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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP014922 Staphylococcus aureus strain JH4899 plasmid pJSA01, complete sequence 0 crisprs csa3 0 0 0 0
NZ_AP014921 Staphylococcus aureus strain JH4899 7 crisprs cas3,DEDDh,DinG,csa3,WYL 8 1 9 0

Results visualization

1. NZ_AP014921
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_1 413312-413412 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_2 657544-657636 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_3 820347-820427 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_4 885210-885291 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_5 1153109-1153295 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_6 2201622-2201702 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP014921_7 2325727-2325920 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 2766503-2766531 0 1.0
NZ_AP014921_4 4.1|885234|34|NZ_AP014921|CRISPRCasFinder 885234-885267 34 NZ_AP014921.1 1361411-1361444 0 1.0
NZ_AP014921_4 4.1|885234|34|NZ_AP014921|CRISPRCasFinder 885234-885267 34 NZ_AP014921.1 1449852-1449885 0 1.0
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 358985-359021 0 1.0
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1051349-1051385 0 1.0
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1361370-1361406 0 1.0
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1957292-1957328 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 137269-137305 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 656582-656618 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 778482-778518 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 779452-779488 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 825803-825839 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 1361428-1361464 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 1449832-1449868 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 1958749-1958785 0 1.0
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 1958808-1958844 0 1.0
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 359102-359130 1 0.966
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 1803741-1803769 1 0.966
NZ_AP014921_5 5.1|1153128|37|NZ_AP014921|CRT 1153128-1153164 37 NZ_AP014921.1 1803738-1803774 1 0.973
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1449890-1449926 1 0.973
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1625243-1625279 1 0.973
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 2601207-2601243 1 0.973
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 1078815-1078851 1 0.973
NZ_AP014921_5 5.3|1153240|37|NZ_AP014921|CRT 1153240-1153276 37 NZ_AP014921.1 2492286-2492322 1 0.973
NZ_AP014921_7 7.2|2325806|36|NZ_AP014921|CRT 2325806-2325841 36 NZ_AP014921.1 1803734-1803769 1 0.972
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 885276-885304 2 0.931
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 953620-953648 2 0.931
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 1625190-1625218 2 0.931
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 1968103-1968131 2 0.931
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 NZ_AP014921.1 2517571-2517599 2 0.931
NZ_AP014921_5 5.1|1153128|37|NZ_AP014921|CRT 1153128-1153164 37 NZ_AP014921.1 885271-885307 2 0.946
NZ_AP014921_5 5.1|1153128|37|NZ_AP014921|CRT 1153128-1153164 37 NZ_AP014921.1 1625185-1625221 2 0.946
NZ_AP014921_5 5.1|1153128|37|NZ_AP014921|CRT 1153128-1153164 37 NZ_AP014921.1 1968098-1968134 2 0.946
NZ_AP014921_5 5.1|1153128|37|NZ_AP014921|CRT 1153128-1153164 37 NZ_AP014921.1 2517568-2517604 2 0.946
NZ_AP014921_5 5.1|1153128|37|NZ_AP014921|CRT 1153128-1153164 37 NZ_AP014921.1 2766498-2766534 2 0.946
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 825747-825783 2 0.946
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1153296-1153332 2 0.946
NZ_AP014921_5 5.2|1153184|37|NZ_AP014921|CRT 1153184-1153220 37 NZ_AP014921.1 1957233-1957269 2 0.946
NZ_AP014921_7 7.1|2325750|33|NZ_AP014921|CRT 2325750-2325782 33 NZ_AP014921.1 1361366-1361398 2 0.939
NZ_AP014921_7 7.1|2325750|33|NZ_AP014921|CRT 2325750-2325782 33 NZ_AP014921.1 1449898-1449930 2 0.939
NZ_AP014921_7 7.1|2325750|33|NZ_AP014921|CRT 2325750-2325782 33 NZ_AP014921.1 1957300-1957332 2 0.939
NZ_AP014921_7 7.1|2325750|33|NZ_AP014921|CRT 2325750-2325782 33 NZ_AP014921.1 2601215-2601247 2 0.939
NZ_AP014921_7 7.2|2325806|36|NZ_AP014921|CRT 2325806-2325841 36 NZ_AP014921.1 1625190-1625225 2 0.944
NZ_AP014921_7 7.2|2325806|36|NZ_AP014921|CRT 2325806-2325841 36 NZ_AP014921.1 1968103-1968138 2 0.944
NZ_AP014921_7 7.3|2325865|33|NZ_AP014921|CRT 2325865-2325897 33 NZ_AP014921.1 825755-825787 2 0.939
NZ_AP014921_7 7.3|2325865|33|NZ_AP014921|CRT 2325865-2325897 33 NZ_AP014921.1 1361366-1361398 2 0.939
NZ_AP014921_7 7.3|2325865|33|NZ_AP014921|CRT 2325865-2325897 33 NZ_AP014921.1 1957300-1957332 2 0.939
NZ_AP014921_7 7.3|2325865|33|NZ_AP014921|CRT 2325865-2325897 33 NZ_AP014921.1 2601215-2601247 2 0.939

1. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 2766503-2766531, mismatch: 0, identity: 1.0

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtagaatttcttttcgaaa	Protospacer
*****************************

2. spacer 4.1|885234|34|NZ_AP014921|CRISPRCasFinder matches to position: 1361411-1361444, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 4.1|885234|34|NZ_AP014921|CRISPRCasFinder matches to position: 1449852-1449885, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

4. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 358985-359021, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

5. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1051349-1051385, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

6. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1361370-1361406, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

7. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1957292-1957328, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

8. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 137269-137305, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

9. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 656582-656618, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

10. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 778482-778518, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

11. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 779452-779488, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

12. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 825803-825839, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

13. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 1361428-1361464, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

14. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 1449832-1449868, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

15. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 1958749-1958785, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

16. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 1958808-1958844, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

17. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 359102-359130, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

18. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 1803741-1803769, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

19. spacer 5.1|1153128|37|NZ_AP014921|CRT matches to position: 1803738-1803774, mismatch: 1, identity: 0.973

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacagacaatgcaagttg	Protospacer
*******.*****************************

20. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1449890-1449926, mismatch: 1, identity: 0.973

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agatgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
** **********************************

21. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1625243-1625279, mismatch: 1, identity: 0.973

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttactataatgtgcaagtt	Protospacer
********************** **************

22. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 2601207-2601243, mismatch: 1, identity: 0.973

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcgagtt	Protospacer
********************************.****

23. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 1078815-1078851, mismatch: 1, identity: 0.973

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgtaagtt	Protospacer
*******************************.*****

24. spacer 5.3|1153240|37|NZ_AP014921|CRT matches to position: 2492286-2492322, mismatch: 1, identity: 0.973

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctagagacaatgcaagtt	Protospacer
********************** **************

25. spacer 7.2|2325806|36|NZ_AP014921|CRT matches to position: 1803734-1803769, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

26. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 885276-885304, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

27. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 953620-953648, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

28. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 1625190-1625218, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

29. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 1968103-1968131, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaa	Protospacer
********.***********.********

30. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to position: 2517571-2517599, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

31. spacer 5.1|1153128|37|NZ_AP014921|CRT matches to position: 885271-885307, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttg	Protospacer
*******.****************.************

32. spacer 5.1|1153128|37|NZ_AP014921|CRT matches to position: 1625185-1625221, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttg	Protospacer
*******.****************.************

33. spacer 5.1|1153128|37|NZ_AP014921|CRT matches to position: 1968098-1968134, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaggaaattctacagacaatgcaagttg	Protospacer
*******.***.*************************

34. spacer 5.1|1153128|37|NZ_AP014921|CRT matches to position: 2517568-2517604, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttg	Protospacer
*******.****************.************

35. spacer 5.1|1153128|37|NZ_AP014921|CRT matches to position: 2766498-2766534, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaaacaatgcaagttg	Protospacer
*******.***************.*************

36. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 825747-825783, mismatch: 2, identity: 0.946

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctggcggaaagtcagcttacaataatgtgcaagtt	Protospacer
*****.**.****************************

37. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1153296-1153332, mismatch: 2, identity: 0.946

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctggcggaaagtcagcttacaataatgtgcaagtt	Protospacer
*****.**.****************************

38. spacer 5.2|1153184|37|NZ_AP014921|CRT matches to position: 1957233-1957269, mismatch: 2, identity: 0.946

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacgataatgtgcaggtt	Protospacer
**********************.**********.***

39. spacer 7.1|2325750|33|NZ_AP014921|CRT matches to position: 1361366-1361398, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

40. spacer 7.1|2325750|33|NZ_AP014921|CRT matches to position: 1449898-1449930, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

41. spacer 7.1|2325750|33|NZ_AP014921|CRT matches to position: 1957300-1957332, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

42. spacer 7.1|2325750|33|NZ_AP014921|CRT matches to position: 2601215-2601247, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

43. spacer 7.2|2325806|36|NZ_AP014921|CRT matches to position: 1625190-1625225, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

44. spacer 7.2|2325806|36|NZ_AP014921|CRT matches to position: 1968103-1968138, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

45. spacer 7.3|2325865|33|NZ_AP014921|CRT matches to position: 825755-825787, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgactttccgccagcttctg	Protospacer
*********************.*.*********

46. spacer 7.3|2325865|33|NZ_AP014921|CRT matches to position: 1361366-1361398, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

47. spacer 7.3|2325865|33|NZ_AP014921|CRT matches to position: 1957300-1957332, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

48. spacer 7.3|2325865|33|NZ_AP014921|CRT matches to position: 2601215-2601247, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP014921_3 3.1|820373|29|NZ_AP014921|CRISPRCasFinder 820373-820401 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759

1. spacer 3.1|820373|29|NZ_AP014921|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtaggatttcttctaagtg	Protospacer
**************.*******.* .. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 382362 : 398771 23 Staphylococcus_phage(94.12%) integrase,terminase,coat attL 384538:384552|attR 399640:399654
DBSCAN-SWA_2 752996 : 765937 15 Staphylococcus_phage(30.0%) transposase NA
DBSCAN-SWA_3 777363 : 791981 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 842615 : 860781 23 Staphylococcus_phage(70.59%) integrase,terminase,coat attL 842975:842990|attR 849044:849059
DBSCAN-SWA_5 1052862 : 1061335 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1596812 : 1605124 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_7 1674255 : 1683298 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_8 1808816 : 1886401 70 Staphylococcus_phage(94.55%) transposase,tRNA,protease NA
DBSCAN-SWA_9 1982735 : 2067792 107 Staphylococcus_phage(90.79%) head,protease,holin,portal,integrase,terminase,tail,capsid attL 2041237:2041254|attR 2065776:2065793
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage