CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP017652	Streptococcus sp. NPS 308	2 crisprs	DEDDh,cas3,DinG	0	4	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP017652_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017652_1

531629-531798

Orphan

Consensus_repeat	Method
TTGAAGTTTTATCGGTCATAATTTTGGAGACTACAAAAAC	PILER-CR
GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_AP017652_1

>merge|NZ_AP017652|1|531629-531798|PILER-CR,CRISPRCasFinder
TTGAGGTTTTATCGGTCATAATTTTGGAGACTACAAAAACGACCTTGGAGACCATCAGACGTATTGATAAGTTTTATCGGTCATAATTTTGGAGACTACAAAAACTTTCTGCGTTGGATGCGCCTTGGCGTTGTAGTTTTATCGGTCATAATTTTGGAGACTACAAAAAC

>NZ_AP017652|1|1|531629-531798|PILER-CR
TTGAGGTTTTATCGGTCATAATTTTGGAGACTACAAAAAC	GACCTTGGAGACCATCAGACGTATT
GATAAGTTTTATCGGTCATAATTTTGGAGACTACAAAAAC	TTTCTGCGTTGGATGCGCCTTGGCG
TTGTAGTTTTATCGGTCATAATTTTGGAGACTACAAAAAC

>NZ_AP017652|1|1|531634-531798|CRISPRCasFinder
GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC	GACCTTGGAGACCATCAGACGTATTGATAA
GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC	TTTCTGCGTTGGATGCGCCTTGGCGTTGTA
GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017652.1\|WP_096406361.1\|537371_539708_+\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_AP017652.1\|WP_000240126.1\|530037_530730_+\|phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184517
NZ_AP017652.1\|WP_096406356.1\|535754_536447_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_AP017652.1\|WP_096406359.1\|536489_537239_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|223282
NZ_AP017652.1\|WP_001018251.1\|531021_531291_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_AP017652.1\|WP_096406366.1\|540473_541271_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_AP017652.1\|WP_096406341.1\|514684_522763_+\|G5-domain-containing-protein	unknown	unknown	gnl\|CDD\|369436
NZ_AP017652.1\|WP_096406331.1\|509480_510272_+\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|225185
NZ_AP017652.1\|WP_096406354.1\|534763_535774_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238568
NZ_AP017652.1\|WP_096406348.1\|532940_533987_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_AP017652.1\|WP_096406351.1\|533988_534744_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_AP017652.1\|WP_096406369.1\|541287_542391_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_AP017652.1\|WP_096406333.1\|510551_511346_+\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377456
NZ_AP017652.1\|WP_096406343.1\|523011_523392_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017652.1\|WP_096406336.1\|511597_514390_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_AP017652.1\|WP_096406346.1\|523625_529193_+\|G5-domain-containing-protein	unknown	unknown	gnl\|CDD\|369436
NZ_AP017652.1\|WP_000531728.1\|532096_532708_+\|CadD-family-cadmium-resistance-transporter	unknown	unknown	gnl\|CDD\|281580
NZ_AP017652.1\|WP_044020432.1\|529344_529725_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017652.1\|WP_096406364.1\|539809_540487_+\|tRNA-(adenine-N(1))-methyltransferase	unknown	unknown	gnl\|CDD\|225258
NZ_AP017652.1\|WP_000028988.1\|510280_510535_+\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377456

Protein	Function_ID	Function_description	E-value
NZ_AP017652.1\|WP_096406361.1\|537371_539708_+\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_AP017652.1\|WP_000240126.1\|530037_530730_+\|phosphoglycerate-mutase	gnl\|CDD\|184517	PRK14117, gpmA, phosphoglyceromutase; Provisional.	1.2539e-167
NZ_AP017652.1\|WP_096406356.1\|535754_536447_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	9.281e-21
NZ_AP017652.1\|WP_096406359.1\|536489_537239_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|223282	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism].	2.49014e-44
NZ_AP017652.1\|WP_001018251.1\|531021_531291_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.4531e-50
NZ_AP017652.1\|WP_096406366.1\|540473_541271_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	2.85556e-88
NZ_AP017652.1\|WP_096406341.1\|514684_522763_+\|G5-domain-containing-protein	gnl\|CDD\|369436	pfam07580, Peptidase_M26_C, M26 IgA1-specific Metallo-endopeptidase C-terminal region. These peptidases, which cleave mammalian IgA, are found in Gram-positive bacteria. Often found associated with pfam00746, they may be attached to the cell wall.	0
NZ_AP017652.1\|WP_096406331.1\|509480_510272_+\|RNA-binding-protein	gnl\|CDD\|225185	COG2302, COG2302, Uncharacterized conserved protein, contains S4-like domain [Function unknown].	6.71093e-110
NZ_AP017652.1\|WP_096406354.1\|534763_535774_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238568	cd01148, TroA_a, Metal binding protein TroA_a. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	5.30475e-45
NZ_AP017652.1\|WP_096406348.1\|532940_533987_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	7.5717e-73
NZ_AP017652.1\|WP_096406351.1\|533988_534744_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	3.13158e-97
NZ_AP017652.1\|WP_096406369.1\|541287_542391_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	4.12934e-49
NZ_AP017652.1\|WP_096406333.1\|510551_511346_+\|DivIVA-domain-containing-protein	gnl\|CDD\|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	1.51952e-35
NZ_AP017652.1\|WP_096406336.1\|511597_514390_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_AP017652.1\|WP_096406346.1\|523625_529193_+\|G5-domain-containing-protein	gnl\|CDD\|369436	pfam07580, Peptidase_M26_C, M26 IgA1-specific Metallo-endopeptidase C-terminal region. These peptidases, which cleave mammalian IgA, are found in Gram-positive bacteria. Often found associated with pfam00746, they may be attached to the cell wall.	0
NZ_AP017652.1\|WP_000531728.1\|532096_532708_+\|CadD-family-cadmium-resistance-transporter	gnl\|CDD\|281580	pfam03596, Cad, Cadmium resistance transporter.	1.9772e-87
NZ_AP017652.1\|WP_096406364.1\|539809_540487_+\|tRNA-(adenine-N(1))-methyltransferase	gnl\|CDD\|225258	COG2384, COG2384, Predicted SAM-dependent methyltransferase [General function prediction only].	9.19833e-102
NZ_AP017652.1\|WP_000028988.1\|510280_510535_+\|DivIVA-domain-containing-protein	gnl\|CDD\|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	6.08213e-13

