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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP016988 Vibrio cholerae strain FORC_055 isolate MFDS chromosome 2, complete sequence 0 crisprs WYL,csa3,cas3 0 0 1 0
NZ_CP016987 Vibrio cholerae strain FORC_055 isolate MFDS chromosome 1, complete sequence 2 crisprs cas3,DEDDh,DinG,csx1,RT,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL 0 33 6 0

Results visualization

1. NZ_CP016988
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 117792 : 184672 55 Enterobacteria_phage(22.22%) transposase,plate NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP016987
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016987_1 2146044-2150334 TypeI-F I-F
71 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016987_2 2612707-2612951 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP016987_1 1.55|2149313|33|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149313-2149345 33 EF057797 Vibrio phage VP882, complete genome 34849-34881 0 1.0
NZ_CP016987_1 1.56|2149374|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149374-2149405 32 EF057797 Vibrio phage VP882, complete genome 1212-1243 0 1.0
NZ_CP016987_1 1.9|2146552|32|NZ_CP016987|CRISPRCasFinder,CRT 2146552-2146583 32 NC_001956 Vibrio phage fs2, complete genome 5547-5578 1 0.969
NZ_CP016987_1 1.9|2146552|32|NZ_CP016987|CRISPRCasFinder,CRT 2146552-2146583 32 AB002632 Vibrio phage fs2 DNA, complete genome 5547-5578 1 0.969
NZ_CP016987_1 1.9|2146552|32|NZ_CP016987|CRISPRCasFinder,CRT 2146552-2146583 32 NC_021562 Vibrio phage VFJ, complete genome 5264-5295 1 0.969
NZ_CP016987_1 1.54|2149253|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149253-2149284 32 NC_021562 Vibrio phage VFJ, complete genome 6395-6426 1 0.969
NZ_CP016987_1 1.53|2149193|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149193-2149224 32 NC_001956 Vibrio phage fs2, complete genome 4897-4928 2 0.938
NZ_CP016987_1 1.53|2149193|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149193-2149224 32 AB002632 Vibrio phage fs2 DNA, complete genome 4897-4928 2 0.938
NZ_CP016987_1 1.53|2149193|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149193-2149224 32 NC_021562 Vibrio phage VFJ, complete genome 4611-4642 2 0.938
NZ_CP016987_1 1.54|2149253|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149253-2149284 32 NC_001956 Vibrio phage fs2, complete genome 6678-6709 2 0.938
NZ_CP016987_1 1.54|2149253|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149253-2149284 32 AB002632 Vibrio phage fs2 DNA, complete genome 6678-6709 2 0.938
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 JF974301 Vibrio phage VD1, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces 79934-79965 2 0.938
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 MN200778 Vibrio phage VAI1, complete genome 4196-4227 3 0.906
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 MN200777 Vibrio phage VAI2, complete genome 4196-4227 3 0.906
NZ_CP016987_2 2.1|2612757|39|NZ_CP016987|PILER-CR 2612757-2612795 39 NC_021742 Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence 35428-35466 4 0.897
NZ_CP016987_2 2.1|2612757|39|NZ_CP016987|PILER-CR 2612757-2612795 39 NC_049942 Escherichia phage JLK-2012, complete sequence 23522-23560 5 0.872
NZ_CP016987_1 1.3|2146192|32|NZ_CP016987|CRISPRCasFinder,CRT 2146192-2146223 32 NZ_CP014690 Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence 45137-45168 6 0.812
NZ_CP016987_1 1.8|2146492|32|NZ_CP016987|CRISPRCasFinder,CRT 2146492-2146523 32 NC_014841 Pantoea sp. At-9b plasmid pPAT9B04, complete sequence 110186-110217 6 0.812
NZ_CP016987_1 1.57|2149434|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149434-2149465 32 MH509442 Mycobacterium phage Aminay, complete genome 38347-38378 6 0.812
NZ_CP016987_1 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147812-2147843 32 NC_048206 Escherichia virus vB_Eco_mar001J1 genome assembly, chromosome: 1 39255-39286 7 0.781
NZ_CP016987_1 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147812-2147843 32 LR027385 Escherichia virus vB_Eco_mar001J1 strain vB_Eco_mar002J2 genome assembly, chromosome: 1 10280-10311 7 0.781
NZ_CP016987_1 1.34|2148052|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148052-2148083 32 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 163753-163784 7 0.781
NZ_CP016987_1 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149914-2149945 32 MT028491 Ochrobactrum phage vB_OspM_OC, complete genome 38313-38344 7 0.781
NZ_CP016987_1 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149914-2149945 32 KY653124 Staphylococcus phage IME1367_01, complete genome 29476-29507 7 0.781
NZ_CP016987_1 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149914-2149945 32 MN602266 Bacteriophage DSS3_VP1, complete genome 26898-26929 7 0.781
NZ_CP016987_1 1.66|2149974|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149974-2150005 32 NZ_CP051681 Cohnella sp. MFER-1 plasmid unnamed1 99900-99931 7 0.781
NZ_CP016987_1 1.70|2150215|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2150215-2150246 32 NC_010576 Lactococcus phage 1706, complete genome 35467-35498 7 0.781
NZ_CP016987_1 1.10|2146612|32|NZ_CP016987|CRISPRCasFinder,CRT 2146612-2146643 32 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 488893-488924 8 0.75
NZ_CP016987_1 1.19|2147152|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147152-2147183 32 NC_015457 Shigella phage Shfl2, complete genome 154077-154108 8 0.75
NZ_CP016987_1 1.19|2147152|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147152-2147183 32 MT176426 Serratia phage PhiZZ30, complete genome 157340-157371 8 0.75
NZ_CP016987_1 1.20|2147212|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147212-2147243 32 MN698239 Pelagibacter phage HTVC023P, complete genome 23109-23140 8 0.75
NZ_CP016987_1 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147812-2147843 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 110743-110774 8 0.75
NZ_CP016987_1 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147812-2147843 32 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1022200-1022231 8 0.75
NZ_CP016987_1 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148533-2148564 32 NZ_CP015231 Epibacterium mobile F1926 plasmid unnamed1, complete sequence 935227-935258 8 0.75
NZ_CP016987_1 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148533-2148564 32 NZ_CP023000 Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence 1299867-1299898 8 0.75
NZ_CP016987_1 1.46|2148773|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148773-2148804 32 MH059636 Erwinia phage Cronus, complete genome 119784-119815 8 0.75
NZ_CP016987_1 1.47|2148833|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148833-2148864 32 NZ_MF600313 Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence 68980-69011 8 0.75
NZ_CP016987_1 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149554-2149585 32 NC_010579 Xylella fastidiosa M23 plasmid pXFAS01, complete sequence 12107-12138 8 0.75
NZ_CP016987_1 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149554-2149585 32 NC_010579 Xylella fastidiosa M23 plasmid pXFAS01, complete sequence 13259-13290 8 0.75
NZ_CP016987_1 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149554-2149585 32 NC_020121 Xylella fastidiosa subsp. multiplex strain Riv5 plasmid pXF-RIV5, complete sequence 12107-12138 8 0.75
NZ_CP016987_1 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149554-2149585 32 NC_020121 Xylella fastidiosa subsp. multiplex strain Riv5 plasmid pXF-RIV5, complete sequence 13259-13290 8 0.75
NZ_CP016987_1 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149554-2149585 32 NZ_CP040800 Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 plasmid pXFAS01, complete sequence 12107-12138 8 0.75
NZ_CP016987_1 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149554-2149585 32 NZ_CP040800 Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 plasmid pXFAS01, complete sequence 13259-13290 8 0.75
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 NZ_CP022363 Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence 663684-663715 8 0.75
NZ_CP016987_1 1.3|2146192|32|NZ_CP016987|CRISPRCasFinder,CRT 2146192-2146223 32 NZ_CP017303 Rhodococcus sp. YL-1 plasmid pYLL1 sequence 36932-36963 9 0.719
NZ_CP016987_1 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT 2146252-2146283 32 NZ_CP031957 Phaeobacter sp. LSS9 plasmid unnamed1, complete sequence 153647-153678 9 0.719
NZ_CP016987_1 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT 2146252-2146283 32 NZ_CP010682 Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence 88942-88973 9 0.719
NZ_CP016987_1 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT 2146252-2146283 32 NZ_CP010717 Phaeobacter piscinae strain P18 plasmid pP18_b, complete sequence 90395-90426 9 0.719
NZ_CP016987_1 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT 2146252-2146283 32 NZ_CP010768 Phaeobacter piscinae strain P13 plasmid pP13_a, complete sequence 88981-89012 9 0.719
NZ_CP016987_1 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT 2146252-2146283 32 NZ_CP010644 Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence 88992-89023 9 0.719
NZ_CP016987_1 1.22|2147332|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147332-2147363 32 NC_007410 Trichormus variabilis ATCC 29413 plasmid A, complete sequence 40277-40308 9 0.719
NZ_CP016987_1 1.22|2147332|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147332-2147363 32 NZ_CP047243 Trichormus variabilis 0441 plasmid unnamed1, complete sequence 50324-50355 9 0.719
NZ_CP016987_1 1.23|2147392|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147392-2147423 32 NZ_CP017300 Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence 301914-301945 9 0.719
NZ_CP016987_1 1.24|2147452|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147452-2147483 32 NZ_CP016890 Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence 241986-242017 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 NZ_CP031548 Escherichia coli strain cq9 plasmid unnamed2, complete sequence 147528-147559 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 NZ_CP042619 Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence 3149-3180 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 NZ_CP028195 Escherichia coli strain CFSAN018748 plasmid pGMI14-004_1, complete sequence 64263-64294 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 NZ_CP024145 Escherichia coli strain 14EC029 plasmid p14EC029d, complete sequence 3558-3589 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 NC_017640 Escherichia coli UMNK88 plasmid pUMNK88_Ent, complete sequence 3100-3131 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 105793-105824 9 0.719
NZ_CP016987_1 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148233-2148264 32 NZ_MG904993 Escherichia coli strain 14OD0056 plasmid p14ODTX, complete sequence 31783-31814 9 0.719
NZ_CP016987_1 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148533-2148564 32 MG592485 Vibrio phage 1.111.B._10N.286.45.E6, partial genome 21558-21589 9 0.719
NZ_CP016987_1 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148533-2148564 32 MG592484 Vibrio phage 1.111.A._10N.286.45.E6, partial genome 21567-21598 9 0.719
NZ_CP016987_1 1.45|2148713|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148713-2148744 32 NC_019746 Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence 44236-44267 9 0.719
NZ_CP016987_1 1.48|2148893|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148893-2148924 32 AP022674 Sphingomonas sp. HMP9 plasmid pHMP9 DNA, complete sequence 20455-20486 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 MH590593 Mycobacterium phage Rabinovish, complete genome 51169-51200 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 MT723944 Mycobacterium phage ChaylaJr, complete genome 49041-49072 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 MN276192 Mycobacterium phage Trinitium, complete genome 49586-49617 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 MK359330 Mycobacterium phage Iota, complete genome 50085-50116 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 KX369583 Mycobacterium phage Littleton, complete genome 50467-50498 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 DQ398053 Mycobacteriophage Catera, complete genome 49415-49446 9 0.719
NZ_CP016987_1 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149614-2149645 32 NC_008207 Mycobacterium phage Catera, complete genome 49415-49446 9 0.719
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 AP013554 Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S23-C36, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces 15700-15731 9 0.719
NZ_CP016987_1 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT 2146252-2146283 32 CP003957 Rhodococcus opacus PD630 plasmid 8, complete sequence 5451-5482 10 0.688
NZ_CP016987_1 1.8|2146492|32|NZ_CP016987|CRISPRCasFinder,CRT 2146492-2146523 32 NZ_CP045074 Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence 270088-270119 10 0.688
NZ_CP016987_1 1.8|2146492|32|NZ_CP016987|CRISPRCasFinder,CRT 2146492-2146523 32 NC_011981 Agrobacterium vitis S4 plasmid pAtS4e, complete sequence 22421-22452 10 0.688
NZ_CP016987_1 1.21|2147272|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2147272-2147303 32 JQ010983 Thermococcus prieurii virus 1, complete genome 8971-9002 10 0.688
NZ_CP016987_1 1.43|2148593|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148593-2148624 32 KT351738 Uncultured bacterium plasmid Drgb7, complete sequence 20194-20225 10 0.688
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 AP013397 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C46 12930-12961 10 0.688
NZ_CP016987_1 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149914-2149945 32 AP014018 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C106A-MedDCM-OCT-S35-C77, *** SEQUENCING IN PROGRESS *** 20047-20078 10 0.688
NZ_CP016987_1 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149914-2149945 32 AP014019 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C106A-MedDCM-OCT-S39-C83, *** SEQUENCING IN PROGRESS *** 11980-12011 10 0.688
NZ_CP016987_1 1.66|2149974|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2149974-2150005 32 NZ_AP022607 Mycobacterium branderi strain JCM 12687 plasmid pJCM12687 107423-107454 10 0.688
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NC_015712 Clostridium perfringens plasmid pCPPB-1, complete sequence 11425-11456 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NC_011412 Clostridium perfringens plasmid pCP8533etx, complete sequence 48048-48079 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NZ_CP009558 Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence 18455-18486 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NC_019687 Clostridium perfringens plasmid pCpb2-CP1, complete sequence 61537-61568 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NZ_CP025503 Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence 30155-30186 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NZ_CP023413 Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence 29535-29566 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NC_007773 Clostridium perfringens plasmid pCPF5603, complete sequence 41741-41772 11 0.656
NZ_CP016987_1 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR 2148653-2148684 32 NC_019257 Clostridium perfringens plasmid pJIR3844, complete sequence 67528-67559 11 0.656
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 NZ_LR134403 Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence 213735-213766 11 0.656
NZ_CP016987_1 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT 2149794-2149825 32 KJ094023 Listeria phage LP-101, complete genome 4208-4239 11 0.656

1. spacer 1.55|2149313|33|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to EF057797 (Vibrio phage VP882, complete genome) position: , mismatch: 0, identity: 1.0 

aatcgaaaaagagctccgcggcgacctgttcca	CRISPR spacer
aatcgaaaaagagctccgcggcgacctgttcca	Protospacer
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2. spacer 1.56|2149374|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to EF057797 (Vibrio phage VP882, complete genome) position: , mismatch: 0, identity: 1.0 

cgtcgtgtcaccttcgccggtgttcacgatac	CRISPR spacer
cgtcgtgtcaccttcgccggtgttcacgatac	Protospacer
********************************

3. spacer 1.9|2146552|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NC_001956 (Vibrio phage fs2, complete genome) position: , mismatch: 1, identity: 0.969 

gatgtgattttcatcgttcagaacatttcaat	CRISPR spacer
gatgtcattttcatcgttcagaacatttcaat	Protospacer
***** **************************

4. spacer 1.9|2146552|32|NZ_CP016987|CRISPRCasFinder,CRT matches to AB002632 (Vibrio phage fs2 DNA, complete genome) position: , mismatch: 1, identity: 0.969 

gatgtgattttcatcgttcagaacatttcaat	CRISPR spacer
gatgtcattttcatcgttcagaacatttcaat	Protospacer
***** **************************

5. spacer 1.9|2146552|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NC_021562 (Vibrio phage VFJ, complete genome) position: , mismatch: 1, identity: 0.969 

gatgtgattttcatcgttcagaacatttcaat	CRISPR spacer
gatgtgattttcatcgttcagaatatttcaat	Protospacer
***********************.********

6. spacer 1.54|2149253|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_021562 (Vibrio phage VFJ, complete genome) position: , mismatch: 1, identity: 0.969 

caatagcaggggtgattacctcttttgcttca	CRISPR spacer
caatagcaggggtgattacctcttttgcttcg	Protospacer
*******************************.

7. spacer 1.53|2149193|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_001956 (Vibrio phage fs2, complete genome) position: , mismatch: 2, identity: 0.938 

tttggctacgcttgctgccaatatcctgtcat	CRISPR spacer
cttggctacgcttgcggccaatatcctgtcat	Protospacer
.************** ****************

8. spacer 1.53|2149193|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to AB002632 (Vibrio phage fs2 DNA, complete genome) position: , mismatch: 2, identity: 0.938 

tttggctacgcttgctgccaatatcctgtcat	CRISPR spacer
cttggctacgcttgcggccaatatcctgtcat	Protospacer
.************** ****************

9. spacer 1.53|2149193|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_021562 (Vibrio phage VFJ, complete genome) position: , mismatch: 2, identity: 0.938 

tttggctacgcttgctgccaatatcctgtcat	CRISPR spacer
cttggctacgcttgcggccaatatcctgtcat	Protospacer
.************** ****************

10. spacer 1.54|2149253|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_001956 (Vibrio phage fs2, complete genome) position: , mismatch: 2, identity: 0.938 

caatagcaggggtgattacctcttttgcttca	CRISPR spacer
caatagcaggggtgatcacctcttttgcttcg	Protospacer
****************.**************.

11. spacer 1.54|2149253|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to AB002632 (Vibrio phage fs2 DNA, complete genome) position: , mismatch: 2, identity: 0.938 

caatagcaggggtgattacctcttttgcttca	CRISPR spacer
caatagcaggggtgatcacctcttttgcttcg	Protospacer
****************.**************.

12. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to JF974301 (Vibrio phage VD1, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces) position: , mismatch: 2, identity: 0.938 

ctacttgtttcttttttgtaaccacctttaca	CRISPR spacer
cgacttgtttcttttttgtgaccacctttaca	Protospacer
* *****************.************

13. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to MN200778 (Vibrio phage VAI1, complete genome) position: , mismatch: 3, identity: 0.906 

ctacttgtttcttttttgtaaccacctttaca	CRISPR spacer
caatttgtttcttttttgtgaccacctttaca	Protospacer
* *.***************.************

14. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to MN200777 (Vibrio phage VAI2, complete genome) position: , mismatch: 3, identity: 0.906 

ctacttgtttcttttttgtaaccacctttaca	CRISPR spacer
caatttgtttcttttttgtgaccacctttaca	Protospacer
* *.***************.************

15. spacer 2.1|2612757|39|NZ_CP016987|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.897 

agtaggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
agtaggtcaccagttcgattccggtagccggcaccaatc	Protospacer
********.***************.*********** *.

16. spacer 2.1|2612757|39|NZ_CP016987|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 5, identity: 0.872 

agtaggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
atcaggtcgccagttcgattccggtagccggcaccatat	Protospacer
* .*********************.***********. *

17. spacer 1.3|2146192|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP014690 (Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence) position: , mismatch: 6, identity: 0.812 

-tgcgcgtgtagggtgtgcccgatatcgagagc	CRISPR spacer
ttgca-gtgtaggttgtgcccgatagcgagaag	Protospacer
 ***. ******* *********** *****.

18. spacer 1.8|2146492|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NC_014841 (Pantoea sp. At-9b plasmid pPAT9B04, complete sequence) position: , mismatch: 6, identity: 0.812 

ttgggttgtcagggtctggaactggctcaact---	CRISPR spacer
ctgggttgtcagggtctggacctg---cacctcgg	Protospacer
.******************* ***   ** **

19. spacer 1.57|2149434|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MH509442 (Mycobacterium phage Aminay, complete genome) position: , mismatch: 6, identity: 0.812 

aagttgtcgggtcgttctcaggcttgggtgat	CRISPR spacer
acggtgtcggttcgttctcaggcatgggttgt	Protospacer
* * ****** ************ ***** .*

20. spacer 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_048206 (Escherichia virus vB_Eco_mar001J1 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781 

tcgctctcattgttggctgtacgtattattta	CRISPR spacer
tctccttcattgtttgctgtatgtattattgt	Protospacer
** *..******** ******.********

21. spacer 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to LR027385 (Escherichia virus vB_Eco_mar001J1 strain vB_Eco_mar002J2 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781 

tcgctctcattgttggctgtacgtattattta	CRISPR spacer
tctccttcattgtttgctgtatgtattattgt	Protospacer
** *..******** ******.********

22. spacer 1.34|2148052|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 7, identity: 0.781 

actcgaatgactccagttctttgccacaaata	CRISPR spacer
agtgctttgactccagttttttgccaaaaata	Protospacer
* *    ***********.******* *****

23. spacer 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 7, identity: 0.781 

aaccaccgttaccaccgccagaatcaggaagt	CRISPR spacer
taccaccgttaccaccgcgagaatccatgaat	Protospacer
 ***************** ****** . .*.*

24. spacer 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to KY653124 (Staphylococcus phage IME1367_01, complete genome) position: , mismatch: 7, identity: 0.781 

aaccaccgttaccaccgccagaatcaggaagt	CRISPR spacer
aaccaccgtcaccaccgccagattcttctagc	Protospacer
*********.************ **    **.

25. spacer 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MN602266 (Bacteriophage DSS3_VP1, complete genome) position: , mismatch: 7, identity: 0.781 

aaccaccgttaccaccgccagaatcaggaagt	CRISPR spacer
taccaccgttaccaccgccagcagcattacct	Protospacer
 ******************** * **  *  *

26. spacer 1.66|2149974|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051681 (Cohnella sp. MFER-1 plasmid unnamed1) position: , mismatch: 7, identity: 0.781 

atttggctgtcgatgattttcacggtctcttt	CRISPR spacer
atttggcaggcgatgattttcacgcccatttc	Protospacer
******* * ************** .* .**.

27. spacer 1.70|2150215|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_010576 (Lactococcus phage 1706, complete genome) position: , mismatch: 7, identity: 0.781 

gattttgataatcaacggcctgattactatca	CRISPR spacer
gattttgataatcagcggcttgatttttaagt	Protospacer
**************.****.***** .**

28. spacer 1.10|2146612|32|NZ_CP016987|CRISPRCasFinder,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

ctgagataaatcattatgcgccccaatcaatc	CRISPR spacer
gggaaataattcattatgcgccccagataagc	Protospacer
  **.**** ***************. .** *

29. spacer 1.19|2147152|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_015457 (Shigella phage Shfl2, complete genome) position: , mismatch: 8, identity: 0.75 

tcacttgtcactgatggttatattactgttaa	CRISPR spacer
actcttggcactgatggtaatattactggcgg	Protospacer
 * **** ********** ********* ...

30. spacer 1.19|2147152|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MT176426 (Serratia phage PhiZZ30, complete genome) position: , mismatch: 8, identity: 0.75 

tcacttgtcactgatggttatattactgttaa	CRISPR spacer
acttttggcactgatggtaatattactggtgg	Protospacer
 * .*** ********** ********* *..

31. spacer 1.20|2147212|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MN698239 (Pelagibacter phage HTVC023P, complete genome) position: , mismatch: 8, identity: 0.75 

gtcaggatattgaaaacctgtacattaaagac	CRISPR spacer
ttcaggatattaaaaacctgcacaaggaggat	Protospacer
 **********.********.***  .*.**.

32. spacer 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

tcgctctcattgttggctgtacgtattattta	CRISPR spacer
gcgggatgattgttggctgcacgtattaattt	Protospacer
 **   * ***********.******** **

33. spacer 1.30|2147812|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75 

tcgctctcattgttggctgtacgtattattta	CRISPR spacer
gcgggatgattgttggctgcacgtattaattt	Protospacer
 **   * ***********.******** **

34. spacer 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

attagatcgccgcgcttagcaccgcaatctat--	CRISPR spacer
catagatcgacgcgcttagcagcgc--tcgacca	Protospacer
  ******* *********** ***  ** *.

35. spacer 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.75 

attagatcgccgcgcttagcaccgca-atctat	CRISPR spacer
ggcagatggccgcgcttagcacggcacaggta-	Protospacer
. .**** ************** *** *  **

36. spacer 1.46|2148773|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MH059636 (Erwinia phage Cronus, complete genome) position: , mismatch: 8, identity: 0.75 

aattccataacggtgacgttaataccgtaatt	CRISPR spacer
attttgttaacggtgaagttaataccgaaaca	Protospacer
* **.  ********* ********** **.

37. spacer 1.47|2148833|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF600313 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence) position: , mismatch: 8, identity: 0.75 

ttctgttggctctcgtacttctcgaatctact	CRISPR spacer
gtgagcctgccctcctacttctcgaatctact	Protospacer
 *  *.. **.*** *****************

38. spacer 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_010579 (Xylella fastidiosa M23 plasmid pXFAS01, complete sequence) position: , mismatch: 8, identity: 0.75 

ctggcaaagttcttaatgaatcctttgaagtt	CRISPR spacer
ttcgcaaagctcttaaagaatcctttccagac	Protospacer
.* ******.****** *********  ** .

39. spacer 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_010579 (Xylella fastidiosa M23 plasmid pXFAS01, complete sequence) position: , mismatch: 8, identity: 0.75 

ctggcaaagttcttaatgaatcctttgaagtt	CRISPR spacer
ttcgcaaagctcttaaagaatcctttccagac	Protospacer
.* ******.****** *********  ** .

40. spacer 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_020121 (Xylella fastidiosa subsp. multiplex strain Riv5 plasmid pXF-RIV5, complete sequence) position: , mismatch: 8, identity: 0.75 

ctggcaaagttcttaatgaatcctttgaagtt	CRISPR spacer
ttcgcaaagctcttaaagaatcctttccagac	Protospacer
.* ******.****** *********  ** .

41. spacer 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_020121 (Xylella fastidiosa subsp. multiplex strain Riv5 plasmid pXF-RIV5, complete sequence) position: , mismatch: 8, identity: 0.75 

ctggcaaagttcttaatgaatcctttgaagtt	CRISPR spacer
ttcgcaaagctcttaaagaatcctttccagac	Protospacer
.* ******.****** *********  ** .

42. spacer 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040800 (Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 plasmid pXFAS01, complete sequence) position: , mismatch: 8, identity: 0.75 

ctggcaaagttcttaatgaatcctttgaagtt	CRISPR spacer
ttcgcaaagctcttaaagaatcctttccagac	Protospacer
.* ******.****** *********  ** .

43. spacer 1.59|2149554|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040800 (Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 plasmid pXFAS01, complete sequence) position: , mismatch: 8, identity: 0.75 

ctggcaaagttcttaatgaatcctttgaagtt	CRISPR spacer
ttcgcaaagctcttaaagaatcctttccagac	Protospacer
.* ******.****** *********  ** .

44. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 8, identity: 0.75 

-aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
cggcca-gatcaccaccgccagaatcaggaaca	Protospacer
 ..***  **.************.*******

45. spacer 1.3|2146192|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 9, identity: 0.719 

tgcgcgtgtagggtgtgcccgatatcgagagc	CRISPR spacer
atagctgtcagggtgtgcccgatctcgtgagc	Protospacer
   **   .************** *** ****

46. spacer 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP031957 (Phaeobacter sp. LSS9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

accacttgaccgtccacttccagtgcgcattc	CRISPR spacer
gcaataccgccgtccacgtccagtgcgcagtc	Protospacer
.* *. . .******** *********** **

47. spacer 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP010682 (Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence) position: , mismatch: 9, identity: 0.719 

accacttgaccgtccacttccagtgcgcattc	CRISPR spacer
gcaataccgccgtccacgtccagtgcgcagtc	Protospacer
.* *. . .******** *********** **

48. spacer 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP010717 (Phaeobacter piscinae strain P18 plasmid pP18_b, complete sequence) position: , mismatch: 9, identity: 0.719 

accacttgaccgtccacttccagtgcgcattc	CRISPR spacer
gcaataccgccgtccacgtccagtgcgcagtc	Protospacer
.* *. . .******** *********** **

49. spacer 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP010768 (Phaeobacter piscinae strain P13 plasmid pP13_a, complete sequence) position: , mismatch: 9, identity: 0.719 

accacttgaccgtccacttccagtgcgcattc	CRISPR spacer
gcaataccgccgtccacgtccagtgcgcagtc	Protospacer
.* *. . .******** *********** **

50. spacer 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP010644 (Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence) position: , mismatch: 9, identity: 0.719 

accacttgaccgtccacttccagtgcgcattc	CRISPR spacer
gcaataccgccgtccacgtccagtgcgcagtc	Protospacer
.* *. . .******** *********** **

51. spacer 1.22|2147332|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_007410 (Trichormus variabilis ATCC 29413 plasmid A, complete sequence) position: , mismatch: 9, identity: 0.719 

ggtttctttttgagcaatgctctggcgatttt	CRISPR spacer
gcattctttttgagcaaagcactggcactaca	Protospacer
*  ************** ** *****. * .

52. spacer 1.22|2147332|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047243 (Trichormus variabilis 0441 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ggtttctttttgagcaatgctctggcgatttt	CRISPR spacer
gcattctttttgagcaaagcactggcactaca	Protospacer
*  ************** ** *****. * .

53. spacer 1.23|2147392|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017300 (Rhodococcus sp. YL-1 plasmid pYLC1, complete sequence) position: , mismatch: 9, identity: 0.719 

accgcagcacagatggatcaatgtctcctact	CRISPR spacer
gccgcagaacagatgcatcaatgttgcatctg	Protospacer
.****** ******* ********. * * .

54. spacer 1.24|2147452|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtgcaatggacttaactgaggtgatgttcga	CRISPR spacer
cagggtctggatttcactgaggtgatgttcac	Protospacer
*. *   ****.** ***************.

55. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

56. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042619 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

57. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028195 (Escherichia coli strain CFSAN018748 plasmid pGMI14-004_1, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

58. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024145 (Escherichia coli strain 14EC029 plasmid p14EC029d, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

59. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_017640 (Escherichia coli UMNK88 plasmid pUMNK88_Ent, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

60. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

61. spacer 1.37|2148233|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG904993 (Escherichia coli strain 14OD0056 plasmid p14ODTX, complete sequence) position: , mismatch: 9, identity: 0.719 

agcattcagcaaactttgacaactcaactggt	CRISPR spacer
tgataccggcaaactttgacaactcaggtggc	Protospacer
 *   .*.******************. ***.

62. spacer 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MG592485 (Vibrio phage 1.111.B._10N.286.45.E6, partial genome) position: , mismatch: 9, identity: 0.719 

attagatcgccgcgcttagcaccgcaatctat	CRISPR spacer
ccggagttgccgcgcttagcactgtaatctat	Protospacer
 . ...*.**************.*.*******

63. spacer 1.42|2148533|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MG592484 (Vibrio phage 1.111.A._10N.286.45.E6, partial genome) position: , mismatch: 9, identity: 0.719 

attagatcgccgcgcttagcaccgcaatctat	CRISPR spacer
ccggagttgccgcgcttagcactgtaatctat	Protospacer
 . ...*.**************.*.*******

64. spacer 1.45|2148713|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_019746 (Gloeocapsa sp. PCC 7428 plasmid pGLO7428.01, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaactcctgcactgagtgaatttgatgttga	CRISPR spacer
acaactcctggactgggtgaatttatcagtgg	Protospacer
.********* ****.********. .. **.

65. spacer 1.48|2148893|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to AP022674 (Sphingomonas sp. HMP9 plasmid pHMP9 DNA, complete sequence) position: , mismatch: 9, identity: 0.719 

tcgacctagtcgcggcacttgttgatgttcat	CRISPR spacer
ctcgcccaatcgcggcacttgttgatggcaat	Protospacer
.. .**.*.****************** . **

66. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MH590593 (Mycobacterium phage Rabinovish, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

67. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MT723944 (Mycobacterium phage ChaylaJr, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

68. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MN276192 (Mycobacterium phage Trinitium, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

69. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to MK359330 (Mycobacterium phage Iota, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

70. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to KX369583 (Mycobacterium phage Littleton, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

71. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to DQ398053 (Mycobacteriophage Catera, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

72. spacer 1.60|2149614|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_008207 (Mycobacterium phage Catera, complete genome) position: , mismatch: 9, identity: 0.719 

aaccaccattaccaccgccagagtcaggaagt	CRISPR spacer
ttcgacaattaccaccggcagagtcagaacac	Protospacer
  * ** ********** *********.* ..

73. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to AP013554 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S23-C36, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces) position: , mismatch: 9, identity: 0.719 

ctacttg---tttcttttttgtaaccacctttaca	CRISPR spacer
---tctgggttttcttttttataaccatctttaat	Protospacer
   ..**   **********.******.*****

74. spacer 1.4|2146252|32|NZ_CP016987|CRISPRCasFinder,CRT matches to CP003957 (Rhodococcus opacus PD630 plasmid 8, complete sequence) position: , mismatch: 10, identity: 0.688 

accacttgaccgtccacttccagtgcgcattc	CRISPR spacer
ttgtcgagaccgtccacttcgagtgcgtatgt	Protospacer
 .  *  ************* ******.** .

75. spacer 1.8|2146492|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ttgggttgtcagggtctggaactggctcaact	CRISPR spacer
gagggttatcagggtctggatctggtggcaga	Protospacer
  *****.************ ****.   *

76. spacer 1.8|2146492|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NC_011981 (Agrobacterium vitis S4 plasmid pAtS4e, complete sequence) position: , mismatch: 10, identity: 0.688 

ttgggttgtcagggtctggaactggctcaact	CRISPR spacer
gctggtggtcagggtctggaacaggcgaggcc	Protospacer
 . *** *************** ***  ..*.

77. spacer 1.21|2147272|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to JQ010983 (Thermococcus prieurii virus 1, complete genome) position: , mismatch: 10, identity: 0.688 

ggaggatgtagcgctcgttgtctctttcgtct	CRISPR spacer
cagggaagtagcgctcgttgtcttttattgcc	Protospacer
 ..*** ****************.** .  *.

78. spacer 1.43|2148593|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to KT351738 (Uncultured bacterium plasmid Drgb7, complete sequence) position: , mismatch: 10, identity: 0.688 

agctgacgcaatgaaggaggcatttgatttat	CRISPR spacer
ggctgccgccatgaaggaggcattcaagcgga	Protospacer
.**** *** **************..* . .

79. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to AP013397 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C46) position: , mismatch: 10, identity: 0.688 

ctacttgtttcttttttgtaaccacctttaca	CRISPR spacer
tcgtatgtatcttctttgtaaccaccttgagt	Protospacer
.... *** ****.************** *

80. spacer 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to AP014018 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C106A-MedDCM-OCT-S35-C77, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688 

aaccaccgttaccaccgccagaatcaggaagt	CRISPR spacer
caccaccgccaccaccgccagaattaatgcca	Protospacer
 *******..**************.*. .

81. spacer 1.65|2149914|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to AP014019 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C106A-MedDCM-OCT-S39-C83, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688 

aaccaccgttaccaccgccagaatcaggaagt	CRISPR spacer
caccaccgccaccaccgccagaattaatgcca	Protospacer
 *******..**************.*. .

82. spacer 1.66|2149974|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 10, identity: 0.688 

atttggctgtcgatgattttcacggtctcttt	CRISPR spacer
gtgtggccgtcgatgattttcgcggtgcgccc	Protospacer
.* ****.*************.**** . ...

83. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_015712 (Clostridium perfringens plasmid pCPPB-1, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaagaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

84. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_011412 (Clostridium perfringens plasmid pCP8533etx, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

85. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009558 (Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

86. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_019687 (Clostridium perfringens plasmid pCpb2-CP1, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

87. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025503 (Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

88. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023413 (Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

89. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_007773 (Clostridium perfringens plasmid pCPF5603, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

90. spacer 1.44|2148653|32|NZ_CP016987|CRISPRCasFinder,CRT,PILER-CR matches to NC_019257 (Clostridium perfringens plasmid pJIR3844, complete sequence) position: , mismatch: 11, identity: 0.656 

gatggcgtaaatcactggagtgaaagctatga	CRISPR spacer
agctaaaaaaatcactggtgtaaaagctatgg	Protospacer
... . . ********** **.*********.

91. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 11, identity: 0.656 

ctacttgtttcttttttgtaaccacctttaca	CRISPR spacer
agcaatgtttcttctttgtaaccaacttcttt	Protospacer
     ********.********** ***. .

92. spacer 1.63|2149794|32|NZ_CP016987|CRISPRCasFinder,CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 11, identity: 0.656 

ctacttgtttcttttttgtaaccacctttaca	CRISPR spacer
agcaatgtttcttctttgtaaccaacttcttt	Protospacer
     ********.********** ***. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 664849 : 671466 7 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_2 1183734 : 1215233 47 Vibrio_phage(50.0%) lysis,terminase,integrase attL 1172287:1172302|attR 1197167:1197182
DBSCAN-SWA_3 1814936 : 1871558 51 Catovirus(10.0%) transposase,tRNA,protease NA
DBSCAN-SWA_4 2228635 : 2235828 9 Anguillid_herpesvirus(16.67%) NA NA
DBSCAN-SWA_5 2366175 : 2375402 10 Leptospira_phage(28.57%) transposase NA
DBSCAN-SWA_6 2551883 : 2559150 6 uncultured_Mediterranean_phage(33.33%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage