375726
NZ_AP018255.1\|WP_096690028.1\|6656330_6658628_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604
NZ_AP018255.1\|WP_096690024.1\|6650286_6651054_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690022.1\|6646416_6649020_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096690018.1\|6641290_6641926_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_AP018255.1\|WP_096690033.1\|6663777_6665382_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|234864
NZ_AP018255.1\|WP_096694311.1\|6640363_6641248_+\|phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270371

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_019491762.1\|6665479_6666004_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	4.21516e-60
NZ_AP018255.1\|WP_096694312.1\|6643923_6644433_-\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	1.64411e-24
NZ_AP018255.1\|WP_096690026.1\|6653041_6655306_+\|HAMP-domain-containing-protein	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	1.82916e-47
NZ_AP018255.1\|WP_096690032.1\|6662788_6663367_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	3.40391e-46
NZ_AP018255.1\|WP_096690017.1\|6638710_6640144_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.33706e-67
NZ_AP018255.1\|WP_096690025.1\|6651429_6652689_+\|FAD-dependent-hydroxylase	gnl\|CDD\|236001	PRK07364, PRK07364, FAD-dependent hydroxylase.	0
NZ_AP018255.1\|WP_096690023.1\|6649059_6649665_+\|DnaJ-domain-containing-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	1.18215e-13
NZ_AP018255.1\|WP_096690019.1\|6642486_6643530_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.31608e-43
NZ_AP018255.1\|WP_096690021.1\|6645171_6646272_-\|tocopherol-cyclase	gnl\|CDD\|372979	pfam14249, Tocopherol_cycl, Tocopherol cyclase. This family contains tocopherol cyclases. These enzymes are involved in the synthesis of tocopherols and tocotrienols (vitamin E).	0
NZ_AP018255.1\|WP_096690027.1\|6655306_6656083_-\|slipin-family-protein	gnl\|CDD\|259808	cd08826, SPFH_eoslipins_u1, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes a subgroup of the stomatin-like protein family (SLPs or slipins) that is found in bacteria and archaebacteria. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Bacterial and archaebacterial SLPs remain uncharacterized. This subgroup contains PH1511 from the hyperthermophilic archaeon Pyrococcus horikoshi.	1.46128e-91
NZ_AP018255.1\|WP_096690034.1\|6666844_6669178_+\|CHASE2-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.89753e-58
NZ_AP018255.1\|WP_096690020.1\|6643623_6643911_+\|DUF2288-family-protein	gnl\|CDD\|227913	COG5626, COG5626, Uncharacterized small conserved protein [Function unknown].	2.00941e-37
NZ_AP018255.1\|WP_096690030.1\|6658920_6661644_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.74565e-63
NZ_AP018255.1\|WP_096690031.1\|6661764_6662589_-\|DUF4343-domain-containing-protein	gnl\|CDD\|375726	pfam18299, R2K_2, ATP-grasp domain, R2K clade family 2. Family of ATP-grasp enzymes belonging to the R2K clade, wherein one of the absolutely-conserved lysine residues has migrated to the RAGYNA domain which is a part of the core ATP-grasp module. This family is predicted to catalyze peptide ligation reactions on protein substrates in biological conflict contexts, probably between bacteriophages and their hosts.	2.43309e-10
NZ_AP018255.1\|WP_096690028.1\|6656330_6658628_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	5.87563e-66
NZ_AP018255.1\|WP_096690022.1\|6646416_6649020_+\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.61986e-111
NZ_AP018255.1\|WP_096690018.1\|6641290_6641926_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.13897e-51
NZ_AP018255.1\|WP_096690033.1\|6663777_6665382_-\|2-isopropylmalate-synthase	gnl\|CDD\|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NZ_AP018255.1\|WP_096694311.1\|6640363_6641248_+\|phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.31528e-71

>NZ_AP018255.1|WP_096690024.1|6650286_6651054_-|PEP-CTERM-sorting-domain-containing-protein
MARLQISHRLFPVFIRVLFAALALQAGRVSATQGIFDATKVNQDLTNALSSTQSQVLFDNGAPSLTAGREATLWIQAEDFVVSQDSWLDHLKFWTVEAPGSKWDGTAKYFLFQDIGGQPDTQAFASGIGTNVLKQATNRSLFNYYNEYSYSFDFEKPVNIAANTIYWLGLQLSSNFERDDIYWETTDKGFGTNGMSVYQGDTKNWSRSSDPVERAFVLSSKSNTGSRKIPEPSVVLGSLLVVGAVLRSKKCARAE
>NZ_AP018255.1|WP_096690023.1|6649059_6649665_+|DnaJ-domain-containing-protein
MNNRIDINRAYEIFGLVPGASQQEIKRAYRQLIRIWHPDSIADPVKKLEAEERTKIINAAYKILKSQDNIPQPQTPRDKVNVTNSKPTASNAEKFYDCGVENVKRGKYEEAIKNFTQAIRLNPLYIEAYKYRGLVCSQLGLELRATADLTKAIELERRLHGKYSKPPAPPPNYKYSYYRKPKPFGERVCQALKNLFRLKRR
>NZ_AP018255.1|WP_096690022.1|6646416_6649020_+|hypothetical-protein
MTKRNTIDFLEYLLLGLCIWGAFAAFISQEYSYAIFPLTLAIALNVANQQRLRSLQRRQESSIGELVQPNPQLSLTQQQVEQLRNQEKQDIEAINSRLKQIESFRIEISKTQQNQQNTVNAINQRLAQIDNIARQLNATQKLLEELRSSQQQNIDSINQRLTQLDALTKQANPNALNQRLTQIDNIAQQLNATQQYLEQLRQNQVQNVNIINQRLTQIDSFTQQLNSTKQQVEQLQNQQINVQEINQRLAQIDNVTQQVVSTQKQLEEMQKSQQQNVQAINQRLAQIDAMTRQINTNSNKQAEQYQTNQQLNITALVSGFNQQLSTTQQQLEELQNNQQKNIDIINQKLSALDIFTTELSSTLAKQIEQLQTNQQVNANAINQRLAQIDNIAQNFNIIRTSIQELQQNQQQANQKTQEDISQLKSQIARLSGRLELETTTPPSVNKPSTLKQSTSPQPTTTNQLSTPNQSTSPQPTATNQPSTSNQSTITNQPSTSPQPTITNQPSTSNQLTSPQPTTTNQPSTSPQPTTTNQPSTSNQSTSSQSITTYQLPTTLKQHSDLILSLAFNPDGTLLASGSCDETINIWNLVNQKYHTISGHKQASSKSAVNSVVFSPNGQILASGSDDATVRLWNVQTGEAINTFNGHDDRVYCVAFSPDGRIIASGSKDQTVKLWSTETGRELDALKAHSDDVLCLTFSPNGKILASGAGGYDNTIKIWHLEQHKFLTIARHTDDVSALASSPDGKTLASGSWDKTIRLWNFENGREINTFTGHEDRVYTVAFSPNGRVLASGSRDKTVRLWQVDTGVLLKTYTGHEDRIFSVAFSPDGKILATGSADRTIMLLPVGDIVGNGAGRRTQLPMRGKGND
>NZ_AP018255.1|WP_096690021.1|6645171_6646272_-|tocopherol-cyclase
MLSTRRNSLLSIQTPHSGYHWDGSSRRFFEGWYYRVTIPEVKQTFAFMYSIEDPVGGKPHSGGAAQILGPNDEYLWRTFPDVNKFWASRDVLALGHWGKSNLSTQPLYLLPSEFEHHVQSGYQATATLNQGIIKDPATGSYCRWQYEIEPIYGWGSTGQPQQSTAGLLSSLQIFEPGWQILMAHGLATGWIDWNGTRYEFSNAPAYGEKNWGGAFPKRWFWVNCNSFDLEPDLALTAGGGRRGVLWWMESVAMVGIHYKGKFYEFVPWNSKVTWDISPWGRWEIRARNNQYEVELIGTTDLPGTRLRAPTDNGLVFCCSDTMQGMLSLELRELSSGEAKTILKATSNLCGLEIGGSPWDKSWQSPP
>NZ_AP018255.1|WP_096694312.1|6643923_6644433_-|YdcF-family-protein
MLLLGYREVQNYFIQPQAILVLGGSTTKLEREKFTAKFAKKHPSIPIWISGGSPKAPTKQVFSKQGVDLKRLHLDYDAVDTVTNFTTLVDELEARKIKKVYLVTSDYHMRRASIVGEIVLGSRGIDFKAVSIPSDVPPEPIQKCVRDGVRSILWLTTGYTGAKGEQPKQ
>NZ_AP018255.1|WP_096690020.1|6643623_6643911_+|DUF2288-family-protein
MSDIRTELTENLDEAEWDWLVPHAQRDAIILVSSLLDLLDVGVAIASDSTNQVQVWIDEALITKPSPQQLGTWNTNRAKRFDTLIVQPYVLVKEK
>NZ_AP018255.1|WP_096690019.1|6642486_6643530_+|AI-2E-family-transporter
MTGLEAKNLWSRLSSSALVRFLLFVASGWAMVQLLAYFESIIVIFAFAAIIAFLLSYPVKWLTRYIPHSVATIVVFLVSMTVIGGVTVTVGLTVLSQGQELINSVTSFLDSLVPLSNRLEEFFRSRNLQIDLSVFEGQLRNQALSWLATSLTIFQGFITNFVTFILIAVVAFFMLLDGGKLWQLMMKPIPKQRRNHITKIVRKNFLGFFRGQLILTLFLTLTTFIVFTVLEVPFALILSVMVGVIDIIPGIGATLAVSLVTLIVLSQSVWLALKVLIACIILQQIQDNLISPRVMQGALNLNPVVVFFALLVGARVAGLLGIFISIPIAGVIVSLFEIDEMKAEVES
>NZ_AP018255.1|WP_096690018.1|6641290_6641926_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MSRIREPIASLLLYHAFKWSVVAPMLHVYFRGRIHGIENVPQEGPLVVVSNHASNYDPPLVSNCVRRPVAYMAKKELFDIPVFNKAIQLYGAYPVSRGSADTKAIRAALEYLENGWAVGVFLQGTRTDSGKITDPKRGAALLAAKGKAPLLPVCLWGTQEIEKKGAVPRPVPVTVRIGQLIEAPTSGSKEELEEITKKCADAINALHDLGR
>NZ_AP018255.1|WP_096694311.1|6640363_6641248_+|phosphate-ABC-transporter-substrate-binding-protein
MSVLDSDIKYLEGILNEKPNTKNLNIIPLLLIPLALILGGFGYWYFTQQAPTTATCLASGTKVRINGSTSMVRINKMLKKLIESNCPGSVIETGSSGSDVGIQQLSAGQVDIAAVSRPLNAQEQAKGLVANFVKRDAIAIVVGKQNPFTKGLTTAQVADIFQGKINNWSAVGGTAGTIRVINRPLVSGTRHAFHELVLNNAEFGATPNITTYPTDETTPILKKLQADGISYGSYAQVNQQTVRVVPIDGLMPDSQQYPLRRQLSYIYKEPMSPAVKTFMDFLKSPEAQEIIKQN
>NZ_AP018255.1|WP_096690017.1|6638710_6640144_+|protein-kinase
MTLCINPHCQQPNNPDTGKVCQCGSKLLLLDRYRPISILGKGGFGKTFLAIDEHKPSKPRCAVKQLSFVGYEQLVKKAVDLFEQEAVVLESLGNHPQIPTLLAYFTHEERLYIVQEFVEGVTLEQELLQGAYSEFRIRQLLHSILPVLKFVHEQNILHRDIKPPNIIIRASDGKPVLIDFGVAKVLQSSSFISQATALGTLHYAAPEQFRGSVFQSSDLYSLGVTCISLITGVFSVEKMYDGANLGWCWRKFLPATNIISNGLGEILDKLIEFQPIQRYQSAQEVLQALSLLPSVNTNLPPTQINYQIPVTQPSSASIPVTIKSSASQTSKIEIYYIKLELLLQSQKWKEADLETWKLLCMALNKPPETKITSNEINLIHCEQLHKIDQLWIEASNGKFGFSVQNRIFESVGKDYVLFCQHVQWQSYNSTLFHQSLKFTSKAPPGHFPSRIWAENDKYWRYLNIIASKLSQCSVTII
>NZ_AP018255.1|WP_096690025.1|6651429_6652689_+|FAD-dependent-hydroxylase
MAQVQISQTLENLQITTNPNGYDYDLVIVGGGIVGLTLASALKNSGLNILLIEARVESAAVMKGQAYAVHMLSALIYEGIGVWNKILPNIETYRRVRLSDGDYPGVVEFSTADINKDDLGYVAEHQALLYPLQEFVKTCPNVTVLCPASVLETEYLVDAAVTTIQVASEIKTIRSKLLVAADGSRSRVREAAGITTRGWKYWQSCIVAFVKPEKSHNQTAYEKFQQSGPFAILPLPGNRCRIVWTAPHSEAKALCALNDEQFLAELQARYGDHMGKLELLGERFVFQVQLMQSDKYVKNRLALIGDAAHNCHPVGGQGLNLGIRDVAALAQVIQEAHVAGKDIGNIKVLKKYERWRQIENLTILGFTDILDRVFSNNFLPIVIVRRLGLLAMKYIPLIKVLSLKLMIGLLGRTPKIAQR
>NZ_AP018255.1|WP_096690026.1|6653041_6655306_+|HAMP-domain-containing-protein
MVVQKVSKKAPLRLLLVMSFVLQVFAVVGLVGYFSFIRGQKAVNNLANQLMDKTSQQVDIHLDNYLALPLQIAQMNLNAIATGNLDINNRTKSERYFWQQAQAFKNITYVGYSLKDGTEVGAGRWIKGLDVVIYENLKGLGKASDYATDVQGNRKERLQSYDYDPLSESWYQEAIKAGKLIWNRIYVAQNTSIEVTQAAKKLKTHNVTVDNSLKYYVAAAVGSPFYDKNGNLLGTVGVDLLLSDISKFLYSLKVSPKGQVFIMERNGLLVGTSTTHSILYEVNDKVERYSALKSPDPLIRTVASGLQKQFGNFKNIESVKNSQEVNITYNGERYFVRVTPWQDERGLDWLMVVTVPESDFMAEINANTRTTILLCLAALGITVLLGVCIASSITKPILQLAQATEAISTGKLNQIVKESKIYEIDILSLSFNRMAQQLRSAFTALETTNQKLEQTNAELETRVLQRTKALENTLHELKQAQAHLVQTEKMSALGQMVAGVAHEINNPVNFISGNLTYVNTYTQDLLKLIQVYQKTLPFPPDDVQSVIDEIELEFIQEDLNKILTSMQIGAKRITEIVLSLRNFSRLDEADFKEGDIHEGIDNTLMILQNRLKMQPHRPEIQIIKQYAKLPLVKCYAGQLNQVFMNLLSNAIDALEESYAQHKTQNPTITISTHITVDNMVSIYIIDNGKGIDENIKNKLFDPFFTTKPVGKGTGLGLSISYQIVVEKHCGRLWCDSIPGQGTKFVIEIPIITTK
>NZ_AP018255.1|WP_096690027.1|6655306_6656083_-|slipin-family-protein
MGTLIGTFFTFLIILSLSGLKLDREYQRGVIFRLGRTNGVRGPGMYWILPFIDQKAQVDIRTKTVNIEPQETVTADSVTIRVNAVLFYRILDPSKAINKVEDYQAAVYQAALTTLRNVVGQNILDDVLQNRDKINIKVQEIVDEITEPWGIVIERVEMKDVEIPTSMQRAMAKEAEAIREKRARIIKAAAEQEASIKLAEASKLIAENPAALELRRLQMLTEVGAENNTTTVVMLPSDFLNMARKLSEAPHIEQQQVK
>NZ_AP018255.1|WP_096690028.1|6656330_6658628_+|transglycosylase-SLT-domain-containing-protein
MAFNKRHFQRVEMLKKLQKKQISLIAGAGLCAFLAGALVSAPEIGKNFGNLFKSGRDKPELLTEETKAKSAVLPLVVQSPQERTAKLEAIAKGSESIDRNRARYLLANDLIDLKDAKNALKQLEGLENDYTQLAPYVILRQAQAHEMLGEDGKASDLRQKVIKDYPTHAATAKALYLISTKEYQDKAIAQFPSHPLTWEIAKKRLSENPNQPQLILLLAKYSFDQPGITEVLNKLEGDPTLKPEDYEVLGTAYWENKEFGKASRAYSKAPRTARNLYRTGRGLQVGGQREQAASYYQALIKEFPEARETGTALIRMAEIASNKKDALPYLDAVISKFPDKAGAALVQKADILKSLNDGKGVEAARKLLIDKFGNTEEAAEYRWKVALDKAKAKDYKAAWQWAEPIATNNPDSILAPRASFWVGKWASLLGKQNEAKQAYEYTVSNFPFSYYSWRSAGLLGLNVGNFNNLRQLNPKVVELVRPVPTAGSETFKELYLLGQDRDAWLQWNSEFQNKMQPTINEQFTEGLMQLARGENLKGIGTISTLEDRDAPEDLAQYQALKKQLIYWQARYPFPYIDLIEKWSAQHKVNPLLVTAVMRQESRFEKKAKSTAGATGLMQVMPATAQFIAPQIKQDIKNIKLEDPDNNIMLGTWYLGHTHDQYQENSLLAIASYNAGPGNVSKWLTTLPKDDPDNFVENIPFDETKNYVRQVFGNYWNYLRLYNPETSQIVSKYSTEHPKLPHEGSQDQPTATQKPATAQPAEKPKQ
>NZ_AP018255.1|WP_096690030.1|6658920_6661644_+|protein-kinase
MPLTLKVPDYEITEVIHEAENTTVYRAKSQKTNMPVILKVYQAEFPTLEQINRLEREFKISENLDLEGVVKVYGLETYQNHLILVMEDFGGISLKNFLSTNNLSLETFLVIAVQLAQSLESLHGRSIIHKDIKPSNIIINPQTLQVKITDFSIASTFQDVELGNSTQLEGTLSYISPEQTGRINRKIDYRSDFYSLGITFYELLTGQLPFASNDPLEVVHAHTALEATPIRELNQKLYEEIPETVISIITKLMAKNPDARYQSASKLRVDLQQCLSECKTVSKVTQEQKYPELLPSKHEPERYSTITSTKSTTTSKEVLDLATIIKATSAISSEIVLDKLLLKLLHIIIENASAQIGCIILERNKQLFIEVADTNQDASVVQLQSTPVNVSSDIPVTVVDYVAATKKPLILTNASLEGIFQKDSYILNKQPKSILCTPIFYQSKFIGIVYLENNLLTGAFTQERLEILQVITSQAAIAIENARLFSAEQQKSQQLAQQEQQYRGIFEAVTDGINIIDIETGELLEVNPAYYTMHGYTHDEFLQLNPANYIHPNSYPKFTEFINTVKSGRAYYTQATDIHKDGTLLDIEVKCIPYNLNGRACALTVIRDISEHKRALEELEQTLAKLQRTQSQLVQTEKISQLGQLVAGVAHEVNNPVSFINGNLTHAKQYIEDIVNLVNLYQEKYPNPDNDIKTKIENIDLDFVLEDLPKLIISMKLGTDRIRDIMQSLRNFSRSDTGEKTKIDIHQSINTTLIVLSHRLKAKPERPAIQIIKQYGKLPLLPCYSGQINQVFMNLLANAIDALDESNIGKTYLEIEKNPNQIKITTELVNDTRSYIQIRITDNGLGMTEEVRQKLFNAFFTTKVEGKGTGLGLSISHQIITEAHAGTLECFSSPGQGAEFVIKIPQM
>NZ_AP018255.1|WP_096690031.1|6661764_6662589_-|DUF4343-domain-containing-protein
MVNWIVEDGVFGSSIIPLVSEIQNQGHQVRVIDYSKEDTDFTRFFPEDECILFYGSIHVASKILILPWAPGVIGRIEHYYCTNYYQYLSKWLLNTPYYILSLKDLCYRVAHHDSDIENLAKSKRLFVRPDSPLKLFPGNVYSLGELDNLQMFMRCHYLEDENILVVVAKERQIDGEWRVIVSDGKIVGASQYKQFGKPFYTGRMLEEVLLLAQEVAGCGWQPDSIWVLDLCIFEGKAYILEIGFFSCAALYRCELSSVVREASRIALLEWRKKV
>NZ_AP018255.1|WP_096690032.1|6662788_6663367_+|WD40-repeat-domain-containing-protein
MLNQSSLLSKTCQMIDSTFRLWNVSDGECIQIVQAHSDKVYSIALSIDGKMLATSSSDCTIKLWNFYTGEYIKTFRGHTDTVEFLTFSPDSQTLISSSYDQTIKLWDIGTGECLKTLQDHFGSVWSVAVNSFGTTMASTSHDNTIKLWNFKTGECLITLKHSRPYEHMNITGVKGLTEVEITTLKALGAVSD
>NZ_AP018255.1|WP_096690033.1|6663777_6665382_-|2-isopropylmalate-synthase
MSNSTQDRIIIFDTTLRDGEQSPGATLNIDEKLVIAKQLARLGVDIIEAGFAFASPGDFEAVSKIAQTVGTENGPIICSLARARHDDIKAAAEAIKGAAKGRIHTFIATSDIHLEYKLKKTRSEVLAVAEEMVAYAKSFTNDIEFSPEDAGRSDPEFLYEVLEKVINAGATTVNIPDTVGYTTPSEFGALIKGIKENVPNIDKAIISVHGHDDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQYFNPFFGKPANSEESLTNIDTRQLYKTSRLVSSLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQLIGLTENQIVLGKHSGRNAVRTRLKELGYELSETDLNKAFVRFKEVADKKKEITDWDLEALVNDEIKQAPELFKLELVQVSCGDHARATATVTLRNPSGEELTDAAIGTGPVDAIYKAINRVAGVPNQLIEFSVQSVTAGIDALGEVTIRLQHEGRVFSGHAANTDIIVASAQAYVNALNRLYASSQQQRQHAQLAINS
>NZ_AP018255.1|WP_019491762.1|6665479_6666004_-|NYN-domain-containing-protein
MGTTMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKYEQSETTLINAFWYTGLKDPQDQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELLRSKNTHITVVSTEGMIARELRNATDRYIDLNDIREVIEKTEGP
>NZ_AP018255.1|WP_096690034.1|6666844_6669178_+|CHASE2-domain-containing-protein
MNEEPTPTLTKKYVPATDQQSSRTTKSTSTTGARQYKKIARFGHWLAFVWTVGAGLLTISSLRLPSMMENQAQSAFYQFRGSIAPPKDIIILAIDDASISTPAVSYATDPVKYGHLEPLKGFPYKREAYARVIEKLVQAGARVVALDVIFDLPSSYGEEDDRKLQAALQRYGSKVVLAASYETFDTDSGSITQLRSPQGQLRVGSVSTGSVNFPIEVDGKIHRFAGEYTKELTETQGSLLDKIPDFSTATLRAANIDYPKPLGDRIYYRGSAGSFEQIPFWHVFDQMFWDSNLQSGKVFKDKIVIIGATATAANDFHSVAVNWLFPERMAGVEIHANAIATLKQGNSVRIAFNTRYRSSLFVLVLVGGSAYFISRKKYNRVRVFTSFSIAIAWGVINYILFVSSQLFLPTAIPIIALLAIGLSYLGIEIAIQQLRKIQLVDIIQKNPYSRIAQEILSQQEDLIDLLKKREIQISGKILDGRYRIVKVLGSGGFSETYIAEDTRLPGNPLCVVKQLQPVNNKPEQLEVARRLFSSEAQTLQQLGTHPQIPQLMAYFEEDEEFYLVQEFIDGNSLSQELPSGKRHNQGVVIEMLCELLQILKFVHQKGVIHRDIKPSNIMRRKSDHQLVLIDFGAVKQVSTNLLENLEDTAFTIGIGTKGYAPREQCFGRPQYSSDIYAVGMIGIKALTGVSPHELQHDDNGELIWIERAEVATSFANILNKMVRDSFQERYQTATDALNALNKLISADNIQPLPLDNLSINTQSLEDSEVPTIPWDGN

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Crispr_ID: NZ_AP018255_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_26

6901980-6902092

Orphan

A:N

Consensus_repeat	Method
ATGAAGCTGCAAATAATTAAATCCCCCCCTGCCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_26

>merge|NZ_AP018255|26|6901980-6902092|CRISPRCasFinder
ATGAAGCTGCAAATAATTAAATCCCCCCCTGCCCCCAATACTGGAGTACTTAGAAGGCGCCTCTATTAGAGGAGTGAATGAAGCTGCAAATAATTAAATCCCCCCTGCCCCCC

>NZ_AP018255|26|25|6901980-6902092|CRISPRCasFinder
ATGAAGCTGCAAATAATTAAATCCCCCCCTGCCCCC	AATACTGGAGTACTTAGAAGGCGCCTCTATTAGAGGAGTGA
ATGAAGCTGCAAATAATTAAATCCCCCCTGCCCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096694328.1\|6886531_6886780_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690191.1\|6884926_6885157_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694330.1\|6909154_6910159_-\|2,3-diaminopropionate-biosynthesis-protein-SbnA	unknown	unknown	gnl\|CDD\|274872
NZ_AP018255.1\|WP_096694332.1\|6912153_6915426_-\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|341253
NZ_AP018255.1\|WP_096690190.1\|6881294_6884702_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_AP018255.1\|WP_096690194.1\|6902226_6907311_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_AP018255.1\|WP_096690189.1\|6877125_6881298_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_AP018255.1\|WP_096694329.1\|6891181_6891367_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694331.1\|6910749_6910992_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_AP018255.1\|WP_096690197.1\|6910975_6911449_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690192.1\|6896161_6896482_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379210
NZ_AP018255.1\|WP_096690196.1\|6908027_6909059_-\|2,3-diaminopropionate-biosynthesis-protein-SbnB	unknown	unknown	gnl\|CDD\|274871
NZ_AP018255.1\|WP_096690187.1\|6873563_6874517_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694327.1\|6875825_6877106_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_AP018255.1\|WP_096690188.1\|6874448_6875675_-\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|365904
NZ_AP018255.1\|WP_096690193.1\|6897339_6901434_-\|sodium:calcium-exchanger	unknown	unknown	gnl\|CDD\|367364
NZ_AP018255.1\|WP_096690199.1\|6917066_6920423_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_AP018255.1\|WP_096690200.1\|6920525_6920942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690198.1\|6911789_6912131_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690195.1\|6907382_6907892_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380454

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096694330.1\|6909154_6910159_-\|2,3-diaminopropionate-biosynthesis-protein-SbnA	gnl\|CDD\|274872	TIGR03945, cysteine_synthase, 2,3-diaminopropionate biosynthesis protein SbnA. Members of this family include SbnA, a protein of the staphyloferrin B biosynthesis operon of Staphylococcus aureus. SbnA and SbnB together appear to synthesize 2,3-diaminopropionate, a precursor of certain siderophores and other secondary metabolites. SbnA is a pyridoxal phosphate-dependent enzyme. [Cellular processes, Biosynthesis of natural products].	5.17922e-177
NZ_AP018255.1\|WP_096694331.1\|6910749_6910992_+\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	5.21007e-16
NZ_AP018255.1\|WP_096694332.1\|6912153_6915426_-\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|341253	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	1.2088e-168
NZ_AP018255.1\|WP_096690190.1\|6881294_6884702_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_AP018255.1\|WP_096690194.1\|6902226_6907311_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_AP018255.1\|WP_096690188.1\|6874448_6875675_-\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|365904	pfam00145, DNA_methylase, C-5 cytosine-specific DNA methylase.	3.99185e-62
NZ_AP018255.1\|WP_096690192.1\|6896161_6896482_+\|AAA-family-ATPase	gnl\|CDD\|379210	pfam13476, AAA_23, AAA domain.	1.73163e-10
NZ_AP018255.1\|WP_096690196.1\|6908027_6909059_-\|2,3-diaminopropionate-biosynthesis-protein-SbnB	gnl\|CDD\|274871	TIGR03944, ornithine_cyclodeaminase, 2,3-diaminopropionate biosynthesis protein SbnB. Members of this protein family are probable NAD-dependent dehydrogenases related to the alanine dehydrogenase of Archaeoglobus fulgidus (see TIGR02371, PDB structure 1OMO and ) and more distantly to ornithine cyclodeaminase. Members include the staphylobactin biosynthesis protein SbnB and tend to occur in contexts suggesting non-ribosomal peptide synthesis, always adjacent to (occasionally fused with) a pyridoxal phosphate-dependent enzyme, SbnA. The pair appears to provide 2,3-diaminopropionate for biosynthesis of siderophores or other secondary metabolites. [Cellular processes, Biosynthesis of natural products].	7.75359e-151
NZ_AP018255.1\|WP_096694327.1\|6875825_6877106_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.68812e-59
NZ_AP018255.1\|WP_096690189.1\|6877125_6881298_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_AP018255.1\|WP_096690193.1\|6897339_6901434_-\|sodium:calcium-exchanger	gnl\|CDD\|367364	pfam03160, Calx-beta, Calx-beta domain.	1.16082e-13
NZ_AP018255.1\|WP_096690199.1\|6917066_6920423_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_AP018255.1\|WP_096690195.1\|6907382_6907892_-\|hypothetical-protein	gnl\|CDD\|380454	cd19531, LCL_NRPS-like, LCL-type Condensation (C) domain of non-ribosomal peptide synthetases(NRPSs) and similar domains including the C-domain of SgcC5, a free-standing NRPS with both ester- and amide- bond forming activity. LCL-type Condensation (C) domains catalyze peptide bond formation between two L-amino acids, ((L)C(L)). C-domains of NRPSs catalyze peptide bond formation within (usually) large multi-modular enzymatic complexes. NRPS can use a large variety of acyl monomers (approximately 500 different possible monomer substrates as opposed to the 20 standard amino acids in ribosomal protein synthesis) to construct bioactive secondary metabolites of 2 to 18 units long (with various activities such as antibiotic, antifungal, antitumor and immunosuppression). In addition to the LCL-type, there are various subtypes of C-domains such as the DCL-type which links an L-amino acid to the D-amino acid at the end of a growing peptide, starter C-domains which acylate the first amino acid with a beta-hydroxy carboxylic acid, and heterocyclization (Cyc) domains which catalyze both peptide bond formation and cyclization of Cys, Ser, or Thr residues. Typically, an NRPS module consists of an adenylation domain, a peptidyl carrier protein (PCP) domain (also known as thiolation (T) domain) and a C-domain. NRPS modules may also include specialized domains such as the terminal-module thioesterase (Te) domain that releases the product via hydrolysis or macrocyclization and any of various C-domain family members such as the epimerization (E) domain, the ester-bond forming C-domain, dual E/C (epimerization and condensation) domains, and the X-domain. Streptomyces globisporus SgcC5 is a free-standing NRPS condensation enzyme (rather than a modular NRPS), which catalyzes the condensation between the SgcC2-tethered (S)-3-chloro-5-hydroxy-beta-tyrosine and (R)-1phenyl-1,2-ethanediol, forming an ester bond, during the synthesis of the chromoprotein enediyne antitumor antibiotic C-1027. It has some acceptor substrate promiscuity as it has been shown to also catalyze the formation of an amide bond between SgcC2-tethered (S)-3-chloro-5-hydroxy-beta-tyrosine and a mimic of the enediyne core acceptor substrate having an amine at its C-2 position. C-domains typically have a conserved HHxxxD motif at the active site; mutations in this motif can abolish or diminish condensation activity. An HHxx[SAG]DGxSx(6)[ED] motif is characteristic of LCL-type C-domains.	3.69468e-47

>NZ_AP018255.1|WP_096690193.1|6897339_6901434_-|sodium:calcium-exchanger
MANILGSDNNDNLIGTTGNDTIQGLGGNDSLSGGGGDDSLEGGSGSDTLTGGAGNDQFVLEYFNGSSFTQNQDLVTDFVKGQDKIDVRKIGISDYNTILALLKDDPDANALITVRYNLNDGNYYYQLKLNGISQSQLQASDFNFNTAVVNDTLSGTNDNDDLFGGLGNDTLQGNAGNDRLFGEQGDDRLFGGYGSDTLYGGAGNDQFVLEYFSGSSFTQNQDVVTDFVKGQDKIDVRNIGISDYNTILTLLKDDPDGNALITVRYNLDSGNYYYQLKLNGISQSQLQASDFNFNAAVVNDTLSGTNNNDDLFGGLGNDTLQGNAGNDRLFGEQGDDRLFGGYGSDTLYGGAGNDQFVLEYFSGSSFTQNQDVVTDFVKGQDKIDLRNIGISDYNTILTLLKDDPDGNALITVRYNLNDGNYYYQLKLNGISQSQLQASDFNFNTAVVNDTLSGTNDNDDLFGGLGNDTLQGNAGNDRLFGEQGDDRLFGGYGSDTLYGGAGNDQFVLEYFSGSSFTQNQDVVTDFVKGQDKIDLRNIGISDYNTILTLLKDDPDGNALITVRYNLNDGNYYYQLKLNGISQSQLQASDFNFNTAVVDDTKSGTNDNDDLFGGLGNDTLQGNDGNDRLFGEQGDDRLFGGYNSDTLYGGAGNDQFVLEYFSGSSFTQNQDVVTDFVKGQDKIDLRNIGISDYNTILTLTSNDSAGNALITTRYNLNDGNYYYQLKLNGISQSQLQASDFNFNAAVVNDTKSGTNNNDDLFGGLGNDTLQGNAGDDRLFGEQGDDRLLGGTGNDTLYGGADNDIAVYLGNRSQYQITNNGGVYTVSDTVANRDGRDNLYNIERIQFSDQTITLDVPPSITLALSPSSVLEDGATNLLYTFTRTGSTTNTLTVNYNVAGSAVFNTDYTQTGAASFTATTGTITFAAGASTAVLSIDPTADTTIEGNETLGITVATGSGYIVSTTSAVTGTITNDDTSAITINLSNNQTIVEGLTSPQQATYTVSLSQASTQAITVQYATTNGTAIAGSDYTSANGTLTFNSGETSKVINIPILNNSTNEANETFTLRLSSPTNAILGTTSSVITTITDTLSAAVTTTLPINVENLTLTGTAAIDGTGNAGDNILQGNSANNTLTGGAGNDTYAFVANSVLGIDRIVETATGNTDTIDFSGTTVGVRLNLGVTTQQTVNANLKLILSGNNVIENARGSSLSDRLTGNSLNNYLIGDSGNDQLQGLAGNDTLWGGLGNDILAGGAGQDKYLFQGSGAFTSALGVDYITNFDAGQDLIVLSKATFTAITNSAGQALTDFAVVNDDEFVNGSNASIVFSQGSGSLFYNQDRSLLGANKVFEFASLGNADITLTGSNFSLVP
>NZ_AP018255.1|WP_096690192.1|6896161_6896482_+|AAA-family-ATPase
MRIETLHIQNFRGLQDITINFPRINLAVFIGINGAGKSTILDCIATMLAQFTAKLRNRELADIEFNENDIRLNSKSSINTITISVEDGEKISWRDNKSGNSNILLP
>NZ_AP018255.1|WP_096694329.1|6891181_6891367_+|hypothetical-protein
MVIVSSPAAALMTSFPLPPLIISLPPAPVRVSSPAPPLRIPPVVLLARILSLSLPLPPVTE
>NZ_AP018255.1|WP_096694328.1|6886531_6886780_+|hypothetical-protein
MISSPAPPSSVSLPAPPLRVSLPNSPLRLSSPLSPLMMSSPALPLRMLLPLLPVIRLLSVLPVPERLLLPVKIRFSKFSPKV
>NZ_AP018255.1|WP_096690191.1|6884926_6885157_+|hypothetical-protein
MSKPQLSIIGAKRSIVSVTGTITWHKMTPYASNCVSDKFWFKLSNLGGASNYKNSTLVDDVLIRVREYKIQQLADS
>NZ_AP018255.1|WP_096690190.1|6881294_6884702_-|non-ribosomal-peptide-synthetase
MSNLSQRIANLSPEKLALLQQRLIKKDNTSVAQKIIPRRKTSEPCPLSFSQQRLWFLNQLEPLSPFNISIAVRLDGTLNLQALQQTLNAIVARHEALRTNFVSVDENPIQVIAEIQTVKITLIDLSELCNTDPEAEIEQILKKETQYPFNFSSDLMLRSTLLRLSEEEHILLLVMHHVASDGWSVGILYKELAGFYEAFLTGNPSPFPELPIQYADFAHWQRQWLSGDTLQTQLNYWKQQLKEAPTILSLPTDKPRPPIQTFKGGTKHFQLNQDLTQKLKTLSTLSGATLFMTLMAAFATLLSRYSGQEDIVIGTPIANRNRSEVESLIGFFINTLVLRNKLQGNPTFLELLERVRETTLGAYDHQDLPFEKLVEELQPERTLSHTPIYQVMFVLQNAPIGTFELPGLTLTPLELEDAAARDDLFLSMMETETGLSGELVYNSDLFEITTIERMVIHFQTLLESIVKNPLQQVAQLPLLSATEQHQLLVEWNDTGADYPLEQTFTQQFEAIVEKNPLSIAVGFENQQLTYQQLNARANRWARHLVSLGVEAETIVAINSERNIDLLTAMLAVFKAGGAYLPLNPHHPVERNRQVLEQSQVSLVLSAKSWSSDLQTGKDAHSTNQLLLLLEDLDSFDYSSENLKGRSTPENLAYVIYTSGSTGKPKGAMLEHRGMLNHLYAKVNDLQLTQTDIVAQTAAQTFDISIWQFLVALLVGGRVEIVPTEVTTDPAELLTLVQSKQISILEIVPSLLRMMLEHISSSNKPNLSQLRWLLLTGETLPPQLCRQWFEYYPAIPMMNAYGPTECSDDVTHYPIYTPPAQEVLNLPIGRPVSNTQLYILDKHLQPVPIGVPGELYVGGVGVGRGYLYNSQQTQLAFVKNPFRDITQKSATPLRSTFPTPAREWLLRTQNLLYKTGDKARYLKDGNIEFLNRIDYQVKIRGFRIELGEIEAVLTQHPQVREVVVIARSDQPGNQYLVAYIVSDVLNTSQLRDFLKQKLPEYMIPAAFVMLESIPLTPNGKVDRRALPEPDVQQSLIFAPPHTPTQKILAQLWLEILNLKEVGIHDNFFELGGHSLLATQVISRLRFLFGMELPLRQLFEAPTIAALADSIDKILATVQKLQITSSYQQDEREEIEL
>NZ_AP018255.1|WP_096690189.1|6877125_6881298_-|non-ribosomal-peptide-synthetase
MKTIQEFLSNLANSDIKLWLDVNETTSEEVRLRCNAPKGTLTPDIRTHLAERKAEIISFLQQGIESNSTVEAITPIGRDINLPLSFGQARLWFLYQLEGQTATYNIPVTLRLFGELNTAAFEMAVQEIVRRHEVLRTNFKMVNDSAVQVIAGQPTVTISIVDLQQVPYLEQSNKVQQLALSEVQKPFDLSNDSLLRVTLLRLSEKSHVLLLTMHHIISDGWSMGVFINELSELYQAFCNGQPSQLPELLIQYADFAYWQRHWLSGEVLQTQLNYWKQNLTGIPPLLELPTDRPRPSVQTFQGSFTEFLLNQELTSQIKALSQKSGTTLFMTLLAAFATLLSRYSGQEDIVIGSPIANRNRSQVESLIGFFVNTQVLRTKLHGNPNFSELLERVRETTLGAYDHQDLPFEKLVEELQPERSLSHTPLFQVMFVMENTPIGKLELPGLTITPLELENITAKFDLTLSIEETASGLLCGWEYNSDLFGVTTIEQMAVHFQTLLESIVKNPLQRVAQLPLLSATEQHQLLVEWNNTGADYPLEQTFTQQFEAIVEKNPLSIAVVFENQQLTYQQLNARANRWARHLVSLGVGAETIVALNSERNIDFLTAMLAVFKAGAAYLPLNPDHPTERNRQVLEQSQVSLVLSASSWSSLVNHLETEPQLLLLEDLDSFDYSSQNLPVRSTPENLAYVIYTSGSTGKPKGAMLEHRGMLNHLYAKVTDLQLTQTDIVAQTAAQTFDISIWQFLVALLVGGQVEIVRTSITTDPAELLTLMQSKQISILEIVPSLLRMMLEHIELSSNNKPNLSELRWLLLTGETLPPQLCRQWLEYYPAIPMMNAYGPTECSDDVTHYPIYTPPAEEILNLPIGHPVANTQLYILDKYLQPVPIGVPGELYVGGVSVGRGYLHNSQQTQLAFVKNPFRDITQNSALRTQHLLYKTGDKARYLFDGNIEFLNRIDYQVKIRGFRIELGEIEAVLTQHPQVREVVVIAREDQPGNQYLVAYIVPNSVLSNKELRDFLKQKLPEYMIPTAFVMLESIPLTPNGKVDRRALPVPELSSSDNFVAPSDMLELELTQIWEEILHVHPIGVRDNFFDLGGHSLLAVSLIARIQQKFNKKLSLAALFQGATVEHLANIIRSSTDFSSSSTLVTLQQGDSKRRPLFCVHPGGGTVLAYLNLARHLDPAQPVYGLESLDLDDEQKLHNKVEDMAAFYIEVMQSVQPQGPYLIGGWSFGGLVAFEIAQQMQAQGQQVSLLALLDTYPFTEYEELNEADDVDFITELLARNNGAILGIPPELDAVQAQRLLQVFKGHILAANDYNPQPYPGKVALFLAEGGIAADSVSPIIGWEKLATKGVDIHWVPGDHHTMVSKPNVEILAQKLQICLEQLQANDGGKND
>NZ_AP018255.1|WP_096694327.1|6875825_6877106_-|MFS-transporter
MRVFILVWFGQMVSLIGSGLTSFALDIWIYQRTGSVTQFALAFIFSQVPPILVSPFAGALVDRWNRRYCMILSDCGSGLSILAVALLLFTNRLEIWHVYIATAVSSIFNAFQWPAYSASISTLVPKQHLARANGMTELGDALKMLLPPVLGGALLVTIQLRGVILIDFITFLFSMITLLLVRFPNIKTTPQEEFGKSSLLSEVTYGWKYITSRPGLLGLLIFFGACNFILAIVSVLLTPLVLSFTSPAILGIILFIDGIGMLIGTIVMSTGKMPSRQIYSILGFQMLGGLCILVTGLSTSVALVAVAAFLFAFGSPIINCSSQIIWQRKVAPSVQGRVFAVERMIVSALQPIAYIIAGPLADRVFEPLMATNGSLAGSIGQLIGVGTGRGVGLLFMIMGAISILISIVAYQYPRLRLVEDELPDQI
>NZ_AP018255.1|WP_096690188.1|6874448_6875675_-|DNA-(cytosine-5-)-methyltransferase
MVIDTLRPVISTQNLLFAEFFAGIGLVRKGLEQEGSWQCAFANDIDKFKADIYTRNFGKDDFLLDDIANIYANSIPDVTLVTASFPCQDLSLAGNRKGLTGNRSGTFFELIRIINELKTEKRLPSAVLLENVTGLLNSNNGKDIREVILSLNQLGYSCDVLVVNAAYFVPQSRPRVFIIGLNTSMSESLTNTGLKNISSNNTIYFQHPCRPSSVQKIVAANPDLSWNFLDIPPLPIRKTDLADIIEINENQKWFNNVELARELSYIRDNSKNRLDKASSDAQTTGKTIYLTGYRRMRKGLICLETRNDSIAGCLRTASGGSSRQILIVVSPLAIKMRYMTAREYARLQGVEDSFWIPQNENLGRFAFGDAVAVPVITWIGREIKRHLVINSQCPVLLNHVTEISVVNA
>NZ_AP018255.1|WP_096690187.1|6873563_6874517_+|hypothetical-protein
MFWSENTSNCTTMDLQHPASLALLAFLESEISQNRALGDYQTMLRALWNKRKNSDLHQTPTTLPKGYRSRTVREYVRKKFGALLPYWGPTAIRGDLTDKKAHISTFISLVNELSNDAVEVDRVFELAAKMVADYINAKSPIIQLPEASQPQQVLISLLNTKSRGRVQQGIVYALLKTLYEGVPHTTVRTKSVFAGDAQSGQLGDIDVIEQEIILSVFEVKAQALNISTYEEVIRTHSISGERHYPVFILAESFQPDLFEEIQNVFIIRLRDFCLSILAEIVISKRISTEDSIRQVLSVYNTDFCDMIQQDRTLRVDY
>NZ_AP018255.1|WP_096690194.1|6902226_6907311_-|non-ribosomal-peptide-synthetase
MCIVMQFSNLSATEQHQLLVEWNNTGADYPLNQCFPQLFEAQVEQSPNAIAVIFEDVQTRLIASLTYQQLNARANRWARHLVEQGVGAETIVALNSERNIDFLTAMLAIFKAGGAYLPLNPHHPPERIRQVLEQSQVPLILSAKSGTLLDAHSTNKVLWLEDLDYQEHSSENLPVRCSPLNLAYVIYTSGSTGKPKGAMLEHRGMLNHLYAKVTDLQLSQTDIVAQTAAQTFDISIWQFLVALLVGGKVEIVSTEVTADPAQLLSLVERQRISILEIVPSLLRMILQLIDDGYTKPNLSELRWLLLTGETLPPQLCRRWLNYYPHVPMMNAYGPTECSDDVTHYPIYVAPQEEILNLPIGRPVSNTQLYILDSQLKPVSIGVPGELYVGGVGVGRGYLYNESLTQQAFIKNPFSSVAGARLYKTGDKASYLPDGNIEFIGRIDYQVKIRGFRIELGEIEAVLQQHPQVQQVVVIAIDQPGNQYLVAYIVPSQEIEKSELRNFLKQKLPDYMIPGAFVMLESMPLTPNGKIDRRGLPVPNLEQTDNFIPPSTPTQEILARLWAEVLNLKQVGIYNNFFELGGHSLLATQVISRLRSLLSIDLSLRQLFENPTVASLSELIDSYNTKEAQVPEITPVPRNEYLPLSFAQARLWFLDQLEGGSATYNMPEPLRLMGKLNVAALEMAVQEIVRRHEALRTTFKMVNGSPVQVISNGINITIPVINLQHLPEQSQSAQVQQLAQCELHKPFDLSNGALLRVTLLRLGEQSHVLLLTMHHIVSDGWSMGIFISELSALYQSFSAGKPSQLPELIIQYADFAHWQQQWLSGEVLQTQLDYWNQQLAAAPPLLELPTDRPRPSIQTFQGGTEYFKLNQELTNKLKTLSQKSEATLYMTLLSAFATLLSRYSGQEDIVIGSPIANRNHSGIESLIGFFVNTLVLRTQLQDNPTFVELLERVREMTLGAYEHQDLPFEKLVDLLQPERSLSYTPLFQVMFALQNAPSSKLELPDLTMTPFKMENVAAKFDLTLLIEETEAGLNGELVYNKDLFDAATINRMAGHFQTLLEGIVANPQQFVMQLPMLNTAELHQLLFEWNDTQVDYPQDKCIHQLFEEQVEQAPDAVAVVFENEQLTYRELNNRANQLAHYLQTLGVAPDVLVGICVERSLEMIVGLLGILKAGGAYVPLDPAYPQDRLSFMLSDSQLKVLLTQEQLVANLPEYTGQIIDLDTDWKLISQHNINVNSNVQPSNLAYVIYTSGSTGKPKGVLVAHQGLCNLAQAQISTFDVQPDSRVLQFASFSFDASISEIVMALCAGATLCLGTRESLLPGRNLMQLLQNERITHVTLSPSALAAMPIVGFPDLRTIIVAGEACPPDLVNQWSSERRFINGYGPTESTVCTTTAVCTNSKSQPPIGRPIANIQVYILDRHLQPVPIGVPGELHIGGAGLARGYLNRPELTQEKFIPNPFSKEDSARLYKTGDLARYLLDSNIEYLGRIDQQVKIRGFRIELGEIEALLSQHNQVQEAVVVVKDELGNKRLVAYIVPNHEAPSTSELRSYLKEKLAEFMIPSAFVMLEFLPLTPNGKVDRKALSRQEIAHSELDFVAPRTPVEEILADIWAEILRVERVGVYHNFFELGGHSLLATQVISRIQDALQVKIPLRTLFEKQTIADLAVSVVECLASETELEEMELLLAELEKLEESL
>NZ_AP018255.1|WP_096690195.1|6907382_6907892_-|hypothetical-protein
MIDYCTTHDTAELTEKQLSYCLHNISTTFRLVGLLNVEILKQSLNEIVQRHETLRTTFTIIDELKGTITAPYLSLTLPVVDWRQLSQEEQLIEVLLLATEEVQQPFYLINKPLLRATLLQIDEQEHVLLIVMHHIINSNWSTEEFIKEIATLYEASSIKSLSFTHIFSV
>NZ_AP018255.1|WP_096690196.1|6908027_6909059_-|2,3-diaminopropionate-biosynthesis-protein-SbnB
MNQDDILFLKGDEIITLFKNRDQEILQAVKSAYQIHAQGDSCLPHSNFLRFPNNEKDRIIALPAYLGGGVNTAGIKWIASFPGNLALGMERASAVLILNSAQTGHAQAIMESSVISAKRTAASAAIAAQSLRGQQTVTTLGLIGTGLINFETVRFLLTTCPNIKTLLIYDLSLERAEQFKFKCQQLSNRLEIAIVSDEHAIFENSEVISFATTATKPHISDIYKCRPGTIILHISLRDLAPSVILSADNIVDDVDHVSRAQTSIHLAEQQVGNRDFIRATIGDILNGVVPSRPDNSKIAIFSPFGLGVLDLALGQLAYKLAREQNQGTTIESFLPIPWLEREE
>NZ_AP018255.1|WP_096694330.1|6909154_6910159_-|2,3-diaminopropionate-biosynthesis-protein-SbnA
MQVLDKVSVSSKANISGLNTGILSIVGNTPLVKLVNVFKNAHFQLFAKLEMFNPGGSVKDRPALNMLMNAFEKGDIQPGDTIIESSSGNLGIGLAQACAVLGLRFICVIDPKTTLPNINILKAYGAQVELVAEPDPVTGDFLPARIARVQSLLASIPNSFWSNQYANLNNARAHHQTMHEIVTALNGNLDYLFLAAGSCGTLRGCAEYIKSHNLNTKIIAVDAKGSVIFGDKRGKRLIPGHGAARVPELFQPGLQDEVIHVTDIDCILGCRHLLRTEAILAGGSSGAVISAIDKKRKEIPVGAICAAILCDRGERYLDTVYSETWVMDHFGDIG
>NZ_AP018255.1|WP_096694331.1|6910749_6910992_+|DUF433-domain-containing-protein
MKLDRITINPARMNGQPCIRDLRLTVRRVIELLATYPNREELYQEFPELEDEDIRQSLIYASICLDDRIIDLPSSYETVA
>NZ_AP018255.1|WP_096690197.1|6910975_6911449_+|hypothetical-protein
MKLLLDPKIQHQQQVYARTKKEKRTKSRCCESNKVYEVDVPYTETVSYYEIDLQLTCQGIQQKIDLQVQNNIELLERVIEKQISEDFQKGEKQINNYIDRFQAEFDYLLKERATREVEAPNIIAHLESQRIELSEYLNELELIEEKLNNWKPVTSGK
>NZ_AP018255.1|WP_096690198.1|6911789_6912131_+|hypothetical-protein
MTNADQPQDITARLDDINVRLEALGDELDLVRTVQDSMRREVRYTNQSMSRLERTVADLADIARDHQQALRLLSQNAERDRETINNDRAVFQAEIRRIWEYLLRQGGNGNSPV
>NZ_AP018255.1|WP_096694332.1|6912153_6915426_-|amino-acid-adenylation-domain-containing-protein
MFLNVETRSRSVPQVNFASPPDIVKTQNFPSPANIVKTRHVASLHYGELNIRSNQIAHYLQKLGVGASVIVALCVDRSIDLVAGMLGILKAGGAYLPLDPSYPTARLNYMLEDAQVKIVLTQQQWVEHLGEHELQIICLDKDWETIAQESQENPHSNITVDNLAYVIYTSGSTGKPKGVQIEHRALLNLVYWHQKAFCISPQDRATQIASVAFDACVWEIFPYLSAGATLYFPDDNTRRAPEQLQEWLNNNAITISFVPTPLCERLLLLDWSNKATKLRILLTGGDKLNYYPATEYPFAIVNNYGPTENTVVTTSGNIPTIGRPIANTQVYILDEHLQLVPIGVKGELYIAGDGLTRGYINNPELTNILWSGHPCPPGVNTGDFHNSSSHKKIYKTGDLGRYLQDGNIEFLGRVDNQVKIRGYRIELEEIEAILNQHPAVQQAVVTTQNTTSQHSLIAYIVLNKTSVETRHVASLHDSLLDEQICQWQMLYNETYNQHATESDPTFNIVGWNSSYTKAPIPAESVREWVNNQVAQILALQPSRVLEIGCGTGLLLFRIAPHCTKYYGTDFSSVSLNYIRQQLANVETKHVKTRLIASLQQRVTLFEKMATDFEGIETQAFDAVVLNSVVQYFPSIDYLTQVLEGAIQATAPGGFIFIGDVRSLPLLEAFHAEVELYQAEPSVTREQLRQRVQMQIFQETELVIDPAFFYALKQRFPQISDVEIQLLRGRDDNELTRYRYNAIVKVGEVDPPNPPYQGGLKNVTQNPTQQGALNNLTQNPPYQGGQGGSILDWNENNLSLLTLRQLLSEKPEILHITNVPNARVTAAVKTAQWISGAEEYKTVSQMREALQRLENLGVDPEDFCALVNELPYSINISWSNSNTEGRYDILFLRQDIINKPTITQLTTQHSALSTQHSNNPLQAKAARKIIPQLQTYLAQKLPKYMVPSAFIVLESLPVNQAGKIDRHAIPQPDTIKKEFSEAYIAPRSDVEKTLVKIFIEVLGIKRCGIHDNFFELGGHSLLATQLASRVRDAFKVELPLSNVFEAPTIAGLSKVVESLKDSNAKSQAPALVPISRDSRRMKLSSLKKDEI
>NZ_AP018255.1|WP_096690199.1|6917066_6920423_-|non-ribosomal-peptide-synthetase
MSSQEVFIFGASFAQQRLWFFDQLLPGNAIYSVPTVIRLHGSLHVGALEFALNEIVRRHETLRTTFTILSEQLVQVIAPSFLISINTLDLRELSTSEREAQAKSIITQEIERPFDLSSEPLLRVILLKVLENEHILLLNMHHIVCDDWSIGVLISELGALYTAKVKNQPSPLSELPLQYADFAEWQREWLTGEVLEKQLAYWRHQLNGITVLPLPTDKRRPNIQSHHGATQFLELPLSLASALEKLSGQEGATLYMTLLAAFQTLLYRYTYSDDIVVGSPIANRNRSEIEGLIGFFVNTLVLRTDFSGNPTFREILSRVREVTLGAYSHQDLPFEKLVEHLQPERNLSASPLFQVVFGFENAPMQELELPDLAPSFMNIDLKTTRFDLELHLWKCSSDFRSLWGGDWQYSEGIRGIVVYNTDLFEDATISRMLKHFTTLLEGIVAEREQRIVNFPLLSEAELDQILFEWNDTQNDYPSNQSIHELFEQQVTQHANNIALNYDNVVETRLIASLQYNELNNRSNQIAHHLQKLGVNTEVVVGICAERSIDMIVGMLGILKAGGAYLPLDPTYPTERLNFMLKDSHAHVLLTQEKFAQHFEDFSNPIVDLNKDWKGAHESKQNLSSETTSDNLACIIYTSGSTGTPKGVAVTHKAVNRLVCNTNYIKITPDDKIAQVSNTSFDAATFEIWGALLNGAQLIGISQDIVLSPNEFASQLKQKDINILFLTTALFQKIARDVPQAFSNLKYLLFGGETIDTRWVKKVLECNRSGEAPQLIHLYGPTENTTFSSYYPIHELPSGTSIPIGRPISNSQIYILDANLQPVPIGVTGEIYVGGDGLARGYINNPELTDILWSNILWSGHPCPPYINTRQSDGRGRPFHKSPSHNTIYKTGDLGRYLPDGNIEFLGRIDNQVKIRGFRIELEEIETLLNQHPTVREAVVIVIEDIPGDKYLVAYIVPQPQQQITTNNLRAFLKQKLPEYMIPVAYVILESLPLTPAGKVNRHALPKIDTLNLNVEENYVAPQTDVEQVLVEIWANILTMRKQPIGVHDNFFELGGHSLLATQLTSRIRDVFHIDLPLRSLFETPTIASLAKYIQMRISTGLNTTSSFNTNIEQEEVEF
>NZ_AP018255.1|WP_096690200.1|6920525_6920942_+|hypothetical-protein
MPFDFMTAPNPPYGNYELSSVDNEPLPGLPKEMNEGADIGEEAAVQRALLTGARFKATNPTVIRCTLMTYFEARKFVEPIDNDDPDAQIQVRLVEMSGTFQGSRHRRGMQTSTRCFNKAYVILRASDGLRLGYSLTKE

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Crispr_ID: NZ_AP018255_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_27

7005478-7005581

Orphan

A:N

Consensus_repeat	Method
GGTTCACGAAATATGAGCGCACCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_27

>merge|NZ_AP018255|27|7005478-7005581|CRISPRCasFinder
GGTTCACGAAATATGAGCGCACCGTTGTAGGATATCTGTAAACCCGCCCTTACAAGATATAGGGCATTTATAACGCGCGGTTCACGAAATATAAGCGCACCGTT

>NZ_AP018255|27|26|7005478-7005581|CRISPRCasFinder
GGTTCACGAAATATGAGCGCACCGTT	GTAGGATATCTGTAAACCCGCCCTTACAAGATATAGGGCATTTATAACGCGC
GGTTCACGAAATATAAGCGCACCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096690265.1\|7003575_7004094_-\|photosystem-I-reaction-center-protein-subunit-XI	unknown	unknown	gnl\|CDD\|367128
NZ_AP018255.1\|WP_019492432.1\|7002418_7002685_+\|DUF370-domain-containing-protein	unknown	unknown	gnl\|CDD\|179823
NZ_AP018255.1\|WP_096690261.1\|6997214_6998405_+\|heterocyst-differentiation-protein-HetZ	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690266.1\|7004430_7004565_-\|Photosystem-I-reaction-center-subunit-IX	unknown	unknown	gnl\|CDD\|235065
NZ_AP018255.1\|WP_096690267.1\|7004679_7005174_-\|Photosystem-I-reaction-center-subunit-III	unknown	unknown	gnl\|CDD\|177054
NZ_AP018255.1\|WP_096690264.1\|7002881_7003499_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_AP018255.1\|WP_096690275.1\|7013882_7014350_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_AP018255.1\|WP_096690260.1\|6996531_6997002_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690263.1\|6999598_7001920_+\|DUF3488-domain-containing-protein	unknown	unknown	gnl\|CDD\|224224
NZ_AP018255.1\|WP_096690269.1\|7006835_7007765_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP018255.1\|WP_096690272.1\|7011184_7012090_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_AP018255.1\|WP_096690274.1\|7012987_7013932_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_AP018255.1\|WP_096690276.1\|7014507_7014888_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690273.1\|7012256_7012850_+\|L-threonylcarbamoyladenylate-synthase	unknown	unknown	gnl\|CDD\|223088
NZ_AP018255.1\|WP_096690262.1\|6998397_6999372_+\|PatU	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690268.1\|7005663_7006701_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_AP018255.1\|WP_096694341.1\|7008923_7009472_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018255.1\|WP_096690271.1\|7010224_7011049_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273383
NZ_AP018255.1\|WP_096690259.1\|6995403_6996372_+\|solanesyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|131796
NZ_AP018255.1\|WP_096690270.1\|7007913_7008633_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096690265.1\|7003575_7004094_-\|photosystem-I-reaction-center-protein-subunit-XI	gnl\|CDD\|367128	pfam02605, PsaL, Photosystem I reaction centre subunit XI. This family consists of the photosystem I reaction centre subunit XI, PsaL, from plants and bacteria. PsaL is one of the smaller subunits in photosystem I with only two transmembrane alpha helices and interacts closely with PsaI.	7.92908e-72
NZ_AP018255.1\|WP_096690269.1\|7006835_7007765_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.60505e-32
NZ_AP018255.1\|WP_096690273.1\|7012256_7012850_+\|L-threonylcarbamoyladenylate-synthase	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	1.26747e-51
NZ_AP018255.1\|WP_096690266.1\|7004430_7004565_-\|Photosystem-I-reaction-center-subunit-IX	gnl\|CDD\|235065	PRK02733, PRK02733, photosystem I reaction center subunit IX; Provisional.	6.84633e-06
NZ_AP018255.1\|WP_096690267.1\|7004679_7005174_-\|Photosystem-I-reaction-center-subunit-III	gnl\|CDD\|177054	CHL00132, psaF, photosystem I subunit III; Validated.	1.67166e-70
NZ_AP018255.1\|WP_096690264.1\|7002881_7003499_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	9.73696e-110
NZ_AP018255.1\|WP_096690275.1\|7013882_7014350_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.71992e-17
NZ_AP018255.1\|WP_096690263.1\|6999598_7001920_+\|DUF3488-domain-containing-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	2.61491e-27
NZ_AP018255.1\|WP_096690272.1\|7011184_7012090_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	3.06316e-97
NZ_AP018255.1\|WP_096690274.1\|7012987_7013932_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.40722e-17
NZ_AP018255.1\|WP_096690268.1\|7005663_7006701_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
NZ_AP018255.1\|WP_019492432.1\|7002418_7002685_+\|DUF370-domain-containing-protein	gnl\|CDD\|179823	PRK04323, PRK04323, hypothetical protein; Provisional.	8.81335e-49
NZ_AP018255.1\|WP_096694341.1\|7008923_7009472_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.33492e-14
NZ_AP018255.1\|WP_096690271.1\|7010224_7011049_+\|hypothetical-protein	gnl\|CDD\|273383	TIGR00995, Tic22-like_protein, chloroplast protein import component, Tic22 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic22 protein. [Transport and binding proteins, Amino acids, peptides and amines].	8.45142e-19
NZ_AP018255.1\|WP_096690259.1\|6995403_6996372_+\|solanesyl-diphosphate-synthase	gnl\|CDD\|131796	TIGR02749, Prenyl_transferase, solanesyl diphosphate synthase. Members of this family all are from cyanobacteria or plastid-containing eukaryotes. A member from Arabidopsis (where both plastoquinone and ubiquinone contain the C(45) prenyl moiety) was characterized by heterologous expression as a solanesyl diphosphate synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	2.28005e-175

>NZ_AP018255.1|WP_096690267.1|7004679_7005174_-|Photosystem-I-reaction-center-subunit-III
MQRLFGLLLALCLWFSFTPPTLALGADLVPCSQSPAFQARAEAARNTTADPNSGAKRFERYSQALCGPEGLPHLLVDGRLDHAGDFIIPGILFLYIAGWIGWVGRAYLNAVHKLPNPEMKEVVIDVPLALPIMLSGFTWPLAAIKELTSGELTAKDTEIPISPR
>NZ_AP018255.1|WP_096690266.1|7004430_7004565_-|Photosystem-I-reaction-center-subunit-IX
MQNGLLRYLSLAPVTLFAILIAQAVLLIVFNLIFPDLLFHPLPQ
>NZ_AP018255.1|WP_096690265.1|7003575_7004094_-|photosystem-I-reaction-center-protein-subunit-XI
MAQAVDASKNNPGDPRNREVVFPAERDPMQGNLDTPINASSLSKWYINNLPAYRPGLTPFRRGLEVGMAHGYFIFGPFAKLGPLRNTPNANLAGLLAAIGLIVISTGAIALYANSNPKPALGSVTVPNPPDAFTSKEGWNNYGSAFLIGGIGGAVVAYFLTSNLGVLQSITG
>NZ_AP018255.1|WP_096690264.1|7002881_7003499_+|guanylate-kinase
MMQVLSIQNSATTFSKLSQGKLIVLTGPSGVGKGTLMRTLLARHPELYYSVSATTRAPRPGEIDGKHYHFIERSKFEQLVAHGEFLEWAEFAGNYYGTPRQAVLNQINSGKCVVLEIELEGARQIRTSFPDAKSIFILPPSLTELENRIRGRGQDPEDAITRRLRRAYEEIKAADEFDIQIVNDDFETALQSIEVALDNFVTCKE
>NZ_AP018255.1|WP_019492432.1|7002418_7002685_+|DUF370-domain-containing-protein
MDIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDRGQLVDATYGRRTRAVIITDSSHVILSAIQPETVANRFVISREHQVVDN
>NZ_AP018255.1|WP_096690263.1|6999598_7001920_+|DUF3488-domain-containing-protein
MFTRIQKGTFLPEWINRYSNQTASAIEVENSIALRVLVLALVIVGIIATDIAAETQLSFWAAPLSIFGAAWSYKRRRNSNVSVKFGIAILMLVALGAFFGRILGELNDTRLVLAQLLVQLQVLHSFDMPRRKDLGYSIVIGMILLGVAATLSQTLAFAPMLLLFLAIALPTLIFDYRSRLGITKPIFGRDKTKQKNVTFASSLPSYFLLFGLILVIGLGIFALAPRFPGYQLRMFPVSSNIEVKGNFTGRSIINPGYVRAGNASGAASPGSSNDSSENGEPGKVDSSSYYGFNSRMNQNLRGEMKPKVVMRVRSQIEGFWRVLAFDRYTGKGWEISRNDKVQTIRRSPWSYQIYLPRPNALGTTKEIVQTYTVLADLPNLVPAMAHPKEIYFPTPVIAVDTENSLRAPVGLSDGLTYTVISEVPLRDRTLLGKAGNDYPELISKYYLQVPDAIKEKVRTRTEEILANYNNNRVGKSDKSLDSAYEKALYLAQYLKQNYKVPENPDEFPHLEANEDLVEAFLFKYKGGYPDHFSTVLTMMLRSVGIPARLVAGFAPGQFNPFTGLYIVRNTDAYAMTEVYFPKYGWFAFDPIPQHPLIPPSIEETQTFSVLQQFWKWIAGWLPSPVSGLLNNLFGAVFSFLARTFVWFFALFTKGFFGIIQGLVIATSSAFGIWLLWQQWRGFRIATALNKLPPMESLYQQMLQWVASNGFKKHPAQTPLEYAQVSKTQQPAATIEVIDEICSSYVSWRYGGQEPNLELLREKFNKLKKATKRF
>NZ_AP018255.1|WP_096690262.1|6998397_6999372_+|PatU
MNSDSESLQNQLFKWLIAKYATESENTSVDCKENNGVENIPSAANSSNDLQHQESMPHTSQLGEIPTVQERFQAVLKRRLQIQIQNHPPLFPWESQIQEYPDYVDNPSVALVPTWGWYAGASLSLPIDLPERIFRQLLARCQELVASSLPLGTKLVQAVENLFPGDEQAINDLAGLVLRTPYRSASAVEAMPNLDGDYFDLQTRQQMAVSLMAAKQLFDNLTLPVSATNPVVERQWSTDVGVIKLRVSYLQYGAEAKLCVQADLPTQGNIKVGNAATTAMAQSSSPGLLSVEILGVSPRQPYTLEVKLTEIDQQPLTFLILPTM
>NZ_AP018255.1|WP_096690261.1|6997214_6998405_+|heterocyst-differentiation-protein-HetZ
MNLAATTTIQGENSIGVEAIFELSFQELRQSTKASERNCHDVAMRITAEVYRICNESKRIQASGSIENSATTLARHRLTQCLRYYQLGSSRGRVELHSTLSAIVYRYINPPQRQLSYQGRLTIIEDFLQSFYLEALNAFRRENQLLATYQPQTLLELAEYMAFTERYGKRRIPLPGRQQQLIILRAQTFSQQQPPETCVDIEQAAEGSAGESDGSWEEPAVQMLRSAMATQPEPEPSEDTLRSVVITELMNYLEERQQTDCADYFALRLQDMSATEIESVLNLTSRQRDYLQQRFKYHLIRFALLHRWELVHEWLEADLSTNLGLTPIQWEKFIEEMDPKQRSILELKQQKEPDEKIAKSAGLSMAQLQKRWFKILEQAWEIRNSLMSGSSASTHE
>NZ_AP018255.1|WP_096690260.1|6996531_6997002_-|hypothetical-protein
MDLQAQIQLLIDNAPQDGITPQLITAIAPALQTVAQRLTHKQYYVLQGMDEQWVLTTLSNRTNPELEKRVVYAYPTLQDAFYSELRSSYSQLTAKPIGVIHVLFQLTAMEPVDSIVFFETSGVSGDTIEIPRFELQSLIQQVMTNYRNRVVPPDIA
>NZ_AP018255.1|WP_096690259.1|6995403_6996372_+|solanesyl-diphosphate-synthase
MTPATSLFTPVEADLRLLADNLIQLVGTDHPILYAAAKHLFGAGGKRIRPAIVLLISRATMLSDITTRHRRLAEITEMIHTASLVHDDVVDESESRRGVPTIHSLFGNRVAVLAGDFFFAQSSWHLANLDNLEVVKLLSQVLMDFAVGEIQQGLNRFDASITIDTYLQKNYYKTATLFANSAKAAGVLSEVNAETLEHLYCYGRDIGLAFQIVDDILDFTSSAEMLGKPVGSDLKSGTLTAPVLYALEEKPALYMLIEREFAQEGDLEQALALISDSQGIARARELAALCAKSAVEHLEDLPYSESRQALINMTDFALSRLY
>NZ_AP018255.1|WP_096690268.1|7005663_7006701_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MVTVLAIETSCDETAVAIVSGREVKSSIISSQISVHQQYGGVVPEVASRAHLEIINGIITQALEDAQLSWEQIDGIAATCAPGLVGALLVGMTAGKTLSMLYEKPFLGVHHLEGHIYATYLSEPTLKPPFLSLLVSGGHTSLIHVKQCGAYETLGETRDDAAGEAFDKVARLLKLGYPGGPAIDRIASLGNPKAFVFPEGRVSLPNGGYHPYDASFSGLKTAVLRLVQEIEKTGAPIPVEDIAASFQATVARALTKRAVKCALDHELDTIAVGGGVAANSALRKTLSDACAENNLRVLFPPLKYCTDNAAMIGCAASEHLALNHTSPLSLGVQSRLALTEVMKLY
>NZ_AP018255.1|WP_096690269.1|7006835_7007765_-|alpha/beta-hydrolase
MATIEIRSVPHAYEISKPTSCPDTVVFIHGWLNSRGYWQPVISRTKVDFQCLSYDLRGFGESQAKTQSRNARYDVVSSPFPSNYVSDYSSETTNHEDSLYTPAAYAQDLVTLLQKLQIKSAWLVGHSLGGTIALWAAAKLPDTIKGVICINAGGGIYLKEAFEQFRSVGQKFLQLRPRWLSQVPLVDVLFSRASVVRPLDRYWARQRVIDFVVADPEAALGALLESTTEEEVNRLPQLVAQLVQPVYFLAGAEDKVMEPKYVRHLASFHSSFQYSGDNVIEIPECGHLAMLEQPDAVANEIRRLVAQHS
>NZ_AP018255.1|WP_096690270.1|7007913_7008633_-|hypothetical-protein
MATGLKTSTLELLKRFNRAFPQFYEQFVSSEIQLQNLRLAYRLYKTRRAVIELKPEGSKSALHFAYRNQSFLLSDIFGVLAAYGLTIHSLSLYGQIKPPMLVFMKLIVSRASKSLTDKTAENVCRAVREALGGRFEVEEMLAVEFNLDAGLEQVQTEFYVDPVFHLPALVIEADNQPGLFYKVMYAIWQEDLLVVNANLLVWRGRTRLILYLLGPNESLIPEYLGHKIAEGVRTRLLGK
>NZ_AP018255.1|WP_096694341.1|7008923_7009472_+|GNAT-family-N-acetyltransferase
MGFWKTWFSTSETATTRTTPFEEQIVDATGKSIPNGATDASYKDTRIVFSTERDIDLYELEELCDAVGWSRRPLRKVKKAIEHSFLVASMWQVRGQQRRLIGFARATSDHAFNATIWDVVVHPDYQGRGLGKALMKYVLKKLRSEEISNVTLFADPHVVDFYRGLGFMPDPEGIKGMFWYPQ
>NZ_AP018255.1|WP_096690271.1|7010224_7011049_+|hypothetical-protein
MKSLVRWGTTLGLVGSTVLTTVFSGIIPAFALSEQQIKEKLDAVPVWMITNPQGLPLSRQLPAANDGKKKAGSVTGVYLSKAEAQAFIKELQGVKNPDPKMAEMLKTLQATAVPLGSIYQQLQQTKNQTERLQFAFKPVEQELKGAVDLLRASGQDVKQFPSVPVFMVRFAPDKGYVPIQLGSDKKEYFPLFMSKQDALALLNQVKSKFPKADIQVVDVDGVLKTMQDKNDKWLEQVVFFPSPEAREYIRTLSSNNPQQKPNQQPANRPAAPKK
>NZ_AP018255.1|WP_096690272.1|7011184_7012090_+|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MSNSQFPYLISGSQLWQWRSKAIAGAIQNNVEVGEVDWLLRGITELDGLALRLGSYKDQAQIKIKLTREDLDALWRQRLLERLPVQYIASSTPWRQFELSVSPAVLIPRPETEYLIDLAIATTNNSSLREGNWADLGTGSGAVAIGLASAFKQATIHAVDISPEALKIASNNACNLGYKERIKFYQGYWWEPLALLKGKFSGMVSNPPYIPTSTVLTLEPEVVNHEPHLALDGGTDGLDCIRQLINTSPEYLQPGGVWLIEMMAGQADTVVQLLQNHGSYRNIEIHTDFAGIERFAVAYKI
>NZ_AP018255.1|WP_096690273.1|7012256_7012850_+|L-threonylcarbamoyladenylate-synthase
MPQVSEGALIEGARKGLLVSFPTDTVPALAAKPENADLIYAAKQRSLDKPLILMAATASELWNYVDGNESELKIWQEVAAKYLPGALTMVLPTGASVAKTMNPTDPTTIGVRVPKLEIARSILAQTGPLATTSANLSGQSALLTMTEIAAQFPQVLVLQDEESQDTTSAIGVPSTVVKWTGNNWRILRQGALNFDLS
>NZ_AP018255.1|WP_096690274.1|7012987_7013932_+|HAMP-domain-containing-histidine-kinase
MDWNNWIYLAVGLLIGAGFRSLFTTSKNSTQVLNKSYQDEINELLLQIKQLNLAYNLAAEMSQFKAGFLARTTHVLRSPLNGLIGLHQLILSDLCESPEEEREFIAQAHERALKLLKLIDEILNVARVQRGTNSINIQRLPLNELLQEVNDQMYMLAENRNYPFKIVLPSEIYVLTDAKWLRQVLIILIETTIAQMEAQMEEGSISISQGGADTSNYTYIWLDIPAYAFMSSEAIDLSQAIMKMDTEVQQNPREPEKPVSPGMKLLLATTILEVLGGKLEVVPYPDNTQSQLTTRLQISIPLAPLETAQTMAAI
>NZ_AP018255.1|WP_096690275.1|7013882_7014350_-|GNAT-family-N-acetyltransferase
MSNAHIQFSDRKSDIDLNQLRDLFEIAAFWASERSTEDLSIAVANSEPVVTVKDGDRLIGFARATSDGIYRATIWDVVIHPDYRSQGLGSKLVETVLSHPKMNRVERTYLMTTHRQGFYEKIGFEKNSSTTMVIYNQSHFKSLPSSVQFQEVLGG
>NZ_AP018255.1|WP_096690276.1|7014507_7014888_-|hypothetical-protein
MENLEKDPIFNAQVQKLHRLTVYGRWLFVAVLWILIAPISLWNLRGEIALWRQYFTWVAVRYGLYFHPLATLGLALCIGMTASVLVWQSRNILFGLPKRDRELLEKRVFLIREQGATHPLWKWICR

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Crispr_ID: NZ_AP018255_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_28

7117837-7117932

Orphan

A:N

Consensus_repeat	Method
TGGTTAATTTTCCGCTTAGGATATATTTGTATCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_28

>merge|NZ_AP018255|28|7117837-7117932|CRISPRCasFinder
TGGTTAATTTTCCGCTTAGGATATATTTGTATCTGACTTATCCTCGCTTGAATTACGCGCCTTGGTTAATTTTCCGCTTAGGATATATTTATATCT

>NZ_AP018255|28|27|7117837-7117932|CRISPRCasFinder
TGGTTAATTTTCCGCTTAGGATATATTTGTATCT	GACTTATCCTCGCTTGAATTACGCGCCT
TGGTTAATTTTCCGCTTAGGATATATTTATATCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096690353.1\|7107998_7109879_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_AP018255.1\|WP_096690357.1\|7112544_7113519_-\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|133424
NZ_AP018255.1\|WP_096690352.1\|7107150_7107792_-\|DUF3318-domain-containing-protein	unknown	unknown	gnl\|CDD\|378716
NZ_AP018255.1\|WP_096690354.1\|7110896_7111076_+\|replication-restart-DNA-helicase-PriA	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694352.1\|7116675_7117239_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_AP018255.1\|WP_096690365.1\|7123286_7124372_+\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|259986
NZ_AP018255.1\|WP_096690358.1\|7113600_7114275_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|274056
NZ_AP018255.1\|WP_096690355.1\|7111258_7111750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690362.1\|7119131_7120754_-\|DUF655-domain-containing-protein	unknown	unknown	gnl\|CDD\|197270
NZ_AP018255.1\|WP_096690364.1\|7121880_7122816_-\|heme-A-synthase	unknown	unknown	gnl\|CDD\|224528
NZ_AP018255.1\|WP_096690369.1\|7133143_7135435_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173787
NZ_AP018255.1\|WP_096690370.1\|7135644_7136076_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379408
NZ_AP018255.1\|WP_096690367.1\|7126294_7126918_+\|heme-copper-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|224758
NZ_AP018255.1\|WP_096690363.1\|7120871_7121828_-\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|235293
NZ_AP018255.1\|WP_096690360.1\|7115433_7116624_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_AP018255.1\|WP_096690366.1\|7124460_7126203_+\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|213748
NZ_AP018255.1\|WP_096690368.1\|7132100_7132526_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018255.1\|WP_096690361.1\|7118039_7118669_-\|restriction-endonuclease-subunit-R	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690356.1\|7111788_7112328_+\|translation-initiation-factor	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690359.1\|7114425_7115211_-\|DUF4058-family-protein	unknown	unknown	gnl\|CDD\|379094

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096690353.1\|7107998_7109879_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_AP018255.1\|WP_096690352.1\|7107150_7107792_-\|DUF3318-domain-containing-protein	gnl\|CDD\|378716	pfam11780, DUF3318, Protein of unknown function (DUF3318). This is a bacterial family of uncharacterized proteins.	4.85963e-48
NZ_AP018255.1\|WP_096690359.1\|7114425_7115211_-\|DUF4058-family-protein	gnl\|CDD\|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	1.26751e-138
NZ_AP018255.1\|WP_096694352.1\|7116675_7117239_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.25449e-22
NZ_AP018255.1\|WP_096690369.1\|7133143_7135435_+\|S8-family-serine-peptidase	gnl\|CDD\|173787	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	3.14209e-23
NZ_AP018255.1\|WP_096690358.1\|7113600_7114275_-\|HAD-family-hydrolase	gnl\|CDD\|274056	TIGR02252, Rhythmically_expressed_gene_2_protein, REG-2-like, HAD superfamily (subfamily IA) hydrolase. This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.	4.9516e-85
NZ_AP018255.1\|WP_096690365.1\|7123286_7124372_+\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|259986	cd13919, CuRO_HCO_II_like_5, Uncharacterized subfamily with similarity to Heme-copper oxidase subunit II cupredoxin domain. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is diverse in terms of electron donors, subunit composition, and heme types. The number of subunits varies from two to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian cytochrome c oxidase (CcO) are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. It has been proposed that archaea acquired heme-copper oxidases through gene transfer from gram-positive bacteria. Subunit II is found in CcO, ubiquinol oxidase, and the ba3-like oxidases, while the cbb3 oxidases contain alternative additional subunits. Additionally, nitrous oxide reductase contains the globular portion of subunit II as a domain within its structure. In some families, subunit II contains a copper-copper binuclear center that is involved in the transfer of electrons from the substrate to the binuclear center (active site) in subunit I.	4.49863e-50
NZ_AP018255.1\|WP_096690364.1\|7121880_7122816_-\|heme-A-synthase	gnl\|CDD\|224528	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones].	1.62734e-56
NZ_AP018255.1\|WP_096690370.1\|7135644_7136076_-\|hypothetical-protein	gnl\|CDD\|379408	pfam13975, gag-asp_proteas, gag-polyprotein putative aspartyl protease. This family of putative aspartyl proteases is found pre-dominantly in retroviral proteins.	1.34062e-20
NZ_AP018255.1\|WP_096690363.1\|7120871_7121828_-\|protoheme-IX-farnesyltransferase	gnl\|CDD\|235293	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional.	2.09703e-141
NZ_AP018255.1\|WP_096690360.1\|7115433_7116624_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	1.57699e-136
NZ_AP018255.1\|WP_096690366.1\|7124460_7126203_+\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|213748	TIGR02891, Probable_cytochrome_c_oxidase_subunit_1-beta, cytochrome c oxidase, subunit I. This large family represents subunit I's (CtaD, CoxA, CaaA) of cytochrome c oxidases of bacterial origin. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits I-III form the functional core of the enzyme complex. Subunit I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit II and heme a of subunit I to the bimetallic center formed by heme a3 and copper B. This cytochrome c oxidase shows proton pump activity across the membrane in addition to the electron transfer. In the bacilli an apparent split (paralogism) has created a sister clade (TIGR02882) encoding subunits (QoxA) of the aa3-type quinone oxidase complex which reacts directly with quinones, bypassing the interaction with soluble cytochrome c. This model attempts to exclude these sequences, placing them between the trusted and noise cutoffs. These families, as well as archaeal and eukaryotic cytochrome c subunit I's are included within the superfamily model, pfam00115. [Energy metabolism, Electron transport].	0
NZ_AP018255.1\|WP_096690368.1\|7132100_7132526_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.97151e-10
NZ_AP018255.1\|WP_096690357.1\|7112544_7113519_-\|malate-dehydrogenase	gnl\|CDD\|133424	cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	4.51462e-165
NZ_AP018255.1\|WP_096690367.1\|7126294_7126918_+\|heme-copper-oxidase-subunit-III	gnl\|CDD\|224758	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].	7.32092e-68
NZ_AP018255.1\|WP_096690362.1\|7119131_7120754_-\|DUF655-domain-containing-protein	gnl\|CDD\|197270	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium. Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins, which show high sequence homology to the endonuclease from Salmonella typhimurium and vertebrate phospholipase D6. Nuc and PLD6 belong to the phospholipase D (PLD) superfamily. They contain a short conserved sequence motif, the HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), which characterizes the PLD superfamily and is essential for catalysis. Nuc and PLD6 utilize a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit. However, proteins in this subfamily have two HKD motifs in a single polypeptide chain.	1.26877e-49

>NZ_AP018255.1|WP_096694352.1|7116675_7117239_-|GNAT-family-N-acetyltransferase
MLLKTDEISIRLMQDNLHDYELMAKWLTDQKVLEFYEGRDNSFPLERIIEDYQSIVCGEEAEVACFFYYHNQPIGYLQYCALDQLTQADRETYNLEETNGVYAIDLFIGETQYWNQGIGSKVISKVVNYLFDELGARRIVVDPETWNTRAIHCYSKCGFVKVKLLPKHELHEGEYRDCWLMAIDRDK
>NZ_AP018255.1|WP_096690360.1|7115433_7116624_-|NAD(P)/FAD-dependent-oxidoreductase
MSQQSARICILGGGFGGLYTALRLSQLPWDNSQKPEIILVDQSDRFLFSPLLYELLTGELQTWEIAPPFAELLQNTGVRFCQAAVAGINVDSKSVHLHDGPEIKCDRLVLALGGETPLDMVQGATSYAYPFRSVSDAYRLEERLRILEESDKDKIRIAIIGAGYSGVELACKLSDRLQARGRFRLVEVSDQILRTSPEFNREAAQKALEKHGVFLDLDTKVESINQDSISLEYKNQVDTIPVDLVIWTVGTRVAPVVRSLPLKQNQRGQIIVESTLQAPDYPDIFALGDLAECHDALGQRVPGTAQSALQQADYTAWNIWASLTNRPLLPFRYQPLGEMMTLGVNNATLTGLGIKLSGPLATIARRAAYLYRMPTLDHQLKVGFNWLARPIIEVLS
>NZ_AP018255.1|WP_096690359.1|7114425_7115211_-|DUF4058-family-protein
MPSPFPGMNPYLENPALWSEFHNLLISSISQKLNPILRPKYRVAIEQRVYQTTDGDSLLVGVADVAVQKHQTANNQETENIAVASPPATALTVTIPMPETVKETYLEVRDVATREVVTVIEVLSPKNKRAGDGRQAYNKKRLRVLGSLSNLVEIDLLRNGKPMAILQNDIQSNYRILVSRSDFRPKADLYAFNLQNPIPSFLLPLRDTSEEPIFDLQTILHDVYDRASYDLVIDYTNDPVPALSDTDQHWFDMLLQENALR
>NZ_AP018255.1|WP_096690358.1|7113600_7114275_-|HAD-family-hydrolase
MPKPRVLFLDAVGTLFSVKGSVGEVYSQIAGEFGVHVSPSALNQAFYQSFKAAPEPTFPDAEVQDIPQHEFEWWQAVARQTFDLAGALQKFTDFDTFFSELYIHFGTESPWFVYPDVIPALKSWRQKGIELGIISNFDSRIFSVLQALELRDYFDSITISTQVGAAKPEAKIFGVALAKHNCPAEEAWHVGDSKNDDYYGAKAVGMRGVLITRASEQKVLVGAN
>NZ_AP018255.1|WP_096690357.1|7112544_7113519_-|malate-dehydrogenase
MLSESSFPILCHSPRVSIIGAGRVGSTLAQRIVEKNLADVVLLDIIPKMPQGIALDLMEARALENHTRRIIGTNDYADIFGSEIVVIAAGFPRKPGMSRDDLLQKNAEIVIEAATNAIAHSPQAIFIVVTNPLDVMTYLVWQAIGLSRDRIMGMAGVLDSARFETYIAMELGISPLDVSAMVLGSHGDSMLPLPRYSTVNGIPITELMNAETIERLVNRTCRGGAEIVDSIQTGGAFFAPASATCAMIETILRNHSRMLPVSALMQGEYGLNDLFVGVPCRLGCGGIEKVIELNLTDVELDSLRISATSVRQNIDKVKDVLKIK
>NZ_AP018255.1|WP_096690356.1|7111788_7112328_+|translation-initiation-factor
MVGDFFRKAKDFLASGVDSDQDEEREYRDNVRPASEDPYGDPADQYGRAGYGEYGDARPASEDPYGDPADQYGRAGYGQYGDVRPASEDPYGDPADQYGSAGYGQYGDVRPASEDPYGDPADQYGSAGYGQYGDVRPASEDPYGDPADQYGSAGYGQYGDIRRASEDPYGDPADEEGYR
>NZ_AP018255.1|WP_096690355.1|7111258_7111750_+|hypothetical-protein
MSKITTQNKRASLPIAVFLSALLAAPVLHGCGGGSRETSAPPVNDTVGRQVNDSTGANQPQKKQGLSTRNKVLITLAGAAAAYYIYNKYKNSKGTGEKGQYYISKNGRVYYRDAQGRPVWVTPPSQGIQVPAEEAQRYRDFQGYDGRTTGRDLRELAPQGAAF
>NZ_AP018255.1|WP_096690354.1|7110896_7111076_+|replication-restart-DNA-helicase-PriA
MQIIQKVRCPNCGCEGERHYISESQIQRTQCPACDYLMIMCTRTGRVIEAYAPGIPLHK
>NZ_AP018255.1|WP_096690353.1|7107998_7109879_+|excinuclease-ABC-subunit-UvrC
MTVSGKVLPLVKDPERLENRLKEIPPQPGVYFMRDASDRIMYIGKSRKLRSRVRSYFRDSQRLTERIATMVKQVTDIEFIVTDTETEALALEANLIKQHLPYFNVLLKDDKKYPYVCITWSEDYPRIFITRKRQLGKGKDKFYGPYTDSRLLREILRICKRIFPLRQRPQPLFKDRPCLNYDLGRCPGVCQKLETPEEYRKTVQKVAMVFQGRGQELVDILTEAMCKQAEALNFESAARYRDQINGLKSLTADQKVSLPDDTVSRDAIALAKDDNHACIQLFQIRAGQLVGRLAFVADASAEPGAILERVLEEHYQTADDVEIPSEIIVQHELPDSDILAAALGQRRGRKVTIVAPQRQLKAELLEMVERNAQYELERMQKLGDRNSEAMQDLAAIVDLPDLPHRIEGYDISHIQGSNAVASQVVFIDGLPAKQHYRHYKIKNPTVTAGHSDDFASLAEVIQRRFRKFIEDPQLQRLGNPDFPDLVMIDGGKGQLSAVVAVLEEMNLMEDVRVISLAKKREEIFLPGASLPVETDSEQPGVQLLRRLRDEAHRFAVTFHRQQRSDKLKRSRLDEIPGLGSHRQKQLLAHFRSVDYIRLATPAQLGEVSGIGPRLAQEIYDYFHPSN
>NZ_AP018255.1|WP_096690352.1|7107150_7107792_-|DUF3318-domain-containing-protein
MASYATSSAKAEMSELRRLKGLLPPELQSWVTVEGTTEVNPPLVRCEEIGKDQVEIQIDLVKWDSLAIDQRNLLFWHEVARVQNDTIPKDGWEMAALAIGLGGAVGELWVQDGLLLILALALCGVSGWRLYQKNSGEKIARELIEADEKAIGLAQRFGYTLPNAYKSLGSALKTLIDTTNSKRERSKYEARLSALKRSANKVRGKSRGADDDM
>NZ_AP018255.1|WP_096690361.1|7118039_7118669_-|restriction-endonuclease-subunit-R
MTQAKQAKDIDLRYLINIYGIQLVLDDQFFREWQDNLPETTDLDKQLLDKVKAGYFNLLNYPPLLESVVRIAIVDPILFIGDFFLTPFYIKAEEQIDITGEDEGIVIKGKIDTLVLKDQLWAMIIESKQAEFSIEKGLAQLLAYMLGNPYPDQPSFGMITTGGSFIFIKLVKGEVIQYGTSKIFEVRNPGNELYDVLRILKHLTQITTV
>NZ_AP018255.1|WP_096690362.1|7119131_7120754_-|DUF655-domain-containing-protein
MNLTFIKKYTFYSLILILTGCQNGCQQKATEQKTLLPLPQDPLIQVYLNHSQTSKYQEAYRNKERLGDDLEKQIVDTIKGAESQIDIAIQELRLPKIAQAIAEKHKAGVKVRLIIENTYNRPLSSLLPQEVKKLKPRESQKYKEYRSFIDINQDGKLDANEIEQRDALAILDKAKVTRRDDTSDNSRGSDLMHHKFVVVDNRFVIVTSANFTLSDVHGDYAKPDTLGNANNLLKIDSPEIATLFTEEFNLMWGASNNKKFGLKKPIRAPRTIKLGDSTVTIHFSPTSPTQPWINSSNGLIHTTLSTATKSVDMALFVFSDQRLANILEGRHQQKVSIRALIEKSFAYRSYSEALDMMGFALSDKCKYEVDNKPWRQPLTTVAIPSLPHGDLLHHKFGVIDNQTVITGSHNWSEAANTGNDETLLVIQNPVIAAHYTREFERLYQKSQPGLPQRIQQKIKQEQKQCPKIDLPSTIENKALQVNLNTATLAELEALPGIGKKTAQRIIDARQQKLFTSLKDLERVKGLSNSKLQKLQGYVSW
>NZ_AP018255.1|WP_096690363.1|7120871_7121828_-|protoheme-IX-farnesyltransferase
MIETNVSRHHQTFLQVVQSYYLLTKPRIIPLLLITTSGSMWIAAKGQVDPLLLLVTLAGGTLAAASAQTINCVYDRDIDYDMERTRHRPLPSGKVQSRDALIFAAVLAVLSFTLLSVFANVLAALLAMSGIVFYVLIYTHLLKRHSTQNIVIGGAAGAIPALVGWAAVTGTLSWAAWLIFGIVFVWTPPHFWALALMIRDDYAKVGIPMLPVVAGAKATVQQIWWYTLITVLASLLLIYPLHQTGFIYGAVAVVLGGIFIHKAWKLLQNPEDKPTAKGLFLYSISYMMVLCLGMVVDSLPITHNVVNFAVSKLHLLVG
>NZ_AP018255.1|WP_096690364.1|7121880_7122816_-|heme-A-synthase
MSEFVLEQQNIAAEPQPQERIRRLVWKISIATLILIAIGSATRVMNAGLACPDWPLCYGELVPAKQMNLQVFLEWFHRLDAALIGLSAIALVVLSWWKRRHLPGWLPIASTFALFLIIFQGVLGGLTVTQLLRFDIVTAHLGTALLFFITLLIIGTALTPYQGTGTAGKLPWVGLTAAISVYVQSLLGAVVGSRWALHQCFAGYQLCGVMYSHIFGLIPPTVAIVSLVVMAFRTPALHPALRKLASLAGGLLILQILLGVATFRLHLQVEPLTVLHSCVGATLLGTLVVFTVLGIRDTNTNKQTEQITPNY
>NZ_AP018255.1|WP_096690365.1|7123286_7124372_+|cytochrome-c-oxidase-subunit-II
MKIPSSIWTLLIGILLTLVSLWYGQNHGLLPTPASSEAFLIDGLFNTMMTVSVGIFVLVEGILIYSAFKYRRKAGDNTDGAPVHGNVPLEILWTAIPAIIVIGISVYSFEVYNDIGGFDPHAAHASSMSPEAMKMPGAAIAATLNDTPPTDQPNRNQEQSDKAMQDRATAAVRNADQIPQKNDAPGMGITSPRLGATPDQEGKAPDLVINVTGLQYAFIFTYPEAGVTSGELHVPIGREVELNMSANDVIHAFWVPEFRLKQDIIPGRQTEVRFTPQKVGDYPLICAELCGPYHGAMHTTVVVQSQQDYDNWIQEQLVASRETLNQAVAMNTNSKSVSDFLAPYTHQMGIEASEVLDQIHH
>NZ_AP018255.1|WP_096690366.1|7124460_7126203_+|cytochrome-c-oxidase-subunit-I
MTQAQIQEKANIPARIDEPGIRKWWEFFTFSTDHKVIGIQYIVTSFIFYCIGGVMADLVRTELRTPESDFVSPELYNSLFTLHATIMIFLWIVPVGAGFANYLIPLMIGAKDMAFPRLNAVAFWMIPIGGLLLVSSLAVGDAPDAGWTSYPPLSLVTGQVGEGIWIMSLLILGTSSILGAINFIVTLLKMRIPGMGFHQMPLFCWAMLATSALVLVSTPVLAAGLILLSFDLFAGTTFFNPTGGGDPVVYQHMFWFYSHPAVYIMILPFFGGISEIIPTHSRKPIFGYKAIAYSSLAISFLGLIVWAHHMFTSGIPGWLRMFFMITTMIIAVPTGIKIFSWLATMWGGKIRLNTPMLFAMGFVGTFVIGGISGVMLAAVPFDIHVHDTYFVVAHLHYVLFGGSVLGIFAGIYHWFPKMTGRMFNEFWGKVHFALTIIGLNMAFLPMHKLGLMGMNRRIAQYDPKFTTLNEICTYGAYLLAISTFPFIINMAWSWLYGKKAGNNPWQSLTLEWMTTSPPAIENFEGIPVLATGPYDYGLENAQYGVPMETDDPLTSASTNSVLRANPDEPYPSIAAKTDER
>NZ_AP018255.1|WP_096690367.1|7126294_7126918_+|heme-copper-oxidase-subunit-III
MQSQIVDPAKTELNHHHAATAEAHHEEHPDHRMFGLVFFLIAEGMIFMGLFGAYLAFRSVLPVFPPEGTPELELLLPGINTVNLIASSFVIHNADSAIKKNDVRGMQLWFGITALMGITFLFGQVYEYTHLEFGLTTNLFASAFYVLTGFHGLHVTIGVIAILAVLWRSRKPGHYSDQHHFGIEAAELYWHFVDVIWIILFGLLYIL
>NZ_AP018255.1|WP_096690368.1|7132100_7132526_+|GNAT-family-N-acetyltransferase
MSQKCTIIYEESPENAFTEVIQQGINKFNQLKAGNYNYKKLCLSLRDSEQKIVGGLVGETYWECFYIELFWINESYRKEGYGSIILQMAEDEARSRGVKQVYLNTFTFQAPDFYQNLGYRVFGELPNFPPGHKCYFLSKNL
>NZ_AP018255.1|WP_096690369.1|7133143_7135435_+|S8-family-serine-peptidase
MQNNDFNALGNGSVNGNGNGNGNGKSKVPSPENPNNMPSLSMGESRGTGEMISATMNADSYSAMQKVLVELRVSRTQGVLGVSENVGASIESFRLDTAYEPVPVAAPGNLVASLMAANEETYIIRGEVEERRIAELEAQPSVVKVYKDTPIAPFNPSVLEKTTYDLVKPMDGKGNCPVGTCDCSPTTPKGTIASVASYFGVDQIWAAGFRGQGIVVGVVDGGITAEGRPVDPFEGIRRIPNVIGGPAQDWGTKARSWGEHGNMCATDILGMAPEAKLYDCRIAGGDSISNALSVFQWAINQHRTDGTPHILSNSWGIYQKSWDEFYATNSDHPFTRKVVEAINEGIIILFAAGNCGGTCPADRCGGDSGSGKSIWGANGHPLVMTVGAVNKDEQFVGYSSQGPAALDPNKPDFCSVTHFRGYFGSDNGTSAACPIAAGVAALFTQAKPGMTQEEMKNLFKQTAKNIGEPGFDQNTGAGIIQPKVAFDKLNLQLPRWSEWESLGGNAFSAPAAVASGEKHLNIFAIGGDSAVYEKTWDGTTWSEWESLSGFAISAPTAISSAPLRINTFTIGQKRQVQRLSCSNTDWGACEWENLGGFCKHGIAASTWGTRQDVFTVGADNAVYQMTWNGNGWSNWTNLGGFALSAPTAVSWGENRIDLFIRSGDHAIYHKYWNGQVWSDWVSLGGLWLYAPSVTSWGANRLDVFAVGTDNAVYRKYSDGVTWSSWENIGGTAISAPASTSQGKNKLDVFIVGGNNAVYKKSLS
>NZ_AP018255.1|WP_096690370.1|7135644_7136076_-|hypothetical-protein
MEFAVAVLLAILIIHYPRKDGPARIKRRDGGCPIIDVTFNGAQEQEMLVDTGASKTSINKKMASDLNVEPVREGYFIMASGKVEKFPIGFVKSIEVGGAKVDNLEVAIIDSKEETGLLGQNFFGKYDVTIKRDEIEFNEPLDK

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Crispr_ID: NZ_AP018255_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_29

7229677-7229778

Orphan

A:N

Consensus_repeat	Method
GTAAACCCGCCCGTACAAAAGAGGCGCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_29

>merge|NZ_AP018255|29|7229677-7229778|CRISPRCasFinder
GTAAACCCGCCCGTACAAAAGAGGCGCGTCGGGGCGGGTTTACCAAAATTTCCGGTTATTTACCAGGATATAGGTAAACCTGCCCGTACAAAAGAGGCGCGT

>NZ_AP018255|29|28|7229677-7229778|CRISPRCasFinder
GTAAACCCGCCCGTACAAAAGAGGCGCGT	CGGGGCGGGTTTACCAAAATTTCCGGTTATTTACCAGGATATAG
GTAAACCTGCCCGTACAAAAGAGGCGCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096690441.1\|7222464_7222770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690444.1\|7225934_7227428_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235998
NZ_AP018255.1\|WP_096690442.1\|7222756_7223020_+\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl\|CDD\|226180
NZ_AP018255.1\|WP_096690455.1\|7238403_7239600_+\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|273374
NZ_AP018255.1\|WP_096690448.1\|7229807_7230326_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_AP018255.1\|WP_096690443.1\|7223290_7225648_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_AP018255.1\|WP_096690449.1\|7230759_7231386_+\|DUF3038-domain-containing-protein	unknown	unknown	gnl\|CDD\|371430
NZ_AP018255.1\|WP_096690446.1\|7228168_7228450_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690456.1\|7239718_7240669_+\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NZ_AP018255.1\|WP_096690447.1\|7228557_7229604_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_AP018255.1\|WP_096690440.1\|7220922_7221408_+\|allophycocyanin	unknown	unknown	gnl\|CDD\|381265
NZ_AP018255.1\|WP_096690453.1\|7236838_7237312_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_AP018255.1\|WP_096690451.1\|7232984_7235252_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|223815
NZ_AP018255.1\|WP_096690450.1\|7231390_7232893_+\|DUF4335-domain-containing-protein	unknown	unknown	gnl\|CDD\|372973
NZ_AP018255.1\|WP_096690457.1\|7240694_7241615_+\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|223654
NZ_AP018255.1\|WP_096690438.1\|7218419_7218914_-\|anti-sigma-regulatory-factor	unknown	unknown	gnl\|CDD\|225083
NZ_AP018255.1\|WP_096690439.1\|7219423_7220791_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_AP018255.1\|WP_096690452.1\|7235751_7236741_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_AP018255.1\|WP_096690445.1\|7227691_7227994_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|240845
NZ_AP018255.1\|WP_096690454.1\|7237349_7237937_-\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|224187

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096690456.1\|7239718_7240669_+\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	2.13062e-99
NZ_AP018255.1\|WP_096690444.1\|7225934_7227428_+\|amidophosphoribosyltransferase	gnl\|CDD\|235998	PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.	0
NZ_AP018255.1\|WP_096690442.1\|7222756_7223020_+\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	2.27728e-28
NZ_AP018255.1\|WP_096690455.1\|7238403_7239600_+\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	3.32659e-126
NZ_AP018255.1\|WP_096690448.1\|7229807_7230326_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	7.17818e-98
NZ_AP018255.1\|WP_096690443.1\|7223290_7225648_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_AP018255.1\|WP_096690449.1\|7230759_7231386_+\|DUF3038-domain-containing-protein	gnl\|CDD\|371430	pfam11237, DUF3038, Protein of unknown function (DUF3038). This family of proteins with unknown function appear to be restricted to Cyanobacteria.	3.93414e-91
NZ_AP018255.1\|WP_096690445.1\|7227691_7227994_-\|RNA-binding-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	2.12536e-31
NZ_AP018255.1\|WP_096690440.1\|7220922_7221408_+\|allophycocyanin	gnl\|CDD\|381265	cd12125, APC_alpha, Allophycocyanin alpha subunit of the phycobilisome core. Phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	2.42159e-98
NZ_AP018255.1\|WP_096690453.1\|7236838_7237312_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	5.2175e-55
NZ_AP018255.1\|WP_096690451.1\|7232984_7235252_-\|FHA-domain-containing-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	0
NZ_AP018255.1\|WP_096690450.1\|7231390_7232893_+\|DUF4335-domain-containing-protein	gnl\|CDD\|372973	pfam14233, DUF4335, Domain of unknown function (DUF4335). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 204 and 480 amino acids in length. There are two completely conserved residues (G and D) that may be functionally important.	1.77502e-77
NZ_AP018255.1\|WP_096690457.1\|7240694_7241615_+\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	7.14506e-88
NZ_AP018255.1\|WP_096690438.1\|7218419_7218914_-\|anti-sigma-regulatory-factor	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	7.15394e-32
NZ_AP018255.1\|WP_096690439.1\|7219423_7220791_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	8.34241e-164
NZ_AP018255.1\|WP_096690452.1\|7235751_7236741_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.50814e-06
NZ_AP018255.1\|WP_096690447.1\|7228557_7229604_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.12055e-116
NZ_AP018255.1\|WP_096690454.1\|7237349_7237937_-\|biotin-transporter-BioY	gnl\|CDD\|224187	COG1268, BioY, Uncharacterized conserved protein [General function prediction only].	6.03881e-30

>NZ_AP018255.1|WP_096690447.1|7228557_7229604_-|ABC-transporter-permease
MTASRASWESGKDSLIRFITSDTFIYIVKRVTQALFTLFFASALSFIIIQLAPGDYLDTLRQNPKISPERIAELKRQFGLDKSWFEQFFLWLQRILTRGDFGQSFVYQRSVSSLLWERVPATLYLAISSLIVTWAIAIPLGIFAAVKQNRAADRILQVVSYAGQGFPSFVTALLLLIFAQITAPLFPVGGMTSIYHDELNIFGKFIDIVWHMFLPTIALSVTSFAGLQRITRGELLDVLRQDYIQTARAKGLPENRVIYVHALRNAINPLITLLGFELASLLNGAFIAEFFFNWPGLGRLTLQALQAQDLYLLMASLVMGAVLLILGNLIADLMLKAADPRIKLEDLN
>NZ_AP018255.1|WP_096690446.1|7228168_7228450_-|hypothetical-protein
MSLDFYYIMRSKTDGKYLGARPYENESSYLLLFKEQYDALSYLNTHAEEYASRLGIEMIPNSQVPDILKRWGFIGVGIVSDPLIPNIEFLQRN
>NZ_AP018255.1|WP_096690445.1|7227691_7227994_-|RNA-binding-protein
MSIYVGNLSYQVTEESLNAVFKEYGTVKRIQLPTDRETGRLRGFGFVEMSSDEEEAAAIDALDGAEWMGRDLKVNKAKPREDNKGSFGGDRRGNFRNNRY
>NZ_AP018255.1|WP_096690444.1|7225934_7227428_+|amidophosphoribosyltransferase
MIPNHPLTSDCDQSTSEDSNYHERPDKPEEACGVFGIYAPDEDVAKLTYFGLYALQHRGQESAGIATFEGDTVNLHKDMGLVSQVFNESILSELPGTIGVGHTRYSTTGSSRKVNAQPAVVDTRLGKLALAHNGNLVNTVKLRDELVRDNINLVTTTDSEMIAYAIAQEVGAGLDWLDGAIKAFHRCEGAFSLVVGTPVGIMGVRDPNGIRPLVIGTIGSHPVRYVLSSETCGLDIIGADYLRDVEPGEVVWITEAGLASYHWSKKPQRKLCVFEMIYFARPDSLMHNETLYSYRMRLGRRLATESPVDADIVFGVPDSGIPAAIGYSQESGVKYAEGLIKNRYVGRTFIQPTQAMRESGIKMKLNPLKDVLVGKRVIIIDDSIVRGTTSRKLVKALRDAGAIEVHMRISSPPVTHPCFYGIDTDTQDQLIAARLSVEEISKQLGVDSLAYLSWEGMLEETQEDTNSFCSACFTGNYPVAIPEQVKRTKLVLEKVTV
>NZ_AP018255.1|WP_096690443.1|7223290_7225648_+|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MTLSSQPPFSPQEIAAEGIKPEEYQSIVNRLGRHPNKAELGMFGVMWSEHCCYKNSRPLLKQFPTTGKRILVGPGENAGVVDIGNGLQLAFKIESHNHPSAVEPFQGAATGVGGILRDIFTMGARPIAVLNSLRFGSLDDSRTQRLFQGVVAGISHYGNSVGVPTVGGEVYFDPAYSGNPLVNVMALGLMETPSIVKSGASGIGNPVLYVGSTTGRDGMGGASFASAELSDESMDDRPAVQVGDPFLEKSLIEACLEAFKTGAVVAAQDMGAAGITCSTAEMAAKGGVGIEFDLDKIPVRETGMVAYEYLLSESQERMLFVAHKGREQELIDIFHRWGLHAVVAGTVIEEPIVKILFKGEIAALIPASALAENTPLYERELLTEPPEYARKAWEWTPDKLPDCSIDGIEVNGKKLSWNDVLLTLLDTPTIASKRWVYRQYDHQVQNNTVMLPGGADAAILRLRPLENNENLIQNQIQNQKSGVAATVDCNPRYVYLDPYEGAKAVVAEAARNLSCVGAEPLAVTDNLNFGSPEKPIGYWQLAQACRGLAEGCRELDTPVTGGNVSLYNETLDSQGNPQAIYPTPVVGMVGAISDLNKICGQAWLEAGDLIYLLGIQVKSQTELGASEYLATIHNTIAGKPPRIDFDLERRVQKVCREGIYQNWIRSAHDCAEGGLTVALAECCIASKRGATVELASNDIVNQRLDELLFGESGARIVVSVPPVLQQQWESYLNKNLTNYWQKLGKVGNFDTDLQVTTSDNHTLIRVTIEEISSNFLNAIERRLSI
>NZ_AP018255.1|WP_096690442.1|7222756_7223020_+|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MPTPRFLLYSQVLIIHQRQIERFGGSDGVRDEGLLESALAQPQTTFGGELLHPTIVEQAAAYLFHLSMNHPFIDGNKRTAFAVMLTF
>NZ_AP018255.1|WP_096690441.1|7222464_7222770_+|hypothetical-protein
MTADVFKQNTLLEAAYKHLNQLSYEKLQLAVALLSHLQVASEDELSKLLNIPGFAAALHKTENQELENSNSTQIADSEEVWEAYLEIEKQWEEVFYRLADS
>NZ_AP018255.1|WP_096690440.1|7220922_7221408_+|allophycocyanin
MTVVSQVILKADDELRYPSSGELKSIKDFLTTGTIRVRIVSTLSENEKKIVQEATKQLWRKRPDFISPGGNAYGQRERAQCIRDFGWYLRLVTYGVLAGDIGPIEKIGIIGAREMYNSLGVPLPGMVEAISSLKTASLDLLTAEDALVAAPYFDYIIQGMS
>NZ_AP018255.1|WP_096690439.1|7219423_7220791_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MTNWQQGELIELEITDLNDDGDGVGRAMGRVVFVPDTVPGDVITARLVFVKPKFGHAILKEILKPSIHRVRPSCIVADKCGGCQWQHIDYQYQLVAKRNQVVQALERIGGFVEPRVDEVLHSTELGYRNKATYPVGTNAKGNFVAGYYQKNSHQIVNINQCPIQDERLNPLLARVKRDIQLKGWQPYDEKLHTGLIRHIGLRIGRRTGEILITLVINHENIPGIATVAQEWLDSTPPVVGVMLNLNCERTNAIFGRETRLIAGRNFLREEFLSLEFQVRPDTFFQVYTETAEALVHQIKMELGLKGKETLLDAYCGIGTLTLPLATSVGQAIGIEVQQEAVEIARSNAERNGVDNVKFHAGTVEKLLPSMDVKPDIVVLDPPRKGCDKSVIDALLKFKPKRIVYVSCKVATLARDLKLLCQDGVYTLTRVTPADFFPQTAHVETAAYLVLSQLAR
>NZ_AP018255.1|WP_096690438.1|7218419_7218914_-|anti-sigma-regulatory-factor
MITISLRPVGRNWGTISFASTLYLCPILDLLLAEIPAKMQAELRLGLQEALVNAAKHGNNLDPSKKVIVRFSLIDNQYWWVISDQGGGFDVKSAPGNLNTDPFETSPDLSSDTDPTEYLPPDEAESGRGLCILHQIFDQVEWNRKGTELRLCKQMETRPRLLRK
>NZ_AP018255.1|WP_096690448.1|7229807_7230326_-|adenine-phosphoribosyltransferase
MDLKSLIRNIPDFPKPGIVFRDITTLLSDAKGLQYTIDLLKEKCIEANLTVDYVVGMESRGFIFGTPLAYVLGAGFIPVRKRGKLPSAVHSIEYQLEYGTDCLEIHQDAIQPGSRILIVDDLIATGGTAAATAKLLQLCGCNLVGFGFIIELQDLNGRASLPNVPIISLAQY
>NZ_AP018255.1|WP_096690449.1|7230759_7231386_+|DUF3038-domain-containing-protein
MNVSAITPYNNNSMPSSLPMILDTLPEPAIEGQDCPRRTRLQIDLILLAIEALELGGSEAILAFAEELDLKGIIKDRVNLWRMRSSNPMRRAHIRRPLTIMEAKALVVIACYIARRLTVSIRQLLMIYQQMSDKQIPLEQNLRLSNYLERFRAHFKSRMNPRRSSVLAITSDEKLDELAIDLLGKLLFCTGTAGMQRFWISLFDGEVN
>NZ_AP018255.1|WP_096690450.1|7231390_7232893_+|DUF4335-domain-containing-protein
MNIQRKYSLPNCTLLLEGLSDASKATHFQEMRPELSILVNAECYLSGLKQPLVGGREFFEGLVRVVSGYAQQFLSNVPNPLVQNQDTDIVQLHKIDNNRHKLIVISETVQAFDSINSDVKMPVEIELNTVQLFDLVEAVDQFFADSQTLPELTLALQSSRRSGGASEGVVKQVVPATVGLSSLAAAALAFSLIPTPQPRVVQPTAQKDSSSLTNTTPNVATPVGETATPVVTEAAVVPTPGLTATPTPTIDTLTGTPTPTPTVASTPGTPQDIEALLKTVPEITDPSQLRALNRQVYNQINPAWANRGALNEDVVFRVGVAADGAIIGYKPVNKNSNDAVSQTPLPNLLYNPATRSSATNEPIAQFRVVFRKQGALEVSPWLGYSKTPQVVGEKIKDPNQLKELNTKLYDTIRNSWGGTPTFNTDLKYRVAINQDGVIADYEPLNKGAFDFYRETPLPKIFNEIYGSNVAPPNTKQPLAHYEVIFKPSGQLEIQPWQGYQ
>NZ_AP018255.1|WP_096690451.1|7232984_7235252_-|FHA-domain-containing-protein
MTPQPPQKPQTVLGQLTQAVQTIQARVDFSKLALKPKARVPELWVQDAGASQAEVYPLLGDRYMLGRSSKSSDIVVRNPVVSQIHLSLSRDSSQRRPVFVIKDENSTNGIYRGKRRVSELELRHGDVLTLGPPELAASVRLQYVDPPPLIVKAATWTAYGVGACAGLVALTIGVEWFKFSVRPLPGATRSPIVITARDGITPLRETRTTAHVDLKQLDDFGPYLPNAVVASEDSRYYWHPGVDPLGVIRAIFINTRSGDVQQGASTVTQQVARSLFRDYVGTQDSVGRKFREAVVSLKLETFYSKNDILLTYLNRVFLGANTSGFEDASKFYFEKSAKELTLAEASMLVAILPAPNRFDYCGAGDRKFRTIEYRNRVLRRMLDMGKIKLEEYNRARRSPVEISPKVCEQQAKTIAPYFYDYVFSELETILGADLAREGNFIVETQLDPSIQTQAETALRNSVRTDGSTYGFSQGSLVTIDTSTGAILAMVGGTDYRRSQFNRAFQAKRQPGSTFKVFAYTAAIEKGISPEKSYSCDALRWQGFLYKPCRSGAGGSLSLATGLALSENPIALRVAQDVGLDNVVKEAKKMGVRSPLDPVPGLILGQSVVNVLEMTGAFGAIGNNGLWNRPHAISRILDSSDCRDRNDLKTCRVIYSYDQDLEANKRVLSKSVASTMTELLRGVITNGTGRGAAIGFGEAGKTGTTDKNVDLWFIGFIPGRRLATGIWLGNDEIKPTSGSSAQAAQLWGNYMGRIVK
>NZ_AP018255.1|WP_096690452.1|7235751_7236741_+|hypothetical-protein
MKGKFLTLVGTAFGLALSCNVAAAQSTKFPELMQAQAEKQSKPSTVESAAPKDLPPDVMEILCRNFPLNSRCQGGANANTTGGSGSGSSEKTPGITGSPTGGSTPVNPSTTPSTTEGGSSTPGTGSSAPSDTNPTGAPSPSGTVNPVEPGINTTPGSTTPGSTTPGSTQPSNESGTGSSAPSDTNPTGAPSPEGTVNPVEPGTNKPGTSGGSNQQIVPVTPLPGSSNETPGTLTPGNTTDTPSVPSSGTLRETAPLNTIPGAPGSTDGNSSGSTSEPLKTPTTETPSSTTEPLKTPTSGTPNNLTLPGNTSPEVTPGSGSQVAPSGVKN
>NZ_AP018255.1|WP_096690453.1|7236838_7237312_-|lipoprotein-signal-peptidase
MHLKNRNFWIAALTAFFLDQLTKYWILQTFQLQQTQPLIAGVFHFTYVRNYGAAFSILAGQVEWLRWLSLGVSVALMALALFGPELSFWDRLGYGFILGGAMGNGIDRFVLGYVVDFLDFRLINFPVFNLADVFINVGIACLLYGSFQKTPSSNPRQ
>NZ_AP018255.1|WP_096690454.1|7237349_7237937_-|biotin-transporter-BioY
MLAASNQLLWSMIGLLLTMGGTFVEAYVTTLPWGWGQHGIQTFSLGVTYQIGGVLLVGCLGGKNAGALAQIAYLVMGLTLLPVFSDGGGIGYIKLLQFGYLLGFIPGAWICGLIAFKARPRLETLAFSCLCGLFTVHLCGIIYLALGYILQWKGTEAQTLTQAILKYSWYALPGQLTVVCAVSVIAFILRHLMFY
>NZ_AP018255.1|WP_096690455.1|7238403_7239600_+|phosphate-ABC-transporter-substrate-binding-protein-PstS
MLCFNRVNIRKSITGVVPALALSLSLAACGGDQAANNTATPGAEASPGAVKDATASAPGKLDLGGNVALTGAGASFPAPLYLTWFQTLNQKYPNLQINYQSVGSGAGVEQFTKGTVDFSASDVAMKDEEIAKVPADKGVLLLPMTAGSIVLAYNLPDAPDLKLSRTVYTDILLGKIKTWNDPAIAKDNAGAKLPNTPITVVYRSDGSGTTGVFTKHLSAISPEWKNKVGEGKSVKWPVGIGGKGNEGVTAQVGQTAGSIGYVEYGYAKQNNLKFASLQNKAGQFVTPNEQSGAKTLESVTLPDNLRAFISDPEGADSYPIVTYTWLLAYKKYADPAKAKAIEAMIEYGLTEGQKAATELGYIPLPANVVQKVAAAADPISAEYKISVGGAGGSTATKP
>NZ_AP018255.1|WP_096690456.1|7239718_7240669_+|phosphate-ABC-transporter-permease-subunit-PstC
MSSLAQGSQASEKSRSEVDRNLDRGFIWTTKIFAIAIAAILIWISIQVALQAWPAIQKFGAGFLIQTDWNPVVNNYGVLPQVYGTLVSSFIGLLISVPLGVGAAILLSEDFLPANVRLVLVFMVELLAAIPSVVYGVWGLFVLVPLLTGIGKGLNATLGFIPLFSTTPTGPNMLVAGIILAIMTLPIITAISRDALNSVHPSLRQAALGLGATRWETILQVLVPAAFSGIVSAIMLALGRAMGETMAVTMLIGNSNTISPSLFSPANTISSLLANQFAEASGLQVGALMYAALVLFFLTLVVNILAEIIVMRVKRI
>NZ_AP018255.1|WP_096690457.1|7240694_7241615_+|phosphate-ABC-transporter-permease-PstA
MPSNLSDHSHDYTMGSLVRSPSAPRTLFNSIMTGIAFFCGAVAIFTLAAVLSYILFRGFGSISPRVFTELPPLPFGPSQGGFGNAILGTIIMVVIGALISIPVGVLAAIYLTEFSSGQLARWIRFATNILSGVPSIIAGVFAYGVVVLTLNKLGWGSYSAVGGGFALSILMLPIIVRTTDESLQLVSNDLRQAAVGIGATKFQTVASVVLPAAVPAIVTGATLAVARAAGETAPLLFTALFSSGWPSLTPQGLLQPTASLAVLVYNYAISPYEKWKSLAWAASLILVLMVLIASIIARFATRRKAY

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Crispr_ID: NZ_AP018255_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_30

7870357-7870445

Orphan

A:N

Consensus_repeat	Method
TATCCTCGCTTGAATAAGTGGCGCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_30

>merge|NZ_AP018255|30|7870357-7870445|CRISPRCasFinder
TATCCTCGCTTGAATAAGTGGCGCCCGTTGTTTTTCAAGCGAGGATATATTTGTCTCGAACATATCCTCGCTTGAATAAATGGCGCCCG

>NZ_AP018255|30|29|7870357-7870445|CRISPRCasFinder
TATCCTCGCTTGAATAAGTGGCGCCCG	TTGTTTTTCAAGCGAGGATATATTTGTCTCGAACA
TATCCTCGCTTGAATAAATGGCGCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096690965.1\|7872094_7873024_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223469
NZ_AP018255.1\|WP_096690964.1\|7870686_7872012_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690955.1\|7853609_7854257_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690958.1\|7857914_7860230_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_AP018255.1\|WP_096690961.1\|7868000_7868798_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|178201
NZ_AP018255.1\|WP_096690968.1\|7874533_7875784_-\|nickel-pincer-cofactor-biosynthesis-protein-LarC	unknown	unknown	gnl\|CDD\|235249
NZ_AP018255.1\|WP_096690967.1\|7873877_7874438_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690959.1\|7864630_7865599_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|275067
NZ_AP018255.1\|WP_096690969.1\|7875825_7876464_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|272879
NZ_AP018255.1\|WP_096694389.1\|7869196_7869409_-\|NAD(P)H-quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|313841
NZ_AP018255.1\|WP_096690962.1\|7868840_7869149_-\|DUF3007-family-protein	unknown	unknown	gnl\|CDD\|371542
NZ_AP018255.1\|WP_096690963.1\|7869902_7870244_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690971.1\|7878685_7878892_+\|DUF751-family-protein	unknown	unknown	gnl\|CDD\|368433
NZ_AP018255.1\|WP_096690956.1\|7854385_7856038_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375050
NZ_AP018255.1\|WP_096690966.1\|7873294_7873813_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690960.1\|7867082_7867730_-\|heterocyst-differentiation-related-protein	unknown	unknown	gnl\|CDD\|274342
NZ_AP018255.1\|WP_096690972.1\|7878932_7879319_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_AP018255.1\|WP_096690970.1\|7877072_7878275_+\|HetZ-related-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690973.1\|7880045_7880282_+\|DUF4327-family-protein	unknown	unknown	gnl\|CDD\|372966
NZ_AP018255.1\|WP_096690957.1\|7856196_7857816_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375050

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096690965.1\|7872094_7873024_-\|hypothetical-protein	gnl\|CDD\|223469	COG0392, COG0392, Predicted integral membrane protein [Function unknown].	1.2765e-05
NZ_AP018255.1\|WP_096690969.1\|7875825_7876464_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|272879	TIGR00057, Putative_threonylcarbamoyl-AMP_synthase, tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family. Has paralogs, but YrdC called a tRNA modification protein. Ref 2 authors say probably heteromultimeric complex. Paralogs may mean its does the final binding to the tRNA. [Protein synthesis, tRNA and rRNA base modification].	2.36153e-77
NZ_AP018255.1\|WP_096690958.1\|7857914_7860230_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	3.09505e-33
NZ_AP018255.1\|WP_096690961.1\|7868000_7868798_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|178201	PLN02591, PLN02591, tryptophan synthase.	4.27825e-123
NZ_AP018255.1\|WP_096690968.1\|7874533_7875784_-\|nickel-pincer-cofactor-biosynthesis-protein-LarC	gnl\|CDD\|235249	PRK04194, PRK04194, nickel pincer cofactor biosynthesis protein LarC.	0
NZ_AP018255.1\|WP_096690959.1\|7864630_7865599_-\|DUF11-domain-containing-protein	gnl\|CDD\|275067	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain. The Streptococcus Pneumoniae pilus backbone protein, RrgB, has three tandem domains with Lys-to-Asn isopeptide bonds, but these three regions are extremely divergent in sequence. This model represents the homology domain family of the D2 domain. It occurs just once in many surface proteins but up to twenty times in some pilin subunit proteins. Three of every four members have the typical Gram-positive C-terminal motif, LPXTG, although in many cases this motif may be involved in pilin subunit cross-linking rather than cell wall attachment. Proteins with this domain include fimbrial proteins with lectin-like adhesion functions, and the majority of characterized members are involved in surface adhesion to host structures.	1.12095e-06
NZ_AP018255.1\|WP_096694389.1\|7869196_7869409_-\|NAD(P)H-quinone-oxidoreductase	gnl\|CDD\|313841	pfam10716, NdhL, NADH dehydrogenase transmembrane subunit. The NdhL family is a component of the NDH-1L complex that is one of the proton-pumping NADH:ubiquinone oxidoreductases that catalyze the electron transfer from NADH to ubiquinone linked with proton translocation across the membrane. NDH-1L is essential for photoheterotrophic cell growth. NdhL appears to contain two transmembrane helices and it is necessary for the functioning of though not the correct assembly of the NDH-1 complex in Synechocystis 6803. The conservation between cyanobacteria and green plants suggests that chloroplast NDH-1 complexes contain related subunits.	1.45103e-19
NZ_AP018255.1\|WP_096690962.1\|7868840_7869149_-\|DUF3007-family-protein	gnl\|CDD\|371542	pfam11460, DUF3007, Protein of unknown function (DUF3007). This is a family of uncharacterized proteins found in bacteria and eukaryotes.	1.09314e-50
NZ_AP018255.1\|WP_096690971.1\|7878685_7878892_+\|DUF751-family-protein	gnl\|CDD\|368433	pfam05421, DUF751, Protein of unknown function (DUF751). This family contains several plant, cyanobacterial and algal proteins of unknown function. The family is exclusively found in phototrophic organisms and may therefore play a role in photosynthesis (personal obs:Moxon SJ).	5.41909e-21
NZ_AP018255.1\|WP_096690956.1\|7854385_7856038_-\|hypothetical-protein	gnl\|CDD\|375050	pfam17210, SdrD_B, SdrD B-like domain. This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.	3.52048e-22
NZ_AP018255.1\|WP_096690960.1\|7867082_7867730_-\|heterocyst-differentiation-related-protein	gnl\|CDD\|274342	TIGR02894, DNA_bind_RsfA, transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO. [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	0.000385768
NZ_AP018255.1\|WP_096690972.1\|7878932_7879319_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	4.8506e-51
NZ_AP018255.1\|WP_096690973.1\|7880045_7880282_+\|DUF4327-family-protein	gnl\|CDD\|372966	pfam14217, DUF4327, Domain of unknown function (DUF4327). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.	2.59769e-41
NZ_AP018255.1\|WP_096690957.1\|7856196_7857816_-\|hypothetical-protein	gnl\|CDD\|375050	pfam17210, SdrD_B, SdrD B-like domain. This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.	3.72804e-23

>NZ_AP018255.1|WP_096690963.1|7869902_7870244_-|hypothetical-protein
MIEKMHSGKLEDKFDINNISSLEKQWAPLIQARINIWKAINTIRDRIHSVSVKVVYIILSCKFHPRTWGRRDLNPHDRLRSTDFHPFVAFTTTDCESTEGFKDWTLPLPSTLR
>NZ_AP018255.1|WP_096694389.1|7869196_7869409_-|NAD(P)H-quinone-oxidoreductase
MIVPLLYLVLAGAYLLVLPLIIVYYMKLRWYSVSSFERAFMYFLVFLFLPGLLVLSPFLNFRPKKRQIPA
>NZ_AP018255.1|WP_096690962.1|7868840_7869149_-|DUF3007-family-protein
MRRIDAIIIILGVFLSGGLGYMIFQQVGFDSQSAGIWTQAILVVGLIGWLVTYLRRAVGNKMTYHEQRQKYEEAYFEKRLNELTPEELEKIQAEIEQEKKPK
>NZ_AP018255.1|WP_096690961.1|7868000_7868798_-|tryptophan-synthase-subunit-alpha
MTAISDCFKTLALSNSCALIPFITAGDPDLHTTAQALQVLDQNGASLIELGVPYSDPLADGPVIQAAATRALQKGTTLPSVLEMLEATTPLLLAPIILFTYYNPILNRGVDNFLKIVKSSGVAGLVIPDLPLEESATLLEAAAAMEIDVTLLIAPTSSKQRIEAIARASQGFIYLVSVTGVTGVRTQIETRVSDLITQIRAVTDKPIGVGFGISQPPQARQVKDWGASAVIVGSAYVKRLAEGTPQQGLQSIGEFTRSLKQAISA
>NZ_AP018255.1|WP_096690960.1|7867082_7867730_-|heterocyst-differentiation-related-protein
MSESMAFIGGVAVAGLAALVLLKGTGNPVQSGFVPPQIQAPIVPQQVIPQQFGQYGYPGQQGVIPNPVPNAPNDQQLRLESERIKMQVDTLQRDNERLKVENQQMNLQLQAFAQQRALQDQQNQQRNAIAQAQSPWWSSGILWAVGGMALTVGGGIVVAGVSSLFSQKPRPVRTVQVVHPYTGPTPPLAPTRRAEFLPPRNEVRRVETHEYDDTY
>NZ_AP018255.1|WP_096690959.1|7864630_7865599_-|DUF11-domain-containing-protein
MTSILSWLRRKHLFFPIFTFSIFTYGIIPGSAQTEVRTEIRNTARVGADNIPERPGGRVVDSNNVTVRASQAALEVIKTGSHASAEPGDTVAYNVVVRNSGTTTTAEKITITDRLPLGLLFIGKSLGVLYRGQTQALDPKSSSINSNAATVTIDLPENIQLRPNESLIVSYAVEVTPDAVRGTGRNLAQARNRNLTSNQASHTLRIRSGIVSDCGTLIGRVFVDKNFDGEQQRNEPGVPNAIIYMDDGNRIVTDANGLYSLANVVSGYRSATLDLTSLPGYALAPNNYFIERNSQSRMVRLAPGSMARVNFAVTPAFSEGKR
>NZ_AP018255.1|WP_096690958.1|7857914_7860230_-|OmpA-family-protein
MEKLKRYWSKRSRKKEKGKRITSLPTPTLLALSLSLVPSNVAFSQQSGSNTVPTPTPALRIIVNSNLDGNVQQDNQLTLREAIELANGTLQQSQLSPAEQALVTPSTSGGSRIEFNLPASGATTIQLQRILPDLASPNLVIDGTSQPGYDATKSATAEIAIPIPVVAVTPAPNIEIFRGLTVVADGITVRGLSLYGFNASPVKQQLGNLLIYDGVPKPVTLTTPPGDIVVAHRFPPPNTTRQQPPNSNFPFYNRDIPPKNVVIEDNWLGLTTDEKIPQETSAFGVYVFNSQGTTIRRNRIYYHDGSAIITSVRGENTLVTQNIIVGNGLAGMPDALRIEGVVTNSQITGNLICANDGAGVYLFKPDGNVLLQNNKITYNGRRLRRAAVYLMGSNHRVIGNEIDNQTGPGVSVTSFPRNDIGSSSTSSGNIIRGNRFAVLEGLSIDLITQQNLEVSDFQRGDGANPKRNSDNRRLDTGNGAVNAPQFATRAFPPGTSVTIQGKADPGSEVAIYKLSDYQRGKQAIYDYGYGALNVPLTTVTADAKGNFSTNITNVQQGDAISAIATDPKYGTSEPSVAAVIGQAGTFPNLTPTTRPSPIVPPQCTTRPVPPAPPPPPPPPPPPPPLKIRVPRNIHFALDKSFISPASAQVLDRVAEVLLQNPVIVIEIVGHTDPRASDAYNLALGRRRALSTRNYLLRRGVAPERMTIRSAGESQLLYPGSTDIVDYARDRRAEIIFKDIRGVDIIIEPQEDDLQIEQRRNQNPTQPVRRNR
>NZ_AP018255.1|WP_096690957.1|7856196_7857816_-|hypothetical-protein
MKHLFKGVLQAFNNVWISLLQHFGGLCSGQIFKFLRPKSLRYYLLALVLVVMQIVGNVNSKQKAVAQEQNFCPAGNVPTTVNWRPAVGAPNIATQTIPVGEVNVNFSFTESLPGRVIDNEETLISNDVYGGLPGPNLRFNIGQEKTPSPGSATLSINFSRPVIIASPLTLLDVDRNGVRDIGFTYQDRVTVNAFNGDVPVGVTLRSLTPNTRVTGNTVVGTIENSFPDRPDSNVSVTPGGQLNRIDFLYEPGTEFGQPLQDETVGLARFSICLPAPPGATIGDTVFNDRNGNGRQDQGEPGIGNVTLILRNSRGQEVRRTTTNSNGIYSFINLPLGNYTVEALRPNTDFNPTTNTTLAANLTQPNQELLTVDFGFNTNRLGSAGAPNISLIKRITSATRNGQLISGTNFNTFVADPNNNNDDALPSPERFRGVSTLEAPIQSRDEIEYTIYFLAEGDGTVNNVRFCDLVPNGTTFASNSINIDGAGSGADGGRYLSPLAPLEAFTNICPGSNNNGAVVANLGNIASGNFGSVRFRVTVN
>NZ_AP018255.1|WP_096690956.1|7854385_7856038_-|hypothetical-protein
MKSINVRVLKRVKAIFNKLIHLLLYITINNRRAPRIIKPLRYFFLTALMVVTQTAIFGTIPNQKVVAQTNGVCPAGTAPTIVNWQPAVGVEAISAQNINVGGVGVRLNFTESIPGQVIESELVDFQGQVYGTRIDNDVYGGLPGPNLRFHIGIGKQPAPVGSNATLTVNFDRPVTLASPLTVLDIDRDGARDVGFTYQDRVTVNAFNGSSPVNVTLQSLGRTTRVTGNVAVGINENAFPNSSDGNVSVTPVSQITSVRLIYEPGTEFGPPRQDETIGLARINICAPSNTGSIGDTVFNDRNANRIQDQGEPGIQGATLILRGANGQEISRTTTNSNGIYGFTGLPLGDYTVEAVRPNNDFRPTTNTTLAANLTQANPTRLDIDFGFRSTALGAAGTPNIQLLKRITGATRNGQTITGTNFSNFVPDPNNNNDDSLPAPERFRGVPQLEAPVQSGDEIEYTVYFLTEGDENITNVRFCDLVPSGTTFTNNSIGITGAGSGADGARFLTPLAPLDTFVNICPGSNNNGAVVANLGSIPGGQFGFVRFRVSIN
>NZ_AP018255.1|WP_096690955.1|7853609_7854257_-|hypothetical-protein
MRKTYKISLIACLITSTLGCSVLIGENIVQAQRSPRPVELLRSRCVSSGLGSAREENTDIAIGRAVYTSRFFLGPGSRSATLTCRIRPNSSKQPIFQTLNLGFGMRDSDSSSPNAEVRVYLDGRPAEARTVSTSQQNTLSLDVSNVSNVSIEAVCTSGNRYCDRVYFYEASLLRPATQTNVAPSPQSTQQFSVPGQTPVLPPPTTAPSPITPQKY
>NZ_AP018255.1|WP_096690964.1|7870686_7872012_+|hypothetical-protein
MNVNSLAHGQGNRHLPKSKDKRIKLQNIQEKMYSFLLRIVKSWQPEEVLRVFKRSFIDCLDSEASKSSLGLYIVFLEHPEQEFRNTIKRCCYILINNWESTRRIKYINQLVELIGNYKFHITPYTPSKIKIARTWLDNFIKSADYQELQLFAHRHDDQRGHWVNRYSSYLLFAQSLKEDNPKEQKEAARKLSKVLKEKYKFELAMYIARSQSQTNIPTSSITTRYRNPSTLGDDVLRLIKTIVLKKGVFSYDNIANIFIKQIQNQTFQEFKISLQKYLIFSVQQPEFVEILRQQLAEKLDLWKQEYRERIINKDFVLRTCNRVIDCLTIENGREPSSLFIMLLSQGHPLTLVIVLLKLVLVSRNSRSHLEMRIADLIQYYNKYPEDECKWVINFIEIFNITFAIYAENVEYNLIMMEQEKTMHQDQSNNLDAYRVFSQLKT
>NZ_AP018255.1|WP_096690965.1|7872094_7873024_-|hypothetical-protein
MFKRILRWLILGGTLFFLAKALKDNWYSVTAIRIDSVGWAILSIATGITLLAHTWAGLVWTWVLRELKAPVPTFNFIQVYLKTNIAKYLPGNVWHYWGRIVAAKDAQISTGVATLSVLLEPLLMAAAASIIIVLFGYEFIATDSIWLQIMQALGLIAVLCIFHPRLLNPVLSFLQKIKFKKAKNPEVLGDTVSLRLERYPLKLLLGELVFLLLRASGFILTVFALAPLQVDQIPILLSAFSLAWLLGLIVPGAPGGLGIFEATAIAILQSHFPSALVISAAALYRLVSIFAETVGAALAVADERFTINL
>NZ_AP018255.1|WP_096690966.1|7873294_7873813_+|hypothetical-protein
MKALFSSIKLVSLRKFVTVTLFAVLLIVTTACASVDTQAANPNSQPVQMGGANNPYKGGGDKFTRNEKGGSQASLKTDSQRIATRENELLYPGAETPAGRKQKEAEMPIITEKDIQPKPGGLIQREESVGERVKDRLETVKESVKDASSFLGEKADEASARPEVQKNPAVGK
>NZ_AP018255.1|WP_096690967.1|7873877_7874438_+|hypothetical-protein
MKSFRPLKALAVVILGMFLFFTSVGTSLAATLKPNAGEKSEYYAPKDTGAINDYEGGMNNFSDRDARAPGSIEEQAAALKRQAEENIKKSSSDLGRNARRVARDSDKLGENVKEKAGSVTEKLQDEAESFGKSTKKGLRNIKNNAQDAPGYAADQADKTIGNPIEGIKQAGKDETETVKRSVKEAK
>NZ_AP018255.1|WP_096690968.1|7874533_7875784_-|nickel-pincer-cofactor-biosynthesis-protein-LarC
MSKVVYLQCPTGISGDMCLGALVSLGVPLEYLIEKLNSLGIENEYTITAELVHRHSQEATKVHVNLVEHHHHHHGRHLPEIEAMILKAQLPARVTAWSLAVFRQLAVAEGAVHGVAPSSVHFHEVGAVDAIVDIVGTCLCLDWLGIDNNEAQLPLLYCSALPTGGGTVLAAHGVMAVPVPAVLKLWEARGVPVYSNGIEKELVTPTGAAIVTTLASKFGAPEAMTLTQVGLGAGNLNLPISNVLQAWLGYSDSQLNNTSNNSPYVETISVLETQIDDLNPQAIGYLYDELFRAGALDVFTQSIGMKKSRPGILLTVICYQDKIQQVQEILFRETTTLGIRVSTQQRSTLQRQIETVETEYGTVGVKIAWLGEATNKLVTNVQPEYEDCASLARKYNVPWREIQRQALQCWHQKNKR
>NZ_AP018255.1|WP_096690969.1|7875825_7876464_+|threonylcarbamoyl-AMP-synthase
MAKIFSIHPENPQTRGIEQIQAELRRGAVMLYPTDTVYAIGCDLNVKSAVERVRQIKQLANNKPLTFLCPSLSDVATYAFVSDNAYRTMKRLIPGPYTFLLPATKLVPKLVQNPKRKTTGIRVPNHNVCLALLSALGNPIISTSAHLRPDDDIDTDFEQGITQAELFDRLEDLVDVIVDTGEEPTANTSTILDLTGDEPVLVRQGLGIFLRT
>NZ_AP018255.1|WP_096690970.1|7877072_7878275_+|HetZ-related-protein
MNNLTNNTNNANQPAVEFSPVINNTLVDLLCQEFQPLLKASPNCVKAVSSRIAREVERICDKSSRIQTSGQVNSWLLTLAKHRIQKCLHYYQLGSQKGRVELHSSLGSMVYRHISAPNVQLGFDARYNLIEDFLQAFYIEAIKAFRRENELPEDYSPRTKLQLAEYMAFTEQYAKRRINLPGGCNQQLIILRAQGFSRRQPQETTVDFEAALEGSRTEESEAYQRNSTVQQLRAQLVSQGNFDPAEDSERNRVIQELITYLEAQGQKDCIDYLTLKLKDLSAPEIDNILGLTSRQRDYLQQRFKYHVEKFARTHNWQLVHQWLGAGIEQKLGLSSQQWDNFVNQLTPAQQQILQLKTELINDQVIAKTVKCTPKQLQKRWTQLLELAWTIRNGHTEAQAS
>NZ_AP018255.1|WP_096690971.1|7878685_7878892_+|DUF751-family-protein
MFDGFWENIARYPRYFITTLLGVLFNVGAPLAPLFKRPVTLIAVIGILISSFVFVSLTLRAMLGLSPI
>NZ_AP018255.1|WP_096690972.1|7878932_7879319_+|30S-ribosome-binding-factor-RbfA
MATNRRVERVAELIKREVSQMLLNGIKDDRVGTGMVSVTDVDVSGDLQHAKIFVSIYGTEEAKAETMAGLKSATGYVRSELGSRVRLRRTPEVIFVEDDSIERGTNVISLLNRIRDERTASSQEDALE
>NZ_AP018255.1|WP_096690973.1|7880045_7880282_+|DUF4327-family-protein
MSVNTVPSINYYSLGVIQDEARRLVQKGVVSRQQPIYTLCQYIPAREWVCIECELEKCDFLLRDRIADLIGREEWEND

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Crispr_ID: NZ_AP018255_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_31

8345459-8345546

Unclear

A:N

Consensus_repeat	Method
ATCCTCACTTGAAGGAAGGCGCCGTT	CRISPRCasFinder

1 spacers

PD-DExK,Cas14u_CAS-V

The CRISPR arrays of NZ_AP018255_31

>merge|NZ_AP018255|31|8345459-8345546|CRISPRCasFinder
ATCCTCACTTGAAGGAAGGCGCCGTTTAATATTTTCCTAGAGGATATATTGACATTGAACTTATCCTCGCTTGAAGGAAGGCGCCGTT

>NZ_AP018255|31|30|8345459-8345546|CRISPRCasFinder
ATCCTCACTTGAAGGAAGGCGCCGTT	TAATATTTTCCTAGAGGATATATTGACATTGAACTT
ATCCTCGCTTGAAGGAAGGCGCCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096691329.1\|8354465_8355236_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018255.1\|WP_096691327.1\|8347047_8352471_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_AP018255.1\|WP_096691322.1\|8341612_8342704_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_AP018255.1\|WP_096691318.1\|8338156_8339293_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_AP018255.1\|WP_096691319.1\|8339496_8340369_-\|isopenicillin-N-synthase-family-oxygenase	unknown	unknown	gnl\|CDD\|226022
NZ_AP018255.1\|WP_096691321.1\|8341153_8341519_-\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018255.1\|WP_096691324.1\|8343641_8343848_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182059
NZ_AP018255.1\|WP_096691323.1\|8342965_8343334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691332.1\|8356894_8357110_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691325.1\|8343966_8345454_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224893
NZ_AP018255.1\|WP_096691334.1\|8360134_8363287_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_AP018255.1\|WP_096691320.1\|8340472_8340979_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_AP018255.1\|WP_096691317.1\|8337380_8337770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691316.1\|8335988_8337350_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173815
NZ_AP018255.1\|WP_096691328.1\|8352601_8353336_-\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|239473
NZ_AP018255.1\|WP_096691331.1\|8356349_8356802_-\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NZ_AP018255.1\|WP_096691330.1\|8355710_8356283_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018255.1\|WP_096691326.1\|8345667_8346924_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP018255.1\|WP_096694420.1\|8353750_8354371_-\|TenA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|381703
NZ_AP018255.1\|WP_096691333.1\|8357813_8359433_-\|transposase	Cas14u_CAS-V	-	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096691329.1\|8354465_8355236_-\|hypothetical-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	8.64575e-18
NZ_AP018255.1\|WP_096691327.1\|8347047_8352471_+\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_AP018255.1\|WP_096691322.1\|8341612_8342704_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_AP018255.1\|WP_096691318.1\|8338156_8339293_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.56329e-36
NZ_AP018255.1\|WP_096691319.1\|8339496_8340369_-\|isopenicillin-N-synthase-family-oxygenase	gnl\|CDD\|226022	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only].	4.09925e-70
NZ_AP018255.1\|WP_096691331.1\|8356349_8356802_-\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	7.32743e-25
NZ_AP018255.1\|WP_096691324.1\|8343641_8343848_-\|hypothetical-protein	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	3.06038e-10
NZ_AP018255.1\|WP_096691325.1\|8343966_8345454_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	2.32507e-165
NZ_AP018255.1\|WP_096691334.1\|8360134_8363287_-\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.003e-05
NZ_AP018255.1\|WP_096691320.1\|8340472_8340979_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.67753e-19
NZ_AP018255.1\|WP_096691316.1\|8335988_8337350_+\|S8-family-serine-peptidase	gnl\|CDD\|173815	cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.40715e-85
NZ_AP018255.1\|WP_096691328.1\|8352601_8353336_-\|carbonic-anhydrase	gnl\|CDD\|239473	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	2.61878e-74
NZ_AP018255.1\|WP_096691330.1\|8355710_8356283_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.96678e-20
NZ_AP018255.1\|WP_096691326.1\|8345667_8346924_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.85379e-103
NZ_AP018255.1\|WP_096694420.1\|8353750_8354371_-\|TenA-family-transcriptional-regulator	gnl\|CDD\|381703	cd19368, TenA_C_AtTH2-like, TenA_C family similar to the N-terminal TenA_C domain of Arabidopsis thaliana thiamine requiring 2. This TenA family belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. Arabidopsis thaliana TH2 is an orphan enzyme thiamin monophosphate phosphatase which has a haloacid dehalogenase (HAD) family domain fused to its TenA_C domain, it's TenA_C domain has thiamin salvage hydrolase activity against amino-HMP. This family includes mostly uncharacterized single-domain TenA_C- like proteins; some however have additional domains such as a HAD family domain or a kinase domain It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.	1.63837e-89

>NZ_AP018255.1|WP_096691325.1|8343966_8345454_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MINSASQAQTPLLTALYECAKSSHAPFYTPGHKRGVGISPSLIDVFGKSVFTADLPELTELDNLFAPEGVIDEAQQLAAEAFGAARTWFLVNGSTCGIEAAIMATCNAGDKIILPRNVHSSVIAGLILSGAIPIFINPEYDAVLDIAHSITPESVAVALHQHPDAKAVLMVYPTYYGVCGDVAKIANIVHQYNIPLILDEAHGAHFAFHPDLPISGLAAGADICVQSTHKTLGAMTQASMLHVQGNIVNYDRISKVLQLVQSTSPSYILMASLDAARAQMALHGNSLITQTLQFAHTARLNINKIPGLSTPLSPPYQALLGGFINLDATRLTINVSNLGITGFEADEILETQLAVRSELASLQNLTFIISIGNTQQDIDKLIQAFNTLAGMAPVSKNNTKLTSAKILYSLTASNSILHISPREAYFAASETLPLDQTYSRISAETICPYPPGIPVLMPGEIITKEALEYLQKVKVLGGFLTGCSDTTLKTLKVIA
>NZ_AP018255.1|WP_096691324.1|8343641_8343848_-|hypothetical-protein
MIPSLISIPEPQIPTPNPNPLPSPQPSPNPEPGIVPDPTPQPIPAPVPEPVPAPIPQPVPGPIPQTVP
>NZ_AP018255.1|WP_096691323.1|8342965_8343334_+|hypothetical-protein
MGKLLQFKSVPKVLFPIIALPFVAFTSQAALAEVCNIQLHNSSSFKIREVKMSHVDKDDWGENLVDNLEDKVVWQGQSVNMHFDRDSDKCLYDMKIINEHHQEEELHGVNLCENPDFEISDE
>NZ_AP018255.1|WP_096691322.1|8341612_8342704_-|redox-regulated-ATPase-YchF
MLRAGIVGLPNVGKSTLFNALVENAKAEAANFPFCTKDPNVGIVSVPDERLNVLSKLSSSKQIVPAQVEFVDIAGLIKGASKGEGMGNAFLSNIREVDAIVHMVRCFENDDIIHVSGSVDPVRDIETINLELALADLGQVDKRIERTKKQARASKEAQAELVVLEKVAAQLNEGKSVRQIDLTEEELETIKFLGLLTAKPIIFAANVSEDDLASGNKYVEQVRAIAEQEKAQVVVVSAQVESELIELPAEERADFLASLGVEEGGLKSLIRATYALLGLRTYFTTGEKESRAWTIKAGMKAPQAAGVIHSDFERCFIRAETVAYNDLISSGSFSGAREKGLLRKEGKEYVVQEGDVMEFLTSA
>NZ_AP018255.1|WP_096691321.1|8341153_8341519_-|hypothetical-protein
MAYSDFTLEMVLEQFNLSIRETRSLIQSQSVIQAPVVVIESAKRGILENGLGQCAAAMVAAQLFNQTHNLAIPSVYGCVTSGSSWKFLKLSGTELVVDITEYDITPIERLLGILLATITTD
>NZ_AP018255.1|WP_096691320.1|8340472_8340979_+|GNAT-family-N-acetyltransferase
MLSIRFADIEKDINNIRELFNENLSEVHPIFARDFNINLDVNELLAQDIAKLNQFTAPNGGLFLAQVENKNVGCAGFRQNSESIAEVKRMYVKPEYRRQGIGRTLLQAIINQTSNIGYSKLRLDTPDYAQEAQSLYRSFGFKEISPYLESDIPEELHPKWIFMELTTF
>NZ_AP018255.1|WP_096691319.1|8339496_8340369_-|isopenicillin-N-synthase-family-oxygenase
MYQIPLIDFCHIKSENIIKQIYQACSEVGFMYLQNVNISQDLIEKIFNTSKSFFNQPLEIKQKSAWSDEFSNQGYVGIERERLNPNQPGDLKEAFNVSRLNNQTSHIIAQYPYIVEFFNACTKLSNQILEAIGRALELPTNFFANNHNQNHHTLRLLHYPPLQKSPHSRQTRAGEHSDYGSITLLFQHEVSGLEVKTISGEWIAAPVIPGTVVVNTGDLMQRWTNNIFCSTKHRVVIPDNLNQSRYSIAFFCHPNDDTQITCLPSCMNESPIYPPISAIEYLLTRLKSTY
>NZ_AP018255.1|WP_096691318.1|8338156_8339293_-|FAD-binding-oxidoreductase
MESYDWVVIGAGFTGAALGYELVKKGFSVVLLEQNAVPDNATRYSYGGLAFWSGNSSLTRQLCNEGKQRYGELLHELGDDIEYREIDLLLTIDASSDPNVVAESYSRFQTVPQLLCVEAACELEPLLNKNAISGALTVKHGHIQPENTAQAYIQAFLKNGGKILFTKVLDIQSLEVEYKNLAICAGGITRQLLNKSGIFLQQYFTHAEILETAPIDVKLSTLVMPAVLQRFGFEAKAGQDDEVWRHPGSEPEAAILDTGAVQFLDGSMRIGQISRTLTDPDAKVDAVESEKWLRNNIGQVLPCLSSVPATWRHCLVAFSKDSLPLVGAVPEHDNIYIFSGFSNPLVYIPPLAYRFANWVAGQEDEIINQLSPNRFINF
>NZ_AP018255.1|WP_096691317.1|8337380_8337770_+|hypothetical-protein
MYQRNPFNHKISVDFANRLSNLQPQQKVRVIVFLHLDNGKSCGARQSPAERKAAIESLRNSAKNAFEYILNIIKDFGGQPLTENPGALGQIPIEICAAGVNALAESDMVKAVLEDQIIEPGDGTESHNI
>NZ_AP018255.1|WP_096691316.1|8335988_8337350_+|S8-family-serine-peptidase
MSIENKISPAFDPFLAGLDEDDKRDAIVIYEAPQTEGLPKRGRLREIHSRLEKSQQRASIQKALQEEIFDQYQEASRDLGYSDDPLEISLIGSGTLPVATVEVTHKTLEALAEQPRVVAVLPNQSIHLIQPRRVEYADLVTQGSEISTTWGLDSLDIPKLWETTKGENVNVAVLDTGVYAAHPALNNRVKEFVVIDPLGRRITASPAFDSGQHGTHVCGTIAGGKTDKGLSIGVAPNANLLVAGVLIGNTTLRTLLEGISWAIETGADIINMSLGMSYYEPLFTEVLDILINQYGILPVVAVGNENHGNTSSPGNSYNAFSVGAIEKLSNNKHDVAFFSSGASLVFPDQEDAGRLVTKPDVVAPGTQIYSCIPPTRTPEGTYAYNYMDGTSMATPHVAGVAALLMAANPRASVIDIIRVLKETAKHPAGGTRRPDNRWGWGLIQPLEALQALK
>NZ_AP018255.1|WP_096691326.1|8345667_8346924_+|cytochrome-P450
MLNNTSVTQTDYSPLSPQHQANPYEFYARSRQEYPVFYSPMLKLWIVTRYAEITQVLKDTNRFSSANSNLVDLEISPEVEAILKEGYPDMPRPSLVDNDPPGHTRIRSLVSSVLTPARIAANEPHIYATANALIDDWIDSGCVDIIKGFASPLPLFIIGDFLGIPRQDIHTVKKWCDDWLIILSGGAPVEQHVGCARSFVSLQHYVADILKQRSINPQDDLLTGLLNASLEGEANLSTSEIISLVMQLLFAGHETTAHLIGNAVALLVQHPQQLEALRQNPSLAVNAVEEVIRFESPVPGLIRTTTEAVELGGVQLPKGARVQLLYASGNRDNIQFPEPERFDIHRIPNGKHLAFGGGIHYCVGAALARLEGRIALEVLTQRLSNLRMVPNQEIAYVPSIIIRGLLKFLVEWDVVGHN
>NZ_AP018255.1|WP_096691327.1|8347047_8352471_+|AAA-family-ATPase
MLSAINLSGYEITEVIDEGLNTIIYRGVSQLHKQNVILKVLAAEYPTLEQIARLKHEHILTKNLDLEGIVKVLGLENHHKRLILVLQDFGGISLKKFLYTEKLSIEYFVSIAVQLARALVSLHSHHIIHKDIKPSNIIINPQSGQVKITDFGIASRLDKYSAQLTNPNQIEGTLGYVSPEQTGRMNRVVDYRSDFYSLGVTFYEILSGQLPFTTLDPLEIIYCHLARQPKPIQELNPEVSAPIAAIVTKLMAKNAEDRYQTGVGLLADLEFYLDHIQSLGDITQFIPGKKDRAAQLLIPQKLYGREQEISMLLAAFDRTSQGDSEIILVSGYSGIGKSSLVAEVHKPIVRQQGYFISGKFDQLGRNIPYASLIQAFQSLMRQLLTESTDKLQNWQDKLLAALGANGQVIIDVIPEVELIIGKQPEVPQLGAVESQKRFHRVFQQFIQVFTQPEHPLVLFLDDLQWADTASLNLIQVLMTNLDSKNLLLIGAYRDNEVSAAHGLINTLSEIEQAGTVINNIVLRPLELTHVQQIVVDTLSNTEETDNLAELLFYKTQGNPFFITQLLNTLSQEKLLKFDFEKEQWVWDIQDILSAGIADKSVVELIASNIQKLPEQTQMVLKLAACIGSRFSLDVLATVSEQSVLTVASALDSALQQGLILPLNNHYKVPLLFASEELEILDFDETRVKYRFLHDRVQQAAYALIPSELKRETHQRIGQLLLKNTSQSKLESNIFDIVNQLNVGIDRLTQSENHELARLNLIAGRKAKASAAYEGAFKYLSVAILLSPDSWQSEYSVTLLMHEEAAEAAYLTGNFVDTEQWADIVLQQAKTILDKVKVYEVKILTKIAQNELLEAVKLGLQVLELLGVQLPEIPTPSDIQLALQETASNLQGRCISDLSNLPLMTDAYQLAAMRMLSITCFPTITAAPALFPLTVFSQVNLSIKYGNAPFSTFAYATYGLILQGFCQDIEGCYQFGKLALNLIEQLNALQLKAKTYFMVAVSTKHGKEHIQHTLPLFQKAYESGLENGDLEYAGHAAVNRYQYAYFAANELTLLSREIASVNDALKFKQAANSNHLATLQQVVLNLTSQVEKPYNLVGVYNEETTLPLQLAANDRIGLHFFYLHKVILCYLFGEYEQAVVNAEQAGVYLDAVAGCLYGPILNFYDSLAKLAVYFDSQTIPQEIQATLQANQDKLKLWSYHAPMNFQNKYDLVEAEKYRLLGQNYQAMEYYDKAIASAAENGYIQEEALANELAAKFYLSQGKYKIAKTYMTDAYYGYNRWGAVAKVKDLEKRYPDCIIYHVNTNIQLDKHPTITGAINKTTVSTSSTSQILDLATVIKASSAIQSEINLENLPSTLLHIIIENTGAQKGCIILEKDNHLLIEAIDIDDQLNHIVVQSTPVEQSADIPISIINYVARTQQILVLNHAKLDQIYSQDPYIQQHQSKSILCVPILYQTKFIGIIYLENNLTISAFTAERLSLIKILASQAAIAIKNARLLAHEQEKTELLQKSETELRQKSTDLEQALIKLQNTQSQLIQTEKISALGQMVAGIAHEVNNPVSFISGNLSHTKQYVKDLIHLLTLYQNELPNPGTEITSEIENVDLEYLIKDLLKMLDSMKIGTDRIKEIMQSLRNYSRTDGNEKKAVDIHEGINSTLIILSHRLKSKPERPAIEIIKSYGDLSLVECFPGQLNQVFTNLIANAIDAIDESNLGKSYTEIEKKPNQIRITTSLDNQQVKISIADNGPGMPESVRNQIFQAFFTTKPEGKGTGLGLSISYEIITQKHGGTIECISSLGQGTEFVIQIPVLGE
>NZ_AP018255.1|WP_096691328.1|8352601_8353336_-|carbonic-anhydrase
MTRINGFVGRRNLLKLAGIGGAGIAASAVAGVMLSSEAEAQTTPTTTENKPKPVSPDEALKKLLRGNERFIAGKRANPNQSKLRLLETSVAQYPYASILGCADSRVPAEIVFDQGLGDLFVVRVAGNVASQTAIGSLEFSSAVLGSQLIIVLGHAKCGAVVAAVKGDPLPGRIGVFVEEIKPAVESVRQKTGDLEKNSIIANIQYQVRKLPETSTILGKLVNEGKLKIVGGIYDLASGKVTLVT
>NZ_AP018255.1|WP_096694420.1|8353750_8354371_-|TenA-family-transcriptional-regulator
MSISSTLWQANIDLAQACLDNPFVRGIGDGSLPRHKFAYYVGQDAFFLEAFARAYSIAAAKAPDFNGFRTFHALAGGVLEELQLHTNYASSWGIDLHSIQPGAATRRYTDFLIATAWSGNSGLTAAAMSPCMRLYEFLGKELACDGIPEHDYSEWIRIYSGADFDEIAQKLADLVDTYTTDTNLIHSTYRYAMQCELDFFQAAWIN
>NZ_AP018255.1|WP_096691329.1|8354465_8355236_-|hypothetical-protein
MKNQIIATVTFLTTLTLTTAVQAANTEHVRQLLATKQCQNCDLSGAGLVMADLSGADLSGANLALANLSRANLTGADLRGANLTSASLFGANLNGAKLGGATIVGTDLRNAYLYNVELTNVTFNSANLQGAAGIPSQIATPDEFYALGVAAGEKGNQQQAIDYFNQAIAIKPDYAGAFLARGIARYQLFDRTGAFQDAVRAEKMFKAQNNLNGSQTAQAFITELKAPQDTQVSAGKPNFMDFVSGVASVLLQFLPF
>NZ_AP018255.1|WP_096691330.1|8355710_8356283_-|pentapeptide-repeat-containing-protein
MHKQNQRQGLLIILTAVLTGAVLVAGTGIYLLLKSVEKPVSTESLDNRAYNDSVAVPDISEAPVDTSVPVVPSTVEKPTTVTQPSQSKITIVTSNTRKNYGGANFQGEDLRGKSFRQAQMGGANLANSNLSGVDLSGANMGGANLARANLTNANLSNTDLRGANLSGANLKGANLDGAKTDGANLNGALR
>NZ_AP018255.1|WP_096691331.1|8356349_8356802_-|DUF202-domain-containing-protein
MTRLRKIDRIREYQANERTFLAWVRTSIAFIGFGFAIARFGLFLRQLDAATTERAPIPHPVFNSENLGISLVVLGIVTIVFAVWRYDQIYQQIQREDYQPNRIMVWVLAVVIGILGSFTIPLLILRDTANSIRTQPPSRKEGASKTVPHD
>NZ_AP018255.1|WP_096691332.1|8356894_8357110_-|hypothetical-protein
MKDGEGKDSFYQQLTEMNKKLMFCKSFEEIEHVVNKLVLEISKQSLQLSDTKRIISNIEKVIKVDTYSIPN
>NZ_AP018255.1|WP_096691333.1|8357813_8359433_-|transposase
MAKKEKKPSFVTEFELVVTSQAEKELDARFQSGRHLYNAVLGEAIIRVEQVRSSDPYQEAKKIKVKSDEDKKLRNQLFATARKQSRFSDFELQDFATITAKDAKWIAEKLDSHTIQKIGTRAFKAAERVLFGKARKVRFKSFNAFHSLEGKTNASGIRFFGGTDCCIKWGKNLTLPIRFPDKWNEVLEYGYRSPVKYCRILWREINGKCRWYIQLISDGVPYKETPAYKLHNKVNPNTGLVGIDLNVSVVAVVGDDKAGLFPFADNVPTFEQEIKALQRKMEWSRRATNPTNYEPDFEKKVGRRNKHKKGKVKKGTRRWFNSNAYKKYARKKRELERRKAAYSKSQNRGLANKIVREFGNNIKAEKVSVRAWHRRYGKAISAKSPGFFQSELSRKAESAGGKFTTFSTRKTALSQTHLDGTRIKKSLSERVHKDVSGFEMQRDLFSAYLSRFVNDDSELQATQAQSNWGRTEPFLTQAWREFKTASAKTSSKPGGVISPAEQDCVKAKQPNQIALNKGKKLGKNGVRNNSVVSPLTPSL
>NZ_AP018255.1|WP_096691334.1|8360134_8363287_-|hypothetical-protein
MYQLGDLLQSYSSQLGLFSVVITEGITPEQASLMFSGPKFLVALFAGLLMAVAFQLLLTNFSVAIGISAGGGGGSDDDADTVGNQIRAVEAKVGAWALFTVSLALGSACYLAVKLSLIESALLGSIIGVVIWSAFFALITWLGSNAVGSLIGAIVSTANSGLKGLMGTASAAIGANVAKNQAVSTAEDIAAAVRRELTSGFDASSIKNTLQSSLSGLQLPNLNLNEIRGQFDKLLKDVDFESLGDSDLLKNVNRQTLVDLISSRTDFSKSDVNRIADQLEAAWQQATTRKTPTDQVIGLLQSASPDDLKPENIGARLQELVAVGNGNGNSSSRGGLVETAVGTSLSAVAGTILNKVDFSKVDIDKVTNQLQEIKGKVKDVDIDKITNQLKQLRDKATEKVATAIPEAASAITNNTEDNTIKEDIEEYILYSLPWHFNRITIKDEFHEVIFDPNAAPSAIRRQIEGLDNSYFANLLKQRGDLSEARVKEISEQLESVRSYVFERVKNSEGEEESQSLSGRVENYLRSTGKEELTAEGIEKNFSNLIEDAQVNADELGKRFGNINRDTLVQVLASRQDLSEEEANNIVEKLEGVRDRVLNQAREIQSQVTTQAQELRQRVEDYLRNTNLEELNPEGIQRDFRTLLDDPQAGASALRGRLSQFDRETLVKLLSQRQDLSEERVNEILNNLESVRDNILQAPQKAKEQYDQAINTIIEYLRSTNLEELNPEGIQRDLQKLLNDPSEGAVALRERLSQFDRETLVVLLTQRGDLSAEQINQVIDSFQASVNNIIRAPQRLAKRATKRVADFEANLENYLRNTNKEELNPDAIKRDLALLLQDPRAGVGSLSDRISKIDRSTLVALLTQREDISEEEANRIVGQIESVRDSVVEQYKQIQQRVQSVLDNTFGQIRSYLNSLDRPELNYESIQQDFTQLFDDPQAGFDALRARLSQFDRNTLVAVLSSREDISEEQANQIVNRIESTRDSVLQRAELIQTETQKRLIQIKENAKKQARDTKKAVADAAWWLLGTAVTSLAVSAFAGAVAVRGLWFLG

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Crispr_ID: NZ_AP018255_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_32

8355847-8355930

Unclear

A:N

Consensus_repeat	Method
GCAAGGTTTGCTCCACCCATATTG	CRISPRCasFinder

1 spacers

PD-DExK,Cas14u_CAS-V

The CRISPR arrays of NZ_AP018255_32

>merge|NZ_AP018255|32|8355847-8355930|CRISPRCasFinder
GCAAGGTTTGCTCCACCCATATTGGCGCCACTCAAATCAACCCCACTCAAGTTAGAATTCGCAAGGTTTGCTCCACCCATTTGC

>NZ_AP018255|32|31|8355847-8355930|CRISPRCasFinder
GCAAGGTTTGCTCCACCCATATTG	GCGCCACTCAAATCAACCCCACTCAAGTTAGAATTC
GCAAGGTTTGCTCCACCCATTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096691338.1\|8367137_8367539_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691329.1\|8354465_8355236_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018255.1\|WP_096691327.1\|8347047_8352471_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_AP018255.1\|WP_096691322.1\|8341612_8342704_-\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_AP018255.1\|WP_096691340.1\|8369258_8370215_-\|YegS/Rv2252/BmrU-family-lipid-kinase	unknown	unknown	gnl\|CDD\|234850
NZ_AP018255.1\|WP_096691335.1\|8363762_8365730_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378584
NZ_AP018255.1\|WP_096691331.1\|8356349_8356802_-\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NZ_AP018255.1\|WP_096691337.1\|8366445_8366904_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372936
NZ_AP018255.1\|WP_096691324.1\|8343641_8343848_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182059
NZ_AP018255.1\|WP_096691323.1\|8342965_8343334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691332.1\|8356894_8357110_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691325.1\|8343966_8345454_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224893
NZ_AP018255.1\|WP_096691334.1\|8360134_8363287_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_AP018255.1\|WP_096691326.1\|8345667_8346924_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP018255.1\|WP_096691321.1\|8341153_8341519_-\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018255.1\|WP_096691328.1\|8352601_8353336_-\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|239473
NZ_AP018255.1\|WP_096691339.1\|8367608_8369180_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277324
NZ_AP018255.1\|WP_096694420.1\|8353750_8354371_-\|TenA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|381703
NZ_AP018255.1\|WP_096691333.1\|8357813_8359433_-\|transposase	Cas14u_CAS-V	-	unknown
NZ_AP018255.1\|WP_096691336.1\|8365839_8366307_+\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|335963

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096691329.1\|8354465_8355236_-\|hypothetical-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	8.64575e-18
NZ_AP018255.1\|WP_096691327.1\|8347047_8352471_+\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_AP018255.1\|WP_096691322.1\|8341612_8342704_-\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_AP018255.1\|WP_096691340.1\|8369258_8370215_-\|YegS/Rv2252/BmrU-family-lipid-kinase	gnl\|CDD\|234850	PRK00861, PRK00861, putative lipid kinase; Reviewed.	9.80278e-171
NZ_AP018255.1\|WP_096691335.1\|8363762_8365730_+\|hypothetical-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	0.00300115
NZ_AP018255.1\|WP_096691331.1\|8356349_8356802_-\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	7.32743e-25
NZ_AP018255.1\|WP_096691324.1\|8343641_8343848_-\|hypothetical-protein	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	3.06038e-10
NZ_AP018255.1\|WP_096691337.1\|8366445_8366904_+\|hypothetical-protein	gnl\|CDD\|372936	pfam14159, CAAD, CAAD domains of cyanobacterial aminoacyl-tRNA synthetase. This domain is present in aminoacyl-tRNA synthetases (aaRSs), enzymes that couple tRNAs to their cognate amino acids. aaRSs from cyanobacteria containing the CAAD (for cyanobacterial aminoacyl-tRNA synthetases appended domain) protein domains are localized in the thylakoid membrane. The domain bears two putative transmembrane helices and is present in glutamyl-, isoleucyl-, leucyl-, and valyl-tRNA synthetases, the latter of which has probably recruited the domain more than once during evolution.	4.71789e-39
NZ_AP018255.1\|WP_096691325.1\|8343966_8345454_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	2.32507e-165
NZ_AP018255.1\|WP_096691334.1\|8360134_8363287_-\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.003e-05
NZ_AP018255.1\|WP_096691326.1\|8345667_8346924_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.85379e-103
NZ_AP018255.1\|WP_096691336.1\|8365839_8366307_+\|BON-domain-containing-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	1.07276e-05
NZ_AP018255.1\|WP_096691328.1\|8352601_8353336_-\|carbonic-anhydrase	gnl\|CDD\|239473	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	2.61878e-74
NZ_AP018255.1\|WP_096691339.1\|8367608_8369180_-\|metallophosphoesterase	gnl\|CDD\|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	0.000753405
NZ_AP018255.1\|WP_096694420.1\|8353750_8354371_-\|TenA-family-transcriptional-regulator	gnl\|CDD\|381703	cd19368, TenA_C_AtTH2-like, TenA_C family similar to the N-terminal TenA_C domain of Arabidopsis thaliana thiamine requiring 2. This TenA family belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. Arabidopsis thaliana TH2 is an orphan enzyme thiamin monophosphate phosphatase which has a haloacid dehalogenase (HAD) family domain fused to its TenA_C domain, it's TenA_C domain has thiamin salvage hydrolase activity against amino-HMP. This family includes mostly uncharacterized single-domain TenA_C- like proteins; some however have additional domains such as a HAD family domain or a kinase domain It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.	1.63837e-89

>NZ_AP018255.1|WP_096691329.1|8354465_8355236_-|hypothetical-protein
MKNQIIATVTFLTTLTLTTAVQAANTEHVRQLLATKQCQNCDLSGAGLVMADLSGADLSGANLALANLSRANLTGADLRGANLTSASLFGANLNGAKLGGATIVGTDLRNAYLYNVELTNVTFNSANLQGAAGIPSQIATPDEFYALGVAAGEKGNQQQAIDYFNQAIAIKPDYAGAFLARGIARYQLFDRTGAFQDAVRAEKMFKAQNNLNGSQTAQAFITELKAPQDTQVSAGKPNFMDFVSGVASVLLQFLPF
>NZ_AP018255.1|WP_096694420.1|8353750_8354371_-|TenA-family-transcriptional-regulator
MSISSTLWQANIDLAQACLDNPFVRGIGDGSLPRHKFAYYVGQDAFFLEAFARAYSIAAAKAPDFNGFRTFHALAGGVLEELQLHTNYASSWGIDLHSIQPGAATRRYTDFLIATAWSGNSGLTAAAMSPCMRLYEFLGKELACDGIPEHDYSEWIRIYSGADFDEIAQKLADLVDTYTTDTNLIHSTYRYAMQCELDFFQAAWIN
>NZ_AP018255.1|WP_096691328.1|8352601_8353336_-|carbonic-anhydrase
MTRINGFVGRRNLLKLAGIGGAGIAASAVAGVMLSSEAEAQTTPTTTENKPKPVSPDEALKKLLRGNERFIAGKRANPNQSKLRLLETSVAQYPYASILGCADSRVPAEIVFDQGLGDLFVVRVAGNVASQTAIGSLEFSSAVLGSQLIIVLGHAKCGAVVAAVKGDPLPGRIGVFVEEIKPAVESVRQKTGDLEKNSIIANIQYQVRKLPETSTILGKLVNEGKLKIVGGIYDLASGKVTLVT
>NZ_AP018255.1|WP_096691327.1|8347047_8352471_+|AAA-family-ATPase
MLSAINLSGYEITEVIDEGLNTIIYRGVSQLHKQNVILKVLAAEYPTLEQIARLKHEHILTKNLDLEGIVKVLGLENHHKRLILVLQDFGGISLKKFLYTEKLSIEYFVSIAVQLARALVSLHSHHIIHKDIKPSNIIINPQSGQVKITDFGIASRLDKYSAQLTNPNQIEGTLGYVSPEQTGRMNRVVDYRSDFYSLGVTFYEILSGQLPFTTLDPLEIIYCHLARQPKPIQELNPEVSAPIAAIVTKLMAKNAEDRYQTGVGLLADLEFYLDHIQSLGDITQFIPGKKDRAAQLLIPQKLYGREQEISMLLAAFDRTSQGDSEIILVSGYSGIGKSSLVAEVHKPIVRQQGYFISGKFDQLGRNIPYASLIQAFQSLMRQLLTESTDKLQNWQDKLLAALGANGQVIIDVIPEVELIIGKQPEVPQLGAVESQKRFHRVFQQFIQVFTQPEHPLVLFLDDLQWADTASLNLIQVLMTNLDSKNLLLIGAYRDNEVSAAHGLINTLSEIEQAGTVINNIVLRPLELTHVQQIVVDTLSNTEETDNLAELLFYKTQGNPFFITQLLNTLSQEKLLKFDFEKEQWVWDIQDILSAGIADKSVVELIASNIQKLPEQTQMVLKLAACIGSRFSLDVLATVSEQSVLTVASALDSALQQGLILPLNNHYKVPLLFASEELEILDFDETRVKYRFLHDRVQQAAYALIPSELKRETHQRIGQLLLKNTSQSKLESNIFDIVNQLNVGIDRLTQSENHELARLNLIAGRKAKASAAYEGAFKYLSVAILLSPDSWQSEYSVTLLMHEEAAEAAYLTGNFVDTEQWADIVLQQAKTILDKVKVYEVKILTKIAQNELLEAVKLGLQVLELLGVQLPEIPTPSDIQLALQETASNLQGRCISDLSNLPLMTDAYQLAAMRMLSITCFPTITAAPALFPLTVFSQVNLSIKYGNAPFSTFAYATYGLILQGFCQDIEGCYQFGKLALNLIEQLNALQLKAKTYFMVAVSTKHGKEHIQHTLPLFQKAYESGLENGDLEYAGHAAVNRYQYAYFAANELTLLSREIASVNDALKFKQAANSNHLATLQQVVLNLTSQVEKPYNLVGVYNEETTLPLQLAANDRIGLHFFYLHKVILCYLFGEYEQAVVNAEQAGVYLDAVAGCLYGPILNFYDSLAKLAVYFDSQTIPQEIQATLQANQDKLKLWSYHAPMNFQNKYDLVEAEKYRLLGQNYQAMEYYDKAIASAAENGYIQEEALANELAAKFYLSQGKYKIAKTYMTDAYYGYNRWGAVAKVKDLEKRYPDCIIYHVNTNIQLDKHPTITGAINKTTVSTSSTSQILDLATVIKASSAIQSEINLENLPSTLLHIIIENTGAQKGCIILEKDNHLLIEAIDIDDQLNHIVVQSTPVEQSADIPISIINYVARTQQILVLNHAKLDQIYSQDPYIQQHQSKSILCVPILYQTKFIGIIYLENNLTISAFTAERLSLIKILASQAAIAIKNARLLAHEQEKTELLQKSETELRQKSTDLEQALIKLQNTQSQLIQTEKISALGQMVAGIAHEVNNPVSFISGNLSHTKQYVKDLIHLLTLYQNELPNPGTEITSEIENVDLEYLIKDLLKMLDSMKIGTDRIKEIMQSLRNYSRTDGNEKKAVDIHEGINSTLIILSHRLKSKPERPAIEIIKSYGDLSLVECFPGQLNQVFTNLIANAIDAIDESNLGKSYTEIEKKPNQIRITTSLDNQQVKISIADNGPGMPESVRNQIFQAFFTTKPEGKGTGLGLSISYEIITQKHGGTIECISSLGQGTEFVIQIPVLGE
>NZ_AP018255.1|WP_096691326.1|8345667_8346924_+|cytochrome-P450
MLNNTSVTQTDYSPLSPQHQANPYEFYARSRQEYPVFYSPMLKLWIVTRYAEITQVLKDTNRFSSANSNLVDLEISPEVEAILKEGYPDMPRPSLVDNDPPGHTRIRSLVSSVLTPARIAANEPHIYATANALIDDWIDSGCVDIIKGFASPLPLFIIGDFLGIPRQDIHTVKKWCDDWLIILSGGAPVEQHVGCARSFVSLQHYVADILKQRSINPQDDLLTGLLNASLEGEANLSTSEIISLVMQLLFAGHETTAHLIGNAVALLVQHPQQLEALRQNPSLAVNAVEEVIRFESPVPGLIRTTTEAVELGGVQLPKGARVQLLYASGNRDNIQFPEPERFDIHRIPNGKHLAFGGGIHYCVGAALARLEGRIALEVLTQRLSNLRMVPNQEIAYVPSIIIRGLLKFLVEWDVVGHN
>NZ_AP018255.1|WP_096691325.1|8343966_8345454_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MINSASQAQTPLLTALYECAKSSHAPFYTPGHKRGVGISPSLIDVFGKSVFTADLPELTELDNLFAPEGVIDEAQQLAAEAFGAARTWFLVNGSTCGIEAAIMATCNAGDKIILPRNVHSSVIAGLILSGAIPIFINPEYDAVLDIAHSITPESVAVALHQHPDAKAVLMVYPTYYGVCGDVAKIANIVHQYNIPLILDEAHGAHFAFHPDLPISGLAAGADICVQSTHKTLGAMTQASMLHVQGNIVNYDRISKVLQLVQSTSPSYILMASLDAARAQMALHGNSLITQTLQFAHTARLNINKIPGLSTPLSPPYQALLGGFINLDATRLTINVSNLGITGFEADEILETQLAVRSELASLQNLTFIISIGNTQQDIDKLIQAFNTLAGMAPVSKNNTKLTSAKILYSLTASNSILHISPREAYFAASETLPLDQTYSRISAETICPYPPGIPVLMPGEIITKEALEYLQKVKVLGGFLTGCSDTTLKTLKVIA
>NZ_AP018255.1|WP_096691324.1|8343641_8343848_-|hypothetical-protein
MIPSLISIPEPQIPTPNPNPLPSPQPSPNPEPGIVPDPTPQPIPAPVPEPVPAPIPQPVPGPIPQTVP
>NZ_AP018255.1|WP_096691323.1|8342965_8343334_+|hypothetical-protein
MGKLLQFKSVPKVLFPIIALPFVAFTSQAALAEVCNIQLHNSSSFKIREVKMSHVDKDDWGENLVDNLEDKVVWQGQSVNMHFDRDSDKCLYDMKIINEHHQEEELHGVNLCENPDFEISDE
>NZ_AP018255.1|WP_096691322.1|8341612_8342704_-|redox-regulated-ATPase-YchF
MLRAGIVGLPNVGKSTLFNALVENAKAEAANFPFCTKDPNVGIVSVPDERLNVLSKLSSSKQIVPAQVEFVDIAGLIKGASKGEGMGNAFLSNIREVDAIVHMVRCFENDDIIHVSGSVDPVRDIETINLELALADLGQVDKRIERTKKQARASKEAQAELVVLEKVAAQLNEGKSVRQIDLTEEELETIKFLGLLTAKPIIFAANVSEDDLASGNKYVEQVRAIAEQEKAQVVVVSAQVESELIELPAEERADFLASLGVEEGGLKSLIRATYALLGLRTYFTTGEKESRAWTIKAGMKAPQAAGVIHSDFERCFIRAETVAYNDLISSGSFSGAREKGLLRKEGKEYVVQEGDVMEFLTSA
>NZ_AP018255.1|WP_096691321.1|8341153_8341519_-|hypothetical-protein
MAYSDFTLEMVLEQFNLSIRETRSLIQSQSVIQAPVVVIESAKRGILENGLGQCAAAMVAAQLFNQTHNLAIPSVYGCVTSGSSWKFLKLSGTELVVDITEYDITPIERLLGILLATITTD
>NZ_AP018255.1|WP_096691331.1|8356349_8356802_-|DUF202-domain-containing-protein
MTRLRKIDRIREYQANERTFLAWVRTSIAFIGFGFAIARFGLFLRQLDAATTERAPIPHPVFNSENLGISLVVLGIVTIVFAVWRYDQIYQQIQREDYQPNRIMVWVLAVVIGILGSFTIPLLILRDTANSIRTQPPSRKEGASKTVPHD
>NZ_AP018255.1|WP_096691332.1|8356894_8357110_-|hypothetical-protein
MKDGEGKDSFYQQLTEMNKKLMFCKSFEEIEHVVNKLVLEISKQSLQLSDTKRIISNIEKVIKVDTYSIPN
>NZ_AP018255.1|WP_096691333.1|8357813_8359433_-|transposase
MAKKEKKPSFVTEFELVVTSQAEKELDARFQSGRHLYNAVLGEAIIRVEQVRSSDPYQEAKKIKVKSDEDKKLRNQLFATARKQSRFSDFELQDFATITAKDAKWIAEKLDSHTIQKIGTRAFKAAERVLFGKARKVRFKSFNAFHSLEGKTNASGIRFFGGTDCCIKWGKNLTLPIRFPDKWNEVLEYGYRSPVKYCRILWREINGKCRWYIQLISDGVPYKETPAYKLHNKVNPNTGLVGIDLNVSVVAVVGDDKAGLFPFADNVPTFEQEIKALQRKMEWSRRATNPTNYEPDFEKKVGRRNKHKKGKVKKGTRRWFNSNAYKKYARKKRELERRKAAYSKSQNRGLANKIVREFGNNIKAEKVSVRAWHRRYGKAISAKSPGFFQSELSRKAESAGGKFTTFSTRKTALSQTHLDGTRIKKSLSERVHKDVSGFEMQRDLFSAYLSRFVNDDSELQATQAQSNWGRTEPFLTQAWREFKTASAKTSSKPGGVISPAEQDCVKAKQPNQIALNKGKKLGKNGVRNNSVVSPLTPSL
>NZ_AP018255.1|WP_096691334.1|8360134_8363287_-|hypothetical-protein
MYQLGDLLQSYSSQLGLFSVVITEGITPEQASLMFSGPKFLVALFAGLLMAVAFQLLLTNFSVAIGISAGGGGGSDDDADTVGNQIRAVEAKVGAWALFTVSLALGSACYLAVKLSLIESALLGSIIGVVIWSAFFALITWLGSNAVGSLIGAIVSTANSGLKGLMGTASAAIGANVAKNQAVSTAEDIAAAVRRELTSGFDASSIKNTLQSSLSGLQLPNLNLNEIRGQFDKLLKDVDFESLGDSDLLKNVNRQTLVDLISSRTDFSKSDVNRIADQLEAAWQQATTRKTPTDQVIGLLQSASPDDLKPENIGARLQELVAVGNGNGNSSSRGGLVETAVGTSLSAVAGTILNKVDFSKVDIDKVTNQLQEIKGKVKDVDIDKITNQLKQLRDKATEKVATAIPEAASAITNNTEDNTIKEDIEEYILYSLPWHFNRITIKDEFHEVIFDPNAAPSAIRRQIEGLDNSYFANLLKQRGDLSEARVKEISEQLESVRSYVFERVKNSEGEEESQSLSGRVENYLRSTGKEELTAEGIEKNFSNLIEDAQVNADELGKRFGNINRDTLVQVLASRQDLSEEEANNIVEKLEGVRDRVLNQAREIQSQVTTQAQELRQRVEDYLRNTNLEELNPEGIQRDFRTLLDDPQAGASALRGRLSQFDRETLVKLLSQRQDLSEERVNEILNNLESVRDNILQAPQKAKEQYDQAINTIIEYLRSTNLEELNPEGIQRDLQKLLNDPSEGAVALRERLSQFDRETLVVLLTQRGDLSAEQINQVIDSFQASVNNIIRAPQRLAKRATKRVADFEANLENYLRNTNKEELNPDAIKRDLALLLQDPRAGVGSLSDRISKIDRSTLVALLTQREDISEEEANRIVGQIESVRDSVVEQYKQIQQRVQSVLDNTFGQIRSYLNSLDRPELNYESIQQDFTQLFDDPQAGFDALRARLSQFDRNTLVAVLSSREDISEEQANQIVNRIESTRDSVLQRAELIQTETQKRLIQIKENAKKQARDTKKAVADAAWWLLGTAVTSLAVSAFAGAVAVRGLWFLG
>NZ_AP018255.1|WP_096691335.1|8363762_8365730_+|hypothetical-protein
MVVGLHRRAVGVFSHRREAENALHELRNSGFAMDRVSVIAQDIDGNDNIAGAEVHDKVGNKADEGASLGALSGGTLGGLTGLLVGLGTLAIPGVGPIMLAGATATAIATTLAGAGIGAAAGSLLGGLVGLGIPEEEARGYNSRVERGHYLVIVDGTASEIATAEAIMRRHGIEDFQVYDQPGREYDTASVVAAPVVAPYDASAVHPAAVVAPVYNSNVRSSNPLHRNRRIIGVFEHRRDAEAALTELRAAGFSMDEVSIIGKDAGGNVNTSVGGATGTDLRGNKADDGAKAGAATGAALGGLGGLLVGLGALAIPGVGPVLLGGAAATALATAATGAGIGAAAGGITGGLVGLGIPENKARVYNDKLNRGDYIVMVDATDDEVRRAEAILRRHNIQDYDVFDATDVSASRRERPAMDTNRVGYANTNSLSRGRRIIGVFEHRRDAEAALTELRDAGFSMDEVSIIGKDAGGNVNTSVGGATGTDLRGNKADDGAKAGAATGAALGGLGGLLVGLGALAIPGVGPVLLGGAAATALATAATGAGIGAAAGGITGGLVGLGIPENKARVYNDKLNRGDYIVMVDATDDEVRRAEAILRRHNIQDYDVFDATDVSASRRERPAMDTNRAGYTTDIPTTTGTINSDADVIIIDRRDETI
>NZ_AP018255.1|WP_096691336.1|8365839_8366307_+|BON-domain-containing-protein
MKKLTLLFISSVLALGTAACQQPAKTSADAPNDATANVNQIQTPSAQSTEAAKEDAQSQVRRDQLNADIQAREQRNNIANAGASTNRNPGDLASQVRSKLEANIPNGALTVEGDKNGAVTVTGTVPKKAQLAKIEPLAKEIKGVTKVVVNAKATE
>NZ_AP018255.1|WP_096691337.1|8366445_8366904_+|hypothetical-protein
METQEQPQYINPDITPETTPTSVNGVGTVEVPIKDDLPKLLPASESTTTQLQQISNQIAVFLARLPDYVGNFFNDYKPQITTVALIFAAIISVKLVFAVLDAVNDIPLFATLFELVGIGYTTWFVSRYLLKASTRQELASDFTTFKNQILGQ
>NZ_AP018255.1|WP_096691338.1|8367137_8367539_+|hypothetical-protein
MGNANQGIDSHERAERDQYDRGIIPAETAARKEREGELFKTKPTEEREAAALTDDQTSSGSVRTTDGYTVDNEGLLNNYAVEPEMYYETPGDARQVIEEDKQARLEELAQIKDHSEGELSMEDDERGRGTGAV
>NZ_AP018255.1|WP_096691339.1|8367608_8369180_-|metallophosphoesterase
MKLASEVAIAEKIRRMNQRVRWQDPLLVDRGIDQTKFVFDDGKASEQEFSFLVVGDSGSGSHTSHNPQRQVAELMLPHHDECRFMLHTGDVMYLVGSSEYYPQNFIKPYREFLVGAKHYKNIAYDKMTFKLPIIPVPGNHDYYDLPIFWSIVSLGTMPIRRLLKSKLDLDVGLHGSRAGDAYAKAFIDYLKAFNSDEQLIQHLDNHYDAKTDSGYCLRYEPGKFTRLPNRYYMFRYGDIDFFALDSNTFNDPLPIPKTSEGLAQRQELEVRLQELEQQKQQIVARISQLDPSKPNEAEELDDLHGRITQMDEMAFDIEKQLAPKNNQSVTDTEQLEWFGSKLVESWQNKEVRGRVVFFHHPPYVTEATKWQQAQTLAVRKRLREVLNKVAGKVNSIRKDRPIVDLVLNGHAHCLEYLQTQDTGYGDSGINWIVCGGSGFSLRRQRPEGNDLMETFNGQRRKVASSRLFVGRNGQSLQKRRPYSCLRIDVLAGDVPKFVVRPMVAEWHQRQWNKYEMEPFVVGR
>NZ_AP018255.1|WP_096691340.1|8369258_8370215_-|YegS/Rv2252/BmrU-family-lipid-kinase
MNRSACLIFNPVAGQGNPEAELTQIRSILEPEISLDIQVTTKEVGADKLAVEAVKRGVNTIIASGGDGTLSAAVEAVIGTDVKFGIISRGTANAFANALGIPDTIPGACEVILQGLTRTIDAAYCNGHPMVLLAGIGFEAEAVEAADREAKNRLGVMAYLLAGLKELRELEYFDVEIETEDKIVKTTAAAVTVANAAPPTSVLAQGSGGIVVDDGLLDLTIVAPANKAAAIATAIHLFQSASSGSGAERDDIGYMRAKQFKITTNPPQKVVVDGEVMEAGPVEVKCLPKAIQIFVPTVDEPEPVEKLEGLPNLVIEEK

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Crispr_ID: NZ_AP018255_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_33

9147454-9147558

Unclear

A:N

Consensus_repeat	Method
GTTACCAGACCCAGAATTTTCAGGGTCTGGTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_33

>merge|NZ_AP018255|33|9147454-9147558|CRISPRCasFinder
GTTACCAGACCCAGAATTTTCAGGGTCTGGTGACTTACATCAGAACTTTATCCAACGGAGGAAATTTCCAGGTTACCAGACCCAGAATTTTTCAGGGTCTGGTGA

>NZ_AP018255|33|32|9147454-9147558|CRISPRCasFinder
GTTACCAGACCCAGAATTTTCAGGGTCTGGTGAC	TTACATCAGAACTTTATCCAACGGAGGAAATTTCCAG
GTTACCAGACCCAGAATTTTTCAGGGTCTGGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096729162.1\|9141316_9141625_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691930.1\|9144017_9145292_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018255.1\|WP_096691928.1\|9142793_9143405_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238734
NZ_AP018255.1\|WP_096691935.1\|9151635_9153681_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_AP018255.1\|WP_096691924.1\|9137154_9137460_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691937.1\|9155475_9156858_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|381147
NZ_AP018255.1\|WP_096691939.1\|9161186_9162695_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375164
NZ_AP018255.1\|WP_096694477.1\|9166820_9167414_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018255.1\|WP_096691934.1\|9150087_9151293_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226984
NZ_AP018255.1\|WP_096691931.1\|9145383_9146502_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691940.1\|9162738_9166167_-\|response-regulator	unknown	unknown	gnl\|CDD\|143636
NZ_AP018255.1\|WP_096691932.1\|9147116_9147395_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275325
NZ_AP018255.1\|WP_096691936.1\|9153899_9154958_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214621
NZ_AP018255.1\|WP_096691927.1\|9141831_9142506_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691925.1\|9137612_9141176_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096691923.1\|9136726_9137158_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227028
NZ_AP018255.1\|WP_096691929.1\|9143671_9143902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691933.1\|9148139_9149129_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694476.1\|9159484_9160735_+\|cytosine-deaminase	unknown	unknown	gnl\|CDD\|181713
NZ_AP018255.1\|WP_096691938.1\|9156906_9159255_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096691930.1\|9144017_9145292_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.9062e-05
NZ_AP018255.1\|WP_096691928.1\|9142793_9143405_+\|VWA-domain-containing-protein	gnl\|CDD\|238734	cd01457, vWA_ORF176_type, VWA ORF176 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. The members of this subgroup are Eubacterial in origin and have a conserved MIDAS motif. Not much is known about the biochemistry of these.	6.14484e-84
NZ_AP018255.1\|WP_096691935.1\|9151635_9153681_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_AP018255.1\|WP_096691938.1\|9156906_9159255_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	8.22863e-73
NZ_AP018255.1\|WP_096691939.1\|9161186_9162695_-\|hypothetical-protein	gnl\|CDD\|375164	pfam17380, DUF5401, Family of unknown function (DUF5401). This is a family of unknown function found in Chromadorea.	6.19225e-10
NZ_AP018255.1\|WP_096691934.1\|9150087_9151293_-\|AAA-family-ATPase	gnl\|CDD\|226984	COG4637, COG4637, Predicted ATPase [General function prediction only].	1.2195e-26
NZ_AP018255.1\|WP_096691940.1\|9162738_9166167_-\|response-regulator	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	9.468e-55
NZ_AP018255.1\|WP_096691932.1\|9147116_9147395_+\|hypothetical-protein	gnl\|CDD\|275325	TIGR04532, polyketide_synthase, iterative type I PKS product template domain. Sequences found by this model are the so-called product template (PT) domain of various fungal iterative type I polyketide synthases. This domain resembles pfam14765, designated polyketide synthase dehydratase by Pfam, but members of that family are primarily bacterial, where type I PKS are predominantly modular, not iterative. The dehydratase active site residues well-conserved in pfam14765 (His in the first hot dog domain, Asp in the second hot dog domain) seem well conserved in this family also.	0.00706722
NZ_AP018255.1\|WP_096691937.1\|9155475_9156858_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.45732e-51
NZ_AP018255.1\|WP_096691925.1\|9137612_9141176_-\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	2.26244e-80
NZ_AP018255.1\|WP_096691923.1\|9136726_9137158_+\|hypothetical-protein	gnl\|CDD\|227028	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown].	2.60737e-48
NZ_AP018255.1\|WP_096691936.1\|9153899_9154958_-\|VWA-domain-containing-protein	gnl\|CDD\|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	2.171e-08
NZ_AP018255.1\|WP_096694477.1\|9166820_9167414_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.6875e-15
NZ_AP018255.1\|WP_096694476.1\|9159484_9160735_+\|cytosine-deaminase	gnl\|CDD\|181713	PRK09230, PRK09230, cytosine deaminase; Provisional.	0

>NZ_AP018255.1|WP_096691932.1|9147116_9147395_+|hypothetical-protein
MNHIDSDNINAGQTITYNLSFRAGITYKIYVQNALPGVDLDVYVLDGNRKVLAGDNSIASDAACTFTPGWSGEYTIAVTCEKGSTSYHLYVG
>NZ_AP018255.1|WP_096691931.1|9145383_9146502_-|hypothetical-protein
MGFVCHPSWLWVFGFIITCLFYGWVFTWADIECSFKHLKDARNDILDGNYLIHPVDSSVYESIKEFCGIGVYQKMYRMLPLFVKNVMEKSPLYDNLSKEPLLILSVEHKDGKSLTACKAYTNLLGPSLVFLNRRPEEMDAFFRFLLLHELEHVNRDGAEQLSQMHARPIALSFAVILLSFLATAWWHWLIIITYVLLNIVTSIRAKERREAIADNGALRKLSNSEEQEEAIEYFIELNQDLSELPEPQIDMEAIKKRFEILTMLMDQGKLSNQDKRDYIKEWMYRLGYFKLYQDCLKNHKKLPYLDWIPLEDRLFALPFNLFFLYLGRITLSPPIIPFVLMFSSLFLYALHNKRLNQFLEISNEVESRVVKT
>NZ_AP018255.1|WP_096691930.1|9144017_9145292_+|CHAT-domain-containing-protein
MINNSSVRKILILSANPLKTSRLRLDNEVREIDQGLNRAKHREQYELVQKWAVRTDDIRRALLDTEPQFVHFCGHGYGENGLAFEAEDGKVKLVSTNALAGLFELCQDHVKCVILNACYSEVQAEAISQHIDYVVGMKQSIGDEAAIKFAIGFYDAIGAGRSVEDAYKFGCNAIELETIPEHLTPILKKRANGISMNCKKQITFVLSGTLDSLERSKLEAIVAHLRIVARDAYLTIVDVQEGSIKLVLEGSQEGLERLETLFKSGKISEVLGISVEDVYFVTSENAHAREDTKSEGNNEIDANLKELVKSILGQVWRVQYRVLGDASVDKLYDAIQGGRSLDDLLSFAAGGSAFDMRSAWELLYQAVGLTVNVLALYKIWKQEHNRPPSKEELSQKAREAGIYDSYERAVLKKLDALIEEVTKQ
>NZ_AP018255.1|WP_096691929.1|9143671_9143902_+|hypothetical-protein
MDEEKIDQLLAKLERRASNSQDIVLPGSEPLLTTDESFLKEIRKEAALNQIAGTKTLKGQLLWIWGFLRGQGHKDT
>NZ_AP018255.1|WP_096691928.1|9142793_9143405_+|VWA-domain-containing-protein
MLENRDYTLIIDKSGSMSTKDQAGGRSRWDVMQESTLALASKCEKFDPDGITIYTFSTRFKRYENVTANKVNQIFEENEPLGRTEMADVLRDAFQNYFHRRELGQIKPNGETMLVVTDGQPDNRKSVITTIVEATQRMDKDEELAISFIQIGNDSEATAFLKLLDDQLENVGAKFDIVDTITIQEIEEEDLSLKEVLLKAIQD
>NZ_AP018255.1|WP_096691927.1|9141831_9142506_+|hypothetical-protein
MTSVSRYTSWERFMADIVDTADSTVNLKELFDLTSHAIVMIILKIIISSWVIFNAIVLLLSLAFPSFLIALGSFTLTPMGIATIGIFGVSMAATMKLLYQNRQLPIAIKKVGDKNKDKYDFIREKYAYERFTLVEQIDSLMFKSVKELISLAENEAEALKAKAIASTFEKIYLAYTDPEVDDVIECVTDIGKAVLEVEKENLEESAEQKIKQLLSERLKRIQSK
>NZ_AP018255.1|WP_096729162.1|9141316_9141625_+|hypothetical-protein
MRKYLLGSILMISSLFTFTNTANANSVQDEINRTNQLIGEYEQFERKVVNPEVQKYQRYLNRLYMACMNGNRNACNLYTIKIQQQNERLERATQIIRNRRRY
>NZ_AP018255.1|WP_096691925.1|9137612_9141176_-|hypothetical-protein
MRSLKASPLGLKKIKEARETEGSAIDNPKWLEEASNLIPPVKNGKNVLPATVSIGTWKRFLQGTPVKPLYFKAFCQVLELDWEEVVDIKDEVKGGKDEDKSSPTKYDWDSAPDVSIFYDRSIERNQLKQWLINDKCRLVTILAMGGVGKTALAVKLAQEVSEEFDYIIWRSLREAPTVEKIIADVVKFLSLQQEIELPQSLGEKITRLIHYFNTSRCLLILDNGESILQGGSSTGCYREGYEGYGELFRRVGECQHQSCLLLTSREQFQEMRPLAGESLPVRVWELEGLQSATEILTTRGISGLASDIEELIELYHGNPLALQIVPATIKKLFNGNIRAFLDSGTIIFDDIDDLLTQQFQRLSKPEQSLMYWLAINRQPVLQSDLFEDVLGLSQRQILSSLNSLLGRCLIQSTHDSFTLQNVVMEYVSEVFIDKVINELECCELDLLRTHAIIKASAPDYIRENQTQVLLKPVVGYLCKNHTKRVIEHKFRIIVEKLREKELQVPVGYAGGNLINLLIQLQVNLNGYDFSRLPISQAYLQGVELSQVNFNDCSFNKTVFSQSLGSIFSVTFSPDQKLLATGGMDGQIRLWNVADSTQILAWQAHDDWIRCVAFSSDGKLIASCGNDRAVRIWDSESAKCLKIFRGHTDWVWSVYFVLGKRLVVSASSDRTAKVWSLDLEVCIYTFHEPDREVWSFAFSNNGKTLATGGASSIRLWNVWTNKCLKTFDENSTRVRTLAFSPDGKTLVGSSDNQSIKAWDVKSGKCLLRVKTAPTGAIWAVKFSQSGKTVISCGTDKIQLWNLENGEPLRTFHEPHHRIRSLAYSPDQKMIAVGSDDQLVRLWDTQTGEAIKTFQGYSNRIWSVAVNPVPQQDIICLASGSDDGNIRLWNAATGECYQTLSGHQGRIRHVSFSPDGALLASASHDRTIKLWDVSTGTCLKTWRGHTDWVWSVIFQNNHTLISASDDHTIRLWDTHTNQSQILENLETEWMWAIALSPHTETLATAGTGETINFWDIHTRKCLTSLKGHTHRLRAITFNENGKLIASSSDDFSIRLWNVETQQCLQLFWGHTGEIRALTFIPASDNTPSILISASDDATIRLWDTKTGCFKVLTGHQNRIWSLCYSEQLDILFSCGEDETIKLWDIRALNCIKTLRIPKPYEGMNINGVSGLTDATLLSLRVLGAVSGTA
>NZ_AP018255.1|WP_096691924.1|9137154_9137460_+|transcriptional-regulator
MKTKPFSELRNRMAPERRAKNATRAKIALLYLTLVELQNSLGLLQENSEDYDAVLPDILMNENQQEIDISTLSEYIKALGGSLKIVANFREKEIVLAQFDD
>NZ_AP018255.1|WP_096691923.1|9136726_9137158_+|hypothetical-protein
MYWLKRNNTTKRQQNVISKKDIYYTVYEVEYTDEFEQWWLTLDLYTQDSIDIVVDLLIERGPNLSFPYSFGIKSSRHQHMRELRVQCRGEPYRILYAFDPRRVAVLLLGGNKVGNDRWYEENVAKADKLYDELLEELKKEGYI
>NZ_AP018255.1|WP_096691933.1|9148139_9149129_+|hypothetical-protein
MAQYKHDRFFKFYIQSLYKTKGDTLQNIQVHNDEDLEIDLMFIVQENLGWQQENLGLFDRLMQEHPTIIIEHYSSYLEETDINKSITRKNLYWTQKQKELVENAKTKQELTASGRLSKQAKKQIENQNPFTWILTVNCSEKLLNLCNAQPANELGAGVYRLPQILRMGIVIIEQLIDSPDTIWLKMLGDKESAKLAFQSIKQLSPNRREKNDIISACIKYCVYLRDIPTDNLTPEDKDFMRTMAEIDAWYEAEINNAKLEGKLEGKLEGKVESAITIIRVKFGDEILTPQIVSQLQKLNAKQLDDFMIGMFNWQQQEEMSEWLFGSEKV
>NZ_AP018255.1|WP_096691934.1|9150087_9151293_-|AAA-family-ATPase
MNIMLKTFQVKNFKAICDSKTISFTPLTVFIGNNGSGKSSIIEALSTYQMIVRDGLDKAMNYWGGFEHIRNQAVSHITEKSGIERSYETNPVDFKICWEDYYSEMAVTIDSSKDELFIQKETLEILFNKSKTVFTRTDTGEFSIKGKQNKNLDITEKYKFQGKCLDGQSIISTFTVRENFQEYDIFTNILNWQFLNLNPYSMVSPNPRKLTNKNISLASDGSNLAEYLLSIYRLDSNVFDGIVETLQYIVPYARDLQANVTSELERNVYLQLTENNFKLPTWLFSTGTLRILALLAVLRHPQPAPLIVIEEIENGLDPRSIHLIVDEIRNLVETGRSKVIITTHSPYLLDLLLLSQIILVERDENGQPVFSRPAEQESLQEWSKKFGPGKLYTMNRLSQKG
>NZ_AP018255.1|WP_096691935.1|9151635_9153681_-|NAD-dependent-DNA-ligase-LigA
MEAISEVKTRVIELRQLVQKASYAYYVLDNPIMDDAVYDRLYRELQDIEAKHPELVTPDSPTQRVGERPATQFTTVRHNVPLYSLENAFNVDELKNWDARWKRQLSPLNDVGYVCELKIDGNALALTYENGILTRGATRGDGVTGEDITQNVRTIRSIPLRLNAEAFNGAIPERVEVRGEAFLPLNIFKQINSERQKAGESVFANPRNATAGTLRQLNPKIVDKRQLDFFAYTLHIPGLDDTSIASTQWGALELLQKMGFKVNPKMKLCASLQEVAEYYEYWDTERLNLPYMTDGVVVKLDSFKLQEQLGFTQKFPRWAVALKYAAEEAPTIVENISVNVGRTGALTPLAEMRPVQLAGTTVSRATLHNGDRIAQLDIRIGDTVIVRKAGEIIPEVLRVLKELRPDGTKAFIMPSNCPVCSQPVVREKDEAVTRCVNASCQAILKGSIEHWVSRDALDIRGMGEKLVHQLVDKGVVHSVADLYDLTPDKLCALERMGKKSAEKIVEAITQSKNQPWSRVLYGLGIRHVGNVTAQTLTEKFPTVEQIAEASRTAYEGIYGIGAEIADSIYQWFRIPSNQTLIERLKIAGLQLETSEAPTDSSSENEKFVGKTFVITGTLPILKRDEAKALIQKAGGKVTDSVSKKTDYLVVGEEAGSKLAKAESLGVTTLSEAQLLEMLATD
>NZ_AP018255.1|WP_096691936.1|9153899_9154958_-|VWA-domain-containing-protein
MMSSIEVVFSFDTTGSMYPCLTQVRRRIKETVTRLMNEIPLIKIGIIAHGDYCDAGSTYVTKYFNLSSDIDAICNFVQNVEPTGGGDAPECYELVLHEAQSLAWSDSASKSLVLIGDDIPHAPAYNPQKLNWRQEIKKLADKSITVYGVQALNRSHATPFYRELAEQSGGFHVNLDQFSYITDLFLAVCYQQSSNEQLQAYEQEVVAQGRMSRGLNRIFNSMMNREETTMFQAADLRAVSPGRFQVLDIDDNVSIKGFVLENGLNFKVGRGFYEFTKTETIQGYKEIILMERATGDLFEGQAAREMLGLPEGSTARIKPNNLEKYMVFVQSTSANRKLIGKTKFLYEVEDWK
>NZ_AP018255.1|WP_096691937.1|9155475_9156858_-|hybrid-sensor-histidine-kinase/response-regulator
MVNDKLQNSNIRPVETILVIDDSPTNLEVLYTTLADAGYEVLVEMDSLEGIEQAKNNPPDLILLDIMMPKVNGFEACSKLQSNPVTKDIPIIFMTALSDTVEKVKGFQMGAVDYITKPFQQEEVIARINVQLKLRRLNLELDQQKQKLEERVAERTAELSEALEELQKTQLQLVQTEKISSLGQMVAGVAHEVNNPIGFISTNLYHASQYARDLINLLQLYRQKFPQPGTEIEEIIEAVDLDHISQDLPKLISSMKLGSDRIRGIMQSMRTYSRADGKEKKAVDIHEGIETTLMILQHRLKPQTFRPAIHVVKEYGNLPLIECYPGQLNQVFMNLIANAIDAIDESVQDKNWEGDKSKIDKYLTPENVLTVPLICICTTADKENVTIQIGDNGKGMDLSVRDQIFQAFYTTKPEGKGTGLGLSISYHIITEKHGGTLECITSPGKGTEFIIQLPFYTKSN
>NZ_AP018255.1|WP_096691938.1|9156906_9159255_-|response-regulator
MNHHANENQKNIRQQSFVAILKWLLEFLNQNNRLTIRRKIQFGYIIAVLIAMFASLAPIAIGDYFHSQVNDQRLRIRRERKLLSDLRLQTLSLLTVTSFPNSLQKPKSFQQAKSTALTRITQSRQLITELDRKKEKSSNQMFKHLFDKYKEHYIDYLESLENVLNKTETRLLERQILRVQESFSDVYNSKDTEETQEFVQQLTNVIETTEQHEDKAENDLSRSQLIRMIIIVISTNIALLLTYLFIRSLSHEISSPITSVIDITQRASKQAKTKSNFDLKLPVTKDYDTSKLVNYVNELVNQLQTLIEVQKKTELSLETANQAKSKFLASMSHELRTPLNGILGYAQILANSHNLTEEQKHGIKTIYECGFHLLNLINDILDLSKIESRKMELQLVDFHLPSFLQGVVEICRIKAEQKGIDFIYEASNLPVGISADKKRLRQVLINLLTNAIKFTDSGCVKLQVKFSNSTKVNSVKINFTVVDTGVGMKPEQMEMIFSPFEQVMSNERQHEGTGLGLTISQKIIEMMGGNIQVKSQVGVGSLFEFELECRIAEDWTESSTITSRGKIIGYSGNEKKILIVDDSWENRSLFISLLEPLGFVVIEASNGKEGIDRANQHNPDLIISDITMPIMNGWEMLTKMRQSELFQDIVIIIASPNVYEIDRQKTLVAGADGFLTRPIQPEELYNMLTKHLKINWTYAAPPVESSEAVTVFTSEMVIPPVSDLTMLLEYARKGQIKGIKQELDKIARMDEKYHIFVRQLNKYAKNLNIQKIRNFIQEYIRN
>NZ_AP018255.1|WP_096694476.1|9159484_9160735_+|cytosine-deaminase
MSYDLLLRQAKLVTVPDSQKVLDVGIKDGLVVEIASSIDGDGLLELNVDGKLVSPPFVESHIHLDSALTAGEPRWNQSGTLFEGIQIWSERKQNLSLEDIKTRAIETLKQQAEYGILFVRTHADVSEPSLIALQGLLEARDAVKDWITVQVVAFPQDGIYSSPLNEALLEKALQMGADVVGGIPHYELTREYGVKSVERVFELAQQYDRLIDIHCDEVDDEQSRFLEVVAACAARTGTGKRVTASHTTAFGSYNNAYAFKLMGFLQRAQINFIANPLINITLQGRADTYPKRRGVTRVKELWQNGLNVSFGHDCIQDPWYSLGTGNMLDVAHMGVHVCQMTGIPEINACYEMVTVNGAKTLHVEDIYGVEVGKPASLIVLDTDNYYDAVRRRSKPRYVISQGKLLTQTTPEATKWL
>NZ_AP018255.1|WP_096691939.1|9161186_9162695_-|hypothetical-protein
MPESVADKTPMPITIERRHIDPPGLWIAIVIGSVALHSLLLWLMLSSKLNIVGRSSRAGARPLQVVEVVPRATIRTKPRIIAQKPKLQSTKPIQVKSTPVQPPQKQVSQPGTIAFTNKVTIKKPVNKSPLDKKTVLTPPTPKIEPKKLNPKPKPDPKLAEIRRLQQLAEIRRLQQEAERRRLSKLAEQQRQKEIAEIRRLQQLTEQQRQQQEAEIRLEQEAERQRQQKLTEQQRQKEIASQLRQQEAERQLQQKLTEQRQKEIAEQQRQQKLAEQLRQEEIDAERRKREVATNQLPVPLSTPIEVPGNAPAPPTETPTPTPTQTSTPKPIFTPTSTPTSQPKPTSIPATTTAGNSESQGGFWIASSLPVDDEAQNVLNNKGGVDQLVVPPRLIDTAKTPKKLPVLDEKDKKLLTKSQRCLVQLFINNKGEIDKPGEGASGIKATGSSETGDLCQRYAEQYFKLNKGNIRFEPGKDVDGIATPGYMLRYIEIKSAAPDKKNPS
>NZ_AP018255.1|WP_096691940.1|9162738_9166167_-|response-regulator
MKSQVNSKPKILVVDDEPDNLDLLYRTFYREYKVIKANSGPDALELLKSEGDISVIISDQRMPMMSGTEFLSLTATQYPDIIRIILTGYTDVEDLVEAINAGKVFKYVTKPWEAEELKAVVRQALDTHNVLKARTRELTRTLRQESLLNTVTNTIRSALDYRQILQTIVDTVGHMLEVDVCLLRPFLNGQLADESFIYQKAPFNADHLDDEQNLSILRETVWETRSVQVINDVSNDERIQSQAVFHVRAQAFAVSNISSSLVVPLILRQELMAVLALHQCDSSRMWSDDEVKLVMMVADQAALALSQAYAYEQVRALAQREALINTITSAIRSSLNQQDIFAAITQQLGQALQVNGCVLSLWTEEDEYVQCVGLYESNDNHLDENIQHDILSQLPLSSAPIRENPILLHMLRTLEPVVVTDMNNCPPELSGFDLPLRGRSRSLIVVPLLADGKSIGSITLRQDNKARKWLNTEIELASSVAAQAAIAVQQSRLYQKTREQAERLLELDRQKTEFFQNISHEFRTPITLIQGPLESAVANKEGLSYAQSTIALRNSRRLLRLVNQLLDLQRLDAGRMQPTFRKCDLVEFTSQIVESFRTYCEKKGLQLVSKLSQCPAVYLDMEKFDKVLYNLLSNAMKFTPDGGTISVELVSNKQNCILQVRDTGIGIIKQQLPHLFERFRQAEGSENRSYEGSGLGLALVKELVELHGGEVTVDSVYGEGTTFTISLLAGTEHLPLDCVIDAPAELNVNRASVELADLELIEVDETPTGAHDFSEAHEVVPTGHTILVVDDNPDLRGYVSGILRANGYKVHTARNGADGFKNAQKFQPSLIVTDLMMPLVTGLEMIGMIRNDSKLKGTPVILLTAKIDEETRISGTELGADAYLAKPFNDRELLAEVRNLVALKENERRVLELNTYLTESVLQRFLPPALVQKAAAGDLVLDLRPEPRLITVLFSDIVGFTQLSNTLRSRKVAELLNEYLEAMTRAVFDNGGTVDKFMGDAILALFGAPEELTPNEQVRRSINTARAMLRSLDKLNARWRQQGIFDTDGRSEVQFRCGIHQGTAVVGMFGSSERADYTAIGPSVNIAARLQQAAKPGTILASAAVADYLQDEEIIKGSSLELKGVDETVLTFVVTPEVVANR
>NZ_AP018255.1|WP_096694477.1|9166820_9167414_+|GNAT-family-N-acetyltransferase
MIPWFSNSSHQQPKEVTTDLDYVQVRPACKDDLNDVSQIITESFHSPTGFWGWTLPLLRLGVYEDLRHRLATAAPHHLCLVAVDTTTDSNCLAGTVELGVRYSDAWAQRAKSFVYLSNLAVHPNYRRRGVASNLLAQCEKTASGWGFQDIYLHVLENNHTARQLYFKFGYRVHKVESSWNLFFFKSARQILLHKHLS

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Crispr_ID: NZ_AP018255_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_34

9201505-9201745

Unclear

A:N

Consensus_repeat	Method
GTGATCAACACCTTACGGTATCTA	CRISPRCasFinder
GTGATCAACACCTTACGGTATCTAA	PILER-CR

3 spacers

cas6,cas3,cas8b3,cas7,cas5,cas1,cas2

The CRISPR arrays of NZ_AP018255_34

>merge|NZ_AP018255|34|9201505-9201745|CRISPRCasFinder,PILER-CR
GTGGTCAATACCTTACGGTAATCAGAGGTTAAACACTAATTGACCGTCGCGACATATTAAACTGGCGCCATAGTGATCAATACCTTACGGTATCTAAGGTCAAAACATCTTCTTCTGCTGACACATCAACGATTTACTCTGCTGAGTGATCAACACCTTACGGTATCTAAGGTCAAAACACGTTCGAGGTTTACCCCACTCTTTATAACTTGCCTTGTGATCAACACCTTACGGTATCTAT

>NZ_AP018255|34|33|9201505-9201744|CRISPRCasFinder
GTGGTCAATACCTTACGGTAATCA	GAGGTTAAACACTAATTGACCGTCGCGACATATTAAACTGGCGCCATA
GTGATCAATACCTTACGGTATCTA	AGGTCAAAACATCTTCTTCTGCTGACACATCAACGATTTACTCTGCTGA
GTGATCAACACCTTACGGTATCTA	AGGTCAAAACACGTTCGAGGTTTACCCCACTCTTTATAACTTGCCTT
GTGATCAACACCTTACGGTATCTA

>NZ_AP018255|34|8|9201577-9201745|PILER-CR
GTGATCAATACCTTACGGTATCTAA	GGTCAAAACATCTTCTTCTGCTGACACATCAACGATTTACTCTGCTGA
GTGATCAACACCTTACGGTATCTAA	GGTCAAAACACGTTCGAGGTTTACCCCACTCTTTATAACTTGCCTT
GTGATCAACACCTTACGGTATCTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096691968.1\|9202224_9202938_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|370559
NZ_AP018255.1\|WP_096691959.1\|9185745_9186660_+\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_AP018255.1\|WP_096691969.1\|9202967_9205394_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|187770
NZ_AP018255.1\|WP_096691962.1\|9188809_9189313_+\|DUF1772-domain-containing-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691975.1\|9210934_9212599_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_AP018255.1\|WP_096691970.1\|9205384_9206953_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	cas8b3	cd09713_cas8b3_CAS-I-B	gnl\|CDD\|132524
NZ_AP018255.1\|WP_096691960.1\|9186862_9187351_+\|DUF1772-domain-containing-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694478.1\|9194121_9194313_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_AP018255.1\|WP_096691961.1\|9187888_9188272_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319947
NZ_AP018255.1\|WP_096691976.1\|9214489_9214765_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691965.1\|9194418_9195774_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_AP018255.1\|WP_096691963.1\|9192557_9193670_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_AP018255.1\|WP_096691964.1\|9193701_9194049_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_AP018255.1\|WP_096691974.1\|9210629_9210905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691967.1\|9199260_9199518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691971.1\|9207020_9207956_+\|DevR-family-CRISPR-associated-autoregulator	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_AP018255.1\|WP_096694479.1\|9212615_9212909_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_AP018255.1\|WP_096691972.1\|9207952_9208615_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	cas5	cd09688_cas5_CAS-I-B	gnl\|CDD\|187819
NZ_AP018255.1\|WP_096691966.1\|9195834_9198999_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_AP018255.1\|WP_096691973.1\|9209801_9210107_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096691959.1\|9185745_9186660_+\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	2.03156e-07
NZ_AP018255.1\|WP_096691968.1\|9202224_9202938_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|370559	pfam09559, Cas6, Cas6 Crispr. The Cas6 Crispr family of proteins averaging 140 residues are characterized by having a GhGxxxxxGhG motif, where h indicates a hydrophobic residue, at the C-terminus. The CRISPR-Cas system is possibly a mechanism of defense against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	5.30015e-78
NZ_AP018255.1\|WP_096691969.1\|9202967_9205394_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	3.56959e-42
NZ_AP018255.1\|WP_096691964.1\|9193701_9194049_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.82953e-05
NZ_AP018255.1\|WP_096691975.1\|9210934_9212599_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_AP018255.1\|WP_096694478.1\|9194121_9194313_-\|EamA-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	0.00194247
NZ_AP018255.1\|WP_096691961.1\|9187888_9188272_+\|glyoxalase	gnl\|CDD\|319947	cd08359, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	6.77435e-27
NZ_AP018255.1\|WP_096691965.1\|9194418_9195774_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.99638e-39
NZ_AP018255.1\|WP_096691963.1\|9192557_9193670_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.65995e-61
NZ_AP018255.1\|WP_096691970.1\|9205384_9206953_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	gnl\|CDD\|132524	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype. Members of this family are found among cas (CRISPR-Associated) genes close to CRISPR repeats in Leptospira interrogans (a spirochete), Myxococcus xanthus (a delta-proteobacterium), and Lyngbya sp. PCC 8106 (a cyanobacterium). It is found with other cas genes in Anabaena variabilis ATCC 29413. In Lyngbya sp., the protein is split into two tandem genes. This model corresponds to the N-terminal region or upstream gene; the C-terminal region is described by TIGR03486. CRISPR/cas systems are associated with prokaryotic acquired resistance to phage and other exogenous DNA.	6.86583e-94
NZ_AP018255.1\|WP_096691971.1\|9207020_9207956_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	7.6105e-37
NZ_AP018255.1\|WP_096694479.1\|9212615_9212909_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.38962e-18
NZ_AP018255.1\|WP_096691972.1\|9207952_9208615_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	gnl\|CDD\|187819	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.04458e-90
NZ_AP018255.1\|WP_096691966.1\|9195834_9198999_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0

>NZ_AP018255.1|WP_096691967.1|9199260_9199518_-|hypothetical-protein
MDVTKTIDAQVTLPIDLYDLYLAPRIFSNLIILSNCKFSLRSYPHRVVNHYASSKSPLEEDSKNFVIFVTQYHFLCSFYLEVQDK
>NZ_AP018255.1|WP_096691966.1|9195834_9198999_+|efflux-RND-transporter-permease-subunit
MKLIETAVRWRHGTFVLFCLLAVFGIMSLLNLPLELQPGGDRPEITISTTYPGAGPTEVEDLITRPIEERMEEVLGVKEISSTSRSGRSTINLEFNWGSDVDERLVDVLNRLQQVERLPEEAGESAVEIVSGASSPMMWIPLAPKPGFKSDPNRNRDLAEEVIIPRLRRVEGTGQFLVVGGQQREVEVRVDPKALAERNLAIGDVVRVLRENNRDIRGGPLILGRREYRVRTVSRSQDMEEIAGFVLRRDASGTVYLRDVAQIQMGRKPQDSALLFNDNPTVAIGIIRRIGANVPEVAKGVRAAITELEAQFDRANEGIKFIYNYDESEYINQSVTLVQENLLSGSLLAVVILLLFLGSMRTVAVVALTIPTTMITVFIAMSLLGRTLNIISLAALGFASGMVVDNAIVVVENAFTHMQQGKNPVKATIDGTKEVTGGLLGATLTNIAVFAPLVLVRGEIAQLFTDMAIAITAAALFSMLAAVTLVPMLSGLFLNQAEAVQVLEGGKYKGGNWLVRAVANTSAVFRVFQTRFENLLLATVGWSTGNGRLGRRLFILSIPIGLMVASIFLLPPADYLPEGNRNLLVWRAEPMPGTSIPEAIRQSEPVRAYLRKQPEVERVMYVDRPGAIRGITAILKPEFATSNGLAMMIERMRKASNNFAGYRFMVPNRISIFRDPGKEFEVDIVGADLNQLSEYERDIMGKLRPLPGVRNVRSNYVGGAAELQVIPNRERLAEVGIAEAEVGSMVEAALGGRLASEFIDGKEELDVSVELKDLFVQTPEQLRQLPLYTNGGQIQLSDVAEVKETVGPDVINHVDLERSITLTVTLNPEAPLGSIVERTQQDILAPIQAKLPAGYRIELSGSADRLGETVTQLATAFVLSIFIIYLLLVALYRSFLYPVVIMATVPMGMSGALLSLVIANSIPGVSVPLDMITALGFIILTGVVVNTSILIVERALQLLEEGMDYDKATYQATKDRLRAIFMSAITSVLGMLPLAVVPGQGAELYQGLGIVLTGGLLFSTILTPTVVPALMGLIYDFSGKRKVKKTRKKQLAPS
>NZ_AP018255.1|WP_096691965.1|9194418_9195774_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSPRESEIVTDTQAIVEDEDINDCIPTRKPWLGVLLAGLVLGAGAIGWRVLAPASKTSQPATAQTPQTPPPRPVETTTLTTGQGMRSYQLLGQVEATQQATIRAQTGGIIKQVMVQPGDRVTPGMTIAVLDDADQQLALSQALAQLAQQRSNMARLEVGTRPEIIAQRQAAVRSALAREQEARDNLQRNSNLVREGAISQRLLVEARANVDDTHGTRLAAEATLKEAKAGATREEMEAQRAQVGAAAAAVNQAKLALQRTKITSNSTGIVQERKVSVGDLVQTGGEIASLVAGDRLDVFLELPEELTGRVNAGTRVELTARALPNWRGNATITGVVPTANGASRRQRVRVQLNNVPRGLVSGMAVSGTLQSATNQPSFVVSRDVLTKRQDKWFVYTVAEGKAKQQEVQMVADMGEKVAIFHPLLRVGQEIVSRGGDMLTDGAAIRKVGSGV
>NZ_AP018255.1|WP_096694478.1|9194121_9194313_-|EamA-family-transporter
MISLYLLFFWSIQRVQAERTAIAATLEPVITGVIAWIWFGQTLTILLSHWRRTYHYCHYLDAI
>NZ_AP018255.1|WP_096691964.1|9193701_9194049_-|nuclear-transport-factor-2-family-protein
MTLQQFLYNLYEAFNEREIETIISLMHSNVKWANGMEGGFVYGQNQVREYWRKQFDIIQPQLEVLNVETDENNRAIITVHQIVRDIEGNLLFDKMVKQIFTIENGLITVFEIQDV
>NZ_AP018255.1|WP_096691963.1|9192557_9193670_-|serine-hydrolase
MKLTKLPILALLVVAIIIINPMLSAANLPSGSIVKAILQERIDKEKQSVGIVVGLINPQNSKIINYGKLSQSSSQAVNGDTIFEIGSVSKVFTTLLLADMVERKQLNLKDPISKLLPKSVTAPTRKGKEITLVDLATHTSGLPRLPNNLKPKDIENPYADYTIEQLYSFLSNYQLPRDIGTKYEYSNLGVGLLGHILSLKTGIDYEKLVVTRIAKPLQMNSTQIQISSEMQPRFATGHNQKLEAVKYWDIPTLAGAGALHSTANDLLKFVAANLGLIKSSLSSAMQLSQQVVYKNDISNLSMGLGWHIMKKDNREIIWHNGGTGGFHSFIGFDKNKRIGVVVLSNSINNIDDIGLHLLNKNIPLTKTRNF
>NZ_AP018255.1|WP_096691962.1|9188809_9189313_+|DUF1772-domain-containing-protein
MLYFLQITTTLLVAVGMALALAHALELPGKMRLNKEAYFAMQPIYYPGFTIGGGIGEFGGLISTIILLLFTPYLSAKFWLTLVALLGLIGMQAVYWLFTHPVNKFWLENEKLSDFSSGFFSFGANRSKLNNQTHPVEWTHLRNQWEYSHVARAGFSIISLIALLIRH
>NZ_AP018255.1|WP_096691961.1|9187888_9188272_+|glyoxalase
MQITSSAISLNVDDVTASANFVKQHFGFNEDMSADGFVSLSRQDAGFNLIFLQTGLKSFKPIHMRGHRADGLLIVFVVDNIDGEYERLQALCVTIITPIETESWGERYFQVKDPNGVIIQLVQWMTA
>NZ_AP018255.1|WP_096691960.1|9186862_9187351_+|DUF1772-domain-containing-protein
MTLTQIWRFLTIMLASFSLSLSMAHLLELPQRMKFDQQLWVRVTVFENVYRLFGSVGAFFEVSAIFMAIVLSYLVRKRSSTFYWTLGGTVLLTIALVSWIIFVAPMNAEFAKWLTNPVPLDWTRYRNQWEYAHAINAIIKIIGFSLLVLSVTIETPTRKRVH
>NZ_AP018255.1|WP_096691959.1|9185745_9186660_+|aminoglycoside-phosphotransferase-family-protein
MPNDKPNRSILTKRAVNASVAVASSYGINIDDPHILADAYSVRIHLRPAPIVARVSTITCVLRSPIDAWLAREISVSEFLLSKGAPVVPPSDLLPARPHHHDGLCMSFWRYVQPVSDEVPKSAVVGEMLGELHSVLRNYQSELPFLAPPLNDIPRGLDRLDSIGNIVNKSDLVILREAYDKLLLQVKNDSGDFLQPIHGDGHAHNLIPTMKGLLWNDFEDTCFGSIAWDLINLDDEGRATYPNAPDSKVLEPYHKLRQLHGIVWVYALLPEFPDWLEPVKVMLNDIRARLSIKDVTKKMTLENI
>NZ_AP018255.1|WP_096691968.1|9202224_9202938_+|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MKTICNARSLVFEGEFFVKPSFNVSASQSTGDDLAPFVELAYQVHGKYLPADHNYGLYAAFVHLVPELRQHDDVSILSIPGIGDKQGKILLTEQSYLKIRVPVTKIPLVYQLAGKRFSVGVHEIQIGIPTVSVLKPTSKLRARIVTIKGKEYTEKDAFLEAARRQLQSLNISGDISVPLDRQGLPSRKTIKVKRFTIVGFTTEITQLSDEDSLKLQQWGLGGKRHMGCGIFMPYRNL
>NZ_AP018255.1|WP_096691969.1|9202967_9205394_+|CRISPR-associated-helicase-Cas3'
MLMYTKFMSDFKGFKPLLAKSLPKKGSKDYSEQARGAAKYTGHISLVMQAADVLVEVLGEQILKQLGLIDVDLKYFAKTVKLGAYLHDWGKANQHFQEMVYWKSLDLQSKEPKVVNFKKVLKELAQTHSDRQMLRHEIISGILALQVPSIKEWLGKCEDVDLVAAVWAAMGHHLKTGVNKDDKPAEFIAEISDGTGGELNIYTHHQDFEAILKMGCKYLGLPEQLPELPKETWSKSELQTALNLLRDEFIKLESNLTWEQQKFIAAVKATVMAADLAGSALPLVEEDFKSWMQEVLSLTLSSEEIQRLVNQRLEGQPLRPFQKKIAQASRRVTLVKAGCGTGKTVGAYAWAEKWAVNRKLFFCYPTTGTASQGFIDYAEGTDIEAELMHSRADLDRELLFSGDSDESEGIDARLSAFTAWRKKLLVCTVDTVLGLIQNNRKPLYAWTAIAQSAFVFDEVHAYDARLFGALLEFIKTFRGAPILLMSASFTPGQLTKIREAMAELGEKIDEPIEGPEELEKLKRYEIRQLTEVSDSKDMPEVWESVLEALKNRQKVLWVTNSVQSCIDLYRQAKIQVQKLPVEANPLIYHSRFRYRDRVSKHKAVIDAFRTNEPVLAITTQVCEMSLDLSADLLVSAMAPFSALIQRLGRLNRRMSKPEEGTGLAIIYPWKNNKPYKATELNTGKDLLNRLTDKSAVSQHDLSEIAAELSSNIPESVKSIWLEGNWCAYPDFLRQPGYTVTVLLQDDLTSIKDAALLRSDKSFMREAQGWSVPVHIDKNLYDWRRIKFYPIAAPEDIYYSEETGAEPCK
>NZ_AP018255.1|WP_096691970.1|9205384_9206953_+|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1
MQIEFDLSNPSYTLLHRAGLAGLWISLNQLEKDKVELSHKIKWEKTNRKIMLSWEDNGEDKAVIEWLLNECFQLQDGLIALRGLDAKTMRKDALVIVHQGVLGTFLQHNSTHKSTGVVKETLQLDEGEIQIPITYKSLESYAYQDFASNLCDKKGKFLNKPISVAGWLNPGAVVRHVAFSTDTSFEEPPENAFLLLFAPVACYYYVLRSRLRDKRAQYALVIPEIRDLEKYALYRQNKHLRNAVYKDFYASGLGDAGLRFLTYETTANIVKNFGLSSCQVVTLGTVAWSTQQKTRTDLYIVKADSQVCKNYQVCKDYLQDKSVKGKENGFIACSFAREIIAENLAQNKPWYEGLADKVNSNELFERLTYERGGLHQMVQKVDWAEREKLFVQVCHEAIKYTYGKIYDNAQKRHEIANFDRETVRIRTGLARCKNANTFREFITDFWSRAGKIPTLQENWQDLMELVMQEKHWKKSRDLALLALASYKGKGVSNGEDEGESDADENTEVKESDDGIYGFDDLE
>NZ_AP018255.1|WP_096691971.1|9207020_9207956_+|DevR-family-CRISPR-associated-autoregulator
MTLHLFGNILTSYGTAANNRGENEGNITTLQKILWKGEVHTTVSAEAIRWALRYYWQTAGNGCKVNRRWDDDTNDNIWENQNFDDTIFIDDDVLGFMRAEGAKTEGSDKPEKPAKGKGKETAKGTTTAKRGVLEVTRAVSMTPYAGDLTFNSTSGKKGRTSLYGTEVHATSYQYGFALTPNRLKDQSRIIPVLEGLTSLGEVAGNHSRFLYDFSPDCTVLRWTHDFSPRLLYSFEEGEDGEITAPELIRRVEAKDLEAKELWVGGTIANSEHGEKLKQLGANVTPGIKAAVQNLKQKIAQDLQLPQLELTK
>NZ_AP018255.1|WP_096691972.1|9207952_9208615_+|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS
MTNSLAVNSLAIQIEVPIACFRQSHAREYAETYPVPPPSTVYGMLLSMIGETDRYKHCGVELAIALLSEPEKSTVIRTFRRFKKKDIHDPTNARPDYQELLTNTEFIVWVKPGTDAAKPNLLERLQHAFNHPEMIDRFGGLSLGESRDLVNSVQLWSGSFNKQPRCLVQDEDGTLALPYWVDHVGSQGTRWRRYLLREQTQTQPPEQAWTVIQPKYATNG
>NZ_AP018255.1|WP_096691973.1|9209801_9210107_-|hypothetical-protein
MTACSPAQRLTKSKVKTHVDLRKQQPKYLPAQRLATSKVKTLAHPRPAWLSQCPAQRLATSKVKTRLMAPVHKPILGKLLNAFRHLRLKHLSKINYYPKVK
>NZ_AP018255.1|WP_096691974.1|9210629_9210905_+|hypothetical-protein
MTFLGSIPILQKHKFVILSAAKNPSRIQVFKDATLRENCVNVPQHDIILANWDAPCFYLRYRKALSIMGILSKASQNTCAATSDVVRRKKL
>NZ_AP018255.1|WP_096691975.1|9210934_9212599_+|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1
METTRYLELNTKLETIRVSSLHALAYCPRLFYLEEVEELYTQDAAVFAGRRLHAELEKKEDEEWEELFLVSEELGLRGRVDALRTRDGETIPYEHKRGRCHRDEKKQPQAWESDKLQILAYACLLESALGVPIKEGRIRYHAENVLVRVPLDDVGRQAVRDAIQQARKLQQSTHRPPVADNERLCARCSLAPVCLPEEARLVHDREWQPIRLFPEDDTRRIIHILEPGTAVGRTGEQIKIARRGQPEEKIPAQQIGQLVLHSFSQISTQALYFCAEHGIGVHFISGGGRYLGSFDIRQGSIQRRVRQYAVLSNSETCLELAKRLVICRGQGQRKFLMRGTRGKAASEILQTTIKQMQILLKQVPSVKSIASLLGMEGRLAALYFGALPSLILPNVANELQFDGRNRRPPKDRFNTMLGFGYSLLLKDVMNAILTVGLEPALGLYHQPRTQAPPLALDLMEIFRVSLVDMPIVASINRGQWDVKEDFEARGNRVWLSETGKRKFVDMYERRKQETWKHPVTEYSLTYRRLLELEVRLLEKEWSGEGGLFAQLIVR
>NZ_AP018255.1|WP_096694479.1|9212615_9212909_+|CRISPR-associated-endonuclease-Cas2
MAELKNCYIVCYDIRCQKRWRKAYKLIEGYGERVQYSIFRCWLSQRTREKLRWELETILASEDNILFIRLSNRCVEDIPKYNRPGIWQNRDEPFLIV
>NZ_AP018255.1|WP_096691976.1|9214489_9214765_-|hypothetical-protein
MSTTNDSNLQQPTPEQIQYWKELDELDCIAFAGKPVSDSEFTEIVQSLLDGSNWVRHLNKVKAKKQQLLAKVAELEEIEREIEQKLTKSSN

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Crispr_ID: NZ_AP018255_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_35

9208975-9210597

Unclear

A:N

Consensus_repeat	Method
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	CRISPRCasFinder
GTGTTTTAACCTTAGATGTCGNNAAGGCGTTGAGCA	CRT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	CRISPRCasFinder

21 spacers

cas5,cas7,cas8b3,cas3,cas6,cas1,cas2

The CRISPR arrays of NZ_AP018255_35

>merge|NZ_AP018255|35|9208975-9210597|CRISPRCasFinder,CRT,CRISPRCasFinder
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATGAGTTATTTTTAAGTATTATCCAACCTGTTTTAGTTGGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATTCCAGAATGTAAGCGATATGATTGGGGCTGTGCGCGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATGGGCTAATGGGAATCATTGCAGTCATAACTGGACTGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATATAAAATAATCCCAAAGCTGGTATTTACAAGTAAGGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATAAAAAGCATCATTCCATCAAAAAGGTACAAAGAAGAGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATAATGATATTGAGCTTATAACGCACTTAGCAACGATTGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATATTATGTTTACATACTAGACTTTTCATTTGAACCTTGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATATTATTTTGATATCAAGTAGATAAGCCCCCAAGCTTGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATAAACAGATGCTTTAGCAAGACTACTACATGTTCCTAGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATCTCATCGAAGTCACCATCCTCAGAGAGTTGGCGCAGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATTATTGAAGCTTTGCCTGGTGGTAATAATGAAGAAGGGGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCATATTATTTAACCTTCGGGTAATAATTAATTTTACTAAGGTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAGCTTACCTAAAATAGGTTTATGTACTGGCGCCATCAAACGTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCAGGACATTGACTTAACCAAGCAGGTCTTGGATGCGCGAGTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCAGGAAGATATTTGGGTTGTTGTTTGCGAAGATCAACGTGTGTTTTTACCTTAGATTTCGTAAGGCGTTGAGCAGGCGAACACGCTGTCAATCGAAGACTACCCAGTCGTGGTGTTTTTACCTAAGATGTCCGTAAGGCGTTGAGCAGATGGATTGCAAGGACGAACTAAAAGCAACTGGATACCGTGTCTTAACCTAAGATGTCATGAGGCGTTGAGCAGAAATAAGCTTTACATTGCGGGCAGGTGATTTCTTGTTGTGTTTTAACCTAAGATGTTGTAAAGCGTTGAGCAGTCCCAATACTTCTGCCAAATGAAATTAAAAATATGGTGTTTTTACCTTAGATGTCGTAAGGCGTTGAGCATACGAACAATAGCAGGCGCCGTTGTTGCTCCAAGATATTGTTTTAACCTAAGATGTCGCAAGGCGTTGAGCATTGTTCTAGGGGCTTTATTGTTTGGGTTTAATTAATGTGTTTTTACCTTTAGATGCCGCAAGGTGTTGAGCATTTGATATTGCTTTAATAGTCATTATTTTAATTGATTGTGTCTTAACCCAAGATGTCGTGAGGCGTTGAGCAG

>NZ_AP018255|35|34|9208975-9210092|CRISPRCasFinder
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	GAGTTATTTTTAAGTATTATCCAACCTGTTTTAGTTG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	TCCAGAATGTAAGCGATATGATTGGGGCTGTGCGC
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	GGGCTAATGGGAATCATTGCAGTCATAACTGGACT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATAAAATAATCCCAAAGCTGGTATTTACAAGTAAG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	AAAAAGCATCATTCCATCAAAAAGGTACAAAGAAGA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	AATGATATTGAGCTTATAACGCACTTAGCAACGATT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATTATGTTTACATACTAGACTTTTCATTTGAACCTT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATTATTTTGATATCAAGTAGATAAGCCCCCAAGCTT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	AAACAGATGCTTTAGCAAGACTACTACATGTTCCTA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	CTCATCGAAGTCACCATCCTCAGAGAGTTGGCGCA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	TATTGAAGCTTTGCCTGGTGGTAATAATGAAGAAGGG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATTATTTAACCTTCGGGTAATAATTAATTTTACTAAG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAG	CTTACCTAAAATAGGTTTATGTACTGGCGCCATCAAAC
GTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCAG	GACATTGACTTAACCAAGCAGGTCTTGGATGCGCGA
GTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCAG	GAAGATATTTGGGTTGTTGTTTGCGAAGATCAACGT
GTGTTTTTACCTTAGATTTCGTAAGGCGTTGAGCAGGCGAACACGCTGTCAATCGAAGACTACCCAGTCGTGGTGTTTTTACCTAAGATGTCCGTAAGGCGTTGAGCAGATGGATTGCAAGGACGAACTAAAAGCAACTGGATACCGTGTCTTAACCTAAGATGTCATGAGGCGTTGAGCAG	AAATAAGCTTTACATTGCGGGCAGGTGATTTCTTGTT
GTGTTTTAACCTAAGATGTTGTAAAGCGTTGAGCAG	TCCCAATACTTCTGCCAAATGAAATTAAAAATATG
GTGTTTTTACCTTAGATGTCGTAAGGCGTTGAGCAT	ACGAACAATAGCAGGCGCCGTTGTTGCTCCAAGATA
TTGTTTTAACCTAAGATGTCGCAAGGCGTTGAGCAT	TGTTCTAGGGGCTTTATTGTTTGGGTTTAATTAATG
TGTTTTTACCTTTAGATGCCGCAAGGTGTTGAGCAT	TTGATATTGCTTTAATAGTCATTATTTTAATTGATT


>NZ_AP018255|35|8|9208975-9210524|CRT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TGAGTTATTTTTAAGTATTATCCAACCTGTTTTAGTTG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TTCCAGAATGTAAGCGATATGATTGGGGCTGTGCGC
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TGGGCTAATGGGAATCATTGCAGTCATAACTGGACT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TATAAAATAATCCCAAAGCTGGTATTTACAAGTAAG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TAAAAAGCATCATTCCATCAAAAAGGTACAAAGAAGA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TAATGATATTGAGCTTATAACGCACTTAGCAACGATT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TATTATGTTTACATACTAGACTTTTCATTTGAACCTT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TATTATTTTGATATCAAGTAGATAAGCCCCCAAGCTT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TAAACAGATGCTTTAGCAAGACTACTACATGTTCCTA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TCTCATCGAAGTCACCATCCTCAGAGAGTTGGCGCA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TTATTGAAGCTTTGCCTGGTGGTAATAATGAAGAAGGG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	TATTATTTAACCTTCGGGTAATAATTAATTTTACTAAG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCA	GCTTACCTAAAATAGGTTTATGTACTGGCGCCATCAAAC
GTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCA	GGACATTGACTTAACCAAGCAGGTCTTGGATGCGCGA
GTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCA	GGAAGATATTTGGGTTGTTGTTTGCGAAGATCAACGT
GTGTTTTTACCTTAGATTTCGTAAGGCGTTGAGCA	GGCGAACACGCTGTCAATCGAAGACTACCCAGTCGTGG
TGTTTTTACCTAAGATGTCCGTAAGGCGTTGAGCA	GATGGATTGCAAGGACGAACTAAAAGCAACTGGATACC
GTGTCTTAACCTAAGATGTCATGAGGCGTTGAGCA	GAAATAAGCTTTACATTGCGGGCAGGTGATTTCTTGTT
GTGTTTTAACCTAAGATGTTGTAAAGCGTTGAGCA	GTCCCAATACTTCTGCCAAATGAAATTAAAAATATG
GTGTTTTTACCTTAGATGTCGTAAGGCGTTGAGCA	TACGAACAATAGCAGGCGCCGTTGTTGCTCCAAGATA
TTGTTTTAACCTAAGATGTCGCAAGGCGTTGAGCA	TTGTTCTAGGGGCTTTATTGTTTGGGTTTAATTAATG
TGTTTTTACCTTTAGATGCCGCAAGGTGTTGAGCA

>NZ_AP018255|35|35|9210202-9210597|CRISPRCasFinder
	GAGTTATTTTTAAGTATTATCCAACCTGTTTTAGTTG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	TCCAGAATGTAAGCGATATGATTGGGGCTGTGCGC
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	GGGCTAATGGGAATCATTGCAGTCATAACTGGACT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATAAAATAATCCCAAAGCTGGTATTTACAAGTAAG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	AAAAAGCATCATTCCATCAAAAAGGTACAAAGAAGA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	AATGATATTGAGCTTATAACGCACTTAGCAACGATT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATTATGTTTACATACTAGACTTTTCATTTGAACCTT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATTATTTTGATATCAAGTAGATAAGCCCCCAAGCTT
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	AAACAGATGCTTTAGCAAGACTACTACATGTTCCTA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	CTCATCGAAGTCACCATCCTCAGAGAGTTGGCGCA
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	TATTGAAGCTTTGCCTGGTGGTAATAATGAAGAAGGG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAT	ATTATTTAACCTTCGGGTAATAATTAATTTTACTAAG
GTGTTTTAACCTTAGATGTCGAAAGGCGTTGAGCAG	CTTACCTAAAATAGGTTTATGTACTGGCGCCATCAAAC
GTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCAG	GACATTGACTTAACCAAGCAGGTCTTGGATGCGCGA
GTGTTTTTACCTTAGATGTCGCAAGGCGTTGAGCAG	GAAGATATTTGGGTTGTTGTTTGCGAAGATCAACGT
GTGTTTTTACCTTAGATTTCGTAAGGCGTTGAGCAGGCGAACACGCTGTCAATCGAAGACTACCCAGTCGTGGTGTTTTTACCTAAGATGTCCGTAAGGCGTTGAGCAGATGGATTGCAAGGACGAACTAAAAGCAACTGGATACCGTGTCTTAACCTAAGATGTCATGAGGCGTTGAGCAG	AAATAAGCTTTACATTGCGGGCAGGTGATTTCTTGTT
GTGTTTTAACCTAAGATGTTGTAAAGCGTTGAGCAG	TCCCAATACTTCTGCCAAATGAAATTAAAAATATG
GTGTTTTTACCTTAGATGTCGTAAGGCGTTGAGCAT	ACGAACAATAGCAGGCGCCGTTGTTGCTCCAAGATA
TTGTTTTAACCTAAGATGTCGCAAGGCGTTGAGCAT	TGTTCTAGGGGCTTTATTGTTTGGGTTTAATTAATG
TGTTTTTACCTTTAGATGCCGCAAGGTGTTGAGCAT	TTGATATTGCTTTAATAGTCATTATTTTAATTGATT
GTGTCTTAACCCAAGATGTCGTGAGGCGTTGAGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096691970.1\|9205384_9206953_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	cas8b3	cd09713_cas8b3_CAS-I-B	gnl\|CDD\|132524
NZ_AP018255.1\|WP_096691968.1\|9202224_9202938_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|370559
NZ_AP018255.1\|WP_096691969.1\|9202967_9205394_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|187770
NZ_AP018255.1\|WP_096691964.1\|9193701_9194049_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_AP018255.1\|WP_096691978.1\|9215379_9215565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691975.1\|9210934_9212599_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_AP018255.1\|WP_096691981.1\|9219447_9220629_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_AP018255.1\|WP_096694478.1\|9194121_9194313_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_AP018255.1\|WP_096691976.1\|9214489_9214765_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691965.1\|9194418_9195774_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_AP018255.1\|WP_096691972.1\|9207952_9208615_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	cas5	cd09688_cas5_CAS-I-B	gnl\|CDD\|187819
NZ_AP018255.1\|WP_096691974.1\|9210629_9210905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691967.1\|9199260_9199518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691971.1\|9207020_9207956_+\|DevR-family-CRISPR-associated-autoregulator	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_AP018255.1\|WP_096694479.1\|9212615_9212909_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_AP018255.1\|WP_096691979.1\|9215651_9216491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691977.1\|9214951_9215197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691980.1\|9216623_9218162_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694480.1\|9218532_9219336_+\|peptidase-S51	unknown	unknown	gnl\|CDD\|226693
NZ_AP018255.1\|WP_096691966.1\|9195834_9198999_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096691970.1\|9205384_9206953_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	gnl\|CDD\|132524	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype. Members of this family are found among cas (CRISPR-Associated) genes close to CRISPR repeats in Leptospira interrogans (a spirochete), Myxococcus xanthus (a delta-proteobacterium), and Lyngbya sp. PCC 8106 (a cyanobacterium). It is found with other cas genes in Anabaena variabilis ATCC 29413. In Lyngbya sp., the protein is split into two tandem genes. This model corresponds to the N-terminal region or upstream gene; the C-terminal region is described by TIGR03486. CRISPR/cas systems are associated with prokaryotic acquired resistance to phage and other exogenous DNA.	6.86583e-94
NZ_AP018255.1\|WP_096691968.1\|9202224_9202938_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|370559	pfam09559, Cas6, Cas6 Crispr. The Cas6 Crispr family of proteins averaging 140 residues are characterized by having a GhGxxxxxGhG motif, where h indicates a hydrophobic residue, at the C-terminus. The CRISPR-Cas system is possibly a mechanism of defense against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	5.30015e-78
NZ_AP018255.1\|WP_096691969.1\|9202967_9205394_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	3.56959e-42
NZ_AP018255.1\|WP_096691964.1\|9193701_9194049_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.82953e-05
NZ_AP018255.1\|WP_096691975.1\|9210934_9212599_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_AP018255.1\|WP_096691981.1\|9219447_9220629_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	0.00194372
NZ_AP018255.1\|WP_096694478.1\|9194121_9194313_-\|EamA-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	0.00194247
NZ_AP018255.1\|WP_096691965.1\|9194418_9195774_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.99638e-39
NZ_AP018255.1\|WP_096691972.1\|9207952_9208615_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	gnl\|CDD\|187819	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.04458e-90
NZ_AP018255.1\|WP_096691971.1\|9207020_9207956_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	7.6105e-37
NZ_AP018255.1\|WP_096694479.1\|9212615_9212909_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.38962e-18
NZ_AP018255.1\|WP_096694480.1\|9218532_9219336_+\|peptidase-S51	gnl\|CDD\|226693	COG4242, CphB, Cyanophycinase and related exopeptidases [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	5.03157e-72
NZ_AP018255.1\|WP_096691966.1\|9195834_9198999_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0

>NZ_AP018255.1|WP_096691972.1|9207952_9208615_+|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS
MTNSLAVNSLAIQIEVPIACFRQSHAREYAETYPVPPPSTVYGMLLSMIGETDRYKHCGVELAIALLSEPEKSTVIRTFRRFKKKDIHDPTNARPDYQELLTNTEFIVWVKPGTDAAKPNLLERLQHAFNHPEMIDRFGGLSLGESRDLVNSVQLWSGSFNKQPRCLVQDEDGTLALPYWVDHVGSQGTRWRRYLLREQTQTQPPEQAWTVIQPKYATNG
>NZ_AP018255.1|WP_096691971.1|9207020_9207956_+|DevR-family-CRISPR-associated-autoregulator
MTLHLFGNILTSYGTAANNRGENEGNITTLQKILWKGEVHTTVSAEAIRWALRYYWQTAGNGCKVNRRWDDDTNDNIWENQNFDDTIFIDDDVLGFMRAEGAKTEGSDKPEKPAKGKGKETAKGTTTAKRGVLEVTRAVSMTPYAGDLTFNSTSGKKGRTSLYGTEVHATSYQYGFALTPNRLKDQSRIIPVLEGLTSLGEVAGNHSRFLYDFSPDCTVLRWTHDFSPRLLYSFEEGEDGEITAPELIRRVEAKDLEAKELWVGGTIANSEHGEKLKQLGANVTPGIKAAVQNLKQKIAQDLQLPQLELTK
>NZ_AP018255.1|WP_096691970.1|9205384_9206953_+|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1
MQIEFDLSNPSYTLLHRAGLAGLWISLNQLEKDKVELSHKIKWEKTNRKIMLSWEDNGEDKAVIEWLLNECFQLQDGLIALRGLDAKTMRKDALVIVHQGVLGTFLQHNSTHKSTGVVKETLQLDEGEIQIPITYKSLESYAYQDFASNLCDKKGKFLNKPISVAGWLNPGAVVRHVAFSTDTSFEEPPENAFLLLFAPVACYYYVLRSRLRDKRAQYALVIPEIRDLEKYALYRQNKHLRNAVYKDFYASGLGDAGLRFLTYETTANIVKNFGLSSCQVVTLGTVAWSTQQKTRTDLYIVKADSQVCKNYQVCKDYLQDKSVKGKENGFIACSFAREIIAENLAQNKPWYEGLADKVNSNELFERLTYERGGLHQMVQKVDWAEREKLFVQVCHEAIKYTYGKIYDNAQKRHEIANFDRETVRIRTGLARCKNANTFREFITDFWSRAGKIPTLQENWQDLMELVMQEKHWKKSRDLALLALASYKGKGVSNGEDEGESDADENTEVKESDDGIYGFDDLE
>NZ_AP018255.1|WP_096691969.1|9202967_9205394_+|CRISPR-associated-helicase-Cas3'
MLMYTKFMSDFKGFKPLLAKSLPKKGSKDYSEQARGAAKYTGHISLVMQAADVLVEVLGEQILKQLGLIDVDLKYFAKTVKLGAYLHDWGKANQHFQEMVYWKSLDLQSKEPKVVNFKKVLKELAQTHSDRQMLRHEIISGILALQVPSIKEWLGKCEDVDLVAAVWAAMGHHLKTGVNKDDKPAEFIAEISDGTGGELNIYTHHQDFEAILKMGCKYLGLPEQLPELPKETWSKSELQTALNLLRDEFIKLESNLTWEQQKFIAAVKATVMAADLAGSALPLVEEDFKSWMQEVLSLTLSSEEIQRLVNQRLEGQPLRPFQKKIAQASRRVTLVKAGCGTGKTVGAYAWAEKWAVNRKLFFCYPTTGTASQGFIDYAEGTDIEAELMHSRADLDRELLFSGDSDESEGIDARLSAFTAWRKKLLVCTVDTVLGLIQNNRKPLYAWTAIAQSAFVFDEVHAYDARLFGALLEFIKTFRGAPILLMSASFTPGQLTKIREAMAELGEKIDEPIEGPEELEKLKRYEIRQLTEVSDSKDMPEVWESVLEALKNRQKVLWVTNSVQSCIDLYRQAKIQVQKLPVEANPLIYHSRFRYRDRVSKHKAVIDAFRTNEPVLAITTQVCEMSLDLSADLLVSAMAPFSALIQRLGRLNRRMSKPEEGTGLAIIYPWKNNKPYKATELNTGKDLLNRLTDKSAVSQHDLSEIAAELSSNIPESVKSIWLEGNWCAYPDFLRQPGYTVTVLLQDDLTSIKDAALLRSDKSFMREAQGWSVPVHIDKNLYDWRRIKFYPIAAPEDIYYSEETGAEPCK
>NZ_AP018255.1|WP_096691968.1|9202224_9202938_+|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MKTICNARSLVFEGEFFVKPSFNVSASQSTGDDLAPFVELAYQVHGKYLPADHNYGLYAAFVHLVPELRQHDDVSILSIPGIGDKQGKILLTEQSYLKIRVPVTKIPLVYQLAGKRFSVGVHEIQIGIPTVSVLKPTSKLRARIVTIKGKEYTEKDAFLEAARRQLQSLNISGDISVPLDRQGLPSRKTIKVKRFTIVGFTTEITQLSDEDSLKLQQWGLGGKRHMGCGIFMPYRNL
>NZ_AP018255.1|WP_096691967.1|9199260_9199518_-|hypothetical-protein
MDVTKTIDAQVTLPIDLYDLYLAPRIFSNLIILSNCKFSLRSYPHRVVNHYASSKSPLEEDSKNFVIFVTQYHFLCSFYLEVQDK
>NZ_AP018255.1|WP_096691966.1|9195834_9198999_+|efflux-RND-transporter-permease-subunit
MKLIETAVRWRHGTFVLFCLLAVFGIMSLLNLPLELQPGGDRPEITISTTYPGAGPTEVEDLITRPIEERMEEVLGVKEISSTSRSGRSTINLEFNWGSDVDERLVDVLNRLQQVERLPEEAGESAVEIVSGASSPMMWIPLAPKPGFKSDPNRNRDLAEEVIIPRLRRVEGTGQFLVVGGQQREVEVRVDPKALAERNLAIGDVVRVLRENNRDIRGGPLILGRREYRVRTVSRSQDMEEIAGFVLRRDASGTVYLRDVAQIQMGRKPQDSALLFNDNPTVAIGIIRRIGANVPEVAKGVRAAITELEAQFDRANEGIKFIYNYDESEYINQSVTLVQENLLSGSLLAVVILLLFLGSMRTVAVVALTIPTTMITVFIAMSLLGRTLNIISLAALGFASGMVVDNAIVVVENAFTHMQQGKNPVKATIDGTKEVTGGLLGATLTNIAVFAPLVLVRGEIAQLFTDMAIAITAAALFSMLAAVTLVPMLSGLFLNQAEAVQVLEGGKYKGGNWLVRAVANTSAVFRVFQTRFENLLLATVGWSTGNGRLGRRLFILSIPIGLMVASIFLLPPADYLPEGNRNLLVWRAEPMPGTSIPEAIRQSEPVRAYLRKQPEVERVMYVDRPGAIRGITAILKPEFATSNGLAMMIERMRKASNNFAGYRFMVPNRISIFRDPGKEFEVDIVGADLNQLSEYERDIMGKLRPLPGVRNVRSNYVGGAAELQVIPNRERLAEVGIAEAEVGSMVEAALGGRLASEFIDGKEELDVSVELKDLFVQTPEQLRQLPLYTNGGQIQLSDVAEVKETVGPDVINHVDLERSITLTVTLNPEAPLGSIVERTQQDILAPIQAKLPAGYRIELSGSADRLGETVTQLATAFVLSIFIIYLLLVALYRSFLYPVVIMATVPMGMSGALLSLVIANSIPGVSVPLDMITALGFIILTGVVVNTSILIVERALQLLEEGMDYDKATYQATKDRLRAIFMSAITSVLGMLPLAVVPGQGAELYQGLGIVLTGGLLFSTILTPTVVPALMGLIYDFSGKRKVKKTRKKQLAPS
>NZ_AP018255.1|WP_096691965.1|9194418_9195774_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSPRESEIVTDTQAIVEDEDINDCIPTRKPWLGVLLAGLVLGAGAIGWRVLAPASKTSQPATAQTPQTPPPRPVETTTLTTGQGMRSYQLLGQVEATQQATIRAQTGGIIKQVMVQPGDRVTPGMTIAVLDDADQQLALSQALAQLAQQRSNMARLEVGTRPEIIAQRQAAVRSALAREQEARDNLQRNSNLVREGAISQRLLVEARANVDDTHGTRLAAEATLKEAKAGATREEMEAQRAQVGAAAAAVNQAKLALQRTKITSNSTGIVQERKVSVGDLVQTGGEIASLVAGDRLDVFLELPEELTGRVNAGTRVELTARALPNWRGNATITGVVPTANGASRRQRVRVQLNNVPRGLVSGMAVSGTLQSATNQPSFVVSRDVLTKRQDKWFVYTVAEGKAKQQEVQMVADMGEKVAIFHPLLRVGQEIVSRGGDMLTDGAAIRKVGSGV
>NZ_AP018255.1|WP_096694478.1|9194121_9194313_-|EamA-family-transporter
MISLYLLFFWSIQRVQAERTAIAATLEPVITGVIAWIWFGQTLTILLSHWRRTYHYCHYLDAI
>NZ_AP018255.1|WP_096691964.1|9193701_9194049_-|nuclear-transport-factor-2-family-protein
MTLQQFLYNLYEAFNEREIETIISLMHSNVKWANGMEGGFVYGQNQVREYWRKQFDIIQPQLEVLNVETDENNRAIITVHQIVRDIEGNLLFDKMVKQIFTIENGLITVFEIQDV
>NZ_AP018255.1|WP_096691974.1|9210629_9210905_+|hypothetical-protein
MTFLGSIPILQKHKFVILSAAKNPSRIQVFKDATLRENCVNVPQHDIILANWDAPCFYLRYRKALSIMGILSKASQNTCAATSDVVRRKKL
>NZ_AP018255.1|WP_096691975.1|9210934_9212599_+|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1
METTRYLELNTKLETIRVSSLHALAYCPRLFYLEEVEELYTQDAAVFAGRRLHAELEKKEDEEWEELFLVSEELGLRGRVDALRTRDGETIPYEHKRGRCHRDEKKQPQAWESDKLQILAYACLLESALGVPIKEGRIRYHAENVLVRVPLDDVGRQAVRDAIQQARKLQQSTHRPPVADNERLCARCSLAPVCLPEEARLVHDREWQPIRLFPEDDTRRIIHILEPGTAVGRTGEQIKIARRGQPEEKIPAQQIGQLVLHSFSQISTQALYFCAEHGIGVHFISGGGRYLGSFDIRQGSIQRRVRQYAVLSNSETCLELAKRLVICRGQGQRKFLMRGTRGKAASEILQTTIKQMQILLKQVPSVKSIASLLGMEGRLAALYFGALPSLILPNVANELQFDGRNRRPPKDRFNTMLGFGYSLLLKDVMNAILTVGLEPALGLYHQPRTQAPPLALDLMEIFRVSLVDMPIVASINRGQWDVKEDFEARGNRVWLSETGKRKFVDMYERRKQETWKHPVTEYSLTYRRLLELEVRLLEKEWSGEGGLFAQLIVR
>NZ_AP018255.1|WP_096694479.1|9212615_9212909_+|CRISPR-associated-endonuclease-Cas2
MAELKNCYIVCYDIRCQKRWRKAYKLIEGYGERVQYSIFRCWLSQRTREKLRWELETILASEDNILFIRLSNRCVEDIPKYNRPGIWQNRDEPFLIV
>NZ_AP018255.1|WP_096691976.1|9214489_9214765_-|hypothetical-protein
MSTTNDSNLQQPTPEQIQYWKELDELDCIAFAGKPVSDSEFTEIVQSLLDGSNWVRHLNKVKAKKQQLLAKVAELEEIEREIEQKLTKSSN
>NZ_AP018255.1|WP_096691977.1|9214951_9215197_-|hypothetical-protein
MMTQSRYSSVDEQGTVLSDKASEPSRETVKHLVIGSPKAVKSTIYSLQVLGYAQVGDWSQLIPTANPGEVMSILSRNIAVQ
>NZ_AP018255.1|WP_096691978.1|9215379_9215565_+|hypothetical-protein
MPRPKRTEKDKYGESKKKYQIMLTSTASSELDTVSEELGITRSELLELVIRQGFLKQVKLE
>NZ_AP018255.1|WP_096691979.1|9215651_9216491_-|hypothetical-protein
MQRKVKFILLFVTSLIVISITSFALFLNTVAPMRANTPIEAVTIGFQTPTPVRFFPNTFESCTKDSNFTQCSVDVQKRPLEITLNYKQLERNQLPRCIASYAGQDYSCIVSSGGYAGGVRFLNSVVITSTLGLTSQQLQSLSKDNWFAQLNQTSWLQVSTILSGIFGILAAIIIWQYPNKCIQITASLVIGFNIFYLSVIQLYKIKPVSSILYSLNEPQIMLIAGLFAALGIGMILMLNWRRQNLIKIFALIGGVNVFHIFGLLVYSFLVSGGFVIADY
>NZ_AP018255.1|WP_096691980.1|9216623_9218162_-|hypothetical-protein
MLSITLAVTTLAFLIPISVVAKTATPNNPNKVWMLSSIAQQFAEAGQKQKASELITQALPLINNIPSNCDKPKPMATIAGNYARVGQNTQALQLLEQAIQVAKTAKGCNSTNDAVENLLDISNKYIDEGLYELALQSVRGFNDAPSSLYRVYGLSLIARDLAKSNKVDQINTLTTEILNAAQNIKDANQRAFALSRGAYELIEARLNTQALKLLAEAQKAIPAIKDVDGKPDTLLLIARAYNKLGQPTETIKLLEQATFATQKVSKISFRMHNLGAIAAEYAAVNQNNSANLLLAQALTTANKTKPTSERDNLLITVANYTAISGKYDQALKIASSIKNRQNQAAALSQIAGKVARQGKFDLALQIAQRQIGDAQYKAGALMEITRALVTAKQLDKAVEVAQSINGKYEKAGVLSEIALKYAENGNPEKAMKLVNIIDKLSDEGNDIDWMLPTVATSYAKAGNFDQAIKIANSIKIKEARVNALTKIASEYSEKGQKDKSLLLLAQALELAM
>NZ_AP018255.1|WP_096694480.1|9218532_9219336_+|peptidase-S51
MVNQARGCSRCSNKVDVVIIRANGGDAYNQPIYNMRGVDSVETLIINNRNHANNASIVEKVKNAEVIFFAGGDQCKYIRNFQNTKLEKAIESVSARGGAIGGTSAGAMIQSSFVYNACGRAVESRDALYDPYRNIEFTYNFLPWPNLRNTIIDTHFDTRDRMGRLMTFIARQLQDGKAKSVLGIGISEETSVVVDRNGNALVMGRGPAYFVLGNHQPEVCERGRYLTYRDFKIWRVNRGETFNLRNRPKRGYYLRSVERGRFNSNPY
>NZ_AP018255.1|WP_096691981.1|9219447_9220629_-|alpha/beta-hydrolase
MMTAASETWVTPTTDQIARTKAKIDASVQNIKANPSYRPGSAPFYGFHDAGKAVRGTVIIFHGFSAKPTQLSALSDYLYSNGFNYYQANLANHTLQPPDKFWCQVDLKPEILNPLREKVNKDQVLQDFIKSLPEDPTKYQRPPMLQMANLVSRLMLIEPRLMKIMAAAENDNDPNFSRYFTSNHMDYLTDARKRLSELDAMPAPIYVIGLSVGAAIALGLAADQPKRIVKVVAYTPLLKLYEPTVERYIELAGPLDMYEKSWHPGESFPVGALTAASRYGAYVREPQNIKALKNVPTWMVLTENEDAASIPTNEDFFSKIGGTDAGHRLFKYPASDLVPHPLAEPNVQSQGMTNRFWQSLYQETFRFLTTGEYDPSNMDTVEQDPNLPQVAPV

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Crispr_ID: NZ_AP018255_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_36

9213083-9214485

Unclear

A:N

Consensus_repeat	Method
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CRT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	PILER-CR
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CRISPRCasFinder

19 spacers

cas2,cas1,cas5,cas7,cas8b3,cas3,cas6

The CRISPR arrays of NZ_AP018255_36

>merge|NZ_AP018255|36|9213083-9214485|CRT,PILER-CR,CRISPRCasFinder
GTGCTGTAATAGCTTTTTGCACCAGGTGCTTGTAAAATCGTCTAGGGAACTGCGCCATACAAGGATTTTGGAAGGCGCTGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGATTAAACATTCAAACACTCAATTTAATAATGATTTAGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGAATTGTTCACGAAAATTAATGAACTATTTGAAGAAGGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGACTTGTTAGATATTCCCGTTAACGAAGCAGCGTAAGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGAATACTGCTCGCTTTTTAGATATTGACCAGCTTGCGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTGAGCAAGCAGTATTATTAAGCGGCGCCTTTGTATTTGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTTGTCGCATCTTTCTCACCCAATCTTGCTGTTAGTGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTTAGTACTATCGGTGCTAGTGTCGGTGTCGGTGTCGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTCAAGTCTAAGCGAACACCATACCGAAATCAAACATGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTAAAATCAAAGACATCGTATTAAATAATTATGTAGAGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGCGTAGTAATCCCAACTTGGGTCAGGTGTTGATATTGGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGATGTCGCGTAACCGCTCCACATGCGGCATCAAGCCGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTATTTGTTGCTGCATTGCTGGGTGTATTACTGGACTGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGGCGCAAATAGCCTCATCGAGCGTAAGGCAAGACCGTGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGCAAGAGGAACACAACAAGAATTTGAATTACAAAACGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGTCCAGCCATATATGGTCCAGTTCTTGGAGGGTTAAAGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGGCTAGAATCTGGATGGCTGCATAGAGAAGAATATGGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGAATGCACCGATTACGCTTACAACAAGTCAGAATAGTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAGGCTATGCGGAACGTGGGATGGATGGTTTTACTAATTGTGCTGTAACCTTAGATGCCTTCTGGCGTTGAGCAT

>NZ_AP018255|36|9|9213083-9214485|CRT
GTGCTGTAATAGCTTTTTGCACCAGGTGCTTGTAAA	ATCGTCTAGGGAACTGCGCCATACAAGGATTTTGGAAGGCGCT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ATTAAACATTCAAACACTCAATTTAATAATGATTTA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATTGTTCACGAAAATTAATGAACTATTTGAAGAAG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ACTTGTTAGATATTCCCGTTAACGAAGCAGCGTAA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATACTGCTCGCTTTTTAGATATTGACCAGCTTGC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TGAGCAAGCAGTATTATTAAGCGGCGCCTTTGTATTT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TTGTCGCATCTTTCTCACCCAATCTTGCTGTTAGT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TTAGTACTATCGGTGCTAGTGTCGGTGTCGGTGTC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TCAAGTCTAAGCGAACACCATACCGAAATCAAACAT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TAAAATCAAAGACATCGTATTAAATAATTATGTAGA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CGTAGTAATCCCAACTTGGGTCAGGTGTTGATATTG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ATGTCGCGTAACCGCTCCACATGCGGCATCAAGCC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TATTTGTTGCTGCATTGCTGGGTGTATTACTGGACT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCGCAAATAGCCTCATCGAGCGTAAGGCAAGACCGT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CAAGAGGAACACAACAAGAATTTGAATTACAAAAC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TCCAGCCATATATGGTCCAGTTCTTGGAGGGTTAAA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCTAGAATCTGGATGGCTGCATAGAGAAGAATATG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATGCACCGATTACGCTTACAACAAGTCAGAATA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCTATGCGGAACGTGGGATGGATGGTTTTACTAATT
GTGCTGTAACCTTAGATGCCTTCTGGCGTTGAGCAT

>NZ_AP018255|36|9|9213162-9214413|PILER-CR
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ATTAAACATTCAAACACTCAATTTAATAATGATTTA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATTGTTCACGAAAATTAATGAACTATTTGAAGAAG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ACTTGTTAGATATTCCCGTTAACGAAGCAGCGTAA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATACTGCTCGCTTTTTAGATATTGACCAGCTTGC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TGAGCAAGCAGTATTATTAAGCGGCGCCTTTGTATTT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TTGTCGCATCTTTCTCACCCAATCTTGCTGTTAGT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TTAGTACTATCGGTGCTAGTGTCGGTGTCGGTGTC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TCAAGTCTAAGCGAACACCATACCGAAATCAAACAT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TAAAATCAAAGACATCGTATTAAATAATTATGTAGA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CGTAGTAATCCCAACTTGGGTCAGGTGTTGATATTG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ATGTCGCGTAACCGCTCCACATGCGGCATCAAGCC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TATTTGTTGCTGCATTGCTGGGTGTATTACTGGACT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCGCAAATAGCCTCATCGAGCGTAAGGCAAGACCGT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CAAGAGGAACACAACAAGAATTTGAATTACAAAAC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TCCAGCCATATATGGTCCAGTTCTTGGAGGGTTAAA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCTAGAATCTGGATGGCTGCATAGAGAAGAATATG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATGCACCGATTACGCTTACAACAAGTCAGAATA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG

>NZ_AP018255|36|36|9213162-9214485|CRISPRCasFinder
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ATTAAACATTCAAACACTCAATTTAATAATGATTTA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATTGTTCACGAAAATTAATGAACTATTTGAAGAAG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ACTTGTTAGATATTCCCGTTAACGAAGCAGCGTAA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATACTGCTCGCTTTTTAGATATTGACCAGCTTGC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TGAGCAAGCAGTATTATTAAGCGGCGCCTTTGTATTT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TTGTCGCATCTTTCTCACCCAATCTTGCTGTTAGT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TTAGTACTATCGGTGCTAGTGTCGGTGTCGGTGTC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TCAAGTCTAAGCGAACACCATACCGAAATCAAACAT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TAAAATCAAAGACATCGTATTAAATAATTATGTAGA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CGTAGTAATCCCAACTTGGGTCAGGTGTTGATATTG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	ATGTCGCGTAACCGCTCCACATGCGGCATCAAGCC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TATTTGTTGCTGCATTGCTGGGTGTATTACTGGACT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCGCAAATAGCCTCATCGAGCGTAAGGCAAGACCGT
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	CAAGAGGAACACAACAAGAATTTGAATTACAAAAC
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	TCCAGCCATATATGGTCCAGTTCTTGGAGGGTTAAA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCTAGAATCTGGATGGCTGCATAGAGAAGAATATG
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	AATGCACCGATTACGCTTACAACAAGTCAGAATA
GTGCTGTAACCTTAGATGTCGTAAGGCGTTGAGCAG	GCTATGCGGAACGTGGGATGGATGGTTTTACTAATT
GTGCTGTAACCTTAGATGCCTTCTGGCGTTGAGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096691970.1\|9205384_9206953_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	cas8b3	cd09713_cas8b3_CAS-I-B	gnl\|CDD\|132524
NZ_AP018255.1\|WP_096691968.1\|9202224_9202938_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	cas6	cd09703_cas6_CAS-I:CAS-III	gnl\|CDD\|370559
NZ_AP018255.1\|WP_096691969.1\|9202967_9205394_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|187770
NZ_AP018255.1\|WP_096691978.1\|9215379_9215565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691975.1\|9210934_9212599_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|274899
NZ_AP018255.1\|WP_096691981.1\|9219447_9220629_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_AP018255.1\|WP_096691982.1\|9220774_9221074_+\|plasmid-stabilization-protein-ParE	unknown	unknown	gnl\|CDD\|224937
NZ_AP018255.1\|WP_096691976.1\|9214489_9214765_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691972.1\|9207952_9208615_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	cas5	cd09688_cas5_CAS-I-B	gnl\|CDD\|187819
NZ_AP018255.1\|WP_096691974.1\|9210629_9210905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691967.1\|9199260_9199518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691971.1\|9207020_9207956_+\|DevR-family-CRISPR-associated-autoregulator	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_AP018255.1\|WP_096694479.1\|9212615_9212909_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_AP018255.1\|WP_096691979.1\|9215651_9216491_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691977.1\|9214951_9215197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691980.1\|9216623_9218162_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691983.1\|9221070_9221313_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096691984.1\|9223314_9223713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694480.1\|9218532_9219336_+\|peptidase-S51	unknown	unknown	gnl\|CDD\|226693
NZ_AP018255.1\|WP_096691973.1\|9209801_9210107_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096691970.1\|9205384_9206953_+\|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1	gnl\|CDD\|132524	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype. Members of this family are found among cas (CRISPR-Associated) genes close to CRISPR repeats in Leptospira interrogans (a spirochete), Myxococcus xanthus (a delta-proteobacterium), and Lyngbya sp. PCC 8106 (a cyanobacterium). It is found with other cas genes in Anabaena variabilis ATCC 29413. In Lyngbya sp., the protein is split into two tandem genes. This model corresponds to the N-terminal region or upstream gene; the C-terminal region is described by TIGR03486. CRISPR/cas systems are associated with prokaryotic acquired resistance to phage and other exogenous DNA.	6.86583e-94
NZ_AP018255.1\|WP_096691968.1\|9202224_9202938_+\|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6	gnl\|CDD\|370559	pfam09559, Cas6, Cas6 Crispr. The Cas6 Crispr family of proteins averaging 140 residues are characterized by having a GhGxxxxxGhG motif, where h indicates a hydrophobic residue, at the C-terminus. The CRISPR-Cas system is possibly a mechanism of defense against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	5.30015e-78
NZ_AP018255.1\|WP_096691972.1\|9207952_9208615_+\|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS	gnl\|CDD\|187819	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	2.04458e-90
NZ_AP018255.1\|WP_096691982.1\|9220774_9221074_+\|plasmid-stabilization-protein-ParE	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	8.90031e-06
NZ_AP018255.1\|WP_096691971.1\|9207020_9207956_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	7.6105e-37
NZ_AP018255.1\|WP_096694479.1\|9212615_9212909_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	6.38962e-18
NZ_AP018255.1\|WP_096691975.1\|9210934_9212599_+\|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274899	TIGR03983, hypothetical_protein_LA3181, CRISPR-associated endonuclease Cas1, subtype MYXAN. Members of this protein are the Cas1 endonuclease, or Cas1 domain in Cas4/Cas1 fusion proteins, of the MYXAN subtype of CRISPR/Cas systems. These systems typically feature repeats and spacers each about 36 base pairs in length. Species with this type of CRISPR system include Myxococcus xanthus, Cyanothece sp., Leptospira interrogans, Sorangium cellulosum, Anabaena variabilis ATCC 29413, etc.	0
NZ_AP018255.1\|WP_096691981.1\|9219447_9220629_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	0.00194372
NZ_AP018255.1\|WP_096691969.1\|9202967_9205394_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	3.56959e-42
NZ_AP018255.1\|WP_096694480.1\|9218532_9219336_+\|peptidase-S51	gnl\|CDD\|226693	COG4242, CphB, Cyanophycinase and related exopeptidases [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	5.03157e-72

>NZ_AP018255.1|WP_096694479.1|9212615_9212909_+|CRISPR-associated-endonuclease-Cas2
MAELKNCYIVCYDIRCQKRWRKAYKLIEGYGERVQYSIFRCWLSQRTREKLRWELETILASEDNILFIRLSNRCVEDIPKYNRPGIWQNRDEPFLIV
>NZ_AP018255.1|WP_096691975.1|9210934_9212599_+|type-I-MYXAN-CRISPR-associated-endonuclease-Cas1
METTRYLELNTKLETIRVSSLHALAYCPRLFYLEEVEELYTQDAAVFAGRRLHAELEKKEDEEWEELFLVSEELGLRGRVDALRTRDGETIPYEHKRGRCHRDEKKQPQAWESDKLQILAYACLLESALGVPIKEGRIRYHAENVLVRVPLDDVGRQAVRDAIQQARKLQQSTHRPPVADNERLCARCSLAPVCLPEEARLVHDREWQPIRLFPEDDTRRIIHILEPGTAVGRTGEQIKIARRGQPEEKIPAQQIGQLVLHSFSQISTQALYFCAEHGIGVHFISGGGRYLGSFDIRQGSIQRRVRQYAVLSNSETCLELAKRLVICRGQGQRKFLMRGTRGKAASEILQTTIKQMQILLKQVPSVKSIASLLGMEGRLAALYFGALPSLILPNVANELQFDGRNRRPPKDRFNTMLGFGYSLLLKDVMNAILTVGLEPALGLYHQPRTQAPPLALDLMEIFRVSLVDMPIVASINRGQWDVKEDFEARGNRVWLSETGKRKFVDMYERRKQETWKHPVTEYSLTYRRLLELEVRLLEKEWSGEGGLFAQLIVR
>NZ_AP018255.1|WP_096691974.1|9210629_9210905_+|hypothetical-protein
MTFLGSIPILQKHKFVILSAAKNPSRIQVFKDATLRENCVNVPQHDIILANWDAPCFYLRYRKALSIMGILSKASQNTCAATSDVVRRKKL
>NZ_AP018255.1|WP_096691973.1|9209801_9210107_-|hypothetical-protein
MTACSPAQRLTKSKVKTHVDLRKQQPKYLPAQRLATSKVKTLAHPRPAWLSQCPAQRLATSKVKTRLMAPVHKPILGKLLNAFRHLRLKHLSKINYYPKVK
>NZ_AP018255.1|WP_096691972.1|9207952_9208615_+|type-I-MYXAN-CRISPR-associated-protein-Cas5/Cmx5/DevS
MTNSLAVNSLAIQIEVPIACFRQSHAREYAETYPVPPPSTVYGMLLSMIGETDRYKHCGVELAIALLSEPEKSTVIRTFRRFKKKDIHDPTNARPDYQELLTNTEFIVWVKPGTDAAKPNLLERLQHAFNHPEMIDRFGGLSLGESRDLVNSVQLWSGSFNKQPRCLVQDEDGTLALPYWVDHVGSQGTRWRRYLLREQTQTQPPEQAWTVIQPKYATNG
>NZ_AP018255.1|WP_096691971.1|9207020_9207956_+|DevR-family-CRISPR-associated-autoregulator
MTLHLFGNILTSYGTAANNRGENEGNITTLQKILWKGEVHTTVSAEAIRWALRYYWQTAGNGCKVNRRWDDDTNDNIWENQNFDDTIFIDDDVLGFMRAEGAKTEGSDKPEKPAKGKGKETAKGTTTAKRGVLEVTRAVSMTPYAGDLTFNSTSGKKGRTSLYGTEVHATSYQYGFALTPNRLKDQSRIIPVLEGLTSLGEVAGNHSRFLYDFSPDCTVLRWTHDFSPRLLYSFEEGEDGEITAPELIRRVEAKDLEAKELWVGGTIANSEHGEKLKQLGANVTPGIKAAVQNLKQKIAQDLQLPQLELTK
>NZ_AP018255.1|WP_096691970.1|9205384_9206953_+|type-I-MYXAN-CRISPR-associated-Cas8a1/Cmx1
MQIEFDLSNPSYTLLHRAGLAGLWISLNQLEKDKVELSHKIKWEKTNRKIMLSWEDNGEDKAVIEWLLNECFQLQDGLIALRGLDAKTMRKDALVIVHQGVLGTFLQHNSTHKSTGVVKETLQLDEGEIQIPITYKSLESYAYQDFASNLCDKKGKFLNKPISVAGWLNPGAVVRHVAFSTDTSFEEPPENAFLLLFAPVACYYYVLRSRLRDKRAQYALVIPEIRDLEKYALYRQNKHLRNAVYKDFYASGLGDAGLRFLTYETTANIVKNFGLSSCQVVTLGTVAWSTQQKTRTDLYIVKADSQVCKNYQVCKDYLQDKSVKGKENGFIACSFAREIIAENLAQNKPWYEGLADKVNSNELFERLTYERGGLHQMVQKVDWAEREKLFVQVCHEAIKYTYGKIYDNAQKRHEIANFDRETVRIRTGLARCKNANTFREFITDFWSRAGKIPTLQENWQDLMELVMQEKHWKKSRDLALLALASYKGKGVSNGEDEGESDADENTEVKESDDGIYGFDDLE
>NZ_AP018255.1|WP_096691969.1|9202967_9205394_+|CRISPR-associated-helicase-Cas3'
MLMYTKFMSDFKGFKPLLAKSLPKKGSKDYSEQARGAAKYTGHISLVMQAADVLVEVLGEQILKQLGLIDVDLKYFAKTVKLGAYLHDWGKANQHFQEMVYWKSLDLQSKEPKVVNFKKVLKELAQTHSDRQMLRHEIISGILALQVPSIKEWLGKCEDVDLVAAVWAAMGHHLKTGVNKDDKPAEFIAEISDGTGGELNIYTHHQDFEAILKMGCKYLGLPEQLPELPKETWSKSELQTALNLLRDEFIKLESNLTWEQQKFIAAVKATVMAADLAGSALPLVEEDFKSWMQEVLSLTLSSEEIQRLVNQRLEGQPLRPFQKKIAQASRRVTLVKAGCGTGKTVGAYAWAEKWAVNRKLFFCYPTTGTASQGFIDYAEGTDIEAELMHSRADLDRELLFSGDSDESEGIDARLSAFTAWRKKLLVCTVDTVLGLIQNNRKPLYAWTAIAQSAFVFDEVHAYDARLFGALLEFIKTFRGAPILLMSASFTPGQLTKIREAMAELGEKIDEPIEGPEELEKLKRYEIRQLTEVSDSKDMPEVWESVLEALKNRQKVLWVTNSVQSCIDLYRQAKIQVQKLPVEANPLIYHSRFRYRDRVSKHKAVIDAFRTNEPVLAITTQVCEMSLDLSADLLVSAMAPFSALIQRLGRLNRRMSKPEEGTGLAIIYPWKNNKPYKATELNTGKDLLNRLTDKSAVSQHDLSEIAAELSSNIPESVKSIWLEGNWCAYPDFLRQPGYTVTVLLQDDLTSIKDAALLRSDKSFMREAQGWSVPVHIDKNLYDWRRIKFYPIAAPEDIYYSEETGAEPCK
>NZ_AP018255.1|WP_096691968.1|9202224_9202938_+|type-I-MYXAN-CRISPR-associated-protein-Cas6/Cmx6
MKTICNARSLVFEGEFFVKPSFNVSASQSTGDDLAPFVELAYQVHGKYLPADHNYGLYAAFVHLVPELRQHDDVSILSIPGIGDKQGKILLTEQSYLKIRVPVTKIPLVYQLAGKRFSVGVHEIQIGIPTVSVLKPTSKLRARIVTIKGKEYTEKDAFLEAARRQLQSLNISGDISVPLDRQGLPSRKTIKVKRFTIVGFTTEITQLSDEDSLKLQQWGLGGKRHMGCGIFMPYRNL
>NZ_AP018255.1|WP_096691967.1|9199260_9199518_-|hypothetical-protein
MDVTKTIDAQVTLPIDLYDLYLAPRIFSNLIILSNCKFSLRSYPHRVVNHYASSKSPLEEDSKNFVIFVTQYHFLCSFYLEVQDK
>NZ_AP018255.1|WP_096691976.1|9214489_9214765_-|hypothetical-protein
MSTTNDSNLQQPTPEQIQYWKELDELDCIAFAGKPVSDSEFTEIVQSLLDGSNWVRHLNKVKAKKQQLLAKVAELEEIEREIEQKLTKSSN
>NZ_AP018255.1|WP_096691977.1|9214951_9215197_-|hypothetical-protein
MMTQSRYSSVDEQGTVLSDKASEPSRETVKHLVIGSPKAVKSTIYSLQVLGYAQVGDWSQLIPTANPGEVMSILSRNIAVQ
>NZ_AP018255.1|WP_096691978.1|9215379_9215565_+|hypothetical-protein
MPRPKRTEKDKYGESKKKYQIMLTSTASSELDTVSEELGITRSELLELVIRQGFLKQVKLE
>NZ_AP018255.1|WP_096691979.1|9215651_9216491_-|hypothetical-protein
MQRKVKFILLFVTSLIVISITSFALFLNTVAPMRANTPIEAVTIGFQTPTPVRFFPNTFESCTKDSNFTQCSVDVQKRPLEITLNYKQLERNQLPRCIASYAGQDYSCIVSSGGYAGGVRFLNSVVITSTLGLTSQQLQSLSKDNWFAQLNQTSWLQVSTILSGIFGILAAIIIWQYPNKCIQITASLVIGFNIFYLSVIQLYKIKPVSSILYSLNEPQIMLIAGLFAALGIGMILMLNWRRQNLIKIFALIGGVNVFHIFGLLVYSFLVSGGFVIADY
>NZ_AP018255.1|WP_096691980.1|9216623_9218162_-|hypothetical-protein
MLSITLAVTTLAFLIPISVVAKTATPNNPNKVWMLSSIAQQFAEAGQKQKASELITQALPLINNIPSNCDKPKPMATIAGNYARVGQNTQALQLLEQAIQVAKTAKGCNSTNDAVENLLDISNKYIDEGLYELALQSVRGFNDAPSSLYRVYGLSLIARDLAKSNKVDQINTLTTEILNAAQNIKDANQRAFALSRGAYELIEARLNTQALKLLAEAQKAIPAIKDVDGKPDTLLLIARAYNKLGQPTETIKLLEQATFATQKVSKISFRMHNLGAIAAEYAAVNQNNSANLLLAQALTTANKTKPTSERDNLLITVANYTAISGKYDQALKIASSIKNRQNQAAALSQIAGKVARQGKFDLALQIAQRQIGDAQYKAGALMEITRALVTAKQLDKAVEVAQSINGKYEKAGVLSEIALKYAENGNPEKAMKLVNIIDKLSDEGNDIDWMLPTVATSYAKAGNFDQAIKIANSIKIKEARVNALTKIASEYSEKGQKDKSLLLLAQALELAM
>NZ_AP018255.1|WP_096694480.1|9218532_9219336_+|peptidase-S51
MVNQARGCSRCSNKVDVVIIRANGGDAYNQPIYNMRGVDSVETLIINNRNHANNASIVEKVKNAEVIFFAGGDQCKYIRNFQNTKLEKAIESVSARGGAIGGTSAGAMIQSSFVYNACGRAVESRDALYDPYRNIEFTYNFLPWPNLRNTIIDTHFDTRDRMGRLMTFIARQLQDGKAKSVLGIGISEETSVVVDRNGNALVMGRGPAYFVLGNHQPEVCERGRYLTYRDFKIWRVNRGETFNLRNRPKRGYYLRSVERGRFNSNPY
>NZ_AP018255.1|WP_096691981.1|9219447_9220629_-|alpha/beta-hydrolase
MMTAASETWVTPTTDQIARTKAKIDASVQNIKANPSYRPGSAPFYGFHDAGKAVRGTVIIFHGFSAKPTQLSALSDYLYSNGFNYYQANLANHTLQPPDKFWCQVDLKPEILNPLREKVNKDQVLQDFIKSLPEDPTKYQRPPMLQMANLVSRLMLIEPRLMKIMAAAENDNDPNFSRYFTSNHMDYLTDARKRLSELDAMPAPIYVIGLSVGAAIALGLAADQPKRIVKVVAYTPLLKLYEPTVERYIELAGPLDMYEKSWHPGESFPVGALTAASRYGAYVREPQNIKALKNVPTWMVLTENEDAASIPTNEDFFSKIGGTDAGHRLFKYPASDLVPHPLAEPNVQSQGMTNRFWQSLYQETFRFLTTGEYDPSNMDTVEQDPNLPQVAPV
>NZ_AP018255.1|WP_096691982.1|9220774_9221074_+|plasmid-stabilization-protein-ParE
MYEIIYTESVFQDLRELRADKRAKILDSIEEQLTYEPTKATRNKKILVNLVPPWEYIEPIWELRVDEYRAFYDVNEEDASVTVRAIRHKPPHKTTEEIL
>NZ_AP018255.1|WP_096691983.1|9221070_9221313_+|hypothetical-protein
MKEVNLEAITLENCISDAQKEQILINRDGKPVALIIGLEDMDSEQLELSKDSNFWKLIALRRQEKTISRAELERRLSNEL
>NZ_AP018255.1|WP_096691984.1|9223314_9223713_-|hypothetical-protein
MTKATLDTQSPEIKRHYITQLLEKLTIDYHNTRQERKEIAAKYPVDDEEFTIIEEVELLTVNIRGYANTIKSQAKIENKQETIQRLQAMTVFNIPVIANFYFYNENYPKMKAYIRELDYLRLVLIEFLALYI

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Crispr_ID: NZ_AP018255_37

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_37

9705864-9705948

Orphan

A:N

Consensus_repeat	Method
AGTGCTGAGTCAAGAAACAGTGCTGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_37

>merge|NZ_AP018255|37|9705864-9705948|CRISPRCasFinder
AGTGCTGAGTCAAGAAACAGTGCTGAGTCAAGAAACAGTGCTGAGTTGAAAGTGCTGAGTGCTGAGTCAAGAAATAGTGCTGAGT

>NZ_AP018255|37|37|9705864-9705948|CRISPRCasFinder
AGTGCTGAGTCAAGAAACAGTGCTGAGT	CAAGAAACAGTGCTGAGTTGAAAGTGCTG
AGTGCTGAGTCAAGAAATAGTGCTGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096692344.1\|9702564_9703206_-\|restriction-endonuclease-subunit-R	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692342.1\|9701192_9701936_+\|isoprenyl-transferase	unknown	unknown	gnl\|CDD\|184841
NZ_AP018255.1\|WP_096692337.1\|9696563_9697820_-\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|214829
NZ_AP018255.1\|WP_096692354.1\|9717069_9717369_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692346.1\|9708218_9708482_-\|beta/gamma-crystallin-family-protein	unknown	unknown	gnl\|CDD\|365821
NZ_AP018255.1\|WP_096692349.1\|9710495_9710717_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
NZ_AP018255.1\|WP_096692353.1\|9715808_9716984_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_AP018255.1\|WP_096692335.1\|9692528_9692819_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692352.1\|9713391_9715737_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_AP018255.1\|WP_096692355.1\|9717582_9718674_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340841
NZ_AP018255.1\|WP_096692340.1\|9698782_9700597_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018255.1\|WP_096692343.1\|9701974_9702442_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692347.1\|9708595_9709024_-\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_AP018255.1\|WP_096692351.1\|9712158_9713163_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|133037
NZ_AP018255.1\|WP_096692348.1\|9709625_9710054_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692350.1\|9711212_9712154_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|371357
NZ_AP018255.1\|WP_096692336.1\|9693067_9693631_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692341.1\|9700825_9701170_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692338.1\|9697993_9698194_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692339.1\|9698356_9698734_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096692340.1\|9698782_9700597_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.81611e-08
NZ_AP018255.1\|WP_096692342.1\|9701192_9701936_+\|isoprenyl-transferase	gnl\|CDD\|184841	PRK14831, PRK14831, undecaprenyl pyrophosphate synthase; Provisional.	7.95913e-158
NZ_AP018255.1\|WP_096692337.1\|9696563_9697820_-\|alpha-L-fucosidase	gnl\|CDD\|214829	smart00812, Alpha_L_fucos, Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.	1.77291e-116
NZ_AP018255.1\|WP_096692353.1\|9715808_9716984_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.69322e-39
NZ_AP018255.1\|WP_096692346.1\|9708218_9708482_-\|beta/gamma-crystallin-family-protein	gnl\|CDD\|365821	pfam00030, Crystall, Beta/Gamma crystallin. The alignment comprises two Greek key motifs since the similarity between them is very low.	1.59794e-16
NZ_AP018255.1\|WP_096692349.1\|9710495_9710717_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	5.45484e-15
NZ_AP018255.1\|WP_096692350.1\|9711212_9712154_-\|methionine-synthase	gnl\|CDD\|371357	pfam11051, Mannosyl_trans3, Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.	0.00104634
NZ_AP018255.1\|WP_096692351.1\|9712158_9713163_-\|sugar-transferase	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	0.000264094
NZ_AP018255.1\|WP_096692352.1\|9713391_9715737_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.43442e-133
NZ_AP018255.1\|WP_096692355.1\|9717582_9718674_-\|hypothetical-protein	gnl\|CDD\|340841	cd03813, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.	0.000629153
NZ_AP018255.1\|WP_096692347.1\|9708595_9709024_-\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	1.95958e-11

>NZ_AP018255.1|WP_096692344.1|9702564_9703206_-|restriction-endonuclease-subunit-R
MTQAPTVQAKDITMLTLETNFGLQWVEDEQFFREWQDNLPEITGAEKQRLDRVKASYSNLLRYPPLLENTVKMVVISHLLDLADFYLSPFHIKSEKSVQISADDDGVTVKGNIDVLVLSEQLTVVVIESKQAAFSVEVGKPQLLSYMLALSDSEKPIYGLVTNGGSFLFVKLVKQGTAKYALSRLFYIFNPGNDLYIVLSIFKRLGQLISVTK
>NZ_AP018255.1|WP_096692343.1|9701974_9702442_+|hypothetical-protein
MRVLLGGIIISLGLSSLPVQAQQPKVSDSQVAAMVEALRQSAPKNTPNDGLYSDWQVKPGTVKLWTNFCLKKELTPTQFENDPATARKVVSCVINRELSKQLKAIPNNETAAVGSVACWWMTGNYTGCNRGFTADFVKNVTKRYQQQRSKPEPQR
>NZ_AP018255.1|WP_096692342.1|9701192_9701936_+|isoprenyl-transferase
MNIPIDLELQRLPQHVALIMDGNGRWAKKRGLPRIAGHRQGVRTLKEILRCCKDWGIKALTVYAFSTENWGRPFEEVEFLMRLFERALKKELEAMHSEGVQIRFIGDLSALPQSLVKLIDLAVEKTKYNQTLQFNIAVNYGGRHEIINACRQIGELVQTGKLDASEINEQLFSQQLYTANSVEPDLLIRTSGEMRLSNFLLWQMAYTEMYFTDVLFPDFDRTAFHQALLSYQKRDRRFGTLKTSLSA
>NZ_AP018255.1|WP_096692341.1|9700825_9701170_+|hypothetical-protein
MAHTIGELHDVLEQLAIDEINHMTKFWGFGVWAYPNTSLQRVLSIFIKTRRQSEVRNNLFRTLARMMKTLNWRAWTLNNKITLLLVLFYTITRLLKWNNTLTPQYLGELFGMNH
>NZ_AP018255.1|WP_096692340.1|9698782_9700597_-|tetratricopeptide-repeat-protein
MINCTKIGVLIDNIESALDGQGRFIEAHRNYVELLRVLSDTHVDSTTIITSRDRLCEPSLNVEHYRLPGLEKSAWLHFFQNRGAEIDLPTLEDMQRAYGGNAKAMGILCGTIQEDFAGNMARYWQENRADPLAVTDLKNLTVSQINRLQSLDLSAYRLLCRLGCYRYQDVAKIPTSGLYSLLWDIPAIEHRQIITSLRNRSLIECHQGEYWLHPVIRAEAISRLRTSTDWEITNQKAAEFWTESIQQITTFKDAIQALEAYYHYIEINQFELAGKVILKSRNNQWRQYLPLGSTLYRMGCVQPLISLINQIIQKVENYHSERSVMRSICRRLESHNLSELYNILGDLYWITGKINLAITCQQKTIQLATKNLKSLIPQQENKHKIYYLRMLEVDSLLSIGLYQLDLWELEASSQLFQQVIDKAQNTDHHRWAEKASVCLALVNSYSGFHEKAREAVTTSQIIIQELNEHTGRHTYFIQMLGQTYLNLGDYIQAKQMFTTALNFAEKSHYTQVKAKSLSGLAQIYDHQSEFELALTYHAQAIELLDKIGAKCDLAVAYFQLGLTYQNLQSPSSREAFNRAIEIFTQMQAPKQVERVSKNYFTEFN
>NZ_AP018255.1|WP_096692339.1|9698356_9698734_-|hypothetical-protein
MFHLKKNAIYFVLLPIFSATLLAGIANAETLKTKHFSVKITRNCAEGNVTCNNVTYVGKDLKTGKSIRLTGKTIHTIGADGVTPSRFLGYEFRNNQYLYQVTANNQLQVYKSGKLILQEQGTVTY
>NZ_AP018255.1|WP_096692338.1|9697993_9698194_-|hypothetical-protein
MKTTEDLRARAKELSSELTAYSKQGVELIHAGKRKEGHELMRKAYETSKRCQAVLGEIIRREKLLS
>NZ_AP018255.1|WP_096692337.1|9696563_9697820_-|alpha-L-fucosidase
MSENIDNWFNTARFGMFVHWGHSSQLGCELSWPLAGGVFSLPFCNNIKVDEYHQSAKTFNPQKYNPQEWARLAKRLGMQYAILTAKHHDGFAMFDTQASDFSIRNSPYQKDIVKEFIEAMRSEGIRIGLYFSLIDWHHPDYPAFTEADKPYNLLKHRQPTTEQWHKFTDFMFAQVRELLTNYGKIDIIWFDGSWERTPQQWRAAELNDMIRALQPDILINDRLPGFGDFTTPEQFIPPQPLDTMWETCMTINESWGYNSVDTNFKSSRQIIHTLSEVAGRGGNLLLNVAPMGDGQIQPEFLERLAAVETWMQAHAESIIGTKPGLEPWQFYGSSTRRENLIYLHLLWKPYETISVRGVPIKKIKSVYNLKDKTPLEYTTRCAIMESFNPNPMGELTIIVPESVIDSYATVIVIHITED
>NZ_AP018255.1|WP_096692336.1|9693067_9693631_+|hypothetical-protein
MKNIFLFGIVGLSLAGAVFCSSVAKAEETICDGDLGAVTLDNVKVPSDKSCNLNGTTVKGNIKVESNAKLKASDVKVNGNIQAENAENVTVENNSSIEGSIQIKQSKGANITRTRIKQDLQFEKNTNQLVANDNSITGNLQAFQNTGGVEIRRNRVNGNLQCKENVPSPVGEENRVRGNKEDQCSSF
>NZ_AP018255.1|WP_096692335.1|9692528_9692819_+|hypothetical-protein
MIDGGVSYKTDTSSKTIEPPIQTNTARVLKWTGVITTQKWMIFYTKVLSKFAIAQNLKLTLKVSISVEGDISSQKIEDTKVALQELGLDSDIKLEN
>NZ_AP018255.1|WP_096692346.1|9708218_9708482_-|beta/gamma-crystallin-family-protein
MAEMQVFNNGCFCGKVGIFKQDLAHVRDFWNDIITSVKVISGTWQVWEHPDFHGRTIILGPGEYPNLAITRGGIYNDTISSVRILSE
>NZ_AP018255.1|WP_096692347.1|9708595_9709024_-|RDD-family-protein
MKSYNLYTQKQYVKLATLNQRLSAHILDFIIIYLIFYLFYFSTSYLSKVTGFPKSLVGISFILAIFYRFFSDALNEGQSLGKQAMGISVVDAVSKRPCTIMQSFIRNLFLSSLGLIDLIFIFSKKRQRLGDRIANTIVIKKN
>NZ_AP018255.1|WP_096692348.1|9709625_9710054_-|hypothetical-protein
MNARGIFFGLFCTTLALAPMTNINSAVAVERVNNYQSYGAKANLIAASNFDYPSGYFKDNTWGVHLSYSGGEYVFERTHVKTQQSIASRTFTKSGNKNRQIYTWKKDGYTYRVTYRPQQSNTIRFEVYHPSGQAILNRLLYR
>NZ_AP018255.1|WP_096692349.1|9710495_9710717_+|helix-turn-helix-transcriptional-regulator
MEPIKIMFRLKEMRTKKEISQNELARLCEMSVTNIQKYEQQKMKSIPFDTLALFCSILHCQPGDLFEKVEMTK
>NZ_AP018255.1|WP_096692350.1|9711212_9712154_-|methionine-synthase
MTRGIYIIANDKVIDHAIALLNSIRLHDTHTPIVMIPYDDNYHNIADTLNRYYGVTVYEDLEFIDRLSNKLHETFGGKFFARPNQFRKQACWFGQFDEFLYIDTDIVVFEKIADNLNYLAHTDFINCDYQHLGGIKNVFSTKVFEDKVFTQEEVKDIFNGGFWGSKKNLVSEQDLYEVFTECAEHPEYFDFTEKTSDQPIINYMLLKRIKNRFNIVRRSGQAPGNWAGTPHFQLKQGQGNILIDPTVNQQLQYLHWAGIRIQPGCPYWETWEYYRNLNPELPPAYFPAPIQKNQWQKTVDNFKNQLRQIKTKL
>NZ_AP018255.1|WP_096692351.1|9712158_9713163_-|sugar-transferase
MTNGIYILANDVVYDQLVALLNSIEVHLRGAYPVCILPYDDRLERVKEEVKKRSNVEIFADTPVIELWEKFAFDAWQAHPSAFKIWSEQGTSGVYRMGMHRRFCAFDGPFDRFIYLDADILVLNSVEYIFQQLNNNDFVVYDFQYKDPAHVYNINSKALYNVFPQTCVQSEIFCAGMYASKKGLLDAEKRNYLLSQLRQGDAEVLYMNAPDQSVLNYMIMRAGISTWNFARHLGEDKVTGCCVTSPHFEERDNLLYDKQSRLTYLHYIGLSSKLFTDICAGENIGFPYRDIFLHYRYLNEPSRRPIFSTKLKAYNAPPSFATRVLQKLGMKIEV
>NZ_AP018255.1|WP_096692352.1|9713391_9715737_-|ATP-binding-cassette-domain-containing-protein
MSTVKLLIRFAKPYPGWVFLTFLLGFSGALFNGVGTTLIVPVVLKIVGLDVEFNNAPDILKFIMRPFDQVPEDYRTLAMAAAIILTIVLKNVAGYASSLTSSSLARTLTTDMRDAGLKNLLEVDLDYFAKTKVGDSINSLGGELGKAASAINTVIKVAIIVITILVFIGVLVSISWQLTIAATFLLSLVTLVNQYAIARSKDYGKLLSDMSRAYSISVLEVMNGMRLVRATANEDREYKKIVKLIRDREQADFKSQANSEAIGPVSEVMGITALVLIILLSKYLFASQITSLSAVLFTYLLVLLRLLPFISQLNAIRSSFANASTSVSIATDFLRRDNKPFMSRGTKIYKAIEKGIHFNKISFAYPGNEKLVLKEVDLFLPKGTTLALVGSSGAGKSTMADLLPRFYDVISGSILLDNVDLREFDIQSLRRAMGIVSQDTFLFNDTVRYNIAYGKPDATEDEVIAASKRANAYEFITKLPQGFDTFIGDRGVMLSGGQRQRLAIARALLQNPEILILDEATSALDTVSERVVQAAIDDLSKDRTTLVIAHRLSTIQGADQIAVLDQGKVVEVGTHNSLLQKGGFYTRLYSMQFGGTEESKQQKEVKVSEGEVEALTHNQNLLRIPHELRTRLNSTIGFLQLLLDEASDSQEREELIEELRKSTSRVENIIEIFEDIIKLQTSFITSASDTYKIYKDNLDRIVKKSRTHVNFMLHSLPLIVDSHVQTSEQNEIIKNIYYATIHLLDTIQELEDCIKSKSLNAVAYNNGHEYNHNGNSTPILI
>NZ_AP018255.1|WP_096692353.1|9715808_9716984_-|glycosyltransferase-family-4-protein
MTNDQLKFSLVVSDLSGGGTVRAYLLAQVLQQLNHKVEIVGFNFGKDLYAIPPNGIEVISIPGSNYPNFFGSARQLLHSLSGDVIYAVKPKPTSFGVGLLHKLTRRRPLLLDMDDWELSWHGGENWRYQPSVKQFARDILKSNGALRFPDHPVYINWMERLVKYADAVTIDTQFLQDRFGGVYVPNGKDTEMFNPDKYSSAASREKYGLSDYRILMFPGAPRPHKGVEDVLMALDKLNHDDLRLVIVGGSPYDDYDDRLIKQWGRWIIKLPKAPVETMPEIVAAAHIVVVPQRSDIVARAQFPLKLTDGMAMGKPVISTRVGDIPEILAHTGYIVDPNAPEQIAMQIEAIFNDYDTACLKGRQARERCIEKYSTSTMAVTLFEIIQKINHS
>NZ_AP018255.1|WP_096692354.1|9717069_9717369_-|hypothetical-protein
MDNCQKRAQKFQTETILGQWRQFIEDVAVPAYYDWQQSSNLQKASFFAKRYLRIQENDLKPHYLYPYDQEDTGNRNFGISEQSLISIIGLYRKAKRLAV
>NZ_AP018255.1|WP_096692355.1|9717582_9718674_-|hypothetical-protein
MNNPPIYFYIPKVDFPDWEIPEDADKGWQIFESKPNNAVYNWSLQTYIRLVASGFECQLVDTLPASGIIFAHRYSLPFNLQPKPNQLIVCMKADHDFHPYAQLHVVQNQQEVNTSDGHYFIPHWRQPGLIPRDSERGDKFVNVGYYGIEKNIASELKDPAWSEQLKALGLHWHIVGENAWNDYSQMDAVIAVRNFQFQESYKYKPASKLYNSWHARVPAIVSGDSAFRAERRSELDYIEVASPSETITALKRLRDDKALYHAMVKNGRARAEDFTVDKVCVRWRNLITEVAVPAYHRWCESQYKQKLYLAKRSLIIQENNLKPQLIYPHDRENVKNDHVGFSDLIIISTMQKYRSFKKLICKN

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Crispr_ID: NZ_AP018255_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_38

9775374-9775461

Orphan

A:N

Consensus_repeat	Method
GAAATTGATGTGAACCCACCCGTACTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_38

>merge|NZ_AP018255|38|9775374-9775461|CRISPRCasFinder
GAAATTGATGTGAACCCACCCGTACTATCAGGGGTTTACCTATATCCTGCTAGATAACGAGAAATTGACGTGAACCCACCCGTACTAT

>NZ_AP018255|38|38|9775374-9775461|CRISPRCasFinder
GAAATTGATGTGAACCCACCCGTACTAT	CAGGGGTTTACCTATATCCTGCTAGATAACGA
GAAATTGACGTGAACCCACCCGTACTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096692398.1\|9763666_9765097_+\|form-I-ribulose-bisphosphate-carboxylase-large-subunit	unknown	unknown	gnl\|CDD\|176981
NZ_AP018255.1\|WP_096692396.1\|9760774_9761548_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_AP018255.1\|WP_096692403.1\|9770772_9770964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692409.1\|9781860_9782499_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132891
NZ_AP018255.1\|WP_096692401.1\|9766397_9767018_+\|lipase	unknown	unknown	gnl\|CDD\|238873
NZ_AP018255.1\|WP_096692406.1\|9775640_9777758_+\|peptidase-C14	unknown	unknown	gnl\|CDD\|334197
NZ_AP018255.1\|WP_096692412.1\|9785432_9786173_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692404.1\|9771454_9773983_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|100097
NZ_AP018255.1\|WP_096692405.1\|9774175_9775366_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235227
NZ_AP018255.1\|WP_096692399.1\|9765287_9765686_+\|chaperonin-family-protein-RbcX	unknown	unknown	gnl\|CDD\|367041
NZ_AP018255.1\|WP_096692413.1\|9786217_9786565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692410.1\|9782660_9784139_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057
NZ_AP018255.1\|WP_096692397.1\|9761863_9762928_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225829
NZ_AP018255.1\|WP_096692402.1\|9770197_9770539_+\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_AP018255.1\|WP_096692400.1\|9765744_9766095_+\|ribulose-bisphosphate-carboxylase-small-subunit	unknown	unknown	gnl\|CDD\|365873
NZ_AP018255.1\|WP_096692411.1\|9784219_9784894_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692414.1\|9787133_9788393_-\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|274295
NZ_AP018255.1\|WP_096694499.1\|9779148_9781008_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_AP018255.1\|WP_096692408.1\|9780979_9781738_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018255.1\|WP_096692407.1\|9777800_9778673_-\|S-methyl-5'-thioadenosine-phosphorylase	unknown	unknown	gnl\|CDD\|180977

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096692398.1\|9763666_9765097_+\|form-I-ribulose-bisphosphate-carboxylase-large-subunit	gnl\|CDD\|176981	CHL00040, rbcL, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.	0
NZ_AP018255.1\|WP_096692396.1\|9760774_9761548_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	6.53333e-156
NZ_AP018255.1\|WP_096692409.1\|9781860_9782499_-\|hypothetical-protein	gnl\|CDD\|132891	cd07051, BMC_like_1_repeat1, Bacterial Micro-Compartment (BMC)-like domain 1 repeat 1. BMC-like domains exist in cyanobacteria, proteobacteria, and actinobacteria and are homologs of the carboxysome shell proteins. They might be encoded from putative organelles involved in unknown metabolic process. Although it has been suggested that these carboxysome shell protein homologs form hexamers and further assemble into the flat facets of the polyhedral bacterial organelles shell at present no experimental evidence exists to directly support this view. Proteins in this CD contain two tandem BMC domains. This CD includes repeat 1 (the first BMC domain of BMC like 1 proteins).	7.77429e-61
NZ_AP018255.1\|WP_096692401.1\|9766397_9767018_+\|lipase	gnl\|CDD\|238873	cd01835, SGNH_hydrolase_like_3, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	7.14791e-66
NZ_AP018255.1\|WP_096692406.1\|9775640_9777758_+\|peptidase-C14	gnl\|CDD\|334197	pfam00656, Peptidase_C14, Caspase domain.	3.18265e-12
NZ_AP018255.1\|WP_096692404.1\|9771454_9773983_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|100097	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP018255.1\|WP_096692405.1\|9774175_9775366_+\|sulfate-adenylyltransferase	gnl\|CDD\|235227	PRK04149, sat, sulfate adenylyltransferase; Reviewed.	0
NZ_AP018255.1\|WP_096692399.1\|9765287_9765686_+\|chaperonin-family-protein-RbcX	gnl\|CDD\|367041	pfam02341, RcbX, RbcX protein. The RBCX protein has been identified as having a possible chaperone-like function. The rbcX gene is juxtaposed to and cotranscribed with rbcL and rbcS encoding RuBisCO in Anabaena sp. CA. RbcX has been shown to possess a chaperone-like function assisting correct folding of RuBisCO in E. coli expression studies and is needed for RuBisCO to reach its maximal activity.	5.85414e-62
NZ_AP018255.1\|WP_096692410.1\|9782660_9784139_+\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	6.80909e-74
NZ_AP018255.1\|WP_096692397.1\|9761863_9762928_-\|transcriptional-regulator	gnl\|CDD\|225829	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms].	2.06235e-101
NZ_AP018255.1\|WP_096692402.1\|9770197_9770539_+\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	2.72583e-61
NZ_AP018255.1\|WP_096692400.1\|9765744_9766095_+\|ribulose-bisphosphate-carboxylase-small-subunit	gnl\|CDD\|365873	pfam00101, RuBisCO_small, Ribulose bisphosphate carboxylase, small chain.	5.12158e-59
NZ_AP018255.1\|WP_096692414.1\|9787133_9788393_-\|ATP-dependent-DNA-ligase	gnl\|CDD\|274295	TIGR02779, NHEJ_ligase_lig, DNA ligase D, ligase domain. DNA repair of double-stranded breaks by non-homologous end joining (NHEJ) is accomplished by a two-protein system that is present in a minority of prokaryotes. One component is the Ku protein (see TIGR02772), which binds DNA ends. The other is a DNA ligase, a protein that is a multidomain polypeptide in most of those bacteria that have NHEJ, a permuted polypeptide in Mycobacterium tuberculosis and a few other species, and the product of tandem genes in some other bacteria. This model represents the ligase domain.	5.30336e-09
NZ_AP018255.1\|WP_096694499.1\|9779148_9781008_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.56785e-114
NZ_AP018255.1\|WP_096692408.1\|9780979_9781738_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	3.06107e-25
NZ_AP018255.1\|WP_096692407.1\|9777800_9778673_-\|S-methyl-5'-thioadenosine-phosphorylase	gnl\|CDD\|180977	PRK07432, PRK07432, S-methyl-5'-thioadenosine phosphorylase.	0

>NZ_AP018255.1|WP_096692405.1|9774175_9775366_+|sulfate-adenylyltransferase
MSNQKQTIAPHGGELVNRIATPAQREEFLSKADYLPRVQLDERAVSDLEMIAIGAFSPLTGFLNQADYNSVVDSMHLESGAAWSIPVTLSVSEDVAAPLSEGSYIRLDNPEGKYIGVLLLTEKYTYNKEREAIKVYRTDDEKHPGVKVLYNQGSVHLAGDVWLLEREQHPLFPKYQIDPAASRSLFLEKGWRTIVGFQTRNPIHRAHEYIQKCAMETVDGLFLHPLVGATKEDDIPADVRMRCYEILLENYYPKDRVILAINPAAMRYAGPREAIFHALVRKNYGCTHFIVGRDHAGVGDYYGTYDAQYIFDEFKPKELGITPMMFEHAFFCLRTKQMATTKTSPSTPSERVHLSGTKVREMLRSGELPPPEFSRPEVAAELARAMHVGVGLPISC
>NZ_AP018255.1|WP_096692404.1|9771454_9773983_+|NTP-transferase-domain-containing-protein
MRAVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKRHNIYEVIATLHYLPDALRDYFQDGADFGVQMTYAVEEDQPLGTAGCVKNIAELLDETFLVISGDSITDFDLTAAIEFHRSQKSKATLILTRVPNPIEFGVVITDKDGRINRFLEKPSTSEIFSDTVNTGTYILEPEILDYLPENTESDFSSFLFPLLLAKGEPMYGYIAKGYWCDVGHLDAYRESQYDALDRKVSLDVAYNEVSPGLWVGQNTYIDSSAQIEPPVIIGDNCRIGARVQIEAGSVIGDNVTIGADASLKRPIVWNGAILGDEAHLSACVISRGTRVDRRAHVLEGAVVGSLSTVGEEAQISPFVRVWPSKKIESGATLNLNLIWGNTAQRNLFGQRGVQGLANIDITPEFAVKLGAAYGSTLKPGSKVTVSRDQRNISRMVTRSLIAGLMSVGIDIQNLDATAIPIARTVIPTMAVAGGIHVRVHPDRPDYILIEFMDAKGINLSKPKEKKIEGAFFKEDMRRALVHEVGDVAYPSQVADTYCNAFEKFLHIDTIRNSRAKVVIDYVYAVSGAVLPQMLDQFGADAVVLNASLNKSAMSATNREALLTQLGHVVEALKANFGIQVSANGEQLILVDESGMPIRGEILTALMVDMVLTSHPRGTVVVPVHASSAVEQIARRHDGKVIRTKASATALMEACNKNPNVMIGGSGDTGFIFPELHPGFDAMFCIAKIIEMLTIQERSLASVRSELPRVIHKTYTVRCPWTVKGALMRYLVETHPAQNLELIDGVKICQPYDDSWILVLPDASEPLVHLYINSNDREWVDSTLRDYRARVQMFIEREEEAVVAEV
>NZ_AP018255.1|WP_096692403.1|9770772_9770964_-|hypothetical-protein
MGSFFGVIFMIVYVSGIWKFWNGFERTNFQRSLPNRLSLSLLWPVLLITNKSYRRNFRKALKG
>NZ_AP018255.1|WP_096692402.1|9770197_9770539_+|XisI-protein
MDKITQYQKIIQELLREYASIGGGTPDPDIETQFVFDTERNHYQLLRVGWRNDHRIHGCFLHLDIKNNKIWLQHNGTENEVTEDLVNMGVPKQDIVIGFHSPFKRQFTEYAVS
>NZ_AP018255.1|WP_096692401.1|9766397_9767018_+|lipase
MKSEHLPEVRICFVGESFVNGTGDPECLGWTGRVCVGANQKGYDITYYNLGVRRETTEALKQRWLSEVTYRLQPQYNGRVVFSFGVNDTVLEAGKTRVSFLNSILNARQILSGAKQLYPVLMVGPPPMLNNDQNVRIAELSDYFARTCNSLDIPYLDIFPVLKKSTVWFDEVGAYDQAHPRARGYQVLADLVQNWDAWSKWFPRLR
>NZ_AP018255.1|WP_096692400.1|9765744_9766095_+|ribulose-bisphosphate-carboxylase-small-subunit
MQTLPKERRFETLSYLPPLSDAQITKQVQYILNQGYIPAVEFNEQSEPTEFYWTMWKLPLFNARSTQEVLGEVQQCRSQYSNCYIRVVGFDNIKQCQVLSFIVHKPNQTSGGGYRY
>NZ_AP018255.1|WP_096692399.1|9765287_9765686_+|chaperonin-family-protein-RbcX
MNIKQIAKDTAKTLQSYLTYQALRTVLLQLDETNPPLAYWLHNFSADKVQDGEKFLESLFREKPELALRIMTVREHIAEEVAEFLPEMVRSGIQQANMEHRKQHLERITQISLSTPGASELESEQSNDDSND
>NZ_AP018255.1|WP_096692398.1|9763666_9765097_+|form-I-ribulose-bisphosphate-carboxylase-large-subunit
MSYAQTRTQSKSGYQAGVKDYRLTYYTPDYTPKDTDILAAFRMTPQPGVPPEEAGAAVAAESSTGTWTTVWTDLLTDLDRYKGRCYDIEAVPGEDNQYIAYVAYPLDLFEEGSVTNMLTSIVGNVFGFKALRALRLEDLRIPVAYLKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELKMPIIMHDYLTAGFTANTTLSRWCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKTLRMSGGDHIHTGTVVGKLEGERGITMGFVDLLRENYVEQDKSRGIYFTQDWASMPGVMAVASGGIHVWHMPALVEIFGDDSVLQFGGGTLGHPWGNAPGATANRVALEACIQARNEGRNLAREGNDVIREACKWSPELAAACELWKEIKFEFEAMDTV
>NZ_AP018255.1|WP_096692397.1|9761863_9762928_-|transcriptional-regulator
MVLLKKRALLLISTVLFGMVAIPWVKVAVAQETLQVNPSELTPAYGASAPPTGREDSPDGRREEIDYRVQALQPDFTGNLWVGSWRGLSRIDPNTGKILARVSLPNIAIGALAQDKVGRLWVGTYEGLKRVDLRTSEITGQNLFLPSKRVLSLLVDKRGYVWTGTDNGLALVSPDQGLIMTTLKNLPGVSANAMTLDAEGQLWVGTLDGLVRVNTKNAFILKTINNLPGGTVQALAISPEGLIWAGMPNNLLVVNPKNGMVLRSVTPLRGRNVTSVSFAKDGSVWVGTTNGLMRLDPNTGKLLDQVAGLPSSRVFALAPDTGNKLWIGTSEGLAWLMPNMPKAKEHLAFGRKVK
>NZ_AP018255.1|WP_096692396.1|9760774_9761548_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MPVTIQQIIQWKQLGRTIVALTAWDYITAQLLDAAGIDIVLVGDSMAVMLGYETTLPITLDEMIYHASSVRRGVKRALMVVDLPFLTYQESIQQAIHSAGRVLKETGAQAIKVEGGYPAMLETVARLVQAGIPVMAHVGLTPQSIHQIGLKQQGKTEDSAEHILNEAIALEQAGAFSIVLEHIPSNLASQITQKLSIPTIGIGASVHCDGQVLVTSDLLGLSEKQPPFAKVYTNLREIITGAITQYSTEVRERKFPT
>NZ_AP018255.1|WP_096692406.1|9775640_9777758_+|peptidase-C14
MKRRTFLQRIGSVLAVLGITEAEWLSLGNDYYQALAQTSSRKLALLVGINNYSQFPSLSGCLTDVELQKQLLIYRFGFQLSDILCLTDEKASKNSIQKAFDDFSNQVNPGDVVFFHFSGYASYIKSQKALILFDDNPKEQRQVNYLLEETLQLILRALPTENVIAVLDTSYNLNHAKNCSLKVRAQATPDNIDIADNELDYQNQLKSKLGATPKALVLSATSNPNESARESQMLGFNAGLFTYALTQYLWENTQTATVQVGLAKVNSTIQQLGGNQQSTLLNSKKIQQLGTFASNFSSNVQAGAEGAITSVEEDGRTAQLWLGGVPPHVLEYLGVNSKFAIVSTVSSLVMRSRSGLTAKASLRAETTSTETPVVLQVGQLIQEVVRVIPRNIHLNIGLDKLERIERVDATSAFATFNYISSTSAEPADYIFGKLLDKTQETGSVMVSSSRYGLFTLSGELIANTVGEVGEAVKLAAQRLAPKLQAILASKLWRLTENEASSLLNVKVTLETIMGAASQPIMVKESLRTQQFDTRAIKSNGIELNKLSIGNRIQYQVENKSTQTLYLMLLGLDTSKNVFGLCAWQNPTENTPSHPSLQNITIEPGATITVPQTNPGFEWIMQGLSDSWEVQIILSTAPFTQTLTALAATKVATGQQRIVAISNPLEVVSSILQDLHDVNKERKEASDTYVWNVNNWASFNFVFQAK
>NZ_AP018255.1|WP_096692407.1|9777800_9778673_-|S-methyl-5'-thioadenosine-phosphorylase
MAEAKIGIIGGSGLYKMDALLDVEEVFIDTPFGSPSDALILGKLDTTQVAFLARHGRNHTLLPTELPFRANIYAMKKLGVEYIISASAVGSLKEEVKPLDMVVPDQFIDRTRNRISTFFGEGIVAHITFGDPVCQNLAKVVSDSIAALNLSDVSLHRGGTYVCMEGPAFSTKAESNLYRSWGATVIGMTNLQEAKLAREAEIAYATMALVTDYDCWHPDHDSVTVEMVVANLQRNSVNAQKVIQEAVRRLSVEAPVSEAHSALKYAILTRLDSVPDATKQKLEVILKKYM
>NZ_AP018255.1|WP_096694499.1|9779148_9781008_+|EAL-domain-containing-protein
MVGLLTCLTIIVSYFLSLLLLPRAKSLQTGGIFFDDLYDNRFHQIQIELEKSRSLHQATLESTADGILVVDNGGKIAGFNQKFVQMWGIPEAILVSGLDKQALKVALSQLKYPKEYIATIRELYVRPDAQVSDAIAFKDGRIFERYSQPQYVGGQIVGRVWSFRDITAQKTAEAKIHHQSLHDLLTDLPNRVLFNELLASALKQARDSEDHLAVCFLDLDRFKTINDTLGHAVGDQLLKSVTKRLTQCLREGDIIARWGGDEFTILLPKIRDIKDAANIQERILAALNPRFDIEDHQLHVSASIGIALYPLHGLDAEILMKHADAALNRAKSQGRNKYQFYNFGITTQTTELFILENSLYYALEKGELVVHYQPQVNITTGKITKMEALLRWQHSGLGIISPTKFIPLAEETGQIIPIGEWVLRTACTQTKYWQKALAMPSLSIAVNLSARQFQQPNLVDMVQQILIETELAPECLELEITEGIAMQNIDLTKDILNELHRMGVSISIDDFGTGYCSLAYIKNFPIHTLKIDKSFVRDLATNRHDAAITSAIIALAHGLNMNVVAEGVETEEQRRLLQVLDCELMQGFLFSRAISAADATKLLRRYKSQKFNNHPFLVA
>NZ_AP018255.1|WP_096692408.1|9780979_9781738_-|pentapeptide-repeat-containing-protein
MGNFEHLTLLRAGALTWTKWRQKNSDIEPDFSSTDLHEAKLINTNLSYANFSLANLSNAELTNSNLSYANLIGADLSNSNLRNTLMANANLIATNLQSANLRDADLSEATLKRANLAFANLIEANLISVDLSEANLYEAEAIGVYFYKANFYKANLKNAHFGHAFLSRAKFTQANLNNADLRRTNLTGASFAFSNLENVNLTGANLKGANFKAAINLSIQQIQGAHNWENAEYDEAFLDVNTIVTQLKRDDY
>NZ_AP018255.1|WP_096692409.1|9781860_9782499_-|hypothetical-protein
MGIELRSFVFLDNLQPQHAAYIGTVAQGFLPLPGDTSLWIEISPGIEINRITDIALKSASVRPGVQVVERLYGLLEVHSGSQGETRAAGQAILAFLGVKRDECIKPRVVSSQIIRNIDAYQTQLINRTRRGQLLLAGETLYVLEVEPAAYAALAANEAEKAASINILEVQAVGSFGRLYLGGQERDILAGAAGAKTAIESVAGRTPSGGRQE
>NZ_AP018255.1|WP_096692410.1|9782660_9784139_+|AAA-family-ATPase
MLIFEEHFQDNCRNWVTRSGVDCSLGIKASHYSFDHKRSGSETYWLSWNSTEFFYELNNFHISIVLEKVTGVDSFGYGFIWGLLDSNNFFEFIISGNGLYRIAQCKNGTFEYYTNWKRCTSIQLGNGVNLLEVRRIGDNVEFYINSTVVETFSTQQVMDVLGKSFGFVIHDKINIKVHSLMITALDIEKEPTFDVDVKDSKPETKAAFIQHEAPDYDTLEKIITDLNQLVGHERTKQQLFSLANFLKVQTERKQRGLKTVDTSLHLMLYGPPGTGKTTIARLVGRLYKQLGFLERGHVIETDRAGIVGGYIGQTALRVESAVQQALDGVLFIDEAHALVPEDTPNDFGKEALQVLLKRMEDQRARLAVVVAGYPEEMEKFIESNPGLKSRVNRLFYIDHYTPNELLSIFKKFCIENGYSLDLSACIVLQRAFELAYAKRDKNFGNGRFVRTIFERSIEQQANRIVNKLEKLDNSEISLVTGDDLFFVNSDSY
>NZ_AP018255.1|WP_096692411.1|9784219_9784894_+|PEP-CTERM-sorting-domain-containing-protein
MKLCLRTAQSRVVVTFIGATAISFLSFKPANAVIFVEPIVTTANQDILATRNPRRLTNIQPGEVIEYGVPDFANNLQNATGNNIGSLVFDLETLAYSNPNATPAFNNEPVEWGDVNGDGRIGYSTTPGLTDIFKDITVTGNRITFSGGEISNGAIFYNPFSTKPDLKPGGGIIPPAAPPPADQDGPIRVASYYTAIPEPTSIFALFFAGLGAVTIKRNRLTRRT
>NZ_AP018255.1|WP_096692412.1|9785432_9786173_+|hypothetical-protein
MPQLETRESEGRETWSENVEVALMAAQTEILAQTQIRLGNSVHTLKLLRNGMMFVIILCSVCQKMTVALDRILESIPAVNQTKNLRQRFKRLKERIITLEAELNTRAIPYNLALQRFNEIAGTLSNISKKYDIADFTNFTDAQKKVTEFYELASRSRIDSPVPAEITIELLEDLYRGATSKKSLKQFVSALENGMARSAKNAAGIKALIGKVRGYTHELKIMGSSSRLLGKEVNGRIIFCELSDHL
>NZ_AP018255.1|WP_096692413.1|9786217_9786565_+|hypothetical-protein
MNTITLVELINNLLPDEKILEDVSCALNSELEKGGFSNLAREEIPPKNTPSEVLTKRFIMNNYETGFGNHYVSKVAIGGVERHRNGVVIPKYFFATLYYTEDLRLITVDFEDEAE
>NZ_AP018255.1|WP_096692414.1|9787133_9788393_-|ATP-dependent-DNA-ligase
MNISEYIESKRHAMKKIKSDIRERWNNRLVKNSWHLQGVEGAAQYLANYGNNIGIDKVIGFAVCAEQEGYPEVAMGFWQKAFEIETGAAPTPKKPKAAKTSTYAESTVIVEAAPRLVEELPSHLQPGRIVTMQPVDAPFDREYYINSPDYWGQPKRDGNRFVVIATKDQVYYQSRSTNIKAQPAIEINNLLLGLANQIGTFVLDGELYFRSSTGSEHRTAPQAAMVNEQNGQPVVAKPIYAIFKALWFSGQDLTNKSEALRIEAGEEIGKYLDNQYFEVVPTAKTQAEKASLAAKQLSEGREGEIWVSNSCQYTGGKDTRAYVMVRTKYNLELDLIITECTKTTVAGRPFSALNVAQEVNGKLVPIGSVGTGFSQHDMEEIARRHATNPGSVKITVRCQGLTERGKLWHARFIGICEEK

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Crispr_ID: NZ_AP018255_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_39

10109837-10109950

Orphan

A:N

Consensus_repeat	Method
AAATGTGAACCGTGGTTCACAAATACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_39

>merge|NZ_AP018255|39|10109837-10109950|CRISPRCasFinder
AAATGTGAACCGTGGTTCACAAATACATATCACATATTGGGACGGGGCAATCTTAAAGCCCATCCCACAAGATAATCTAATTAGCTTAAATGTGAACCGTGGTTCACAAATACA

>NZ_AP018255|39|39|10109837-10109950|CRISPRCasFinder
AAATGTGAACCGTGGTTCACAAATACA	TATCACATATTGGGACGGGGCAATCTTAAAGCCCATCCCACAAGATAATCTAATTAGCTT
AAATGTGAACCGTGGTTCACAAATACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096692667.1\|10107589_10108921_+\|murein-transglycosylase	unknown	unknown	gnl\|CDD\|225377
NZ_AP018255.1\|WP_096692671.1\|10111221_10111566_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690050.1\|10105968_10106154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692669.1\|10109968_10110460_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096690049.1\|10102832_10104617_-\|maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238828
NZ_AP018255.1\|WP_096692675.1\|10116968_10117400_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|227786
NZ_AP018255.1\|WP_096692672.1\|10111740_10112082_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_AP018255.1\|WP_096692666.1\|10106860_10107226_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_AP018255.1\|WP_096694518.1\|10112184_10112844_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_AP018255.1\|WP_096692664.1\|10100202_10100388_+\|cation-transport-regulator-ChaB	unknown	unknown	gnl\|CDD\|226938
NZ_AP018255.1\|WP_096692662.1\|10098388_10098688_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692663.1\|10098795_10100094_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|234607
NZ_AP018255.1\|WP_096690047.1\|10101781_10102696_-\|HNH-endonuclease	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_AP018255.1\|WP_096692665.1\|10100510_10101158_+\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	unknown	unknown	gnl\|CDD\|235067
NZ_AP018255.1\|WP_096692676.1\|10118303_10118594_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224583
NZ_AP018255.1\|WP_096692677.1\|10118583_10118931_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|225236
NZ_AP018255.1\|WP_096729177.1\|10110605_10110965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692668.1\|10109302_10109749_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692674.1\|10116568_10116877_+\|type-II-toxin-antitoxin-system-HigB-family-toxin	unknown	unknown	gnl\|CDD\|378301
NZ_AP018255.1\|WP_096692673.1\|10113107_10116275_+\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319775

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096692667.1\|10107589_10108921_+\|murein-transglycosylase	gnl\|CDD\|225377	COG2821, MltA, Membrane-bound lytic murein transglycosylase [Cell envelope biogenesis, outer membrane].	7.64171e-110
NZ_AP018255.1\|WP_096694518.1\|10112184_10112844_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	1.95937e-66
NZ_AP018255.1\|WP_096692676.1\|10118303_10118594_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.77169e-26
NZ_AP018255.1\|WP_096692673.1\|10113107_10116275_+\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319775	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase. This subfamily includes the P-type Na(+)-ATPase of an alkaliphilic bacterium Exiguobacterium aurantiacum Mna and cyanobacterium Synechocystis sp. PCC 6803 PMA1, a cation-transporting ATPase which may translocate calcium. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP018255.1\|WP_096690049.1\|10102832_10104617_-\|maturase	gnl\|CDD\|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	2.18087e-101
NZ_AP018255.1\|WP_096692675.1\|10116968_10117400_+\|transcriptional-regulator	gnl\|CDD\|227786	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription].	5.20302e-21
NZ_AP018255.1\|WP_096692672.1\|10111740_10112082_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.06195e-12
NZ_AP018255.1\|WP_096692666.1\|10106860_10107226_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	2.69217e-40
NZ_AP018255.1\|WP_096692664.1\|10100202_10100388_+\|cation-transport-regulator-ChaB	gnl\|CDD\|226938	COG4572, ChaB, Putative cation transport regulator [General function prediction only].	5.06376e-14
NZ_AP018255.1\|WP_096692663.1\|10098795_10100094_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_AP018255.1\|WP_096690047.1\|10101781_10102696_-\|HNH-endonuclease	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.14164e-50
NZ_AP018255.1\|WP_096692665.1\|10100510_10101158_+\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	gnl\|CDD\|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	1.45128e-134
NZ_AP018255.1\|WP_096692677.1\|10118583_10118931_+\|DUF86-domain-containing-protein	gnl\|CDD\|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	6.55595e-31
NZ_AP018255.1\|WP_096692674.1\|10116568_10116877_+\|type-II-toxin-antitoxin-system-HigB-family-toxin	gnl\|CDD\|378301	pfam09907, HigB_toxin, HigB_toxin, RelE-like toxic component of a toxin-antitoxin system. HigB_toxin is a family of RelE-like prokaryotic proteins that function as mRNA interferases. HigB cleaves translated mRNA only, and cleavage depended on translation of the target RNAs. HigB belongs to the RelE super-family of RNases. The toxin-antitoxin gene-pair is induced by environmental stress factors.	6.61528e-29

>NZ_AP018255.1|WP_096692668.1|10109302_10109749_+|hypothetical-protein
MIGILIDADLILEVLMNRNLLLEDISGLFDQAQPLIKMYVTDFGWEKICAYASRFQNSQIAQVVIDWLKEKIDVCAVDKNVLHQARLSPIQDFESAVEYTCAMYQEFYAVVTHRYQDFVTAPNKFAIWSVSDLQMRTSLEAQFHTTVN
>NZ_AP018255.1|WP_096692667.1|10107589_10108921_+|murein-transglycosylase
MSIKSTPRANYREFFNPKPVKILFAVALSLPVFLLTYALLTQPLGRLAVSPQQCQLKKWALPQAAGQPKSQPGISRRPVLVARPHITCCEGDNSCLDNQIWGENEPIKDSIGLIASIDQSLKYLQTPSSEAAYKDYPVAGITRARVIASLQRFRQLVQKSSAAKELNAAVAREFVLYQSIGNDKKGGVLFTSYYEPIYEASRTRTAEFRYPIYREPPDLDSWPRPHPKRVDLEGADGLQASKSKLRGLEIFWFRDRLEPYMMQIQGSARLQLTDGSETTVGYAASIAQNYKSIGKALADDGKLPLEGMTMPKILDYFHKYTQELNVYIPRDPSFVFFKENYGVTATGSTQATLTTDRSIATDKSLMPPGALALIRAYLPFPNTQGQMEHRVVSRYVLDQDAGGAIKGAGRVDYFVGAGKVAAERAGVTVGRGQLFYLMLKPKS
>NZ_AP018255.1|WP_096692666.1|10106860_10107226_+|IS200/IS605-family-transposase
MDTVVTKYRRKVFTQQMIDDMKEVFMRVLESNNSKLEDCNGEPDHVHLLIDLHPDNNISDLIASLKSASSRIFREKYKSTIDKYYWGKAKLWHDSKCIVSCGGAPLETVKQYIQNQSGGRE
>NZ_AP018255.1|WP_096690050.1|10105968_10106154_-|hypothetical-protein
MWVKVPPARFMLDSLPAHNDRTRFSEAEAGNRAQSDYRYGWTLALTGGSYGKTDAYKSNLS
>NZ_AP018255.1|WP_096690049.1|10102832_10104617_-|maturase
MRNAETVLSVIRDRGYRGLPLDDIYRQLFNPNLYLLAYSRIYKNDGAMTQGVTSETVDGMSIKKIEDLIEDIRYERFQWTPVRRINIPKKNGKTRPLGIPTWNDKLVQEVIRLILEAYYEPQFSNSSHGFRPKRGCHTALTIIDRTWQGTKWFIEGDIRGCFDNIDHKILMSILREKIQDNRFLRLIENLLKAGYCEQWKYFSTLSGTPQGSILSPILANIYLDKLDKFIEQILIPEYTRGKCRAENPEYSKLVKLAWYYRKNGQFEKARQLEIKYQHMPSKDVRDPEYRRLNYVRYADDFLLGFIGSFTEAEAIKEKVKIFLAEKLQLELSPEKTLITNARNEAAKFLGYEILVQYSDDKHTNGKRSINGIVALRIPAKVIEEKCTLYMRNGKPIHRPELINDDDFSIINIFQSEFRGYVQFYSLAQNIAWLRKLQWVMSTSLMKTLACKHKTSVNKICARYIKTVKLPQGLRKCVEITVPVEGKKPLVARFGGIQLKRNLKATIEDLSTQRKPAPRNELIKRLLADECEICGAKGNIEVHHIRALKDLKIKGRKDLPQWMQIMSARKRKTLMVCSQCHDAIHAGKPTGKRVP
>NZ_AP018255.1|WP_096690047.1|10101781_10102696_-|HNH-endonuclease
MDNLIAPSGIKQGIFRCLKAGVNPEFPEQGTCQGGVVSPLLANIALNGIEEIHQSVRYADDMVIILKPTDDATKILEKISQFLEARGLKVSEKKTKLTATTDGFDFLGWHFKVQSNGKFRSTPSADNYKKFRQKVKAIVNCSNYGAKVKAQKLAPIIRGWRNYHRFCKMDGSRFSLWHIRYRTWKVFNKETKLTRESTTKLIEKAFPSVPYSENKYVNVKGNKSPYDGDISYWSERNSKLYDGETSKALNRQNHTCGHCGLKFTSEERVHLHHIDGNHDNWKPNNLIAIHESCHDYTHMGKSAS
>NZ_AP018255.1|WP_096692665.1|10100510_10101158_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE
MFSESQSLRNAIPTDKIRYDEKGLVPAIIQDYLDGTVLMMAWMNRESLQKTLETGETWFWSRSRQEFWHKGAISGHTQSIKSIRYDCDSDAILVSVEQIGDIACHTGERSCFHQIDGSIIPPPADTLSQVFQVICDRRDNPNESSYTCKLFAGGDNKILKKIGEEGAEVVMAFKDDNAEEIAGEVADLFYHTMVALAHHKVDIKDVYRKLQERRR
>NZ_AP018255.1|WP_096692664.1|10100202_10100388_+|cation-transport-regulator-ChaB
MLYKCNQDLPVEIRSLSQECQDVYRAAFNSAVHWYGEASKAHKVARSAVRMQSAMHRSVSV
>NZ_AP018255.1|WP_096692663.1|10098795_10100094_-|glutamate-1-semialdehyde-2,1-aminomutase
MVNTTIKTTKSQEIFEKAQNLMPGGVSSPVRAFKSVGGQPIVFDHVKGAYIWDVDGNQYIDYVGTWGPAICGHAHPDVINALHSALDKGTSFGAPCVLENVLAEMVIDAVPSIEMVRFVNSGTEACMAVLRLMRAFTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPKSTTANTLNAPYNDLEAVKALFEQNRDEIAGVILEPVVGNAGFITPDAGFLEGLRELTHEHGALLVFDEVMTGFRIAYGGAQEKFGITPDLTTLGKIIGGGLPVGAYGGRRDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLQKPGTYEYLDQITKKLASGLLQVALETGHEACGGQISGMFGLFFTSGPVHSYEDAKKSDTAKFGRFHRGMLEHGIYLAPSQFEAGFTSISHTDEDIERTIAAAREVMSNL
>NZ_AP018255.1|WP_096692662.1|10098388_10098688_+|hypothetical-protein
MEFQSKIISVELMDGTVVRVEATSIGDRKIGLQTRPFSEVTGAIESLAKEISETVQKVKPDKASVKFGVEIGVDSGKLIAVLAKGTNTANLEITLEWGS
>NZ_AP018255.1|WP_096692669.1|10109968_10110460_-|hypothetical-protein
MQNLILYALCIGFIISLTAGFTNNLSYSQVSSSGSSSSDTSSTQTFTSNTSEQSNSSSIQRSSLNLSATNLKQPQILKINASHARLQGEISVNGKVVQRLNDNTTELNLSPYLSVGQQKVEISARYSPSTAAVSVEVQGSGNNISQQTSGTGTVNYTLDLSVQ
>NZ_AP018255.1|WP_096729177.1|10110605_10110965_-|hypothetical-protein
MNAMPKRILMFSLFLTAMVTLPAVNANASELNIQTSNVQMFLDEDGDIFIRTAPVSPVIVNPAVNRINRINRINRINTNRRTRAVKVNNQMKCRNVTQRSNSTRGGNQIYTRSTTTICS
>NZ_AP018255.1|WP_096692671.1|10111221_10111566_-|hypothetical-protein
MLKKSFALGMVAALAMAPAALAQGQVQRSNSRTQITNGNFGTGSVSGIDSSTYTDQHQRKNSNLFCATGNQTQASTANTDISNGNVGFRNVSGISNSTLTSQRQNANCSFPYFR
>NZ_AP018255.1|WP_096692672.1|10111740_10112082_+|helix-turn-helix-transcriptional-regulator
MKRKVKPKIAILRERAGLTQLELSRLVGVTESTIQNWESGRTGADHIERIVKFCKALDCQVEDLIEYISDSEEEKVGKPSTLSDIRNILGTEQPTGAPTQSQENAVEVQSARE
>NZ_AP018255.1|WP_096694518.1|10112184_10112844_-|polysaccharide-deacetylase-family-protein
MQFAPLYPLIYRVLQPSFPNCLWTGNTNCKKIALTFDDGPHPQYTPQLLAVLDHYQIPASFFWLGVCVQQAPQTAFKVHSRNHWIGLHGYDHQNFPMLSPQELKHSLEKTQAAIQSACNIPPQLVRDVRPPNGFFTPNTLKLLKQWDYRPIMWSVVPEDWVRPGVNTVIQRVLNQVQNGSIIVLHDGYFGGIDVAETTAALIPKLLERGYEFVTINNLY
>NZ_AP018255.1|WP_096692673.1|10113107_10116275_+|HAD-IC-family-P-type-ATPase
MNKNCNISRRRQVPIVKEINTKVKGRARYKVNGLQGSDTLKKYLELRLEDHNDISCVSANPVTGNMLVFYKPARSLSGLASLIENLVFDYQKESKNSVVLVTKVDKAKKKAKKTRSITDTKAQEVEPWHLRSADTVMQLQTSNVLGLSSDSAARKLKKYGLNTLPQSKPRSGLSMFVDQFKSLPVGLLAVAAGVSVATGGLLDAAVIMGVVVINAGIGFATESNSEKIIRSLQNIVKPTAVVIRDGNSGEISATEIVLGDIIVLKPGSYVPSDARLIEAERLSIDESALTGESMPVSKSTVTLEGENVALGDRVNMVYMGTLVTGGQGRAVVVATGKYTEMGKIQAMLGEASTPETPMEKQLDQAGSQLVVISSAICAVVFGIGLLRGNSVLQMLKSTISLAVAAVPEGLPTVATTTLALGIANMRKHNVLIRRLDAVETLGSVQTICMDKTGTITANRMTVVELCAEGRCIDVADDKLRVGNESINPYSNEQLLKLMHVLVLCNESIIEFGEVKSENKEQNYTVKGSSTENALIDLAISAGVNVNSLRENYPLQKISHRSQARNYMVTLHNTPDTNQKLVAVKGSPSEVLALCSQQLKNGQLQPLTDADRQLIENDNEDMAGKALRVLGVAYLIQESDEINTDSELIWLGLVGMADPIRKGVKELMGGFHSAGISTVMITGDQSPTAYAIGKELNLSQGKQLEILDSTHLEQVDPEVVKGLCDRVNVFARISPANKLQIVQAQQSVGKVVAMTGDGINDAPALKAANVGIAMGHTGTDVAREVADIILEDDNLETMIIAVSHGRTIYNNIRKSVHFLLSTNTSEIMVMLAATAAGIGEPMTAMQLLWLNLVTDIFPALGLAMEAPEPDVLLAPPRDPSEPIIKNSDFRRIVGESAIMSASALGAYGYAINRYGIGATASTIGFMSLTMAQLMYALSCRSQTHSIFSGKKLPQNKYLNIALGGSFALQIAAATVPGLKGLLQIAPINPVDIVVIGASAVLPFLVNEGRKEFVSRNRKNEGEYITILPHSNDKSNFSYTPTKEREFQPTVITVPSV
>NZ_AP018255.1|WP_096692674.1|10116568_10116877_+|type-II-toxin-antitoxin-system-HigB-family-toxin
MRIIKEMALKKGYEKHPNAEPGLRAWKKLVKAQEWNSFADVKATSLFNPDQVKNFVVFNIGGNQYRLITYIDYSKQIIFIRHFLTHAEYDEEKWKDDQWFDS
>NZ_AP018255.1|WP_096692675.1|10116968_10117400_+|transcriptional-regulator
MAYENSSYTNLLISFPPRPIKSEQDFEKTQSIVDKLLDKGELTEEEKDYLFVLGMLIHEYEQNLDLVPDIYGVELLKVLIEETGLKQKDLVSIFKTESIVSDILNGKRKLTVEHIQKLGEFFNISPAVFFPANSSSRDFLEVA
>NZ_AP018255.1|WP_096692676.1|10118303_10118594_+|nucleotidyltransferase-family-protein
MKRNEALNLLKSQQIKLKDFSVKSLILFGSVARDEATSESDVDLLVEFEKPVGLFTFVDLQIYLETLLGCSVDLGTPDSLKSYLRETVMGEAVRVF
>NZ_AP018255.1|WP_096692677.1|10118583_10118931_+|DUF86-domain-containing-protein
MSSRKLKQRIQDILEIGTEIGVFTQGMSFTDFQEDMKTVRAVLYNMAVIGEAAASLMPEVEVAYPEIPWVKIRAMWNIVIHEYFRVNLEIIWETIQRDLPPLLEQLQELQSRLNS

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Crispr_ID: NZ_AP018255_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_40

10220432-10220524

TypeV

A:N

Consensus_repeat	Method
GCGTCACGCACCGGCTTAAAATTGTGACT	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_AP018255_40

>merge|NZ_AP018255|40|10220432-10220524|CRISPRCasFinder
GCGTCACGCACCGGCTTAAAATTGTGACTACGAGAAAACTTCAACGTAGTAATAAGACTTAAGCGCGTCACGCACCGGCTTAAAATTATGACT

>NZ_AP018255|40|40|10220432-10220524|CRISPRCasFinder
GCGTCACGCACCGGCTTAAAATTGTGACT	ACGAGAAAACTTCAACGTAGTAATAAGACTTAAGC
GCGTCACGCACCGGCTTAAAATTATGACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096692768.1\|10225753_10226077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212525
NZ_AP018255.1\|WP_096692770.1\|10226909_10227281_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319925
NZ_AP018255.1\|WP_096692761.1\|10218577_10218760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692760.1\|10218171_10218513_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692753.1\|10208850_10210575_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018255.1\|WP_096692767.1\|10224904_10225651_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212525
NZ_AP018255.1\|WP_096692769.1\|10226082_10226736_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692765.1\|10223953_10224178_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692755.1\|10212515_10212917_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692766.1\|10224465_10224708_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692759.1\|10216071_10217745_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_AP018255.1\|WP_096692764.1\|10223267_10223906_-\|DUF4291-domain-containing-protein	unknown	unknown	gnl\|CDD\|379483
NZ_AP018255.1\|WP_096692757.1\|10213876_10214959_-\|class-I-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236431
NZ_AP018255.1\|WP_096692758.1\|10215771_10216011_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_AP018255.1\|WP_096694521.1\|10220897_10220993_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376873
NZ_AP018255.1\|WP_096692756.1\|10213632_10213818_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692754.1\|10210991_10212455_+\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200477
NZ_AP018255.1\|WP_096692763.1\|10221393_10222938_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|109787
NZ_AP018255.1\|WP_096692762.1\|10219167_10220340_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_AP018255.1\|WP_096692771.1\|10227369_10228266_+\|ribosome-biogenesis-GTPase-YlqF	unknown	unknown	gnl\|CDD\|236570

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096692770.1\|10226909_10227281_+\|glyoxalase	gnl\|CDD\|319925	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.12533e-15
NZ_AP018255.1\|WP_096692771.1\|10227369_10228266_+\|ribosome-biogenesis-GTPase-YlqF	gnl\|CDD\|236570	PRK09563, rbgA, GTPase YlqF; Reviewed.	1.82481e-145
NZ_AP018255.1\|WP_096692753.1\|10208850_10210575_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.1566e-73
NZ_AP018255.1\|WP_096692767.1\|10224904_10225651_+\|hypothetical-protein	gnl\|CDD\|212525	cd10001, HDAC_classII_APAH, Histone deacetylase class IIa. This subfamily includes bacterial acetylpolyamine amidohydrolase (APAH) as well as other Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. Mycoplana ramosa APAH exhibits broad substrate specificity and catalyzes the deacetylation of polyamines such as putrescine, spermidine, and spermine by cleavage of a non-peptide amide bond.	1.68856e-65
NZ_AP018255.1\|WP_096692768.1\|10225753_10226077_+\|hypothetical-protein	gnl\|CDD\|212525	cd10001, HDAC_classII_APAH, Histone deacetylase class IIa. This subfamily includes bacterial acetylpolyamine amidohydrolase (APAH) as well as other Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. Mycoplana ramosa APAH exhibits broad substrate specificity and catalyzes the deacetylation of polyamines such as putrescine, spermidine, and spermine by cleavage of a non-peptide amide bond.	8.16102e-28
NZ_AP018255.1\|WP_096692759.1\|10216071_10217745_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.39372e-40
NZ_AP018255.1\|WP_096692764.1\|10223267_10223906_-\|DUF4291-domain-containing-protein	gnl\|CDD\|379483	pfam14124, DUF4291, Domain of unknown function (DUF4291). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 190 and 214 amino acids in length. There are two conserved sequence motifs: VYQAY and RMTW.	1.49567e-92
NZ_AP018255.1\|WP_096692757.1\|10213876_10214959_-\|class-I-fructose-bisphosphate-aldolase	gnl\|CDD\|236431	PRK09250, PRK09250, class I fructose-bisphosphate aldolase.	0
NZ_AP018255.1\|WP_096692762.1\|10219167_10220340_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	4.58331e-55
NZ_AP018255.1\|WP_096692758.1\|10215771_10216011_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	7.83056e-25
NZ_AP018255.1\|WP_096692754.1\|10210991_10212455_+\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_AP018255.1\|WP_096692763.1\|10221393_10222938_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|109787	pfam00743, FMO-like, Flavin-binding monooxygenase-like. This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.	7.33888e-54
NZ_AP018255.1\|WP_096694521.1\|10220897_10220993_+\|hypothetical-protein	gnl\|CDD\|376873	pfam02634, FdhD-NarQ, FdhD/NarQ family. A pan-bacterial lineage of proteins. Nitrate assimilation protein, NarQ, and FdhD are required for formate dehydrogenase activity. Structurally, they possess a deaminase fold with a characteristic binding pocket, suggesting that they might bind a nucleotide or related molecule allosterically to regulate the formate dehydrogenase catalytic subunit.	1.97734e-09

>NZ_AP018255.1|WP_096692762.1|10219167_10220340_-|serine-hydrolase
MNRKTLLATGLSLIASYSGYTLITDNDQVISPALAAQLSSPKINGAQLQNMLDAAVKSQKIPGAVMYVSTPAGKWIGASGVSNLQTKTVMKPNDGFSIASMSKTFVSVAVLKLVEAGKIDLDGVITEYLPTDISPNITNSDLITVRQLLNNTSGVAEYLSTDGFKNATKKRPRSKPWTAREAIKYIYNADALSAPGNKFIYTDSNYILLELIVENVTKNTLAHAIRTSILQPLALKHTFTELREPVVGNPATGYGNRNKDGKLESFANVNDGNGLGDGSLISNAEDIANFASALFGKKTLLSPKMLSEMLVMKNENEIGNGYGLGVEKFQTSQGMFVGHTGSAYGFNTLMAYSPKRNTTLVVLFNSQSSNVKTLAFKAADSALNNIALKK
>NZ_AP018255.1|WP_096692761.1|10218577_10218760_-|hypothetical-protein
MINTTIYSVICHPDSIFTVFCTESKGWQFRVISSLGTVYGDDKSYCTQVAAERAGRKWLK
>NZ_AP018255.1|WP_096692760.1|10218171_10218513_+|hypothetical-protein
MKIDLNSVDFSDISQKSVDLDTLETEDEFRAEARRLLPTALVKVGEAVAEQTWEELQKTLLKPGSKAKSSTSEKRQFVKETGRNYQRSASNRDKQEIEDYIVEQLRIFQKKAI
>NZ_AP018255.1|WP_096692759.1|10216071_10217745_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQVAYKFKLRPKQGQVELLEDWQHKVGYIQNRSLGDRIVSYNNTFVMGDYCDLYTQREISTLNLYCDINLYSINCIPNIVSPLHCSVSKSASFGNIWKEDKPSLRRSKDKEKPFNPKRSTYEMHSNWITEFKQANPEFKNVNADAIQQALRHVDGAFNKFFSGKAGFPNFKQHIDVSFEFKPGTVRIINKYIIFPTLGGMRFFKSREIPPSWEIRTVTISREVDGWYVSVLLRDETVPDLPIKCLEECESIQGVDVGIKKLASLSDGTLISNPQFLKKSERRLRIRQRRVSRKQKGSRKRKKAAIQLSRLHQKIRRQREDYQWKQAKIIGAKADITVFEDLNIKGMKSRCKPKKDEATGKYLKNGQAAKAALNQAISDASWYSLRQKTEHQAQKLGNLIILVHPKNTSITCPECGHTSKSNRDKEKFVCENCSHCDDADVNGAINIAKKARTNLGLDTLQVDSLKVTPKNTKESSFSLGDEPGNPANSTAKQLRCVTVKSVKVKKERVRNKHKSSQPEPPEIGIQRDKFTSLDGDDGELARTDSSESVPILQGSWAR
>NZ_AP018255.1|WP_096692758.1|10215771_10216011_-|IS200/IS605-family-transposase
MSTKILPGGTVYNLSIHLVLVRKYRRKVITGNVLRRLQEICEDLCKKWDCQLVEFNGESDHCHLLIDINPKVRSLCVCQ
>NZ_AP018255.1|WP_096692757.1|10213876_10214959_-|class-I-fructose-bisphosphate-aldolase
MTTTMASPSSIESVLGQEAEDLLTYKAKVSKELLHLPGPNFVDSVWLSSDRTPQVIRSLQTLYSTGRLAYTGYMSILPVDQGIEHSAGASFAPNPIYFDPENIIRLAIAAGCNGVATTLGVLGAVSRKYAHKIPFIAKINHNELLTFPNQFDQVMFGDVEQAWNLGAVAVGATIYFGSENSTRQIQEVSKAFKRAHELGMATILWCYLRNNAFKQDKDYHLAADLTGQANHLGVTIEADIIKQKLPECNNGYGAVEKATGKSYGKTNEKVYTDLTSDHPIDLTRYQVLNCYCGRAGLINSGGASGKNDFAEAIRTAVINKRAGGTGLISGRKTFQRPFEEGVKLFHAIQDVYLSEDVTIA
>NZ_AP018255.1|WP_096692756.1|10213632_10213818_+|hypothetical-protein
MIKFSDLSRKSASFNVALANMELHFANFSKSDRLLLIIVSAGISLGVGETVDLLFLPSLRY
>NZ_AP018255.1|WP_096692755.1|10212515_10212917_-|hypothetical-protein
MPLNESLRQYPTAYGNTTYSNSNQDIYTSVNANTYERDSFNQKKLEPSTLSDSIILFAPVLFVLTTVGIVFYRFKQVKTVSLPCKKCKYYDSNNYLKCAVNPAEVMTEKSKDCRDYTAQERKFSWSWKGFNKR
>NZ_AP018255.1|WP_096692754.1|10210991_10212455_+|glycoside-hydrolase-family-13-protein
MQIQTPDWVKHAIFYQIFPDRFARSKQPRKRLLHEARWEDWEAMPTLQGYKGGDLWGIIEQLDYIQSLEINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHARDIKVVLDGVFNHSSRGFFFFHDVLENGPHSPWVNWFKIEGWPLAPYTGDAPANYGSWGGNRALPEFNHDNPEVREYIMEIAEYWIKFGVDGWRLDVPFEIKTPGFWEEFRDRVKAVNPEAYIVGEVWGDSRQWLDGKQFDGVMNYLFAGPTIAFAAGDRVALDQVQSRDYKPYPPLFAAEYAQKIQELLELYPWEIQLTQLNLLASHDTARLLSIAGGDIPSIELCTLLLMTFPGAPSIYYGDEVGLPGALDPDSRRGFPLEAAWNREILDTHRQLITLRHKYPCLRTGDYKVLYAQGEVYIFARSLDNEQLVIAVNAGTTDSKTNLDVSNLHSLPNKVLYGGAEIDWNNESETKQLTLNIPARTGCIVGNY
>NZ_AP018255.1|WP_096692753.1|10208850_10210575_-|WD40-repeat-domain-containing-protein
MNWTSLLKSQQVDFLTRVKKPKTYEVSLLESSVKGCHSEIMAFKGEALTKLLQKARQQAELAAKNPPPVPPEYPEPPDWTIPFPNYFKEQALYYLLREQIVERVMHERLGKLVKKVPHDVLTSIALDDEGNLRSESKFSYALTSNPRFSIQVYVADGESFNGIKKDKIKWTVTQDDLKNHQLLIFLCLFYPSTGKHGDEKQVVMAGFLPTELIESGEPKITVVPSKLLYAGGLNWYLDSFTIKDEQAESDEIMLVETVQVASHSLRDYACEWEYWQTLRGHTRGINCLAFTAAKDMAPLLATGSLGEIKLWDLNKGELVCTFSEQPWSKSGLVDEINALAFSSDGQIIVSGGADSTIKIWHVGARDLIDILHKHNGMVRGVACSPDNRMIFTGGDDRRVLYWDLRLRQVYSSLSLDDTAAHALVLSRDGKILVTGSYRKIKVWRLLGEETRLESSFSAHSHVVSCLCLSCDNKVLISGSRDHSIKVWSLAGELVRVLKGHSDGVCAVALSPDGKILASGSVDKTIKLWDLHSGEMLATFIGHADAVTGLTFTASGEILISASLDKTIKIWQRGL
>NZ_AP018255.1|WP_096694521.1|10220897_10220993_+|hypothetical-protein
MSIAQEFGITLIGFLRGNRFNVYSRIKRLLT
>NZ_AP018255.1|WP_096692763.1|10221393_10222938_+|FAD-dependent-oxidoreductase
MAIQRVCVIGAGISGLATAKTFIEAGYEVLVYEKQSALGGVWEKSRRYPGIITQTPGQMYSFPDYPLPDSYPEWPSGEQVNAYLESYANHFGVSEKIQFSTKVIALTAIENGHQGWEVTTRTLDGSTITSYFDFVVICNGVNHIPNIPEIPGINEFKLKGGTVLHTTEVESTAQLKGKDVVVVGFGKSACDIVMLAVQHASSCHIVFRKPDWKIPRFFFGFVNFKLLMMTRFTEAMTPKYNPNKLEKWLHSNGKRLVNGFWRLQETIMRYTFGLDTCGLVPSEPLIKSVIASINIAPKNFYKYIRNQKIVTHQTSITRFVEDGVELASGEKLNASIVVFGTGFKQAIPFLEEKYRHHILDLDGYFHLYRNLIHPKVPNLAFVGYNAGLSATLTSDLGALWLVQLLKGNINKPTNNKMVAEMEADLEWRKKNGYAGYGGTCFFSSTFHYLDNLMRDMGLPPRQTGSIAAVMQPLNTQAYSNVRTQLESLYGSKVQDSTNKSQLQSNVSVTEAPTY
>NZ_AP018255.1|WP_096692764.1|10223267_10223906_-|DUF4291-domain-containing-protein
MKLLTEPYLEQVKRLPLSGRHILAQFDQDSVVVYQAYNVNIGKFAAQHGYFGGEFLFDRMSWIKPSFLWMMYRSGWGTKVNQEVILAIWIKRSAFDEILAKTVPSSYIPELYPSREEWQLAVKRSDVRLQWDPDYDPCQKPVERKAIQLGLRGEMLARYAKDFILDIEDVSEFVHGQYPNRLVRNQENLLVPSQSVYSVDNLTTIKRIGLLH
>NZ_AP018255.1|WP_096692765.1|10223953_10224178_-|hypothetical-protein
MGTYTYDDEDDSESGELIVFNNTATLCDKWIPPVPVGVGGVVFNSKGNAIVATSKAIVELNIKSSLSATLALPV
>NZ_AP018255.1|WP_096692766.1|10224465_10224708_-|hypothetical-protein
MNNEINAVELSNDELDTVAGGLAITLGDVGGFASDASNSYSLKQLTVGQQTFAGPTGSGTASVTNLVDIFSTAGQAIAAK
>NZ_AP018255.1|WP_096692767.1|10224904_10225651_+|hypothetical-protein
MKAILTPYFEANGPLRMLHRGQFISHYDVAQRGQQVYLGLLEAGCAVEIVSPSKLGESNLHQSILSIHDAKYIKYLQGAWANWSKLQNASSEILPNISPNRHMDRFNENPVALAGWYIGDAAAPIGENTWQNALGSVGAVIEAASQLKSGELAVYALCRPSGHHACQDMAMGMCFLNNVAIAAQVLRQKFKKVAILDIDMHHGNGTQQIFYGRDDVLTLSIHGDRPTFIHFILALNKKLAPPKEKELT
>NZ_AP018255.1|WP_096692768.1|10225753_10226077_+|hypothetical-protein
MRIFLFFLCVLCAFVVLHRDLIFHFAVRNAILEFGAQALIVATGFDTFKDDPLGYFKLDSSSYYAIGRVIHSLKLPTLFVQEGGYFVAALRENVQQLIVGFEIIIDI
>NZ_AP018255.1|WP_096692769.1|10226082_10226736_-|hypothetical-protein
MKNFKDILNEALDPTTAPNILAEYYKMSSTLLEKESFLKAIATNPNTDKNTLKEIFISEAGMANEIILNNPVTPLLVLENARIFEDWIVKCHKKIFAEELCDELIEVAIKTKNIHVYTKLAESKHTTARTFAALVANIKPFLDYNDIDYQMDQINNLSYGYYNVAIMKNQHVDVETLYELIRQTNKRRLIHQNYSKSIRKWLFHLFPIPYRINSQVN
>NZ_AP018255.1|WP_096692770.1|10226909_10227281_+|glyoxalase
MVLELKHSLVTIASNNLETLVIFYTNLLGKPKSYVPNIYAEFDIPGIILGIFKPKAAHEEEFKNATQSKMSLCLEVNKLEDAIAHLTNLGYPPPGTITTASHGREIYAYDPDGNRIILHQASK
>NZ_AP018255.1|WP_096692771.1|10227369_10228266_+|ribosome-biogenesis-GTPase-YlqF
MGITQNYKLNTIQWYPGHIAKAEKQLKEQLKLVDVVLEVRDARIPVSTHHPQLLDWIGSKSRVLVINRFDMVLPQTKHVWTQWLKQQGEVPYYTNAQHGQGVPAVVKAAQVAGVELNERRKSRGMLPRPVRAVVIGFPNVGKSALINRILGKRVVESAARPGVTRSLRWVRISDELELLDAPGVIPLKLENQDAAVKLAICDDIGDASYDNQLVAAAFIDIITYLEAVAPQLLPKQPLNERYKLDPTDQTGEGYLHALAEHRYKGDVERTARQLLTDYRKGFLGQIPLEIPTQFSGEE

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Crispr_ID: NZ_AP018255_41

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_41

10389858-10390189

Orphan

A:N

Consensus_repeat	Method
TGTTCGCTGTGAAGTTGCCA	PILER-CR

4 spacers

The CRISPR arrays of NZ_AP018255_41

>merge|NZ_AP018255|41|10389858-10390189|PILER-CR
TGTTCGCTGTGGAGTTGCCAAAAATCTGAACACTAATACTGATTTACTGAAAAAGTTGGCATTTGATATTGACAACCATGTTCGCTGTGAAGTTGCCAGCAACCCTAATACTCCTATTGATATATTAGGAAAACTATCAAAAGATACTAATAAATTTGTTCGCTGTGAAGTTGCCAAAAATCTAAATACTAATACTGATTTACTGAAAAAGTTGGCATTTGATATTGACAACCATGTTCGCTGTGAAGTTGCCAGCAACCCTAATACTCTTATTGACATATTAGAAGAACTATCAAAAGACGCTGATGAATATGTTCGCTGTGAAGTCGCCA

>NZ_AP018255|41|10|10389858-10390189|PILER-CR
TGTTCGCTGTGGAGTTGCCA	AAAATCTGAACACTAATACTGATTTACTGAAAAAGTTGGCATTTGATATTGACAACCA
TGTTCGCTGTGAAGTTGCCA	GCAACCCTAATACTCCTATTGATATATTAGGAAAACTATCAAAAGATACTAATAAATT
TGTTCGCTGTGAAGTTGCCA	AAAATCTAAATACTAATACTGATTTACTGAAAAAGTTGGCATTTGATATTGACAACCA
TGTTCGCTGTGAAGTTGCCA	GCAACCCTAATACTCTTATTGACATATTAGAAGAACTATCAAAAGACGCTGATGAATA
TGTTCGCTGTGAAGTCGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096692900.1\|10390755_10391313_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692893.1\|10385292_10385619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692899.1\|10390194_10390548_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694532.1\|10394695_10395724_-\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_AP018255.1\|WP_096692896.1\|10387361_10388774_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|214724
NZ_AP018255.1\|WP_096692906.1\|10399297_10399498_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692897.1\|10388824_10389307_-\|YbjN-domain-containing-protein	unknown	unknown	gnl\|CDD\|341119
NZ_AP018255.1\|WP_096694533.1\|10398205_10398556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096694531.1\|10386223_10386691_-\|gluconokinase	unknown	unknown	gnl\|CDD\|225804
NZ_AP018255.1\|WP_096692905.1\|10398669_10399230_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692904.1\|10397156_10398020_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|132483
NZ_AP018255.1\|WP_096692889.1\|10381997_10382645_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692890.1\|10383065_10383329_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP018255.1\|WP_096692903.1\|10395940_10397182_-\|ergothioneine-biosynthesis-protein-EgtB	unknown	unknown	gnl\|CDD\|274581
NZ_AP018255.1\|WP_096692892.1\|10384858_10385248_+\|(2Fe-2S)-ferredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239278
NZ_AP018255.1\|WP_096692901.1\|10391299_10392418_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_AP018255.1\|WP_096692895.1\|10386903_10387125_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692894.1\|10385874_10386180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096692891.1\|10383635_10384604_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_AP018255.1\|WP_096692902.1\|10393542_10394604_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|226985

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096692904.1\|10397156_10398020_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|132483	TIGR03442, TIGR03442, ergothioneine biosynthesis protein EgtC. Members of this strictly bacterial protein family show similarity to class II glutamine amidotransferases (see pfam00310). They are distinguished by appearing in a genome context with, and usually adjacent to or between, members of families TIGR03438 (an uncharacterized methyltransferase) and TIGR03440 (an uncharacterized protein). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	7.95043e-106
NZ_AP018255.1\|WP_096692892.1\|10384858_10385248_+\|(2Fe-2S)-ferredoxin-domain-containing-protein	gnl\|CDD\|239278	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.	1.26851e-12
NZ_AP018255.1\|WP_096692890.1\|10383065_10383329_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.55802e-21
NZ_AP018255.1\|WP_096694532.1\|10394695_10395724_-\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	1.16529e-167
NZ_AP018255.1\|WP_096692903.1\|10395940_10397182_-\|ergothioneine-biosynthesis-protein-EgtB	gnl\|CDD\|274581	TIGR03440, egtB_TIGR03440, ergothioneine biosynthesis protein EgtB. Members of this family include EgtB, and enzyme of the ergothioneine biosynthesis, as found in numerous Actinobacteria. Characterized homologs to this family include a formylglycine-generating enzyme that serves as a maturase for an aerobic sulfatase (cf. the radical SAM enzymes that serve as anaerobic sulfatase maturases). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	8.37711e-135
NZ_AP018255.1\|WP_096692896.1\|10387361_10388774_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|214724	smart00563, PlsC, Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.	1.84209e-06
NZ_AP018255.1\|WP_096692901.1\|10391299_10392418_-\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	6.18159e-18
NZ_AP018255.1\|WP_096692897.1\|10388824_10389307_-\|YbjN-domain-containing-protein	gnl\|CDD\|341119	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins. This family includes protein T110839 from Synechococcus elongatus that is structurally similar to type III secretion system (T3SS) chaperones (T3SC) that bind effector proteins, and is homologous to YbjN, a putative sensory transduction regulator protein found in Proteobacteria.	3.89533e-38
NZ_AP018255.1\|WP_096692891.1\|10383635_10384604_+\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	9.19096e-111
NZ_AP018255.1\|WP_096692902.1\|10393542_10394604_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	3.06382e-71
NZ_AP018255.1\|WP_096694531.1\|10386223_10386691_-\|gluconokinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	3.49599e-72

>NZ_AP018255.1|WP_096692897.1|10388824_10389307_-|YbjN-domain-containing-protein
MTSYQTNLDAAPSSVDALLTESTSINHVEVIENVIDTLEQDDSAMVSQPPEGGYLWKFKYGSVEVFVQLTGTSDDDTITVWAVVLQLPAKDEPLLMRKLLEMNCSSTLESRFGIIENQVVVLGKRTLAELSAGDVSRLITIVATVADNNDEALKSEFAAS
>NZ_AP018255.1|WP_096692896.1|10387361_10388774_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MSEEIKSVQPPLKFIVPRFNRFFLQIVRWLLPVLLRFRLRRWLPARIIRVETENTLELAKLYEQFQAGKVRFLLAFRHPEVDDPLSMLYLLSRGVPYSARSSGIKLKEPVHSHFIYERGMTIWAGNWLGEFFSFLGGFPIRRGKRVDKTGLQTARNLFLNSNMPIAVAPEGATNGHSGKVSALEPGVAQLAFWCIEDLKKANRLEEVFIVPVTIQYSYPNPPWKKLDWLLSKLEAMSGLEAISTESSKSKEEIYYQRVLRLASHLLTEMEEFYQRFYHQTLIPINIDSEAANEIIIARLHRLQDIALGVSEQHFGLQAQGTFIDRCRRLEEAGWSYIYRDDLPALETLTPLARGLADFAATEAAKRLQHMRLVESFVAVTATYIKDKPTFERFAETILLMYDMMSRLQNDTFPGRPNLGWRQSKVTVGQPISVTQRWETYKKDRQGARTSVSELTLDLHKALQTMIDQQT
>NZ_AP018255.1|WP_096692895.1|10386903_10387125_+|hypothetical-protein
MSDSDFFNEALDALYKAAKASANFIETALTSKDTDFSPGDKERLKVALSVLEITWCDEEDDENSESDEDDISF
>NZ_AP018255.1|WP_096694531.1|10386223_10386691_-|gluconokinase
MGVSGSGKSTIGKLLADTLDYEFHDADDYHPQFNISKMQQGIPLTDADRIPWLEILQALIHKWLLEHRSAVLACSALKASYREYLNGNDEIKIVYLFGSYETIEARLKRRQNHFMPSNLLQSQFNTLEEPANSIKVDISSSPEIIVQQIRAQLSI
>NZ_AP018255.1|WP_096692894.1|10385874_10386180_-|hypothetical-protein
MKLNWFTGIMPRQKLDRASLHARVDPQTSEALKQIAYKLGYIYDGEGSTGQLLDAIASGQHVIIPQSLYLKMVDVFNEMSNNIKCGKNTSSHTNPYKKETE
>NZ_AP018255.1|WP_096692893.1|10385292_10385619_-|hypothetical-protein
MALAYPVCWRIIKRDIYSGRAGWGFERPKFLANITDVKTPENFNSVDWENFFGTTKSKVVTELFRINGGKPGYYLANLLEHKYYYCGESNEDLRIKFLELGIGSVEPS
>NZ_AP018255.1|WP_096692892.1|10384858_10385248_+|(2Fe-2S)-ferredoxin-domain-containing-protein
MDSPKYRVFVCTKQRPENDPEGCCCNAGALDVYQTFQDEIQKRMLHERVEVRRSGCLDHCEAGAVAMVYQPNRNEFSWLPTKLQVKLRRLLFPNRHVYGHLTRDSVGAIVESHFVKGQPLKRCQISTAE
>NZ_AP018255.1|WP_096692891.1|10383635_10384604_+|carbohydrate-kinase
MSNPRVLCLGEILFDLLADQLGRELSTVESWTPYPGGAPANVACALVKLGVSTGFVGCVGEDEPGNALVKLLNDIGVDTTGLQRHQAPTRQVYVVRSLTGDRTFAGFGNYDTSEFADTRLNAKKLPPSLFEAADILVLGTLELAYPESAASVHHALDLAEKYDMKIVLDVNWRPVFWHNPEEAPGIIRQIFKKVDFVKLAKEEAEWLFDTSDAGAIKYRLDSVEGVLVTDGENGCAYCLDENEGKLPSFSVPVVDTTGAGDSFLAGFIHQLLAHSTQSLKDKETVRDIIRYASAVGALTTLKPGAIASQPTPSEVEAFLAGQ
>NZ_AP018255.1|WP_096692890.1|10383065_10383329_-|response-regulator-transcription-factor
MATGESQTPVSLSDRELQIIDLVANGLTNQDIAAKLEISKRTVDNHISNILTKTQTDNRVALVRWAMRWGKVCLNDVNCCTLPNQPD
>NZ_AP018255.1|WP_096692889.1|10381997_10382645_-|hypothetical-protein
MNTRASLQCNSNPLNIIDLDFITPQPNQDSELLELLHFIPGLKEILMLRQVHALEHATVWLLSQPRASRLPFPSSNFQVDNESLGGLSTEQGFFLYGDVNISDLRRAVTNGLQRLKNGEWDLAVHPRCGTNVSAEMLLTAGLALGMHFIMPRGIIEQLVGLGIAATTAAELAPNVGALAQRYLTTSVPFNLSIESITITRDMWGREAHFVKVQWQ
>NZ_AP018255.1|WP_096692899.1|10390194_10390548_-|hypothetical-protein
MLDSGARRPVSIKEISFVPYEKVDLENGLYGEWLLQQLNSFEGLLSESLEIRKQTVNKIRGKDDVWTELQGSVYAPFIEDSQNAIRSLRSSIDDCAYLLSLERGAAMLADQIALWSI
>NZ_AP018255.1|WP_096692900.1|10390755_10391313_-|hypothetical-protein
MSQRRVQIVILCEDRQQEVFARYFLKKRGFNGLFRTKICPPSSQSGEQYVRTQYPVEVKAYRQNRNRVSVGLVVIIDADTSTPQERLDWLARTLALDSQESRQPSEAIAIFVPKRNIETWIHWLQGETVNEEDAYSKFPNSEADCKPYVENLVEQCRSQNLSEQAPPSLQLACSELQRLLQLLKL
>NZ_AP018255.1|WP_096692901.1|10391299_10392418_-|AAA-family-ATPase
MLKRIYIDNFRCLVNFELQVDTINLFLGANGAGKSTVFEVLQKIQLFISGDSKIETIFKSKHCTRWQISKIQRFELEILANGGIYKYELGINHENQDKCRVEFERLWFDNQLLLKFESGNVEIFKDNYTRESQYSFNWSQSVLPSLLPKADNSKIIWFKEKISRFIIVRVIPSLMHSESHQEETHLTSQMENYVSWYRYLSEDQGKVAELGSILKEVLEGFKNFKFERVSEQSLVLKLRFSGVDSTKTIDYRFGELSDGQKTLIALYTLIHCTKSEDYTICIDEPENFLALSEIQPWLIQLYDLCSERELQALIISHHPELINYLLASPVGYWFERQSNAPVRVNHIGNEVSNNSALPVSELIARGWLNESA
>NZ_AP018255.1|WP_096692902.1|10393542_10394604_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MFVQAVSSRDVRQLGINPNHWYVVARSCEVNTQPLGVTLWKQAIVLYRNSAGKIHALEDRCPHRQVKLSHGKVINNTIECAYHGWRLNENGNCVEVPYLAENQKLPSCKIRRYPVQEQDGFIWLFPGDVETNHVTSLQPQPMGLPEWEHLNYIATVSVINCKAHYSYLIENLMDMYHGHLHEDYQAWAEAELQDIDENQNRVDAHYTAQSYYKIDKIWSISQLFFKKLRRLHPEPLDVSYVYPHWTSTLGQDFKIYCLLCPISETETKAYLIHFTSLNAFWRLHKLPIWFRRFIKDSLFGAAQKLLDGLVVQDVKMIEEEQLAYLQNPERKNYELNRALVSVQKLMQSQISNG
>NZ_AP018255.1|WP_096694532.1|10394695_10395724_-|L-histidine-N(alpha)-methyltransferase
MTISNNNSSQVMQQQIEKRLLIQHLRSITEALTTTAGSDVVKGLTQIPKTLPPRYFYDDRGSELFEQICELPEYYVTRTETAILQECASQIAEITQECELVELGSGSSTKTRILLDAYQNLGLPLRYLPIDVSAGMLENSAKQLLFDYPTLEISALAGTYELALQQLPAKQLPSRMIAFIGSTLGNLNPQECEMFFYQITQALHPGEYFLLGVDLQKPKHILEAAYNDSQGVTAAFNLNMLEHINWLYNGNFDTAQFEHFAFYNEAQNQIEMHLRSKQQQTVKLNALNLSVDFARDETIMTEISRKFDVETIKQQLRAHNLETQTVWTDKNNWFGLLLCQLQ
>NZ_AP018255.1|WP_096692903.1|10395940_10397182_-|ergothioneine-biosynthesis-protein-EgtB
MILELSKSSLRDYFIRGFQECRAQTLELLDSLDEETFCCQAHPDFSPVGWHLGHIAYTESLWLLERGAGLDSIYPQYRKLYAADGLPKSERVKLPSIEETRNYLNAVREKVIDYIKVVDIESQQRLWRFLLQHESQHCETACIVLKLISPLTPPTASPLPLNPESQMIKIPAGEFEMGSNSDDTLDNERAAHLVYLDTYFIDRYPITSGKYREFMESGGYKDAQYWSDAGWKWLQLEQVKQPLYWCNDGAYDNHPVMGVSYYEAEAYAKFVGKRLPTEAEWEKAARWDEQANRSRTYPWGEQEPTQEYCNCATSLNIYQTTPVNAYPKGQSAYGMYDALGNVWEWTNSWFDAYKGFEYYPYIGYSQVYFDNQHKVLKGSSWATRQECTRASFRNWYYPHVRQIFAGFRCASSL
>NZ_AP018255.1|WP_096692904.1|10397156_10398020_-|class-II-glutamine-amidotransferase
MCRLLAYIGTPVNLEPLLCEPEHSLIVQSYKPREMLQGTVNADGYGIGWYGSKSAESKVLSAEESSTLSTQHSVLSTDKDLEPFIYKSIIPIWNDTNLESISRYVESNNILAYVRSATSGQALDMSNAQPFKYKNLSFIHNGRVEKFKKTLYRPMRKNLSDEIYSWIGGTTDSEHIFAMILNHLTTNPDKTIEQALHVTLLELQEMALSYDTCVMANLVISDGKRLVASRYAVKQPAPTLYWVKNDQNFPASVIIASEPLFTGNWQPVPENSIISVGEDCDIRIEQI
>NZ_AP018255.1|WP_096694533.1|10398205_10398556_+|hypothetical-protein
MSNAIAVIFPYRHNGTWVFDDERVGLVQEPFVSGVPEMIDILVKDISNLDEGFKLLFSANPFPGYQAELIWLREEYNGHWYLWGEKKLEGWLCPALFKYFETQPNRIYCKAESLYR
>NZ_AP018255.1|WP_096692905.1|10398669_10399230_+|hypothetical-protein
MAPIKKFTLLLIVTTLTGLVISAFDPTIAQKPPVQRQKTCKTWQDVKSQIQIIYMGSTGNSVIPDMPKGFQNGCVYGDYGAYTISLYVLKDDFKPRNIRLDKERLLDSSILRINGADPNIERQIKRGNILHFFNVCASTGTANFCKGIPKDASYTKNGLTCLQNLCIQATGVPETELVTIWNNAKK
>NZ_AP018255.1|WP_096692906.1|10399297_10399498_-|hypothetical-protein
MNDNSVFTIFIVFGCIWVLMGVGAVIGLMKMDGQEIKFSKTALVVAIPIIVPIIITLTYAAIRGTF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP018255_42

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_42

10702223-10702313

Orphan

A:N

Consensus_repeat	Method
AGTGCGCTCGTGCGCTCGTGCTGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018255_42

>merge|NZ_AP018255|42|10702223-10702313|CRISPRCasFinder
AGTGCGCTCGTGCGCTCGTGCTGAGTGATGAGTGATGAGTGCTGAGTGATAAGTGATAAGTGATGAGTGCGCTCGTGCGCTCGTGCTGAGT

>NZ_AP018255|42|41|10702223-10702313|CRISPRCasFinder
AGTGCGCTCGTGCGCTCGTGCTGAGT	GATGAGTGATGAGTGCTGAGTGATAAGTGATAAGTGATG
AGTGCGCTCGTGCGCTCGTGCTGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096693259.1\|10702886_10703306_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NZ_AP018255.1\|WP_096693236.1\|10681779_10682868_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_AP018255.1\|WP_096693247.1\|10694503_10694881_-\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_AP018255.1\|WP_096693242.1\|10691034_10693806_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_AP018255.1\|WP_096693269.1\|10710755_10710920_-\|rubredoxin	unknown	unknown	gnl\|CDD\|238372
NZ_AP018255.1\|WP_096693267.1\|10709397_10710648_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|272992
NZ_AP018255.1\|WP_096693258.1\|10702485_10702887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096693251.1\|10697123_10698305_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|234600
NZ_AP018255.1\|WP_096693264.1\|10708567_10708819_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379337
NZ_AP018255.1\|WP_096693271.1\|10711282_10711735_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096693253.1\|10698766_10699264_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_AP018255.1\|WP_096693238.1\|10682895_10684344_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|236461
NZ_AP018255.1\|WP_096693262.1\|10705564_10707826_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_AP018255.1\|WP_096693255.1\|10699687_10700956_+\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	unknown	unknown	gnl\|CDD\|223691
NZ_AP018255.1\|WP_096694548.1\|10704814_10705138_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237428
NZ_AP018255.1\|WP_096693245.1\|10693999_10694497_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_AP018255.1\|WP_096693249.1\|10694985_10696083_-\|response-regulator	unknown	unknown	gnl\|CDD\|381129
NZ_AP018255.1\|WP_096693266.1\|10709037_10709373_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096693240.1\|10687483_10690663_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_AP018255.1\|WP_096693261.1\|10703386_10704643_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096693259.1\|10702886_10703306_+\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	1.59958e-07
NZ_AP018255.1\|WP_096693236.1\|10681779_10682868_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.0167e-50
NZ_AP018255.1\|WP_096693247.1\|10694503_10694881_-\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.05059e-39
NZ_AP018255.1\|WP_096693242.1\|10691034_10693806_-\|GAF-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	4.97199e-62
NZ_AP018255.1\|WP_096693267.1\|10709397_10710648_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	7.42542e-172
NZ_AP018255.1\|WP_096693251.1\|10697123_10698305_-\|alanine-racemase	gnl\|CDD\|234600	PRK00053, alr, alanine racemase; Reviewed.	0
NZ_AP018255.1\|WP_096693264.1\|10708567_10708819_+\|hypothetical-protein	gnl\|CDD\|379337	pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1.	0.00358917
NZ_AP018255.1\|WP_096693253.1\|10698766_10699264_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	2.45342e-33
NZ_AP018255.1\|WP_096693238.1\|10682895_10684344_-\|AAA-family-ATPase	gnl\|CDD\|236461	PRK09302, PRK09302, circadian clock protein KaiC; Reviewed.	1.62088e-78
NZ_AP018255.1\|WP_096693262.1\|10705564_10707826_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	4.7114e-49
NZ_AP018255.1\|WP_096693255.1\|10699687_10700956_+\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	4.94404e-74
NZ_AP018255.1\|WP_096694548.1\|10704814_10705138_-\|hypothetical-protein	gnl\|CDD\|237428	PRK13564, PRK13564, anthranilate synthase component 1.	0.00889085
NZ_AP018255.1\|WP_096693245.1\|10693999_10694497_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	9.34719e-32
NZ_AP018255.1\|WP_096693249.1\|10694985_10696083_-\|response-regulator	gnl\|CDD\|381129	cd17602, REC_PatA-like, phosphoacceptor receiver (REC) domain of PatA and similar domains. Nostoc sp. (or Anabaena sp.) PatA is necessary for proper patterning of heterocysts along filaments. PatA contains phosphoacceptor REC domain at its C-terminus and an N-terminal PATAN (PatA N-terminus) domain, which was proposed in a bioinformatics study to mediate protein-protein interactions. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays. Some members of this group may have an inactive REC domain, lacking canonical metal-binding and active site residues.	7.23781e-46
NZ_AP018255.1\|WP_096693240.1\|10687483_10690663_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	1.92944e-145
NZ_AP018255.1\|WP_096693269.1\|10710755_10710920_-\|rubredoxin	gnl\|CDD\|238372	cd00730, rubredoxin, Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.	1.94047e-23

>NZ_AP018255.1|WP_096693255.1|10699687_10700956_+|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA
MQLNSSLSQFESLNLANDSHPEDTDLDIEPLIRQPANAITGDVSVGQQRNHCLAHQKSEELIQTLMGRRHERHLIVLQDFPDPDALSSAWTYQLIAQQYDIKCEIIYGGTLSHQENIALVKLTGLPAQRWTPPTLKTKDLSSYHGFVLIDNQGTTSQLLSAVVQAKLPLIAVIDHHSLQGELKAEFTDIRPSVRATATIFTQYLQTGLLTLDNSNSQHIKCATALMHGLRSDTNRLMQAQEEDFMAAAYLSRFYDAQLLNAVLQANRSKRVMDVIERSLKNRIVQNNFSIAGVGYLRYDDRDAIPQAADFLVTEENVHTAVVYGIVHDEDDELEVIIGSLRTSKLTLDPDEFIKEAFGQDSSGRFFGGGRTSAGGFEIPMGFLSGGNENSAYARMKWEVYDSQIKQKLLRLVNPKDNPIQSE
>NZ_AP018255.1|WP_096693253.1|10698766_10699264_+|HNH-endonuclease
MGKVLVLNASYEPLNITSWRRAAILLIKGKAEQVEHNGKFLYADFPLPTVIRLRHYVRVPYKEIPLTRRNILHRDGHSCQYCGYTGDELTLDHVIPRSRGGGDSWENIVTACVRCNVKKGSRTPQEAHMPLRHTPRRPYSSLYFEVSKHLKTGTHKEWQKYVIGL
>NZ_AP018255.1|WP_096693251.1|10697123_10698305_-|alanine-racemase
MLSNEHFLGIAHEERNTYSWMQQRAWVEIDLGAVSHNVRQLRKLLAKQTQLMAVVKANAYGHGAVTIAKVALSSGASWLGVATVPEGIELREAGITAPILLLGAAQTVEQIHAIVNWKLQPTLCSPRQALVFSDTLEAIDYDSSLPVHIKLDTGMSRLGTNWQEADEFVKLVTRLPRLSVASIYSHLATADSPDPTIMNLQHKRFEAAIAKIKALGIAVGCLHFANSAGTLVSSELHYDMVRVGLAIYGYYPATHLHNVNLKPVLQVKARVTQVKTIEAGTGVSYGYKYIAPHDIRLAVVGIGYADGIPRNLSNKMQVLIRGKRVPQIGAITMDQIMLDVSSIPDIQENEIVTILGQDQGTQITADDWAKELNTIPWEILCSFKHRLPRVAVE
>NZ_AP018255.1|WP_096693249.1|10694985_10696083_-|response-regulator
MSTTPLDSYRVFQKLHPLSLLAQLTSRRATGCLKVLTGAISWSLYLEEGKLTYASYSNQLFDWLDGHLERLSKQIATLNRSTRMQMRLLFEPKHINQSIAQADYQAICWLVNRNYMTKEQAAVLVEELALEVLESFLTLKEGSYEFSRETALDDLPKFCRLDLRVLVEQCQRQLRSRYSYSAPDVVAHVQSAPSQYDAQPINSVEQQISSNIDIETNTEVDNNINVETNTIGSSNQFSHRQLRKRVYTVACIDDSPTVLSSIKRFLDENTFTVVMINDPVKALMQILRSKPDLILLDVEMPNLDGYELCSLLRRHSSFKDIPIVMVTGRTGFLDRAKAKMVRSSGYLTKPFTQSELLKMVLKHIS
>NZ_AP018255.1|WP_096693247.1|10694503_10694881_-|response-regulator
MTLTMLSTILIVEDSPSELELMSHYLKESGYTVIQATGAKEALQKAAAQKPDIIVTDVVMPGMSGFELCRALKRNPNTEKVPIVVCSSKNQEIDRLWAMRQGADAYITKPYTRDELLLAIKSLFL
>NZ_AP018255.1|WP_096693245.1|10693999_10694497_-|purine-binding-chemotaxis-protein-CheW
MNTPKLPLSAPENLSTLGDGYLKFQVNQQTAAVISMLHTQEAIVVPVESITSMPGMQECILGLMNWRSRIVWVVDLPRMLNLESIETRLRQYNVIIIRVDTILLGLVVDDILGTTKFGSDDIHSPIGQVASSLVPYLRGCVMQQQEMLLVLDAQAIVHSSVLKAD
>NZ_AP018255.1|WP_096693242.1|10691034_10693806_-|GAF-domain-containing-protein
MFNKTDTAKSSDTQKKPLTLTESNKDVITNNKLVLHSNQSTITENNKSNDSLAGKFKKLSLRSKATIIAIAIGTLPVLGFGILSYLIASQSIQNKVSQLQQSETEGLADKLNRFMIERYANVQVLAELPAFANRKVRESLSTQEKQAILDKIIDTNKVYDNVAVVDLNGNVIVQSQGSTLPANLGESSYIQAVKQSKRPFISQPQVSPPSDKLSIYTVAPVKDNVTQETIGILRANIPVQSLENVIANYGEGDRQYGVADANGKLFIAAQKNQIGKSINDKLGGDQLVTYASRTLQGLPDLKWKTLLATSKATAFEAQRQLLLTTVLGTGLTALLTAALAYWLAKRATEPILNATAAVARLGEGELNTRLEVERDDELGVLGANINQMAEQMQALIKKQEFDADRAKVLAQITLKIRQTLQYDEITKTAVREIRQVLSVDRVVFYQFNLQTLEGTIVAESVVAGYPKMTGVEIDDPCFREKHAETYKDGRVRVIYNIYNDPSLKNAACYIKMLEKFVVKANLIAPVISQKQLIGLLIAHQCDSPRQWHSSDIELFKQLAIQIGYAVEQAQLLETVEKGKMVAEKSTEEERHQKEALQMQLLELLSEVEGAACGDLTVRADVTAGEIGTVADFFNSIIESLREIVTQVQQTATKVNDSINLNSGAINKLADEALEQASEINRTLGAVDSMTKDMQAVAQNAQKAASVANTARNTAAKGGQAMDMTVQNILSLRETVGETAKKVKRLGESTQQISRVVALINQISMQTNLLAINAGIEAARAGEEGQGFIVVAEEVGELAARSAAATKEIEQIVENIQRETSEVVQAMELGTTQVVQGTHIVEDAKSSLSQILEVSRQIDTLVQSISNATASQVETSNTVSELMKQIAASSQHTSTSSRQVSQSLQQTVAISEQLQSTVDTFKVN
>NZ_AP018255.1|WP_096693240.1|10687483_10690663_-|hybrid-sensor-histidine-kinase/response-regulator
MSQDKEHEIQMQFLEEATDYLNTLEGVLLEIDSNRIDIDKINAALRAAHSIKGGAGMMGFRVLSDLAHRIEDSFKVLKTKRNSVSVDTELQSLLLTGVDWLRQIVDLHSQNSNLDSEWLATFCYPVFDELHERLGDPNEEDASTILSSEDGQDIIPLLFQTEVEGCLERLESMLADNQPQSLQEEVSIMAAELGGLGEMLQLEPFSRLCESVTQHLEYAEEAHIPTIARAALLSWRRSQALVLTNQIESLPSELELEVAAASNAIPAINDTEIIEHIPEEITEEIPEEILQEIPEEILQEISQKIPEEIGADQTAVTQVESSWLEDEVLSADFEALEAAFAIESAAAEFEEVQLIESADAHNFIGEEYQDYQLHNLGETTERKVEQPEKAREREQENTVRVPSKQLEQINDLFGELVIQRNGLNLQLERLRKLVRNLNQRVQVLERENQYLRAAYDKISTRASEHFNTQPTVISEVPSYFAASQELEDSLEFANGNEVQSIEHRFDALEMDRYNELNLLSQEVMETIVQVQEVTTDLQLSLDDTDNISRKLNKTSKQLQRKLTQVRMRPLSDILDRFPRALRDLCIEYGKNVQLKIEAGNTLIERSILEALNDPLMHLVRNAFDHGIEDPASRVSAGKSEQGIIEIKATHQGNRTIITVRDDGRGIPLNKIRNRALAMGLDETLLSAATEEELLSLIFEPGFSTSEQVTALSGRGVGMDVVRNNLKQVRGEVKVSTLLGEGTTFSLSVPFTLSVARVLLVESNRMLLAFPTDVVEEIFLSQEDLVYQMGSGEVLNWQGNMLPLIRLGKYLEFNCPRFDNPNLETAPAINAESVLIIRGNNQPVAVQLDKTWGEQEVAIRLVEGNIPLPPGFNNCTILGDGRVVPLVNASELLYAIAVNERTPRNQQLPSARLKTPFLNSSQQKPARAPKNQKGTILIVDDSINVRRFLALTLEKAGYKVEQAKDGQDAIEKLQTGLAVQAVICDIEMPRVDGYGFLGRVRSNTDFKGIPVAMLTSRSSDKHRQLAIQLGARAYFSKPYNEQELLRTLEDIIFPMAGATK
>NZ_AP018255.1|WP_096693238.1|10682895_10684344_-|AAA-family-ATPase
MSENRLSTGILGLSEVLYGGYISGCSYLVRGGPGTGKTTLGMHFLTAGAANGESVLFITLAETIAQLRRTASGLGFDIQGVSFLDLSPTSDFFSRVQTYDIFSPAEVEREPTTRAIIDSVENLKPQRIFIDSMTQFRYLASDTFQFRKQVLSFLRFLVEKGTTVLFTSENSEEAPDDDLQFMSDGVLHLNFSNDARSLSVSKFRGSGFQDGHHAIRLTSTGMHVFPRLVPAAHKQALTTGVVSSGIPEIDEMLHGGIERSTITIISGPSGVGKSTLGLQFMKEAAGRGERSVIYTFEESRETLLRRAEGINIAVHAMQDRGTLSIVQVEPLYYTPDEFAYLVRQEVEQHQVRIVMIDSISGYRLSVRGSDLTSHIHALCKYLQNMSVAVILINEIETITGEFRVTEIGISYLADTIVFLRYLEMHGELRRTIGVLKKRMTDFEKTLREFEISRYGLKVGKPLTQLRGILTGVPEFLKNKPTQ
>NZ_AP018255.1|WP_096693236.1|10681779_10682868_-|hybrid-sensor-histidine-kinase/response-regulator
MSRILIFVEQPENRRLLAEWLGHHHEIIVGESVVQQGKALPLLNETFDLCIVDGQALTHLWEWVEARKLKEQPVFLPFLLITLRSDVKLLTRHLWRTIDELITKPIEKLELHARIEMLLRSRQLSLQLQMALEQERTLKEQKLRFVSVVSHEFRSPLNTIFGFSRLLEKPDLANERRADFLHRIQAAIKRMVVMLDDVLILSKTEAGRFASNSAPLAIVPFCQKIIEEIKYSTSTGHTIKFNCEDECVTVYMDETLLRHVLSNLLSNAIKYSAPDSTVELKLQCQQETVIFEVRDEGIGIAAADLERLFESFYRASNVGNIPGTGLGLAIVKQAVEQNGGVISVNSEVNVGTTFTVTLPLNT
>NZ_AP018255.1|WP_096693258.1|10702485_10702887_+|hypothetical-protein
MTAPTEIRERAIALLDQLPRESLLRAVEFLEALSYEALQVSEAPKSEVDEAALLQVIQKRLPLEQRERLDYLRQQNENGEITETEHQELLIYIDRVEQQDAERVEALIQLAQLRSCDLKILIDEFLPKYSNIV
>NZ_AP018255.1|WP_096693259.1|10702886_10703306_+|HNH-endonuclease
MPKISVLMRRIVAVRAGGYCEYCCCSEQYATESFTVEHIKPKQAGGETVLENLAWSCCGCNAHKHSKIKGLDLETREKIALYNPRHQLWSEHFEWSDDFTQVIGKTPCGRATVDALHLNRFGVVNLRRLLRSANLHPPE
>NZ_AP018255.1|WP_096693261.1|10703386_10704643_-|hypothetical-protein
MAPNPSIMRAVEQLGYRVTVGDVATQVGLNIGQANQGLLALASDAGGHLQVADTGDIVFLFPKNFRDILRNKYFKLRLQEWWNKVWSILFYIIRISFGIFLVASIALITIAIFLIITAMSNRDGGDSGGDWGSGGGIFYFPDFWWFLSPNYDTHYLERRREKRELNFFEAVFSFLFGDGNPNANLEERRWHSIATVITENRGAVVAEQISPYLDNIGAQYQQEYEDYMLSTLTRFNGQPQVSPSGEIVYYFPELQVSAVKKRRHAIASYLEELKWKFSAADSGQIMLSAGLGIANFVGALVLGSLLRGGVVAAKLGGLVGFVQGIYWLLLAYGTGFLVIPLIRYFWIQWRNNKITERNSLRISRAKLLTSMSQELQNKINFAQQFAAQKFISDENLAYSTETDLLDQEVKRLEDGDQD
>NZ_AP018255.1|WP_096694548.1|10704814_10705138_-|hypothetical-protein
MALFLAIILWSGLFAKTASSQLIESRLNNLEANFNRLESRLANLETQTNRTPPSQGRIPTLPPTTPARRTTTQSQRDQMFDRLATLVVETKQQVNRLEQRVKKLEAR
>NZ_AP018255.1|WP_096693262.1|10705564_10707826_-|polysaccharide-biosynthesis-tyrosine-autokinase
MAINGVEQEQLATISSLPPVDIRQLFKILLRRRFLILGVTGIVMSAAGILAILAKPNYQSSMQLLVQSNLYTGAKLSSNQTDANNDTGSNVEVVDYNAQSQLMLSNQLIEKAVAMLRPDYPDIKFEDIKGTKGKKSPLTVARVESGSTINRTPSHQVFEIKYKNHDPIKTKRVLQMLLKVYRDYNIEQQKQRLTKGMAFVDERLPKVKSSVVTAEDNLEAFRKKNNILDPEAQSKIILETLAETQKQLQTTRAQLQNVQARYAALQQKLAVSPSSAMISSRLSQSTRYQTLLNEIQKTELALARERIRYTDNSPVVQKLVQQRENQLGLLRQEITRTLADQTGKKASQLGNSEIDAAVNQALNQSTSNESLLNEGQMAEVDIKLTEEMIQVQTIVQGLEANEKSLSQSEKRLQSELGKYPGLIAEYNRLLPEVQTNRKTLEQLMQAQQSLSLKLAQGGFDWQMLEAPERGVYIGSGRKLILSGGAVAAPIIGIVVALILEMLNDSIYTSHELQRITNLRLLGIVPKLTKNYRRKRTLLPAHSTSALLTDSPVAVASLLSHENLDMAYQNIQILNLPLPYKSLMVTSACFGEGKSTVTLGLAVSSARTHHRVLIIDANLREPSLHKYLELQNEWGLSLLLVDEAHATFKDYIQPIHPSIDVLTAGPFLEDTVKLLSSRRMKELLNEFEQSYDLVLVDAPPILSTVDARILATLCNAIVIVARLGQITRAELAQTTEILENLNLIGIIANQATNI
>NZ_AP018255.1|WP_096693264.1|10708567_10708819_+|hypothetical-protein
MQRAKAQLRTKVKKVLFVSVLALIEQFYKYLLQKDSEYKLYVLGANSSQKILRQGCNNIIISRFVEDLNPYFERARLGIVPLL
>NZ_AP018255.1|WP_096693266.1|10709037_10709373_+|hypothetical-protein
MTDYNNERLDWTEAALDRQVDVNADLRASVEILQNRNESLQATVADLRFKVEALMSIALQQQKNFSIVAEELKQQKLDIAQLTKFQCNTNQAIDKIGIILEKMVTHQSNVK
>NZ_AP018255.1|WP_096693267.1|10709397_10710648_-|NAD(P)/FAD-dependent-oxidoreductase
MRPLRIIVIGGGAAGFFGAIAAARTNTLAEIILLEAGGQLLSKVRVSGGGRCNVTHACFDPKVLTQNYPRGSKALIGAFTKFQAQDTVTWFNKHGVQLKTEADGRMFPTTDSSETIVDCLMQTAKHVGIRICTGTPVVSVNKLSKGFEVVLKSGDTLEADRLLIATGSNPVGYKIAQSFGHAIESPVPSLFTFNVRDESLRQLAGVSVNPVKLRLTIPSEGQLEQTGALLITHWGVSGPAVLKLSAWGARVLHSSKYQANLSVNWLPQLGQEELRQKLLAVKDEVPRRAVLLHRGVDIPHRLWQYMATRAGVDTETRWAELSKKHLNLLIQELTQGQFIVNGKGVFKDEFVTCGGVQLKEVNFKTMESKLIPGLYFAGEVLDIDGVTGGFNFQSAWTTGYLAGSAIANERQSNHEN
>NZ_AP018255.1|WP_096693269.1|10710755_10710920_-|rubredoxin
MQKYICIVCGYEYDPEAGDPDSGIEPGTPFEEIPQDWVCPVCGATKDQFEKIES
>NZ_AP018255.1|WP_096693271.1|10711282_10711735_+|hypothetical-protein
MIPEFDENGNLPLGVHWAEWDEFQERFSYNRRRQSLMEGLTLAMQELREAGCSIIYIDGSFTSSKTNPGDFDCCWEESGVNANELKLLAPTIYNFALQRTQQKSKYKGEIFPANFPANETGTLYIDFFQFDSRKDISKGIIALDLTRWKP

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Crispr_ID: NZ_AP018255_43

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018255_43

10949304-10949461

Orphan

A:N

Consensus_repeat	Method
ATTACTACCACCACCACCACCACCAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP018255_43

>merge|NZ_AP018255|43|10949304-10949461|PILER-CR
ATTAGTACCAGCACCACCACCACCACCTAAAACTAAGCGACGTGCAGAAGCAACTGAGAAGGCGGCACCACCATCACCACCATAGGGTAGGGCACTGTGCCAGGTTCTACCACCTTTACCACCAATACCGCCATTACTACCACCACCACCACCAGCAT

>NZ_AP018255|43|11|10949304-10949461|PILER-CR
ATTAGTACCAGCACCACCACCACCAC	CTAAAACTAAGCGACGTGCAGAAGCAACTGAGAAGGCGG
CACCACCATCACCACCATAGGGTAGG	GCACTGTGCCAGGTTCTACCACCTTTACCACCAATACCGCCATTACTAC
CACCACCACCACCAGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018255.1\|WP_096693602.1\|10946781_10947108_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_AP018255.1\|WP_096693609.1\|10959727_10960306_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NZ_AP018255.1\|WP_096693593.1\|10940680_10943236_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|368641
NZ_AP018255.1\|WP_096693583.1\|10935217_10935667_-\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_AP018255.1\|WP_096693597.1\|10943889_10945809_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341295
NZ_AP018255.1\|WP_096693617.1\|10964763_10965339_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224380
NZ_AP018255.1\|WP_096693606.1\|10955635_10956205_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|227063
NZ_AP018255.1\|WP_096693619.1\|10965738_10966791_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_AP018255.1\|WP_096693591.1\|10940605_10940713_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235000
NZ_AP018255.1\|WP_096693615.1\|10964052_10964283_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_AP018255.1\|WP_096693605.1\|10954052_10955501_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|273634
NZ_AP018255.1\|WP_096693587.1\|10937715_10938963_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224144
NZ_AP018255.1\|WP_096693589.1\|10940434_10940581_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235000
NZ_AP018255.1\|WP_096693595.1\|10943272_10943704_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223727
NZ_AP018255.1\|WP_096693613.1\|10962187_10963255_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_AP018255.1\|WP_096693585.1\|10935663_10937082_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_AP018255.1\|WP_096693599.1\|10946440_10946782_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375906
NZ_AP018255.1\|WP_096693611.1\|10960752_10962063_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236947
NZ_AP018255.1\|WP_096693621.1\|10967088_10967898_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018255.1\|WP_096693608.1\|10956291_10958808_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018255.1\|WP_096693602.1\|10946781_10947108_-\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	3.08854e-23
NZ_AP018255.1\|WP_096693609.1\|10959727_10960306_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	5.32952e-20
NZ_AP018255.1\|WP_096693593.1\|10940680_10943236_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|368641	pfam05860, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	1.51334e-21
NZ_AP018255.1\|WP_096693583.1\|10935217_10935667_-\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.50881e-65
NZ_AP018255.1\|WP_096693597.1\|10943889_10945809_-\|AMP-binding-protein	gnl\|CDD\|341295	cd17640, LC_FACS_like, Long-chain fatty acid CoA synthetase. This family includes long-chain fatty acid (C12-C20) CoA synthetases, including an Arabidopsis gene At4g14070 that plays a role in activation and elongation of exogenous fatty acids. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
NZ_AP018255.1\|WP_096693617.1\|10964763_10965339_-\|hypothetical-protein	gnl\|CDD\|224380	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	0.0026044
NZ_AP018255.1\|WP_096693606.1\|10955635_10956205_-\|DUF11-domain-containing-protein	gnl\|CDD\|227063	COG4719, COG4719, Uncharacterized protein conserved in bacteria [Function unknown].	5.59303e-34
NZ_AP018255.1\|WP_096693619.1\|10965738_10966791_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_AP018255.1\|WP_096693591.1\|10940605_10940713_+\|hypothetical-protein	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	1.53649e-15
NZ_AP018255.1\|WP_096693615.1\|10964052_10964283_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.99281e-08
NZ_AP018255.1\|WP_096693605.1\|10954052_10955501_-\|DUF11-domain-containing-protein	gnl\|CDD\|273634	TIGR01451, unnamed_protein_product, conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.	6.82478e-10
NZ_AP018255.1\|WP_096693587.1\|10937715_10938963_-\|AAA-family-ATPase	gnl\|CDD\|224144	COG1223, COG1223, Predicted ATPase (AAA+ superfamily) [General function prediction only].	2.98101e-31
NZ_AP018255.1\|WP_096693589.1\|10940434_10940581_+\|hypothetical-protein	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	1.05941e-21
NZ_AP018255.1\|WP_096693595.1\|10943272_10943704_-\|hypothetical-protein	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	0.00115055
NZ_AP018255.1\|WP_096693613.1\|10962187_10963255_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	2.40419e-157
NZ_AP018255.1\|WP_096693585.1\|10935663_10937082_-\|GAF-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	7.68453e-56
NZ_AP018255.1\|WP_096693599.1\|10946440_10946782_-\|hypothetical-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	1.93195e-27
NZ_AP018255.1\|WP_096693611.1\|10960752_10962063_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	1.26118e-169

>NZ_AP018255.1|WP_096693602.1|10946781_10947108_-|DUF433-domain-containing-protein
MTLQRLESELLALTPNEKAQAIQILAQSLGNPWRGIEKTPGVCGGDACITGTRIPVWVLINARNLGISEAQLLKDYPTLSATDLINAWVYATVYPEEIATAIAENEED
>NZ_AP018255.1|WP_096693599.1|10946440_10946782_-|hypothetical-protein
MASLYADEQFPYEVVEHLRDLGHDVLTVQEAGKANLKISDNEVLSFASSNQRAILTLNRKDFKRLHRSQPNHAGIIICTDDASRSALAQRIGAAILVSEPLAGKLISVVRPVK
>NZ_AP018255.1|WP_096693597.1|10943889_10945809_-|AMP-binding-protein
MTDKYSFSQIEQNQMEGLVSYADLQSLPGMWEIVAKQFKDVTALIDPHVKPQVTFTYEQLYYQIQQFAIGIQTLGFTEDSEDSELQRIALFADNSARWIIADQGIMMAGAANAVRSSGADKHELLYILEHSGSVGLVVENIKTLKKLEPEVYSTKIRWIVLLSDSEEQINSDVRIINFSQLMELASNSNFKEVKLNRTQLATLIYTSGTTGKPKGVMLTHGNIIHQLNAITALIQPAVGDKTLSILPTWHSFGRAGEYYFLSQGCTQVYTSRRYLKQDLQEYKPQFIVSVPRLWESIYEGIQKSAREKPPGMQKLINNFLATSGRFIKAVRTWKGLDLQNLNPTRAEIMTAWTTTILLAPLHFLGEIIVYKKIRQATGGKIKQIICGGGSLAQYLEDFFEIVGIDILVGYGLTETSPVLSSRRHYKNLRGSSGLPIAATEIKIVDPETRQTLPPQQKGLIMVKGPQVMKGYYQNPEATSKAIDDEGWFDTGDAGWLTPDNQIVLTGRSKDTIVLSNGENIEPQSIEDACLRSDYIDQIMLVGQDNKFLGALIVPNFEALKAKLNQNTDLNSSQVRDLFREELNRESRLRPGYRRDDEILVFELIQEPFTIENGLLTQTLKIRRNVVTERYKDIINKMFR
>NZ_AP018255.1|WP_096693595.1|10943272_10943704_-|hypothetical-protein
MGQGCNAAFEDVVIFNTLLDEYLDNWAEALPQFTLRRKPDAHALVELSDNASPMSGTLLFYEFFIRIRFGQILHQLFPKRFPKPLFQLASETTIPYSEILNTYQNWITRVKRSNKRQMVKSFRLEWNFSVASHTMLYCFCKNI
>NZ_AP018255.1|WP_096693593.1|10940680_10943236_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MLVKYFRAFVISCITASSLVASFTVKSLAQINPDTTLPNSSSVTVQGNTSIIEAGTTQGNNLFHSFKEFSVKNSSKAFFNNAANIQNIITRVTGQSTSNINGIIKANGGASLFLINPNGIIFGENAKLEIGGSFIGSTANAIQFGNLGTFSATNPLEPTPLLTINRSALLFSQVQASLIESNSVAPSGNNPSNAFTATGLRVPDGKSLLLVGADVNINNGGLYAFGGRVELAGLAGTGIVALNKNGDNFSLSFPNVNKSDVSLSNNATVNVRAGNDGSIAINAHNLILTGSSQLLAGIQNGLGTDNGKSGNIDINTTGTISFTNSDIFNNVEANTLGYGGDINIKTNILKLEDGADVSAITFGAGTGGDLKIYADKIEVIGASNDGYSSRIITKAESTATGAAGNLTIKTNQLLIQNGGQVDALTFGAGRSGDLKINATSSIELTGINTVDNRFPSGLFVEQGTKGATGNAGSLTINTPVLRVLNGANISASTFGAGNSGDLKIDADKIEVIGTSSSGSASIINTEAGATATGAAGNLTIKTNQLLTQNGGQINAITLGAGRGGDLKIDATSLIEAIGINNVDNKYSSGLFVQQETKGATGNAGNLTINTPVLRVLDGANVSASTFGSGAGGNLKIDARIIEVIGASSNSSSSKITAQANLNATGAAGDLTIKTNQLLTQNGGQISASTFGAGAGGDLKIDATSLIKLIGVNIVDSTFPSGLFVGQNTKGGTGNAGSLTINTSVLQVLDGANVNASTLGAGTAGDLKIDATSSVELRSVNMVDSSFSSGLFVQSTEGATGNAGNLTIKTNQLLVQDRARIATRSVGTGTAGNLTINAKSINLKEINRTTAT
>NZ_AP018255.1|WP_096693591.1|10940605_10940713_+|hypothetical-protein
MDWEYFSEPEPYLNNRKIFFPRGKVLGGCSSINFF
>NZ_AP018255.1|WP_096693589.1|10940434_10940581_+|hypothetical-protein
MTQYDYIVIGSGSAGCVVANRLTEDSQTTVLLLEAGEPDTKPEIHIPA
>NZ_AP018255.1|WP_096693587.1|10937715_10938963_-|AAA-family-ATPase
MHIQQLITEALNLSNNAIAYHISQELAAIYPKKVLIEGNDSTFNLERYAEANLCQIQYDSSIHNQIMTGWDGMENYLYKYAENAKYEVQWQDNKLDILLMSWQEGYCKIRYYWILADNKELAERFFAAVCDWNSEIRDEVLVFEDGCWAKNHELFQSIKSATFDNLILHGNLKQNIKDDLTNFFVSQEVYADYDIPWKRGILFIGSPGNGKTHTVKALINYMQQPCLYVKSFKSEYDTDSENIRKVFKQARQSAPCILVLEDLDSLLTDENRSFFLNELDGFAANEGIVTIASTNHPERLDPAIRDRPSRFDRKYHFELPDNSVRQAYIELWNNQLKTAIRLAPENVNQIAMMTDGFSFAYLKELFLSSMVRWMGIMTSTRIEEIMVSQIAILKEQMNSITASSEDNKELETENT
>NZ_AP018255.1|WP_096693585.1|10935663_10937082_-|GAF-domain-containing-protein
MNPEILAKLLPLCRDEAAFEQMKQILAGSFQHYEQSITKANFLVEQQKALFRVITRLREPLDLETIFQATATEVRQLLKADRVGMFRFYPNSGWDDGEFVSEDVDPAFGSAMAQKIHDHCFGEQFAAHYQKGRIQAVADIYDYGLSDCHIQILSQFQVRANLIVPLLLGQNLWGLLCIHQCSAPRNWHSTEIEFVSQIANHLGVALQHAELLAELRVEIMERQQAEQRVQDLNQGLRQAIIDLELVNKELEAFSYSVSHDLRAPLRSIDGFSLALLEDCLDQLDATGQDYLRRIRSATQRMGQLIDDLLTLSRVTRSDMHFKPVNLSMLASRICNNLQHQSERQVEFVIQPNLSAQGDNNLLQVLLENLLNNAWKFTSKHPQARIEFGAIYEQDGTKVYFVRDDGVGFDMTYSDKLFGPFQRLHGMHEFPGNGVGLATVQRIVHRHSGRVWAEGDVEQGATFYFTLAQEAET
>NZ_AP018255.1|WP_096693583.1|10935217_10935667_-|response-regulator
MNVTASNKSILLVEDNPDDEALAIRALKRHHIANEIVVAHDGVEALDYLFGTGIYIGRDISIKPTVVLLDLKLPRIDGLEVLRRLREDERTKLLPVVVLTTSNEEQDLLSSYSLGCNSYIRKPVDFIQFSDAIRQLGMYWLLMNEVPPT
>NZ_AP018255.1|WP_096693605.1|10954052_10955501_-|DUF11-domain-containing-protein
MSLLITKRQWISTAFLITYIITISEAKAGVLQNTATYTFKNGDGVEVSGETNQLKQELVDPLGRIRGCGGEVLPEYTGFSAGLYEASSNDTLSGIVALTRTGAGTNFTGLAPNLQNANPFFLTNEEPKGGFNFLLNRNTGQIDVGKRYILVINPPAGSTQYSQRQIRIVFTGRDDVAKTVSYTATALDGKAIAQDGDPTSYSTTVPVQDANTTGLTLSAIGLLDRAICVGVSQPIQITKTADRAAAEPGDTVIYRLLVKNLNNVGARQVSIADVLPAGFTYVPNSARAELGGNKITVNTSSQNSNLTFNINETIPPEGAVNLVYAVKITPDALRGNGENLASVSARRNDNNAQLRDGPSRYRLKVRSGIISDCGTLIGRVFEDKNFDGEQQTGEPGIKNAVVILDDGNRITTDNKGLFSVANVLPGSRTGVLDLRSVPGYKFARNEKFRERNSQSRLVRLEPGGLARMNFAVTPVNQQAGGK
>NZ_AP018255.1|WP_096693606.1|10955635_10956205_-|DUF11-domain-containing-protein
MKKGLYIAGFGIAAVIASLLPVANQPAIAQLLNSGATFAQNILQQPKVNLNLVADKKQLQKDAQGKQIVSWKALDSKVVVLPGDVIRFTVTGKNEGNKAAKNMNVTQPIPQRMVYVLNTAKASSNANTTFSIDQGKTFVATPIVKVSLPNGKIEERPAPAEKYTHMRWNFNQELQPNTSVQAAYEVKVR
>NZ_AP018255.1|WP_096693608.1|10956291_10958808_-|hypothetical-protein
MKTRRDTYFRRFLAASLLVSSSFGAILPVLAQVASGTEIKNTATATFSDGTNTYNATSNEVVITVAEVAGITITAQTPSVTNPNAGAQVYVDFVITNTGNDPTQFFIPGIATLTGTAATGSAVGTLQIMAVNGTNLSTPVNVPGAGGSTGTLLANNSISPTIGAGGTITVRVPVTVAPGATQGQTINVTLGEIANPADPTKTQNLDRTGNENQTKDVYTVDNNNGQGGETNATAPINGVREAMTTSSTITVNARLQAFSTVLKAVSHTPGAPNDISDDILTYGLALKVESPSTLPSGLVASDLYGTALRVDGFNTTPYVLVSDAIPTGMKLGTATPNTPNNNWKVVYTTDALSVNALNANWSTTRPTSGTITRVGFVYDTNTNGALRKGEPAITGFNFTVTPDTGFTGGQVANIAQTFGQSQPGSPVSGTATQIVYDESGDKTPNNGLGGANPDPSGQSGANGGITDGKANPTVDGTDPGTGTDPTAANTNTGTDGNGNGTKSNGGETNVYTIAATPLNGPFGKPGATGPTSPTDPTGTNSDFTNKSIQGINKPSNQSLTDAETPEITFNNTVKNTSGSPQEIILLPTPPTGADTLINGTKVTITADGKTASYTYTNGAFVFDSGVPVKITVSVADPNDPTKGIAQYTVKVNLPDAPQFTGYSVPITAFVDVDGNGQFNNEPSNVTIDRVYTNYLKLEKKARLLEANGNPVAGAAGNFTTDQSILAAAATPGRIIEYQITYTNVSTTGGTDSVTLPANNLVITENGTTGNNTWFSLTVDPQYQIQQSGIGTATSSAGTINVNIAANSTVNDIQTYTNTVTTVAPGSAPGTFSFRRKIK
>NZ_AP018255.1|WP_096693609.1|10959727_10960306_-|single-stranded-DNA-binding-protein
MNNFILMAEIISEPQLRHTQDGLEISEMMVQFPGSRPDDPPSMLRVVSWRDLAKEVHQNYHQGDRVLLEGRLGMNTIDRPEGFKEKRAELTLQKIHSLDGSAPLTSVTTIERTPAAANNTKTNTASTSRQTAANNTSSYNEAPSKAPATKKSNVGVMPEEDSNQYATPATKNYEPSTYPAQPVETDEDDIPF
>NZ_AP018255.1|WP_096693611.1|10960752_10962063_+|ATP-binding-cassette-domain-containing-protein
MAQVILENVYKSFPQRKGDASAQVKDNINKSDAARTEGVSVLRRINLTVADGEFMVLVGPSGCGKSTLLRLIAGLETMTGGNISVGDKLVNDLPPKERDIAMVFQNYALYPHMTVYDNIAFGLRRRSLDNLEDGDKSNSSFVENFLVSATRKLPKGLRYLSEKEKSIDQQVKNVAQLLQIEALLKRLPKQLSGGQRQRVALGRAIARNPQVFLMDEPLSNLDAKLRAETRAQIVKLQRQLGTTTIYVTHDQTEAMTMGDRIAILNQGQLQQVAPPLELYNRPANRFVAEFIGSPPMNFIPVKFQAPQIITNGDFRMTLPEIWGATLQKYDGKTVILGIRPEHLIVGVPATKNLPAQVDLVENLGNDTYLSTQLIIPGFQRQSFSNTSLQVRIPPDRSIKMGEQIWLSLTPEKLHFFDPETELAIYPKTSPTLPFEK
>NZ_AP018255.1|WP_096693613.1|10962187_10963255_-|glutathione-S-transferase-family-protein
MTKTISPPNPVTLVTPQPKKGKSLPSGFIIRFGKFVWSTMWHIMMSQLAPRSKSGAYVRPESQFRDTVNNDSKYKPEAGRYKLYVGLGCPWAHRTLVTRAIKGLESTIQVSIVSPDGNTGAWVFNEEEEGCQTVPELYNLAQPGYKGRSTVPILWDTLSKTIVNNESAEIIVILNSQFNEFAVNSELDLYPVELRTSIDTWNDKIYHAVNNGVYRCGFAQTQEAYEQACNELFTMLDEIDAALEKSRYLCRNTVTLADVRLFTTLFRFDAVYYGLFKCNRRHIQDYQNLGAYLRDLYQIPGVGETCDVESVKRDYYGNLFPLNPGGIIPSGPDITNLLEPHNRELKKYSFDVKEK
>NZ_AP018255.1|WP_096693615.1|10964052_10964283_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNYPYSMVIEWSDEDSCYLVHLPEFPWQQYHTHGETYEEAAKHGQEVIESLIEWYQEQEKLLPEPITLSKKALEVA
>NZ_AP018255.1|WP_096693617.1|10964763_10965339_-|hypothetical-protein
MTNQPQSTEARLTRLETLFSNVGEIVAVQSQTINIMTANISQLTLDINNLRETAVAQGDRIDTMAANISQLTGDVSRLTGDVSQLTGDVSRLSGDVGQLTLNINNLSEQTDRRINSLSDTIDVLVANISQLTENQNNLSEQTERRLSNLAEQAAQDRQQAAIDRQAWQAEIQRIWQYLLQQGGNGNGRQGT
>NZ_AP018255.1|WP_096693619.1|10965738_10966791_-|tRNA-2-thiouridine(34)-synthase-MnmA
MKKVVVGLSGGVDSSTAAALLHNQGYDVIGLTLWLMKGKGQCCSEGMLDAAKICEQLGVPHHVVDIRDVFQTYIVDYLVTGYSAGITPLPCSQCNKTVKFSPMLHYAKENLDCDTIATGHYARIQFNPDTARYELIRALDRNKDQTYFLYDLAQDILSSVIFPLGELQKTDTRRIAAEHELETADKPESQDLCLVESNGSMRAFLDKYLAPKEGDIVDMDGKVLGKHDGTHHYTIGQRKGLGIAAAEPLYVISIDAVNNRVVVGDRTKATKPECTVHRVNWVSIAEPSTPIRAEVQIRYRSAPVPVTVIPLENSRARIVFDEPQFSITPGQAAVWYDGEKVLGGGIIEQF
>NZ_AP018255.1|WP_096693621.1|10967088_10967898_+|hypothetical-protein
MSSALPNQFKFNQAPISKLTKLQLVVLPLLFLVPTPAVAQERLPLLPINQETYSVPPVNNGDGRSFDFQAPLQPQYNQGAPIPQYNQQYNQGFERYSVIVDASGYNAQLLPVVKRVEPTAYIRNFGGRSVIQAGVFSRQQNALQRIQELLASGIGFSNVRVFNNNGQEISLTPNGGGSVGGGSYGNVSQNNSSSYYVAIPTRSEDFYQVEQTVWRSLGQYVNYIGVQRRNQPRGAHIAVGPFAERGQAEQWNAVLRNAGLGNARVYYGR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NZ_AP018255.1	3672800-3672830	0	1.0
NZ_AP018255_12	12.3\|3740367\|26\|NZ_AP018255\|CRT	3740367-3740392	26	NZ_AP018255.1	3740861-3740886	0	1.0
NZ_AP018255_12	12.5\|3740457\|26\|NZ_AP018255\|CRT	3740457-3740482	26	NZ_AP018255.1	5016321-5016346	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	6208214-6208239	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	6392696-6392721	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	10097243-10097268	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	2973132-2973157	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	4230681-4230706	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	5016322-5016347	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	6795392-6795417	2	0.923
NZ_AP018255_12	12.7\|3740547\|26\|NZ_AP018255\|CRT	3740547-3740572	26	NZ_AP018255.1	10086194-10086219	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	6208214-6208239	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	6392696-6392721	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	10097243-10097268	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	2973132-2973157	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	4230681-4230706	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	5016322-5016347	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	6795392-6795417	2	0.923
NZ_AP018255_12	12.9\|3740637\|26\|NZ_AP018255\|CRT	3740637-3740662	26	NZ_AP018255.1	10086194-10086219	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	6208214-6208239	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	6392696-6392721	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	10097243-10097268	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	2973132-2973157	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	4230681-4230706	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	5016322-5016347	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	6795392-6795417	2	0.923
NZ_AP018255_12	12.11\|3740727\|26\|NZ_AP018255\|CRT	3740727-3740752	26	NZ_AP018255.1	10086194-10086219	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	6208214-6208239	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	6392696-6392721	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	10097243-10097268	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	2973132-2973157	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	4230681-4230706	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	5016322-5016347	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	6795392-6795417	2	0.923
NZ_AP018255_12	12.13\|3740817\|26\|NZ_AP018255\|CRT	3740817-3740842	26	NZ_AP018255.1	10086194-10086219	2	0.923
NZ_AP018255_29	29.1\|7229706\|44\|NZ_AP018255\|CRISPRCasFinder	7229706-7229749	44	NZ_AP018255.1	7283380-7283423	2	0.955

1. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to position: 3672800-3672830, mismatch: 0, identity: 1.0

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
ttgcaattaatcctggttgaagcgtaattat	Protospacer
*******************************

2. spacer 12.3|3740367|26|NZ_AP018255|CRT matches to position: 3740861-3740886, mismatch: 0, identity: 1.0

gtatctgttaacccgcccttacgagg	CRISPR spacer
gtatctgttaacccgcccttacgagg	Protospacer
**************************

3. spacer 12.5|3740457|26|NZ_AP018255|CRT matches to position: 5016321-5016346, mismatch: 2, identity: 0.923

gtatctgttaacccgcccttacgaga	CRISPR spacer
gtatttgttaacccgcccttacaaga	Protospacer
****.*****************.***

4. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 6208214-6208239, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

5. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 6392696-6392721, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

6. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 10097243-10097268, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

7. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 2973132-2973157, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

8. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 4230681-4230706, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

9. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 5016322-5016347, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccttacaagat	Protospacer
***.*****************.****

10. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 6795392-6795417, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccctacgagat	Protospacer
***.*************.********

11. spacer 12.7|3740547|26|NZ_AP018255|CRT matches to position: 10086194-10086219, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

12. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 6208214-6208239, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

13. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 6392696-6392721, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

14. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 10097243-10097268, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

15. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 2973132-2973157, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

16. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 4230681-4230706, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

17. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 5016322-5016347, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccttacaagat	Protospacer
***.*****************.****

18. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 6795392-6795417, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccctacgagat	Protospacer
***.*************.********

19. spacer 12.9|3740637|26|NZ_AP018255|CRT matches to position: 10086194-10086219, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

20. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 6208214-6208239, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

21. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 6392696-6392721, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

22. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 10097243-10097268, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

23. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 2973132-2973157, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

24. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 4230681-4230706, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

25. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 5016322-5016347, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccttacaagat	Protospacer
***.*****************.****

26. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 6795392-6795417, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccctacgagat	Protospacer
***.*************.********

27. spacer 12.11|3740727|26|NZ_AP018255|CRT matches to position: 10086194-10086219, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

28. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 6208214-6208239, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

29. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 6392696-6392721, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

30. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 10097243-10097268, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

31. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 2973132-2973157, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgttaacccgcccttacaggat	Protospacer
*********************..***

32. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 4230681-4230706, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

33. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 5016322-5016347, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccttacaagat	Protospacer
***.*****************.****

34. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 6795392-6795417, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatttgttaacccgcccctacgagat	Protospacer
***.*************.********

35. spacer 12.13|3740817|26|NZ_AP018255|CRT matches to position: 10086194-10086219, mismatch: 2, identity: 0.923

tatctgttaacccgcccttacgagat	CRISPR spacer
tatctgtaaacccgcccttacaagat	Protospacer
******* *************.****

36. spacer 29.1|7229706|44|NZ_AP018255|CRISPRCasFinder matches to position: 7283380-7283423, mismatch: 2, identity: 0.955

cggggcgggtttaccaaaatttccggttatttaccaggatatag	CRISPR spacer
cggggcgggtttaccaaaatttccggttgtttaccaggatgtag	Protospacer
****************************.***********.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019727	Calothrix sp. PCC 6303 plasmid pCAL6303.01, complete sequence	814-844	1	0.968
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019727	Calothrix sp. PCC 6303 plasmid pCAL6303.01, complete sequence	4495-4525	1	0.968
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP050184	Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence	154622-154648	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	1217-1243	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	335543-335569	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	61561-61587	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	10073-10099	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	276273-276299	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	8559-8585	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	66727-66753	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	HM144387	Bacillus phage W.Ph., complete genome	4653-4679	4	0.852
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP046625	Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence	37482-37508	4	0.852
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	76281-76311	4	0.871
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	112477-112507	4	0.871
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019774	Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence	80646-80676	4	0.871
NZ_AP018255_25	25.1\|6651298\|26\|NZ_AP018255\|CRISPRCasFinder	6651298-6651323	26	MH884513	Bacillus phage vB_BpsS-36, complete genome	39379-39404	4	0.846
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	144024-144050	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP004877	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence	154037-154063	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	117505-117531	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	112046-112072	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	102034-102060	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	378849-378875	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP007616	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence	214610-214636	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP007616	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence	204598-204624	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP004860	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence	163818-163844	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP004860	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence	173830-173856	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	26899-26925	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP010090	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence	129642-129668	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35220-35246	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35172-35198	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35178-35204	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35184-35210	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35190-35216	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35196-35222	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35202-35228	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35208-35234	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_015253	Brochothrix phage A9, complete genome	35214-35240	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60211-60237	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60217-60243	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60223-60249	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60229-60255	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60235-60261	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60241-60267	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60247-60273	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60253-60279	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60259-60285	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60265-60291	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60271-60297	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60277-60303	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60283-60309	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60289-60315	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60295-60321	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926057	Corynebacterium phage Kimchi1738, complete genome	60301-60327	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926056	Corynebacterium phage Cruella, complete genome	61303-61329	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926056	Corynebacterium phage Cruella, complete genome	61309-61335	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926056	Corynebacterium phage Cruella, complete genome	61315-61341	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926056	Corynebacterium phage Cruella, complete genome	61321-61347	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH926056	Corynebacterium phage Cruella, complete genome	61327-61353	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MG198776	Corynebacterium phage C3PO, complete genome	61203-61229	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MG198776	Corynebacterium phage C3PO, complete genome	61209-61235	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MG198776	Corynebacterium phage C3PO, complete genome	61215-61241	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MG198776	Corynebacterium phage C3PO, complete genome	61221-61247	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MG198776	Corynebacterium phage C3PO, complete genome	61227-61253	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_020292	Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence	84129-84155	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	505842-505868	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	505848-505874	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_KJ776578	Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence	12731-12757	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_KJ776581	Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence	12731-12757	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	17542-17568	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	16536-16562	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	674567-674593	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	441435-441461	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	441482-441508	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP022280	Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence	7934-7960	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP022280	Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence	7940-7966	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP022280	Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence	7946-7972	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP022280	Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence	7952-7978	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP046625	Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence	38767-38793	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	CP020756	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence	116176-116202	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	140237-140263	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	712898-712924	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	169691-169717	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	103020-103046	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	172459-172485	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	172465-172491	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP047086	Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence	164163-164189	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_011655	Bacillus cereus AH187 plasmid pAH187_270, complete sequence	262918-262944	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	389869-389895	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	825534-825560	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	277551-277577	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_010924	Bacillus cereus strain AH187 plasmid pCER270, complete sequence	49245-49271	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	CP045776	Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence	38560-38586	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_016792	Bacillus cereus NC7401 plasmid pNCcld, complete sequence	48114-48140	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MN552147	Leuconostoc phage P974, complete genome	19228-19254	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250021	Prevotella phage Lak-B2, complete genome	83472-83498	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	KX578044	Leuconostoc phage CHA, complete genome	19366-19392	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK408758	Campylobacter phage CP20, complete genome	55911-55937	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MN693784	Marine virus AFVG_250M892, complete genome	59332-59358	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MF001355	Proteus phage PM2, partial genome	149651-149677	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	KC013028	Leuconostoc phage phiLNTR2, complete genome	19228-19254	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250024	Prevotella phage Lak-B5, complete genome	77137-77163	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	KP890823	Proteus phage vB_PmiM_Pm5461, complete genome	205-231	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250028	Prevotella phage Lak-B9, complete genome	81263-81289	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	KX578043	Leuconostoc phage CHB, complete genome	19489-19515	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250023	Prevotella phage Lak-B4, complete genome	83371-83397	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250025	Prevotella phage Lak-B6, complete genome	80322-80348	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250022	Prevotella phage Lak-B3, complete genome	80337-80363	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250016	Prevotella phage Lak-A1, complete genome	366264-366290	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250027	Prevotella phage Lak-B8, complete genome	83504-83530	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	KC013027	Leuconostoc phage phiLN34, complete genome	19236-19262	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	FN667788	Campylobacter phage CP220, complete genome	56050-56076	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	FN667789	Campylobacter phage CPt10, complete genome	55744-55770	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MN693030	Marine virus AFVG_117M28, complete genome	321-347	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	KC013029	Leuconostoc phage phiLNTR3, complete genome	19228-19254	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250026	Prevotella phage Lak-B7, complete genome	83504-83530	5	0.815
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250020	Prevotella phage Lak-B1, complete genome	81243-81269	5	0.815
NZ_AP018255_7	7.1\|2521989\|26\|NZ_AP018255\|CRISPRCasFinder	2521989-2522014	26	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	332739-332764	5	0.808
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	72780-72810	5	0.839
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	108976-109006	5	0.839
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NZ_CP046708	Nostoc sp. ATCC 53789 plasmid pNsp_e, complete sequence	26464-26494	5	0.839
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019774	Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence	84147-84177	5	0.839
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_003273	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120delta, complete sequence	45261-45291	5	0.839
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	505854-505880	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP046625	Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence	37488-37514	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	89312-89338	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_AP019726	Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence	8687-8713	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP016739	Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence	20716-20742	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	116945-116971	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP029459	Clostridium novyi strain 150557 plasmid pCN1, complete sequence	46079-46105	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	AP014361	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C80, * SEQUENCING IN PROGRESS *	8778-8804	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_007021	Staphylococcus phage Twort, complete genome	115876-115902	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH884509	Bacillus phage vB_BboS-125, complete genome	9646-9672	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MH884509	Bacillus phage vB_BboS-125, complete genome	40226-40252	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT497107	Flavobacterium phage vB_Fsp_elemo3-9B, partial genome	54711-54737	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT497091	Flavobacterium phage vB_Fsp_elemo13-5B, partial genome	47291-47317	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250029	Prevotella phage Lak-C1, complete genome	331118-331144	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MK250019	Prevotella phage Lak-A2, complete genome	285424-285450	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT497098	Flavobacterium phage vB_Fsp_elemo15-9A, partial genome	12185-12211	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT497067	Flavobacterium phage vB_Fsp_elemo14-1A, partial genome	44515-44541	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT497066	Flavobacterium phage vB_Fsp_elemo13-1C, partial genome	43925-43951	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT497071	Flavobacterium phage vB_Fsp_elemo6-3D, partial genome	43313-43339	6	0.778
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	MT151386	Staphylococcus virus Twort, complete genome	27699-27725	6	0.778
NZ_AP018255_4	4.1\|1797117\|28\|NZ_AP018255\|CRISPRCasFinder	1797117-1797144	28	MG065692	UNVERIFIED: Campylobacter phage C13, complete genome	83068-83095	6	0.786
NZ_AP018255_4	4.1\|1797117\|28\|NZ_AP018255\|CRISPRCasFinder	1797117-1797144	28	MT446420	UNVERIFIED: Escherichia virus TH54, complete genome	47008-47035	6	0.786
NZ_AP018255_4	4.1\|1797117\|28\|NZ_AP018255\|CRISPRCasFinder	1797117-1797144	28	MH370375	Salmonella phage S124, complete genome	4214-4241	6	0.786
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	72880-72910	6	0.806
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019773	Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence	109076-109106	6	0.806
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	NC_019774	Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence	84047-84077	6	0.806
NZ_AP018255_11	11.2\|3676411\|31\|NZ_AP018255\|CRISPRCasFinder	3676411-3676441	31	AP018324	Nostoc sp. HK-01 plasmid plasmid6 DNA, complete genome	2483-2513	6	0.806
NZ_AP018255_15	15.24\|3762311\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762311-3762343	33	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	602-634	6	0.818
NZ_AP018255_37	37.1\|9705892\|29\|NZ_AP018255\|CRISPRCasFinder	9705892-9705920	29	NZ_CP044049	Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence	168347-168375	6	0.793
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP016317	Bacillus cereus strain M3 plasmid pBCM301, complete sequence	31644-31670	7	0.741
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP007677	Staphylococcus aureus strain HUV05 plasmid pHUV05-01, complete sequence	10148-10174	7	0.741
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP007678	Staphylococcus aureus strain HUV05 plasmid pHUV05-02, complete sequence	1685-1711	7	0.741
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NZ_CP034685	Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence	160422-160448	7	0.741
NZ_AP018255_1	1.1\|179458\|27\|NZ_AP018255\|CRISPRCasFinder	179458-179484	27	NC_018492	Bacillus cereus FRI-35 plasmid p01, complete sequence	6333-6359	7	0.741
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	MN434095	Klebsiella pneumoniae phage JIPh_Kp122, complete genome	141584-141618	7	0.8
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	KY000080	Klebsiella phage KPV15, complete genome	160899-160933	7	0.8
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	MG751100	Klebsiella phage KP1, complete genome	142824-142858	7	0.8
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	NC_028686	Klebsiella phage JD18, complete genome	141418-141452	7	0.8
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	MK421971	Klebsiella phage vB_KpnM_GF, partial genome	138628-138662	7	0.8
NZ_AP018255_14	14.22\|3748695\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748695-3748728	34	NC_013390	Staphylococcus epidermidis plasmid SAP108B, complete sequence	1550-1583	7	0.794
NZ_AP018255_15	15.24\|3762311\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762311-3762343	33	NZ_CP021029	Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence	603-635	7	0.788
NZ_AP018255_15	15.24\|3762311\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762311-3762343	33	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	602-634	7	0.788
NZ_AP018255_15	15.24\|3762311\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762311-3762343	33	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	611-643	7	0.788
NZ_AP018255_15	15.24\|3762311\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762311-3762343	33	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	605-637	7	0.788
NZ_AP018255_15	15.48\|3764027\|38\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3764027-3764064	38	NZ_CP022055	Staphylococcus saprophyticus strain FDAARGOS_336 plasmid unnamed1, complete sequence	2185-2222	7	0.816
NZ_AP018255_21	21.60\|5753552\|33\|NZ_AP018255\|CRISPRCasFinder,CRT,PILER-CR	5753552-5753584	33	JQ807233	Environmental Halophage eHP-12, partial genome	6939-6971	7	0.788
NZ_AP018255_28	28.1\|7117871\|28\|NZ_AP018255\|CRISPRCasFinder	7117871-7117898	28	NZ_CP019939	Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed2, complete sequence	15046-15073	7	0.75
NZ_AP018255_14	14.8\|3747688\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3747688-3747720	33	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	651432-651464	8	0.758
NZ_AP018255_14	14.17\|3748335\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748335-3748368	34	MN693794	Marine virus AFVG_250M688, complete genome	27634-27667	8	0.765
NZ_AP018255_14	14.22\|3748695\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748695-3748728	34	MH319721	Marine virus AG-345-D19 Ga0172267_102 genomic sequence	11449-11482	8	0.765
NZ_AP018255_14	14.22\|3748695\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748695-3748728	34	NZ_LR735422	Staphylococcus epidermidis strain none isolate Se_BPH0697 plasmid 2	61668-61701	8	0.765
NZ_AP018255_15	15.27\|3762525\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762525-3762558	34	NZ_CP029091	Pseudomonas aeruginosa strain AR441 plasmid unnamed1, complete sequence	125551-125584	8	0.765
NZ_AP018255_15	15.27\|3762525\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762525-3762558	34	MN583270	Pseudomonas aeruginosa strain NK546 plasmid pNK546b, complete sequence	83040-83073	8	0.765
NZ_AP018255_15	15.27\|3762525\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3762525-3762558	34	NZ_CP027167	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed3, complete sequence	154610-154643	8	0.765
NZ_AP018255_15	15.41\|3763525\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3763525-3763558	34	NZ_CP031103	Leclercia sp. W17 plasmid pW17-2, complete sequence	38898-38931	8	0.765
NZ_AP018255_18	18.11\|5424515\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5424515-5424549	35	NZ_CP022418	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence	36730-36764	8	0.771
NZ_AP018255_20	20.37\|5744591\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5744591-5744624	34	NZ_AP018048	Photobacterium damselae subsp. piscicida strain 91-197 plasmid p91-197-2	19749-19782	8	0.765
NZ_AP018255_21	21.1\|5749270\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5749270-5749303	34	MK613348	Roseobacter phage CRP-6, complete genome	41554-41587	8	0.765
NZ_AP018255_21	21.60\|5753552\|33\|NZ_AP018255\|CRISPRCasFinder,CRT,PILER-CR	5753552-5753584	33	JQ807237	Environmental Halophage eHP-16, partial genome	31967-31999	8	0.758
NZ_AP018255_37	37.1\|9705892\|29\|NZ_AP018255\|CRISPRCasFinder	9705892-9705920	29	MN855928	Bacteriophage sp. isolate 474, complete genome	4375-4403	8	0.724
NZ_AP018255_14	14.12\|3747977\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3747977-3748010	34	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	85438-85471	9	0.735
NZ_AP018255_14	14.12\|3747977\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3747977-3748010	34	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	66369-66402	9	0.735
NZ_AP018255_15	15.39\|3763383\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3763383-3763415	33	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	569702-569734	9	0.727
NZ_AP018255_20	20.38\|5744662\|32\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5744662-5744693	32	JQ067084	Pseudomonas phage PaMx25, complete genome	6959-6990	9	0.719
NZ_AP018255_20	20.38\|5744662\|32\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5744662-5744693	32	KX898399	Pseudomonas phage JG012, complete genome	5097-5128	9	0.719
NZ_AP018255_20	20.38\|5744662\|32\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5744662-5744693	32	NC_031058	Pseudomonas phage NP1, complete genome	6966-6997	9	0.719
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	KU686193	Synechococcus phage S-CAM1 isolate 0310NB17, complete genome	53011-53045	10	0.714
NZ_AP018255_15	15.5\|3760945\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3760945-3760978	34	NZ_CP025432	Paracoccus zhejiangensis strain J6 plasmid pPZ02, complete sequence	60227-60260	10	0.706
NZ_AP018255_21	21.39\|5752022\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5752022-5752054	33	MN966730	Vibrio phage Cilsick, complete genome	43902-43934	10	0.697
NZ_AP018255_21	21.39\|5752022\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5752022-5752054	33	MT460514	Vibrio phage AG74, complete genome	43035-43067	10	0.697
NZ_AP018255_21	21.39\|5752022\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5752022-5752054	33	MN966731	Vibrio phage Chazly21, complete genome	43517-43549	10	0.697
NZ_AP018255_21	21.39\|5752022\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5752022-5752054	33	MK907780	Vibrio phage Pontus, complete genome	44389-44421	10	0.697
NZ_AP018255_21	21.39\|5752022\|33\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5752022-5752054	33	MN966732	Vibrio phage Chester, complete genome	43908-43940	10	0.697
NZ_AP018255_14	14.13\|3748048\|35\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748048-3748082	35	MN693325	Marine virus AFVG_25M39, complete genome	10202-10236	11	0.686
NZ_AP018255_14	14.18\|3748406\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748406-3748439	34	KX229736	Campylobacter phage PC5, complete genome	21982-22015	11	0.676
NZ_AP018255_19	19.1\|5554340\|36\|NZ_AP018255\|CRISPRCasFinder	5554340-5554375	36	MT446420	UNVERIFIED: Escherichia virus TH54, complete genome	103610-103645	11	0.694
NZ_AP018255_19	19.1\|5554340\|36\|NZ_AP018255\|CRISPRCasFinder	5554340-5554375	36	MT446422	UNVERIFIED: Escherichia virus TH57, complete genome	104669-104704	11	0.694
NZ_AP018255_20	20.12\|5742779\|37\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	5742779-5742815	37	NC_023594	Shewanella phage Spp001, complete genome	36426-36462	11	0.703
NZ_AP018255_36	36.2\|9213198\|36\|NZ_AP018255\|CRT,PILER-CR,CRISPRCasFinder	9213198-9213233	36	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	16463-16498	11	0.694
NZ_AP018255_14	14.18\|3748406\|34\|NZ_AP018255\|PILER-CR,CRISPRCasFinder,CRT	3748406-3748439	34	MH107028	Campylobacter phage CP39, partial genome	15429-15462	12	0.647
NZ_AP018255_19	19.1\|5554340\|36\|NZ_AP018255\|CRISPRCasFinder	5554340-5554375	36	NC_028957	Enterobacteria phage vB_EcoM_VR26, complete genome	42668-42703	12	0.667
NZ_AP018255_19	19.1\|5554340\|36\|NZ_AP018255\|CRISPRCasFinder	5554340-5554375	36	MT533174	Escherichia phage CJ20, complete genome	153778-153813	12	0.667

1. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019727 (Calothrix sp. PCC 6303 plasmid pCAL6303.01, complete sequence) position: , mismatch: 1, identity: 0.968

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
ttgcaattaatcctggttgaagcgcaattat	Protospacer
************************.******

2. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019727 (Calothrix sp. PCC 6303 plasmid pCAL6303.01, complete sequence) position: , mismatch: 1, identity: 0.968

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
ttgcaattaatcctggttgaagcgcaattat	Protospacer
************************.******

3. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP050184 (Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
attttacaaatataaatacaaatatag	Protospacer
.  ***.********************

4. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatgctaatatag	Protospacer
 .***************.* *******

5. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
gtgggataaatataaatacaaatacag	Protospacer
* *  *******************.**

6. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatgctaatatag	Protospacer
 .***************.* *******

7. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatgctaatatag	Protospacer
 .***************.* *******

8. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
gaatcataaatataaatacaaatatta	Protospacer
**.*.******************** .

9. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatgctaatatag	Protospacer
 .***************.* *******

10. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatgctaatatag	Protospacer
 .***************.* *******

11. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to HM144387 (Bacillus phage W.Ph., complete genome) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
catttctaaatataaatacaaatataa	Protospacer
 * ** ********************.

12. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP046625 (Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence) position: , mismatch: 4, identity: 0.852

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaatacaaatataaatatag	Protospacer
 *.*********.*****.********

13. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 4, identity: 0.871

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaattaatcctggttgaaacggatgatt--	Protospacer
*********************.**  *.***

14. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 4, identity: 0.871

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaattaatcctggttgaaacggatgatt--	Protospacer
*********************.**  *.***

15. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019774 (Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence) position: , mismatch: 4, identity: 0.871

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaattaatcctggttgaaacggatgatt--	Protospacer
*********************.**  *.***

16. spacer 25.1|6651298|26|NZ_AP018255|CRISPRCasFinder matches to MH884513 (Bacillus phage vB_BpsS-36, complete genome) position: , mismatch: 4, identity: 0.846

tcaacactcatcactcaccactctcc	CRISPR spacer
cccatactcattactcaccactctcc	Protospacer
.* *.******.**************

17. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attgtacaaatataaatacaaatatag	Protospacer
.   **.********************

18. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP004877 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB431, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aagttataaatataaatagtaataaaa	Protospacer
.*****************  **** *.

19. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
actgtataaatataaatacaaatgtag	Protospacer
.   *******************.***

20. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attgtacaaatataaatacaaatatag	Protospacer
.   **.********************

21. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aagttataaatataaatagtaataaaa	Protospacer
.*****************  **** *.

22. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
actgtataaatataaatacaaatgtag	Protospacer
.   *******************.***

23. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attgtacaaatataaatacaaatatag	Protospacer
.   **.********************

24. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP007616 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB400, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aagttataaatataaatagtaataaaa	Protospacer
.*****************  **** *.

25. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attgtacaaatataaatacaaatatag	Protospacer
.   **.********************

26. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP004860 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB422, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aagttataaatataaatagtaataaaa	Protospacer
.*****************  **** *.

27. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
actgtataaatataaatacaaatgtag	Protospacer
.   *******************.***

28. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP010090 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB426, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attgtacaaatataaatacaaatatag	Protospacer
.   **.********************

29. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
agattataaatataaatataaatataa	Protospacer
...***************.*******.

30. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

31. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

32. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

33. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

34. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

35. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

36. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

37. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

38. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attttataaatataaatataaatataa	Protospacer
.  ***************.*******.

39. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

40. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

41. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

42. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

43. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

44. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

45. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

46. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

47. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

48. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

49. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

50. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

51. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

52. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

53. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926057 (Corynebacterium phage Kimchi1738, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

54. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926056 (Corynebacterium phage Cruella, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attttataaatataaatataaatataa	Protospacer
.  ***************.*******.

55. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926056 (Corynebacterium phage Cruella, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

56. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926056 (Corynebacterium phage Cruella, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

57. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926056 (Corynebacterium phage Cruella, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

58. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH926056 (Corynebacterium phage Cruella, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

59. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MG198776 (Corynebacterium phage C3PO, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
attttataaatataaatataaatataa	Protospacer
.  ***************.*******.

60. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MG198776 (Corynebacterium phage C3PO, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

61. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MG198776 (Corynebacterium phage C3PO, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

62. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MG198776 (Corynebacterium phage C3PO, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

63. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MG198776 (Corynebacterium phage C3PO, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

64. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_020292 (Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aagttataaatataaatacaacaacaa	Protospacer
.********************  *.*.

65. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

66. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaaatataaatataaatataaatataa	Protospacer
.*. **************.*******.

67. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_KJ776578 (Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttgttataaatgaaaatacaaatatac	Protospacer
  *********. *************

68. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_KJ776581 (Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttgttataaatgaaaatacaaatatac	Protospacer
  *********. *************

69. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttgttataaatgaaaatacaaatatac	Protospacer
  *********. *************

70. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttataaatatatatagaaatatag	Protospacer
   *********** *** ********

71. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttataaatatatatagaaatatag	Protospacer
   *********** *** ********

72. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttataaatatatatagaaatatag	Protospacer
   *********** *** ********

73. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttataaatatatatagaaatatag	Protospacer
   *********** *** ********

74. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP022280 (Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

75. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP022280 (Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

76. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP022280 (Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taaatataaatataaatataaatataa	Protospacer
 *. **************.*******.

77. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP022280 (Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
gtttcataaatataaatataaatataa	Protospacer
*  *.*************.*******.

78. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP046625 (Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaataccaatacaaatatat	Protospacer
 *.*********. ************

79. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ctctaataaataaaaatacaaatatag	Protospacer
   * ******* **************

80. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttataaatatatatagaaatatag	Protospacer
   *********** *** ********

81. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttataaatatatatagaaatatag	Protospacer
   *********** *** ********

82. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaatataaatataaatagat	Protospacer
 *.***************.***** *

83. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aatttataaatttaaatataaatatac	Protospacer
.* ******** ******.*******

84. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaatataaatataaatttat	Protospacer
 *.***************.**** **

85. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataattataaatataaatataa	Protospacer
 *.****** ********.*******.

86. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP047086 (Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aatttataaatataaataaaactataa	Protospacer
.* *************** ** ****.

87. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aatttataaatataaataaaactataa	Protospacer
.* *************** ** ****.

88. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaattataaatataaatacaataatat	Protospacer
.*.******************  ***

89. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
caaatgtagatataaatacaaatatag	Protospacer
 *. *.**.******************

90. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
tatttataaatataaaaataaatatat	Protospacer
 * ************* *.*******

91. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aatttataaatataaataaaactataa	Protospacer
.* *************** ** ****.

92. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aatttataaatataaataaaactataa	Protospacer
.* *************** ** ****.

93. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aatttataaatataaataaaactataa	Protospacer
.* *************** ** ****.

94. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MN552147 (Leuconostoc phage P974, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
cacttataaatataattacaaatacgg	Protospacer
 * ************ ********..*

95. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

96. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to KX578044 (Leuconostoc phage CHA, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
cacttataaatataattacaaatacgg	Protospacer
 * ************ ********..*

97. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK408758 (Campylobacter phage CP20, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaatataaataaaaataaat	Protospacer
 *.*************** ***** *

98. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MN693784 (Marine virus AFVG_250M892, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattatatatataaatataaatatat	Protospacer
 *.***** *********.*******

99. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MF001355 (Proteus phage PM2, partial genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattctaaatataaatacaaatctat	Protospacer
 *.** ***************** **

100. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to KC013028 (Leuconostoc phage phiLNTR2, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
cacttataaatataattacaaatacgg	Protospacer
 * ************ ********..*

101. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

102. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to KP890823 (Proteus phage vB_PmiM_Pm5461, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattctaaatataaatacaaatctat	Protospacer
 *.** ***************** **

103. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

104. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to KX578043 (Leuconostoc phage CHB, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
cacttataaatataattacaaatacgg	Protospacer
 * ************ ********..*

105. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

106. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

107. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

108. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatacacatggag	Protospacer
 .****************** **. **

109. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

110. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to KC013027 (Leuconostoc phage phiLN34, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
cacttataaatataattacaaatacgg	Protospacer
 * ************ ********..*

111. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaatataaataaaaataaaa	Protospacer
 *.*************** ***** *.

112. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to FN667789 (Campylobacter phage CPt10, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattataaatataaataaaaataaat	Protospacer
 *.*************** ***** *

113. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MN693030 (Marine virus AFVG_117M28, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
taattatatatataaatataaatatat	Protospacer
 *.***** *********.*******

114. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to KC013029 (Leuconostoc phage phiLNTR3, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
cacttataaatataattacaaatacgg	Protospacer
 * ************ ********..*

115. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

116. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 5, identity: 0.815

gagttataaatataaatacaaatatag	CRISPR spacer
aaactatatatataaatgcaaatatag	Protospacer
.*..**** ********.*********

117. spacer 7.1|2521989|26|NZ_AP018255|CRISPRCasFinder matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

cggacatgaatggattttagattttg	CRISPR spacer
attacatgaatggattttaaatttta	Protospacer
   ****************.*****.

118. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 5, identity: 0.839

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaaataatcctggttgaaacggatgatt--	Protospacer
****** **************.**  *.***

119. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 5, identity: 0.839

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaaataatcctggttgaaacggatgatt--	Protospacer
****** **************.**  *.***

120. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NZ_CP046708 (Nostoc sp. ATCC 53789 plasmid pNsp_e, complete sequence) position: , mismatch: 5, identity: 0.839

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaattaatcctggtcgaaacggatgatt--	Protospacer
*****************.***.**  *.***

121. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019774 (Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence) position: , mismatch: 5, identity: 0.839

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaaataatcctggttgaaacggatgatt--	Protospacer
****** **************.**  *.***

122. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_003273 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120delta, complete sequence) position: , mismatch: 5, identity: 0.839

ttgcaattaatcctggttgaagcg--taattat	CRISPR spacer
ttgcaattaatcctggtcgaaacggatgatt--	Protospacer
*****************.***.**  *.***

123. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
tcattaaaaatataaatataaatataa	Protospacer
  .*** ***********.*******.

124. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP046625 (Streptococcus sp. CNU G3 plasmid p1_CUN_G3, complete sequence) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
taaccataattataaatacaaatataa	Protospacer
 *...**** ****************.

125. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
ttcttatgaatataaatactaatatac	Protospacer
   ****.*********** ******

126. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_AP019726 (Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
catatataaatataaatataaatatgt	Protospacer
 *  **************.******.

127. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP016739 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3C, complete sequence) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
atattatagatataaatataaatatat	Protospacer
. .*****.*********.*******

128. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
atattataaatattaatacatatatat	Protospacer
. .********** ****** *****

129. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP029459 (Clostridium novyi strain 150557 plasmid pCN1, complete sequence) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
ttattataaatataaatatatatataa	Protospacer
  .***************.* *****.

130. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to AP014361 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C80, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aataaataaatataaatataaatatat	Protospacer
.*   *************.*******

131. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_007021 (Staphylococcus phage Twort, complete genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aaagaataactataaatacaaatataa	Protospacer
.*.  **** ****************.

132. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH884509 (Bacillus phage vB_BboS-125, complete genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
tatatataaatataaatataaatatta	Protospacer
 *  **************.****** .

133. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MH884509 (Bacillus phage vB_BboS-125, complete genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
tatatataaatataaatataaatatta	Protospacer
 *  **************.****** .

134. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT497107 (Flavobacterium phage vB_Fsp_elemo3-9B, partial genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aacgtataaatctaaatacaaatatta	Protospacer
.*  ******* ************* .

135. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT497091 (Flavobacterium phage vB_Fsp_elemo13-5B, partial genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aacgtataaatctaaatacaaatatta	Protospacer
.*  ******* ************* .

136. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatacacatggaa	Protospacer
 .****************** **. *.

137. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
tggttataaatataaatacacatggaa	Protospacer
 .****************** **. *.

138. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT497098 (Flavobacterium phage vB_Fsp_elemo15-9A, partial genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aacgtataaatctaaatacaaatatta	Protospacer
.*  ******* ************* .

139. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT497067 (Flavobacterium phage vB_Fsp_elemo14-1A, partial genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aacgtataaatctaaatacaaatatta	Protospacer
.*  ******* ************* .

140. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT497066 (Flavobacterium phage vB_Fsp_elemo13-1C, partial genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aacgtataaatctaaatacaaatatta	Protospacer
.*  ******* ************* .

141. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT497071 (Flavobacterium phage vB_Fsp_elemo6-3D, partial genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aacgtataaatctaaatacaaatatta	Protospacer
.*  ******* ************* .

142. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to MT151386 (Staphylococcus virus Twort, complete genome) position: , mismatch: 6, identity: 0.778

gagttataaatataaatacaaatatag	CRISPR spacer
aaagaataactataaatacaaatataa	Protospacer
.*.  **** ****************.

143. spacer 4.1|1797117|28|NZ_AP018255|CRISPRCasFinder matches to MG065692 (UNVERIFIED: Campylobacter phage C13, complete genome) position: , mismatch: 6, identity: 0.786

agttagttctgctacaggtgtttctgaa	CRISPR spacer
tgctggttctgctacaggtgtatctggt	Protospacer
 *.*.**************** ****.

144. spacer 4.1|1797117|28|NZ_AP018255|CRISPRCasFinder matches to MT446420 (UNVERIFIED: Escherichia virus TH54, complete genome) position: , mismatch: 6, identity: 0.786

agttagttctgctacaggtgtttctgaa	CRISPR spacer
aggtaattctgctacaggtgtttgatac	Protospacer
** **.*****************   *

145. spacer 4.1|1797117|28|NZ_AP018255|CRISPRCasFinder matches to MH370375 (Salmonella phage S124, complete genome) position: , mismatch: 6, identity: 0.786

agttagttctgctacaggtgtttctgaa	CRISPR spacer
tgctggttctgctacaggtgtatctggt	Protospacer
 *.*.**************** ****.

146. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 6, identity: 0.806

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
ttgcaattaatcctggctgaagttcaaatac	Protospacer
****************.*****. .** **.

147. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019773 (Anabaena cylindrica PCC 7122 plasmid pANACY.03, complete sequence) position: , mismatch: 6, identity: 0.806

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
ttgcaattaatcctggctgaagttcaaatac	Protospacer
****************.*****. .** **.

148. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to NC_019774 (Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence) position: , mismatch: 6, identity: 0.806

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
ttgcaattaatcctggctgaagttcaaatac	Protospacer
****************.*****. .** **.

149. spacer 11.2|3676411|31|NZ_AP018255|CRISPRCasFinder matches to AP018324 (Nostoc sp. HK-01 plasmid plasmid6 DNA, complete genome) position: , mismatch: 6, identity: 0.806

ttgcaattaatcctggttgaagcgtaattat	CRISPR spacer
agacccttaatcctggctgaagcgtaattat	Protospacer
  .*  **********.**************

150. spacer 15.24|3762311|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 6, identity: 0.818

--cgacttgataaaattgatagaatagaaaatcga	CRISPR spacer
atcggc--gataaaattgattgaatagagaatcgc	Protospacer
  **.*  ************ *******.*****

151. spacer 37.1|9705892|29|NZ_AP018255|CRISPRCasFinder matches to NZ_CP044049 (Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

caagaaacagtgctgagttgaaagtgctg	CRISPR spacer
cgaaaaacattgctgagttgaaagtggga	Protospacer
*.*.***** ****************  .

152. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 7, identity: 0.741

gagttataaatataaatacaaatatag	CRISPR spacer
tgtacataaatataaatagaaatataa	Protospacer
 .  .************* *******.

153. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP007677 (Staphylococcus aureus strain HUV05 plasmid pHUV05-01, complete sequence) position: , mismatch: 7, identity: 0.741

gagttataaatataaatacaaatatag	CRISPR spacer
atattctaaatataaatacaaataata	Protospacer
. .** ******************  .

154. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP007678 (Staphylococcus aureus strain HUV05 plasmid pHUV05-02, complete sequence) position: , mismatch: 7, identity: 0.741

gagttataaatataaatacaaatatag	CRISPR spacer
atattctaaatataaatacaaataata	Protospacer
. .** ******************  .

155. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 7, identity: 0.741

gagttataaatataaatacaaatatag	CRISPR spacer
tgtacataaatataaataaaaatataa	Protospacer
 .  .************* *******.

156. spacer 1.1|179458|27|NZ_AP018255|CRISPRCasFinder matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 7, identity: 0.741

gagttataaatataaatacaaatatag	CRISPR spacer
tgtacataaatataaatagaaatataa	Protospacer
 .  .************* *******.

157. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN434095 (Klebsiella pneumoniae phage JIPh_Kp122, complete genome) position: , mismatch: 7, identity: 0.8

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
tccgtaaaatgactcaattaatatacgtccttttg	Protospacer
*..  * ******** ************.******

158. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to KY000080 (Klebsiella phage KPV15, complete genome) position: , mismatch: 7, identity: 0.8

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
tccgtaaaatgactcaattaatatacgtccttttg	Protospacer
*..  * ******** ************.******

159. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MG751100 (Klebsiella phage KP1, complete genome) position: , mismatch: 7, identity: 0.8

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
tccgtaaaatgactcaattaatatacgtccttttg	Protospacer
*..  * ******** ************.******

160. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NC_028686 (Klebsiella phage JD18, complete genome) position: , mismatch: 7, identity: 0.8

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
tccgtaaaatgactcaattaatatacgtccttttg	Protospacer
*..  * ******** ************.******

161. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MK421971 (Klebsiella phage vB_KpnM_GF, partial genome) position: , mismatch: 7, identity: 0.8

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
tccgtaaaatgactcaattaatatacgtccttttg	Protospacer
*..  * ******** ************.******

162. spacer 14.22|3748695|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NC_013390 (Staphylococcus epidermidis plasmid SAP108B, complete sequence) position: , mismatch: 7, identity: 0.794

gtgcc-tttgtaattatcttatctggttgattttt	CRISPR spacer
-tgctatattcaattatattatcttgttgattttt	Protospacer
 ***. * * .****** ****** **********

163. spacer 15.24|3762311|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 7, identity: 0.788

--cgacttgataaaattgatagaatagaaaatcga	CRISPR spacer
atcggc--gataaaattgattgaatagagaatggc	Protospacer
  **.*  ************ *******.*** *

164. spacer 15.24|3762311|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 7, identity: 0.788

--cgacttgataaaattgatagaatagaaaatcga	CRISPR spacer
atcggc--gataaaattgattgaatagagaatggt	Protospacer
  **.*  ************ *******.*** *

165. spacer 15.24|3762311|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 7, identity: 0.788

--cgacttgataaaattgatagaatagaaaatcga	CRISPR spacer
atcggc--gataaaattgattgaatagagaatggc	Protospacer
  **.*  ************ *******.*** *

166. spacer 15.24|3762311|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 7, identity: 0.788

--cgacttgataaaattgatagaatagaaaatcga	CRISPR spacer
atcggc--gataaaattgattgaatagagaatggc	Protospacer
  **.*  ************ *******.*** *

167. spacer 15.48|3764027|38|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022055 (Staphylococcus saprophyticus strain FDAARGOS_336 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.816

ctagctactattggagtagcaagtattaataatgataa	CRISPR spacer
cttgcggataatggagtagcaattattaataatgatac	Protospacer
** ** . ** *********** **************

168. spacer 21.60|5753552|33|NZ_AP018255|CRISPRCasFinder,CRT,PILER-CR matches to JQ807233 (Environmental Halophage eHP-12, partial genome) position: , mismatch: 7, identity: 0.788

ttaatttcactcaacttagtacagtcgctagtt	CRISPR spacer
tcaatgtcactcaacttaggacagtcattacat	Protospacer
*.*** ************* ******..**  *

169. spacer 28.1|7117871|28|NZ_AP018255|CRISPRCasFinder matches to NZ_CP019939 (Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.75

gacttatcctcgcttgaattacgcgcct	CRISPR spacer
cccttatcctcgctggaaatacgcgatg	Protospacer
  ************ *** ****** .

170. spacer 14.8|3747688|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 8, identity: 0.758

caaaatc---tttgcagctacttcgtttttaagtct	CRISPR spacer
---actctgatttgcagctacttcttctttaagttg	Protospacer
   * **   ************** *.*******.

171. spacer 14.17|3748335|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN693794 (Marine virus AFVG_250M688, complete genome) position: , mismatch: 8, identity: 0.765

ttctaaatgctactgcaatggcaaaagcttgtga	CRISPR spacer
ttacaaatgctactgcaaaggcaaatgcgtctat	Protospacer
** .************** ****** ** * *.

172. spacer 14.22|3748695|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MH319721 (Marine virus AG-345-D19 Ga0172267_102 genomic sequence) position: , mismatch: 8, identity: 0.765

gtgcctttgtaattatcttatctggttgattttt	CRISPR spacer
gattatctataattatcttatcaggttgactttt	Protospacer
*  . *.*.************* ******.****

173. spacer 14.22|3748695|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR735422 (Staphylococcus epidermidis strain none isolate Se_BPH0697 plasmid 2) position: , mismatch: 8, identity: 0.765

gtgcc-tttgtaattatcttatctggttgattttt	CRISPR spacer
-tactatattcaattatattatcttgttgattttt	Protospacer
 *.*. * * .****** ****** **********

174. spacer 15.27|3762525|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029091 (Pseudomonas aeruginosa strain AR441 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

gagcatcactgaaaacatcaacgagattaaaaaa	CRISPR spacer
gatctgcactgaaaacatcaatgagatgaagacg	Protospacer
** *  ***************.***** **.* .

175. spacer 15.27|3762525|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN583270 (Pseudomonas aeruginosa strain NK546 plasmid pNK546b, complete sequence) position: , mismatch: 8, identity: 0.765

gagcatcactgaaaacatcaacgagattaaaaaa	CRISPR spacer
gatctgcactgaaaacatcaatgagatgaagacg	Protospacer
** *  ***************.***** **.* .

176. spacer 15.27|3762525|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027167 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

gagcatcactgaaaacatcaacgagattaaaaaa	CRISPR spacer
gatctgcactgaaaacatcaatgagatgaagacg	Protospacer
** *  ***************.***** **.* .

177. spacer 15.41|3763525|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031103 (Leclercia sp. W17 plasmid pW17-2, complete sequence) position: , mismatch: 8, identity: 0.765

ccaggttacaagaaatcaaaaagttatcaaatta	CRISPR spacer
caaaattggaaaaaatcaaaaagtcatcaaattt	Protospacer
* *..**. **.************.********

178. spacer 18.11|5424515|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022418 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence) position: , mismatch: 8, identity: 0.771

atacaaagcccgattaaccactattatcatcgtgg	CRISPR spacer
ctgtcgatcgcgattaaccactattaccatcgtgg	Protospacer
 *.. .* * ****************.********

179. spacer 20.37|5744591|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018048 (Photobacterium damselae subsp. piscicida strain 91-197 plasmid p91-197-2) position: , mismatch: 8, identity: 0.765

cgaccgtaaatagtgctaattgtgtgcaatccat	CRISPR spacer
ctgcatccaacagtggtaattgtgtgcaatccat	Protospacer
* .*  . **.**** ******************

180. spacer 21.1|5749270|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MK613348 (Roseobacter phage CRP-6, complete genome) position: , mismatch: 8, identity: 0.765

ataatagtcgggtaaagtgcgaaaatcgtcatca	CRISPR spacer
ttcactgtcgggtaaagagcgaagatcgtcagct	Protospacer
 * *. *********** *****.******* *

181. spacer 21.60|5753552|33|NZ_AP018255|CRISPRCasFinder,CRT,PILER-CR matches to JQ807237 (Environmental Halophage eHP-16, partial genome) position: , mismatch: 8, identity: 0.758

ttaatttcactcaacttagtacagtcgctagtt	CRISPR spacer
tcaatgtcactcaacttaggacagtcattgcat	Protospacer
*.*** ************* ******..*.  *

182. spacer 37.1|9705892|29|NZ_AP018255|CRISPRCasFinder matches to MN855928 (Bacteriophage sp. isolate 474, complete genome) position: , mismatch: 8, identity: 0.724

caagaaacagtgctgagttgaaagtgctg	CRISPR spacer
acccgaacagtgctgagtggaaaatgcta	Protospacer
    .************* ****.****.

183. spacer 14.12|3747977|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 9, identity: 0.735

aattcctaagtttaattcaatatcacag--caatag	CRISPR spacer
gattcctgagtttaattgaatatcaagattcatt--	Protospacer
.******.********* ******* ..  ** *

184. spacer 14.12|3747977|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 9, identity: 0.735

aattcctaagtttaattcaatatcacag--caatag	CRISPR spacer
gattcctgagtttaattgaatatcaagattcatt--	Protospacer
.******.********* ******* ..  ** *

185. spacer 15.39|3763383|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 9, identity: 0.727

ttttgagcgcattgtttctattgctcaggaata	CRISPR spacer
gcttcaacgcattgtttctattgctcgcaacaa	Protospacer
 .** *.*******************. .*  *

186. spacer 20.38|5744662|32|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to JQ067084 (Pseudomonas phage PaMx25, complete genome) position: , mismatch: 9, identity: 0.719

aattcgccttctcgaagtcaatgaagactgct	CRISPR spacer
cgagcgcatgctcgaagtcaatgaagaaggca	Protospacer
 .  *** * *****************  **

187. spacer 20.38|5744662|32|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to KX898399 (Pseudomonas phage JG012, complete genome) position: , mismatch: 9, identity: 0.719

aattcgccttctcgaagtcaatgaagactgct	CRISPR spacer
cgagcgcatgctcgaagtcaatgaagaaggca	Protospacer
 .  *** * *****************  **

188. spacer 20.38|5744662|32|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NC_031058 (Pseudomonas phage NP1, complete genome) position: , mismatch: 9, identity: 0.719

aattcgccttctcgaagtcaatgaagactgct	CRISPR spacer
cgagcgcatgctcgaagtcaatgaagaaggca	Protospacer
 .  *** * *****************  **

189. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to KU686193 (Synechococcus phage S-CAM1 isolate 0310NB17, complete genome) position: , mismatch: 10, identity: 0.714

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
gccttgctttgactctcttaatatacgtgcttttg	Protospacer
 ..* ..  ******* *********** ******

190. spacer 15.5|3760945|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025432 (Paracoccus zhejiangensis strain J6 plasmid pPZ02, complete sequence) position: , mismatch: 10, identity: 0.706

ttacatcaacaacgccaggaacaacgccaggaac	CRISPR spacer
cgccagtcccaacgccagcaacaccgccaggaaa	Protospacer
.  ** .  ********* **** *********

191. spacer 21.39|5752022|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN966730 (Vibrio phage Cilsick, complete genome) position: , mismatch: 10, identity: 0.697

gtactactgcattcactttgatagcccaatagg	CRISPR spacer
ccataacagcattcactttgttagcccaaggaa	Protospacer
 .*. ** ************ ******** ...

192. spacer 21.39|5752022|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MT460514 (Vibrio phage AG74, complete genome) position: , mismatch: 10, identity: 0.697

gtactactgcattcactttgatagcccaatagg	CRISPR spacer
ccataacagcattcactttgttagcccaaggaa	Protospacer
 .*. ** ************ ******** ...

193. spacer 21.39|5752022|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN966731 (Vibrio phage Chazly21, complete genome) position: , mismatch: 10, identity: 0.697

gtactactgcattcactttgatagcccaatagg	CRISPR spacer
ccataacagcattcactttgttagcccaaggaa	Protospacer
 .*. ** ************ ******** ...

194. spacer 21.39|5752022|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MK907780 (Vibrio phage Pontus, complete genome) position: , mismatch: 10, identity: 0.697

gtactactgcattcactttgatagcccaatagg	CRISPR spacer
ccataacagcattcactttgttagcccaaggaa	Protospacer
 .*. ** ************ ******** ...

195. spacer 21.39|5752022|33|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN966732 (Vibrio phage Chester, complete genome) position: , mismatch: 10, identity: 0.697

gtactactgcattcactttgatagcccaatagg	CRISPR spacer
ccataacagcattcactttgttagcccaaggaa	Protospacer
 .*. ** ************ ******** ...

196. spacer 14.13|3748048|35|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MN693325 (Marine virus AFVG_25M39, complete genome) position: , mismatch: 11, identity: 0.686

ttttgataatgactctattaatatacgttcttttg	CRISPR spacer
aagtgataatgactctattgatattcgtgcggcaa	Protospacer
   ****************.**** *** *  . .

197. spacer 14.18|3748406|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 11, identity: 0.676

tatgctattaaccatgagaatggtggagtactgg	CRISPR spacer
agatttattaatcatgagaatgttggagtatatt	Protospacer
 .  .******.********** *******.

198. spacer 19.1|5554340|36|NZ_AP018255|CRISPRCasFinder matches to MT446420 (UNVERIFIED: Escherichia virus TH54, complete genome) position: , mismatch: 11, identity: 0.694

aaagtaaagttttcataatatcatcattaccattta	CRISPR spacer
ctttaaaagttttcttgatatcatcattaccagcac	Protospacer
     ********* *.*************** .

199. spacer 19.1|5554340|36|NZ_AP018255|CRISPRCasFinder matches to MT446422 (UNVERIFIED: Escherichia virus TH57, complete genome) position: , mismatch: 11, identity: 0.694

aaagtaaagttttcataatatcatcattaccattta	CRISPR spacer
ctttaaaagttttcttgatatcatcattaccagcac	Protospacer
     ********* *.*************** .

200. spacer 20.12|5742779|37|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to NC_023594 (Shewanella phage Spp001, complete genome) position: , mismatch: 11, identity: 0.703

tcttcacagtaaaaaaatccactcctgttacagagtg	CRISPR spacer
cagttaggtcgaaaaatgccactcctgttacagagtg	Protospacer
.  *.* . ..*****  *******************

201. spacer 36.2|9213198|36|NZ_AP018255|CRT,PILER-CR,CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.694

attaaacattcaaacactcaatttaataatgattta	CRISPR spacer
tcatatcatacaaacacccaatttaataatgacgct	Protospacer
 .  * *** *******.**************. .

202. spacer 14.18|3748406|34|NZ_AP018255|PILER-CR,CRISPRCasFinder,CRT matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 12, identity: 0.647

tatgctattaaccatgagaatggtggagtactgg	CRISPR spacer
agatttattaatcatgagaatgttggagtgtatt	Protospacer
 .  .******.********** ******..

203. spacer 19.1|5554340|36|NZ_AP018255|CRISPRCasFinder matches to NC_028957 (Enterobacteria phage vB_EcoM_VR26, complete genome) position: , mismatch: 12, identity: 0.667

aaagtaaagttttcataatatcatcattaccattta	CRISPR spacer
ctttaaaagttttcttgatatcatcattacctgcgc	Protospacer
     ********* *.**************  .

204. spacer 19.1|5554340|36|NZ_AP018255|CRISPRCasFinder matches to MT533174 (Escherichia phage CJ20, complete genome) position: , mismatch: 12, identity: 0.667

aaagtaaagttttcataatatcatcattaccattta	CRISPR spacer
ctttaaaagttttcttgatatcatcattaccggcgc	Protospacer
     ********* *.**************. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

694767 : 713222

uncultured_marine_virus(25.0%)

plate,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096684191.1\|694767_696834_-\|tail	tail fiber domain-containing protein	A0A0F7L3R5	uncultured_marine_virus	2.9e-12	28.8
WP_096684192.1\|696907_698401_-	hypothetical protein	NA	NA	NA	NA
WP_096684193.1\|698425_699139_-	hypothetical protein	NA	NA	NA	NA
WP_096684194.1\|699191_700214_-	hypothetical protein	NA	NA	NA	NA
WP_096684195.1\|700318_704170_-\|plate	putative baseplate assembly protein	A0A1J0GW37	Streptomyces_phage	6.7e-18	26.6
WP_096684196.1\|704169_704568_-	GPW/gp25 family protein	A0A2K9VKZ9	Shigella_phage	1.4e-08	36.6
WP_096684197.1\|704583_704982_-	hypothetical protein	NA	NA	NA	NA
WP_096693808.1\|705141_705789_-\|tail	phage tail protein	NA	NA	NA	NA
WP_096684198.1\|705897_707001_-	phage late control D family protein	NA	NA	NA	NA
WP_096684199.1\|707006_707717_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_096684200.1\|707707_710185_-	hypothetical protein	NA	NA	NA	NA
WP_096684201.1\|710323_710806_-\|tail	phage tail protein	NA	NA	NA	NA
WP_096684202.1\|711143_711506_-	hypothetical protein	NA	NA	NA	NA
WP_096684203.1\|711638_712067_-\|tail	phage tail protein	NA	NA	NA	NA
WP_096693810.1\|712103_713222_-\|tail	phage tail sheath family protein	H6WFT7	Cyanophage	1.7e-19	28.0

DBSCAN-SWA_2

3039407 : 3104502

Bacillus_virus(22.22%)

holin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096687065.1\|3039407_3040205_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	9.5e-52	44.7
WP_096687067.1\|3040575_3040917_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096687069.1\|3041201_3041783_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_096687070.1\|3042294_3042666_-\|protease	clan AA aspartic protease	NA	NA	NA	NA
WP_096687072.1\|3042662_3042941_-	hypothetical protein	NA	NA	NA	NA
WP_096687074.1\|3043223_3044333_+	C1 family peptidase	A0A1V0SLQ7	Klosneuvirus	2.0e-28	32.9
WP_096687076.1\|3044450_3046211_-	gamma-glutamyltransferase	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	4.1e-07	24.8
WP_096687078.1\|3046292_3046472_-	hypothetical protein	NA	NA	NA	NA
WP_096694094.1\|3046524_3047796_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	5.9e-157	64.2
WP_096729075.1\|3048181_3048553_+	hypothetical protein	NA	NA	NA	NA
WP_096687082.1\|3048640_3049972_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_096687083.1\|3050724_3051012_+	hypothetical protein	NA	NA	NA	NA
WP_096687085.1\|3051142_3051676_+	hypothetical protein	NA	NA	NA	NA
WP_096687087.1\|3052037_3052571_+	hypothetical protein	NA	NA	NA	NA
WP_096687089.1\|3053270_3054392_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_096687091.1\|3054491_3054671_+	hypothetical protein	NA	NA	NA	NA
WP_096687093.1\|3054711_3056187_-	hypothetical protein	NA	NA	NA	NA
WP_096687094.1\|3056625_3056913_+	hypothetical protein	NA	NA	NA	NA
WP_096687096.1\|3057846_3059385_+	spermidine synthase	A0A1C9C533	Heterosigma_akashiwo_virus	5.9e-10	30.1
WP_096687098.1\|3059381_3060317_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_096687100.1\|3060390_3060678_-	hypothetical protein	NA	NA	NA	NA
WP_096687102.1\|3060899_3062411_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA
WP_096687104.1\|3062571_3063849_-	S41 family peptidase	NA	NA	NA	NA
WP_096687106.1\|3063880_3064783_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_096687108.1\|3064775_3065231_-	hypothetical protein	NA	NA	NA	NA
WP_096687110.1\|3066979_3067954_+	nitrogenase iron protein	NA	NA	NA	NA
WP_096687112.1\|3068324_3068588_-	hypothetical protein	NA	NA	NA	NA
WP_096687114.1\|3068845_3069037_-	hypothetical protein	NA	NA	NA	NA
WP_096687116.1\|3070697_3070907_+	hypothetical protein	NA	NA	NA	NA
WP_096687118.1\|3070987_3071590_-	heme-copper oxidase subunit III	NA	NA	NA	NA
WP_096687120.1\|3073287_3074667_+	nitrogen fixation protein NifH	A0A1L2BX46	Bacteriophage	6.9e-18	25.9
WP_096687122.1\|3076110_3077103_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_096687124.1\|3077308_3078841_-\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	1.9e-72	34.7
WP_096687126.1\|3079388_3079757_+	hypothetical protein	NA	NA	NA	NA
WP_096694096.1\|3081142_3081436_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096694099.1\|3081490_3082303_+	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_096687128.1\|3082259_3083138_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_096687130.1\|3083134_3083983_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_096687132.1\|3083979_3084768_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-13	30.2
WP_096687134.1\|3084992_3088277_-	hypothetical protein	NA	NA	NA	NA
WP_096687136.1\|3088360_3088702_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_096687138.1\|3088962_3089319_+	hypothetical protein	NA	NA	NA	NA
WP_096694101.1\|3089646_3089859_+	hypothetical protein	NA	NA	NA	NA
WP_096687140.1\|3090299_3090986_-	hypothetical protein	NA	NA	NA	NA
WP_096687142.1\|3091282_3091465_+	hypothetical protein	NA	NA	NA	NA
WP_096687144.1\|3091599_3095196_+	hypothetical protein	NA	NA	NA	NA
WP_096687146.1\|3095743_3097231_+	FAD-binding protein	NA	NA	NA	NA
WP_096687148.1\|3097517_3098477_-	putative 2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_096687150.1\|3098535_3098748_-	hypothetical protein	NA	NA	NA	NA
WP_096687152.1\|3098902_3100117_-	DUF1624 domain-containing protein	NA	NA	NA	NA
WP_096687154.1\|3100293_3100515_+	hypothetical protein	NA	NA	NA	NA
WP_096687156.1\|3100878_3101112_+	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_096687158.1\|3101690_3102653_-	hypothetical protein	NA	NA	NA	NA
WP_096694103.1\|3102909_3104502_+\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	1.1e-59	32.8

DBSCAN-SWA_3

4093475 : 4156748

Lactococcus_phage(33.33%)

plate,transposase,integrase

attL 4087051:4087066|attR 4125722:4125737

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4087051:4087066	attL	NA	NA	NA	NA
WP_096688051.1\|4093475_4094651_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8BMN3	Lactococcus_phage	5.5e-08	24.0
WP_096688052.1\|4094907_4095213_+	hypothetical protein	NA	NA	NA	NA
WP_096688053.1\|4095551_4096082_+	hypothetical protein	NA	NA	NA	NA
WP_096688054.1\|4096543_4096753_-	hypothetical protein	NA	NA	NA	NA
WP_096688055.1\|4096846_4097146_+	hypothetical protein	NA	NA	NA	NA
WP_096688056.1\|4097145_4097331_+	hypothetical protein	NA	NA	NA	NA
WP_096688057.1\|4097413_4097626_+	hypothetical protein	NA	NA	NA	NA
WP_096688058.1\|4097618_4097840_+	hypothetical protein	NA	NA	NA	NA
WP_096688059.1\|4097842_4098049_+	hypothetical protein	NA	NA	NA	NA
WP_096688060.1\|4098178_4099300_+	ATP-binding protein	NA	NA	NA	NA
WP_096688061.1\|4099676_4102295_+	DUF3854 domain-containing protein	NA	NA	NA	NA
WP_096688062.1\|4102942_4104154_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_096688063.1\|4104479_4104776_+	hypothetical protein	NA	NA	NA	NA
WP_096688064.1\|4104858_4105644_-	hypothetical protein	NA	NA	NA	NA
WP_096688065.1\|4105719_4107141_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_096688066.1\|4107176_4108562_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_096688067.1\|4108894_4109473_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.8e-10	29.4
WP_096688068.1\|4109528_4111085_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA
WP_096688069.1\|4111200_4111428_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_096729093.1\|4111493_4111922_-	hypothetical protein	NA	NA	NA	NA
WP_096688071.1\|4112114_4113659_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA
WP_096688072.1\|4113863_4114874_-	MFS transporter	NA	NA	NA	NA
WP_096688073.1\|4114976_4115948_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096688074.1\|4116137_4117049_-	aromatic alcohol reductase	NA	NA	NA	NA
WP_096688075.1\|4117191_4118205_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_096688076.1\|4118279_4120499_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_096688077.1\|4120557_4121550_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
WP_096688078.1\|4121678_4122335_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_096688079.1\|4123061_4123313_-	hypothetical protein	NA	NA	NA	NA
WP_096688080.1\|4123470_4123833_-	group 1 truncated hemoglobin	NA	NA	NA	NA
WP_096688081.1\|4124130_4124871_-	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_096688082.1\|4124973_4125582_+	hypothetical protein	NA	NA	NA	NA
WP_096688083.1\|4126178_4131998_+	phytase	NA	NA	NA	NA
4125722:4125737	attR	NA	NA	NA	NA
WP_096688084.1\|4132293_4132632_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_096688085.1\|4132628_4132919_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_096688086.1\|4133390_4133858_-	peroxiredoxin	NA	NA	NA	NA
WP_096688087.1\|4133889_4134420_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_096688088.1\|4134456_4134999_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_096688089.1\|4135117_4135381_+	hypothetical protein	NA	NA	NA	NA
WP_096694164.1\|4135380_4135815_+	PIN domain-containing protein	NA	NA	NA	NA
WP_096688090.1\|4135854_4136331_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_096688091.1\|4136424_4139046_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	1.3e-41	24.2
WP_096694165.1\|4139344_4139551_-	hypothetical protein	NA	NA	NA	NA
WP_096688092.1\|4139770_4140529_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_096688093.1\|4140597_4141290_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_096688094.1\|4141422_4142295_+	aldo/keto reductase	NA	NA	NA	NA
WP_096688095.1\|4142531_4142786_+	RNA-binding protein	NA	NA	NA	NA
WP_096688096.1\|4142816_4143125_+	hypothetical protein	NA	NA	NA	NA
WP_096688097.1\|4143394_4144390_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_096688098.1\|4144481_4144694_-	hypothetical protein	NA	NA	NA	NA
WP_096688099.1\|4144814_4145717_-	hypothetical protein	NA	NA	NA	NA
WP_096688100.1\|4145764_4147207_-	hypothetical protein	NA	NA	NA	NA
WP_096688101.1\|4147257_4149483_-	hypothetical protein	NA	NA	NA	NA
WP_096688102.1\|4149507_4152828_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_096688103.1\|4152931_4155517_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_096688104.1\|4155516_4155876_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_073619013.1\|4155872_4156196_-	hypothetical protein	NA	NA	NA	NA
WP_096688105.1\|4156214_4156748_-\|plate	baseplate assembly protein	NA	NA	NA	NA

DBSCAN-SWA_4

4677219 : 4744193

Pseudomonas_phage(14.29%)

tRNA,transposase,integrase

attL 4681977:4681994|attR 4717874:4717891

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096688511.1\|4677219_4677699_+\|transposase	transposase	NA	NA	NA	NA
WP_096688512.1\|4678027_4678750_-	hypothetical protein	NA	NA	NA	NA
WP_096688513.1\|4678851_4679172_-	hypothetical protein	NA	NA	NA	NA
WP_096688514.1\|4679175_4679847_-	hypothetical protein	NA	NA	NA	NA
WP_096688515.1\|4679870_4681253_-	hypothetical protein	NA	NA	NA	NA
WP_096688516.1\|4681245_4682205_-	hypothetical protein	NA	NA	NA	NA
4681977:4681994	attL	NA	NA	NA	NA
WP_096729098.1\|4682254_4682533_-	hypothetical protein	NA	NA	NA	NA
WP_096688518.1\|4682550_4683177_-	hypothetical protein	NA	NA	NA	NA
WP_096688519.1\|4683145_4683535_-	hypothetical protein	NA	NA	NA	NA
WP_096688520.1\|4684384_4684666_+	hypothetical protein	NA	NA	NA	NA
WP_096688521.1\|4684665_4685061_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_096694196.1\|4685144_4685465_-	hypothetical protein	NA	NA	NA	NA
WP_096688522.1\|4686836_4687055_-	hypothetical protein	NA	NA	NA	NA
WP_096688523.1\|4687497_4690965_+	hypothetical protein	NA	NA	NA	NA
WP_096688524.1\|4693627_4694881_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	3.3e-67	38.8
WP_096688525.1\|4698259_4698898_-\|transposase	IS607 family transposase	M1I5D0	Acanthocystis_turfacea_Chlorella_virus	1.1e-29	40.7
WP_096688526.1\|4699509_4700106_+	hypothetical protein	NA	NA	NA	NA
WP_096688527.1\|4700504_4701806_-	urea ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_096688528.1\|4701938_4702505_-	hypothetical protein	NA	NA	NA	NA
WP_096688529.1\|4702635_4702878_+	hypothetical protein	NA	NA	NA	NA
WP_096694197.1\|4703202_4704345_+\|transposase	transposase	NA	NA	NA	NA
WP_096688530.1\|4704933_4705230_+	hypothetical protein	NA	NA	NA	NA
WP_096688531.1\|4705858_4707010_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_096688532.1\|4707469_4709656_-	peptidoglycan DD-metalloendopeptidase family protein	A0A075BS18	Microcystis_phage	6.9e-28	49.2
WP_096688533.1\|4710545_4711007_-\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_096688534.1\|4711342_4712494_-	glutamate--cysteine ligase	NA	NA	NA	NA
WP_096688535.1\|4712641_4713559_-	histone deacetylase	A0A2K9L2T7	Tupanvirus	4.9e-12	26.9
WP_096688536.1\|4715119_4715725_-	HPP family protein	NA	NA	NA	NA
WP_096688537.1\|4716592_4717375_-	hypothetical protein	NA	NA	NA	NA
WP_096683798.1\|4718506_4719763_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	6.6e-76	41.4
4717874:4717891	attR	NA	NA	NA	NA
WP_096688539.1\|4720850_4721621_+	cysteine hydrolase	NA	NA	NA	NA
WP_096688540.1\|4721717_4722161_+	cupin domain-containing protein	NA	NA	NA	NA
WP_096688541.1\|4722348_4723140_+	hypothetical protein	NA	NA	NA	NA
WP_096688542.1\|4723578_4723869_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_096688543.1\|4723882_4724122_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_096688544.1\|4725980_4726856_-	hypothetical protein	NA	NA	NA	NA
WP_096688545.1\|4727175_4727412_+	hypothetical protein	NA	NA	NA	NA
WP_096688546.1\|4727461_4729309_-	histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	3.4e-20	32.1
WP_096688547.1\|4729839_4730016_+	photosystem I reaction center subunit XII	NA	NA	NA	NA
WP_096688548.1\|4730077_4732147_-	flavin-dependent dehydrogenase	NA	NA	NA	NA
WP_073623285.1\|4732306_4732537_+	hypothetical protein	NA	NA	NA	NA
WP_096688549.1\|4732686_4733733_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	2.1e-19	24.9
WP_096688550.1\|4733952_4735563_-	citramalate synthase	NA	NA	NA	NA
WP_096688551.1\|4735697_4736036_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_096688552.1\|4736089_4736422_+	hypothetical protein	NA	NA	NA	NA
WP_096688553.1\|4736648_4738613_+	glycine oxidase ThiO	NA	NA	NA	NA
WP_096688554.1\|4739268_4741458_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_096688555.1\|4741488_4741875_-	hypothetical protein	NA	NA	NA	NA
WP_096688556.1\|4742318_4742504_-	hypothetical protein	NA	NA	NA	NA
WP_096688557.1\|4742567_4744193_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA

DBSCAN-SWA_5

5633231 : 5697474

Agrobacterium_phage(11.11%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096689217.1\|5633231_5633825_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.2e-44	50.8
WP_096689218.1\|5633963_5634629_-\|protease	ATP-dependent Clp protease proteolytic subunit	G3M9Z8	Bacillus_virus	2.2e-22	38.3
WP_096689219.1\|5634948_5636196_+	VWA domain-containing protein	NA	NA	NA	NA
WP_096689220.1\|5636272_5636656_+	VOC family protein	NA	NA	NA	NA
WP_096689221.1\|5636801_5638658_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_096689222.1\|5638788_5639955_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_096689223.1\|5640246_5640876_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_096689224.1\|5640868_5641636_-	sucrose-phosphate phosphatase	NA	NA	NA	NA
WP_096689225.1\|5641889_5642459_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_096689226.1\|5642495_5642723_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_096689227.1\|5643018_5643366_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_096689228.1\|5643449_5644670_-	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	1.2e-26	25.6
WP_096689229.1\|5645292_5646393_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	4.0e-109	59.9
WP_096689230.1\|5647317_5647518_+	hypothetical protein	NA	NA	NA	NA
WP_096689231.1\|5647591_5647981_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_096689232.1\|5648059_5648560_-	hypothetical protein	NA	NA	NA	NA
WP_096694247.1\|5648683_5649046_-	hypothetical protein	NA	NA	NA	NA
WP_096689233.1\|5649152_5649836_-	magnesium protoporphyrin IX methyltransferase	NA	NA	NA	NA
WP_096689234.1\|5650222_5651332_+	HlyD family secretion protein	NA	NA	NA	NA
WP_096689235.1\|5651490_5652753_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_096689236.1\|5652814_5653333_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.7e-25	45.0
WP_096689237.1\|5653877_5654957_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_096689238.1\|5655046_5655832_-	PIG-L family deacetylase	NA	NA	NA	NA
WP_096689239.1\|5656848_5658048_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_096729108.1\|5658096_5659344_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_096689241.1\|5659371_5660730_-	AAA family ATPase	R4TQL5	Phaeocystis_globosa_virus	4.0e-34	35.3
WP_096689242.1\|5660925_5661687_-	hypothetical protein	NA	NA	NA	NA
WP_096689243.1\|5661788_5662709_+	hypothetical protein	NA	NA	NA	NA
WP_096694248.1\|5662773_5663052_-	DUF4351 domain-containing protein	NA	NA	NA	NA
WP_096689244.1\|5663315_5664278_-	DUF4351 domain-containing protein	NA	NA	NA	NA
WP_096689245.1\|5664634_5665543_+	hypothetical protein	NA	NA	NA	NA
WP_096689246.1\|5665549_5665999_+	ATP-binding protein	NA	NA	NA	NA
WP_096689247.1\|5665988_5666762_+	guanylyltransferase	A0A0K2D0E0	Bacillus_phage	6.4e-21	30.9
WP_096689248.1\|5667258_5667570_+	hypothetical protein	NA	NA	NA	NA
WP_096689249.1\|5667742_5668420_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_096694249.1\|5668467_5669394_+	DUF1822 family protein	NA	NA	NA	NA
WP_096689250.1\|5669632_5670229_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_096689251.1\|5670520_5675020_+	CHAT domain-containing protein	NA	NA	NA	NA
WP_096689252.1\|5675213_5676032_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_096689253.1\|5676285_5679324_-\|protease	serine protease	NA	NA	NA	NA
WP_096689254.1\|5679328_5679766_-	hypothetical protein	NA	NA	NA	NA
WP_096689255.1\|5679760_5679958_+	hypothetical protein	NA	NA	NA	NA
WP_096689256.1\|5680038_5680272_-	hypothetical protein	NA	NA	NA	NA
WP_096689257.1\|5680290_5682513_-	M15 family metallopeptidase	N0DQR5	Edwardsiella_phage	2.0e-30	46.8
WP_096689258.1\|5682524_5682803_-	hypothetical protein	NA	NA	NA	NA
WP_096689259.1\|5682955_5683117_+	hypothetical protein	NA	NA	NA	NA
WP_096689260.1\|5683602_5683842_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096689261.1\|5683954_5684155_+	hypothetical protein	NA	NA	NA	NA
WP_096689262.1\|5684151_5684460_+	hypothetical protein	NA	NA	NA	NA
WP_096689263.1\|5684926_5685310_+	hypothetical protein	NA	NA	NA	NA
WP_096729110.1\|5686181_5689418_-\|protease	serine protease	NA	NA	NA	NA
WP_096689264.1\|5689744_5690305_-	hypothetical protein	NA	NA	NA	NA
WP_096689265.1\|5691235_5692162_+	hypothetical protein	NA	NA	NA	NA
WP_096689267.1\|5692573_5695513_-\|protease	serine protease	NA	NA	NA	NA
WP_096689268.1\|5695703_5696264_-	hypothetical protein	NA	NA	NA	NA
WP_096689269.1\|5696325_5697474_-\|protease	trypsin-like serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	7.8e-07	24.5

DBSCAN-SWA_6

6104794 : 6159498

Lactobacillus_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096689599.1\|6104794_6105652_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_096689600.1\|6105958_6106489_+	DUF4330 domain-containing protein	NA	NA	NA	NA
WP_096689601.1\|6106490_6107855_-\|transposase	transposase	A0A2K9VD04	Lactobacillus_phage	7.6e-17	25.6
WP_096689602.1\|6107935_6108355_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.3e-25	48.4
WP_096689603.1\|6108749_6109745_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_096689604.1\|6110027_6110321_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	V5UTY8	Synechococcus_phage	2.9e-35	78.7
WP_096694271.1\|6110474_6112133_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	1.4e-12	26.5
WP_096689605.1\|6112350_6112614_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_096689606.1\|6113212_6113887_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_096694272.1\|6114639_6114969_+	STAS domain-containing protein	NA	NA	NA	NA
WP_096689607.1\|6114975_6116109_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_096689608.1\|6116155_6116953_-	DUF1350 domain-containing protein	NA	NA	NA	NA
WP_096689609.1\|6117104_6117824_-	hypothetical protein	NA	NA	NA	NA
WP_096689610.1\|6118151_6118592_-	hypothetical protein	NA	NA	NA	NA
WP_096689611.1\|6119200_6120502_+	sodium:proton antiporter	NA	NA	NA	NA
WP_096689612.1\|6120581_6121004_+	DUF2294 domain-containing protein	NA	NA	NA	NA
WP_096689613.1\|6120966_6121419_-	response regulator	NA	NA	NA	NA
WP_096689614.1\|6121893_6122982_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_096689615.1\|6123226_6124927_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_096689616.1\|6125450_6125849_-\|protease	retroviral-like aspartic protease	NA	NA	NA	NA
WP_096689617.1\|6125841_6126102_-	DUF2281 domain-containing protein	NA	NA	NA	NA
WP_096689618.1\|6126596_6130337_-	hypothetical protein	NA	NA	NA	NA
WP_096689619.1\|6130445_6131750_-	AAA family ATPase	NA	NA	NA	NA
WP_096689620.1\|6131956_6132517_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_096689621.1\|6132781_6133825_-	Fic family protein	NA	NA	NA	NA
WP_096683798.1\|6134715_6135972_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	6.6e-76	41.4
WP_096689622.1\|6138247_6139195_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_096689623.1\|6139372_6140887_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_096689624.1\|6141113_6141665_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_096689625.1\|6141665_6142217_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_096689626.1\|6142378_6142807_-	F0F1 ATP synthase subunit B'	NA	NA	NA	NA
WP_019493624.1\|6143008_6143257_-	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_096689627.1\|6143353_6144106_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_096689628.1\|6144226_6144664_-	ATP synthase subunit I	NA	NA	NA	NA
WP_096689629.1\|6145097_6146285_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_096689630.1\|6146880_6148032_+	DNA cytosine methyltransferase	A0A191SB20	Nostoc_phage	1.5e-29	28.3
WP_096689631.1\|6148045_6148756_+	hypothetical protein	NA	NA	NA	NA
WP_096689632.1\|6148761_6149169_-	hypothetical protein	NA	NA	NA	NA
WP_096689633.1\|6149595_6152916_+	photosystem I reaction center subunit X	NA	NA	NA	NA
WP_096689634.1\|6153470_6153956_+	allophycocyanin	NA	NA	NA	NA
WP_019493631.1\|6154058_6154544_+	allophycocyanin subunit beta	NA	NA	NA	NA
WP_096689635.1\|6154837_6155041_+	photosystem I reaction center subunit XII	NA	NA	NA	NA
WP_096689636.1\|6155182_6155440_+	hypothetical protein	NA	NA	NA	NA
WP_096689637.1\|6155725_6156922_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_096694273.1\|6157059_6157359_+	type II toxin-antitoxin system HigB family toxin	A0A0P0ZE17	Stx2-converting_phage	1.8e-11	35.2
WP_096689638.1\|6157321_6157747_+	transcriptional regulator	NA	NA	NA	NA
WP_096689639.1\|6157827_6159498_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA

DBSCAN-SWA_7

6532398 : 6584788

Bacillus_phage(40.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096689929.1\|6532398_6533922_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA
WP_096689930.1\|6533963_6534545_-\|transposase	IS607 family transposase	A0A2P1EMJ6	Moumouvirus	9.3e-33	39.0
WP_096689931.1\|6534696_6535050_+	hypothetical protein	NA	NA	NA	NA
WP_096689932.1\|6535133_6535685_+	heme NO-binding protein	NA	NA	NA	NA
WP_096689933.1\|6535698_6537030_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_096694305.1\|6537128_6538145_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_096689934.1\|6538320_6539514_-	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_096694306.1\|6540142_6540418_+	hypothetical protein	NA	NA	NA	NA
WP_096689935.1\|6540429_6540849_+	hypothetical protein	NA	NA	NA	NA
WP_096694307.1\|6541336_6542224_-	type I secretion C-terminal target domain-containing protein	A0A0E3T7R5	Bacillus_phage	9.0e-27	47.0
WP_096689936.1\|6543411_6544164_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_096689937.1\|6544160_6547097_+	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	1.1e-49	33.5
WP_096689938.1\|6547628_6549470_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_096689939.1\|6549899_6550577_+	hypothetical protein	NA	NA	NA	NA
WP_096689940.1\|6550609_6552493_+	hypothetical protein	NA	NA	NA	NA
WP_096689941.1\|6552495_6554010_+	DUF1802 family protein	NA	NA	NA	NA
WP_096689942.1\|6554033_6554372_-\|protease	aspartyl protease	NA	NA	NA	NA
WP_096689943.1\|6554368_6554686_-	hypothetical protein	NA	NA	NA	NA
WP_096689944.1\|6555297_6555972_+	hypothetical protein	NA	NA	NA	NA
WP_096689945.1\|6555999_6557793_+	hypothetical protein	NA	NA	NA	NA
WP_096689946.1\|6557794_6559261_+	DUF1802 family protein	NA	NA	NA	NA
WP_096689947.1\|6559261_6559627_-\|protease	aspartyl protease	NA	NA	NA	NA
WP_096694308.1\|6559623_6559941_-	hypothetical protein	NA	NA	NA	NA
WP_096689948.1\|6560471_6560888_+	hypothetical protein	NA	NA	NA	NA
WP_096689949.1\|6562084_6562402_-	hypothetical protein	NA	NA	NA	NA
WP_096689950.1\|6562491_6564690_-	hypothetical protein	NA	NA	NA	NA
WP_096689951.1\|6564784_6565150_-\|protease	aspartyl protease	NA	NA	NA	NA
WP_096689952.1\|6565146_6565464_-	hypothetical protein	NA	NA	NA	NA
WP_096689953.1\|6566168_6566636_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	NA	NA	NA
WP_096689954.1\|6566824_6568411_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_096689955.1\|6568496_6568772_-	cytotoxic translational repressor of toxin-antitoxin stability system	NA	NA	NA	NA
WP_096689956.1\|6568789_6568987_-	hypothetical protein	NA	NA	NA	NA
WP_096689957.1\|6569333_6570623_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_096689958.1\|6570697_6571828_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_096689959.1\|6571846_6573394_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_096689960.1\|6573427_6574210_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-12	24.2
WP_096689961.1\|6574354_6575068_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-15	26.7
WP_096689962.1\|6575229_6575502_+	DUF3303 domain-containing protein	NA	NA	NA	NA
WP_096689963.1\|6575516_6575708_+	hypothetical protein	NA	NA	NA	NA
WP_096689964.1\|6575704_6576286_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_096689965.1\|6576504_6579216_-	hypothetical protein	NA	NA	NA	NA
WP_096689966.1\|6579510_6580014_-	hypothetical protein	NA	NA	NA	NA
WP_096689967.1\|6580221_6581448_-	bifunctional sterol desaturase/short chain dehydrogenase	NA	NA	NA	NA
WP_096689968.1\|6581698_6582928_+	glycoside hydrolase family 10 protein	NA	NA	NA	NA
WP_096689969.1\|6583165_6584788_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	NA	NA	NA	NA

DBSCAN-SWA_8

9395425 : 9453318

Streptomyces_phage(28.57%)

plate,tRNA,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096692111.1\|9395425_9395842_+\|protease	aspartyl protease	NA	NA	NA	NA
WP_096692112.1\|9396041_9396404_+	hypothetical protein	NA	NA	NA	NA
WP_096692113.1\|9396697_9397066_+	hypothetical protein	NA	NA	NA	NA
WP_096692114.1\|9397069_9399037_+	hypothetical protein	NA	NA	NA	NA
WP_096692115.1\|9399038_9399713_+	OmpA family protein	NA	NA	NA	NA
WP_096692116.1\|9399709_9401155_+	hypothetical protein	NA	NA	NA	NA
WP_096692117.1\|9401577_9401808_-	hypothetical protein	NA	NA	NA	NA
WP_096692118.1\|9403074_9403284_+	hypothetical protein	NA	NA	NA	NA
WP_096692119.1\|9403270_9403543_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_096692120.1\|9403642_9404035_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_096692121.1\|9404031_9404286_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_096694490.1\|9404475_9404736_-	hypothetical protein	NA	NA	NA	NA
WP_096692122.1\|9405251_9408119_+\|tRNA	isoleucine--tRNA ligase	A0A2P1ELB8	Moumouvirus	1.3e-79	27.7
WP_096692123.1\|9408212_9408452_+	hypothetical protein	NA	NA	NA	NA
WP_096692124.1\|9408448_9408715_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088F8T3	Mycobacterium_phage	1.1e-15	51.2
WP_096694491.1\|9408765_9409077_-	hypothetical protein	NA	NA	NA	NA
WP_096692125.1\|9409512_9409728_+	DUF4926 domain-containing protein	NA	NA	NA	NA
WP_096692126.1\|9410157_9411549_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_096692127.1\|9413938_9414493_+	hypothetical protein	NA	NA	NA	NA
WP_096692128.1\|9414674_9415148_+	hypothetical protein	NA	NA	NA	NA
WP_096692129.1\|9415149_9416232_-	sensor histidine kinase	NA	NA	NA	NA
WP_096692130.1\|9416248_9417433_-	hypothetical protein	NA	NA	NA	NA
WP_096692131.1\|9417648_9419619_-	FHA domain-containing protein	NA	NA	NA	NA
WP_096692132.1\|9419714_9420269_-	FHA domain-containing protein	NA	NA	NA	NA
WP_096692133.1\|9420455_9421121_-	deoxyribonuclease V	NA	NA	NA	NA
WP_096692134.1\|9421585_9422509_-	hypothetical protein	NA	NA	NA	NA
WP_096692135.1\|9422654_9424958_-	hypothetical protein	NA	NA	NA	NA
WP_096692136.1\|9424984_9427237_-	hypothetical protein	NA	NA	NA	NA
WP_096692137.1\|9427306_9429469_-	CHASE2 domain-containing protein	A0A2H4UU60	Bodo_saltans_virus	2.1e-08	25.5
WP_096692138.1\|9429672_9431547_-	FHA domain-containing protein	NA	NA	NA	NA
WP_096692139.1\|9431717_9432092_-	hypothetical protein	NA	NA	NA	NA
WP_096692140.1\|9432156_9432495_-	hypothetical protein	NA	NA	NA	NA
WP_096692141.1\|9432515_9433007_-\|tail	phage tail protein	NA	NA	NA	NA
WP_096692142.1\|9433028_9433484_-\|tail	phage tail protein	NA	NA	NA	NA
WP_096692143.1\|9433691_9435359_-\|tail	phage tail sheath family protein	A0A1J0GW47	Streptomyces_phage	2.8e-37	30.3
WP_096692144.1\|9435437_9436298_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_096692145.1\|9436665_9437787_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_096692146.1\|9437776_9438451_+	response regulator transcription factor	NA	NA	NA	NA
WP_096692147.1\|9438480_9440655_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_096692148.1\|9440626_9441238_+	FHA domain-containing protein	NA	NA	NA	NA
WP_096692149.1\|9441289_9442357_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_096694492.1\|9442717_9442957_+	hypothetical protein	NA	NA	NA	NA
WP_096692150.1\|9442956_9443472_+\|tail	phage tail protein	NA	NA	NA	NA
WP_096692151.1\|9443825_9448109_+	hypothetical protein	A0A1L2BX61	Bacteriophage	5.9e-07	30.7
WP_096692152.1\|9448125_9448662_+	hypothetical protein	NA	NA	NA	NA
WP_096692153.1\|9448692_9450600_+	VgrG-related protein	NA	NA	NA	NA
WP_096692154.1\|9450695_9451112_+	GPW/gp25 family protein	A0A088FV58	Escherichia_phage	6.7e-09	42.7
WP_096692155.1\|9451119_9453318_+\|plate	putative baseplate assembly protein	A0A1J0GW37	Streptomyces_phage	8.5e-10	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP018256

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP018256_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018256_1

108378-108626

TypeI-A

A:N

Consensus_repeat	Method
TTTCAAACCACCCATAGCTGGAATGGTTATTGAAAC	CRISPRCasFinder
CCATAGCTGGAATGGTTATTGAAACT	CRT

3 spacers

TnpB_regular.1

The CRISPR arrays of NZ_AP018256_1

>merge|NZ_AP018256|1|108378-108626|CRISPRCasFinder,CRT
TTTCAAACCACCCATAGCTGGAATGGTTATTGAAACTATAATTCTGGGCGAAGTATACTTCCTTTCTGAGACTTTCAACCCACCCATAGCTGGAATGGTTATTGAAACACTGAAAAATCATAGTCCCGTTTCCAGCACTTCAAGCTTTCAACCCACCATAGCTGGAATGGTTATTGAAACTATGACAGGTTAAGGTTAGACCCGCCTGACCAAGAACTTTCAACCCACCCTGAAATGGTTATTGAAACT

>NZ_AP018256|1|1|108378-108557|CRISPRCasFinder
TTTCAAACCACCCATAGCTGGAATGGTTATTGAAAC	TATAATTCTGGGCGAAGTATACTTCCTTTCTGAGAC
TTTCAACCCACCCATAGCTGGAATGGTTATTGAAAC	ACTGAAAAATCATAGTCCCGTTTCCAGCACTTCAAG
CTTTCAACCCACCATAGCTGGAATGGTTATTGAAAC

>NZ_AP018256|1|1|108389-108626|CRT
CCATAGCTGGAATGGTTATTGAAACT	ATAATTCTGGGCGAAGTATACTTCCTTTCTGAGACTTTCAACCCAC
CCATAGCTGGAATGGTTATTGAAACA	CTGAAAAATCATAGTCCCGTTTCCAGCACTTCAAGCTTTCAACCCA
CCATAGCTGGAATGGTTATTGAAACT	ATGACAGGTTAAGGTTAGACCCGCCTGACCAAGAACTTTCAA
CCCACCCTGAAATGGTTATTGAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018256.1\|WP_096694744.1\|99865_100540_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694902.1\|110218_110887_-\|arsenical-resistance-protein-ArsH	unknown	unknown	gnl\|CDD\|274260
NZ_AP018256.1\|WP_096694743.1\|99387_99894_-\|plasmid-pRiA4b-ORF-3-family-protein	unknown	unknown	gnl\|CDD\|377943
NZ_AP018256.1\|WP_096694752.1\|110933_111194_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694742.1\|98216_98831_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694749.1\|105492_106464_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694747.1\|102431_103955_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	TnpB_regular.1	-	gnl\|CDD\|284650
NZ_AP018256.1\|WP_096694745.1\|100665_101217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694758.1\|118039_118435_-\|arsenate-reductase,-glutathione/glutaredoxin-type	unknown	unknown	gnl\|CDD\|131736
NZ_AP018256.1\|WP_096694750.1\|107168_107795_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694754.1\|112700_113708_+\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|169599
NZ_AP018256.1\|WP_096694753.1\|111325_112375_-\|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270372
NZ_AP018256.1\|WP_096694903.1\|115245_115878_-\|aquaporin	unknown	unknown	gnl\|CDD\|238204
NZ_AP018256.1\|WP_096694748.1\|104378_105332_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_AP018256.1\|WP_096694757.1\|116777_117950_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340928
NZ_AP018256.1\|WP_096694756.1\|116252_116711_+\|protein-phosphatase	unknown	unknown	gnl\|CDD\|350354
NZ_AP018256.1\|WP_096694751.1\|108747_108978_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694755.1\|113731_114991_+\|organoarsenical-effux-MFS-transporter-ArsJ	unknown	unknown	gnl\|CDD\|340883
NZ_AP018256.1\|WP_096694746.1\|101282_101753_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694741.1\|97290_98085_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018256.1\|WP_096694902.1\|110218_110887_-\|arsenical-resistance-protein-ArsH	gnl\|CDD\|274260	TIGR02690, arsenical_resistance_protein_ArsH_putative, arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (pfam03358). The function of ArsH is not known. [Cellular processes, Detoxification].	1.3484e-113
NZ_AP018256.1\|WP_096694753.1\|111325_112375_-\|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270372	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.40537e-136
NZ_AP018256.1\|WP_096694743.1\|99387_99894_-\|plasmid-pRiA4b-ORF-3-family-protein	gnl\|CDD\|377943	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein. Members of this family are similar to the protein product of ORF-3 found on plasmid pRiA4 in the bacterium Agrobacterium rhizogenes. This plasmid is responsible for tumorigenesis at wound sites of plants infected by this bacterium, but the ORF-3 product does not seem to be involved in the pathogenetic process. Other proteins found in this family are annotated as being putative TnpR resolvases, but no further evidence was found to back this. Moreover, another member of this family is described as a probable lexA repressor and in fact carries a LexA DNA binding domain (pfam01726), but no references were found to expand on this.	2.22222e-67
NZ_AP018256.1\|WP_096694748.1\|104378_105332_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	1.65514e-77
NZ_AP018256.1\|WP_096694756.1\|116252_116711_+\|protein-phosphatase	gnl\|CDD\|350354	cd14504, DUSP23, dual specificity phosphatase 23. Dual specificity phosphatase 23 (DUSP23), also known as VH1-like phosphatase Z (VHZ) or low molecular mass dual specificity phosphatase 3 (LDP-3), functions as a protein-serine/threonine phosphatase (EC 3.1.3.16) and a protein-tyrosine-phosphatase (EC 3.1.3.48). It deactivates its MAPK substrates by dephosphorylating the threonine and tyrosine residues in the conserved Thr-Xaa-Tyr motif residing in their activation sites. DUSP23 is an atypical DUSP; it contains the catalytic dual specificity phosphatase domain but lacks the N-terminal Cdc25/rhodanese-like domain that is present in typical DUSPs or MKPs. It is able to enhance activation of JNK and p38 MAPK, and has been shown to dephosphorylate p44-ERK1 (MAPK3) in vitro. It has been associated with cell growth and human primary cancers. It has also been identified as a cell-cell adhesion regulatory protein; it promotes the dephosphorylation of beta-catenin at Tyr 142 and enhances the interaction between alpha- and beta-catenin.	8.54364e-39
NZ_AP018256.1\|WP_096694757.1\|116777_117950_+\|MFS-transporter	gnl\|CDD\|340928	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily. This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.52263e-119
NZ_AP018256.1\|WP_096694903.1\|115245_115878_-\|aquaporin	gnl\|CDD\|238204	cd00333, MIP, Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.	1.58005e-53
NZ_AP018256.1\|WP_096694747.1\|102431_103955_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	3.47933e-06
NZ_AP018256.1\|WP_096694755.1\|113731_114991_+\|organoarsenical-effux-MFS-transporter-ArsJ	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.53255e-10
NZ_AP018256.1\|WP_096694758.1\|118039_118435_-\|arsenate-reductase,-glutathione/glutaredoxin-type	gnl\|CDD\|131736	TIGR02689, arsenate_reductase, arsenate reductase, glutathione/glutaredoxin type. Members of this protein family represent a novel form of arsenate reductase, using glutathione and glutaredoxin rather than thioredoxin for reducing equivalents as do some homologous arsenate reductases. An example of this type is Synechocystis sp. strain PCC 6803 slr0946, and of latter type (excluded from this model) is Staphylococcus aureus plasmid pI258 ArsC. Both are among the subset of arsenate reductases that belong the the low-molecular-weight protein-tyrosine phosphatase superfamily. [Cellular processes, Detoxification].	4.59514e-70
NZ_AP018256.1\|WP_096694754.1\|112700_113708_+\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|169599	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated.	0

>NZ_AP018256.1|WP_096694750.1|107168_107795_-|hypothetical-protein
MDNTFDLQYLNESFAIPFNKTYLVIRTYPISWRLYVVADTICKTTAMSTCESSNLSHENSCFSLKVLQFGKLWNLDGALSQEQDWQVHHDYKIASRDLCTDGEIITCDCSYPLFSALSTQLNAYNEPTEYWYYMTCLEDDNGRHIETCPNCGKVLQDEEDENLENENQPIACVGCKNYHGETYNKVPLICAIYPSGYDKSTICPDWQD
>NZ_AP018256.1|WP_096694749.1|105492_106464_-|hypothetical-protein
MQGIPYQLLNLNSILLPEYTYVDNTTNQLIIMKYNQMTIYMPTVTEVGTKYVQGINRETYIENPANNYWYLLEKVYASGESREYRIREIEYDYTAPLNRNIIEYRDFQEFFDENEAKRCLSSIMHAPSYLTIKGASSHSLFYAWKTPSGQYKKFNPIKSHVSMFNPKDKIDYSSIVPVIVLPNGKVVEDNLNHRDDLSIGFQQASSAYDADILLWNLNLAKNSLLSNSPDDAVLLYGHIAAFSIQLFGKLVPELFQAVFDVIAENQTDYFHSHNIDITKNIIDEQIHDMRKLHVKCGGLWCLENISNSRLMPRLILCNAYQKK
>NZ_AP018256.1|WP_096694748.1|104378_105332_-|DNA-cytosine-methyltransferase
MININSLRIIDLFAGCGGMSLGFANAKLNIIGAVDNWKPAINVYRKNFTHPIHNLDIGDKANWKFIRKTKCNFITGSPPCQDFSSAGSRNEDSGRGDLSIRFAELIEYIQPSIFVMENVERYQKSKKYKQVIEILKRNKYGLTEKVFNAAYCGVPQNRQRYICVGVFNGADHELLPYLNAGLSSKPMTVRDYFGDSLNIEHYYRHARSYKRRAVFSISEPSPTIRGTNRPIPPGYKGHPSDTAPINSKLRPLTTFERAAIQTFPSNFDFSNETNTNLEEMIGNAVPVKLAEFIANAIKSYLQTHNAVFSWLESAKLR
>NZ_AP018256.1|WP_096694747.1|102431_103955_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MNIVNKKPIQTTEYTVTRIAYSVGTINQSLIDLASVLGKLRSELWNKYGSLQSWGINKNEIIKNIRNDVKLRRICGAERFNLSSEIWERTVQAVLDDIHATQEAAKAQIIRKIYEHFKPERTLIQKGKKLVCVDIPETSFRQELIIAINSAYSVWHQYPILCRWVRQFYKRGHTWVNNQIVINATASSMKGKITKDGRSVTTYKIPTFMDGQKCQWVEIKIHTGRTCPKAGRLRLIFNGEKFELHYPHTTQVNAITKTDIIGLDKGFTEGFYGSNGQAYVETLGEVIKVASSKRTEKNKKRSVIFAISQKVDAQKSSRMFKSNLGRKKASKKDSVKRLYIKQLIRTDVNQIFNSFGEVVAEDLSKHIKGKKKAKAINRKLNEWSKGELQKALDEISVRKGAKVTLVNPAYTSQLDSNNGTLLGKRIGDQFISYQGVILQSDMNAAINIKNRALDSEITRFMKKEAVHKILLNRTVQFLEELGYTLEAAVYMGWLNSKHLIKVKTNCA
>NZ_AP018256.1|WP_096694746.1|101282_101753_-|hypothetical-protein
MEYADEEYDYELLDIYDQVCEEFDERNLPYVIPILQGKTAADYNCHLSQYGDAIQQNAWVGVGGLKRRPNSEVFSILTSIKMQRPDIKPHGYGLSKRQLDDNLIIGLLFSADSASGQLSGDKGTKYQNSRDPAISIAYARAIDELTIQTNIFNCYA
>NZ_AP018256.1|WP_096694745.1|100665_101217_-|hypothetical-protein
MLEKSYKLFIPAPHFLLEAMNVAKEAKEWIGIFYQATNATWSDGGWSATFSYFDVYYPLLHNEAMSIQLASVYQKIKPEYSIDFGSDDTEPSHILLLNRIDHQLYLADFKEGMKFLREQYPKPDPNKKAEITKEQLAQILLEHQKQVQECMQNPSSFGIFESFGSISTYRNKIITWFNNYCLN
>NZ_AP018256.1|WP_096694744.1|99865_100540_-|hypothetical-protein
MSVTAFSIVDGDTIEASNANYETYRDKLPVCGTCFGEICLARGEHKRTYWRHFPGVGIDCPDRSDIKSVVYKSIKNTSRKQSLALFRQRFLEILDIDIQPTVSISDTQQTLSFREPIMYNIAKLLPIKCNDRSSSFDTVIFEIYGKHRKRTDIITDQLKTARDLRIKALNDDLVAGWKSVASTIELMEQQLANPTRKNMKGFAKRLMGLESKVSRLERKQTSKK
>NZ_AP018256.1|WP_096694743.1|99387_99894_-|plasmid-pRiA4b-ORF-3-family-protein
MNENKLVKSNIKLGQLHNIVQEVMGWADYHLHSWSIRGVDYGVPHEDYDLGMRDEKNVKLSSLIGSSEKVKFSYMYDFGDSWEHEILIEKILPSAPNTYYPVCVAGKRACPPFDCGGVWGYAELLTILSDPENPEYEEKIEWLEGEFDPEYIDLSDINYRGYRRFSNI
>NZ_AP018256.1|WP_096694742.1|98216_98831_-|hypothetical-protein
MMQPGLEVYECPNYRTCSLANDLTVEEEVELIIVRQIQTSQKQGEFKYVHDKIRINRRQAAIMMLMSRACPQSLESLSIHELINQVGASLDQLRSRLTQFEGQYIAPESCEVHSYNVKRPRSHLTERGVESYRRAYQYNKLTAMKPIFEPFERQAKVRVIHLSRSDDPRNLEAREGIERRNKVTQVRTKLKLIEQALADALALL
>NZ_AP018256.1|WP_096694741.1|97290_98085_+|hypothetical-protein
MVMYSYPAPVDQLLTYGDASEIKEVPNYVEELGFSKNHIGALINIATDIELNSAHTDSLEVWAPIHAVRVLGQLRAEEAIQSLIDLFELDDDWMGNELPVALAAIGLSAINSLEAYLINSSNPYFQRIRVSGTLVKIAQIYPDTRDRCVAIITQQLEKCADNPTDMNACLVGDLIEPNAVKSAPVIERAFAAKKVMPILAGDWDEVQVSLGLKTREEVPIRRFTLKEMSEALGIEQLVSEPRGFAKTESKTSKKKSAKKNKKRK
>NZ_AP018256.1|WP_096694751.1|108747_108978_-|hypothetical-protein
MLIFRNRKRGIGALPAKKSIAEKLEPLHNCITVRTTSVVATESPPSSGEPSKYFFWRIEAEVKSLESRQNIKILIW
>NZ_AP018256.1|WP_096694902.1|110218_110887_-|arsenical-resistance-protein-ArsH
MTTFDHKPRILFLYGSLRERSYSRLLAEEAARIIEGYGAEVRFFDPRELPIHRSVPDTHPKVQELRELSQWSEGQVWSSPELHGNVSGIMKNQIDWIPLNIGSIRPTQGRTLAVMQVSGGSQSFNAVNTLRLLGRWMRMFTIPNQSSVPKAYEEFHEDGTMKDSPYRDRVIDVMEELYKFTMLLRSQIDYLTDRYSERKEKAAKEAITLAKPLEMNSGKGKL
>NZ_AP018256.1|WP_096694752.1|110933_111194_-|hypothetical-protein
MKNGELFKRCLLACEAAAVSAGFMPETGRDLYLGQITRKIQSWSEEQYGKWVVFMVELHGEKSSDGIELAMLFEEVCHIMIKYGTL
>NZ_AP018256.1|WP_096694753.1|111325_112375_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein
MNTVVKLALVSGILALASCTSTSNQSTQTQQVPSASAVSNSQTISTIKVDGSSTVYPITAAIAKEYQAQNKQVQIAVNFSGTGGGFKKFCAGETDISNASRPITTEEMEACRKNNIAYIEIPVAFDALTIVVNPQNNWAKDITVEELKKMWEPAAEGKITNWSQVRSSWPNQPLKLFGAGKDSGTFDYFTEATVGKARASRNDYTPSEDDEVIAKGVSNDPNALGYFGYAYYQEHKDKLKVVPVDNGKGAVLPETKTVENAQYQPLSRPLFIYVNPQRIVGKGEAYQFANFYLQKAPSVASSVGYVPLPDEAYRIGYVHLNTDKVGTVYAGKPQLDLTIAEVLRKQKQF
>NZ_AP018256.1|WP_096694754.1|112700_113708_+|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase
MTIRVGINGFGRIGRLALRAAWGWSDIEFVHINEIKGGAVTSAHLLKFDSVHGRWAPDVAAKEDNILIDGKPLSFSEYSEPGKVDWADFGVDIVLESSGKFRTPETLAPYFDRGVKKVIVAAPVKEEALNIVMGVNDYLYEPEKHHLLTAASCTTNCLAPVVKVIHEGLGIKHGLVTTIHDHTNTQIVVDAPHKDLRRARAGGMSLIPTTTGSATAIGLIYPELNGKLNGLAVRVPLLNASLTDCVFEVTRPTTVEEVNSLLKAAAEGELRGILGYEELPLVSIDYKDDPRSSIIDALSTMVIDETQVKILAWYDNEWGYANRMVELARKVALSL
>NZ_AP018256.1|WP_096694755.1|113731_114991_+|organoarsenical-effux-MFS-transporter-ArsJ
MTTTASSANLRNYILVTLAYWGFTITDGALRMLVLLYFNNIGYTPIQIASLFLFYEVFGVVTNFLGGWIGSQFGLKVTLYTGIGLQVFSLIMLSGLNPTWPQWIAVLFVMVAQAFSGVAKDLTKMSTKSAIRLVVPQDAQSSLFKWVAILTGSKNALKGVGFFVGSALLSLVGFINALWIMAAGLFLLMFSGLMLPKGMGKIKKKVKFTQLFSKSQEINVLSAARFFLFGSRDVWFVVGLPVFLRSVLGWSFYQVGGFLAIWVIAYGIVQSSAPTLLKRFGSGRPPTASTIQFWTFTLTAVPALIAIGLQAGIEPNTVIIAGLLLFGLVFAFNSAVHSYLVLAFTDDDKVALNVGFYYMANSAGRLAGTVLSGVIYQAFGLIGCLWTSMLFILAAGLVSLKLPNPQPSKDIAWKAGEGD
>NZ_AP018256.1|WP_096694903.1|115245_115878_-|aquaporin
MLAEAIGTFILVFAGTGAVMVNQIGQGAITHVGISFVFGAVVAALIYSMGHTSGAHFNPAVTLALWTSGFFPARQVLQYILSQLFGAVAASFMLLISLGRVANLGATLPLHGNWLQSLILETILTCILMFVIFGSGLDKRAHVGFAPLAIGLTVGLEALFMGPITGASMNPARSFSPAFVGGIWQHHWIYWIGPILGGQLAVLLYNVLKE
>NZ_AP018256.1|WP_096694756.1|116252_116711_+|protein-phosphatase
MEQEQIQPIKENLWWVTRGKLAGVRKPMAEELTELQEKGIGAIVSVIHDRSNLDLYEQAGIPYIWLPINIGCSPSLEQIQQLQNFVDSQNRLGHAVAVHCTGGVHRTGTMLASYLIYNGLSYNDAMQKIQNANSFVELEEAQSSFLRSLAEA
>NZ_AP018256.1|WP_096694757.1|116777_117950_+|MFS-transporter
MEQGVSSKSSALRFVIILGIVSMCADATYEGARSITGAYLGILGASGSVVGLVAGFGELIGYCFRLVIGYLSDSSRQYWKITTLGYFINTAAVPLLALAGSWQVAAALMLGERTGKAIRTPPRDVLLSHAALRLGGGFGFGLHEALDQIGAVLGPLAVAAVIYLGRGYQSSFAILLLPAVLGLIVLFVGQKIYPNPSDLEPKSAALTGEGLPRKFWIYLVAVTFIAAGYADFPLIAYHFQTKGIASSNIIPLFYALAMGVSGIAALGFGRLFDRFEIKVLLFAALLSSLFPPLVFFGGAKQALLGMVLWGAGMGAQESILKATVAMMVPPSRRGSAFGIFNSGYGLSWFLGSALMGILYDKSITMLVIFSVIIQLAAIPILLLVNRQTQI
>NZ_AP018256.1|WP_096694758.1|118039_118435_-|arsenate-reductase,-glutathione/glutaredoxin-type
MKRIMFVCKKNSRRSQMAEGFAWALGKGKVAVNSSGLEKSEVDPLAIKVMLEIDIDISDQTSKTLSNFKPENYDVVISLCGCGVNLPEEWVLREVFEDWQLDDPEGEDIEAFRKVRDQVKERVASLIESLN

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Crispr_ID: NZ_AP018256_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018256_2

242561-242667

TypeII

A:N

Consensus_repeat	Method
AGTTGGCGCCAATTTTGGAGTAGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018256_2

>merge|NZ_AP018256|2|242561-242667|CRISPRCasFinder
AGTTGGCGCCAATTTTGGAGTAGATTCAATCGCTACTTCGGTTGTTGGCGCCTCCGTGGGTATAAGTTTGGTAGCTTCGGTAGTTGGCGCCAATTTTGGAGTAGATT

>NZ_AP018256|2|2|242561-242667|CRISPRCasFinder
AGTTGGCGCCAATTTTGGAGTAGATT	CAATCGCTACTTCGGTTGTTGGCGCCTCCGTGGGTATAAGTTTGGTAGCTTCGGT
AGTTGGCGCCAATTTTGGAGTAGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018256.1\|WP_096694910.1\|235913_237362_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsB	unknown	unknown	gnl\|CDD\|274896
NZ_AP018256.1\|WP_096694851.1\|228595_229357_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694858.1\|241687_242041_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694856.1\|237381_238584_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsC	unknown	unknown	gnl\|CDD\|274895
NZ_AP018256.1\|WP_096694864.1\|247062_251286_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273865
NZ_AP018256.1\|WP_096694861.1\|245440_245659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694911.1\|241387_241576_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694867.1\|254015_255041_-\|recombinase-RecB	unknown	unknown	gnl\|CDD\|224552
NZ_AP018256.1\|WP_096694862.1\|245714_246416_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212667
NZ_AP018256.1\|WP_096694860.1\|243088_243796_+\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NZ_AP018256.1\|WP_096694853.1\|232396_232798_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694868.1\|255195_256125_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694912.1\|252296_252806_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225943
NZ_AP018256.1\|WP_096694852.1\|229912_230794_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694857.1\|238745_239474_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274897
NZ_AP018256.1\|WP_096694866.1\|253005_253539_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096729258.1\|251374_251809_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694855.1\|235462_235858_+\|His-Xaa-Ser-system-protein-HxsD	unknown	unknown	gnl\|CDD\|274894
NZ_AP018256.1\|WP_096694863.1\|246366_246552_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018256.1\|WP_096694854.1\|235107_235392_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018256.1\|WP_096694910.1\|235913_237362_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsB	gnl\|CDD\|274896	TIGR03978, paired_radical_SAM_protein_1, His-Xaa-Ser system radical SAM maturase HxsB. This model describes the upstream member, HxsB, of a pair of uncharacterized radical SAM proteins, regularly found in the context of a small protein with four or more repeats of the tripeptide His-Xaa-Ser (HXS). This enzyme appears to be part of a peptide modification system.	0
NZ_AP018256.1\|WP_096694864.1\|247062_251286_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|273865	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain. This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.	4.74288e-21
NZ_AP018256.1\|WP_096694862.1\|245714_246416_-\|Hsp70-family-protein	gnl\|CDD\|212667	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family. HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs.	8.46083e-18
NZ_AP018256.1\|WP_096694912.1\|252296_252806_-\|peptidoglycan-binding-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	1.60747e-22
NZ_AP018256.1\|WP_096694857.1\|238745_239474_+\|hypothetical-protein	gnl\|CDD\|274897	TIGR03979, His_Ser_Rich, His-Xaa-Ser repeat protein HxsA. Members of this protein share two defining regions. One is a histidine/serine-rich cluster, typically H-R-S-H-S-S-H-R-S-H-S-S-H. Members are found always in the context of a pair of radical SAM proteins, HxsB and HxsC, and a fourth protein HxsD. The system is predicted to perform peptide modifications, likely in the His-Xaa-Ser region, to produce some uncharacterized natural product.	2.72987e-07
NZ_AP018256.1\|WP_096694867.1\|254015_255041_-\|recombinase-RecB	gnl\|CDD\|224552	COG1637, COG1637, Predicted nuclease of the RecB family [DNA replication, recombination, and repair].	8.61512e-32
NZ_AP018256.1\|WP_096694855.1\|235462_235858_+\|His-Xaa-Ser-system-protein-HxsD	gnl\|CDD\|274894	TIGR03976, hypothetical_protein, His-Xaa-Ser system protein HxsD. This rare conserved hypothetical protein of small size occurs exclusively, and perhaps universally, in the context of a pair of (uncharacterized) radical SAM proteins, TIGR03977 and TIGR03978. Many members of this family have invariant motifs LYW and LLNDYxLRE, but PSI-BLAST starting from family members well below 20 % pairwise sequence identity to this group eventually brings in the entire family as modeled here. The family TIGR03979 represents the fourth regularly conserved member of this system.	9.65413e-20
NZ_AP018256.1\|WP_096694856.1\|237381_238584_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsC	gnl\|CDD\|274895	TIGR03977, radical_SAM_domain_protein, His-Xaa-Ser system radical SAM maturase HxsC. This model describes the downstream member, HxsC, of a pair of uncharacterized radical SAM proteins, regularly found in the context of a small protein with four or more repeats of the tripeptide His-Xaa-Ser (HXS). This enzyme appears to be part of a peptide modification system.	3.19803e-157
NZ_AP018256.1\|WP_096694860.1\|243088_243796_+\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	2.50214e-21

>NZ_AP018256.1|WP_096694858.1|241687_242041_-|hypothetical-protein
MRFLELFKPKPAHSTIESYGQISSGAEPQQIQSTMEWLFASLMAAGYSGNSHVIWYNDAKPDTGVEKLVKKLIRNSEPVFLYRCGGKVQSPPHGFYWRMMNEHPSMRIYQLELKDSH
>NZ_AP018256.1|WP_096694911.1|241387_241576_-|hypothetical-protein
MTKTIIDQVISINSYVLIVFYTSAHSWQFRVISPLGSIYGERKTYYSAQAAESAGRNWLKQV
>NZ_AP018256.1|WP_096694857.1|238745_239474_+|hypothetical-protein
MKKFLGKLLTVGIAVEALLQTTSTLPVNAEIAEKIAVAQEVANRSDAFDASIEPLVLTKHENTGVIVAGHGSHSSHSSHSSHSSHSSHSSHYSGSGGYSGGGYSGGGYFDSGYTSSPTLTEQQLINSLPKLESLLQKPGISITVVDVKINTKTFNKLGLLINGQSYIPTKLLKFIPTKNSFQNDSILTLYSAQSLGIQMITYKGIIFIETAGLKKLYNDVSVSWDNTQKVVILKTDVALLER
>NZ_AP018256.1|WP_096694856.1|237381_238584_+|His-Xaa-Ser-system-radical-SAM-maturase-HxsC
MLKLHSSIKTKFNKETFITKLTDSTLLPLPLRSFNSLLVDATNLENLNSQATQEFECLVIKNSQNIDFDYSNIHYHNLIILPSELNYLDSGDIIKVSPQSGKISTLYRKNSNYNVIFMTERCNSNCLMCSQPPRNIDDSYLVEDYLKAIPLMSPETLEIGITGGEPTLLKNDFLKIVTACRDYLPSTALHVLSNGKLFSYLQYACSLAQIQHPDLMIGIPLYSDIASIHNYVVQAEDAFDQTIRGILNLERTNVRVEIRVVVHQQTYQRLEQIARFIARNLPFVSHITFMGLEIMGHTRANLEQLWIDPVDYQDKLEEAVCYLNRRGMNVSIYNHQLCVLRKSLWPFAKKSISDWKNEYFPECDACTVKDKCGGFFSSSSLRFSNHINPIVSKYLLPNGI
>NZ_AP018256.1|WP_096694910.1|235913_237362_+|His-Xaa-Ser-system-radical-SAM-maturase-HxsB
MSKFKTIDFYQSKSAYNLLPYRFLSLDSQRYIVTNLAGEYIILSLDELQRFTRKQLTYDDSIYNELKSKHFLYDDESDIALELLAVKYRTKQSYVANFTGLHIFVVTLRCDHSCPYCQVSRQSEDKMSFDMTREIADKGIEILFKSPSSTLKVEFQGGESLLNFELIKYIVEQVETKNITFGKYIKFVIATNLSPLNNEILEYCFHRNIYISTSLDGSEKLHNTNRPKQGNDSYAKSVAGIERVRQKLGQNSVSALMTTTHESLKYPREIIDEYLRLGFKSIFLRSISPYGFAVKTVNSTGYDMNEWLDFYKEALAYIIELNQAGVKFVEEYTALVLKKILTPYPTGYVDLQSPAGIGISVIIFNYNGEVYASDEARMLAEMNDKTFKLGNLLTDSYEQIFTSDILIETIYETMLEGVPRCTDCAFIPYCGSDPVYHHATQNDKVGYKLTSDFCHKNMSIIKHIIKLMETQPDIKTILESWL
>NZ_AP018256.1|WP_096694855.1|235462_235858_+|His-Xaa-Ser-system-protein-HxsD
MLSQDFSTEKFNFVFQGEDYFGVHISTECYSKTIIFKTAHKFTDRCYVHVEPNAENRFLVSFKCKNQKHSVQKLAQEFCNELLEQELRFIIAQETEGVRNLIIAHAFSKTSLIEPDLETADYLEDAHHIGK
>NZ_AP018256.1|WP_096694854.1|235107_235392_+|hypothetical-protein
MENISTNQAVKTTQALKADIVSIEIENPVMLTELIGFIRCKINLKNGQSSQAVANFFLTKEGTLKPKEVSIEEAETLAITKALAYIGYNYEIDI
>NZ_AP018256.1|WP_096694853.1|232396_232798_+|hypothetical-protein
MTSIKIYEQIVVLLAQKTSWEVKLRSSNSDDLAILVAICNNDIASHGYNKSSFAKKIEYTIKFISKSNLECVDVIVMEDKFEHHCTNIIRQCYIQQTSDINVIVEYIIKEVPFRPSEPLPKGVWISKSMKLVN
>NZ_AP018256.1|WP_096694852.1|229912_230794_+|hypothetical-protein
MTINQMLDKIFKNWKGFPNINVLGKYEFLSQTVCANSLEMKHIESLINNPNDIQLKRKIFGVFIHEITHWLDHTSTLWRQKFLIDIFNAFNAKENENIDESWRIQKLFSDLSRMQFADYYTVDGSAAKKPWNKELWNYEFGCGLQFGRDGKISETHPFLFTKFFTSDNEFIKRVPLSVISLLETNAVASELQLEVALLSLLKQEEFFIENKLIEQTYLKRLYNPELTVYSVATHCLANLAKISDATAYFLASALSTLCLNLPSQVFQLLKIPANPGFLTSERKTLGLARFRII
>NZ_AP018256.1|WP_096694851.1|228595_229357_+|hypothetical-protein
MEPCDISLGFWQLSCLYGWDCVPDFNTDALVVKTTSYEFAKYILDNFREVLRAWASRFELSFVVIKYGNSSWDFIDIETKVSKSSILRHKFTSNPFLAAKLSQVHHMQSRNNLIDIYGADYVGILDFLKESRLQGRIVVITSNTTNICYHTNDLLLPSRGILMPYQWVGFDYSALWRNSRGGISQLENLQQILASDRYIEGYDYNLRRPDGAIVEYQTDYYLCRGFLGDEVRIGVSLPEDYRILEEAPEPALN
>NZ_AP018256.1|WP_096694860.1|243088_243796_+|thermonuclease-family-protein
MKNIVKRFAIISCIILGFILVVTTSDLVQAKNNQLQQAVVTKIQDGDTLLAKIGNRIEKIRLSCIDTPEIGQAPFDKQATQRLSQLAPVGQTINVKASPQGRDKSGRLVAEIYQGDTSVNLQLVREGHAVLFCKYLSNCAGSRNSFLSAERAARSEGLGVWNPSNSWKNARESKPCSANTASTTTPPTPMPIRAARQGQGCECPYDLDRRGGSCGGRSSYSRPGGASPVCYTTDR
>NZ_AP018256.1|WP_096694861.1|245440_245659_-|hypothetical-protein
MVETVDGVEVKNAREQIRYFPGDFAAEIEPLRMKDTRIREKYFTHQQIIEYQQTIVCYTCKKPCAGTCRKSK
>NZ_AP018256.1|WP_096694862.1|245714_246416_-|Hsp70-family-protein
MNTTIFTLELFDFYIHNKKNYALSQDIERSQFESIIQTHINDAMRLVDKVLHDARLQTSQINQILLIGGTSRIPLLINEMHKTFGVTKVVQIPNADTVIAEGAAIISYYNWQPYLVQSIGIQLADESFYTVFDSGTILKPDAAQKEVVFFCTDNREGEGRLIITEKLSNQEHKVKEIINVPISKVLQKIYKERVIANFTVDKDVILRISAKGSVKDKPIYTDIHDLCYGLRFA
>NZ_AP018256.1|WP_096694863.1|246366_246552_-|hypothetical-protein
MEVNKFVPGKFDIRDEDETGSILIVADLAPEEEFIENLKYWALETDKYNNLYLRTFRFLYT
>NZ_AP018256.1|WP_096694864.1|247062_251286_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKNQGLVHSLLLCAFLSLGSTSVHAQITPDKTLGTEASKLTPNVLINGASADLINGGAQRGNNLFHSFSEFNIKDGQGVYFANPVGVVNILTRVTGNNASNILGTLGVDGGANLFLINPNGILFGQNARLDIGGSFVGTTANGVQFGNQGNFSATNPEAPGLLTINPSALFFNQINPNAAIVNNSVAPAGIALADFKATGLRVPDGKSLLLVGGNVIMDGGQLNAFGGRVELGGLVSKGNVNMSLNGSDLRLEFPDNVTRATVTLNNTAGAFVTGAGAGGGYLTINASNIDILSGSILSAGIGQSLGAPETIAGDITLSAIGEIKIAGSGSQVRNLVRIDSKGHGGNITINAGSLKLEDGATLEASTYGKGNAGNVTVTASDSISLAGSSYIFSTIEAGGVGKGGDININGATLSLTDGAQLLTITRGADGTQPAGKGSAGNVNVKVSGTVDIAGQKNGFNSGILSNVGIGTEGSAGNITIDTGSLKLRDGANLSASTYGIGNAGNVTITASDSISLAGQPTTIFSTVEAGGVGKGGDININGATLSLTDGAQLLTITRGADGTQPAGKGSAGNVNVKVSGTVDIAGQKNGFYSKISSDVKTETEGNAGNITIDAGSLNLRDGATLEASTYGIGNAGNVTITASDSISLAGQPTTIFSIVEAGGVGKGGDININGTTLSLTDGAQLGTGTRGASDTQRAGRGDAGNVNIRVTGVVEIAGEKDTSKSAIDSRVETGTIGNAGNITIDTGSLKFRSGAGGIAASSFGRGNAGNVTVRAKNDVSLVDGNIFSTVEAGGVGDGGNIDINASSLSLLSGAQLLTFTREASDTQPAGQGNAGNINVRVTGDVDIAGEKNGFSSQITSSTAAGTIGNGGNITINSASFSLRDNAKLSASTRGQGNAGNIDVEVTGAVTLLGTKDTNTSAIFSGVEAGGVGKGGNITIDADSFLLRDKIQLTTSTSGQGNAGNVIVRAKNAVSLVGGSILTTVQAGGVGKGGNIDINAAMFSLTDGAQLQTITFGASNTQGAGQGSAGNVSIKVTNAVEISGFGTAIGSLVETGTQGNGGNITIDANSFYLRNGAKLDARTENNNKGGDITVNTNVFETLTGGQLITTTSNNGRAGKITINATDKILISSNDLNYDNSNAGFFVTSTGAGTTGDIEINSPNIILDNQGKLEANSASGNGGNINLNSNLLLLRRGAQISTNAGTEQVGGDGGNIDIDSRFIVAVPNENSDITANAFTGKGGNVNIRAQGIFGIEPRATESPQTSDITASSDRGVQGEISITEPDVEPEQGLIELPEEVVDATRRVAQICPREPGAKPLGEFTITGRGSLPPSPLEALPGTTNNTKLATLDSSNINVLNIAPSKAQNTIVEAQGWVKNVDGSMELVAMAPVTTANARVVASACPGR
>NZ_AP018256.1|WP_096729258.1|251374_251809_-|hypothetical-protein
MLCGLLTNCGFKNPLVPGDKITAYLAPTFRTDNLLDREVREHDIKFIVVQLASYIITTENEILIIKMKFIESVSSEIEIDRFLFSCQCDVLEVVIVPVELNIQSTNNLLKGDTKFKLEIKALFKYYDFKEKENIIAYIDVIEIE
>NZ_AP018256.1|WP_096694912.1|252296_252806_-|peptidoglycan-binding-protein
MMTSFNATTAQLQKPVLKEGSKGEAVKELQRLLLKYDVYIGTPDACSPVGEEVVDGIFGARTTAAVKTFQARMFLTQDGIVGDRTWRSLFKGAPVDMPTLKKGSKGDLVKRIQERLTVAGYEVGKIDGDFGSSLEKAVRQLQKNTGLPVDGVINDRTWFELSKLNTNFC
>NZ_AP018256.1|WP_096694866.1|253005_253539_-|hypothetical-protein
MKSTFLNAAFTCNVVVGSFLISSLTQAQTSVIHEFKLASTQNTSQIVEDNDIKFQLQGCQRGFKIVNCSILITNLSDKNEILHAGNSYSRENSRVFDSSGKEYVSKQIQLDNRKDRMFARINIIKDVPIKAILSFEIPPNIQSASTIELSYWVNRRLKKHKVNFYNVNFTNSTSSSM
>NZ_AP018256.1|WP_096694867.1|254015_255041_-|recombinase-RecB
MLAGTALRRTSTGYEFSSEYALEEFVWSNLEHLFKLKPVARQHPAKGEFCDILAVHNKQLSILELKNTEDRYIVQQLTRYYDNLLDTKPFTEQIDYNLPVKLIALAPTFHRHNYIDSKYCKLDIDFIQVAVVQKLQDFYLQLINVDTNVTTEIQIPYQEIDINSTCSNVEAPPQLLLNWLGACGKDEQIAILKMREKILSFDARITEEIEGKNTIKYKGKNKPVAEIYYYKTKSKPIIFLWLPTPSSCLLDRKQLMGRIRLWTDGDKVTDVGHVTEGMGKMRLESEWQSMAPGKRPGNYYHQKYSPFHAGVYNNIWQKNDWDTISLELLVNLALEKWLTRI
>NZ_AP018256.1|WP_096694868.1|255195_256125_+|hypothetical-protein
MEVALDENTPAEVLRELALKEKSAMLLSLYDAYPYSETMPPQYEKSKSILRSVAKNPNTLPDILKELFDFECCPIEVLNNIALSLILLENPSFLEEIYNAYPDSYKVFGMDDAPLFFQEWGVYNENISIRQRAALKIKSAFLLEVCAKDDNPRVRTYVAINEYTPGYILEKLAFDEHKEVREATAKNFNTPKNALSLLAQDKYVDVRIGVASNINTPEAILKMLAKSKPKRIRETIAANPNVSIKILEILLKDKSGSVLTKMAYNKKTPIHIIRALANKNNYSFHTNLMINSQTPRDILESLTSDEYDS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_AP018256_1	1.1\|108414\|36\|NZ_AP018256\|CRISPRCasFinder	108414-108449	36	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	108414-108449	1.0
NZ_AP018256_1	1.2\|108486\|36\|NZ_AP018256\|CRISPRCasFinder	108486-108521	36	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	108486-108521	1.0
NZ_AP018256_1	1.3\|108415\|46\|NZ_AP018256\|CRT	108415-108460	46	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	108415-108460	1.0
NZ_AP018256_1	1.4\|108487\|46\|NZ_AP018256\|CRT	108487-108532	46	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	108487-108532	1.0
NZ_AP018256_1	1.5\|108559\|42\|NZ_AP018256\|CRT	108559-108600	42	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	108559-108600	1.0
NZ_AP018256_2	2.1\|242587\|55\|NZ_AP018256\|CRISPRCasFinder	242587-242641	55	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	242587-242641	1.0

1. spacer 1.1|108414|36|NZ_AP018256|CRISPRCasFinder matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

tataattctgggcgaagtatacttcctttctgagac	CRISPR spacer
tataattctgggcgaagtatacttcctttctgagac	Protospacer
************************************

2. spacer 1.2|108486|36|NZ_AP018256|CRISPRCasFinder matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

actgaaaaatcatagtcccgtttccagcacttcaag	CRISPR spacer
actgaaaaatcatagtcccgtttccagcacttcaag	Protospacer
************************************

3. spacer 1.3|108415|46|NZ_AP018256|CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ataattctgggcgaagtatacttcctttctgagactttcaacccac	CRISPR spacer
ataattctgggcgaagtatacttcctttctgagactttcaacccac	Protospacer
**********************************************

4. spacer 1.4|108487|46|NZ_AP018256|CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctgaaaaatcatagtcccgtttccagcacttcaagctttcaaccca	CRISPR spacer
ctgaaaaatcatagtcccgtttccagcacttcaagctttcaaccca	Protospacer
**********************************************

5. spacer 1.5|108559|42|NZ_AP018256|CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

atgacaggttaaggttagacccgcctgaccaagaactttcaa	CRISPR spacer
atgacaggttaaggttagacccgcctgaccaagaactttcaa	Protospacer
******************************************

6. spacer 2.1|242587|55|NZ_AP018256|CRISPRCasFinder matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

caatcgctacttcggttgttggcgcctccgtgggtataagtttggtagcttcggt	CRISPR spacer
caatcgctacttcggttgttggcgcctccgtgggtataagtttggtagcttcggt	Protospacer
*******************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_AP018257

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP018257_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018257_1

137285-137382

Orphan

A:N

Consensus_repeat	Method
GGCTACACCAAAAGGTATAGAAAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018257_1

>merge|NZ_AP018257|1|137285-137382|CRISPRCasFinder
GGCTACACCAAAAGGTATAGAAAAACGTATTAATCACATTTAACTGGTTGCCATCTAGGGTTGCTTCAACGAGGCTACACCAATAGGTATAGAAAAAC

>NZ_AP018257|1|1|137285-137382|CRISPRCasFinder
GGCTACACCAAAAGGTATAGAAAAAC	GTATTAATCACATTTAACTGGTTGCCATCTAGGGTTGCTTCAACGA
GGCTACACCAATAGGTATAGAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018257.1\|WP_096695227.1\|135423_136686_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237178
NZ_AP018257.1\|WP_096695158.1\|145512_145773_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695157.1\|145076_145319_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695140.1\|126071_126920_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695152.1\|140644_141034_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379352
NZ_AP018257.1\|WP_096695144.1\|132534_133533_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695151.1\|140120_140429_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695141.1\|127000_127210_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368641
NZ_AP018257.1\|WP_096695142.1\|128881_130834_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225885
NZ_AP018257.1\|WP_096695153.1\|141304_142084_+\|ribonuclease-HI-family-protein	unknown	unknown	gnl\|CDD\|260011
NZ_AP018257.1\|WP_096695156.1\|144389_144743_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695143.1\|130963_132397_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226196
NZ_AP018257.1\|WP_096695149.1\|137556_138054_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|224442
NZ_AP018257.1\|WP_096695146.1\|134373_134718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695147.1\|134751_134994_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_AP018257.1\|WP_096695154.1\|142527_143418_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226875
NZ_AP018257.1\|WP_096695145.1\|133923_134205_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695148.1\|136841_137057_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695150.1\|138878_139223_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695155.1\|143753_144206_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|135173

Protein	Function_ID	Function_description	E-value
NZ_AP018257.1\|WP_096695227.1\|135423_136686_+\|hypothetical-protein	gnl\|CDD\|237178	PRK12705, PRK12705, hypothetical protein; Provisional.	0.000776305
NZ_AP018257.1\|WP_096695149.1\|137556_138054_-\|thermonuclease-family-protein	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	4.35234e-33
NZ_AP018257.1\|WP_096695155.1\|143753_144206_-\|hypothetical-protein	gnl\|CDD\|135173	PRK04654, PRK04654, sec-independent translocase; Provisional.	0.001352
NZ_AP018257.1\|WP_096695147.1\|134751_134994_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.36766e-09
NZ_AP018257.1\|WP_096695154.1\|142527_143418_+\|hypothetical-protein	gnl\|CDD\|226875	COG4469, CoiA, Competence protein CoiA-like family, contains a predicted nuclease domain [General function prediction only].	7.52193e-06
NZ_AP018257.1\|WP_096695152.1\|140644_141034_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379352	pfam13730, HTH_36, Helix-turn-helix domain.	5.17125e-07
NZ_AP018257.1\|WP_096695141.1\|127000_127210_-\|hypothetical-protein	gnl\|CDD\|368641	pfam05860, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	1.97957e-07
NZ_AP018257.1\|WP_096695142.1\|128881_130834_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|225885	COG3349, COG3349, Uncharacterized conserved protein [Function unknown].	8.30461e-60
NZ_AP018257.1\|WP_096695153.1\|141304_142084_+\|ribonuclease-HI-family-protein	gnl\|CDD\|260011	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Most archaeal genomes contain only type 2 RNase H (RNase HII); however, a few contain RNase HI as well. Although archaeal RNase HI sequences conserve the DEDD active-site motif, they lack other common features important for catalytic function, such as the basic protrusion region. Archaeal RNase HI homologs are more closely related to retroviral RNase HI than bacterial and eukaryotic type I RNase H in enzymatic properties.	6.76578e-44
NZ_AP018257.1\|WP_096695143.1\|130963_132397_+\|hypothetical-protein	gnl\|CDD\|226196	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	5.30148e-171

>NZ_AP018257.1|WP_096695148.1|136841_137057_+|hypothetical-protein
MKFLREQYPKPDRSKQTIITKEEWEQIVLEQKKYIQECMQNHSKFGMFESLFNISLYRSRIMNWFNNYCIN
>NZ_AP018257.1|WP_096695227.1|135423_136686_+|hypothetical-protein
MQCLATCPDGKKVFSEWLATDFGASRYVAESAMKLSAWFEKLPVRLQCLLRERVQHWKISALILLTRVTEDVLEEIITTGKKTAAQVKKFIAKKAKKATSDKVSNSSKLISQLPVVDSESQIELAPVELPEVSSTQELAPVTQELGLGVRIIVQNESTGWNGACGVITDIGNNDDFWVLLDHAIAQGRPAKSLLKSHQLRLERPNSARILTTADIELFKAEAIKQYKIENAETEQARFAEIKGAAEKKAKQANASFQKHAQNMTEKVAKLVEQLEASEKEIARLQSLNVENQRLQQRVTELENALVGASKDSWGNTFNAQAAKVLNSNIEKTVPQLISKIERLEKDLQEKDAVIVQLQQNWAPDSDAVIASFGEVGESLGWNGWRRSGYRDSNGTLHKGMSAINAFVSDLTREFQQEAVF
>NZ_AP018257.1|WP_096695147.1|134751_134994_-|helix-turn-helix-transcriptional-regulator
MRVTFSKEFPGLGKRIKHYRVLSNKSLTELAATAGISVPHWNRIENEKIQELPIATLRGIEKALGVDLEVRFDTETTNEA
>NZ_AP018257.1|WP_096695146.1|134373_134718_-|hypothetical-protein
MSNADQPQNITARLDDVDARLEQLGNEIDLIRTIQDSVRRETRANSQTGARLERTVTQLADIACDHQRALQLGSQNAERDREVVNNDREVFQAEIRRIWEYLLRQGGNGNAPAN
>NZ_AP018257.1|WP_096695145.1|133923_134205_+|hypothetical-protein
MTFTHRDYFNEVVAGIKSFEKELRIFCLKASLDTIKIRLTQRGTQIDGAGSEWIRKRIVECSDAYIDNYFGEPIDTEYCSAQDVAANIVSRLH
>NZ_AP018257.1|WP_096695144.1|132534_133533_-|hypothetical-protein
MSNSLIEQAADINTHPDILRDLALKSIELVRVVVKNPSAPPDVLDALSGYEHDPEIQRNVTANPNTPVEVLITLGADFPSELINNPVFPLLLLENPRLFQELPFEVIESILLLDDVPLYYLVMAASRDNSKILNIIANHPLAPFHALSQIASNPTRLEEAYIAAQHVNYTSEITLGWDEEIWRLAVANNPNASAETLHKLAFHPNHDVLIAVTKHENTTVETLLTLSRKRKKGYSNIRAHAMKALIQKDLKKAGTVLAEFVSTDEPTSPRFILLLHPIAPPEFLAKHANSICWIERYAVAQNPSTPAHVLTRLTTDANRLVRAVALERLQTL
>NZ_AP018257.1|WP_096695143.1|130963_132397_+|hypothetical-protein
MTTTEQLVKKSWAEAIKETAVEFGLTSLPIISGAIPSKLRGSFYCNGSARLERGGETVKHWFDGDGAVLRIHLNSAGATGIYRYVKTAEYLEEEQSGKLSFMGYGTMPSGSIWRRFFKPIKNVANTSVLALPDKLLALWEGGHPYALDLETLNTIGLDNLEWLTNNLSYSAHPKQDPLTKEIYNFGLSYGKKTFLNVYRCDFKGKIIAKTAIPLEGAPLVHDFVVAGQYLVFLIPPIRLQIFPLLMRLKSLSDNLSWQPKRGTQILVVDRENLNLLSRGVTEPWYQWHFGNGYVDLDGSVLFDFVQYSDFKINQYLKEAATGYTKTPAKGTLHQIRLNPKTSKVKEIACVFDRCCDFPSVNPNKIGQPWRHTYLSVLSKEEDIGQEIIGGTFACVDYKTNTYKLASLGEGNYGTGPIYAPDPNNADQGWILTVVYNSNSNQSEFWIFDAQDLSAGAICRLALPKVIPIAFHSTWNAA
>NZ_AP018257.1|WP_096695142.1|128881_130834_+|FAD-dependent-oxidoreductase
MNNLFDSSSSQISRRVALKLLSIGAIGTTLGYSRLNKPQPIAFQQDILNLPTHLSNKKTVVVVGGGLAGLACAYELSKRGFAVTLLERSPNLGGKIASWKVQVGSEEFMMEHGFHGFFPQYYNLRSLIDEINISNNFRSLERYSVVFRNNEYNPEVFHPNNSAFPWNIVDLAITSSNRWRWGINLTKYKHLQVFYAITSFQIPRTYQDFDNLTVAEWVKKDFPQGLYDLYFLPFAKSSLNAPDKFSVAELLHFFHFYFFGNPEGLAFDGTRQDMGTSLVQPITQMIERNGGKIVKEATVSNINFKQGNIASLSYQQGQTQTAVPFWVKHNSAIDSEDLEYYGAGDAMFAVSPNSEYAISMSCTHQGCTVERQENGAFHCPCHGAMYDELGRVMSGPIKRDLPRFLVTERKEENIQLVADISTLSVTEQTVEADYYVLATDVPGVKNLFGLMTGEVNQELKNQVDKLTVSDPFAVARFWFDRDFEWEHSNFASLSGYKLTDSITLYHRIQEQFIEWSKRTGGSVIELHAYCYKEKEFPTQKSLLTTFEQELYEIVPQLQEASMLHRELVNQKNFSGYPPNSFTHRPETSTPVSNLLFAGDWVRMPFPCGLMERAVSSGILAANTILYQEKLQRRTLLSVNPEGIFNITPIV
>NZ_AP018257.1|WP_096695141.1|127000_127210_-|hypothetical-protein
MINITGGQQSATNIFHSFTEFSIPINTTVRFLVSPDVITNIFSRVTGANVFLRVVPGIPDARFKYDIRH
>NZ_AP018257.1|WP_096695140.1|126071_126920_+|hypothetical-protein
MSRPKGWYKQLTIRPVLPVDGYQSYEKICGHVADIYFPIIDEDKIRRLVKENATDSRYISAYTLFQVGKSKCPAYWVNEDLLTALMKSKMSVEIENLNWAMRTGIFMLPKGAILSPENHSIEAIYWHCDIENDLLYWTAVDKVSSFCRRFRITNNANKFTYSDVEDMDSETVVEFNTYLQSIFLRLLLIMEARPEYIDTQSARVVVNKGFSKKNDKDYYEPLWIGKSYRLKREGKEVTGSGTGGSKSPHWRQGFLRNQAYGEGYKERKLVWIEPVFVVGGGE
>NZ_AP018257.1|WP_096695149.1|137556_138054_-|thermonuclease-family-protein
MNKLFPIALSLIVASSGAVSAQNVPAQVVSVGDGDTIRIVLNGKTETIRMACMDAPERKQGQYGAASTNRLKQLLPRGASVQVRQIERDRYKRLVAEVFVSNKSINLQMVKEGQAVVYRQYLSACGATQDQYIKAEAEAKRKRLGFWNQENPIRPWDFRRNARKN
>NZ_AP018257.1|WP_096695150.1|138878_139223_-|hypothetical-protein
MKKIICALLALPLTLASIPTQASEIHLNNDSFDRPIQREIILAQRYYRRTQVKRLIIIAPRRNRVRRVRLYRVTPVYRPVRLYRVTPVYRPVRLYRVTPIRRYNRYGNQRVYVR
>NZ_AP018257.1|WP_096695151.1|140120_140429_-|hypothetical-protein
MFRWLSTIIARIRVANTSARACQSSQVNIYTSSTIDSFVQPPIDTYSSAPVDTCTSSSTDTYSPAPLETYTPAPVETYCPPLMDVCTPPPMDICTPPSMDSW
>NZ_AP018257.1|WP_096695152.1|140644_141034_-|helix-turn-helix-domain-containing-protein
MPKNVRSLNPSSKTKWKAPPDDKPAIFVRGELDDYGLNLYEFRVLAHVARRESKESGCYESQAKMATACGMSQRMVLKVLQVLCEAGILSKEKADGKRTNSYRVNKGSKWMHPSCLESIRSKKSVLDSE
>NZ_AP018257.1|WP_096695153.1|141304_142084_+|ribonuclease-HI-family-protein
METLTDWTSIYFDGAAEPTNPGTAAGAAILDLPNGESITVTVDIGVQTNNAAEYSGAIAGLEKALELGCRRIKLFGDSQLVIYQLIGKYRCHSDNLKPFCSRGQELLKEFDEYEAEWIPRAQNSRADAAAGEVLRAKLPPSLAVEVPCNLPVMKPRIGLQKRIEDLQLKGKKASFKEWLSLKSGRDEFSLLKGVALEQRVPDVVKDAIIEALRPTEKEDEKFIATVYRWYLRGLPANLTLHKCRIDAEFTANMRLNSEK
>NZ_AP018257.1|WP_096695154.1|142527_143418_+|hypothetical-protein
MAETPTGELIKASDAHKGGSYACPACKQSFVLRRGKRKRPHFAHKALSPNCTPETALHHSFKTLMHEKIQKHIEQSLPLKIQWDCSNCGEIHTGNLLKKAVKVQLEANLEICRPDIALLDKDGSTIAVIEVVVTHAPEETTLEYYQQNRIAIVIYSLDSDEDIKRLDDEVLKPDNVSLCTNPKCLKCGNKMTKKYLEIIDASCWKCHAPMKVAALSSRLWYLGISDFSDSDIQLANQKGCFLKSQYSNVEKERYIANTCRKCNRFIGNHYLFRDYVSFIELEREELDAGYYCHHCQ
>NZ_AP018257.1|WP_096695155.1|143753_144206_-|hypothetical-protein
MAPEQKDNLYKCIIFGFELEVVDINSYWKFWLMFRWLSTLLARFRVTNTSARVRHSSPVNIYTSSTLDSFVQPPIDTYSSAPADSYTPTPAETYCPPLMDSHTPAPVETYCPAPTDSYTPAPVETYCPPPTETYCPAPVEICTPPSMDSW
>NZ_AP018257.1|WP_096695156.1|144389_144743_-|hypothetical-protein
MSNFEHCRLEAIKRALELVSKWGDINCLINNAHRFCNARKEDFEAIRELRKEGASDECLKETMRIAGANYGATNLLSAFYFINGNYIQSDIWYARHIHSMNRILNRKDELNDMEDAF
>NZ_AP018257.1|WP_096695157.1|145076_145319_-|hypothetical-protein
MALDAQIAFRTSSEVKAMLEDIAASQNKRFSQLLNEIIVDYAKRHKGKDVSSMEAILHKLEEHEQLIAQLQQAQLEMVKK
>NZ_AP018257.1|WP_096695158.1|145512_145773_+|hypothetical-protein
MTQILVEHQVVVPEIQVLDDYEIDGVEDRDFGALYRLWKGWNLLGTFYRDLEGKWIAQPSLSTSEQRFDTAEEAQQEIISKSGLLI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP018257_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018257_2

155031-155161

Orphan

A:N

Consensus_repeat	Method
ATACAGCGGTACTTATCCTAACTGCGTGGCGCCTCCTCCACCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018257_2

>merge|NZ_AP018257|2|155031-155161|CRISPRCasFinder
ATACAGCGGTACTTATCCTAACTGCGTGGCGCCTCCTCCACCACCACCTCCACCACCACCACCCCCACCACCACAATGTCCCGTAGGATACAGCGGTACTTATCCTAACTGCGTGGCGCCTCCTCCTCCAC

>NZ_AP018257|2|2|155031-155161|CRISPRCasFinder
ATACAGCGGTACTTATCCTAACTGCGTGGCGCCTCCTCCACCAC	CACCTCCACCACCACCACCCCCACCACCACAATGTCCCGTAGG
ATACAGCGGTACTTATCCTAACTGCGTGGCGCCTCCTCCTCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018257.1\|WP_096695166.1\|155389_156043_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695162.1\|150843_151176_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695159.1\|145843_146653_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695163.1\|151361_152057_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695168.1\|158614_158929_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695174.1\|169365_169686_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018257.1\|WP_096695167.1\|156105_156327_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
NZ_AP018257.1\|WP_096695161.1\|148502_150467_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_AP018257.1\|WP_096695160.1\|146976_147987_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695172.1\|167199_167607_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695170.1\|161799_165600_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018257.1\|WP_096695171.1\|165619_167164_+\|CHASE2-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018257.1\|WP_096729270.1\|169790_170471_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695164.1\|152273_152828_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|224442
NZ_AP018257.1\|WP_096695169.1\|160001_161060_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695157.1\|145076_145319_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695165.1\|152799_153399_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695228.1\|153513_154134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695158.1\|145512_145773_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695173.1\|168009_168942_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018257.1\|WP_096695170.1\|161799_165600_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	2.87878e-62
NZ_AP018257.1\|WP_096695171.1\|165619_167164_+\|CHASE2-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	2.46901e-05
NZ_AP018257.1\|WP_096695164.1\|152273_152828_-\|thermonuclease-family-protein	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	3.12846e-25
NZ_AP018257.1\|WP_096695174.1\|169365_169686_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.29531e-32
NZ_AP018257.1\|WP_096695167.1\|156105_156327_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	2.08781e-15
NZ_AP018257.1\|WP_096695161.1\|148502_150467_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.59696e-56

>NZ_AP018257.1|WP_096695228.1|153513_154134_+|hypothetical-protein
MCSLGIVSTIASSLAPAAAIPYQGDTVYKSTDRGIPVVVFSASPGSRIRVNLGNSASTTARVAGACGELRISVPASGSFAGLKVDGTAVDASTLPTQTLPSCVNGAFAESRTANFKTPAGQVVIVGKTANTAVSIELPQPTVANVSVNACGFGVLRQRTGQTLPATFSTDSTSYTMTALKNASAPPLCRTAGGQAAAYIPSSWTTP
>NZ_AP018257.1|WP_096695165.1|152799_153399_-|hypothetical-protein
MNFFKTSLFFTITAITSLSTLINPVFASTLVSFSSSIRYGNAGANENLELSTLNARDVNLLSKDLNLKLSIGTEGSAVKFTNLTIGNSYVFDWTLATQETRGEDIFYLFDGTSLTALGTSRIATQNVGGGWRVAPKVQTTEFRVQSSNVMLILLDTRDKSFTSIVKINKLRRVPEGSAVLGILSLVVIGIYRVKKGTRI
>NZ_AP018257.1|WP_096695164.1|152273_152828_-|thermonuclease-family-protein
MVLKKVLEFSPLLIIGALLYLSFSKNSVNGQSAPIPNNPNLWTVVSVSDGDSLKVKTESGEIKKIRLGCIDAPETAQPQGTESKANLERLVSEADNKVIGYPIETDKYGRTVAEVFTSKGDKERFLNEEQVSSGNAYIYRQYLGKCSNRGALEKAEEIAKSQRNGVWSRNDLVKPWDFRKSKSR
>NZ_AP018257.1|WP_096695163.1|151361_152057_-|hypothetical-protein
MTYDYEEVTYLEWQYLKQQAAFERNKFEIERCYGVDYDTYLAIKKQKKTPIDYENFPARPTKFKGQYFRSKLEATWAAFFEQVMEGWEYEPSDALDHFLGWRPDFQIWIHNEPIYCEVKPLWLGTLPDWLKTKICDAESARIGQRNNSVKVAILGNAVPIGIEGRPSLGYISLKRQNNDRDWLPFTVVNAFVVNEKWLSALSTVNPKQGLTHINDCLTSLFTPPVEDFFSE
>NZ_AP018257.1|WP_096695162.1|150843_151176_+|hypothetical-protein
MTIRYFKESIKIKNHCTGRFKELLEKCFIYIKNEPEHPEWGLLGAIFYPDSIEYELHTYEAALKKLNKELDIWLSFVRARDVLEGRRRRALTKNNLEDKIIYLELQRIIS
>NZ_AP018257.1|WP_096695161.1|148502_150467_+|serine/threonine-protein-kinase
MLIGLTLRDRYKIISLLGQGHFGETYLAEDLGVPINPKPKRVVKRLKTQNFIDAQLDWVKNAFEQEAATLYKLSQLHPQIPNLLEYFQVKEEFYLVQDFIDGVDLTKIIIPGTKLAELEVIQLLCEILEVLVVVHQQNIIHRDISPKNIMRRQADNKIVLIDFGTVKQIMLKTSVQTSLTIGVGTPGFMPLEQFNGKPKLASDIYAVGMVGIQALTGIQPHLLDDDEDGEVIWRPRVSITNDFAQVLEKMVSRRVSQRYQNATEALEAMQLLNQQLNKPIAPTIILPPSPLANNTQPYNSTLLNKTKSAEIYNNEGIKKFKAGNYVRAIEDYNQAIIINPNYAVAYFNQGNAYILLGDYQAAIQDLNQAIKINPNDTKFYNSRGFAYNRLGNYQAAIQDLNQAIKINPNYAEAYANRGFAYNSLGDCQVGIQDYNQVIKINSNLEHIEYIYLNRGLAYIKLGDYQSAIQDYTQALKINHNFADAYTNRGDVYSNLGDYQAAIQDYTQALKINPNYVGAYNSRGIAHYNLGDYQTAIQDYNQALKINPNYSNVYNNRGLAHCNLGGYQAAIKDYNQALKINPNYSDAYNNRGVAHYYSGDYQVAMEDFSQAANLYKQQGKESEYQDLLNRIKKLKLTSRTPGATLGSYLSKFLPW
>NZ_AP018257.1|WP_096695160.1|146976_147987_+|hypothetical-protein
MTRLLLPGRHLLYSTELAAVIGRNEAICLQQIHYWMGVQGGKAVDGVKWFWKTYEQWSIELNLSVSTVRRVIANLKNLNLIRVDRLSATTYYQANWYTLNHEALEALIKNEHIEAPTVNTSRCSEKADDNKESSSKEVTLQQHPAAELQKLVQEEENNQEVKEPLDSYKVTESNQDAANEQNLHEGNNSGAPGHDKTTDDIEKMTTEELRNVTIELREMPCTPAFKINPQVLATIKKHPHNVPGAIAYLKEALRSWTRVDCPEAVFSKACKEGLKPANWGKPVVEHPQPSDEQMAELKRSLSKREIRDLSKAPSGLWFVDTGTSILSWWDYLQVQV
>NZ_AP018257.1|WP_096695159.1|145843_146653_+|hypothetical-protein
MNSDGHELELSSARSESSFYTRCQDGVSGMNVTALSQFCGVDQPVMTELLNKLRDSSTLGNNLPASLKPFAGIEQRIIGNQGEKSLYVKDELCHAILEYYALDARKYKGKQIARDNYRMVAKAGLRVFIWSQTGYMPPSAGALTQQQLDLIELIPKLQETINQLQTQIQNLLPPTKNNTMPPGWDIEVWNSQPPQDKRHFRFLYRRRRFRPSDQGTTEPVVEKIITSEEIKARANQEIHKAIGSVTEEEKERLEAAKKKALLEFEDFEP
>NZ_AP018257.1|WP_096695158.1|145512_145773_+|hypothetical-protein
MTQILVEHQVVVPEIQVLDDYEIDGVEDRDFGALYRLWKGWNLLGTFYRDLEGKWIAQPSLSTSEQRFDTAEEAQQEIISKSGLLI
>NZ_AP018257.1|WP_096695157.1|145076_145319_-|hypothetical-protein
MALDAQIAFRTSSEVKAMLEDIAASQNKRFSQLLNEIIVDYAKRHKGKDVSSMEAILHKLEEHEQLIAQLQQAQLEMVKK
>NZ_AP018257.1|WP_096695166.1|155389_156043_+|hypothetical-protein
MFQLSNLVRKSLLAFILVSGLINNSEAFAVPYQGNNVYKSFDNQGHQIIILSGNSNTQWLIRYLSQDKPTTFYVSACGLIRINNRNNRIRRLSINNTEINISTLPVQAVPKCDREISPFAVNNTSSFVTHDGVIYIANAGSSFMPVQGEVQHLIERRITPNLCGFAVFRAPFNRKDFPKSFEWNGNTYQVDSLLTAPQAPRCIRRNSSITTQIPHDY
>NZ_AP018257.1|WP_096695167.1|156105_156327_-|helix-turn-helix-transcriptional-regulator
MPIVGIYVKLKEIREARGFSQEGLARAVGVSLNTMQRWEYNLIRSASFDTLEKLCEVLECKVEDLLEWRRTNS
>NZ_AP018257.1|WP_096695168.1|158614_158929_-|hypothetical-protein
MLKKLISTTAIFSIFAATTISFSTKPAQARIPLVYVKSNRCIGYNNAGRAVSTIRKGFYQITGGGVTNLGNRFNRILVMANGRTGTLNVSTTCLNNNGKNVISY
>NZ_AP018257.1|WP_096695169.1|160001_161060_-|hypothetical-protein
MTSARRNPQPKIPSDLLIGIIIALAVTVIPSIVRHSLDKHLYESGIESYKMANCNAAVEQFNQIISAFRLTDSGNYASRAEEKKAECRFFEDGVKLQKEGKYESALLSYSKVAVYNDSALLAPTREKLSELFQKAKVESLATENVCNRIGILNSSNLLPKQNSNLPLLYPTCGKIYEANKRYEQAISIYNQFLHSFPDHPLKLDIQRSLARTTVADIKGRGARKTKPLLRTGTTVDGSTVVDIQNTSPAKMEITFSGTTPKFGEIEICTDCIEYISKGPEICPGKGPIERYTLEPGKYDIAVKFTTRSGNLAYPWTATWSLEQGGEYKTCFVIVQDLVDESNKKEKEEQNSL
>NZ_AP018257.1|WP_096695170.1|161799_165600_+|tetratricopeptide-repeat-protein
MSRLVKKRHKLKVFTCLTICVFVCVVKITQVSTVRAEDNSVIAQQGERSDGGARAEAERLLNEGVKLYQQRTAESLQQAIRKLEEALKLYRQIDDKGEQAHALLGIGRVYDNLGEKQKALEYYNQALPLLRAVGNRGGEAATLNNIGLVYSATGENQKALEYLNQALFLSRAVSDRGGEAATLNNIGDVYSALGEKQKALEYFNQALPLVRAVSDRGGEATTLNGIGLVYSNLGEKQLSLKYYNQALPLVRAVGDKGGEATTLNNIGGFYSDLGEKQLSLEYYNQALPLYRAVGDKGGEATALNNIGAVYNNLGEKQKALEYYNQALPLRRAVGNRGGEANTLNNIGRVYFDLGEKQKALEYYNQALPLVRAVSDRGREAGILNNIGYVYFDLGEKQKALENYNQALPLSRAVSDRGGEAGILNNIGLVYSALVEKQKALEYYNQALPLSRAVSDRGGEAGILNNVGSVYDGLGEKQKALEYYNQALPLLRAVGNRSGEAGILNNIGSVYDDLGEKQKALEYYNQALPLRRAVADKSGEATTLNGIGLVYSVLGEKQKALEYYNQALPLLRAVENRGGEATTLSNIGQVYDALGEKQKALEYYNQALPLRRAVADRGGEAATLNNIGTVYSDLGENQKALEYLSQALPLHRAVGNRGGEGTTLNNMGNVYSDLREKQKALEYYNQALLLSRAVADRGGEANTLLNLAYTEGDKSNLQESLKQIQSAIQIIEDLRKTYTNKDLQSTYFATVQFYYQFYIDLLMQLDKKYPNKGYDALAFNISERARARSLVELLTEANANIRKGVDPKLLSSEQLILGKIEALQKEMQAPSTSNDKARLEKLKQENDNLLNQYHELIDKIRTNSPQYAAIQYPQPLELKQIQQQLDKDTLLLQYSLGKDRSYLWAVTPDSFHTYELPKLQQIEDAAKKFSEVLTSGATPFGKANPDSINKAAYQLSQQILAPVADKLGKKRLAIVADGALQSIPIAALADPTSNTTYQPLIVNHEIVNLPSVTAIATQRQRPNNKTAPKTLAVLADPVFEANDSRLTGKEPSLAPELNLDRSSLQRALKNLNRNGMPRLKGTRAEAEQILKLVSTQETIYAYDFDANYSFVTNPELKKYRFLLFATHGIVDTTNPELSGIVLSQIDKQGKPVEKGYLRLGDIFNLDLGAELVVLSACDTGLGKDVKGEGLVGLTRGLMYAGTKRAVVSLWQVSDEGTSKLMPVFYKAVLQGKAPTVALREAQLQLWQSKEWQSPYYWAPFTLQGDWK
>NZ_AP018257.1|WP_096695171.1|165619_167164_+|CHASE2-domain-containing-protein
MAPSYLFNLKVQKVEQICLFELSWGQGQRLTTQVEYPVALTQLYQDWRRAYMNFYQSQPLSQPLRGRCIDGGVAIAPNNWQALLFKAEANLMYEFNHWLQSAELYKIRSTIAAAKVSDKIETVKISLIQIFLTCAPIELDRFPWEAWELGAEFGAQEIQIIRAPLNVGTPQTLQKQVNWRPRILAVLGDDSGLNFQGERNALKSLFRVADVQFVSWQPQQTSLQVVEQITNAIADSSWDILFFAGHSDESEITGGEISVAPGVSVAISQIAQKLSAAIERGLSVAIFNSCSGLNIANTLIDLGLSQVIIMREPIHNSVAIEYMVKFLQGLAKHLDIYESMLEARRYLHTEKNFAYPSSYLVPSLFCHPGATLFRIPPSKSWQQRLRYYLPSPVEAIVIVSTLTLSILTPVQELLLDGRLYVQAAYRNVTKQIPTQTAPVALVQIDTESITKGKLSDSELLPMNRKYIASLIERAHNLNTNVIGLDFVIDTPQKNIPEADKKLSITVQRAVHQKI
>NZ_AP018257.1|WP_096695172.1|167199_167607_+|hypothetical-protein
MCPPRPKRKKASRGDICLIAPAALTETYKVWHDRPLFLWKYSGANQDADLIVTEYDDSNKIVWKKSVNLIAQKLLYGAEKTLEADKLYQWQLVSNSKQISSSIAFQIMSTSERNQIETDLLALERNLKASQAPSE
>NZ_AP018257.1|WP_096695173.1|168009_168942_+|hypothetical-protein
MSRVNKKQHKLRVFTYLALSVFVCVIMLSQVSTVQASNYSSILKLDESLYGNARAVAPQSQRSSSKPVASTKIGLASNGIIGNWTAVVRFENGQIFSLERIQIMKTDGGLFGFVYNGTEANALVKGTYGGNNFSLQVEYYFTNSPTRIPPQLQFDGQINGNSAAGTVLYRDSYQKIFKGTFTFARYGYKVTSPIPDNLGGSGVSVINGAWQGEFIPYNSVIGGKGATLTLNLRQEGANIVGTGTLNNNVIPGVRGVVTGSAFTLVLGDYSNGRIEIKGQVSSDAIIGDAIVYAGGQQEIHTFGKVRFTKL
>NZ_AP018257.1|WP_096695174.1|169365_169686_+|CHAT-domain-containing-protein
MTSLTSDLGAELVVLSACDSGLGKEVKGESKDGLTRGLMYAGSKRAVVSLWQVSDEGISMSIFYKAVLQGKVPTVALRKAQLQLWNSKEWQSPYYWAPFTLQSDWK
>NZ_AP018257.1|WP_096729270.1|169790_170471_-|hypothetical-protein
MFLAANIINVIYIASELMSDNKREYDVVLGGQSPAPSHAAVLGGIEGVKRRLSHQAIEHRIPALSDALNYGKEGLKLVLRALDDSEEKVHKYAYNLSKNREEPDVKAALEKYIQHSSFIRFDGFYYNHIQTRPQFLRFYQDGLVLAVIISDYESNLPELVAKWLNKEHISHHGRWTYRIESNTIGFLRNSDNPYCKGEIGKYGETIFLDWGYATFKYYFIHMPNIL

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Crispr_ID: NZ_AP018257_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018257_3

180982-181701

Orphan

A:N

Consensus_repeat	Method
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CRISPRCasFinder
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAACN	CRT
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	PILER-CR

9 spacers

The CRISPR arrays of NZ_AP018257_3

>merge|NZ_AP018257|3|180982-181701|CRISPRCasFinder,CRT,PILER-CR
GTCACATTCTTTACTTATCCCTCACGGGGACGGAAACGACATCAGAAGCCGCATTTCTTGCGTCTTCGAGGTTGTCTTTGTCACATTCTTTACTTACCCCTCACGGGGACGGAAACCTCACAAACTGCTCTAGACAAATCACAACCAAGCAGTCACATTCTTTACTTACCCCTCACGGGGACGGAAACGAAAGATGCCACGCTATCAAACCACAAATATAGAGTGAGGTCACATTCTTTACTTACCCCTCACGGGGACGGAAACGGCCAGCAGCAATCGAACAGGCGGGTAGTTCCCGATCCAGCCCGTCACATTCTTTACTTACCCCTCACGGGGACGGAAACCATCCACCGCAACCGTCGTCGGGAACTGGGTCAGCCTGGTCACATTCTTTACTTACCCCTCACGGGGACGGAAACGTGATTCTGGACTTCCGGTCGAGGCAGACGTACCGATCACATTCTTTACTTACCCCTCACGGGGACGGAAACGACAATAATCCAAAGCGCTGCCTCGATCAGTGAGTACTCGCCGATCACATTCTTTACTTACCCCTCACGGGGACGGAAACCAGGTTCATTTCGACTTCTACAGCCCTTCCTCCCAGTCACATTCTTTACTTACCCCTCACGGGGACGGAAACCCTGCTCCCTTTTTGTAGGTGTCGCGCTTGATGTTGTGGAGTTACATTATTTACTTCCCCTCACGGGGACTACTACC

>NZ_AP018257|3|3|180982-181624|CRISPRCasFinder
GTCACATTCTTTACTTATCCCTCACGGGGACGGAAAC	GACATCAGAAGCCGCATTTCTTGCGTCTTCGAGGTTGTCTTT
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CTCACAAACTGCTCTAGACAAATCACAACCAAGCA
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GAAAGATGCCACGCTATCAAACCACAAATATAGAGTGAG
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GGCCAGCAGCAATCGAACAGGCGGGTAGTTCCCGATCCAGCCC
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CATCCACCGCAACCGTCGTCGGGAACTGGGTCAGCCTG
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GTGATTCTGGACTTCCGGTCGAGGCAGACGTACCG
ATCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GACAATAATCCAAAGCGCTGCCTCGATCAGTGAGTACTCGCCG
ATCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CAGGTTCATTTCGACTTCTACAGCCCTTCCTCCCA
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC

>NZ_AP018257|3|1|180982-181701|CRT
GTCACATTCTTTACTTATCCCTCACGGGGACGGAAAC	GACATCAGAAGCCGCATTTCTTGCGTCTTCGAGGTTGTCTTT
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CTCACAAACTGCTCTAGACAAATCACAACCAAGCA
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GAAAGATGCCACGCTATCAAACCACAAATATAGAGTGAG
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GGCCAGCAGCAATCGAACAGGCGGGTAGTTCCCGATCCAGCCC
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CATCCACCGCAACCGTCGTCGGGAACTGGGTCAGCCTG
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GTGATTCTGGACTTCCGGTCGAGGCAGACGTACCG
ATCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GACAATAATCCAAAGCGCTGCCTCGATCAGTGAGTACTCGCCG
ATCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CAGGTTCATTTCGACTTCTACAGCCCTTCCTCCCA
GTCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CCTGCTCCCTTTTTGTAGGTGTCGCGCTTGATGTTGTGGA
GTTACATTATTTACTTCCCCTCACGGGGACTACTACC

>NZ_AP018257|3|1|180983-181624|PILER-CR
TCACATTCTTTACTTATCCCTCACGGGGACGGAAAC	GACATCAGAAGCCGCATTTCTTGCGTCTTCGAGGTTGTCTTTG
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CTCACAAACTGCTCTAGACAAATCACAACCAAGCAG
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GAAAGATGCCACGCTATCAAACCACAAATATAGAGTGAGG
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GGCCAGCAGCAATCGAACAGGCGGGTAGTTCCCGATCCAGCCCG
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CATCCACCGCAACCGTCGTCGGGAACTGGGTCAGCCTGG
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GTGATTCTGGACTTCCGGTCGAGGCAGACGTACCGA
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	GACAATAATCCAAAGCGCTGCCTCGATCAGTGAGTACTCGCCGA
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC	CAGGTTCATTTCGACTTCTACAGCCCTTCCTCCCAG
TCACATTCTTTACTTACCCCTCACGGGGACGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018257.1\|WP_096695180.1\|176544_176931_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695185.1\|183967_185380_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018257.1\|WP_096695184.1\|183019_183937_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_AP018257.1\|WP_096695188.1\|187635_188655_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|377294
NZ_AP018257.1\|WP_096695192.1\|191731_192322_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_AP018257.1\|WP_096695174.1\|169365_169686_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018257.1\|WP_096695186.1\|185421_186147_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695182.1\|178418_180038_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366721
NZ_AP018257.1\|WP_096695191.1\|191402_191735_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695229.1\|175931_176240_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096729270.1\|169790_170471_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695176.1\|170557_172426_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_AP018257.1\|WP_096695178.1\|174094_174331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695181.1\|177389_178133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695177.1\|172468_173827_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236892
NZ_AP018257.1\|WP_096695189.1\|188660_189428_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|99707
NZ_AP018257.1\|WP_096695190.1\|189586_190255_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378704
NZ_AP018257.1\|WP_096695179.1\|174358_174745_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_AP018257.1\|WP_096695183.1\|182123_182885_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096695187.1\|186382_187630_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117

Protein	Function_ID	Function_description	E-value
NZ_AP018257.1\|WP_096695185.1\|183967_185380_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.75932e-15
NZ_AP018257.1\|WP_096695184.1\|183019_183937_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	6.49109e-76
NZ_AP018257.1\|WP_096695188.1\|187635_188655_-\|metal-dependent-hydrolase	gnl\|CDD\|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	5.85098e-20
NZ_AP018257.1\|WP_096695174.1\|169365_169686_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.29531e-32
NZ_AP018257.1\|WP_096695182.1\|178418_180038_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	3.83644e-48
NZ_AP018257.1\|WP_096695187.1\|186382_187630_-\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	4.87763e-06
NZ_AP018257.1\|WP_096695177.1\|172468_173827_-\|hypothetical-protein	gnl\|CDD\|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	3.38074e-05
NZ_AP018257.1\|WP_096695189.1\|188660_189428_-\|AAA-family-ATPase	gnl\|CDD\|99707	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.	0.00467854
NZ_AP018257.1\|WP_096695192.1\|191731_192322_-\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	6.04746e-25
NZ_AP018257.1\|WP_096695179.1\|174358_174745_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.685e-11
NZ_AP018257.1\|WP_096695176.1\|170557_172426_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	5.28396e-88
NZ_AP018257.1\|WP_096695190.1\|189586_190255_-\|hypothetical-protein	gnl\|CDD\|378704	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term. The broad host-range plasmid RK2 is able to replicate in and be inherited in a stable manner in diverse Gram-negative bacterial species. It encodes a number of co-ordinately regulated operons including a central control korF1 operon that represses the kfrA operon. The KfrA polypeptide is a site-specific DNA-binding protein whose operator overlaps the kfrA promoter. The N-terminus, containing an helix-turn-helix motif, is essential for function. Downstream from this family is an extended coiled-coil domain containing a heptad repeat segment which is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning.	1.2041e-05

>NZ_AP018257.1|WP_096695182.1|178418_180038_-|NAD(P)/FAD-dependent-oxidoreductase
MSRSPLFRKLAHTIATASFCDKNNISSVMGVSVLKSEMLYRRRNRRKFLTDMGKFALLGGAIGVGSGSFRNVLAAPPTVDAKIAIIGAGLAGLSCGYSLQKQGIQATVYEASNRAGGRCYSLEKFFPGQVAERGGEFIDNLHKTMLGYAQEFNLKLEDVSKEPGEVFYYIDGQAYKESAVVEEYRGFVAAMREDLRTLGNPTADSFTPADRTLDFISLKDYLDSRGAGNLIKKVIEAAYIGEYGAEINQQSCLSFLQFIHADKRSKFRPFGVFSDERYHLVGGNQQIAEALKNRLGGQIKYGKKLIAARKDSSGKVSLFFDDSSSDTFDAVVFAIPFSTLRTVDLSGLQLPQWKLDAINNLVYGTNSKLMVGFNSRPWAPLGSNGSSYANLPFLQSTWETNFIQATPSRAVLTNYSGGKLGASLNPQKLQQETANFLNNLKLVFTGADSSAVRSNNQYLAYLENWSLNPLYKGSYTCNQPGYFTTIANNEGKPVNTLYFAGEHTSSFYEWQGFMEGAALSGITAANQILKDFKVNTKAR
>NZ_AP018257.1|WP_096695181.1|177389_178133_+|hypothetical-protein
MSGNKYLNKIIKKYSVKINEFIPATKKISELINQWADGNLNHANFCGSFTKGTAISLSSEIDILLSFNPTIGTVSEAYNLLYNYLINTGYNVYKHDVSIGIIIDNCKFNLIPGRRESGNNHSLYKTKTDSCIKTNLSRHTLHVEDSFRIPEIKLTKIWRDLHHINFPSIYLELVVIKCIKGCEYRQIESNFVKILSFLANKLESTKCIDLANCNNILSDILSPEEKIRLANQAQISYEADGWEYVVW
>NZ_AP018257.1|WP_096695180.1|176544_176931_-|hypothetical-protein
MPKLIKTCCVALLAGTALFISMDVQRAKASLVDDLYNQCVKAYQLEQLNNQGLDYCNKVVQLKQQTEQRSRMINDTYSNPSFIYPNPGLINEATDIIRSGINKNECAYDTSCASTPQYPYAYPTNPGF
>NZ_AP018257.1|WP_096695229.1|175931_176240_+|hypothetical-protein
MQVKSEVVVKISGALPQATPAPNKKVQVEVTDQNGINFTAVINGKSWKKAEANVAQFADWAGAISGKLGKTEQGLEIIDAGIQIFEKKPKEVKQEETKQEDS
>NZ_AP018257.1|WP_096695179.1|174358_174745_-|GNAT-family-N-acetyltransferase
MVKQFSLPPGYQIRKLSKNFLDFLWYGTSEVYIAEYRNEEIGRIVFVDTGSKYLIHVVHVSPRHRRKKIGSYLVQTVVQLADKPIYLSTLSAKDFYTRLGFTIEHQQEIFGFIYGYIMVLQPTTQTNL
>NZ_AP018257.1|WP_096695178.1|174094_174331_+|hypothetical-protein
MKVYVDIGSYWPDGLSVNAAYEELLMQGVKIDRRTLSSAKSGTLTKSDFATLIKLRDWVRKLAHNDKLTIDDILKQEE
>NZ_AP018257.1|WP_096695177.1|172468_173827_-|hypothetical-protein
MPIFQAFDYEEFPNQDLVQFAQDTGRSFFGFVRQTFDGLIEIGRALQNLQYECLNTDKNAKKVFSKWLDSFGALRYIAKSAMDMYNWFKDLDPRIQQLIRENVQNWKISALRLLRHLTTEVLKEVVISGKKSAKQIKQLIARDSKTAVKSSLLPAQYQETDSLLSVSYQDSNLNGTESIESNPDVELAPGVRIVVKSNDAWNGSTGIITSIHQEGQFWVLLDNTVAQGDTASYLFKHSQLQPEVKIVGQAPVSKKMYSSEELQALIQEALATKERETAELEQARYKEIHDAALEAAKREIIAAQQHARHMTKQKEQLTEQLQQALDEIQRLRSLQAKNQQLEQRVDDLEKALEGANKDSWNNTLNKQAVKAINREVEKAVVPLMSEVERLKNLNADLKQELAQLDAFSSQQQQELDNYRHLSSQGNETQADYVQALKQINQEVPTKQELQYH
>NZ_AP018257.1|WP_096695176.1|170557_172426_-|DEAD/DEAH-box-helicase
MLVLRDYQEDLVTKTLGAWSNNTRKVLLQLSTGGGKTVIFAAIASQFVRHQEGVLVIAHREELILQAASKLESVTQQAPGIIKAGYKPTDSLIQVGSIQTLARRKNYPGAGLVIIDEAHHASANSYRKLIEAYPNALILGVTATPRREDGYGLRDVFDELICSISTKELIALGYLTDYKLIAGFKYSKHKVPRQRDFTKKELAEVAQDYKPEEVLKQWSNFGENKKTIIFAVDVEHSKSITTQFRMSSIACEHIDGETPLDARKEILDRFRKGATQVISNCAILTEGFDCPDSEVVIIARPTTSVTLWLQMIGRVLRPAPGKSFATIIDMTDNWYRLGRPCDYREWSLQPVTCDPDTMGARCCPSCHHVFKPMSALIRAFEIFNTQRCEFVTTYETDCANCGKPLRWVLEEGREIVGGSAPIIVSTEGAEWEEVPASVRPAVLRPIAENKKRKYRGNKGFFDRFEVIQDWFDTHRDVNLDEIKYAINLMDLNVRGESVIDTILIGIVSKIRTSSDWDDITKHMSERAGDIKKGVWDKLEAPEKQKLNNWKKRYVEELEVWATEENLQAIQRDLEACENFEMFEELWQIFNKEAIRIASKRIVSDKGAVIRDWIDKVDNLSYT
>NZ_AP018257.1|WP_096729270.1|169790_170471_-|hypothetical-protein
MFLAANIINVIYIASELMSDNKREYDVVLGGQSPAPSHAAVLGGIEGVKRRLSHQAIEHRIPALSDALNYGKEGLKLVLRALDDSEEKVHKYAYNLSKNREEPDVKAALEKYIQHSSFIRFDGFYYNHIQTRPQFLRFYQDGLVLAVIISDYESNLPELVAKWLNKEHISHHGRWTYRIESNTIGFLRNSDNPYCKGEIGKYGETIFLDWGYATFKYYFIHMPNIL
>NZ_AP018257.1|WP_096695174.1|169365_169686_+|CHAT-domain-containing-protein
MTSLTSDLGAELVVLSACDSGLGKEVKGESKDGLTRGLMYAGSKRAVVSLWQVSDEGISMSIFYKAVLQGKVPTVALRKAQLQLWNSKEWQSPYYWAPFTLQSDWK
>NZ_AP018257.1|WP_096695183.1|182123_182885_-|hypothetical-protein
MGKFKDYTGQKFGRLECISFSEPQRVNGRTFWKCKCDCGKIVDVGITNVVNGTTKSCGCLNSSFKDYTGHKFGRLECISLSTPTRINNKTIWKCKCDCGKIINASLESLISGNKKSCGCLRFSSKSYYKDYTGQKFGRLECISISTPARINGRTFWKCKCDCGKIVDIDIARAIAGDTKSCGCLQNTRKDYTGQKFGRLECIAPSSLSNVKSAKFWKFKCDCGKIIDVNIADVVSRGKKSCGCLKRSCNFISI
>NZ_AP018257.1|WP_096695184.1|183019_183937_-|DNA-cytosine-methyltransferase
MKLSDLRVLDIFAGCGGLSLGFQNAGFSVVGAIDNWQLAINIYSKNFDHPVYNCDLSIPEDSYHIFKNLNCNFIIGGAPCQDFSNAGLRNEDNGRGELSISYARIIQHVRPQIFVLENVERYRKSNKYLQVKEIFKACNYGLTETILNASLCGVPQARKRYICIGVLGGADNALLSLLHEGLAPRPMTVRDYLGDSLGTEYYYRHARSYQRKAIFSIDEPSPTIRGTNRPISKNYIPHKNDACRDLRRVRALTTLERSYIQTFPSSFNFDIENQTKTDLEQVIGNAVPVKLGEYIAVAISKYLGV
>NZ_AP018257.1|WP_096695185.1|183967_185380_-|pentapeptide-repeat-containing-protein
MIASDLLVLYKRIKPIYKFYFLLFLIIFTVFKNYAYILAALIIGASTIAVLFTLWTRSKTNFKAQHIIFESYLERMSQILMREKCYPKHRRKNLELTDTVIKFIITDTSNILEQLQGNSNFQNYALNYLRSFEIQTEVNYVVLNNLNLKYLKFDDFAFDSTSFNSSNLENASFKQAYFDSCDLGSANLQNASFAYASIRVSDFTNAKLKNASFEEAKLTNTDFSGADLTNANFKAARLAGVNISHAKMYGVKNLTVEQVLQTRNWKLAYFDIDFKRHLKNYFSNNNSTDKNKDKPIINKIFYAKLVYASLLSLLLTIYILNYLSPKNINNFNYSFAENINKCLSSSRKFIAEIDKDAWVCVNKPDNTKNIWFFVTRLNVEGKISSLITAKYLDRADANIYEKLVSIDDYKSNDEVMFYMGRRRFRGWITSPRPYLIKKHKKDIDAILKAMDNYEKKPVQNIQTAPDNTGI
>NZ_AP018257.1|WP_096695186.1|185421_186147_-|hypothetical-protein
MWRIMRGQLPCLETSANCLQQLQEKATGASPLLKELDTRIEEANNKIAEAKANNKKSIRMAVLSPALQYLLGPTVAPGQPQRGGSGLIDNILGVVRGDIGLINGLLRVVGVPFFENSQGGNADAQRNAILIGDLQIKVAELQRGRAKLADEIREKVAISLVKFDEARTDFQTSQIIGARSIDLFKVYELRYVRGNTDTEGYLAQQSRLDREKASVYSSWAKMRRSLFELKLLVLSVKEAEI
>NZ_AP018257.1|WP_096695187.1|186382_187630_-|hypothetical-protein
MKALFIATVTVLSLMAPLATAQKSDAPENVEVFKGTGNTEKSLQLSVTVEAPEHLLVKEDEYIREGQPIADKPEERKRLDQQRTSLVLQKNNLFCKQVPEPLKPKEAPQVAPLPSANYQEEESFVAQAQLKLQQAQAILAQRIPILKADNPEKRASMEKVEAQFRGAQEKVKEQEELLKSMQDMQLQAPIIRHEEAKLKQLQSETEQLQSALQREQALMASAGTQQQQELQNLEIAVQVARSDLQIALGRLDGARNNRKLIEYKATIESAQRVEEENRSQQTYSQQLGQYAQAVREKDYQLTQLHNQLIAIDDKLAQIPIIRAPRSGFIRRIKNWVGNNGKYTTTLTIGSSPNNNSSGSQSNNKQNKTTMEATPSLQPTSPASTPSTPGAQIITDKSTCPQPTINTNTTSTGAKQ
>NZ_AP018257.1|WP_096695188.1|187635_188655_-|metal-dependent-hydrolase
MMGVTHTTLSITGVAIITGSVNPRVLLIAAVASQIPDLDTTKSWIGKVFYVVSSRIEERFPHRSLTHSIFISFLIALVTIPLLLANWIDWTLWIAAPLGHLISCFADCGTKLGCQFFYPLNHDYWVIGLNPNNRVETGKTSDYAILSTTVLVFCITYYLIAGSGGIGAYMTKTFFPTNQTAIEMLRRENQRAISVQVEGIRKVDNSRVNETYWAISAAGSNLVARDKAGNVFRIGEGGEVIPKRVNLLPDRLDIKVRRQKIEEASATEWVNSLAENYLVTGTLEIEDSGDLQLPIVPPGMMATVTKTSNGVYLEHASRKDLKPLGEYYILKGEVLIKQL
>NZ_AP018257.1|WP_096695189.1|188660_189428_-|AAA-family-ATPase
MLVQKKSICITGEVGIGKTYLAQQVVKALGKKCCYGYYRGDNTKCLQQIASSLNISLNQIDNEGAEGKPLTAKQLKEDIAECLGETILICDHFHRWPASLKGWVEDLHESGATILLLGNHRDLEGVTYKIPRLALSPLKDDEIRDIIWRQAKQLSHALTTNEVVQMAGRAGGNPLLAKRMVQELHQGVESTNIQDGNNYRSITPFLMFTAGLIGAVRFVGLATGDIRLRIVGGVFITFLFSFRYLSALFPKRSRK
>NZ_AP018257.1|WP_096695190.1|189586_190255_-|hypothetical-protein
MSEQVSTDQETELSTNDELNTQKPGAVEETETTEQVKKPLRERVFAACEELITEGRNVTRDSVREKTRGSDRDLSQYIKEWRAAKAASNTQTSEGAEDIDDSETAGKLVVQNKNDIVSSKNDNNIQTPDQVVQTVKTRVVKKRNKSLGDAVRDGANQAAGVLVTEERVFQSLLENPDLLPLDLKQEVEKAMNDSDELMKSRSARFELSFFVEDALSSLRGNA
>NZ_AP018257.1|WP_096695191.1|191402_191735_-|hypothetical-protein
MSNFKKLLESAKNQPIDEAPSSPNGSTNDSVDNDSTNELKQAPVATKKVSPRKNAETGKSKNPDYRQTTIYVRKDLQRKLIRLLEDQEYKGDFSDWVEECMVSKIKRQKS
>NZ_AP018257.1|WP_096695192.1|191731_192322_-|ParA-family-protein
MIITVLGFKGGVAKTTTALHLAAYLQQYEPTLLVDGDPNRSASAWASRGKIPCDLCDEKAAIKQAPKYRHIVIDTKARPNEEDLEHLVEGCDLLILPTTPDALALDAMLLMVKSLPKGTNYKILLTIVPPKPSRAGEEALALFQEENLPHYPFVIRRFSAYQRAALSGCAVFDSKDRSSKTAWGDYQKLGREIVKG

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Crispr_ID: NZ_AP018257_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018257_4

324571-324667

TypeV-U3

A:N

Consensus_repeat	Method
AAAGGAATTGAGGATTGAAACGA	CRISPRCasFinder

1 spacers

c2c10_CAS-V-U3

The CRISPR arrays of NZ_AP018257_4

>merge|NZ_AP018257|4|324571-324667|CRISPRCasFinder
AAAGGAATTGAGGATTGAAACGACTACAAGTGTCCTAATATTTATATCTGGCATGAAAGTGACAATTCCTTTTTAAAGGAATTGAGGATTGAAACAA

>NZ_AP018257|4|4|324571-324667|CRISPRCasFinder
AAAGGAATTGAGGATTGAAACGA	CTACAAGTGTCCTAATATTTATATCTGGCATGAAAGTGACAATTCCTTTTT
AAAGGAATTGAGGATTGAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018257.1\|WP_096694998.1\|333607_333940_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694985.1\|318756_319053_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694993.1\|327063_327486_-\|DUF488-domain-containing-protein	unknown	unknown	gnl\|CDD\|377317
NZ_AP018257.1\|WP_096694986.1\|319330_320371_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379160
NZ_AP018257.1\|WP_096694995.1\|328541_329876_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694991.1\|326273_326480_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694992.1\|326577_326934_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_AP018257.1\|WP_096694981.1\|315179_315434_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694980.1\|314843_315122_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694990.1\|325846_326182_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694987.1\|320386_323608_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|368641
NZ_AP018257.1\|WP_096694996.1\|330110_330635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694989.1\|324821_325793_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225973
NZ_AP018257.1\|WP_096694982.1\|316024_317575_+\|transposase	c2c10_CAS-V-U3	-	gnl\|CDD\|284650
NZ_AP018257.1\|WP_096694983.1\|317882_318287_-\|DUF3085-domain-containing-protein	unknown	unknown	gnl\|CDD\|371450
NZ_AP018257.1\|WP_096694988.1\|323818_324394_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694984.1\|318427_318751_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369367
NZ_AP018257.1\|WP_096694997.1\|331877_333437_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_AP018257.1\|WP_096694994.1\|327496_328291_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018257.1\|WP_096694979.1\|313849_314518_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018257.1\|WP_096694987.1\|320386_323608_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|368641	pfam05860, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	1.98328e-28
NZ_AP018257.1\|WP_096694993.1\|327063_327486_-\|DUF488-domain-containing-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	3.03339e-16
NZ_AP018257.1\|WP_096694989.1\|324821_325793_+\|HNH-endonuclease	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	2.74672e-89
NZ_AP018257.1\|WP_096694986.1\|319330_320371_+\|HNH-endonuclease	gnl\|CDD\|379160	pfam13395, HNH_4, HNH endonuclease. This HNH nuclease domain is found in CRISPR-related proteins.	8.284e-09
NZ_AP018257.1\|WP_096694982.1\|316024_317575_+\|transposase	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	3.22981e-11
NZ_AP018257.1\|WP_096694983.1\|317882_318287_-\|DUF3085-domain-containing-protein	gnl\|CDD\|371450	pfam11284, DUF3085, Protein of unknown function (DUF3085). This family of proteins with unknown function appears to be restricted to Proteobacteria.	9.59998e-15
NZ_AP018257.1\|WP_096694984.1\|318427_318751_+\|hypothetical-protein	gnl\|CDD\|369367	pfam07444, Ycf66_N, Ycf66 protein N-terminus. This family represents the N-terminus (approximately 80 residues) of Ycf66, a protein that seems to be restricted to eukaryotes that contain chloroplasts and to cyanobacteria.	0.00042723
NZ_AP018257.1\|WP_096694997.1\|331877_333437_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	3.05429e-14
NZ_AP018257.1\|WP_096694992.1\|326577_326934_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.59751e-08

>NZ_AP018257.1|WP_096694988.1|323818_324394_-|hypothetical-protein
MQSLNTEIGKYLNFNDFCTCTNTYKKYASQIDPFPSNSGSITAIKNLCEHIIDPIIDYFGEENFQLTYGFCSKDLKRYLEKKDPATNQKNGRIDPSTDQHMALETNRNGQYYCKRPGASCDFLITNVPSNQVVDWILHAHLKFDSLFYYGETRPIHISYGLEHKRAVWTFSNKGMPTKKGIENWVKLALNI
>NZ_AP018257.1|WP_096694987.1|320386_323608_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MTGVSIRLYWWQIEIAIASAITLYTNSSVAQITPDATLPNNSNVTLEGNTFNITGGSTAGGNLFHSFKDFSIPTGSGATFNNAIDIQNIISRVTGKSISNIDGLIKANGGANLFLINPNGIIFGQNARLDIGGSFLATSASSIKFGDSFEFSAVNTESKPLLTVTAPVGLQFGANPGLIQVQGNGQGARNFNSPIIDTQSDLRVQPDKTLALVGGDINLEGATLKTAGGRIELGSVAGNNLVSLTLANKGFALGYSGVQNFGNIQLSQRATVDASGEGGGDIQVQGRRITVTNRSQIQTSTLGAKQGGDLVVNATESLEASISSSLIANAYQKATGNAGNVKINTRELLLIDRATMGAFTFGAGKGGNLTVEAQDIQLIGTLAENPNATGLSVSAQPNSTGDAGSLTIKTNTLLVQDGAQVSAVSSGTGKAGSLSVDAQDIQLIGTTANGRFPSGLGVSADESLTGDAGSLKIKTNTLLVQDGAQVSAATFGVGKGGSLSVNAQDIQLIGRGVNNRLPSALGTSAQQNSTGDAGDLTITTNTLLLHSGAEVSTDTFGAGKGGNLNVDAQDIQLIGRSTANHPSRLGASAMPNSTGDAGSLTIKTNTLLVRDGAQVTAFTSGAGKGGSLSVDAQDIQLIGTTANGRFASVLAASVLPNSTGDAGSLKIKTNTLLLRSGAQVSTATAGAGKGGSLSVDAQDIQLIGRSVNNQLPSTLAASTLPNSTGDAGDLTIKTNTLLVRDGAAVLTVTLGSGKGGFLSVDAQDIQLIGKSVDNQFSSGLGASAMLNSTGDAGNLTIKTNTLLVQDGAGVYVESSGTGTAGNLTIGANSINLDQKALLTANTRSNRTDVTQATININSRDLILRRNSSITTNARGTQVIGGDININTDVLGAFENSKITANSDNFRGGNINIITQGLFLSPDSEITASGATSALNGNINITTLIEPSRGLVEIPINLVDASNQISNACTPGNPKFDSTFTVTGRSGLPISPYEQLQDQSTNSAWVRFQAKPENPNAVRINKPDLIAAAPTIIEASGWIADKSGNIELVAPASRSLQTSNSVSCFELKPQAPQN
>NZ_AP018257.1|WP_096694986.1|319330_320371_+|HNH-endonuclease
MSEAKFFAVDPKLEDYWRAIILFGRNVASYKFALAKSLLELAPQGKTIITLEDLAEPYSRHIVEHIKEVKTQTTSRSSRFLDACQQFGAQEISKTKLIDTTVSLGFENVIDAFHNLSAGETPVRFFTDERKGAAKGIRLTDELFELLQVLQAENLPSEVEARWRLVENAWELKISPKLISVDYDPTRELLFTFGENRRRVDLTSCRDGLNGYQKGRCFYSFAEISILYGSPNLADVDHFFPFVLHEYIKNIDGVWNLVLASVDCNRGKDGKFDRLPHIDYLERLYNRNEFLITSHHPLRETLIKQSGSTPEKRRLFLQAVYNTSQAILGNGKSDGWKAPFEYPNTF
>NZ_AP018257.1|WP_096694985.1|318756_319053_-|hypothetical-protein
MCEISDATFEVESAGRARAIRQGRKNVHAYVVGTLRALSWDILDNHVVHQLINQGYQIITYNLHREHHQFYYQDSVKYSPIIEAKSVILNNKVALARL
>NZ_AP018257.1|WP_096694984.1|318427_318751_+|hypothetical-protein
MLNLAQVNVALGNTPATQLGLIYMILGAVYLVCWIVWLKSKATINNTFICQIIQTILVTLALELCGFLMLYHGWRLDPLLQFSQVLLFLLLLYFIIRDSLSQMLNRN
>NZ_AP018257.1|WP_096694983.1|317882_318287_-|DUF3085-domain-containing-protein
MKLHFLKRDVQKLLEHTKNSEEHVAVYGDESTNQPGLLIVGDEGIYLISNGKPGLFRDGAFEQAIPESPAFVVYATECNPLTLPFEEWRRIKEESFGSDDGIDFLETDFIEAALLRPGEYIQLEVTEEGIDALY
>NZ_AP018257.1|WP_096694982.1|316024_317575_+|transposase
MKAKKQQTTEESYTVITPVIFCDDEPQIDRLMNACGVVRAVTYNKLGSLQGWNLNWMFAAPQIKPILPPESVGMSKCRKIWEWSVNDCMKAIAAQQEAAIALIIREIWQKLPMQVNQQKRIAWLSETYNKKLHEQALILFPKCEIELSREKLLNLLYTNPTADNWIHRRIRKHFQRGHTYKRNQIVYQGAGYKCKRVNRHSVVLTVMGEDARQKITLKLRSRQIIKGQIRLIRNEQGVLEVHWTRTRTIILPTQSKLPVKIGLDKGYTEGFYTSDGIQVAPGLGKLMSDKTNRITAKNRNRYRIRAFSESLKKHDPVKAARILKNNLGYKVKSRKLQNEKNTIKNFIRRDLRQVITTNVELFCEDLCSPIKSKTAAKSINRKLNQWMKGELQTSVDKIALETGSKVTLVNCAYTSQTCSLTGTLLGFRKGDRFTCHTGVVLQADLNAAKNIRNRGTDYEIQRFMKSEVVLVVLLNRTIRYLVSIGKSISDALELGWLNPKFKTKALKLETIYHSQG
>NZ_AP018257.1|WP_096694981.1|315179_315434_+|PEP-CTERM-sorting-domain-containing-protein
MVVDFGIAFDAPRYTLERTSGASLTLTGEVGRAGGYIYTDPGANITLSSSKTSVPEPASLLGLLFGAGGIAVYRKSSKSKAKVS
>NZ_AP018257.1|WP_096694980.1|314843_315122_+|hypothetical-protein
MISTVRQIKFCVALIGLVAGSVFHAAPVLGAILTRQEFSGDFTRVSVSPFLENIVPDKSEYSGFVAYSDDGTLSDWEVNVNDLNLNLNADSS
>NZ_AP018257.1|WP_096694979.1|313849_314518_+|PEP-CTERM-sorting-domain-containing-protein
MNRLYTPWVFGIVTLVSFGSSLRSAKAQTTYTFNATYDGSVLTRQIAENITQTSISGLSNDALYGLTKASGIAYIKTNPIDGSYRFSTNPQTFGLENQPLGGVTLFGEGGNKLFYQVENGTGVFNPETLTTSGSNTNIITGGEGLFEGATGTLTGSEVYQVANLLVDPTSASKGIVRINGAIVVPATQKVPEPNATAAFVAIGIGATFLLRRRRLSREQKLS
>NZ_AP018257.1|WP_096694989.1|324821_325793_+|HNH-endonuclease
MTKNLAYYSKKFSPKVKTTNPSGLNVNRSMGTAPNKPILLLSIIELISRGGIRKNQIPLSGELVATFMNVWRHLEPNRNPDIGQPFFYLRSDGFWHFQPNPGFELAINSKAKLVSAGALKQAVEYAYFDDELWQILQDSHDRSVLIQVLIDEWFSGASNIEGILQVNVFAQLQEELERAGGKIYQPEELNSEQKVIVRDAAFRKIVATTYGYRCAFCGYQVLDIQGQGIIDGAHIKPFAKYFDDRIDNGLSLCKNHHWGFDRGWFSINDDYTIIVSEELREEAPNCKPMREFVGESIILPAKQQYYPRIEALRWHRENIFDAA
>NZ_AP018257.1|WP_096694990.1|325846_326182_+|hypothetical-protein
MPWLYIPHKKPEEIKEDDELWYIGFDKIYFVVEEDCIYFEYQSDSKANVISSRNKDNFAVRVAPNGKVKGKGSVTHKSTIEYIYSWYKIATGEIQANLPSKFIGSLIYDSE
>NZ_AP018257.1|WP_096694991.1|326273_326480_-|hypothetical-protein
MKKKINTSPVYTCDYPVYDYEDNSVYIVIYYNGKKVKILKKEDAPSLVEALETGESPEDIDFHLSTYL
>NZ_AP018257.1|WP_096694992.1|326577_326934_+|nuclear-transport-factor-2-family-protein
MDLKETLMALEEKFWKASSAANVNLIREYLTDDGLTVGNFGVLDKETTIAVNEGQPPFLFWRIDSAPQILQLATDSAVVIYKATAQREGREPFTVMISSTYVNRLGSWKLVFHHQTPL
>NZ_AP018257.1|WP_096694993.1|327063_327486_-|DUF488-domain-containing-protein
MICQDINTNHYILTFGYGNRKDYYEFIQYLKSFDVKYVIDVRNSPRAWSRKWYGQEIEKLCESQDVKYISMPALGNTSGNSKWIPPSTSEAAQALEEVSQIIQSQTSLLLCAELQSARCHRTEVALKLQEITKLPVQHLE
>NZ_AP018257.1|WP_096694994.1|327496_328291_-|hypothetical-protein
MDTRKILIATKTYPSISTKYRETVCTAGVLLSDDEKPLQWIRIYPIPFRYMDFDQRYPRWSIIEADIERNDKDYREESFRINPNTIKIVRKIGTLNNWHERKSLLLPLKFDSIKQIKEQNKSLGIIKPLSIKKYYSKPTEREWAPKQQAVLDQLDLFEESVELEKIPYQFGYEFTDEAGDKHKYSISDWEIMQLYRNCRNNSKAKSIEAKEQESLDKVKQKLENFAVNNDLHFIVGNLKNHKNSFMIIGLFYPPIVQSEQLSLF
>NZ_AP018257.1|WP_096694995.1|328541_329876_+|hypothetical-protein
MITQFQGFDITSLDELTISPSQFNDFMIEADSCVHPIGALYTSTVRILRHASWLAEQKATLTKQEYKELLRKYNWEGEEKAHLKVHEAFGTFAPHQLAQIEPRTIFQIALNLKKYQSVIAQMLSLPIITQNKVRGFMKKCHKARATKETEEATIWRMMPDKKRACVIGPIYNQSVGVMLEEMMDKSGKSAQFIVEKALIAHYESEYATQEVEAVSCEAQSVDVVGSDEQAPIVGVVVDSEEVQSVDAVIDSETAPAYSEAALNSSAASWDKDLVAHEESLNETSEYNPWYDEELDVQEAWSFEPEEKDDVIEDYEFLTSEVSKTTAPVGFTSSTVSVSGTMVLSAVEELVQALQTATSWQEINEALKTHEEYKEEAWDALTPVERRRVIELTPPTVIRLSNAKRAGLITDFRVERECVYQIKQSGCLFWDIVFEWRIDEYFARL
>NZ_AP018257.1|WP_096694996.1|330110_330635_+|hypothetical-protein
MPLSSSAVKNVINNSIVLNDDIIYEYIDTSPPKGSGSAPTVRTLNLKETLEQIDSDAAQALAQIDKQLLEFEAALKNPKVRDELEKRKAQFRVELTEFLNDEQKYKEALENPYFPQNIKYLLMRAKKNPEEIDKFIEEQFQLKNLAEQQKLEIRKRRDLAKKQARERALRMKLR
>NZ_AP018257.1|WP_096694997.1|331877_333437_+|GMC-family-oxidoreductase
MTRGVSRRRFLQTSLATTASVGIFNLQKAFAERSAERVEAVVIGSGFGGAVASLRLGTAGIETVVLERGRWWEITDAGDTFCTSQKPDGRSTWLSPTTLALFGQTPIDVYTGVLDIKVGDGISALRGAGVGGSSLVYNGITYQPTQELFYQVFPRSINYEELDRVYYPRVRSILKPSPIPDDILATQFYLASRIFLEQATKANLKARKLDINVDWDIVRQEIAGTKVPSTILGEIYYGINSGAKQSLDRNYLKMALSTGCVQIRPLHVVTEIEESDNNRFRITCNQINEQGVVVDKKTIVCRYLFLAAGSIGTTELLLRAKNTGKLRRLNEQVGKLWGNNGDTLGLIATVGQTNPTQGGPAAIAIEDFDNPISPVAIQQFPFPGLPEGTYNVFGIALTKPEGYFTYDASKQTANLVWPQNSANDQKIKNAALDTYQRLNQANGTTLAAAPGTGITGHPLGGATIGAVCNPYGRVHGYPNLFVVDGAFIPGSTACTNPSLTIAALAERSMDRFLNGNFKD
>NZ_AP018257.1|WP_096694998.1|333607_333940_+|hypothetical-protein
MPWLYVPYKKSEEIKDSDELWYVGFDKIYFQVEENCIYFEYQSNSKASVSASRNKDNFAVRVAPDGKIKGKGSVTHKATIENAYNWYKIATGETHTNLSSKFVDSLIYDE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP018257_1	1.1\|137311\|46\|NZ_AP018257\|CRISPRCasFinder	137311-137356	46	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	137311-137356	0	1.0
NZ_AP018257_2	2.1\|155075\|43\|NZ_AP018257\|CRISPRCasFinder	155075-155117	43	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	155075-155117	0	1.0
NZ_AP018257_3	3.1\|181019\|42\|NZ_AP018257\|CRISPRCasFinder,CRT	181019-181060	42	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181019-181060	0	1.0
NZ_AP018257_3	3.2\|181098\|35\|NZ_AP018257\|CRISPRCasFinder,CRT	181098-181132	35	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181098-181132	0	1.0
NZ_AP018257_3	3.3\|181170\|39\|NZ_AP018257\|CRISPRCasFinder,CRT	181170-181208	39	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181170-181208	0	1.0
NZ_AP018257_3	3.4\|181246\|43\|NZ_AP018257\|CRISPRCasFinder,CRT	181246-181288	43	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181246-181288	0	1.0
NZ_AP018257_3	3.5\|181326\|38\|NZ_AP018257\|CRISPRCasFinder,CRT	181326-181363	38	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181326-181363	0	1.0
NZ_AP018257_3	3.6\|181401\|35\|NZ_AP018257\|CRISPRCasFinder,CRT	181401-181435	35	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181401-181435	0	1.0
NZ_AP018257_3	3.7\|181473\|43\|NZ_AP018257\|CRISPRCasFinder,CRT	181473-181515	43	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181473-181515	0	1.0
NZ_AP018257_3	3.8\|181553\|35\|NZ_AP018257\|CRISPRCasFinder,CRT	181553-181587	35	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181553-181587	0	1.0
NZ_AP018257_3	3.9\|181625\|40\|NZ_AP018257\|CRT	181625-181664	40	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181625-181664	0	1.0
NZ_AP018257_3	3.10\|181019\|43\|NZ_AP018257\|PILER-CR	181019-181061	43	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181019-181061	0	1.0
NZ_AP018257_3	3.11\|181098\|36\|NZ_AP018257\|PILER-CR	181098-181133	36	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181098-181133	0	1.0
NZ_AP018257_3	3.12\|181170\|40\|NZ_AP018257\|PILER-CR	181170-181209	40	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181170-181209	0	1.0
NZ_AP018257_3	3.13\|181246\|44\|NZ_AP018257\|PILER-CR	181246-181289	44	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181246-181289	0	1.0
NZ_AP018257_3	3.14\|181326\|39\|NZ_AP018257\|PILER-CR	181326-181364	39	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181326-181364	0	1.0
NZ_AP018257_3	3.15\|181401\|36\|NZ_AP018257\|PILER-CR	181401-181436	36	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181401-181436	0	1.0
NZ_AP018257_3	3.16\|181473\|44\|NZ_AP018257\|PILER-CR	181473-181516	44	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181473-181516	0	1.0
NZ_AP018257_3	3.17\|181553\|36\|NZ_AP018257\|PILER-CR	181553-181588	36	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	181553-181588	0	1.0
NZ_AP018257_4	4.1\|324594\|51\|NZ_AP018257\|CRISPRCasFinder	324594-324644	51	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	324594-324644	0	1.0
NZ_AP018257_2	2.1\|155075\|43\|NZ_AP018257\|CRISPRCasFinder	155075-155117	43	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	126823-126865	12	0.721

1. spacer 1.1|137311|46|NZ_AP018257|CRISPRCasFinder matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtattaatcacatttaactggttgccatctagggttgcttcaacga	CRISPR spacer
gtattaatcacatttaactggttgccatctagggttgcttcaacga	Protospacer
**********************************************

2. spacer 2.1|155075|43|NZ_AP018257|CRISPRCasFinder matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cacctccaccaccaccacccccaccaccacaatgtcccgtagg	CRISPR spacer
cacctccaccaccaccacccccaccaccacaatgtcccgtagg	Protospacer
*******************************************

3. spacer 3.1|181019|42|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gacatcagaagccgcatttcttgcgtcttcgaggttgtcttt	CRISPR spacer
gacatcagaagccgcatttcttgcgtcttcgaggttgtcttt	Protospacer
******************************************

4. spacer 3.2|181098|35|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctcacaaactgctctagacaaatcacaaccaagca	CRISPR spacer
ctcacaaactgctctagacaaatcacaaccaagca	Protospacer
***********************************

5. spacer 3.3|181170|39|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gaaagatgccacgctatcaaaccacaaatatagagtgag	CRISPR spacer
gaaagatgccacgctatcaaaccacaaatatagagtgag	Protospacer
***************************************

6. spacer 3.4|181246|43|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ggccagcagcaatcgaacaggcgggtagttcccgatccagccc	CRISPR spacer
ggccagcagcaatcgaacaggcgggtagttcccgatccagccc	Protospacer
*******************************************

7. spacer 3.5|181326|38|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

catccaccgcaaccgtcgtcgggaactgggtcagcctg	CRISPR spacer
catccaccgcaaccgtcgtcgggaactgggtcagcctg	Protospacer
**************************************

8. spacer 3.6|181401|35|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtgattctggacttccggtcgaggcagacgtaccg	CRISPR spacer
gtgattctggacttccggtcgaggcagacgtaccg	Protospacer
***********************************

9. spacer 3.7|181473|43|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gacaataatccaaagcgctgcctcgatcagtgagtactcgccg	CRISPR spacer
gacaataatccaaagcgctgcctcgatcagtgagtactcgccg	Protospacer
*******************************************

10. spacer 3.8|181553|35|NZ_AP018257|CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

caggttcatttcgacttctacagcccttcctccca	CRISPR spacer
caggttcatttcgacttctacagcccttcctccca	Protospacer
***********************************

11. spacer 3.9|181625|40|NZ_AP018257|CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

cctgctccctttttgtaggtgtcgcgcttgatgttgtgga	CRISPR spacer
cctgctccctttttgtaggtgtcgcgcttgatgttgtgga	Protospacer
****************************************

12. spacer 3.10|181019|43|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gacatcagaagccgcatttcttgcgtcttcgaggttgtctttg	CRISPR spacer
gacatcagaagccgcatttcttgcgtcttcgaggttgtctttg	Protospacer
*******************************************

13. spacer 3.11|181098|36|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctcacaaactgctctagacaaatcacaaccaagcag	CRISPR spacer
ctcacaaactgctctagacaaatcacaaccaagcag	Protospacer
************************************

14. spacer 3.12|181170|40|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gaaagatgccacgctatcaaaccacaaatatagagtgagg	CRISPR spacer
gaaagatgccacgctatcaaaccacaaatatagagtgagg	Protospacer
****************************************

15. spacer 3.13|181246|44|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ggccagcagcaatcgaacaggcgggtagttcccgatccagcccg	CRISPR spacer
ggccagcagcaatcgaacaggcgggtagttcccgatccagcccg	Protospacer
********************************************

16. spacer 3.14|181326|39|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

catccaccgcaaccgtcgtcgggaactgggtcagcctgg	CRISPR spacer
catccaccgcaaccgtcgtcgggaactgggtcagcctgg	Protospacer
***************************************

17. spacer 3.15|181401|36|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtgattctggacttccggtcgaggcagacgtaccga	CRISPR spacer
gtgattctggacttccggtcgaggcagacgtaccga	Protospacer
************************************

18. spacer 3.16|181473|44|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gacaataatccaaagcgctgcctcgatcagtgagtactcgccga	CRISPR spacer
gacaataatccaaagcgctgcctcgatcagtgagtactcgccga	Protospacer
********************************************

19. spacer 3.17|181553|36|NZ_AP018257|PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

caggttcatttcgacttctacagcccttcctcccag	CRISPR spacer
caggttcatttcgacttctacagcccttcctcccag	Protospacer
************************************

20. spacer 4.1|324594|51|NZ_AP018257|CRISPRCasFinder matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ctacaagtgtcctaatatttatatctggcatgaaagtgacaattccttttt	CRISPR spacer
ctacaagtgtcctaatatttatatctggcatgaaagtgacaattccttttt	Protospacer
***************************************************

21. spacer 2.1|155075|43|NZ_AP018257|CRISPRCasFinder matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 12, identity: 0.721

cacctccaccaccaccacccccaccaccacaatgtcccgtagg	CRISPR spacer
caccaccaccaccaccaccaccaccaccacacgaaccgacgaa	Protospacer
**** ************** ***********  . ** .....

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

246677 : 303323

Microcystis_phage(11.11%)

transposase,integrase

attL 245371:245387|attR 293478:293494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
245371:245387	attL	NA	NA	NA	NA
WP_096694929.1\|246677_247451_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_096695216.1\|247529_248282_-	formylglycine-generating enzyme family protein	A0A075BSL8	Microcystis_phage	8.9e-76	58.6
WP_096694930.1\|249666_250038_-	glyoxalase	NA	NA	NA	NA
WP_096694931.1\|250377_250596_-	hypothetical protein	NA	NA	NA	NA
WP_096694932.1\|250864_251845_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_096694933.1\|252155_253118_-\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	1.0e-07	21.9
WP_096694934.1\|253187_254120_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_096694935.1\|254447_255284_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_096694936.1\|255804_256683_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_096694937.1\|257151_257424_-	hypothetical protein	NA	NA	NA	NA
WP_096694938.1\|257612_257834_-	hypothetical protein	NA	NA	NA	NA
WP_096694939.1\|258503_258956_+	hypothetical protein	NA	NA	NA	NA
WP_096694940.1\|259272_260253_-	hypothetical protein	NA	NA	NA	NA
WP_096694941.1\|260688_261450_-	ribonuclease HI family protein	A0A076FI68	Aureococcus_anophage	2.1e-08	34.9
WP_096694942.1\|261509_261830_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096694943.1\|262463_265745_-	DUF3987 domain-containing protein	D6PH80	uncultured_phage	1.0e-14	33.0
WP_096694944.1\|266058_266343_+	transcriptional regulator	NA	NA	NA	NA
WP_096694945.1\|266785_267001_+	hypothetical protein	NA	NA	NA	NA
WP_096695217.1\|267880_268123_+	hypothetical protein	NA	NA	NA	NA
WP_096694946.1\|268251_269781_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_096694947.1\|269890_271621_-	DUF3991 domain-containing protein	M1NXP9	Cellulophaga_phage	1.3e-16	29.5
WP_096694948.1\|274161_274476_-	hypothetical protein	NA	NA	NA	NA
WP_096694949.1\|274699_274945_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096694950.1\|275507_275891_+	hypothetical protein	NA	NA	NA	NA
WP_096694951.1\|276677_276857_+	hypothetical protein	NA	NA	NA	NA
WP_096694952.1\|276975_277842_+	hypothetical protein	NA	NA	NA	NA
WP_096694953.1\|278254_279433_+	hypothetical protein	NA	NA	NA	NA
WP_096694954.1\|279448_280789_+	replicative DNA helicase	A0A2H4PAV8	Aphanizomenon_phage	1.6e-75	38.3
WP_096694955.1\|280928_281135_+	hypothetical protein	NA	NA	NA	NA
WP_096694956.1\|281295_281553_-	DUF1349 domain-containing protein	NA	NA	NA	NA
WP_096694957.1\|282709_283141_+	hypothetical protein	NA	NA	NA	NA
WP_096695218.1\|286067_286565_+	hypothetical protein	NA	NA	NA	NA
WP_096694958.1\|286950_287199_+	hypothetical protein	NA	NA	NA	NA
WP_096695219.1\|287439_287697_+	hypothetical protein	NA	NA	NA	NA
WP_096694959.1\|289681_291007_+	hypothetical protein	NA	NA	NA	NA
WP_096729273.1\|291135_291729_-	hypothetical protein	NA	NA	NA	NA
WP_096694961.1\|292338_293421_+	photosystem II q(b) protein	A0A127KM98	Cyanophage	3.6e-195	91.3
WP_096694962.1\|294188_296777_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
293478:293494	attR	NA	NA	NA	NA
WP_096694963.1\|296939_297332_-	hypothetical protein	NA	NA	NA	NA
WP_096694964.1\|297944_299294_-	hypothetical protein	NA	NA	NA	NA
WP_096694965.1\|299351_299921_-\|transposase	IS607 family transposase	L7RD59	Acanthamoeba_polyphaga_moumouvirus	1.0e-36	43.3
WP_096694966.1\|299950_300478_+	hypothetical protein	NA	NA	NA	NA
WP_096694967.1\|301757_303323_+\|transposase	transposase	A0A0H3UZK2	Geobacillus_virus	1.5e-53	31.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP018255

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CRISPR-Cas detection and classification

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