>NZ_AP017652.1|WP_001018251.1|531021_531291_+|30S-ribosomal-protein-S15
MAISKEKKNEIIAQYARHEGDTGSVEVQVAVLTWEINHLNEHIKQHKKDHATYRGLMKKIGRRRNLLAYLRKNDVNRYRELINSLGLRR
>NZ_AP017652.1|WP_000240126.1|530037_530730_+|phosphoglycerate-mutase
MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPNMDRDDEHSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKRLSDDEIMDVEIPNFPPLVFEFDEKLNVVSEYYLGK
>NZ_AP017652.1|WP_044020432.1|529344_529725_+|hypothetical-protein
MERDRLVRLNWRLGMLAGITLLLGPVLRFLLSYTGAIIYKDPSKMLVVTVAFSLLLTFFKILMIALGTFMLIYFEEDQQLRMLPSILFIIGGVLGFLSATEWIGGFLIIKGAVTFSKFLKEVRGLV
>NZ_AP017652.1|WP_096406346.1|523625_529193_+|G5-domain-containing-protein
MKKIFGEKQHRFSLRKLAIGLVSASISSLFFVSIASSGTVFAQENVAVHYKYVTDTELSGQEKDLIVKDIPKIAEDSESTYYLVYRMDEKAQLGQLPNTGGQNSLTSVLTGGTLASIGLLIFVVSKKKGKKKALLNVILVTGMGSGLVSSVQAIENQLLLQYNQEYQLSQGDSLPLPRTLSGYTYLGYIKQDKDSSLQETAARDQKFDYTVQPHFQTNEGGQKVGDEQKNPSPTSPADKPIPSQDSSNQKPSGIASVDPQDEVLAGRVNKPELLYKDQEIVTKLDFSEVVQENPELAEGTIRVKQEGHVGKKVEVVRIFTVENQEISREVLSTKVEEALPRIVEKGTKKAVAASEAPQSARKGEPETQAPLPEYNGNQAGAIVAPETAEKPEYTGTQAGAVVEPEQVSPLPEYQGTQAGAIVEPEQVEPEVGGVQSGALVEPETAEKPEYTGEQSGAIVEPEQVPPTPEYTGTQAGAIVAPETAEKPEYTDTQSGAIVEPEQVAPQAEYQGTQAGAIVEPEIQSSLPEYKGTQSGAIVEPEQIAPLPEYTGNTEQVKPETPTEKPKEKDPEKTLELRNVSDLELYSQINGTYKQHVSLDSVPKNTETYFVKVKSSSFKDVYLPVSSITAETKDGQTVYKITAKAEKLQQELENKYADNFTFYLAKKATEETTTFTSFSNLVNAIKQNLSGTYHLAASLNANEVELGPDERSYIKGTFTGQLIGEKDGKQYAIYNLKKPLFETLSGAKVEKLSLKNVSISGKDDIGSLAYEAQNGTKIQQVHVDGVLAGERGIGGLLAKADQSSITESSFKGRIINTYETTAAYNIGGLVGHLTGNRALLTKSKATVAISSNTNSSDQTVGGLAGLVDQDAQIQHSYAEGDINNVKHFGRVAGVAGNLWDRTSGDVRYAGSLTNVLSDVNVTNGNAITGYHYNGMKVKDTFSSKANRVYNVTLVKDEVVSKESFEERGTMLDASQIASKKAAINPLTLPTVEPLSTSGKKDSDFSKVAHYQSKRALAYKNIEKLLPFYNKATIVKYGNLVNENSLLYQKELLSAVMMKDDQVITDIVSNKKTANKLLLHYKDHSSEKLNLKYQADFAKLAEYSLGNTGLLYTPNQFLYDQSSIIKQVLPDLQKVDYHSEAIRKTLGISPNVKQTELYLEDQFAKTKQQLEDSLKKLLSADAGLVGDNPVTKGYLVDKIKHNKEALLLGLTYLERWYNFSYGQVNVKDLVLYHLDFFGKGNASPLDTLIELGKSGFNNLLAKNNVDTYGISLASHHGTKDLFSTLEHYRKVFLPDTSTNDWFKSETKAYIVEEKSTIEEVKTKQGLAGSKYSIGVYDRITSATWKYRNMVLPLLTLPERSVFVISTMSSLGFGAYDRYRNSEHKAGKALNDFVEENARETAKRQRDHYDYWYRILDNEGREKLYRTILLYDAYKFGDDTTSGKATVEAKFDSANRAMKNFFGPVGNKVVHNQHGAYATGDGVYYMSYRMLDKDGAITYTHEMTHDSDQDIYLGGHGRRSGLGPEFFAKGLLQAPDQPSDATLTINSILKHSTSDSTEDSRLQVLDPTERFQNAADLQNYVHNMFDLIYMLEYLEGQSIVKKLNVYQKMAALRKIENKYVKDPADGNEVYATNVVKELTAEEAQKLTSFESLIDHNILSAREYQSGDYERNGYYTIKLFAPIYSALSSEKGTPGDLMGRRIAYELLAAKGFKDGMVPYISNQYEEIAKQKGKTINLYGKERGLVTDDLVLDKVFEGRYASWAAFKKAMYKERVDQFENLKQVTFKDPTQSWMSNATKTIQRVKELQELMDQAVLQDAVAPRWSNYDPEIDSAVHKLKRAIFKAYLDQTNDFRTSIFKK
>NZ_AP017652.1|WP_096406343.1|523011_523392_+|hypothetical-protein
MKTNTLARVNAIFGLISGIVLLLAPVVMFMIAVGAAAATEDSDATVGLLTIFSIILSLVKIAILVLGIVAIVYYKDDERVTPAPSVLFIVGGAVGLIPFLGWVGGILTIIGGSLYFGLLKKFDVQE
>NZ_AP017652.1|WP_096406341.1|514684_522763_+|G5-domain-containing-protein
MKHQFYGEKRQRFSFRKLSVGLVSATIGSFFLSGQITGDLTSVKAAEIQSQQSAQVKYHYVVESELTEAEKSALIREIPKYVEDASETYYLVYRPTTQGDSSGVLPKTGHSGLWESTFTAMGLALLVLVVVRGRNGKRYLSSILLVTGMGSMLLSPTVLAVTNIELAAYNQSLNLGLGDALPAPLKIDGYDYIGYLKNEEQNDSHLAHSAQKENLTLDLEKEKGSELKPSETNPNTKEIVSDKEDGLTEQDREAIATKERELARLGAVHELPELKISEQKSVQDLPYQTQYQYSDELAQGQSKVIQSGVRGQRTVVTRHYRENQEIVKSEMISDQVTLEPVSEIILVGTAPTNSIPKETPVHEVPELTEYGTTPETAPVHEVPELAEYGTNPETAPVHEISELTEYGTNPETAPVHEVPELTEYGTSPETTPVHEAPELTEYGTSPETTPVRETPELTEYGTSPETSPVHEVPELAEYGTSPETTLVQEIPELTEYGTTPDTAPIHETSELELTTNDEVRIEKIDFSIDEQYTDEIPEGSRQIATPGVQGERTIKTRVYSSNGQEVDRQELSNEETLAPVTQIVKVGTAKPSVVPNDAPKSETLPEYPLTYTDETRVEKIAFNIEEQYTDELVRDARQIATPGVQGERTIKTRVYSSNGQEIDRQELSNEETLAPVTQIVKVGTAKPSVVPNDAPKSETLPEYPLTYTDETRVEKIAFNIEEQYTDELVRDARQIATPGVQGERTIKTRVYSSNGQEIDRQELSNEETLAPVTQIVKVGTAKPNMVPNDPPQADALPEYPLTYTDETRVEKINFNIREEESDELVQDARQIATPGVQGERTIKTRVYSSNGQEVDRQELSNEETLAPVTQIVKVGTAKPSVVPNDAPKSETLPEYPLTYTDETRVEKIAFNIEEQYTDELVRDARQIATPGVQGERTIKTRVYSSNGQEIDRQELSNEETLAPVTQIVKVGTAKPNMVPNDPPQADALPEYPLTYTDETRVEKINFNIREEESDELVQDARQIATPGVQGERTIKTRVYSSNGQEVDRQELSNEETLAPVTQIVKVGTAKSTMVPNDPPKAEALPEYPLTYTDETRVEKINFSIREEETDELVQDARQIATPGVQGERTIKTRVYSSNGQEVDRQELSNEETLAPVTQIVKVGTAKPSMVPNEAPKADALEEFDLISLHNLLAEADQIKAQARYFNDSQSHQANYDAALTAGQAILSQSQASQAEVNQLVEQINQAKAQLSGLEVVKTALQTEYDLNPRVKTSVKYKNADSEKQTAYTDELTKAEGVLNNQTATQVQVNQVLASLTAAKEALNGVPKVKPTVSILSLTENADDKSVTVQYRLEDQTKSFRSATAELYQGDQLVRTLPITNFAGSLKIGDLDYYTGYTLKTKLTYELDNGSFTEFETDSRNFDLEYKKIAFRDIDSVEFYHKENDQYKRFVSMSSMPTDLSTYFVKIKSSESKEILLPVHSISEAEKDGKAVYKVNVTLPELVQESETGYKSGHDFYISKAVPSQQNVYTSFAGLVDAMKRNMAGNYVLGADLDASEVNLAPADYVYLKGNFTGSLTGSHNGKQYAIYNLVKPLFENLKSGSTISNIDFKDVNIVGTYDSAALARNAENAQITDVSVQGRVSVVGNASNVAGLVVNGTNTKITNSSFTGTILSNSQHIKAYNVGGLVASLKGGESLLSQSKADVTIISGARSNEQRIGGLVGRLENNARITKSYVTGKLYNSTTNGQIGGVVGSNYFNGLVDNVISNVSGTNVYSISGDQGYKNDRITQAYKVAKSETLKNDQFVTSTITQEEMEEKLTAMDITTSLDDTNLNMRFVDYGQVNNAQFDRGYSYANMEKLLPFYNKETIVSFANKIPKEHKLNKEYLLDVVPMKGDQVITDIHGNKTAINRLMLHYMDNTIDYLEISYQGDFVNRGIAEYSIKGLDLLYTPEAFVSDYTSILNQVLPELNKVVLDSPAMRTALGVAADTSLDELYLDTAFTQVKSKLSTELRKVLAMDKAINTEGEVVKDYLVKKILADKEAFLLGLTYLNRWYNINYDNFNVKDLSAYKLDFYGKNDVSVLDTIIALGKSGLENLKAKNNYTAYDNSLSEATGKRGLFNYLEGYRQLFLPYKTNNEWLKTNTKAYIVEAKSDVAEARQLQDAAEGKSKYSVGVYDKITADNWEHKGMLLPLLTMTEKGVYAISNMSTLSMGAYDRYRLDANNRVRTDAELAEYVEDRVRKTAEYQRDHYDFWYKILSPESKDKLFRSVLVYDGFSLIDKNGQKYWAPANDKKSLAMQEFFGPAGKWYPSKGYNAYATGSVTHFDAAKLLEDYGNSVYTHEMTHNSDGAIYFEGYGRREGLGAELYARGLLQSSPSADEPTITLNTLFKVDKDSKTRMHTYNFKERVQNEADLQHYVHGMFDMIYTLDYLEGTSMLKQSDAAKLQWFRKMENYYITDKYGKETHAGNQTRSFTAEEIKQLKTFNSLIENDVITRRENKDSGNYGRNGYLSLSLFSPIYSALSNPNGAPGDVMFRRTAYELLAAKGYHEGFVPYVSGQYSQEAFDEGMKTWDGWSGRDVGLVTDQKVLENVFKGEYDSWVAFKKAMYQERIDKLTKLKPITIEYELRNPNSTKKVTIRSYADMQRLMDAAVAEDVRNITNATSRVESSWVNLLKKKIYNAYLRETDDFRQSIFEK
>NZ_AP017652.1|WP_096406336.1|511597_514390_+|isoleucine--tRNA-ligase
MKLKDTLNLGKTDFPMRAGLPTKEPVWQKEWEEAKLYQRRQELNQGKPHFTLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPYIPGWDTHGLPIEQVLAKQGVKRKEMDLVEYLKLCREYALSQVDKQREDFKCLGVSGDWENPYVTLTPDYEAAQIRVFGEMAKKGYIYRGAKPVYWSWSSESALAEAEIEYHDLVSTSLYYANKVKDGKGVLDTDTYIVVWTTTPFTITASRGLTVGADIDYVVVQPAGETRKFVVASELLASLSEKFDWTDVQVLATYRGQELNHIVTVHPWDTAVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGVANGLEVAVTVNERGIMMANAGSDFEGQFYDKVVPTVIEKLGNLLLAQEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTPIMTAETIEHVAQLFEEHGSIIWWERDAKDLLPEGFSHPGSPNGEFKKETDIMDVWFDSGSSWNGVVVNRPELKYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDVEKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYLEFEAEDFVQLSELPEAQTFANQEEILDTWAAFMDFRGQAQKALEEARNAKVIGKSLEAHLTVYPNEVVKTLLGAVNSNVAQLLIVSELTIAEGTAPESAVSFEDVAFTVERATGEVCDRCRRIDPTTAERSYHAVICDHCASIVEENFADAVAEGFEAK
>NZ_AP017652.1|WP_096406333.1|510551_511346_+|DivIVA-domain-containing-protein
MPITSLEIKDKTFGTRFRGFDPEEVDEFLDIVVRDYEDLVRSNHEKETRIKNLEERLSYFDEMKDSLSQSVLIAQDTAERVKQAAQERSNNIIQQAEQDAQRLLEEAKYKANEILRQATDNAKKVAVETEELKNKSRVFHQRLKSTIESQLAIVESSDWEDILRPTATYLQTSDEAFKEVVGEVLGESVSLQPEEEPIDMTRQFTPEEVAELQARIEAGNKELAEFEAQQNQHTEELVQHEESVEVEATAATEEDANKESVLIL
>NZ_AP017652.1|WP_000028988.1|510280_510535_+|DivIVA-domain-containing-protein
MSITPQEISDKAFSRTFRGYNQEEVDLFLDKIYFELEEMIRYKDETELYIKKLEERLSYYTNDIPKRTVTSEQEPEAINDSIFY
>NZ_AP017652.1|WP_096406331.1|509480_510272_+|RNA-binding-protein
MTANRAIYQHFSHEDIPFIDKGLEWIKRVEDTYAPVLSPFINPHQEQILRVLAGTYGLGCQSSGDFFPTESVRVLLYPDYFEPEISDFEMTLLEICYPSKFEQLSHGKILGTIINQLGIDRKLFGDILVDEKRAQIFVNRDFIPLFQDGIRKIGRLPVSLEERPFTDRIKSKIDYREREILVSSFRLDALLSSALKLSRNQTSQLIEKKSVQVNYHVVEKSDYQVAVGDLISVRKFGRLKVVKDNGQTKKDKKKLTVRLLLSK
>NZ_AP017652.1|WP_000531728.1|532096_532708_+|CadD-family-cadmium-resistance-transporter
MGQTIISAIGVYISTSIDYLIILIILFAQLSQNKQKWHIYAGQYLGTGLLVGASLVAAYVVNFVPEEWMVGLLGLIPIYLGIRFAIVGEGEEEEEEIIERLEQSKANQLFWTVTLLTIASGGDNLGIYIPYFASLDWSQTLVALLVFVIGIIIFCEISRMLSSIPLIFETIEKYERIIVPIVFILLGLYIMYENGTIETFLIV
>NZ_AP017652.1|WP_096406348.1|532940_533987_+|iron-ABC-transporter-permease
MLSKFSGSRQDLQFVLLLVILLGILGISLFLAVSMGSVAIDLGDTYRIILSRLGFPLEIGEVSKSTLAIVWNMRFPRVLLGLIVGVGLSMCGSVMQSTVNNPIAEPYVLGISAGATLGATLSIIIGLKLVISLGAFLGAILATIAVLIIASMQGRMTTSSLILSGTVVNALFLAFSNFIISVGANADSVMTIKFWTMGSLAGTTWSDLVLPTIVVGLAFLFFTTQYRVFNAMMMGDEAALTLGIPLRFYWYLYVTVVAVLTAVLVATCGIIGFVGLITPHLARGLVGTNYKRLFPVATLLGALFVIWADVLSRIIIPNAELPIGIFTALVGAPFFIYIVGGRRREVRA
>NZ_AP017652.1|WP_096406351.1|533988_534744_+|ABC-transporter-ATP-binding-protein
MDLICQDVHFGIGEKKILKGVSLKVEGHQFHTILGPNGSGKTSLLKLLYRQEKADKGLISLDGKPLEHWSLKETAKQMAVVTQFNQLQFDCTVEEIVLLGRTPHLSFLQKEKERDYALVQDALVKVDMLEKKTRLYSSLSGGEKQRVLLARALAQEPTLLLLDEPTNHLDIKYQLDLLAIVKNLKVNVLAVLHDIQLACRYSNYLYLMKEGEILYQGTPKETITPESLQTVYGVQSQVTWTEDQQAMIHYL
>NZ_AP017652.1|WP_096406354.1|534763_535774_+|ABC-transporter-substrate-binding-protein
MKKTLSILLVTVATLTMAACGNTTTEKATTQSSTETSQKASTETTYPLTVKTYDAKGNEVEQVFDKSPEKVITNNLSTTEILLELGLKDKIAGMLNPDNAVTDKYKDAIATIPQIGDKKTVSQETVLSYEPDAVMGRNMMFSEKSLGTVSTWNENKIPVYTQKASLSTIQQDLGNIVEDVKNLGMIFNVQDKANEYAVQLQAKIDAVKKANPASQGEKKKALIMVAYNDETFGAYKSALQESLLNQLGYTNVATGTSGLTLENLVSMDPELIIYVTSDRNKKLDANAVELMKANEVLENVPAIKNQKIMTISYDELMDYGPAVIDSLEKINDFINK
>NZ_AP017652.1|WP_096406356.1|535754_536447_+|alpha/beta-hydrolase
MTLSINNEFDWEGIQVKVSLPSTYDPNQIYPAILLNDGNLDFLSSLSESVILVGLTSKNRLDDYTPWKAPALRDGAPDFGGQANAYHSHLFGGLLDKLQSLYRLDKNRLAYGGYSLGGLTAVYSLFHFDKVSCIFSICGSFWYPDFVTYCKEEKVRNLDCLLYLQNGQTEGAHHTNRLAQAPVYAEQIHTSLQKHYPAGQFVFDSYGHHEQVVERFLVFSSWLAQEWEIA
>NZ_AP017652.1|WP_096406359.1|536489_537239_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MFYTYLRGLVMLILWSINGNAHYHNTDKIPSKDENYILVAPHRTWWDPVYMAFATKPKQFIFMAKKELFNNRIFGWWIRMCGAFPIDRENPSASAIKYPINVLKKSDRSLIMFPSGSRHSTDVKGGVALIAKMAKVRIMPVTYTGPMTLKGLVSRERVDMNFGNPIDISDIKKMNDEGIEMVADRIQAEFQRLDEETKQWHNDKKPNPLWWFVRIPALFLAVIVGILTIIFTFIASFIWNPDKKRESLG
>NZ_AP017652.1|WP_096406361.1|537371_539708_+|HAD-IC-family-P-type-ATPase
MDKNKIMGLTQREVKERQAQGLVNDFTASASTSTWQIIKRNVFTLFNALNFVIALALAFVQAWSNLVFFAVICFNAFSGIVTELRAKHMVDKLNLMTKEKVKTIREGQEIAINPEELVLGDVIRLSAGEQIPSDARVLEGFAEVNEAMLTGESDLVQKEVDALLLSGSFLASGAVLAQVHHVGAENYASKLMLEAKTVKPINSRIMKSLDKLAGFTGKIIIPFGLALLLEALILKGLPLKSSVVNTSTALLGMLPKGIALLTITSLLTAVIKLGLKKVLVQEMYSVETLARVDILCLDKTGTITQGKMQVEALLPLTEEYGEHAIASILTSYMAHSEDKNPTAQAIRQRFQGKVAYPMLSNLPFSSDRKWGAMELEGLGTVFLGAPEMLLDSEVPEAREALERGSRVLVLALSQEKLDHHKPHKPSDIQALALLEILDPIREGAAETLDYLRSQEVGLKIISGDNPVTVSSIAQKAGFADYQSYVDCSKITDEELMAMAEATAIFGRVSPHQKKLLIQTLKKAGHTTAMTGDGVNDILALREADCSIVMAEGDPATRQIANLVLLNSDFNDVPEILFEGRRVVNNIAHIAPIFLIKTIYSFLLAVICIASALLGRSEWILIFPFIPIQITMIDQFVEGFPPFVLTFERNIKPVEPNFLRRSMLRALPSALMVVFSVLFVKIFGASQGWSELEISTLLYYLLGSIGFLSVFRACMPFTLWRVLLIVWSVGGFLATALFPKIQKLLEISTLTGQTFPVYLVMMAVFTVIFILTSRYQARK
>NZ_AP017652.1|WP_096406364.1|539809_540487_+|tRNA-(adenine-N(1))-methyltransferase
MISKRLELVASFVTQGAILLDVGSDHAYLPIELVERGQIERAIAGEVVEGPYQSAVKNVEAHGLKKKIQVRLANGLAAFEEADQVSVITIAGMGGRLIARILEEGLDKLANVERLILQPNNREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAGEMYLSASDLRFGPFLSKEVSPVFVQKWQKEANKLEFALDQIPEKNREERQVLAHKIQAIKEVLHVSK
>NZ_AP017652.1|WP_096406366.1|540473_541271_+|Nif3-like-dinuclear-metal-center-hexameric-protein
MLASEVIKRYEDFCPQEFSMEGDSRGLQIGTLDKDIQRVMVALDIREETVAEAIEKGVDLIIVKHAPIFRPIKDLVASRPQNQIYIDLIKHDIAVYVSHTNIDIVENGLNDWFCQMLGIEETTYLQETGPERGIGRIGDIQPQTYEEFASHVKQVFDLDNLRMVHYQESDLKKEISRVAICGGSGQSFYPDALEKGADVYITGDIYYHTAQDMLSDGLLALDPGHYIEILFVEKIADLLAQWKAEKDWTIDIIPSQASTNPFHHI
>NZ_AP017652.1|WP_096406369.1|541287_542391_+|FAD-binding-oxidoreductase
MKKVAIIGAGIVGATAAYYLFKEADLEVTVFDHGQGQATKAAAGIISPWFSKRRNKAWYKMARLGADFYVGLLADLEKSGQEIDFYQRSGVFLLKKDESKLEELYQLALQRREVSPLIGQLAILGQASANELFPCLQGFDRLLYASGGARVDGQLLVTRLLEASQVKLVKEKVSLTPVSSGYQIGEEVFDQVVLATGAWLGDILEPLGYEVDVRPQKGQLRDYQLTQDMESYPVVMPEGEWDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEDAALPHYPALAEATIRGERVGVRAYTSDFSPFFGEVPDLAGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPVNYPIANYVKQVKSE

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Crispr_ID: NZ_AP017652_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017652_2

604638-604710

Orphan

Consensus_repeat	Method
GAGTCTAGAAATGAGAAAGCGAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017652_2

>merge|NZ_AP017652|2|604638-604710|CRISPRCasFinder
GAGTCTAGAAATGAGAAAGCGAGGAAGGTCCTGTAGACCTTTTTACCCTGAGTCTAGAAACGAGAAAGCGAGG

>NZ_AP017652|2|2|604638-604710|CRISPRCasFinder
GAGTCTAGAAATGAGAAAGCGAGG	AAGGTCCTGTAGACCTTTTTACCCT
GAGTCTAGAAACGAGAAAGCGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017652.1\|WP_172842382.1\|611209_617056_+\|G5-domain-containing-protein	unknown	unknown	gnl\|CDD\|369436
NZ_AP017652.1\|WP_096406489.1\|600402_600813_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236088
NZ_AP017652.1\|WP_096406523.1\|618934_620326_+\|Ltp-family-lipoprotein	unknown	unknown	gnl\|CDD\|227588
NZ_AP017652.1\|WP_096406505.1\|605623_606334_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NZ_AP017652.1\|WP_096406502.1\|604908_605460_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_AP017652.1\|WP_096406497.1\|602278_603739_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NZ_AP017652.1\|WP_096406515.1\|608837_610529_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_AP017652.1\|WP_096406495.1\|601673_602162_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017652.1\|WP_096406520.1\|617122_618844_+\|aminodeoxychorismate-synthase-component-I	unknown	unknown	gnl\|CDD\|273133
NZ_AP017652.1\|WP_096406481.1\|595984_596488_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_AP017652.1\|WP_001107501.1\|601011_601221_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_AP017652.1\|WP_096406484.1\|596568_598314_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|224475
NZ_AP017652.1\|WP_096406500.1\|603735_604560_+\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_AP017652.1\|WP_096406492.1\|601210_601684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017652.1\|WP_000659498.1\|610643_611207_+\|TIGR01440-family-protein	unknown	unknown	gnl\|CDD\|237472
NZ_AP017652.1\|WP_096406487.1\|598377_598860_+\|transcription-elongation-factor-GreA	unknown	unknown	gnl\|CDD\|234693
NZ_AP017652.1\|WP_096406513.1\|608103_608841_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|227095
NZ_AP017652.1\|WP_172842381.1\|598938_600303_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_AP017652.1\|WP_096406507.1\|606347_606911_+\|redoxin-family-protein	unknown	unknown	gnl\|CDD\|184456
NZ_AP017652.1\|WP_096406510.1\|606920_608033_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456

Protein	Function_ID	Function_description	E-value
NZ_AP017652.1\|WP_172842382.1\|611209_617056_+\|G5-domain-containing-protein	gnl\|CDD\|369436	pfam07580, Peptidase_M26_C, M26 IgA1-specific Metallo-endopeptidase C-terminal region. These peptidases, which cleave mammalian IgA, are found in Gram-positive bacteria. Often found associated with pfam00746, they may be attached to the cell wall.	0
NZ_AP017652.1\|WP_096406489.1\|600402_600813_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|236088	PRK07757, PRK07757, N-acetyltransferase.	5.04281e-10
NZ_AP017652.1\|WP_096406523.1\|618934_620326_+\|Ltp-family-lipoprotein	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	2.74874e-23
NZ_AP017652.1\|WP_096406505.1\|605623_606334_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	4.1288e-44
NZ_AP017652.1\|WP_096406502.1\|604908_605460_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.44878e-39
NZ_AP017652.1\|WP_096406497.1\|602278_603739_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_AP017652.1\|WP_096406515.1\|608837_610529_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.7394e-100
NZ_AP017652.1\|WP_096406520.1\|617122_618844_+\|aminodeoxychorismate-synthase-component-I	gnl\|CDD\|273133	TIGR00553, Aminodeoxychorismate_synthase_component_1, aminodeoxychorismate synthase, component I, bacterial clade. Members of this family, aminodeoxychorismate synthase, component I (PabB), were designated para-aminobenzoate synthase component I until it was recognized that PabC, a lyase, completes the pathway of PABA synthesis. This family is closely related to anthranilate synthase component I (trpE), and both act on chorismate. The clade of PabB enzymes represented by this model includes sequences from Gram-positive and alpha and gamma Proteobacteria as well as Chlorobium, Nostoc, Fusobacterium and Arabidopsis. A closely related clade of fungal PabB enzymes is identified by TIGR01823, while another bacterial clade of potential PabB enzymes is more closely related to TrpE (TIGR01824). [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	9.4734e-179
NZ_AP017652.1\|WP_096406481.1\|595984_596488_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	1.20987e-07
NZ_AP017652.1\|WP_001107501.1\|601011_601221_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	3.00144e-28
NZ_AP017652.1\|WP_096406484.1\|596568_598314_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|224475	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism].	1.62459e-113
NZ_AP017652.1\|WP_096406500.1\|603735_604560_+\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NZ_AP017652.1\|WP_000659498.1\|610643_611207_+\|TIGR01440-family-protein	gnl\|CDD\|237472	PRK13690, PRK13690, hypothetical protein; Provisional.	6.7768e-110
NZ_AP017652.1\|WP_096406487.1\|598377_598860_+\|transcription-elongation-factor-GreA	gnl\|CDD\|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	1.06883e-70
NZ_AP017652.1\|WP_096406513.1\|608103_608841_+\|response-regulator-transcription-factor	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.84701e-86
NZ_AP017652.1\|WP_172842381.1\|598938_600303_+\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	3.28159e-168
NZ_AP017652.1\|WP_096406507.1\|606347_606911_+\|redoxin-family-protein	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	1.92302e-37
NZ_AP017652.1\|WP_096406510.1\|606920_608033_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	1.10641e-160

>NZ_AP017652.1|WP_096406500.1|603735_604560_+|ammonia-dependent-NAD(+)-synthetase
MSLQETIIQQLEVKPVIDAQEEIRRSIDFLKKYLKKHPFLKTFVLGISGGQDSTLAGRLAQLAMEEMRAETGDDSYQFIAVRLPYGVQADEADAQKALAFIQPDVSLVVNIKESADAMTAAVEAAGSPVSDFNKGNIKARSRMIAQYALAGAHSGAVIGTDHAAENITGFFTKFGDGGADILPLYRLNKRQGKQLLKELGADPALYEKIPTADLEEEKPGIADEVALGVTYNEIDDYLEGKTISPESQATIENWWHKGQHKRHLPITVFDDFWE
>NZ_AP017652.1|WP_096406497.1|602278_603739_+|nicotinate-phosphoribosyltransferase
MYPDDSLTLHTDLYQINMMQVYFDQGIHNKKAVFEVYFRQQPFNNGYAVFAGLERIVHYLEDLRFSDSDIAYLETLGYHGEFLDYLRNLKLELTVRSAQEGDLVFANEPIVQVEGPLAQCQLVETALLNIVNFQTLIATKAARIRSVIEDEPLMEFGTRRAQEMDAAIWGTRAAVIGGANGTSNVRAGKLFGIPVLGTHAHALVQVYGNDYEAFKAYASTHRDCVFLVDTYDTLRIGVPAAIQVARELGEKINFKGVRIDSGDIAYISKKVRQQLDEAGYPDAKIYASNDLDENTILNLKMQHAKIDVWGVGTKLITAYDQPALGAVYKIVAIEDETGKMRNTIKLSSNAEKVSTPGKKQVWRITSREKGKSEGDYITYDGVDVSDLTEIKMFHPTYTYIKKTVRNFDAVPLLVDIFKEGTLVYNLPSLTEIQSYARKEFDKLWDEYKRVLNPQHYPVDLARDIWQDKMDLIDKMRKEALGEGEEE
>NZ_AP017652.1|WP_096406495.1|601673_602162_+|hypothetical-protein
MKNRFFYYQLLDEREEQLMNKAGAESFYISIAFLLLSYMIAVLAPSLFNPRMILIIIIIGTSYFFGRARDLGVNYYSRFHFTILGCLLVTLAITTLLMLQNYQFNIEIYQHNPLNVKYLSAWAITYLIYLPWVFIGNLGLKSYGEWAQKRFERDMDELENGE
>NZ_AP017652.1|WP_096406492.1|601210_601684_+|hypothetical-protein
MKNRKKLVIKDERTEKLDGNISGEILLGICLFLALEIFAKVYIFNLTLLSYLPELLLLIGVGLYAIIRRMYVGIDIRDIVENTGKERILSALVFSIVILLIDIVGNREELVNLLTWKYSLKVVLAVIIYLVGSFSMDRVILYLNRRNQQVWEEEDEK
>NZ_AP017652.1|WP_001107501.1|601011_601221_+|helix-turn-helix-transcriptional-regulator
MAKNLKLKLARVELDMTQGDLAEAVGVTRQTIGLIEAGKYNPSLSLCQSICRCLGKTLDQLFWEEEDEK
>NZ_AP017652.1|WP_096406489.1|600402_600813_+|GNAT-family-N-acetyltransferase
MYLRLENIESEKAREIANQIRAYNRSKREEAESEPLNLYLEDEKGNLMAGLVAETFGNWLEIEYLFVKEELRGQGIGSKLLQQAENEAKNRNCRFAFVNTYQFQAPDFYLSHGYKEVFTLQDYPYTGQRYYYQKDL
>NZ_AP017652.1|WP_172842381.1|598938_600303_+|amino-acid-permease
MSEYKKKNKMERGLTNRHVQVMAIAGTIGTGLFLGAGRSISLTGPSIILIYMITGAFMFLMMRAVGEMLYQDPEQHTFINFITRHLGKGWGYFSVWSYWLSVVFIGMAEITAISDYVRFWFPTWPSWMVQLVFLTILALVNLIAVKLFGEVEFWFAMVKIVAILSMIATGVFMVLTGFKTPHGVASLANISDQFSLFPNGVMNFVMAFQMVFFAYLMIEFIGVTTSETKNPRQVLPKAVKEIPLRIIFFYGGALIAIMAIIPWSYLNSSDSPFVTVFELAGIKWAAALINFVVLTSAASALNSTLYSTGRHLYQIAHDSPNRFLKAIKVDTLSRHNVPQNAIIASAILIALAAFINVLPGVSDAFALITASSSGVYIAIYILIMMAHLKYRKSQDFMADGYLMPQYRLLNPLTILFFVFVFVTLFLQESTFLGAVGSAIWILVFGIYSQWKFRK
>NZ_AP017652.1|WP_096406487.1|598377_598860_+|transcription-elongation-factor-GreA
MAEKTYPMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVALDEVAIGKTVTIQEIGEDDEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATIETPVGSYQVKILKVEKTA
>NZ_AP017652.1|WP_096406484.1|596568_598314_+|endolytic-transglycosylase-MltG
MTEKQRDTEKLSFKEQILRDLERVKEQDRREREVEIPNVKTSSTQPSSATPSDLEPETSTEELMADSLSVVDKILKNAPSVPPLSSARTDETDDQEEKEIRQPIIDKIEVVESEEPLVEPIHLAEEPVVEPVQPKVEPVELKPEEKEFNDTPTKVAVTYKTEDKKEEITPGMPERVEPVSTESSSGLADAPRRSRRQGATSTKKKKKSKAKGCLVTVLVFLVLVVVGGYFGYGYVQDSLKPVDASSKDYVTVQIPDGANVQEIGSTLEKSGLVKHGLIFSLYAKYYSHANLKSGYYNLKKSMSTDELIQELEKGGTPEAQAPVLANLTIPEGYTLEQIAQTVGQLQGEFKEPLTADAFLAKAQDETFISQLVAKYPNLLGSLPTKDSGVRYRLEGYLFPATYTIKDSTTVESLIDEMVAAMDKAMSPYYATIKEKNLTVNELLSIASLVEKEGAKTEDRKKIAGVFYNRLNVGMPLQSNIAILYAEGKLGQKISLADDATIDTNIDSPYNVYTHLGLMPGPVDSPSLDAIEASVNQTKSDYLYFVANVEDGKVYFATTKEEHDQNVAEHINSKLPQSSSSN
>NZ_AP017652.1|WP_096406481.1|595984_596488_+|GNAT-family-N-acetyltransferase
MKIRQARFSDLDRILEIELENFSLEEAIPRSIFEAHLREIQTSFLVAEKEGRVLGYIEGPVVPHRHLQDLSFTEEIADHSHKSGGYISVTCLSIAKEAQALGVGKRLLTALKEVALEHEREGINLTCHDYLIPYYEKHGFVNEGLSQSSFAGETWYDMVWQPENKEN
>NZ_AP017652.1|WP_096406502.1|604908_605460_+|GNAT-family-N-acetyltransferase
MKAIGTQMLQTERLILRRFVESDAEAMFQNWASSAENLTYVTWDPHPDVEVTRNSIRNWVASYVNPNYYKWAICLKENPEQVIGDISIVEMNEKDSSCEIGYVLGKDYWGRGMMTEALKAVLDFCFTQAGFQKVRARYASLNPASGRVMEKAGMSYLKTIANGVERKDYVADLIYYQISREDR
>NZ_AP017652.1|WP_096406505.1|605623_606334_+|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MDNVIFFISVFFAGILSFFSPCILPLLPVYAGVLLDDKNDAQASSGKFSISLVSLLRTLAFIAGISFIFILLGYGAGFLGNFLYASWFQYVTGAVIILLGLHQMEVLHLQGLYKEKRLQLKRQGQKGNGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGLALPFLVLALASSYVLKHFRKLHPYLGTLKKVGGFLIIVMGILVLLGNASILTTLFE
>NZ_AP017652.1|WP_096406507.1|606347_606911_+|redoxin-family-protein
MKKWQTCLLGVGSICCLAACSAKNMSDEATMKEQNKTEQVGAQTATKGQAVADFELTGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKDAGDDYVVLTVVSPGHKGEQAEADFKNWYKGLDYKNLPVLIDPSGKLLESYGVRSYPTQAFIDKEGKLVKTQPGFMDKDMILKTLKEMG
>NZ_AP017652.1|WP_096406510.1|606920_608033_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MNDKVKLFVLAGVILLVLTGFYFLLMRNAGQTDSSQIEKASVSQGGKTVKKTEVSKDADLHEIYLAGGCFWGVEEYFSRVPGVTDAVSGYANGRGETTKYELINQTGHAETVHVTYDANQISLKEILLHYFRIINPTSKNKQGNDVGTQYRTGVYYTDDKDLEVINQVFDEVAKKYDQPLAVEKENLKNFVVAEDYHQDYLKKNPNGYCHINVNQAAYPVIDASKYPKPSDEELKKTLSPEEYAVTQKNQTERAFSNRYWDKFESGIYVDVATGEPLFSSKDKFESGCGWPSFTQPISPDVATYKEDKSYNMTRMEVRSRVGDSHLGHVFTDGPQDKGGLRYCINSLSIRFIPKDQMAEKGYAYLLDYVD
>NZ_AP017652.1|WP_096406513.1|608103_608841_+|response-regulator-transcription-factor
MTYTILIVEDEYLVRQGLTKLVNVAAYDMEIIGQAENGRQAWELIQQQVPDIILTDINMPQLNGIQLASLVRETYPQVHLVFLTGYDDFDYALSAVKLGVDDYLLKPFSRQDIEEMLGKIKQKLDKEEKEEQLQDLLTDKFEGNIAQKIQSHLADSQFSLKSLASELGFSSTYLSSLIKKELGLPFQDYLVRERVKQAKLLLLTTDLKIYEIAEKVGFEDMNYFTQRFKQIAGVTPRQFKKGEGR
>NZ_AP017652.1|WP_096406515.1|608837_610529_+|sensor-histidine-kinase
MKRSSLLVRMVISIFLVFLILLAVVGTFYYQSSSSAIEATIEGNSQTTISQTSHFIQSYIKKLETTSTSLTQQEDLLAYAENPNQDQVKGIRDLFLTILKADQDLKTVVLVTKSGQVISTDDSVQMKTSSDMMAEDWYQKAIHQGAKPVLTPARKSDSQWVISVTQELVDAKGANLGVLRLDISYETLEAYLNQLQLGQQGFAFIINEKHEFVYHPKRTVYSSASEMEAMKPYIETGQGYTPDHQSYVSQEKIAGTDWTVIGVSSLEKLDQVRSQLMWTLLAASVTSLLACLCLVWFSLKRWIAPLKDLRETMLKIASGGQNLRAKETGAHELREVTRQFNAMLDQIDQLMAAIRRQEETTRQYELQALSSQINPHFLYNTLDTIIWMAEFQDSQRVVQVTKSLATYFRLALNQGKDLIFLSDEINHVRQYLFIQKQRYGEKLEYEIAEDPDFDNLVLPKLVLQPLVENALYHGIKEKDGQGHIKVSVQKKDSGLIIRIEDDGVGFQATSDSSQSQLKRGGVGLQNVDQRLKLHFGEDYQMKIDSIPSKGTTVEIYINGIETS
>NZ_AP017652.1|WP_000659498.1|610643_611207_+|TIGR01440-family-protein
MKEKDIQRATSQIVEDVIDKANLKQGAIFVLGLSSSEVIGGQIGKESSQEIGEIIVKTILDILEEKGIHLAVQGCEHVNRALVVERQVAEQFGLEMVSVLPSLHAGGSGQLAAFKFMQDPVEVEFIKAHAGLDIGDTAIGMHVKHVQVPIRPVLREIGYAHVTALASRPKLIGGARAQYPEDSIRKS
>NZ_AP017652.1|WP_172842382.1|611209_617056_+|G5-domain-containing-protein
MKKTKQQLEKITKYSIRKLTVGVGPVAIGAFLFGASTLSVDKVHANEVGGAHSVHYRYLAEQELTESEKALIHHEVPTEFQDEDIIYVVYRKKETNSQQLPYTGSKELALAGLGLATASLAVLLVSKKHRSKVLGILLISSICISNFVPFTAFAFENKELLSYNQTISASTHEGLAKGVIHIEGYEYVGYFKESKSTINTSSKKGESLVQEPQAAYTGKVEAKGTQEPGKEGESLAQEPQEAYTGKVEAKGTQEPGKEGESLVQEPQAEYTGKIEAKGTQEPGKEGESLVQEPQAEYTGELEAKGTQEPGKEGESLVQEPQAEYTGELEAKGTQEPGKEGESLVQEPQAEYTGKLEAKGTQEPGKKGESLVQEPQAEYTGKLEAKGTQETGKEGESVVQEKLPEYKVAEGAVTKETTTEIDYKIEIIEDPTKYTDEETVIQDGEKGSQITKTTYKALDGIETDQVLNTTTTVIKEPVTKKISRGTKPIEGTLVEESLEKIPFKEVVKEDDQLKKGERVTVQEGKDGQKKVIKTYKTIKGLKTEEAPKVVEQVLELDQDRIVKLGTKNFEKPVLTITAVEPKDLKRTSDVKYSLENPSKVAIKSITLTLKKGDEIVKTLTISPDNLTASLTDLQYYKDYKLETKMVYDRGEGDEEEILREEPLRIDLKKVEVKNIKETSLISVDTDGVETDSSFLTSVPTDVKPYYLKIATHDNKVTRLAVDKIEEVTVDGKTLYKVTAKAPDLVQHTNGNELSEEYVHYFAKPKSHEENVYYDFNELVKAMQANRKGTFKLGADLNAANVPTPNKQYVPGVFNGHLTSVDGKQYTIHNIARPLFERIENASVKNINLGNVNINMPWAENIAPVARIVKNAVIENVKVTGHIIAKNDIAGVVNKLDGEGAKVNNVAFIGKIDGVGDKGWNLAGIVGEIWKGHANKTYVEADITATKARVAGLASTVDNSSDPNGIGKYGTVRNSVAKGTIKVKSPVDVGGFISKNWVWGKLENNVSMMKVENGEEFYGSGDIDYDGGYFTNNALERNFVVKDVSAGKHSFKYSRSHRIREISLEEANTKIDAMGITADKFEIKPLIEDTLNNTKSLDKTYKDTQDYRIDRELAYRNIEKLQPFYNKEWIVNQANKLEASSNLVTKEVLSVTGMKDGQFVTDLSDVDHIMIHYADGTKEEKVVTRKADSQVQQVREYSIEGLGDVVYTPNMVVKDRTQLINDIKAKLAGVELISPEVRALMDKRNKPQENTDERKNGYIRDLFLEESFDEVKQNLGNLVKQIVENEDHQLNDDEAAQRAFIKKVKDNKANIMMGLAYLNQYYGIKYDELSIKDIMMFKPDFYGKNVNVLDRLITIGSKENNLKGDQSQDAYSRVIAGATGKGSLHEFLTYNMKLFTNETDMNVWFKKAIEKNAYVVEQPSLNPDFAHKKYRLYEGINNGVHGRMILPLLNLKNSHLFMISTYNTISFSAFEKYGKNTEEAREAFKSEINKRAKEQVNYLDFWSKLAADNVRNKLLKSENSVPTPVWDNHDAPGIGWANRYGHKDGKPDYAPIREFFGRIHKYHGYQYGYGAYAYIFAAPNQQDAVYFVMTELISDFGTSAFTHETTHVNDRMAYYGGWYHREGTDLESFAQGMLQSPSLTNPNGEYGALGLNMAYERQNDGNQIYNYDPNKLKNREEIDHYMKNYNEALMMLDHLEADAVIGKHLDDNSKWFKKMDREWRTNAERNNLKGEPHQWDKLRDLTDNEKKLTITSIDQLVDHNFVTKHGMPGNGRYRSEGFDSAYQTVNMMSGIFGGNTSKSTVGSISFKHNAFRMWGYYGYLNGFIGYASNKYKAEANNENKGLLGDDFIIKKISNGQFDTLEAWKKHWYKEVYDKAQNGFTTIEINGRSISTYAELKSLFDEAVQKDLDSLENPNIKNHYKNTEDLKWKVYKQLLQKSDGFSGNLFTKTSL
>NZ_AP017652.1|WP_096406520.1|617122_618844_+|aminodeoxychorismate-synthase-component-I
MHRKTVIDFRALGERYTFTQPIKELKTRDLAEVADLLAQVESYQEQGYYVVGYVSYEAAPAFEEKLAVHKLPLLGEYLLYFTVHDRVETSPIPLTYEEVDLPSKWQEVTSEADYEKAIGQIHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEAGYNAYVEHDEMAVISMSPELFFEQNDRELTTRPMKGTTQRGVTDQEDLAQASWLEQDPKNRSENMMIVDLLRNDMNRISEVGCEHVERLCQVEQYSTVWQMTSTIKSQLRPDVDLVAIFRSLFPCGSITGAPKIATMEIIKDLEPQPRGVYCGTIGLLLPNGRRIFNVAIRTIQLHQGKAIYGVGGGITWDSTWESEYREVHQKAAVLYRKQARFKLITTGRVSQKSLLFEDQHLERLTKASRYFAYPFDLEELRQKIEEECQACDSHQDYRLRISLSKSGEIELSRQILAPLSPSFCKAKLCLQEADLNQSFTYFKTTHRPHLSLGEQEIIYHNVAGELLETSIGNLVLKIAGKLYTPPTSLGILPGTYRQHLLERGQVEEKVLTLADLNQAETIYGCNAVRGLYELELIVL
>NZ_AP017652.1|WP_096406523.1|618934_620326_+|Ltp-family-lipoprotein
MKKSKKILVTSLATATLGLISFADTTGDFPFSAQHVSAQEKDASKNGKVVKENTTSAPNQAEKPKTPAPKSAPKPEPKPAPKPEPKPAPKPAPKPAEKPKTPAQKPAEKPKNISPKEDKSKSTAQSGWVGSSYYENGAKVTNKWIFDKKANSYFYLNSSGNYVQNAWVDNYYLKSDGKMAKNEWIYDKNYGSYYYLTAEGSYARNTWVGNYYLKSNGKMAKGEWVYDKNYGSYYYLTAEGSYARDAWSGNYYLKSNGKMAKGEWIYDKNNGSYYYLTAEGSYARNAWSGNYYLKSNGKMAKSEWVYDKNYGSYYYLTSEGSYARSTWVGNYYLKSNGKMAKSEWVDGGRYYVGANGLWETKSSTNSEYSAALEKAKSYNSLFHMSKKRMYRQLTSQFDKFSNDAAQYAIDHLKADYKYNALFNAKNYRKLFNMSKSGLFNQLTSYIDGFTEEEANYAIQHLDD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP017652_1	1.1\|531669\|25\|NZ_AP017652\|PILER-CR	531669-531693	25	MK448735	Streptococcus phage Javan349, complete genome	30633-30657	2	0.92
NZ_AP017652_1	1.1\|531669\|25\|NZ_AP017652\|PILER-CR	531669-531693	25	MK448892	Streptococcus phage Javan268, complete genome	29140-29164	2	0.92
NZ_AP017652_1	1.3\|531669\|30\|NZ_AP017652\|CRISPRCasFinder	531669-531698	30	MK448735	Streptococcus phage Javan349, complete genome	30628-30657	2	0.933
NZ_AP017652_1	1.3\|531669\|30\|NZ_AP017652\|CRISPRCasFinder	531669-531698	30	MK448892	Streptococcus phage Javan268, complete genome	29135-29164	2	0.933
NZ_AP017652_2	2.1\|604662\|25\|NZ_AP017652\|CRISPRCasFinder	604662-604686	25	MG592472	Vibrio phage 1.100.O._10N.261.45.C3, partial genome	51230-51254	5	0.8
NZ_AP017652_1	1.3\|531669\|30\|NZ_AP017652\|CRISPRCasFinder	531669-531698	30	MT162466	Synechococcus phage S-N03, complete genome	76671-76700	7	0.767
NZ_AP017652_1	1.4\|531734\|30\|NZ_AP017652\|CRISPRCasFinder	531734-531763	30	MG592522	Vibrio phage 1.154.O._10N.222.52.B12, partial genome	25176-25205	8	0.733
NZ_AP017652_1	1.4\|531734\|30\|NZ_AP017652\|CRISPRCasFinder	531734-531763	30	MG640035	Vibrio phage Athena1, complete genome	4520-4549	8	0.733

1. spacer 1.1|531669|25|NZ_AP017652|PILER-CR matches to MK448735 (Streptococcus phage Javan349, complete genome) position: , mismatch: 2, identity: 0.92

gaccttggagaccatcagacgtatt	CRISPR spacer
gaccttggagaccatcagatgcatt	Protospacer
*******************.*.***

2. spacer 1.1|531669|25|NZ_AP017652|PILER-CR matches to MK448892 (Streptococcus phage Javan268, complete genome) position: , mismatch: 2, identity: 0.92

gaccttggagaccatcagacgtatt	CRISPR spacer
ggccttggagaccgtcagacgtatt	Protospacer
*.***********.***********

3. spacer 1.3|531669|30|NZ_AP017652|CRISPRCasFinder matches to MK448735 (Streptococcus phage Javan349, complete genome) position: , mismatch: 2, identity: 0.933

gaccttggagaccatcagacgtattgataa	CRISPR spacer
gaccttggagaccatcagatgcattgataa	Protospacer
*******************.*.********

4. spacer 1.3|531669|30|NZ_AP017652|CRISPRCasFinder matches to MK448892 (Streptococcus phage Javan268, complete genome) position: , mismatch: 2, identity: 0.933

gaccttggagaccatcagacgtattgataa	CRISPR spacer
ggccttggagaccgtcagacgtattgataa	Protospacer
*.***********.****************

5. spacer 2.1|604662|25|NZ_AP017652|CRISPRCasFinder matches to MG592472 (Vibrio phage 1.100.O._10N.261.45.C3, partial genome) position: , mismatch: 5, identity: 0.8

aaggtcctgtagacctttttaccct	CRISPR spacer
aaggtactgtagacctttttaggaa	Protospacer
***** ***************

6. spacer 1.3|531669|30|NZ_AP017652|CRISPRCasFinder matches to MT162466 (Synechococcus phage S-N03, complete genome) position: , mismatch: 7, identity: 0.767

gaccttggagaccatcagacgtattgataa	CRISPR spacer
gctcgtggagaccatcagtcttattgatgg	Protospacer
* .* ************* * *******..

7. spacer 1.4|531734|30|NZ_AP017652|CRISPRCasFinder matches to MG592522 (Vibrio phage 1.154.O._10N.222.52.B12, partial genome) position: , mismatch: 8, identity: 0.733

tttctgcgttggatgcgccttggcgttgta	CRISPR spacer
caagtcagttggatacgccttggcgttgtc	Protospacer
.   *  *******.**************

8. spacer 1.4|531734|30|NZ_AP017652|CRISPRCasFinder matches to MG640035 (Vibrio phage Athena1, complete genome) position: , mismatch: 8, identity: 0.733

tttctgcgttggatgcgccttggcgttgta	CRISPR spacer
caagtcagttggatacgccttggcgttgtc	Protospacer
.   *  *******.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4188 : 66281

Streptococcus_phage(63.46%)

holin,capsid,integrase,portal,head,tail,terminase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096405649.1\|4188_4758_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_096405651.1\|4758_8262_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_001234973.1\|8319_8586_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_000041917.1\|8578_8947_+	septum formation initiator family protein	NA	NA	NA	NA
WP_096405653.1\|9066_10335_+	serine hydrolase	NA	NA	NA	NA
WP_096405655.1\|10331_11609_+\|tRNA	tRNA lysidine(34) synthetase TilS	A7K9Y8	Acanthocystis_turfacea_chlorella_virus	3.8e-10	25.4
WP_096405657.1\|11613_12156_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	4.7e-10	28.8
WP_000744576.1\|12171_14130_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	H8ZJI5	Ostreococcus_tauri_virus	1.1e-106	47.3
WP_096408773.1\|20935_22222_+	adenylosuccinate synthase	L7Y4J5	Megavirus	6.6e-71	36.7
WP_096405661.1\|22423_22891_+	nucleoside deaminase	NA	NA	NA	NA
WP_096405663.1\|23099_24242_-\|integrase	site-specific integrase	U4KJ82	Streptococcus_phage	1.2e-204	96.1
WP_096405665.1\|24367_24832_-	hypothetical protein	Q708S1	Streptococcus_phage	4.4e-33	68.2
WP_096405666.1\|24857_25595_-	helix-turn-helix transcriptional regulator	A0A1S5S8S8	Streptococcus_phage	8.9e-105	76.4
WP_172842410.1\|25749_25968_+	helix-turn-helix transcriptional regulator	A0A1S5S8R4	Streptococcus_phage	6.6e-24	75.7
WP_172842362.1\|26022_26175_+	hypothetical protein	A0A1S5S8Z4	Streptococcus_phage	3.5e-08	58.0
WP_096405670.1\|26128_26776_-	hypothetical protein	Q7Y4L3	Streptococcus_phage	3.2e-98	83.6
WP_054380428.1\|27124_27397_+	hypothetical protein	A0A141E0V6	Streptococcus_phage	1.1e-41	97.8
WP_096405673.1\|27578_27878_+	hypothetical protein	A0A1S5SDL6	Streptococcus_phage	8.2e-17	47.5
WP_096405675.1\|27892_29173_+	AAA family ATPase	A0A097BY67	Enterococcus_phage	2.2e-151	66.1
WP_096405677.1\|29176_30304_+	ATP-binding protein	Q5YA96	Bacillus_phage	1.2e-105	60.8
WP_096405678.1\|30367_30919_+	hypothetical protein	A0A097BY29	Enterococcus_phage	8.9e-33	47.5
WP_096405680.1\|30929_32513_+	DEAD/DEAH box helicase	A0A097BY72	Enterococcus_phage	1.6e-236	77.0
WP_096405682.1\|32528_34814_+	AAA family ATPase	A0A2I7SC35	Paenibacillus_phage	1.9e-291	65.8
WP_096405683.1\|35045_35447_+	RusA family crossover junction endodeoxyribonuclease	Q5YA86	Bacillus_phage	9.9e-42	62.0
WP_096405685.1\|35443_35659_+	hypothetical protein	NA	NA	NA	NA
WP_096405687.1\|35662_35851_+	hypothetical protein	A0A2H4JBP8	uncultured_Caudovirales_phage	2.8e-15	77.6
WP_096405689.1\|35843_36533_+	DUF1642 domain-containing protein	A0A2H4JBN7	uncultured_Caudovirales_phage	2.3e-86	68.1
WP_096405690.1\|36529_37054_+	hypothetical protein	NA	NA	NA	NA
WP_096408775.1\|37081_37585_+	DUF1642 domain-containing protein	A0A2H4JBN7	uncultured_Caudovirales_phage	3.9e-27	48.6
WP_096405692.1\|37749_38088_+	hypothetical protein	A0A1S5SDI1	Streptococcus_phage	1.4e-52	83.9
WP_096405693.1\|38089_38350_+	DUF1372 family protein	A0A1S5SFG2	Streptococcus_phage	8.7e-39	91.9
WP_096405695.1\|38346_38838_+	DNA-binding protein	A0A1S5SA39	Streptococcus_phage	1.0e-64	75.5
WP_096405696.1\|38834_39224_+	hypothetical protein	A0A1S5S8G9	Streptococcus_phage	1.6e-41	65.4
WP_096405698.1\|39220_39469_+	hypothetical protein	NA	NA	NA	NA
WP_096405700.1\|39458_39692_+	helix-turn-helix transcriptional regulator	A0A1S5SG49	Streptococcus_phage	4.7e-12	47.8
WP_096405702.1\|39696_40122_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SF97	Streptococcus_phage	1.1e-35	55.5
WP_096405703.1\|41315_41810_+\|terminase	terminase small subunit	A0A1S5SF14	Streptococcus_phage	4.3e-79	95.7
WP_096405705.1\|41799_43014_+\|terminase	PBSX family phage terminase large subunit	A0A1S5SES0	Streptococcus_phage	1.4e-219	92.3
WP_096405706.1\|43025_44438_+\|portal	phage portal protein	A0A1S5SDU7	Streptococcus_phage	1.5e-225	84.3
WP_096405708.1\|44400_46422_+\|capsid	minor capsid protein	A0A141E1T6	Streptococcus_phage	8.5e-166	84.7
WP_096405709.1\|46434_46650_+	hypothetical protein	NA	NA	NA	NA
WP_157740105.1\|47133_47301_+	hypothetical protein	NA	NA	NA	NA
WP_096405711.1\|47319_47532_+	hypothetical protein	A0A1S5SCQ9	Streptococcus_phage	7.8e-30	91.4
WP_096405713.1\|47642_48155_+	DUF4355 domain-containing protein	A0A141E1X5	Streptococcus_phage	6.3e-49	74.6
WP_096405714.1\|48182_49199_+	sugar-binding protein	A0A1S5SDM6	Streptococcus_phage	1.3e-175	92.6
WP_096405716.1\|49209_49413_+	hypothetical protein	NA	NA	NA	NA
WP_096405717.1\|49421_49733_+\|head,tail	phage head-tail connector protein	A0A1S5S8S7	Streptococcus_phage	2.2e-33	71.8
WP_096405719.1\|49713_50052_+	hypothetical protein	A0A1S5S812	Streptococcus_phage	5.4e-41	75.9
WP_096405720.1\|50026_50539_+	HK97 gp10 family phage protein	A0A1S5S809	Streptococcus_phage	1.6e-60	70.2
WP_096405722.1\|50535_50904_+	hypothetical protein	A0A060QNT4	Streptococcus_phage	6.1e-54	80.3
WP_096405724.1\|50907_51321_+\|tail	phage tail protein	A0A1S5SF61	Streptococcus_phage	3.9e-65	89.1
WP_096405726.1\|51324_51717_+	hypothetical protein	A0A141DZN3	Streptococcus_phage	2.2e-41	67.7
WP_096405728.1\|51767_52109_+	hypothetical protein	X2KU36	Streptococcus_phage	3.0e-39	79.4
WP_096405729.1\|52109_55349_+	hypothetical protein	A0A1S5S8S1	Streptococcus_phage	4.5e-201	60.0
WP_096405731.1\|55360_55711_+	hypothetical protein	A0A1S5SCJ5	Streptococcus_phage	9.8e-54	87.1
WP_172842363.1\|55719_59001_+\|tail	tail fiber domain-containing protein	E8ZDU0	Streptococcus_phage	7.7e-233	41.6
WP_096405733.1\|58997_59207_+	hypothetical protein	Q9AF64	Streptococcus_phage	5.0e-21	79.7
WP_096405735.1\|59196_59784_+	hypothetical protein	A0A2H4J9Y8	uncultured_Caudovirales_phage	5.3e-36	44.8
WP_096405737.1\|59794_60235_+	hypothetical protein	A0A2H4J6Y6	uncultured_Caudovirales_phage	1.6e-45	69.2
WP_096405739.1\|60218_60551_+\|holin	phage holin	A0A1S5SCK0	Streptococcus_phage	3.4e-48	94.5
WP_096405741.1\|60553_61420_+	CHAP domain-containing protein	Q3BLW5	Phage_SK137	4.6e-68	71.3
WP_096405745.1\|61749_62022_+	hypothetical protein	A0A2H4JEP4	uncultured_Caudovirales_phage	1.1e-31	83.8
WP_096405746.1\|62195_62639_+	dUTP diphosphatase	Q332E8	Clostridium_botulinum_C_phage	1.1e-30	48.0
WP_172842364.1\|62640_63156_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_172842411.1\|63166_64531_+	DNA repair protein RadA	NA	NA	NA	NA
WP_172842365.1\|64603_65098_+	carbonic anhydrase	NA	NA	NA	NA
WP_000010178.1\|65312_66281_+	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	2.5e-46	35.5

DBSCAN-SWA_2

72776 : 84324

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096405762.1\|72776_74936_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.0e-44	28.1
WP_096405764.1\|74948_76298_+	HlyD family secretion protein	NA	NA	NA	NA
WP_172842366.1\|76466_77174_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	1.0e-41	38.4
WP_096405768.1\|77385_81111_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	4.6e-40	26.8
WP_096405770.1\|81272_82715_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.9
WP_096408784.1\|82753_83776_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	4.4e-62	43.1
WP_096405771.1\|83772_84324_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.0e-24	35.2

DBSCAN-SWA_3

122893 : 135788

Streptococcus_phage(81.82%)

integrase

attL 119753:119770|attR 137007:137024

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
119753:119770	attL	NA	NA	NA	NA
WP_096405815.1\|122893_124060_-\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	8.7e-163	71.6
WP_096405816.1\|124339_125239_-	Abi family protein	NA	NA	NA	NA
WP_096405818.1\|125539_126130_-	helix-turn-helix transcriptional regulator	A0A1W6JQE6	Staphylococcus_phage	2.5e-09	40.0
WP_096405819.1\|126290_126488_+	helix-turn-helix transcriptional regulator	A0A1X9I5U5	Streptococcus_phage	5.8e-19	70.8
WP_096405821.1\|126606_127266_-	hypothetical protein	A0A1S5S7L0	Streptococcus_phage	6.1e-97	82.2
WP_096405822.1\|127322_127949_+	Rha family transcriptional regulator	R9QNB1	Lactococcus_phage	1.4e-29	40.0
WP_096405824.1\|128228_128429_+	hypothetical protein	NA	NA	NA	NA
WP_096405825.1\|128430_128646_+	hypothetical protein	NA	NA	NA	NA
WP_096405827.1\|128642_128984_+	DNA-binding protein	NA	NA	NA	NA
WP_096405828.1\|128976_129249_+	transcriptional regulator	A0A1X9I5U9	Streptococcus_phage	1.7e-29	72.1
WP_172842368.1\|129245_129392_+	hypothetical protein	NA	NA	NA	NA
WP_096405830.1\|129397_130990_+	DNA primase	A0A1X9I717	Streptococcus_phage	4.3e-213	68.5
WP_096405831.1\|131310_131487_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	5.9e-07	53.4
WP_096405833.1\|131500_132025_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	2.1e-36	48.1
WP_172842412.1\|132114_132624_+	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	3.4e-47	53.9
WP_096405836.1\|133320_133740_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_172842369.1\|133910_134066_+	hypothetical protein	NA	NA	NA	NA
WP_004245873.1\|134068_134224_+	hypothetical protein	NA	NA	NA	NA
WP_096405839.1\|134981_135788_+	hypothetical protein	M1PFV6	Streptococcus_phage	7.1e-23	32.8
137007:137024	attR	NA	NA	NA	NA

DBSCAN-SWA_4

543495 : 552874

Streptococcus_phage(42.86%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172842380.1\|543495_544479_+	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	4.9e-74	47.1
WP_004240353.1\|544561_544765_-	ferredoxin	NA	NA	NA	NA
WP_000410182.1\|544810_545320_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_096406377.1\|545329_546004_+	(d)CMP kinase	NA	NA	NA	NA
WP_096406380.1\|546122_546629_+	dihydrofolate reductase	G3MBI7	Bacillus_virus	3.1e-24	41.9
WP_096406382.1\|546830_548063_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.9e-132	59.2
WP_000405203.1\|548071_548659_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_001140420.1\|548668_549049_+	RidA family protein	NA	NA	NA	NA
WP_096406386.1\|549100_549991_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.5e-05	29.8
WP_096406389.1\|549987_550965_+	YvcK family protein	A1IMD5	Streptococcus_phage	2.9e-172	92.6
WP_096406391.1\|550961_551873_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-147	91.1
WP_096406394.1\|551905_552874_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	3.8e-63	94.4

DBSCAN-SWA_5

1012442 : 1017161

Streptococcus_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001813542.1\|1012442_1012688_+	hypothetical protein	A0A1B0RXA7	Streptococcus_phage	2.6e-37	98.8
WP_000806926.1\|1012684_1013020_+	hypothetical protein	NA	NA	NA	NA
WP_000567222.1\|1013032_1013401_+	hypothetical protein	A0A1B0RXA8	Streptococcus_phage	1.1e-58	97.5
WP_001072467.1\|1013387_1013687_+	hypothetical protein	A0A1B0RX98	Streptococcus_phage	1.8e-48	96.0
WP_000420313.1\|1013804_1015268_-	ABC-F type ribosomal protection protein Msr(D)	A0A1B0RXA0	Streptococcus_phage	3.7e-251	97.3
WP_000417519.1\|1015387_1016605_-	macrolide efflux MFS transporter Mef(A)	A0A2K5B2B5	Erysipelothrix_phage	5.1e-198	90.6
WP_000873143.1\|1016990_1017161_-	hypothetical protein	A0A1X9I6E4	Streptococcus_phage	3.7e-22	98.2

DBSCAN-SWA_6

1211168 : 1219589

Streptococcus_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096407620.1\|1211168_1212047_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.0e-115	75.4
WP_000358227.1\|1212049_1212367_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.2e-28	60.0
WP_096407623.1\|1212403_1213294_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.4e-75	52.4
WP_096407625.1\|1213290_1213929_-	dTMP kinase	M1PSC7	Streptococcus_phage	5.7e-76	67.6
WP_096407628.1\|1214049_1214847_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	3.8e-61	52.5
WP_096407631.1\|1214850_1216113_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.5e-141	65.5
WP_096407633.1\|1216122_1217253_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.2e-115	59.2
WP_096407636.1\|1217333_1218233_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_096407638.1\|1218216_1218684_-	signal peptidase II	NA	NA	NA	NA
WP_001025720.1\|1218680_1219589_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	4.0e-06	27.0

DBSCAN-SWA_7

1271298 : 1278753

Streptococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096407744.1\|1271298_1272618_-	CapA family protein	A0A0N9SJ77	Staphylococcus_phage	2.4e-31	28.2
WP_045616898.1\|1272773_1273385_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.2e-16	43.2
WP_096407746.1\|1273429_1274158_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_096407749.1\|1274394_1275306_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.1e-91	51.8
WP_000926604.1\|1275371_1275596_-	DUF4059 family protein	NA	NA	NA	NA
WP_096407752.1\|1275674_1276418_-	amino acid ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.8e-12	27.4
WP_049537241.1\|1276417_1277218_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_096407754.1\|1277374_1277731_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	3.7e-32	56.4
WP_096407757.1\|1277743_1278259_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.9e-46	53.1
WP_096407759.1\|1278255_1278753_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.7e-41	52.4

DBSCAN-SWA_8

1850498 : 1864579

Streptococcus_phage(90.91%)

capsid,integrase

attL 1853792:1853806|attR 1862279:1862293

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049537989.1\|1850498_1850909_-	DUF722 domain-containing protein	C5J954	Streptococcus_phage	4.3e-16	36.3
WP_049509664.1\|1851843_1852704_-\|capsid	phage major capsid protein	A0A1S5S8J5	Streptococcus_phage	4.9e-30	31.9
WP_004261935.1\|1852752_1852983_-	hypothetical protein	NA	NA	NA	NA
WP_000997172.1\|1853072_1853234_-	hypothetical protein	NA	NA	NA	NA
WP_049537987.1\|1853230_1854076_-	ATP-binding protein	A0A1X9I6C4	Streptococcus_phage	1.7e-67	46.1
1853792:1853806	attL	NA	NA	NA	NA
WP_049537985.1\|1854087_1854978_-	conserved phage C-terminal domain-containing protein	W6LMS3	Streptococcus_phage	1.9e-45	65.7
WP_080980379.1\|1854964_1855285_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	4.4e-16	52.4
WP_061853314.1\|1855238_1855448_-	hypothetical protein	NA	NA	NA	NA
WP_049537981.1\|1855449_1855650_-	hypothetical protein	NA	NA	NA	NA
WP_049537979.1\|1855986_1856247_-	hypothetical protein	NA	NA	NA	NA
WP_049537977.1\|1856258_1856861_-	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	7.2e-12	31.1
WP_000909284.1\|1857023_1857209_-	hypothetical protein	A0A1X9I5U7	Streptococcus_phage	2.4e-06	53.2
WP_049487577.1\|1857350_1857911_+	helix-turn-helix transcriptional regulator	A0A1X9I723	Streptococcus_phage	7.4e-11	48.1
WP_096408682.1\|1857915_1858185_+	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_042900397.1\|1858371_1859136_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5S7V3	Streptococcus_phage	1.4e-137	99.2
WP_096408685.1\|1859447_1860614_+\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	2.0e-111	53.6
WP_096408913.1\|1860823_1864579_-	LPXTG cell wall anchor domain-containing protein	F8HGQ4	Streptococcus_phage	9.1e-12	27.5
1862279:1862293	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP017652

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection