CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017086	Proteus mirabilis strain T18 plasmid pT18, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP017085	Proteus mirabilis strain T18 chromosome, complete genome	5 crisprs	c2c9_V-U4,TnsE_C,DEDDh,cas3,DinG,PD-DExK,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	0	23	11	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

319 : 56086

Escherichia_phage(30.77%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|319_1024_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014343468.1\|1063_1537_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
WP_013213985.1\|1659_2640_+\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
WP_004199234.1\|2915_3797_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_013213989.1\|5656_6082_-	antirestriction protein	A0A2D0W8Z5	Bordetella_virus	5.3e-17	37.3
WP_013213990.1\|6192_6471_-	hypothetical protein	NA	NA	NA	NA
WP_001161490.1\|8013_8574_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
WP_001138014.1\|8577_11544_+\|transposase	Tn3-like element TnAs1 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	100.0
WP_020319858.1\|12617_12755_+	hypothetical protein	NA	NA	NA	NA
WP_001749973.1\|12763_13480_+	StdB	NA	NA	NA	NA
WP_000414913.1\|13481_13850_+	hypothetical protein	NA	NA	NA	NA
WP_048968061.1\|14142_14376_+	hypothetical protein	NA	NA	NA	NA
WP_001749971.1\|14486_14807_-	hypothetical protein	NA	NA	NA	NA
WP_000214483.1\|14861_15041_-	hypothetical protein	NA	NA	NA	NA
WP_000129958.1\|15767_16277_-	antirestriction protein ArdA	NA	NA	NA	NA
WP_000932975.1\|17163_17403_-	hypothetical protein	NA	NA	NA	NA
WP_000881513.1\|17412_17817_-	hypothetical protein	NA	NA	NA	NA
WP_000447669.1\|17874_18300_-	hypothetical protein	NA	NA	NA	NA
WP_000861760.1\|18714_19155_+	translesion error-prone DNA polymerase V autoproteolytic subunit MucA	A0A1W6JNS2	Morganella_phage	1.2e-27	48.8
WP_001749980.1\|19142_20408_+	translesion error-prone DNA polymerase V subunit MucB	F1C5A5	Cronobacter_phage	2.2e-119	53.8
WP_001452808.1\|20558_21350_+\|protease	zinc metalloprotease	NA	NA	NA	NA
WP_000057569.1\|21364_21706_-	hypothetical protein	NA	NA	NA	NA
WP_001749982.1\|22265_22985_+	replication initiation protein	I3WF20	Macacine_betaherpesvirus	8.6e-20	28.9
WP_001749988.1\|23714_24284_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
WP_001067855.1\|24612_25317_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001044210.1\|25322_25463_+	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|25948_26686_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|26682_26907_+	hypothetical protein	NA	NA	NA	NA
WP_000954592.1\|27028_27205_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_000427619.1\|27386_28391_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_042863651.1\|28469_31436_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.8
WP_001067855.1\|31556_32261_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000205770.1\|32505_33252_+	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	4.2e-09	30.9
WP_000139328.1\|33306_33867_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_015059022.1\|33998_34199_+	hypothetical protein	NA	NA	NA	NA
WP_032083981.1\|34584_35184_+	hypothetical protein	NA	NA	NA	NA
WP_001736714.1\|35347_35578_+	hypothetical protein	NA	NA	NA	NA
WP_001312851.1\|35882_36032_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_000083837.1\|36315_36564_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_001375168.1\|36808_36883_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_032495102.1\|36875_37733_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_000616807.1\|38671_39325_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000557619.1\|39417_39675_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_001398199.1\|39607_40009_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_001067855.1\|41319_42024_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_013188475.1\|42534_43410_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
WP_013362812.1\|43444_44413_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.6e-186	100.0
WP_001067855.1\|46163_46868_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071557810.1\|48539_48680_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|48670_49375_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_012372818.1\|49824_50580_-	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
WP_000027057.1\|50749_51610_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_064441864.1\|51792_52329_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.8e-84	100.0
WP_000957857.1\|52420_52609_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|53286_53991_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014839980.1\|54376_54793_+	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
WP_014839979.1\|54797_55316_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|55381_56086_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017085

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017085_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017085_1

319022-319161

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

TnsE_C

The CRISPR arrays of NZ_CP017085_1

>merge|NZ_CP017085|1|319022-319161|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP017085|1|1|319022-319161|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017085.1\|WP_004249808.1\|324690_325095_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP017085.1\|WP_000497519.1\|317905_318232_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP017085.1\|WP_001271300.1\|313193_313571_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_096058085.1\|317254_317791_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP017085.1\|WP_000119696.1\|313980_314352_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_017628743.1\|323488_324616_+\|TIGR03364-family-FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132407
NZ_CP017085.1\|WP_000777554.1\|316449_316923_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127
NZ_CP017085.1\|WP_063073812.1\|327185_328319_+\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349881
NZ_CP017085.1\|WP_001353740.1\|318419_318659_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP017085.1\|WP_001243518.1\|309819_311346_+\|transposase	unknown	unknown	gnl\|CDD\|377670
NZ_CP017085.1\|WP_023843642.1\|322416_323424_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP017085.1\|WP_000704156.1\|315830_316355_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181
NZ_CP017085.1\|WP_017628742.1\|325122_325410_-\|YjeO-family-protein	unknown	unknown	gnl\|CDD\|337858
NZ_CP017085.1\|WP_004246570.1\|328328_329735_+\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP017085.1\|WP_000251879.1\|311346_312963_+\|transposase	TnsE_C	TnsE	gnl\|CDD\|376049
NZ_CP017085.1\|WP_001206315.1\|314984_315773_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	unknown	unknown	gnl\|CDD\|184296
NZ_CP017085.1\|WP_012368613.1\|325498_326311_-\|phosphonoacetaldehyde-hydrolase	unknown	unknown	gnl\|CDD\|184075
NZ_CP017085.1\|WP_017628744.1\|320676_322368_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP017085.1\|WP_012368614.1\|329827_330466_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|172294
NZ_CP017085.1\|WP_004249814.1\|319587_320664_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496

Protein	Function_ID	Function_description	E-value
NZ_CP017085.1\|WP_004249808.1\|324690_325095_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	6.90543e-32
NZ_CP017085.1\|WP_000497519.1\|317905_318232_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP017085.1\|WP_017628743.1\|323488_324616_+\|TIGR03364-family-FAD-dependent-oxidoreductase	gnl\|CDD\|132407	TIGR03364, putative_secreted_oxidoreductase, FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.	5.09954e-149
NZ_CP017085.1\|WP_004249814.1\|319587_320664_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP017085.1\|WP_096058085.1\|317254_317791_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.12151e-71
NZ_CP017085.1\|WP_000777554.1\|316449_316923_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57
NZ_CP017085.1\|WP_063073812.1\|327185_328319_+\|M20-family-metallopeptidase	gnl\|CDD\|349881	cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme. Peptidase M20 family, Glutamate carboxypeptidase (carboxypeptidase G; carboxypeptidase G1; carboxypeptidase G2; CPDG2; CPG2; Folate hydrolase G2; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase; E.C. 3.4.17.11) subfamily. CPDG2 is a periplasmic enzyme that is synthesized with a signal peptide. It is a dimeric zinc-dependent exopeptidase, with two domains, a catalytic domain, which provides the ligands for the two zinc ions in the active site, and a dimerization domain. CPDG2 cleaves the C-terminal glutamate moiety from a wide range of N-acyl groups, including peptidyl, aminoacyl, benzoyl, benzyloxycarbonyl, folyl, and pteroyl groups to release benzoic acid, phenol, and aniline mustards. It is used clinically to treat methotrexate toxicity by hydrolyzing it to inactive and non-toxic metabolites. It is also proposed for use in antibody-directed enzyme prodrug therapy; for example, glutamate can be cleaved from glutamated benzoyl nitrogen mustards, producing nitrogen mustards with effective cytotoxicity against tumor cells.	4.25378e-158
NZ_CP017085.1\|WP_001353740.1\|318419_318659_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP017085.1\|WP_001243518.1\|309819_311346_+\|transposase	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	3.84193e-14
NZ_CP017085.1\|WP_023843642.1\|322416_323424_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP017085.1\|WP_000704156.1\|315830_316355_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19
NZ_CP017085.1\|WP_017628742.1\|325122_325410_-\|YjeO-family-protein	gnl\|CDD\|337858	pfam10840, DUF2645, Protein of unknown function (DUF2645). This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.	2.113e-18
NZ_CP017085.1\|WP_004246570.1\|328328_329735_+\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	4.57307e-113
NZ_CP017085.1\|WP_000251879.1\|311346_312963_+\|transposase	gnl\|CDD\|376049	pfam18623, TnsE_C, TnsE C-terminal domain. The bacterial transposon Tn7 facilitates horizontal transfer by directing transposition into actively replicating DNA with the element-encoded protein TnsE. Structural analysis of the C-terminal domain of TnsE identified a central V-shaped loop that toggles between two distinct conformations. It is suggested that a conformational change within the C-terminal domain of TnsE underlies target site selection by regulating stable engagement of the target DNA while providing a signal for activating transposition.	6.8797e-67
NZ_CP017085.1\|WP_001206315.1\|314984_315773_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	1.61477e-174
NZ_CP017085.1\|WP_012368613.1\|325498_326311_-\|phosphonoacetaldehyde-hydrolase	gnl\|CDD\|184075	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional.	1.04211e-159
NZ_CP017085.1\|WP_017628744.1\|320676_322368_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP017085.1\|WP_012368614.1\|329827_330466_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|172294	PRK13756, PRK13756, TetR family transcriptional regulator.	1.55732e-27

>NZ_CP017085.1|WP_001353740.1|318419_318659_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP017085.1|WP_000497519.1|317905_318232_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP017085.1|WP_096058085.1|317254_317791_+|tyrosine-type-recombinase/integrase
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDSKGGKSRNSLLPTRLIPAIK
>NZ_CP017085.1|WP_000777554.1|316449_316923_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP017085.1|WP_000704156.1|315830_316355_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP017085.1|WP_001206315.1|314984_315773_-|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1
MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK
>NZ_CP017085.1|WP_000119696.1|313980_314352_-|hypothetical-protein
MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELDNAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATYFSPNGQLVGLVAYIDAEWMDE
>NZ_CP017085.1|WP_001271300.1|313193_313571_-|hypothetical-protein
MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSFDHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAALKNSLDYYYGSSVIPPQNHGGYL
>NZ_CP017085.1|WP_000251879.1|311346_312963_+|transposase
MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTRFTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQSSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDHLEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESWCFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAGDGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRARKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAFDELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLEVDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGVNHPKGLGELQVSREDMEGWAERVVREQFTH
>NZ_CP017085.1|WP_001243518.1|309819_311346_+|transposase
MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVATLGLPSHLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQAQGAVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALPYCPKHGALVFFDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTALAAYIAPLLDAPRAQELSPSLEQWTLFYQRLAQDLGLTKSKHIRHDLVAERVRQTFSDEALEKLDLKLAENKDTCWLKSIFRKHRKAFSYLQHSIVWQALLPKLTVIEALQQASALTEHSITTRPVSQSVQPNSEDLSVKHKDWQQLVHKYQGIKAARQSLEGGVLYAWLYRHDRDWLVHWNQQHQQERLAPAPRVDWNQRDRIAVRQLLRIIKRLDSSLDHPRATSSWLLKQTPNGTSLAKNLQKLPLVALCLKRYSESVEDYQIRRISQAFIKLKQEDVELRRWRLLRSATLSKERITEEAQRFLEMVYGEE
>NZ_CP017085.1|WP_004249814.1|319587_320664_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MLQFNINSQNGSMPHIRVENIQKRFNQFIALDGVSLEIKQGELVCLLGPSGCGKTTLLRCIAGLETQDHGSIFNYDNNISHLPPQARDYGILFQSYALFPNLTVQQNIAYGLAGQPRNVIKDRVNEMLELVGLQDRKKKYPGELSGGQQQRVALARALAPAPSLLLLDEPMSALDAQVREHLCVELRNLQQSLNITTLMVTHNQDEAMLMADRIAVMNNGKVEQYGSSEEIYNHPQTPFVAEFVGKGNWLPFNRNQHGEAMIGSREVQLKHTAIPHNQGRLFCRPESIKINPIQNKHNQYDANIQNVVFLGSRCIMKFELDHLPGHLLQAEISAAELHSIQNGKVKVTLPANELHIFA
>NZ_CP017085.1|WP_017628744.1|320676_322368_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MSVIVPTKSINRLDSLFVAGGKLFIICLLTLGVLLPLLAIFWRGFTPDISQGGGFQAAIDLFTSANFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSLWRGISLLPLLAPSMLPGIALVYLFGNQGLLRSLLTENIYGYWGLVLGEVIYTFPHALMILLSALSMSDARLFDAASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKAVLGQQQFGRGALIGMLLLLPALLTFGVDVWLRKRQRDAMSSRAQFYLPKANFQRDTLYLIFVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLPGGWLAYTNSIILAFYTATIGCFLIFMGAYLIEKTASHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNPLNFLYGSMVLLVLCSIAHFFTTAYMTASTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPALLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGVSILLSIASQGVLRRTQAWHQREAKQ
>NZ_CP017085.1|WP_023843642.1|322416_323424_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MLKKLILATSLLFSAGTVFAATEITVYTAIESEQLQAYKQAFEAKYPDIKIKWVRDSTGIITAKLLAEKDRPQADVVWGLAASSLAILKAQNMLEPYAPAQLDDIDVKFRDSNNPPTWVGMDVWAATICYNTIEAQKLGLSKPTSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQIFGEQEGWAYMDKLHQNIGQYVHSGSKPCKMAASGEYPIGISFEYPALQLKRQGAPLDIILPQEGLGWDIEATAIIKGTNKRDAAQKLADFSASKEAMKLYSANFAVLANTSVPVSQTELPRDYAQRLIKNDFIWAAEKRDTILTEWRKRYDGKSAK
>NZ_CP017085.1|WP_017628743.1|323488_324616_+|TIGR03364-family-FAD-dependent-oxidoreductase
MKFDIAVIGAGIIGLSHAYAAAQRGLRVAIFERSYTPVGASVRNFGHGLILGQAPGKMLDLAKNSREIWATMAKQAKFLTRQKGTYLLARTQSEQAVLEAFVDGRAKTYGYDCELLSKTQLAMVYGGQLQHHKAALHGKEDQVLFSREAIPQLAAYLGSLANVTSYFSTLVRDIDVDTGTLITSNGTFSAEKIIVCSGHDYQTLLADEIKKLDPIVCRLQMLRVTAEQNIGLAHALMTGLSCTHYGAFADLPEAQALAKEIKMQSPLIEQYGIHLLITPTPYGDLIIGDSHEYSLDAQPFNSEEVDNLLIELAEHTLGCSVQVKERWQGVYGAKGKEPISILTPSEKVTAVLMRTGLGMSVGPGLGEQNIRQLFD
>NZ_CP017085.1|WP_004249808.1|324690_325095_-|DUF1240-domain-containing-protein
MVKINSLKMYLIAIFLFSLALFCFYDSIIYYKNYFMMKDRILFSFQTGLFFFAAPLIIYFSYLIFICGYTKKTQRMNNKVAGICTGIAIVGIVFSFFFSIYVALDLTSKGYFSCYKSSAFAPNEYVIAKEMCKK
>NZ_CP017085.1|WP_017628742.1|325122_325410_-|YjeO-family-protein
MKIILRTFIFLYFIFLLILINILSISDYEWMIGEGDIDNLCQLPLNGRYVIEPILILIPCILLLFLEKNKKLRWGYVTITVMYIIWSFYLRFNFC
>NZ_CP017085.1|WP_012368613.1|325498_326311_-|phosphonoacetaldehyde-hydrolase
MNKSVEAVILDWAGTVVDFGSFAPTQIFVDAFAQAFNFKISLSEARGPMGMGKIDHIRALLNEPNIRTRWTAQFGHPPSEEEAQHIYRTFMPLQIAQVVHFAKPIEGALEAISTIRAQGIKIGSCSGYPKAVMDVLVPKAAEYGYQPDCVVASDEIAAGSRPGPWMALKNVIELGVMSVAHCVKVDDAVTGIAEGLNAGMWTVGLSVSGNEFGATFEQYQTMEQAEIENRKRIAENKLRTAGAHYIIDTLANLPAVIEDINQRIANNQKP
>NZ_CP017085.1|WP_063073812.1|327185_328319_+|M20-family-metallopeptidase
MQHTINSQYDEMVDFLKELVNIDSGSYDKQGVDTVADLLIQRYQKLGFVVEVFENEQLGNNYRLVNKDATNPQIFIAAHLDTVFPKGTVAERPFSIDGSRAYGPGVIDMKASHVLTYYAINALKQSGDLSYQNVEILLNCDEEIGSKTSRHLIEKYAKNKAYALIMEPARANGAIVSARRGVGTYELLIEGKASHSGIAPEAGISAIQELSYKIQALHALSRHDEGLSVNVGLISGGTSVNTVAPHARAEIDVRISTDEQGIEIDKQVREVCSQPVLAGVKLTLKGGINRPPMVKTPESANLIEIIKQQADLIGLAIEDISTGGGSDASFTAGVGTPSVDGLGPIGGYQHSDKEYLDLPSLTERTVLFANVIKRLSQ
>NZ_CP017085.1|WP_004246570.1|328328_329735_+|YfcC-family-protein
MEKSKKIKWAMPDAFIIIFGIVILAAIATYLIPAGSYQRETVNGLNRVVPNSFNYVAQNPASLMDVFYAIPVGLKQSASIIFLIFMIGGAIAIYDRTRAIDSGINALIVKTKGNYQALIITVAFIFGMLSSLGLAANAVIAFIPIGIALSRSMKLDAITGVAVVYLGYYAGNAVGVLDPTILGTAQTLAEVPLFSGVIFRVVLFAILIVVTIAYIVWYARRIANDPTTSYMYGIAKDDPDYEQPHTQSLDSTFSLRQKLSLVVFIAFIGLFLYGAFEYKWGIEHLSAIFIMMSIVVAAMFKIAPNDYIKTFMKGAQSLVYGALVVGIARAVIVILDEGRVLDSIVQATLVPLQQTSHFWGAQLLYFFNLLFNLLVTSGTGQASIVMPIMVPILDILDLTRQTGVLILKLGDGFTNIITPTSGVLMAVLAVGKVPWTRWVKFVFPILMIWVVIGMAAIGIATAISYGPV
>NZ_CP017085.1|WP_012368614.1|329827_330466_-|TetR-family-transcriptional-regulator
MKSPKIDRLNVLDTALSLLEKEGIEGLTMRKLADALHIKAASLYWHFDNKQTLIEGMADRIVSEVAVDFHYSQDWKADLKRLATELREAFLQHRDGARVFAGTYVISENVLRINNTLITLIMQSGASAELASNMSMTLLYFILGCCIEQQAITLIDSEILMQKRLAFEQIVRDKYPQTWQVREILFADDFAMRFNFGLEQLVTGFEHQLKTP

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Crispr_ID: NZ_CP017085_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017085_2

2837880-2838035

Orphan

Consensus_repeat	Method
ATAATTGCCTTTAGGTTGATATTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP017085_2

>merge|NZ_CP017085|2|2837880-2838035|CRISPRCasFinder
ATAATTCCCCTTAGGCTGATATTTACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAAATAATTGCCTTTAGGTTGATATTTATTATCAGATTCCGTTTTCGTATAGGATGCACCCACTAATGCATAATTGCCTTTGGGTTGATAATT

>NZ_CP017085|2|1|2837880-2838035|CRISPRCasFinder
ATAATTCCCCTTAGGCTGATATTT	ACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAA
ATAATTGCCTTTAGGTTGATATTT	ATTATCAGATTCCGTTTTCGTATAGGATGCACCCACTAATGC
ATAATTGCCTTTGGGTTGATAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017085.1\|WP_012368088.1\|2846153_2846606_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_004243627.1\|2845635_2846094_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_004243611.1\|2835278_2836055_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|225839
NZ_CP017085.1\|WP_004243612.1\|2836170_2836713_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP017085.1\|WP_017628011.1\|2838775_2839432_-\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354
NZ_CP017085.1\|WP_004250719.1\|2842758_2843247_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_004243621.1\|2840949_2841642_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375779
NZ_CP017085.1\|WP_004243606.1\|2830598_2831855_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP017085.1\|WP_004243623.1\|2842425_2842746_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_004243617.1\|2840608_2840953_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_012368079.1\|2826659_2827517_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|180656
NZ_CP017085.1\|WP_004243604.1\|2827703_2828282_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308
NZ_CP017085.1\|WP_004243609.1\|2834657_2835275_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP017085.1\|WP_004250737.1\|2826036_2826597_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP017085.1\|WP_017628009.1\|2843249_2845553_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP017085.1\|WP_017628014.1\|2828361_2829999_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_017628013.1\|2837281_2837461_+\|GhoT/OrtT-family-toxin	unknown	unknown	gnl\|CDD\|371222
NZ_CP017085.1\|WP_012368081.1\|2832207_2834646_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006
NZ_CP017085.1\|WP_004243622.1\|2841644_2842457_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_017628010.1\|2839428_2840616_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377414

Protein	Function_ID	Function_description	E-value
NZ_CP017085.1\|WP_004243611.1\|2835278_2836055_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.76747e-46
NZ_CP017085.1\|WP_004243612.1\|2836170_2836713_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	1.54842e-89
NZ_CP017085.1\|WP_017628010.1\|2839428_2840616_-\|hypothetical-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.13292e-07
NZ_CP017085.1\|WP_004243621.1\|2840949_2841642_-\|hypothetical-protein	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.64931e-18
NZ_CP017085.1\|WP_004243606.1\|2830598_2831855_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.66678e-32
NZ_CP017085.1\|WP_012368079.1\|2826659_2827517_-\|D-amino-acid-transaminase	gnl\|CDD\|180656	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed.	3.22889e-127
NZ_CP017085.1\|WP_004243604.1\|2827703_2828282_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.20798e-64
NZ_CP017085.1\|WP_004243609.1\|2834657_2835275_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	3.56619e-91
NZ_CP017085.1\|WP_004250737.1\|2826036_2826597_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.86135e-15
NZ_CP017085.1\|WP_017628009.1\|2843249_2845553_-\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	0.00232344
NZ_CP017085.1\|WP_017628013.1\|2837281_2837461_+\|GhoT/OrtT-family-toxin	gnl\|CDD\|371222	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT. GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.	7.72766e-13
NZ_CP017085.1\|WP_012368081.1\|2832207_2834646_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0
NZ_CP017085.1\|WP_017628011.1\|2838775_2839432_-\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	7.61436e-72

>NZ_CP017085.1|WP_017628013.1|2837281_2837461_+|GhoT/OrtT-family-toxin
MSVIATIGIGYLIGAVLSFIITFFLTKDPSLAMRLLSAFLIAITWPLSFPMAIIFSIFG
>NZ_CP017085.1|WP_004243612.1|2836170_2836713_-|DUF924-domain-containing-protein
MVPYQPVLTFWFEECTPKQWFQKDSAFDKEIKDRFGELCISASRAELASWRESIEGRLGEIIILDQFSRNIWRDTPKAFAQDNMALILAQEAIRLPEYLTLTPVKRKFLIMPFMHSESQKIHQDAIALFSQLNDDDTYQYELRHKEIIDKYGRYPHRNEILGRTSTPEELAFLQQPGSSF
>NZ_CP017085.1|WP_004243611.1|2835278_2836055_+|dimethyl-sulfoxide-reductase-anchor-subunit
MHELPLVFFTVLGSSAAGLFLIAYISKKLGQIDEQQLRNANILALILMLVGLGIGGLHVGQPLRFFNMLLGVGRSPMSNEAFLSGVFTGFAFATVALTIMKKWRGLREICNLFTVIFGLAFVWSIPQVYHIPTIANWNTDYTTLQFWMTLLIGGGVLAMVSGARRLGALSFIIGAIITFAARSGYVSFLSFNGPELSAEQSLFWGFQLAVLALGIVVVGFSALKAQTSKVTLATCAAAVVIAELSGRIAFYNLWHITM
>NZ_CP017085.1|WP_004243609.1|2834657_2835275_+|dimethylsulfoxide-reductase-subunit-B
MKQYGFYFDSTKCTGCKTCQVSCKDEKDLDLGPKFRRVYEYGGGSWAKQDGIWTQNIYSYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDEKKKLMSKCDGCYERVAQGMKPVCVESCPQRALDFDDIEVIRAKHGTECGIAPMPDPSLTNPNIVIKAHKDAKPSGDKTGSVQNAAEV
>NZ_CP017085.1|WP_012368081.1|2832207_2834646_+|molybdopterin-dependent-oxidoreductase
MSMSKIKNNVSITEMSRRGFIQSAAVLSGAAAVAGTVSLPFSANAQTPQGIRPDETSETIKYSACLVNCGSRCPLKVHVKDGVIRRISNETMFDDSTFGLHQIRPCLRGRSVRWKTYNPDRLKYPMKRVGKRGEGKFERISWDEATSIIADKLKYTIDTYGNEAIYYQYGTGSTGANLHGRTACKRLLSTVGGFLSDYGTYSYSQLTGIVPYVYGDMLESLLTEIENSDLVVMFGHNLAETRMSGGGQFYETLNALDKSKSKVIIIDPRRTDSVTTLGAEWIPIYPGTDAALVAALGYVMIQEGITDEAFLREYCIGWDKQTLPASAPENGSYKDYILGNGPDGIAKTPEWASQLTGISVARIIQLAREIGNARAAWISQGWGIQRTSNGEQACRAIMMLPLMSGHIGRPGTNTGCWGGSIEYPVASFAIPNPVKTQIPTFMWSEAVARGEELTSKNAGVRNKDKLDTGIKFMWCYSSNVIGNQHADLNKTHELLQDESKCEFILVWDNHMTPSAKYADILLPDVTTVETNDLINNSYASGAYHYMVRLQNAIEPLWENRPNYDVLADIAEKLGVKEKFTEGRTYQEWIEYCYNQVKANNPALPSFAETNDMGIVDRKLPPRSAYVALEAFRQDPIANPLKTASGKIEIYSEKLMQDTEGWILPEGDRIPAIPEYCKNEEGVENVTLKEKFPLQMTGFHDKGHVHSTYFNVAMLREAIPHQFWLNPVDAAQRGLKSGDIAEIYNERGRLHIRVKVTDRVLPGVIAVPQGAWRSLDTTGVDTGGCINTLTSWHPSPFAKGNPQHTNLVEVKRA
>NZ_CP017085.1|WP_004243606.1|2830598_2831855_+|mechanosensitive-ion-channel-family-protein
MQQQLLTWIRQFNEEYAQITSLLLVLLIIFVVALVLHFILHKLVLPKLSKAISKYDQKWQLSFEINKLFSRFAFLIQGVVINIQALLWMGPGKTQEILTTTAQAWCLLFGLLMIFSIMDLCLQIMRNSPSFGRLPLRGIFQSLKLVASVLIGIMIVSLLIGKSPLILLSGLGAMTAVLMLVFKDPIMGLVAGIQLSANNMISLGDWLEMPKYGADGAVVDISLTTVKVRNWDNTVTTIPTYSLISDSFKNWQAMTQSGGRRIKRSLSLDINSIYFLDQENIDKLEKAQLLEPYIKSKVGEISSYNASLCHDHQMPLNQRGMTNVGTFRAYVEAYLKNHPKIHKQMTIMVRQLAPTSEGLPIEIYAFTNTTVWVEYEAIQSDIFDHIFAILPQFGLRIHQSPTGSDVRALKFPTNIDTP
>NZ_CP017085.1|WP_017628014.1|2828361_2829999_-|hypothetical-protein
MTIETKEERLQKILTAENCKDTAKTPPKPVHPQADEPDTDPDKNTVTEIKYNQIKSSPDEPGNEVKMNGIISYEVEVKDSDLRLAQWSTNPKGILILPNNKDVYTTIVDDHKTKISLTGNRSGVASLQLILRDEDNEDNAYYAPPLQIRVTPAIPNTDCSAANCERFDDLLTINSESMQWPSKWEEVSKSFVVHLQSQEGEDMQNKEVTLVYDKDNSTLLTQPEIYNSEGELSNISKTNKYGIANFKVRFKGTEPKQIAVFYAESENSEDIDNPLKSRNYYVEMTTEKLPSPKVPATLNGILSYHSENYCVNANLILGRDISESTQVGFYFNDQLKMLPCTDKSAVSVRLENQALTNGVHYISFFTVDIFNNICFSRRERIIVDNSLTGECGKQIKNIAPKPCISVTIPQICDRYFNSVNIRLVPSLCLQIKNRVAKLDIQKMVIIFNGYTKVNSSERTLVYRSTLEIYADDPRLGDFLQDTTPSNEPISMIEISEPALESILADALPNIEVGQLGIQVMVFEKNGNCYLCGENMYTVSLRLPCA
>NZ_CP017085.1|WP_004243604.1|2827703_2828282_+|HdeD-family-acid-resistance-protein
MLDINKNNLSQLTEKLVKKQCTLMSIIAMLGLLAGIICIINPFSSGVVVSVFLGVVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIKDSFYGWFNILVGFLDLVLAYFLLAFGPETSITLVMALIGIQLILSSITILSIASAIKRMTR
>NZ_CP017085.1|WP_012368079.1|2826659_2827517_-|D-amino-acid-transaminase
MSEIVYLNNQFVPKEQANISVFDRGFLFADAVYEVTAVINGQLIDFEGHFQRLQRSCKALSMPFSLTKEQLKEIHRQLIDKNHLHEGLIYLQVTRGADSSRFFDFPSSLVAPTLVLFVQHSTVVNHPNASKGISVVSVEDIRWQRCDIKTVALLAACLAKHHAHQQGADDAIFIKEGYITEGSSSNFFIVNQQDEIITRPLSQDILPGITRQAIIQLAKEQKLTIIERLFTLEEAKQAKEAFISSATTLIWPVISIDNEKINQGKVGALSQRLREIYLEKAGVKP
>NZ_CP017085.1|WP_004250737.1|2826036_2826597_+|helix-turn-helix-transcriptional-regulator
MSSPSAPIEIISQSIARERKKAGLSLAEIARRAGIAKSTLSQLEAGQGNPSIETLWAICVALNIPFSQLISSPKPEVKVIRKGDGFKISAEKAYYHAFLLSSCPNGAKRDIYTVIAQPGKDRVSDPHSKNVTEHILIISGRAIVGTLDNQQELSPGDYICYPGDVTHVLRALEPDTTAVMIIEHHN
>NZ_CP017085.1|WP_017628011.1|2838775_2839432_-|DUF2612-domain-containing-protein
MNIQQFDYHSDLLQAILWQYENADKLKSLAHFKADYFHQSTVLFWQNWYRDIFNIDTANDFGLAVWGRILDVPLGIDISPSEKTKIGFGFGKKKANFNANFRRNTDYTLSLTLDQKRMLIRMRYFNLTQSPTVTNINQFLKRFFWRGESKVFVLDPFDMTYMYYVFNFNPDERLRLLLENFDLMPRPSGVGVKYRIITKKAFGYGSYRKNFLKSNFGE
>NZ_CP017085.1|WP_017628010.1|2839428_2840616_-|hypothetical-protein
MADYRYINNKGVIVPDTAALRKEVEDEFRTVFGQSINLSPETPQGVLATMEIENRDAIVRNNAELANQINPDIAGGIFLDAIWALMGGERINATHSYLSNVEFMGVPGTIIPKGSQALTINGAVFETLTSLIIADTGKITGDMRAKEYGPITCGIGQLNKVASSVLGWEKVNNTTHAIIGRYAESDIKARRRRKQTLAKNTISVAQAITSSLYELAGVNSLSFRENFTDKTLTIDGISLLPHSIYVCVEGGDSHEIANVLLRTKTIGAAFNGDIEINLLEPASGQEYPIKFSRPKEVTIFCKVTVKKSSFDAQTIIPDALEKWSHGEIEGDNGLVVGRDVSPFEISAAVNAVEPHLFVTKVELSTDGKNWHVALIPIAINQIARLPKGAIQVVMV
>NZ_CP017085.1|WP_004243617.1|2840608_2840953_-|hypothetical-protein
MRTFAINQHNDLVIDAKGDLQICDNDEAVKNLCQHFIKAVRGEMLHKKDKGIPYWSATFSRQVDIPLFEMAFRQRLAEIEEVVAISHFNAFLDNGVLKYQADIRTIYGGFTLHG
>NZ_CP017085.1|WP_004243621.1|2840949_2841642_-|hypothetical-protein
MSKPNNDIASVGSLAGAFSSAFRHLMMNTDDMLPATVIDYDEKSNRAVIKPLVMMLTTDNQTISRAPVANIPVFRFGGGGFFIRAPIKAGDFGWLKANDRDISLIFQRGGLEDRPNTTRLHTFSDAMFFPDTLKGWVIDGKNIDALVIQSMDGSVCFSLHNDKVVLETPKYEINARETIFTGNVTVNGNYAVNGNSDSQGGVMRHNGKDIGSTHRHSGVQAGKDNTGSPI
>NZ_CP017085.1|WP_004243622.1|2841644_2842457_-|hypothetical-protein
MDLRRIRLGIEVGERLQWYEGLRISASGTKYANPLQNECNVTISGLNAQTRDYLLTETSPYNNNKQTRRLYLEVGRVNTGLLSLFIGDIVSAEIDSPPDVTLTLSAKTSHQSAGKIISSSGGTMRRLSEIALAIADDCGVKLDFQATDKNIANWYYCGSALHQIERLQEAGDVKAFIDDDTLFVKDDDKALKSRLRILNMNSGMIGIPKATESGLTVSYLIDSTSELGGMLRLESKLNPSLNGDYIIEQLAFSVASHEADFNYTAICKRA
>NZ_CP017085.1|WP_004243623.1|2842425_2842746_-|hypothetical-protein
MQEIPLQAIPNQRFSVAIAGVNWQLTLKVANQTMFCDIEREGEILITGMRLVANTPIIPYRYLNQGINLMFLTEHDALPWYEEFTKTQSLVYWSEEDGSSTNKARN
>NZ_CP017085.1|WP_004250719.1|2842758_2843247_-|hypothetical-protein
MITEVRIFDLASFTTLFDSVNPTQVTIDDSHQAITFTVENGESRSDHVVINPISISISLLLTGDIANAYATIKQLYDENTLVGIQTRVSTYQPMLLESLSHDEDPSKVDAIELKLKFIEWKSIEPEYNKKSAKSTKKPKQSSTINRGNVKSKKSMPIGKKQG
>NZ_CP017085.1|WP_017628009.1|2843249_2845553_-|hypothetical-protein
MSLLPVFSQVLTLDAEVSDNALNNIRKSTNEILEEMKKIEQGASAGINRFFAFVQEIATSFNELSLEPEINLSVDNQEVIQASETVENSIQKIVKTALSSTQEFDTFLQNILTGLTSLSLDEPINIEINSGETQEKILSITSSIDALKDAMSVLNYTRNLLSNDVDSDASHLANLNAEYQAMEDQLASLNNELTLLTEAEKKNKENKLVIDEVIKNLGADYDQFISTMQTQGIKAAIEEAQAQRRLSSSVDETGKSYQQTVDKMKDFILNAIGATDIMGTLQKVFSASLERSQEIESLDKLSKKMGIAAIDIDAFSGAMAAIGGTKEAAQADLAAMATAFDDTQDPIEQLLQVADNVKNMSFDDAQKELEKLGVVDDKTIELMMKGRQELERTMGVQKQFSGINDDSIESAIQLNATIHKFSQLAAQFKNNFLDMIIPTLAKGMEWFDKLVDFCVKNKDIVISFFSAIGAAVAIYYLPVMISAAASTLAMALPIIAIATVIGLLGVAFKLVYDDIMNFINGNDSMIGRILEKYPVLKSVIMTIWQAWQSFFEYLKEAVTVVADFVIAAWDLISNSFNQFIQTLEIGINNLIAWGQSIIDIFIFVSDSVVSLFEWMWGCVEKILDFVDEKINLIQDIWQSAKSFFGMDDEEKEIRVVQKVERRLTNEGELDYILPQSQTATRYYSPMQEVKSLNNGLAISSNNSLNPMTSQMISNQSSIKNESNVQIGEIKIETQATNGAEVVKEIKKSYTEQEAKNISQNHSSGWRV
>NZ_CP017085.1|WP_004243627.1|2845635_2846094_-|hypothetical-protein
MLIKPKEITVIDSDRQQHTFIISRLPATIGREILAKYPLSNAPKIGDYEVSKEAMLKMMAYVAVEKEGQEIYLKTSTLIDNHVPDGEALIRLELEMLKYNTSFFGNGGSQNFLQYLLGKLSGSLPSIIKTLMASLPSSSQPASPLSQNSKQP
>NZ_CP017085.1|WP_012368088.1|2846153_2846606_-|hypothetical-protein
MNDISATGLSLIIQASKTFPAGIPITTFSDEGDPLDLPTVNITQTAVDINGNLVSWSSPTPQTVTINVLAGSEEDENLAILFDANTARRGRRPASDVITLVASYGDGSITTARNGRITDGCRGNSVAGAGRLKSKQYTFIFQDFDRVRAR

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Crispr_ID: NZ_CP017085_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017085_3

2915609-2916004

TypeI-E

I-E:NA

Consensus_repeat	Method
CGGTTCATCCCCGTATACACGGGGAACAC	CRISPRCasFinder
GTTCATCCCCGTATACACGGGGAACAC	PILER-CR
CCCGTATACACGGGGAACAC	CRT

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP017085_3

>merge|NZ_CP017085|3|2915609-2916004|CRISPRCasFinder,PILER-CR,CRT
TAATTTATCCCCGTATACACGGGGAACACTAGAAACTGCTACCGGTGCGCGTCTGCAGTCTCGGTTCATCCCCGTATACACGGGGAACACGCGTAGTTGCGGATCATTTTGGTACCAAACCCTCGGTTCATCCCCGTATACACGGGGAACACTAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATTCCCGTATACACGGGGAACACGCGTAGTTGCGGATCATTTTGGTACCAGACCCTCGGTTCATCCCCGTATACACGGGGAACACTAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATTCCCGTATACACGGGGAACACGTGGTCCATGGGGCGCTGCGATAGGTGGCGGTCGTTCATTCCCGTATACACGGGGAACAC

>NZ_CP017085|3|2|2915609-2916004|CRISPRCasFinder
TAATTTATCCCCGTATACACGGGGAACAC	TAGAAACTGCTACCGGTGCGCGTCTGCAGTCT
CGGTTCATCCCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAAACCCT
CGGTTCATCCCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAA
CGGTTCATTCCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAGACCCT
CGGTTCATCCCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAA
CGGTTCATTCCCGTATACACGGGGAACAC	GTGGTCCATGGGGCGCTGCGATAGGTGGCGG
TCGTTCATTCCCGTATACACGGGGAACAC

>NZ_CP017085|3|2|2915612-2916004|PILER-CR
TTTATCCCCGTATACACGGGGAACACT	AGAAACTGCTACCGGTGCGCGTCTGCAGTCTCGG
TTCATCCCCGTATACACGGGGAACACG	CGTAGTTGCGGATCATTTTGGTACCAAACCCTCGG
TTCATCCCCGTATACACGGGGAACACT	AAGCCAGAATGACAAAGTGAAAGCGATACAACGG
TTCATTCCCGTATACACGGGGAACACG	CGTAGTTGCGGATCATTTTGGTACCAGACCCTCGG
TTCATCCCCGTATACACGGGGAACACT	AAGCCAGAATGACAAAGTGAAAGCGATACAACGG
TTCATTCCCGTATACACGGGGAACACG	TGGTCCATGGGGCGCTGCGATAGGTGGCGGTCG
TTCATTCCCGTATACACGGGGAACAC

>NZ_CP017085|3|1|2915618-2916004|CRT
CCCGTATACACGGGGAACAC	TAGAAACTGCTACCGGTGCGCGTCTGCAGTCTCGGTTCATC
CCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAAACCCTCGGTTCATC
CCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATT
CCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAGACCCTCGGTTCATC
CCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATT
CCCGTATACACGGGGAACAC	GTGGTCCATGGGGCGCTGCGATAGGTGGCGGTCGTTCATT
CCCGTATACACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017085.1\|WP_017627995.1\|2911739_2914139_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418
NZ_CP017085.1\|WP_017627992.1\|2916361_2917282_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP017085.1\|WP_004243716.1\|2906523_2907726_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP017085.1\|WP_012368108.1\|2927258_2927546_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP017085.1\|WP_017627990.1\|2917959_2918697_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP017085.1\|WP_017627987.1\|2920384_2921983_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP017085.1\|WP_004243712.1\|2905676_2906132_-\|DUF412-domain-containing-protein	unknown	unknown	gnl\|CDD\|179338
NZ_CP017085.1\|WP_023843594.1\|2905041_2905536_-\|YfbU-family-protein	unknown	unknown	gnl\|CDD\|180087
NZ_CP017085.1\|WP_004243721.1\|2925991_2927248_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP017085.1\|WP_017627994.1\|2914216_2915440_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|183984
NZ_CP017085.1\|WP_017627988.1\|2919810_2920398_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP017085.1\|WP_017627993.1\|2916062_2916359_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP017085.1\|WP_017627996.1\|2907803_2909948_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NZ_CP017085.1\|WP_073969838.1\|2910284_2910428_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP017085.1\|WP_004247166.1\|2910825_2910969_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP017085.1\|WP_004247166.1\|2911365_2911509_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP017085.1\|WP_017627989.1\|2918709_2919744_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP017085.1\|WP_017627986.1\|2921979_2924673_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP017085.1\|WP_017627991.1\|2917282_2917960_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_CP017085.1\|WP_012368105.1\|2904344_2905007_-\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|183215

Protein	Function_ID	Function_description	E-value
NZ_CP017085.1\|WP_017627995.1\|2911739_2914139_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP017085.1\|WP_017627992.1\|2916361_2917282_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.56752e-144
NZ_CP017085.1\|WP_004243716.1\|2906523_2907726_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP017085.1\|WP_012368108.1\|2927258_2927546_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	4.22877e-30
NZ_CP017085.1\|WP_017627990.1\|2917959_2918697_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.81256e-48
NZ_CP017085.1\|WP_017627987.1\|2920384_2921983_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	3.46932e-138
NZ_CP017085.1\|WP_004243712.1\|2905676_2906132_-\|DUF412-domain-containing-protein	gnl\|CDD\|179338	PRK01816, PRK01816, hypothetical protein; Provisional.	7.72253e-90
NZ_CP017085.1\|WP_023843594.1\|2905041_2905536_-\|YfbU-family-protein	gnl\|CDD\|180087	PRK05445, PRK05445, YfbU family protein.	1.95663e-106
NZ_CP017085.1\|WP_004243721.1\|2925991_2927248_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
NZ_CP017085.1\|WP_017627994.1\|2914216_2915440_-\|alanine-racemase	gnl\|CDD\|183984	PRK13340, PRK13340, alanine racemase; Reviewed.	0
NZ_CP017085.1\|WP_017627988.1\|2919810_2920398_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.38781e-22
NZ_CP017085.1\|WP_017627993.1\|2916062_2916359_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.37501e-60
NZ_CP017085.1\|WP_017627996.1\|2907803_2909948_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NZ_CP017085.1\|WP_073969838.1\|2910284_2910428_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.05999e-08
NZ_CP017085.1\|WP_004247166.1\|2910825_2910969_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP017085.1\|WP_004247166.1\|2911365_2911509_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP017085.1\|WP_017627989.1\|2918709_2919744_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.02527e-121
NZ_CP017085.1\|WP_017627986.1\|2921979_2924673_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.18125e-141
NZ_CP017085.1\|WP_017627991.1\|2917282_2917960_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.67839e-57
NZ_CP017085.1\|WP_012368105.1\|2904344_2905007_-\|sugar-phosphatase	gnl\|CDD\|183215	PRK11587, PRK11587, putative phosphatase; Provisional.	1.76531e-142

>NZ_CP017085.1|WP_017627994.1|2914216_2915440_-|alanine-racemase
MSLAIRYLALLPLFVITACQQPVNYNPPATQVAQAQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTVMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
>NZ_CP017085.1|WP_017627995.1|2911739_2914139_+|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRKKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIVTGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDNQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGFVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDSLVAYGLPDNL
>NZ_CP017085.1|WP_004247166.1|2911365_2911509_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP017085.1|WP_004247166.1|2910825_2910969_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP017085.1|WP_073969838.1|2910284_2910428_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIRLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP017085.1|WP_017627996.1|2907803_2909948_+|phosphate-acetyltransferase
MSRTIMLVPTDTRVGLTSVSLGVIRSMEQKGVRLSVFKPIAQPRVKGALDQTTAIIRSHSTIQSAEPLNMDYVESLLSSNKKDVLMEEIVARYHENTADAEVVLIEGLVPMRKHPFAQSLNYEIAKTLGAEIVFVTALGNNTAEQLKERIEFARAEFGGVKNQNITGVIVNKLNAPVDDQGRTRPDLSEIFDDSSKAIISNVDLNTIEKNSPLPLLGCIPWNFDLIATRATDMAKHLNATIINKGDIETRRIKSVTFCARSIPHMLEHFRPGSLLVTSADRPDVLVSACLAAMNGVEIGAILLTGGYQIDAPIKQLCERAFETGLPIFMVNSNTWQTSLNLQSFSLEVPADDHERIEKIQNYVAQHINNQWIDSLTANSERPNRLSPPAFRYQLTELARKAKKRIVLPEGDEPRTVKAASICAERGIATCVLLGDPEEIRRVAAAQGVELGTGIELVNPKEVREIYVPRLVELRKNKGMTEVVAREQLEDNVVLGTLMLEKGVVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAKAFGIDPRVAMISYSTGNSGAGSDVEKVREATRLAQEKRPDLIIDGPLQYDAAVMADVAKSKAPNSPVAGKATVFIFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQASQQENA
>NZ_CP017085.1|WP_004243716.1|2906523_2907726_+|acetate-kinase
MSSKLVLVLNCGSSSLKFAIINPENGEEFLSGLAECFNLPEARLKWKMDGQKHEAALGAGAAHSEALNFIVNTILAEKPELSQQIAAIGHRIVHGGEKFTKSVVITDEVIKGIEAAIPFAPLHNPAHLIGIEEARKAFPHLINKMVAVFDTAFHQTMPEEAYLYALPYSLYKDHSIRRYGAHGTSHFFVSREAAKMLNKPVDELNVITCHLGNGGSVSAIVNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIVFHLHDTLGMSVEDINKLLTKESGLLGLTEVTSDCRYVEDNYETKADAKRAMDVYCHRLAKYIGSYCALMEGRLDAIIFTGGIGENAAMVRELSLKKLALLGFEVDHQRNLDARFGKSGTITTDNSRLAVVIPTNEELVIAQDASRLTA
>NZ_CP017085.1|WP_004243712.1|2905676_2906132_-|DUF412-domain-containing-protein
MNEPTVTPPGFFKKLRLGNEYLKTWPVEKQLAPVFPENRMIKATRFGIRYMPPIAIFTLTWQIALGGDLGPAITTALFACSLPMQGLWWLGKRAATPLPAVLLNWFYEIREKFEQAGIALAPVEKTPTYLSLAHLLKRAFKQLDRSFLDDV
>NZ_CP017085.1|WP_023843594.1|2905041_2905536_-|YfbU-family-protein
MEMTHAQRLILSNQYKMMTMMDPDNAERYRRYQTIIERGYGLQLRELDRDFDEMSEETCRTIINIMEMYHALQVSRENLKSPEMPDARRVAFMGFDAATESRYLSYVRFMVNTEGRYTHFDSGSHGFNSQTPMWEKYQRMLAVWLACPRQYHLSSVEIQQILNA
>NZ_CP017085.1|WP_012368105.1|2904344_2905007_-|sugar-phosphatase
MTITCKGFLFDLDGTLVDSLPVVEYCWALFGERVGVSTQEINNYIHGKPAIESIRHFMPNATQAQIEETFRWLEKLEATQTEGLAPLPGAIELINRLNDLAIPWAIVTSGTVPIASTRQSVTGIPEPKHWVTAECITQGKPNPEPYLLGAKKLGLAPEECVVFEDAAAGIYSGLDAGCQVIAVHAPISLPRRNEIDLIIDSLNDLQIDKENQQVVIKHKC
>NZ_CP017085.1|WP_017627993.1|2916062_2916359_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSARIREMIWQQINEFAEDGNVVMAWGTNTESGFDFQTYGENRREPIDFDGLRLVLFKPYKEDV
>NZ_CP017085.1|WP_017627992.1|2916361_2917282_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLRPIPIKDRHSMIFIGMGRIDVKDGAFVVIDEINGERMLIPVGSLACILLEPGTRISHAAVKLAATVGTLLIWVGEAGVRLYSVGQPGGARSDKLLYQAKLALDNDLRLKVVRKMFELRFGESAPLKRSVDQLRGIEGARVRKQYQMLAKKFKIDWKGRRYDPKDWEAGDIINRCISAATACLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPVAFKVASYKAIAPDREVRIACREAFRKYQTLNKLIPLIEEVLSAGEITPPEPPIDAQPPAIPQAHPFGDEGHREK
>NZ_CP017085.1|WP_017627991.1|2917282_2917960_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRISIDYSADYLHSLLANKLPDGYTIHQLLWRLFTEEKERSFLYRLEIGKNGKPIFYILSSIAPTTKNNFFKIETKPFLPKLVKKMKLAFSLRANPTVCITDKEGKRQRHDVLMHAKKQAQLDGKDYSHDDIHHLMQQAALNWISSDDRLNKWGISLTQLPDIKAYTPERIKKPSGKIMSFSSVDYQGVLTIEEPHLFWQQYQQGFGRAKAFGCGLMLIRNI
>NZ_CP017085.1|WP_017627990.1|2917959_2918697_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAQYLVFRLYGPLASWGLPAVGGDRQTGIAPSRSAILGLLSASLGINRKDESKLLQLQQSVLVATKQLVPSMLLRDFHTAQVPSKRKNITHPTRRSELAEKDQNTILSSRDYRCDAIWIIAIKLTGHSQYTLEQLKNALLKPVYILSLGRKSCPLSLPMMPKIVEVEQLKEALDTQFPYITTSDKADSYWFHSDGWVTYFWEGNYQDIKGENIMTLYPWDDPINRQHWQFRQRKMYQMSVKRESE
>NZ_CP017085.1|WP_017627989.1|2918709_2919744_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSQFIQLHILTSYAPSNLNRDDLGRPKTAIMGGFERLRISSQSLKRHWRTSELFNIALSGNIGIRTKKFGLQLYDALIEGGVSEKNAKKWVGLIIEQYGKIKKDSIETEQLVHISHLEKSLAFDLINLLIKEQREPTKQELESLKTINTSVDIALFGRMLASAPKYNIEAACQVAHAISVHSTVIEDDYFTAVDDLNNGETDTGSAHIGEAGFAAALFYSYICINKTQLIESLDGNEELANKAIQALTEVAIKVSPTGKQNSFASRAYASYVLAEKGSYQPRSLSVAFLKPIDDEDMENAAINALKFRMENFDKVYGTCAESRYQLNAVQGEGSLSGLLQFVAE
>NZ_CP017085.1|WP_017627988.1|2919810_2920398_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MGSYKSKNITLYNYPELKINVLRWWESLFLSPNELSKKGILPAPNRYKSELKRCDSITAIMLTEGFRALWLSFPVDLINNATTEDIERWAIIVAILVYITQDSEKHFATIAGEKDESKKSCISESRFLQLQSSRTYDEFIRRLRRILIQIKGKSSVLSMCKDIEKWVLEKQRFSSIQTNKQIIIEWAMKYYQAAI
>NZ_CP017085.1|WP_017627987.1|2920384_2921983_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNIINQPWLPFRFRDGEIKTLPISAISHPDIIDFSLNRADFKGAAYQFAIGLLQTIFAPEDEDEWEEYFETPPSSKKLQSAFDKVAHAFNIMGDGPLFMQDFSTLEEQKNIPIAQLLIDAPGENGIKQNTDHFIKQGIADVMSLEMAVLALFTLQINAPSGGKGHLVSLRGGGPLTTLVYPAEENSTLWQKLWLNVINREFWEYDEPNFDDGSVFPWLIPLNLKEGKGEKVSPDDVHPLYMYWAMPRRIRLKVENKSVTCQISDMKSNFSVKYYVTKNYGLDYQEGWLHPLTPYYWDPKKPEMFPNSIKGRQGGIHYNLWDRLFLSSNENGQKSATVVSHYLKLYQLLEFTRKPRLLIFGYDMDNMKPRGWYNLEMPIFHVKDEYNNKIINEIKIIQKLTIDCLRSVKEQVKKAWFSSPKDMKGDISFIDLTFWQRSENIFFEVVQNIIVQIQKNDFLTHEQAKKWLNSIRKISISIFDEYALSALGTQKSVSGCIKARNGLIKDLYSNKRIKKFAEDFKITKENGEQYGIL
>NZ_CP017085.1|WP_017627986.1|2921979_2924673_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKDYYSYWGKFKSENNHEYYHLLPYHSLDVAAVGMILFPENSKIIKDISTFLQIHPKEFSKLFLLLLSLHDVGKFSSSFQYINPNIIDKLKVPESRFSYDGNNYRHDRLGYYFWRKIKNTIFSSIIISNADYKERKISDGFWIIFETALGHHGKPINKNNIDESIENYIHKDNDKAAIDFTLDILKLFSPKLSVENFYDKGWKERLKQISWLLAGMVTLSDWIGSNRDYFPYYKKKIPLSEYWFLALNRAKKAVLSSGFNRNYQISPFISVEYHFGYKPTPLQQWAEKVTINEHPQLFILEDTTGSGKTEAALTLAHRLMEVDAADGFYFGLPTQATSNAMFLRIINHYKKIFDEKKEVPSIVLAHSASNMNEQFTKIIRDGNERYNISDNTASAQCYQWLSDSRKKALLATIGVGTLDQALLSMLPRRHQSLRLLGLNRKIIIFDEIHSADEFMFEIIEKLLSTHLHQGGSVILLTATLSLKQRKRIIDSWFNAFDQISPEIESKSFPLATHLTCFPKVIKKEYPLKSRNQVSRKVKVEIINKEEQCIDIIISAINNGNCVVWIRNTVNDAIKSYYDIKKRLSKDNNCLLFHSRFNLKDRKIREEQVLKYFGKNSTAQQRKGTVLIATQVFQESLDADADIMISDICPIDDLIQRSGRLHRHTRTKYGDYTSETIDKRRPPILYVHAPLFIETPSSCWLTEQFSSTEAVYRSPGRLWLTLRSLTRLGEINMPKDARKLIESVYSDNAYNEIPQSLIQKENNDIGEKKARVSKAKIQLLKITKGYSEESSEFWTEDHYDISTRYSDIEMVNILLLKKIKDNYVPWIEDSHFSIALSTVKISKKKYADKLVSVPQEVIDTINKQYPQARYLQLWIPDEDQYYQYDHLIGFCERQELS
>NZ_CP017085.1|WP_004243721.1|2925991_2927248_-|PTS-ascorbate-transporter-subunit-IIC
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPATECIKGTVKTIMGFVILGAGAGLVINSLGDFSTIFQHAFGIQGVVPNNEAIVSIAQKSFGKEMALIMFFAMLINILIARLTPWKYIFLTGHHTLFMSMMVAVILATAGLEGAVLVAVGSLVVGVSMVFFPAIAHPYMKKITGSDDVALGHFSTISYVVSGFIGSKFGNKAHSTEEMNVPKSLLFLRDTPVAIAFTMGIIFIITCLFAGDTFVREVSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGFLSSFAAGVIGMFILYALDWTVIIPGVVPHFFVGATAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGIANTTFSDADFGVIGILLGIIVR
>NZ_CP017085.1|WP_012368108.1|2927258_2927546_-|PTS-sugar-transporter-subunit-IIB
MKITVVCGNGLGSSLMMEMSIKSILKDLAVNADVDHVDLGSAKGTPSDIYVGTRDIAEQLNAQAVNGKIVSLDNMIDKVAMKEKLSTALRELGAL

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Crispr_ID: NZ_CP017085_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017085_4

2924918-2925861

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGTGCATACGGGGAACAC	PILER-CR
CGGTTCATCCCCGTGCATACGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGTGCATACGGGGAACAC	CRT

15 spacers

cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

The CRISPR arrays of NZ_CP017085_4

>merge|NZ_CP017085|4|2924918-2925861|PILER-CR,CRISPRCasFinder,CRT
CGATTCATCCCCGTGCATACGGGGAACACCTCATTGTTCATTGCCTCGTCCTCAGCCCATTCGGTTCATCCCCGTGCATACGGGGAACACTGGTGTGTACATGTGTTTGGTCATCACGTTCGCGGTTCATCCCCGTGCATACGGGGAACACTCAGCCATACAGTCAGAAAGTCTTTGAAGATGCGGTTCATCCCCGTGCATACGGGGAACACGCCTCGGATATCATTGCGAACAATCATTTCACCGGTTCATCCCCGTGCATACGGGGAACACCTGCAATCAATGCAACCTGTGAATATTCGATACGGTTCATCCCCGTGCATACGGGGAACACCTGCAATCAATGCAACCTGTGAATATTCGATACGGTTCATCCCCGTGCATACGGGGAACACTGCAAATAAGATGGCAAAGCGGAACGGTTCCCCGGTTCATCCCCGTGCATACGGGGAACACATAACCAAGCCTTAAAAGGTCGTCTGCGCATTCGGTTCATCCCCGTGCATACGGGGAACACAAAGAAATCCCTGAACAAGATGCGGTTTACACCGGTTCATCCCCGTGCATACGGGGAACACAGTCGAACACCATTTAATAAAACATTGTAAAACGGTTCATCCCCGTGCATACGGGGAACACTAAACGGTTATAAACATCTAAAGTCATTAACGCGGTTCATCCCCGTGCATACGGGGAACACTTTTTCTGTTTTGCTGAGAGAAACGTAATCAACGGTTCATCCCCGTGCATACGGGGAACACAACAGAAATAACAGCTGCGATACGTTCTATTTCGGTTCATCCCCGTGCATACGGGGAACACTTCAGCAGGTAATGATTGAATTGCTAACATTGCGGTTCATCCCCGTGCATACGGGGAACACTTCTTACACTGTTGATGACGATGCTATTCGTACGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP017085|4|3|2924918-2925861|PILER-CR
CGATTCATCCCCGTGCATACGGGGAACAC	CTCATTGTTCATTGCCTCGTCCTCAGCCCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	TGGTGTGTACATGTGTTTGGTCATCACGTTCG
CGGTTCATCCCCGTGCATACGGGGAACAC	TCAGCCATACAGTCAGAAAGTCTTTGAAGATG
CGGTTCATCCCCGTGCATACGGGGAACAC	GCCTCGGATATCATTGCGAACAATCATTTCAC
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	TGCAAATAAGATGGCAAAGCGGAACGGTTCCC
CGGTTCATCCCCGTGCATACGGGGAACAC	ATAACCAAGCCTTAAAAGGTCGTCTGCGCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AGTCGAACACCATTTAATAAAACATTGTAAAA
CGGTTCATCCCCGTGCATACGGGGAACAC	TAAACGGTTATAAACATCTAAAGTCATTAACG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTTTTCTGTTTTGCTGAGAGAAACGTAATCAA
CGGTTCATCCCCGTGCATACGGGGAACAC	AACAGAAATAACAGCTGCGATACGTTCTATTT
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCAGCAGGTAATGATTGAATTGCTAACATTG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCTTACACTGTTGATGACGATGCTATTCGTA
CGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP017085|4|3|2924918-2925861|CRISPRCasFinder
CGATTCATCCCCGTGCATACGGGGAACAC	CTCATTGTTCATTGCCTCGTCCTCAGCCCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	TGGTGTGTACATGTGTTTGGTCATCACGTTCG
CGGTTCATCCCCGTGCATACGGGGAACAC	TCAGCCATACAGTCAGAAAGTCTTTGAAGATG
CGGTTCATCCCCGTGCATACGGGGAACAC	GCCTCGGATATCATTGCGAACAATCATTTCAC
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	TGCAAATAAGATGGCAAAGCGGAACGGTTCCC
CGGTTCATCCCCGTGCATACGGGGAACAC	ATAACCAAGCCTTAAAAGGTCGTCTGCGCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AGTCGAACACCATTTAATAAAACATTGTAAAA
CGGTTCATCCCCGTGCATACGGGGAACAC	TAAACGGTTATAAACATCTAAAGTCATTAACG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTTTTCTGTTTTGCTGAGAGAAACGTAATCAA
CGGTTCATCCCCGTGCATACGGGGAACAC	AACAGAAATAACAGCTGCGATACGTTCTATTT
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCAGCAGGTAATGATTGAATTGCTAACATTG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCTTACACTGTTGATGACGATGCTATTCGTA
CGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP017085|4|2|2924918-2925861|CRT
CGATTCATCCCCGTGCATACGGGGAACAC	CTCATTGTTCATTGCCTCGTCCTCAGCCCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	TGGTGTGTACATGTGTTTGGTCATCACGTTCG
CGGTTCATCCCCGTGCATACGGGGAACAC	TCAGCCATACAGTCAGAAAGTCTTTGAAGATG
CGGTTCATCCCCGTGCATACGGGGAACAC	GCCTCGGATATCATTGCGAACAATCATTTCAC
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	TGCAAATAAGATGGCAAAGCGGAACGGTTCCC
CGGTTCATCCCCGTGCATACGGGGAACAC	ATAACCAAGCCTTAAAAGGTCGTCTGCGCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AGTCGAACACCATTTAATAAAACATTGTAAAA
CGGTTCATCCCCGTGCATACGGGGAACAC	TAAACGGTTATAAACATCTAAAGTCATTAACG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTTTTCTGTTTTGCTGAGAGAAACGTAATCAA
CGGTTCATCCCCGTGCATACGGGGAACAC	AACAGAAATAACAGCTGCGATACGTTCTATTT
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCAGCAGGTAATGATTGAATTGCTAACATTG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTCTTACACTGTTGATGACGATGCTATTCGTA
CGGTTCATCCCCGTGCATACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017085.1\|WP_017627995.1\|2911739_2914139_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418
NZ_CP017085.1\|WP_017627992.1\|2916361_2917282_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP017085.1\|WP_004243730.1\|2932334_2933852_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427
NZ_CP017085.1\|WP_017627984.1\|2930027_2930642_+\|thiol:disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|172475
NZ_CP017085.1\|WP_012368108.1\|2927258_2927546_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP017085.1\|WP_017627990.1\|2917959_2918697_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP017085.1\|WP_017627987.1\|2920384_2921983_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP017085.1\|WP_017627991.1\|2917282_2917960_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_CP017085.1\|WP_017627983.1\|2930706_2931612_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP017085.1\|WP_017627994.1\|2914216_2915440_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|183984
NZ_CP017085.1\|WP_017627988.1\|2919810_2920398_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP017085.1\|WP_017627993.1\|2916062_2916359_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP017085.1\|WP_004243729.1\|2931631_2932213_-\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|235677
NZ_CP017085.1\|WP_004243731.1\|2933882_2934374_-\|colicin-V-production-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP017085.1\|WP_004243721.1\|2925991_2927248_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP017085.1\|WP_004243726.1\|2929288_2929831_-\|NUDIX-hydrolase-YfcD	unknown	unknown	gnl\|CDD\|185291
NZ_CP017085.1\|WP_017627985.1\|2927575_2928019_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP017085.1\|WP_017627986.1\|2921979_2924673_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP017085.1\|WP_004243725.1\|2928245_2929292_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP017085.1\|WP_017627989.1\|2918709_2919744_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153

Protein	Function_ID	Function_description	E-value
NZ_CP017085.1\|WP_017627995.1\|2911739_2914139_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP017085.1\|WP_017627992.1\|2916361_2917282_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.56752e-144
NZ_CP017085.1\|WP_004243730.1\|2932334_2933852_-\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP017085.1\|WP_017627984.1\|2930027_2930642_+\|thiol:disulfide-oxidoreductase	gnl\|CDD\|172475	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional.	3.08334e-95
NZ_CP017085.1\|WP_012368108.1\|2927258_2927546_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	4.22877e-30
NZ_CP017085.1\|WP_017627990.1\|2917959_2918697_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.81256e-48
NZ_CP017085.1\|WP_017627987.1\|2920384_2921983_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	3.46932e-138
NZ_CP017085.1\|WP_017627991.1\|2917282_2917960_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.67839e-57
NZ_CP017085.1\|WP_017627983.1\|2930706_2931612_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	6.15076e-158
NZ_CP017085.1\|WP_017627994.1\|2914216_2915440_-\|alanine-racemase	gnl\|CDD\|183984	PRK13340, PRK13340, alanine racemase; Reviewed.	0
NZ_CP017085.1\|WP_017627988.1\|2919810_2920398_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.38781e-22
NZ_CP017085.1\|WP_017627993.1\|2916062_2916359_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.37501e-60
NZ_CP017085.1\|WP_004243729.1\|2931631_2932213_-\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|235677	PRK06029, PRK06029, UbiX family flavin prenyltransferase.	4.72059e-121
NZ_CP017085.1\|WP_004243731.1\|2933882_2934374_-\|colicin-V-production-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	1.66712e-99
NZ_CP017085.1\|WP_004243721.1\|2925991_2927248_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
NZ_CP017085.1\|WP_004243726.1\|2929288_2929831_-\|NUDIX-hydrolase-YfcD	gnl\|CDD\|185291	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional.	9.13373e-128
NZ_CP017085.1\|WP_017627985.1\|2927575_2928019_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.97304e-43
NZ_CP017085.1\|WP_017627986.1\|2921979_2924673_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.18125e-141
NZ_CP017085.1\|WP_004243725.1\|2928245_2929292_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.10508e-82
NZ_CP017085.1\|WP_017627989.1\|2918709_2919744_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.02527e-121

>NZ_CP017085.1|WP_017627986.1|2921979_2924673_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKDYYSYWGKFKSENNHEYYHLLPYHSLDVAAVGMILFPENSKIIKDISTFLQIHPKEFSKLFLLLLSLHDVGKFSSSFQYINPNIIDKLKVPESRFSYDGNNYRHDRLGYYFWRKIKNTIFSSIIISNADYKERKISDGFWIIFETALGHHGKPINKNNIDESIENYIHKDNDKAAIDFTLDILKLFSPKLSVENFYDKGWKERLKQISWLLAGMVTLSDWIGSNRDYFPYYKKKIPLSEYWFLALNRAKKAVLSSGFNRNYQISPFISVEYHFGYKPTPLQQWAEKVTINEHPQLFILEDTTGSGKTEAALTLAHRLMEVDAADGFYFGLPTQATSNAMFLRIINHYKKIFDEKKEVPSIVLAHSASNMNEQFTKIIRDGNERYNISDNTASAQCYQWLSDSRKKALLATIGVGTLDQALLSMLPRRHQSLRLLGLNRKIIIFDEIHSADEFMFEIIEKLLSTHLHQGGSVILLTATLSLKQRKRIIDSWFNAFDQISPEIESKSFPLATHLTCFPKVIKKEYPLKSRNQVSRKVKVEIINKEEQCIDIIISAINNGNCVVWIRNTVNDAIKSYYDIKKRLSKDNNCLLFHSRFNLKDRKIREEQVLKYFGKNSTAQQRKGTVLIATQVFQESLDADADIMISDICPIDDLIQRSGRLHRHTRTKYGDYTSETIDKRRPPILYVHAPLFIETPSSCWLTEQFSSTEAVYRSPGRLWLTLRSLTRLGEINMPKDARKLIESVYSDNAYNEIPQSLIQKENNDIGEKKARVSKAKIQLLKITKGYSEESSEFWTEDHYDISTRYSDIEMVNILLLKKIKDNYVPWIEDSHFSIALSTVKISKKKYADKLVSVPQEVIDTINKQYPQARYLQLWIPDEDQYYQYDHLIGFCERQELS
>NZ_CP017085.1|WP_017627987.1|2920384_2921983_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNIINQPWLPFRFRDGEIKTLPISAISHPDIIDFSLNRADFKGAAYQFAIGLLQTIFAPEDEDEWEEYFETPPSSKKLQSAFDKVAHAFNIMGDGPLFMQDFSTLEEQKNIPIAQLLIDAPGENGIKQNTDHFIKQGIADVMSLEMAVLALFTLQINAPSGGKGHLVSLRGGGPLTTLVYPAEENSTLWQKLWLNVINREFWEYDEPNFDDGSVFPWLIPLNLKEGKGEKVSPDDVHPLYMYWAMPRRIRLKVENKSVTCQISDMKSNFSVKYYVTKNYGLDYQEGWLHPLTPYYWDPKKPEMFPNSIKGRQGGIHYNLWDRLFLSSNENGQKSATVVSHYLKLYQLLEFTRKPRLLIFGYDMDNMKPRGWYNLEMPIFHVKDEYNNKIINEIKIIQKLTIDCLRSVKEQVKKAWFSSPKDMKGDISFIDLTFWQRSENIFFEVVQNIIVQIQKNDFLTHEQAKKWLNSIRKISISIFDEYALSALGTQKSVSGCIKARNGLIKDLYSNKRIKKFAEDFKITKENGEQYGIL
>NZ_CP017085.1|WP_017627988.1|2919810_2920398_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MGSYKSKNITLYNYPELKINVLRWWESLFLSPNELSKKGILPAPNRYKSELKRCDSITAIMLTEGFRALWLSFPVDLINNATTEDIERWAIIVAILVYITQDSEKHFATIAGEKDESKKSCISESRFLQLQSSRTYDEFIRRLRRILIQIKGKSSVLSMCKDIEKWVLEKQRFSSIQTNKQIIIEWAMKYYQAAI
>NZ_CP017085.1|WP_017627989.1|2918709_2919744_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSQFIQLHILTSYAPSNLNRDDLGRPKTAIMGGFERLRISSQSLKRHWRTSELFNIALSGNIGIRTKKFGLQLYDALIEGGVSEKNAKKWVGLIIEQYGKIKKDSIETEQLVHISHLEKSLAFDLINLLIKEQREPTKQELESLKTINTSVDIALFGRMLASAPKYNIEAACQVAHAISVHSTVIEDDYFTAVDDLNNGETDTGSAHIGEAGFAAALFYSYICINKTQLIESLDGNEELANKAIQALTEVAIKVSPTGKQNSFASRAYASYVLAEKGSYQPRSLSVAFLKPIDDEDMENAAINALKFRMENFDKVYGTCAESRYQLNAVQGEGSLSGLLQFVAE
>NZ_CP017085.1|WP_017627990.1|2917959_2918697_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAQYLVFRLYGPLASWGLPAVGGDRQTGIAPSRSAILGLLSASLGINRKDESKLLQLQQSVLVATKQLVPSMLLRDFHTAQVPSKRKNITHPTRRSELAEKDQNTILSSRDYRCDAIWIIAIKLTGHSQYTLEQLKNALLKPVYILSLGRKSCPLSLPMMPKIVEVEQLKEALDTQFPYITTSDKADSYWFHSDGWVTYFWEGNYQDIKGENIMTLYPWDDPINRQHWQFRQRKMYQMSVKRESE
>NZ_CP017085.1|WP_017627991.1|2917282_2917960_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRISIDYSADYLHSLLANKLPDGYTIHQLLWRLFTEEKERSFLYRLEIGKNGKPIFYILSSIAPTTKNNFFKIETKPFLPKLVKKMKLAFSLRANPTVCITDKEGKRQRHDVLMHAKKQAQLDGKDYSHDDIHHLMQQAALNWISSDDRLNKWGISLTQLPDIKAYTPERIKKPSGKIMSFSSVDYQGVLTIEEPHLFWQQYQQGFGRAKAFGCGLMLIRNI
>NZ_CP017085.1|WP_017627992.1|2916361_2917282_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLRPIPIKDRHSMIFIGMGRIDVKDGAFVVIDEINGERMLIPVGSLACILLEPGTRISHAAVKLAATVGTLLIWVGEAGVRLYSVGQPGGARSDKLLYQAKLALDNDLRLKVVRKMFELRFGESAPLKRSVDQLRGIEGARVRKQYQMLAKKFKIDWKGRRYDPKDWEAGDIINRCISAATACLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPVAFKVASYKAIAPDREVRIACREAFRKYQTLNKLIPLIEEVLSAGEITPPEPPIDAQPPAIPQAHPFGDEGHREK
>NZ_CP017085.1|WP_017627993.1|2916062_2916359_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSARIREMIWQQINEFAEDGNVVMAWGTNTESGFDFQTYGENRREPIDFDGLRLVLFKPYKEDV
>NZ_CP017085.1|WP_017627994.1|2914216_2915440_-|alanine-racemase
MSLAIRYLALLPLFVITACQQPVNYNPPATQVAQAQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTVMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
>NZ_CP017085.1|WP_017627995.1|2911739_2914139_+|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRKKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIVTGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDNQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGFVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDSLVAYGLPDNL
>NZ_CP017085.1|WP_004243721.1|2925991_2927248_-|PTS-ascorbate-transporter-subunit-IIC
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPATECIKGTVKTIMGFVILGAGAGLVINSLGDFSTIFQHAFGIQGVVPNNEAIVSIAQKSFGKEMALIMFFAMLINILIARLTPWKYIFLTGHHTLFMSMMVAVILATAGLEGAVLVAVGSLVVGVSMVFFPAIAHPYMKKITGSDDVALGHFSTISYVVSGFIGSKFGNKAHSTEEMNVPKSLLFLRDTPVAIAFTMGIIFIITCLFAGDTFVREVSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGFLSSFAAGVIGMFILYALDWTVIIPGVVPHFFVGATAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGIANTTFSDADFGVIGILLGIIVR
>NZ_CP017085.1|WP_012368108.1|2927258_2927546_-|PTS-sugar-transporter-subunit-IIB
MKITVVCGNGLGSSLMMEMSIKSILKDLAVNADVDHVDLGSAKGTPSDIYVGTRDIAEQLNAQAVNGKIVSLDNMIDKVAMKEKLSTALRELGAL
>NZ_CP017085.1|WP_017627985.1|2927575_2928019_-|PTS-sugar-transporter-subunit-IIA
MLKTLLTPDVVQVIPQVKDWREAIKIACQPLIDKGCIEPRYVDAIYKSHEQIGPYYVLGPGIAMPHARPEEGVNQLSLALTIIEKGVEFGANENDPVKLLIVLAATDNDSHINAIVKLAELFDNQDDIDTLLQAKSKAEVLAVINHY
>NZ_CP017085.1|WP_004243725.1|2928245_2929292_+|LacI-family-transcriptional-regulator
MIKTRKRRNTGRVTLQEVAKHAGVGSMTVSRALRTPELVSDKLREKVNQAVAELGYIPNASAGALASAQSHIIAVLLPSFTDKASADFMQSLQQILSRHHYQILVGCYEYQLHKATDVINMLLQSNPAALVAFGSQLSDVQFLHISNANVPVVSVASQSNEQSAISIDCGYEKAAFDLTHYLIQQGKRCVGYVGALQGQRLHHQQITGWSRALLKNYLNAEQSVTTPDPASMAYGRQALTEILLRQPELDAVICSHESIALGMMFECQRRLIKIPQDLAIACLEGSENSAQIAPSLTSIHFNYHKIGKEAGKHLIALLQHLRDEVDNAMFENTVINYAYRLELGQSTP
>NZ_CP017085.1|WP_004243726.1|2929288_2929831_-|NUDIX-hydrolase-YfcD
MEQENTAVVEWVDIVDEKNEVVAQATRQQMRAENLRHRATYIVVHDGMGKILAQRRTETKDFYPGWLDATAGGVVQQGENALESARREAEEELGIAGVPFAEHGQFYYDDESCRVWGSLFSCVSHGPFALQPEEIEEVCWLTPLEITERCDEFTPDSLKALSLWLTRNNSTRLDTKETTD
>NZ_CP017085.1|WP_017627984.1|2930027_2930642_+|thiol:disulfide-oxidoreductase
MIDLYYANTPNGQKITLFLEEVAMPYTLHHVDIGKGDQFKPEFLAISPNNKIPAIVDNAPADGGEPLSIFESGAILIYLAEKSGKLLSHDLREKMTQLQWLFWQVGGFGPILGQNHHFTRYAPEKVPYAINRYTKETERLYQVLESRLAQSPYLGGNDYSIADIATYTWARYHDTHHIDLADYPAVEKWLNTISQRPAAKKLFG
>NZ_CP017085.1|WP_017627983.1|2930706_2931612_+|TIGR01777-family-protein
MNILITGGTGLIGRALICQLALDKHNITVLSRSPQKVYSHFCNEMACWTHLDDKENLNQFDAVINLAGEPIADKRWTPEQKQTLVNSRCKLTQKLVDLIKASDSPPSVLISGSAVGFYGDQGENNVTEETPPKDEFTHQLCAKWENIALDAQTPLTRVCLLRTGIVLSTKGGALPKMSPPFKLGLGGKLGNGKQYMPWIHIDDMVNAIVFLLNNNNTQGAFNLTAPHPVQNKAFTTTLAHVLKRPAFMTIPATILKLMMGESATLVLGGQQAFPKKLLDAGFSFRYPQLEGALEDIIRHKK
>NZ_CP017085.1|WP_004243729.1|2931631_2932213_-|UbiX-family-flavin-prenyltransferase
MKKLIVGLTGASGAIYGIRLLEILKSVPTVETHLVISQAARRTISLETDYSLKDIHALADIIYDDRDIGATISSGSFRVNGMVILPCSIKSLSGIVHSYTDTLVTRAADVVLKEGRKLVLCVRETPLHLGHLRLMTQAAELGAIIMPPVPAFYFQPKTIDDIVNQTVNRVLDQFDIDLPDDLFQRWQGDKPAR
>NZ_CP017085.1|WP_004243730.1|2932334_2933852_-|amidophosphoribosyltransferase
MCGIVGIAGVNPVNQSIYDALTVLQHRGQDAAGIATIDENNGFRLRKANGLVKDVFETRHMLRLKGTIGIGHVRYPTAGSSSASEAQPFYVNSPFGITLAHNGNLTNAHLLRRQLFETARRHINTTSDSEILLNVLAYELDRFDHFPLEPDNIFTAVAAMHKKLRGAYACVALIIGHGLLAFRDPYGIRPLVLGKRTLEDGRSEYMVASESVALDTLGFEFLRDVAPGEAVYITEQGQLFTRQCAENPQLVPCLFEYVYFARPDSFIDKISVYNARLRMGQKLGAKIAKEWEDLQIDVVIPIPETSCDIALEIAHILNKPYRQGFVKNRYVGRTFIMPGQQERRKSVRRKLNANRAEFRDKNVLLIDDSIVRGTTSEQIVELAREAGAKKVYFASAAPEVRFPNVYGIDMPNANELIAHGREVDEIRKLIGADGLIFQDLSDLIAAVQEENPDINQFECSVFDGVYITKDIDQGYLDYLENLRRDDEHKIRDQHEAENLEIYNEG
>NZ_CP017085.1|WP_004243731.1|2933882_2934374_-|colicin-V-production-protein
MVWIDYAIIAIIGFSALVSLIRGFVREALSLITWGCGFFVASQFYPYLAVYFTRFEDELVRNGIAIVTLFIATLIVGAVINYVISSLVQRTGLSGTDRVLGICFGALRGVLIVSALLFVLGAFTPMADSADWQRSELIPQFNHIIRWFFDYLQNASSFVSEKM

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Crispr_ID: NZ_CP017085_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017085_5

3169782-3169924

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP017085_5

>merge|NZ_CP017085|5|3169782-3169924|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP017085|5|4|3169782-3169924|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017085.1\|WP_012368229.1\|3192203_3193403_+\|transporter	unknown	unknown	gnl\|CDD\|182559
NZ_CP017085.1\|WP_004244067.1\|3164448_3167046_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP017085.1\|WP_004250359.1\|3191103_3192207_+\|Flp-pilus-assembly-complex-ATPase-component	unknown	unknown	gnl\|CDD\|236694
NZ_CP017085.1\|WP_017627938.1\|3160452_3160674_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_004244089.1\|3194297_3195050_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP017085.1\|WP_004244066.1\|3163906_3164278_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP017085.1\|WP_004248538.1\|3161337_3162072_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP017085.1\|WP_004244080.1\|3185880_3188547_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP017085.1\|WP_012368227.1\|3188710_3189481_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP017085.1\|WP_004244084.1\|3190560_3191004_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP017085.1\|WP_004244059.1\|3159350_3160250_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP017085.1\|WP_004244063.1\|3162162_3162786_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP017085.1\|WP_004244087.1\|3193680_3194295_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP017085.1\|WP_004244058.1\|3158533_3159190_-\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP017085.1\|WP_017627935.1\|3189807_3190350_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP017085.1\|WP_004244072.1\|3167866_3168070_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_017627936.1\|3184002_3185868_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP017085.1\|WP_004244061.1\|3160741_3161170_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017085.1\|WP_004244077.1\|3182373_3183801_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP017085.1\|WP_004248539.1\|3162954_3163815_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386

Protein	Function_ID	Function_description	E-value
NZ_CP017085.1\|WP_012368229.1\|3192203_3193403_+\|transporter	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	9.16478e-109
NZ_CP017085.1\|WP_004244067.1\|3164448_3167046_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP017085.1\|WP_004250359.1\|3191103_3192207_+\|Flp-pilus-assembly-complex-ATPase-component	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	5.50551e-180
NZ_CP017085.1\|WP_004244089.1\|3194297_3195050_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	9.25043e-119
NZ_CP017085.1\|WP_004244066.1\|3163906_3164278_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP017085.1\|WP_004248538.1\|3161337_3162072_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP017085.1\|WP_004244080.1\|3185880_3188547_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP017085.1\|WP_012368227.1\|3188710_3189481_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	1.72207e-168
NZ_CP017085.1\|WP_004244084.1\|3190560_3191004_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.15077e-55
NZ_CP017085.1\|WP_004244059.1\|3159350_3160250_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP017085.1\|WP_017627936.1\|3184002_3185868_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP017085.1\|WP_017627935.1\|3189807_3190350_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.2681e-131
NZ_CP017085.1\|WP_004244058.1\|3158533_3159190_-\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	5.44811e-141
NZ_CP017085.1\|WP_004244063.1\|3162162_3162786_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	1.63858e-119
NZ_CP017085.1\|WP_004244087.1\|3193680_3194295_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.55125e-90
NZ_CP017085.1\|WP_004244077.1\|3182373_3183801_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP017085.1\|WP_004248539.1\|3162954_3163815_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	6.51737e-120

>NZ_CP017085.1|WP_004244072.1|3167866_3168070_+|hypothetical-protein
MIHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNETNMTENFTALHLIKKTNNRRIIL
>NZ_CP017085.1|WP_004244067.1|3164448_3167046_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP017085.1|WP_004244066.1|3163906_3164278_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP017085.1|WP_004248539.1|3162954_3163815_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP017085.1|WP_004244063.1|3162162_3162786_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP017085.1|WP_004248538.1|3161337_3162072_-|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP017085.1|WP_004244061.1|3160741_3161170_+|hypothetical-protein
MADIATLIAKWRNGLEVEIYTENYEFRYGRIKSSRFNASGEESVYYATYFHTRAKPKDNDPFLIITFDPVVGQDDFMFIETIIDHRTYFGSPGAGKTKSHIERRSSDLKRRIENGKKISSEPSSSVQNVNKNNNDSPDQENK
>NZ_CP017085.1|WP_017627938.1|3160452_3160674_+|hypothetical-protein
MSTFIRRSRNVALAIDAGRKSGSANIEGNTPADIQASLLKSLGEFTASIPTTKQQPYVKGSHGANHKKNYFGR
>NZ_CP017085.1|WP_004244059.1|3159350_3160250_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP017085.1|WP_004244058.1|3158533_3159190_-|ribose-5-phosphate-isomerase-RpiA
MTQDELKKAVGWAALEYVKPGTIVGVGTGSTASHFIDALATMKGQIEGAVSSSEASTAKLKSYGIPVFDCNEVDSLDIYVDGADEINHQMQMIKGGGAALTREKIIAAVAKTFVCIVDESKQVDVLGKFPLPVEVIPMARSYVARELVKLGGLPEYRENVVTDNGNVILDVYNLTILNPIELENKINSIAGVVTVGLFANRGADIVLMGTSEGVKTIK
>NZ_CP017085.1|WP_004244077.1|3182373_3183801_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP017085.1|WP_017627936.1|3184002_3185868_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPATSTSAAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP017085.1|WP_004244080.1|3185880_3188547_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP017085.1|WP_012368227.1|3188710_3189481_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP017085.1|WP_017627935.1|3189807_3190350_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTPLQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP017085.1|WP_004244084.1|3190560_3191004_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPHWQINCTSTNTALQTLCHKVFKSH
>NZ_CP017085.1|WP_004250359.1|3191103_3192207_+|Flp-pilus-assembly-complex-ATPase-component
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLANEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLHGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQKNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP017085.1|WP_012368229.1|3192203_3193403_+|transporter
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVIIFQNSDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPMLTLTLIRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGVLLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQLISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP017085.1|WP_004244087.1|3193680_3194295_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKQLHQHYLELAQKSNTGQ
>NZ_CP017085.1|WP_004244089.1|3194297_3195050_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHNGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP017085_3	3.3\|2915761\|32\|NZ_CP017085\|CRISPRCasFinder	2915761-2915792	32	MK047640	Phage NV18, complete genome	10207-10238	0	1.0
NZ_CP017085_3	3.5\|2915884\|32\|NZ_CP017085\|CRISPRCasFinder	2915884-2915915	32	MK047640	Phage NV18, complete genome	10207-10238	0	1.0
NZ_CP017085_4	4.4\|2925130\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925130-2925161	32	MK047640	Phage NV18, complete genome	3002-3033	0	1.0
NZ_CP017085_4	4.14\|2925740\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925740-2925771	32	MN840487	Proteus phage 2207-N35, complete genome	31901-31932	0	1.0
NZ_CP017085_4	4.14\|2925740\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925740-2925771	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	15129-15160	0	1.0
NZ_CP017085_4	4.14\|2925740\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925740-2925771	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	13756-13787	0	1.0
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	16019-16050	0	1.0
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	14646-14677	0	1.0
NZ_CP017085_3	3.9\|2915762\|34\|NZ_CP017085\|PILER-CR	2915762-2915795	34	MK047640	Phage NV18, complete genome	10205-10238	1	0.971
NZ_CP017085_3	3.11\|2915885\|34\|NZ_CP017085\|PILER-CR	2915885-2915918	34	MK047640	Phage NV18, complete genome	10205-10238	1	0.971
NZ_CP017085_4	4.5\|2925191\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925191-2925222	32	MK047640	Phage NV18, complete genome	5814-5845	1	0.969
NZ_CP017085_4	4.6\|2925252\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925252-2925283	32	MK047640	Phage NV18, complete genome	5814-5845	1	0.969
NZ_CP017085_4	4.11\|2925557\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925557-2925588	32	MN840487	Proteus phage 2207-N35, complete genome	30688-30719	1	0.969
NZ_CP017085_4	4.11\|2925557\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925557-2925588	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	16342-16373	1	0.969
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	MK047640	Phage NV18, complete genome	38520-38551	1	0.969
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	MN840487	Proteus phage 2207-N35, complete genome	31011-31042	1	0.969
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP017085_1	1.1\|319045\|33\|NZ_CP017085\|PILER-CR	319045-319077	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP017085_1	1.2\|319101\|41\|NZ_CP017085\|PILER-CR	319101-319141	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951
NZ_CP017085_3	3.1\|2915638\|32\|NZ_CP017085\|CRISPRCasFinder	2915638-2915669	32	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	38267-38298	2	0.938
NZ_CP017085_4	4.3\|2925069\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925069-2925100	32	MW057862	Providencia phage PSTCR7lys, complete genome	14912-14943	2	0.938
NZ_CP017085_4	4.10\|2925496\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925496-2925527	32	MN840487	Proteus phage 2207-N35, complete genome	29623-29654	2	0.938
NZ_CP017085_4	4.10\|2925496\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925496-2925527	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	17491-17522	2	0.938
NZ_CP017085_4	4.10\|2925496\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925496-2925527	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	16116-16147	2	0.938
NZ_CP017085_4	4.11\|2925557\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925557-2925588	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	14969-15000	2	0.938
NZ_CP017085_3	3.7\|2915639\|34\|NZ_CP017085\|PILER-CR	2915639-2915672	34	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	38265-38298	3	0.912
NZ_CP017085_3	3.6\|2915945\|31\|NZ_CP017085\|CRISPRCasFinder	2915945-2915975	31	NC_047890	Escherichia phage PGT2, complete genome	28402-28432	4	0.871
NZ_CP017085_3	3.15\|2915761\|41\|NZ_CP017085\|CRT	2915761-2915801	41	MK047640	Phage NV18, complete genome	10198-10238	4	0.902
NZ_CP017085_3	3.17\|2915884\|41\|NZ_CP017085\|CRT	2915884-2915924	41	MK047640	Phage NV18, complete genome	10198-10238	4	0.902
NZ_CP017085_4	4.11\|2925557\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925557-2925588	32	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	63621-63652	5	0.844
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	MK552327	Pseudomonas phage Psa21, complete genome	79439-79470	5	0.844
NZ_CP017085_4	4.11\|2925557\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925557-2925588	32	NZ_CP038617	Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence	108841-108872	6	0.812
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	MN480763	Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence	43483-43514	6	0.812
NZ_CP017085_4	4.3\|2925069\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925069-2925100	32	MN018232	Synechococcus phage S-B43, complete genome	100212-100243	7	0.781
NZ_CP017085_4	4.3\|2925069\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925069-2925100	32	MK016663	Synechococcus phage S-H68, complete genome	34447-34478	7	0.781
NZ_CP017085_3	3.13\|2915638\|41\|NZ_CP017085\|CRT	2915638-2915678	41	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	38258-38298	8	0.805
NZ_CP017085_4	4.10\|2925496\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925496-2925527	32	MH616823	Phage sp. isolate ctbf364, complete genome	482-513	8	0.75
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	NC_010821	Pseudomonas phage 201phi2-1, complete genome	179292-179323	8	0.75
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	MF042360	Pseudomonas phage Phabio, complete genome	175697-175728	8	0.75
NZ_CP017085_3	3.1\|2915638\|32\|NZ_CP017085\|CRISPRCasFinder	2915638-2915669	32	NZ_CP007054	Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence	3726-3757	9	0.719
NZ_CP017085_3	3.1\|2915638\|32\|NZ_CP017085\|CRISPRCasFinder	2915638-2915669	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5035602-5035633	9	0.719
NZ_CP017085_3	3.1\|2915638\|32\|NZ_CP017085\|CRISPRCasFinder	2915638-2915669	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	655666-655697	9	0.719
NZ_CP017085_4	4.15\|2925801\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925801-2925832	32	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	327581-327612	9	0.719
NZ_CP017085_3	3.3\|2915761\|32\|NZ_CP017085\|CRISPRCasFinder	2915761-2915792	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7157	10	0.688
NZ_CP017085_3	3.5\|2915884\|32\|NZ_CP017085\|CRISPRCasFinder	2915884-2915915	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7157	10	0.688
NZ_CP017085_4	4.4\|2925130\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925130-2925161	32	AX059140	Sequence 1 from Patent WO0075335	67129-67160	10	0.688
NZ_CP017085_4	4.4\|2925130\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925130-2925161	32	NC_004735	Rhodothermus phage RM378, complete genome	67129-67160	10	0.688
NZ_CP017085_4	4.8\|2925374\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925374-2925405	32	LR721753	Aliivibrio wodanis 06/09/160 plasmid 2 complete sequence	145987-146018	10	0.688
NZ_CP017085_4	4.11\|2925557\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925557-2925588	32	NC_009819	Streptococcus phage P9, complete genome	38290-38321	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_KY020154	Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence	140146-140177	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP016763	Citrobacter freundii strain B38 plasmid pOZ172, complete sequence	64514-64545	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP021328	Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence	226363-226394	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP025467	Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence	73407-73438	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NC_018107	Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence	300176-300207	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP022441	Klebsiella sp. LY plasmid unnamed3, complete sequence	100165-100196	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	KU318421	Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence	128822-128853	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NC_023911	Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence	76769-76800	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP025964	Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence	3356-3387	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP038277	Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence	74106-74137	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP046614	Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence	129348-129379	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP043515	Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence	100842-100873	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP026014	Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence	209150-209181	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP026019	Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence	60850-60881	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_CP026019	Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence	118203-118234	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF344561	Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence	129894-129925	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF344566	Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence	126137-126168	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF344565	Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence	87406-87437	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF344562	Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence	134790-134821	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF344563	Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence	128738-128769	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF344564	Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence	129893-129924	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF042354	Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence	114817-114848	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF042353	Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence	114278-114309	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF042351	Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence	112901-112932	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MF042352	Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence	112901-112932	10	0.688
NZ_CP017085_4	4.12\|2925618\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925618-2925649	32	NZ_MG736312	Klebsiella pneumoniae strain KP91 plasmid pKP91, complete sequence	23551-23582	10	0.688
NZ_CP017085_3	3.7\|2915639\|34\|NZ_CP017085\|PILER-CR	2915639-2915672	34	NZ_CP007054	Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence	3726-3759	11	0.676
NZ_CP017085_3	3.9\|2915762\|34\|NZ_CP017085\|PILER-CR	2915762-2915795	34	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7159	11	0.676
NZ_CP017085_3	3.11\|2915885\|34\|NZ_CP017085\|PILER-CR	2915885-2915918	34	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7159	11	0.676
NZ_CP017085_4	4.4\|2925130\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925130-2925161	32	MN657098	Psychrobacter sp. strain ANT_P42 plasmid pA42P5, complete sequence	7907-7938	11	0.656
NZ_CP017085_4	4.13\|2925679\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925679-2925710	32	MN694201	Marine virus AFVG_250M801, complete genome	7954-7985	11	0.656
NZ_CP017085_4	4.13\|2925679\|32\|NZ_CP017085\|PILER-CR,CRISPRCasFinder,CRT	2925679-2925710	32	MN694455	Marine virus AFVG_250M805, complete genome	8019-8050	11	0.656

1. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

2. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

3. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

4. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

5. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

41. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

42. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

43. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

44. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 3.3|2915761|32|NZ_CP017085|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaa	Protospacer
********************************

79. spacer 3.5|2915884|32|NZ_CP017085|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaa	Protospacer
********************************

80. spacer 4.4|2925130|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
gcctcggatatcattgcgaacaatcatttcac	Protospacer
********************************

81. spacer 4.14|2925740|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN840487 (Proteus phage 2207-N35, complete genome) position: , mismatch: 0, identity: 1.0

ttcagcaggtaatgattgaattgctaacattg	CRISPR spacer
ttcagcaggtaatgattgaattgctaacattg	Protospacer
********************************

82. spacer 4.14|2925740|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 0, identity: 1.0

ttcagcaggtaatgattgaattgctaacattg	CRISPR spacer
ttcagcaggtaatgattgaattgctaacattg	Protospacer
********************************

83. spacer 4.14|2925740|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 0, identity: 1.0

ttcagcaggtaatgattgaattgctaacattg	CRISPR spacer
ttcagcaggtaatgattgaattgctaacattg	Protospacer
********************************

84. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 0, identity: 1.0

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
ttcttacactgttgatgacgatgctattcgta	Protospacer
********************************

85. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 0, identity: 1.0

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
ttcttacactgttgatgacgatgctattcgta	Protospacer
********************************

86. spacer 3.9|2915762|34|NZ_CP017085|PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.971

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaact	Protospacer
*********************************

87. spacer 3.11|2915885|34|NZ_CP017085|PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.971

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaact	Protospacer
*********************************

88. spacer 4.5|2925191|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

ctgcaatcaatgcaacctgtgaatattcgata	CRISPR spacer
ccgcaatcaatgcaacctgtgaatattcgata	Protospacer
*.******************************

89. spacer 4.6|2925252|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

ctgcaatcaatgcaacctgtgaatattcgata	CRISPR spacer
ccgcaatcaatgcaacctgtgaatattcgata	Protospacer
*.******************************

90. spacer 4.11|2925557|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN840487 (Proteus phage 2207-N35, complete genome) position: , mismatch: 1, identity: 0.969

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
taaacggttataaacatctaacgtcattaacg	Protospacer
********************* **********

91. spacer 4.11|2925557|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 1, identity: 0.969

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
taaacggttataaacatctaacgtcattaacg	Protospacer
********************* **********

92. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
tttttctgttttactgagagaaacgtaatcaa	Protospacer
************.*******************

93. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN840487 (Proteus phage 2207-N35, complete genome) position: , mismatch: 1, identity: 0.969

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
ttcttacaccgttgatgacgatgctattcgta	Protospacer
*********.**********************

94. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

104. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

105. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

106. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

107. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

108. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

109. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

110. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

111. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

112. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

113. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

114. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

115. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

116. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

117. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

118. spacer 1.1|319045|33|NZ_CP017085|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

119. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

120. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

121. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

122. spacer 1.2|319101|41|NZ_CP017085|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

123. spacer 3.1|2915638|32|NZ_CP017085|CRISPRCasFinder matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 2, identity: 0.938

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tagaaaccgccaccggtgcgcgtctgcagtct	Protospacer
*******.**.*********************

124. spacer 4.3|2925069|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MW057862 (Providencia phage PSTCR7lys, complete genome) position: , mismatch: 2, identity: 0.938

tcagccatacagtcagaaagtctttgaagatg	CRISPR spacer
tcagccgtacagtcagaaagtatttgaagatg	Protospacer
******.************** **********

125. spacer 4.10|2925496|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN840487 (Proteus phage 2207-N35, complete genome) position: , mismatch: 2, identity: 0.938

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
agtcgaacaccgtttaatgaaacattgtaaaa	Protospacer
***********.******.*************

126. spacer 4.10|2925496|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 2, identity: 0.938

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
agtcgaacaccgtttaatgaaacattgtaaaa	Protospacer
***********.******.*************

127. spacer 4.10|2925496|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 2, identity: 0.938

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
agtcgaacaccgtttaatgaaacattgtaaaa	Protospacer
***********.******.*************

128. spacer 4.11|2925557|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 2, identity: 0.938

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
taagcggttataaacatctaacgtcattaacg	Protospacer
***.***************** **********

129. spacer 3.7|2915639|34|NZ_CP017085|PILER-CR matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 3, identity: 0.912

tagaaactgctaccggtgcgcgtctgcagtctcg	CRISPR spacer
tagaaaccgccaccggtgcgcgtctgcagtctct	Protospacer
*******.**.**********************

130. spacer 3.6|2915945|31|NZ_CP017085|CRISPRCasFinder matches to NC_047890 (Escherichia phage PGT2, complete genome) position: , mismatch: 4, identity: 0.871

gtggtccatggggcgctgcgataggtggcgg	CRISPR spacer
ggggtccgtggggcgctgcgattggtggcgc	Protospacer
* *****.************** *******

131. spacer 3.15|2915761|41|NZ_CP017085|CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 4, identity: 0.902

taagccagaatgacaaagtgaaagcgatacaacggttcatt	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaacttttaact	Protospacer
*********************************  ** *.*

132. spacer 3.17|2915884|41|NZ_CP017085|CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 4, identity: 0.902

taagccagaatgacaaagtgaaagcgatacaacggttcatt	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaacttttaact	Protospacer
*********************************  ** *.*

133. spacer 4.11|2925557|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 5, identity: 0.844

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
tgaacggttataaatatttaaagtcattaggg	Protospacer
*.************.**.***********. *

134. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MK552327 (Pseudomonas phage Psa21, complete genome) position: , mismatch: 5, identity: 0.844

--ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
aattctt--actgttgatgacgatgctgttcgat	Protospacer
  *****  ******************.****

135. spacer 4.11|2925557|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 6, identity: 0.812

--taaacggttataaacatctaaagtcattaacg	CRISPR spacer
acaaaacag--ataaacatctaaagtcttgaacg	Protospacer
   ****.*  **************** * ****

136. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN480763 (Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence) position: , mismatch: 6, identity: 0.812

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
tgcctacactgtagatgaagatgctattacta	Protospacer
* *.******** ***** *********  **

137. spacer 4.3|2925069|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 7, identity: 0.781

-tcagccatacagtcagaaagtctttgaagatg	CRISPR spacer
atgcacca-gcagtcagtaagtttttgaagatg	Protospacer
 *  .*** .******* ****.**********

138. spacer 4.3|2925069|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MK016663 (Synechococcus phage S-H68, complete genome) position: , mismatch: 7, identity: 0.781

-tcagccatacagtcagaaagtctttgaagatg	CRISPR spacer
atgcacca-gcagtcagtaagtttttgaagatg	Protospacer
 *  .*** .******* ****.**********

139. spacer 3.13|2915638|41|NZ_CP017085|CRT matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 8, identity: 0.805

tagaaactgctaccggtgcgcgtctgcagtctcggttcatc	CRISPR spacer
tagaaaccgccaccggtgcgcgtctgcagtctcttcttttt	Protospacer
*******.**.**********************  .*. *.

140. spacer 4.10|2925496|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MH616823 (Phage sp. isolate ctbf364, complete genome) position: , mismatch: 8, identity: 0.75

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
tacaaaacaacatttaataaaacattttaaat	Protospacer
 .. .**** **************** ****

141. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_010821 (Pseudomonas phage 201phi2-1, complete genome) position: , mismatch: 8, identity: 0.75

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
ggttaaaacagttgttgacgatgctattcgtc	Protospacer
  .* * ** **** ****************

142. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MF042360 (Pseudomonas phage Phabio, complete genome) position: , mismatch: 8, identity: 0.75

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
tgtaaaaactgttgttgatgatgctattcgtc	Protospacer
* .  * ******* ***.************

143. spacer 3.1|2915638|32|NZ_CP017085|CRISPRCasFinder matches to NZ_CP007054 (Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tgtcaaatgctaccggtgcgtgtctgcaaagc	Protospacer
*.  ** *************.*******.  .

144. spacer 3.1|2915638|32|NZ_CP017085|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
agcaacctgataccggtgcgcgtctgtgggtt	Protospacer
 . ** *** ****************..* .*

145. spacer 3.1|2915638|32|NZ_CP017085|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
cggacgctgctaccggcgcgcgcctgcagagc	Protospacer
..** .**********.*****.******  .

146. spacer 4.15|2925801|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcttacactgttgatgacgatgctattcgta	CRISPR spacer
gccttacactcttgatgacaatgctgcgctca	Protospacer
 .******** ********.*****.. * .*

147. spacer 3.3|2915761|32|NZ_CP017085|CRISPRCasFinder matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 10, identity: 0.688

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttc	Protospacer
. . ** **.****************** .

148. spacer 3.5|2915884|32|NZ_CP017085|CRISPRCasFinder matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 10, identity: 0.688

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttc	Protospacer
. . ** **.****************** .

149. spacer 4.4|2925130|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 10, identity: 0.688

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
catatatatatcattgtgaacaatgatttctc	Protospacer
  . .. *********.******* ***** *

150. spacer 4.4|2925130|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 10, identity: 0.688

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
catatatatatcattgtgaacaatgatttctc	Protospacer
  . .. *********.******* ***** *

151. spacer 4.8|2925374|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to LR721753 (Aliivibrio wodanis 06/09/160 plasmid 2 complete sequence) position: , mismatch: 10, identity: 0.688

ataaccaagccttaaaaggtcgtctgcgcatt	CRISPR spacer
ataaccaagtcttaaaaggtagttcagattta	Protospacer
*********.********** **... .. *

152. spacer 4.11|2925557|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 10, identity: 0.688

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
ataacgataataaacatctaaagtcgattttt	Protospacer
  ****.* ****************. *  .

153. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY020154 (Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

154. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016763 (Citrobacter freundii strain B38 plasmid pOZ172, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

155. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021328 (Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

156. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025467 (Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

157. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_018107 (Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

158. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022441 (Klebsiella sp. LY plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

159. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to KU318421 (Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

160. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NC_023911 (Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

161. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025964 (Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

162. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038277 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

163. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046614 (Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

164. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043515 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

165. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026014 (Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

166. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026019 (Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

167. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026019 (Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

168. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344561 (Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

169. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344566 (Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

170. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344565 (Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

171. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344562 (Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

172. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344563 (Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

173. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344564 (Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

174. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042354 (Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

175. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042353 (Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

176. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042351 (Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

177. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042352 (Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

178. spacer 4.12|2925618|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG736312 (Klebsiella pneumoniae strain KP91 plasmid pKP91, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

179. spacer 3.7|2915639|34|NZ_CP017085|PILER-CR matches to NZ_CP007054 (Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

tagaaactgctaccggtgcgcgtctgcagtctcg	CRISPR spacer
tgtcaaatgctaccggtgcgtgtctgcaaagcac	Protospacer
*.  ** *************.*******.  .

180. spacer 3.9|2915762|34|NZ_CP017085|PILER-CR matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 11, identity: 0.676

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttcag	Protospacer
. . ** **.****************** .   *

181. spacer 3.11|2915885|34|NZ_CP017085|PILER-CR matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 11, identity: 0.676

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttcag	Protospacer
. . ** **.****************** .   *

182. spacer 4.4|2925130|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN657098 (Psychrobacter sp. strain ANT_P42 plasmid pA42P5, complete sequence) position: , mismatch: 11, identity: 0.656

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
aagatggataaaattgcgaacaatcattaatt	Protospacer
.   .*****  ****************   .

183. spacer 4.13|2925679|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN694201 (Marine virus AFVG_250M801, complete genome) position: , mismatch: 11, identity: 0.656

aacagaaataacagctgcgatacgttctattt	CRISPR spacer
gttctcgttaacagctgcgatatgttcaattg	Protospacer
. .   . **************.**** ***

184. spacer 4.13|2925679|32|NZ_CP017085|PILER-CR,CRISPRCasFinder,CRT matches to MN694455 (Marine virus AFVG_250M805, complete genome) position: , mismatch: 11, identity: 0.656

aacagaaataacagctgcgatacgttctattt	CRISPR spacer
gttctggttaacagctgcgatatgttcaattg	Protospacer
. .  .. **************.**** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

141738 : 230362

Escherichia_phage(24.0%)

integrase,transposase

attL 187548:187561|attR 234160:234173

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063693206.1\|141738_142947_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	3.4e-186	80.3
WP_053828396.1\|142969_143386_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	1.1e-43	60.6
WP_004249011.1\|144206_144725_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_017628614.1\|144797_146969_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_142836749.1\|148331_151283_+	hypothetical protein	NA	NA	NA	NA
WP_017628612.1\|151282_152221_+	hypothetical protein	NA	NA	NA	NA
WP_004249835.1\|152213_152483_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_017628611.1\|152674_153598_+	hypothetical protein	NA	NA	NA	NA
WP_012368584.1\|153687_154365_-	hypothetical protein	NA	NA	NA	NA
WP_004249837.1\|154457_156065_-	hypothetical protein	NA	NA	NA	NA
WP_017628610.1\|156078_158574_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004246670.1\|158596_159280_-	hypothetical protein	NA	NA	NA	NA
WP_004246669.1\|159369_159993_-	fimbrillin MatB	NA	NA	NA	NA
WP_004246668.1\|160132_160453_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_017628609.1\|161500_162535_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	7.4e-65	41.3
WP_001274561.1\|163077_163923_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_060589331.1\|164007_164295_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000761716.1\|164224_164713_-	hypothetical protein	NA	NA	NA	NA
WP_001094437.1\|164709_165087_-	toxin	NA	NA	NA	NA
WP_001390338.1\|165133_165511_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000692345.1\|165673_165895_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001535682.1\|165957_166434_-	RadC family protein	NA	NA	NA	NA
WP_023145813.1\|166449_166992_-	antirestriction protein	A9J566	Pseudomonas_phage	2.9e-12	29.6
WP_001535681.1\|167264_168083_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	3.6e-46	39.7
WP_001323397.1\|168237_168396_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_000820574.1\|168466_171313_-	autotransporter adhesin Ag43	NA	NA	NA	NA
WP_001069760.1\|171685_172558_-	GTPase family protein	NA	NA	NA	NA
WP_000241617.1\|172656_173529_-	hypothetical protein	NA	NA	NA	NA
WP_096043064.1\|174943_176156_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.2e-168	99.0
WP_001387788.1\|177429_178032_-	hypothetical protein	NA	NA	NA	NA
WP_072153745.1\|178126_178405_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_000148641.1\|179995_180565_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_000271020.1\|180730_181114_+	hypothetical protein	NA	NA	NA	NA
WP_032181455.1\|181110_181536_+	hypothetical protein	NA	NA	NA	NA
WP_000080195.1\|182015_183629_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000624711.1\|183659_184010_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.0e-39	65.5
WP_096043063.1\|184373_185390_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	7.0e-185	99.1
WP_000412211.1\|186509_187169_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|187369_187747_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
187548:187561	attL	NA	NA	NA	NA
WP_001067855.1\|190534_191239_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000027057.1\|191823_192684_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001387387.1\|192833_193235_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001067855.1\|193280_193985_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|194174_194990_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|195140_195845_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|196600_197452_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|197759_198575_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_096043062.1\|198635_199439_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	1.6e-14	28.7
WP_000480968.1\|199438_200275_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_028697649.1\|200381_200858_+	TnpR	NA	NA	NA	NA
WP_001339197.1\|200919_202128_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_096043061.1\|202231_203200_-\|transposase	IS4 family transposase	A4KWT9	Enterobacteria_phage	4.6e-186	99.7
WP_000557454.1\|203342_204203_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
WP_000587837.1\|204215_204758_+	AAA family ATPase	NA	NA	NA	NA
WP_000951934.1\|205239_205431_-	hypothetical protein	NA	NA	NA	NA
WP_001330846.1\|205436_205682_+	hypothetical protein	NA	NA	NA	NA
WP_000080860.1\|205732_206869_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_000935452.1\|209377_210682_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001067855.1\|210728_211433_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000454193.1\|211863_212214_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|212416_213430_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001389366.1\|213587_214061_+	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IBQ4	Erwinia_phage	7.6e-17	33.1
WP_000503573.1\|214191_214980_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
WP_000679427.1\|215185_215533_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|215526_216366_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376623.1\|216493_216994_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001381192.1\|216962_217955_-	AAA family ATPase	NA	NA	NA	NA
WP_000935451.1\|217957_219673_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000204520.1\|219711_220419_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000993386.1\|220415_220652_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277456.1\|220648_221011_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000105636.1\|221028_222723_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001340589.1\|222774_223197_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732292.1\|223232_223508_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294663.1\|223521_223872_-	mercuric transport protein MerT	NA	NA	NA	NA
WP_000429836.1\|223943_224378_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_086937185.1\|226346_227150_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	1.9e-31	38.4
WP_119563495.1\|227379_228333_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_001218908.1\|229177_230362_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.4e-162	69.9
234160:234173	attR	NA	NA	NA	NA

DBSCAN-SWA_2

261409 : 318232

Helicobacter_phage(15.38%)

integrase,tRNA,transposase

attL 284725:284739|attR 322558:322572

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246627.1\|261409_262438_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_036895833.1\|263707_264124_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	7.6e-45	62.0
WP_012368600.1\|264211_264886_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_004249861.1\|265003_265627_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	6.4e-64	58.5
WP_004249862.1\|265994_267953_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_004246621.1\|268117_268429_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_004246620.1\|268425_270081_+	cation acetate symporter	NA	NA	NA	NA
WP_017628600.1\|270403_272035_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_063693479.1\|272074_273283_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	6.2e-188	80.8
WP_017628598.1\|273354_273723_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	4.2e-39	62.8
WP_012368603.1\|273809_274502_-	lactate utilization protein C	NA	NA	NA	NA
WP_017628597.1\|274505_275924_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_017628596.1\|275914_276652_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004249867.1\|282551_283238_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_012368605.1\|283318_284716_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
284725:284739	attL	NA	NA	NA	NA
WP_004246607.1\|284797_285724_-	ribokinase	NA	NA	NA	NA
WP_017628746.1\|286004_287504_+	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	3.0e-22	38.0
WP_004246605.1\|287511_288969_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_004246604.1\|288969_289962_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_004246603.1\|290122_290584_+	transcriptional regulator AsnC	NA	NA	NA	NA
WP_004249871.1\|290683_291124_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_017628745.1\|291503_293402_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_004246599.1\|293398_294025_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004246598.1\|294640_295018_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004246597.1\|295049_295874_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246596.1\|295919_296159_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246595.1\|296220_296691_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246594.1\|296703_297237_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_004246592.1\|297251_298793_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246591.1\|298850_299714_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246589.1\|299748_301131_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246588.1\|301152_301569_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_004246587.1\|301719_303093_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_004246586.1\|303250_305077_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	1.2e-131	44.6
WP_001029679.1\|305236_306058_+\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_000267723.1\|306044_308153_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001276994.1\|308149_309817_+	AAA family ATPase	NA	NA	NA	NA
WP_001243518.1\|309819_311346_+\|transposase	transposase	NA	NA	NA	NA
WP_000251879.1\|311346_312963_+\|transposase	transposase	NA	NA	NA	NA
WP_001271300.1\|313193_313571_-	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|313980_314352_-	hypothetical protein	NA	NA	NA	NA
WP_001206315.1\|314984_315773_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000704156.1\|315830_316355_-	streptothricin N-acetyltransferase Sat2	E4ZFP7	Streptococcus_phage	4.2e-16	38.9
WP_000777554.1\|316449_316923_-	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_096058085.1\|317254_317791_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	5.3e-14	34.4
WP_000497519.1\|317905_318232_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
322558:322572	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1285130 : 1334932

Organic_Lake_phycodnavirus(50.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244908.1\|1285130_1286606_-\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_017628313.1\|1287095_1289159_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_063073854.1\|1289389_1291354_-\|protease	metalloprotease	NA	NA	NA	NA
WP_026090468.1\|1291660_1293625_-\|protease	metalloprotease	NA	NA	NA	NA
WP_004244894.1\|1294089_1294974_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_017628316.1\|1294967_1296224_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_017628317.1\|1296592_1297978_-	glycoporin	NA	NA	NA	NA
WP_004244891.1\|1298034_1298679_-	beta-phosphoglucomutase	NA	NA	NA	NA
WP_017628318.1\|1298671_1301389_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_004247346.1\|1301414_1302836_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_004244888.1\|1302954_1303923_-	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
WP_004247357.1\|1305180_1306038_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004244871.1\|1306011_1306803_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004244870.1\|1307444_1307750_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_063073853.1\|1307832_1314756_+	hypothetical protein	NA	NA	NA	NA
WP_001985440.1\|1314860_1316114_+	TolC family protein	NA	NA	NA	NA
WP_017628323.1\|1316138_1318301_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	6.2e-29	31.5
WP_036894348.1\|1318320_1319580_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_017628325.1\|1319847_1320525_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_026090469.1\|1320654_1321983_-	putrescine-ornithine antiporter	NA	NA	NA	NA
WP_017628327.1\|1322046_1324209_-	ornithine decarboxylase SpeF	NA	NA	NA	NA
WP_107034653.1\|1324582_1324690_-	DUF2618 domain-containing protein	NA	NA	NA	NA
WP_004244852.1\|1325865_1326636_-	phosphoribosyltransferase	NA	NA	NA	NA
WP_012367549.1\|1328467_1329328_-	HNH endonuclease	NA	NA	NA	NA
WP_017628331.1\|1331545_1332100_+	type IV B pilus protein	NA	NA	NA	NA
WP_004244844.1\|1332096_1332801_+	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA
WP_004244842.1\|1333113_1333692_+	hypothetical protein	NA	NA	NA	NA
WP_004244841.1\|1333695_1333965_+	hypothetical protein	NA	NA	NA	NA
WP_017628332.1\|1334191_1334464_+\|transposase	transposase	NA	NA	NA	NA
WP_004247373.1\|1334683_1334932_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.9e-07	38.5

DBSCAN-SWA_4

1439259 : 1451220

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043046.1\|1439259_1440459_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_012367584.1\|1441067_1442036_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	5.9e-133	71.0
WP_004252248.1\|1442061_1444188_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.3
WP_004246072.1\|1444216_1444621_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|1444632_1444857_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_004246069.1\|1445138_1445612_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1445809_1446019_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246058.1\|1447087_1447462_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_004246057.1\|1447477_1448443_-	lipoyl synthase	NA	NA	NA	NA
WP_004246056.1\|1448544_1449189_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_026090527.1\|1449546_1449810_-	YbeD family protein	NA	NA	NA	NA
WP_004246054.1\|1450008_1451220_-	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	8.6e-105	49.1

DBSCAN-SWA_5

1487125 : 1527095

Proteus_phage(19.51%)

integrase,lysis,tail

attL 1484766:1484781|attR 1494857:1494872

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1484766:1484781	attL	NA	NA	NA	NA
WP_049195171.1\|1487125_1488127_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	2.8e-69	44.0
WP_012367595.1\|1488083_1488329_-	excisionase	NA	NA	NA	NA
WP_004247455.1\|1488325_1488664_-	DUF2591 domain-containing protein	A0A1P8DTH6	Proteus_phage	5.6e-14	45.0
WP_017628830.1\|1488990_1489251_-	hypothetical protein	NA	NA	NA	NA
WP_017628829.1\|1489302_1489755_-	hypothetical protein	NA	NA	NA	NA
WP_153274246.1\|1490261_1490423_-	hypothetical protein	NA	NA	NA	NA
WP_036907946.1\|1490928_1491735_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	3.9e-138	94.3
WP_004246000.1\|1491727_1492546_-	exodeoxyribonuclease VIII	A0A1P8DTH1	Proteus_phage	3.5e-158	97.1
WP_004245998.1\|1492542_1492797_-	hypothetical protein	A0A1P8DTG3	Proteus_phage	7.2e-38	95.2
WP_004245997.1\|1492924_1493107_-	host cell division inhibitory peptide Kil	A0A1P8DTH8	Proteus_phage	4.4e-21	85.0
WP_004245996.1\|1493450_1493732_+	hypothetical protein	NA	NA	NA	NA
WP_004245995.1\|1493703_1493940_-	hypothetical protein	NA	NA	NA	NA
WP_049195172.1\|1493954_1494272_-	hypothetical protein	A0A1W6JNZ0	Morganella_phage	2.1e-18	51.4
WP_004245992.1\|1495019_1495541_-	hypothetical protein	I6R9C4	Salmonella_phage	5.6e-61	78.5
1494857:1494872	attR	NA	NA	NA	NA
WP_004245991.1\|1495778_1496120_-	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	2.1e-37	62.8
WP_004245990.1\|1496128_1496812_-	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	1.5e-130	98.2
WP_004245989.1\|1496894_1497104_+	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	3.3e-33	98.6
WP_049195174.1\|1497249_1497597_+	hypothetical protein	A0A1W6JNY4	Morganella_phage	3.2e-36	72.0
WP_049195176.1\|1497862_1498630_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.0e-23	52.8
WP_046335275.1\|1498629_1500015_+	AAA family ATPase	Q716D2	Shigella_phage	1.0e-114	47.7
WP_049195179.1\|1500040_1500490_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_004245984.1\|1500568_1500859_+	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_004245983.1\|1500855_1501212_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004245982.1\|1501211_1501844_+	antitermination protein	I6PDF8	Cronobacter_phage	3.3e-23	34.3
WP_004247148.1\|1502155_1502677_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004247488.1\|1502835_1503258_+	hypothetical protein	NA	NA	NA	NA
WP_026164644.1\|1503311_1503581_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.5e-19	53.5
WP_017827434.1\|1503580_1504051_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
WP_049195183.1\|1504193_1504655_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.4e-25	48.3
WP_004247494.1\|1505002_1505587_+	Bro-N domain-containing protein	Q3LZN7	Bacteriophage	2.0e-22	48.2
WP_004245979.1\|1505583_1505790_+	hypothetical protein	NA	NA	NA	NA
WP_004245977.1\|1505972_1506581_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.4e-65	69.6
WP_049195184.1\|1506583_1508071_+	hypothetical protein	A0A1W6JNY3	Morganella_phage	1.0e-264	88.8
WP_012367628.1\|1508070_1509441_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	9.0e-119	48.8
WP_012367629.1\|1509437_1510559_+	hypothetical protein	I6PD76	Cronobacter_phage	6.7e-104	51.0
WP_036907977.1\|1510670_1511432_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.5e-67	59.3
WP_004245970.1\|1511445_1512399_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	1.4e-126	71.6
WP_107033975.1\|1512401_1512686_+	hypothetical protein	NA	NA	NA	NA
WP_012367632.1\|1512725_1513205_+	hypothetical protein	G8C7P9	Escherichia_phage	3.8e-32	47.7
WP_004247502.1\|1513207_1513558_+	hypothetical protein	I6PD77	Cronobacter_phage	4.9e-21	45.1
WP_049195193.1\|1513559_1514141_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.5e-48	52.1
WP_049195195.1\|1514137_1514539_+	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_004247505.1\|1514584_1515241_+	hypothetical protein	G8C7Q3	Escherichia_phage	8.6e-59	57.7
WP_049195198.1\|1515292_1515598_+	hypothetical protein	I6PDG2	Cronobacter_phage	8.7e-22	55.4
WP_049195199.1\|1515612_1515900_+	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	6.9e-13	49.3
WP_049195202.1\|1516456_1516945_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_049195354.1\|1517216_1518053_-	antirepressor	I6S627	Salmonella_phage	1.3e-72	59.6
WP_049195353.1\|1518217_1518607_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_049195351.1\|1518759_1519161_+	hypothetical protein	NA	NA	NA	NA
WP_064971710.1\|1519273_1519546_+	hypothetical protein	NA	NA	NA	NA
WP_049195350.1\|1519613_1519847_+	hypothetical protein	NA	NA	NA	NA
WP_053089294.1\|1519972_1520794_+	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	2.3e-21	50.9
WP_049195348.1\|1520854_1523794_+\|tail	phage tail tape measure protein	A0A2P0WA05	Enterobacter_phage	1.3e-133	34.0
WP_004247512.1\|1523816_1524029_+	hypothetical protein	NA	NA	NA	NA
WP_049195346.1\|1524068_1524359_+	hypothetical protein	NA	NA	NA	NA
WP_004245944.1\|1524378_1524579_-	hypothetical protein	NA	NA	NA	NA
WP_049195345.1\|1524722_1525064_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	9.0e-28	50.0
WP_049195343.1\|1525060_1525804_+\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	2.6e-88	59.8
WP_049195341.1\|1525800_1526511_+	C40 family peptidase	F1C573	Cronobacter_phage	1.8e-86	66.4
WP_036976694.1\|1526507_1527095_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	7.2e-57	58.9

DBSCAN-SWA_6

1708928 : 1787998

Bacillus_phage(17.65%)

plate,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244558.1\|1708928_1709243_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_004244559.1\|1709273_1711568_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1711687_1711906_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_012367702.1\|1712225_1712918_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_063073899.1\|1712919_1714671_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.4e-18	31.7
WP_017628444.1\|1714673_1716443_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004244564.1\|1716581_1717541_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	9.0e-65	45.8
WP_004244566.1\|1718083_1718578_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_053828337.1\|1718705_1722569_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244569.1\|1722681_1723287_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_012367706.1\|1723297_1724647_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
WP_049195444.1\|1724780_1726070_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.4e-97	46.2
WP_004244572.1\|1726249_1726582_-	hypothetical protein	NA	NA	NA	NA
WP_012367707.1\|1726982_1728032_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_004244574.1\|1728104_1729010_-	hypothetical protein	NA	NA	NA	NA
WP_004244575.1\|1729367_1730108_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244576.1\|1730215_1732498_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244577.1\|1732552_1733407_-	formate transporter FocA	NA	NA	NA	NA
WP_017628443.1\|1734077_1735835_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_004244579.1\|1736062_1737100_+	L-asparaginase 2	NA	NA	NA	NA
WP_012367709.1\|1737174_1738443_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_017628442.1\|1738579_1740010_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	4.4e-07	25.1
WP_004244582.1\|1740146_1741235_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_017628441.1\|1741431_1742718_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_004244585.1\|1743006_1743684_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|1743865_1745539_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|1745603_1745891_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_096043116.1\|1745959_1746157_+	hypothetical protein	NA	NA	NA	NA
WP_017628440.1\|1746361_1748731_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	3.6e-22	29.3
WP_004244589.1\|1748767_1750513_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_012367713.1\|1750509_1751511_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|1752006_1752222_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|1752636_1752816_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|1752820_1753582_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_017628439.1\|1753704_1754535_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004244596.1\|1754914_1755688_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1755697_1757020_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1757000_1757732_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_012367715.1\|1757728_1762186_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_004247636.1\|1762468_1763122_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.2e-102	80.4
WP_004247637.1\|1763527_1764241_+	class B acid phosphatase	NA	NA	NA	NA
WP_049194798.1\|1764590_1766306_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|1766637_1767186_+	YcbK family protein	NA	NA	NA	NA
WP_004247640.1\|1767235_1767886_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1767978_1768452_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004244608.1\|1768542_1770279_-	type VI secretion protein	NA	NA	NA	NA
WP_017628437.1\|1770271_1771627_-	membrane protein	NA	NA	NA	NA
WP_017628436.1\|1771664_1775213_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_012367720.1\|1775215_1776679_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1776684_1777335_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1777336_1778125_-	hypothetical protein	NA	NA	NA	NA
WP_049194443.1\|1778128_1780840_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
WP_004244617.1\|1780848_1781604_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004244618.1\|1781596_1782964_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_063073901.1\|1782956_1783508_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247648.1\|1783509_1784778_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_049194444.1\|1784782_1785820_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_049194445.1\|1785783_1787559_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244624.1\|1787566_1787998_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_7

1948072 : 2026316

Enterobacteria_phage(20.63%)

capsid,tRNA,lysis,terminase,portal,integrase,tail,head,protease

attL 1969986:1970002|attR 2014076:2014092

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004247117.1\|1948072_1949176_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|1949281_1949734_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004247119.1\|1949726_1950356_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|1950494_1951748_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_004251675.1\|1951868_1952996_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	3.7e-126	60.6
WP_004251672.1\|1952976_1953219_-	excisionase	NA	NA	NA	NA
WP_004247124.1\|1953280_1953811_-	hypothetical protein	A0A1W6JP41	Morganella_phage	5.7e-53	58.6
WP_004247125.1\|1953867_1954695_-	YfdQ family protein	A0A2R2Z323	Escherichia_phage	5.5e-79	56.6
WP_004247126.1\|1954760_1955135_-	hypothetical protein	Q8HAA1	Salmonella_phage	3.2e-42	71.4
WP_004247127.1\|1955158_1955341_-	hypothetical protein	NA	NA	NA	NA
WP_004247128.1\|1955783_1956266_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	3.7e-11	51.4
WP_004247129.1\|1956369_1956609_+	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	3.0e-14	54.8
WP_004247130.1\|1956693_1957152_+	hypothetical protein	K7PJS5	Enterobacterial_phage	3.9e-26	50.8
WP_096058090.1\|1957241_1957451_+	hypothetical protein	NA	NA	NA	NA
WP_063108983.1\|1957440_1957620_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	6.8e-11	53.4
WP_004247133.1\|1957632_1958724_+	hypothetical protein	H2DE83	Erwinia_phage	8.2e-30	55.3
WP_004247134.1\|1958895_1959603_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	5.6e-56	51.7
WP_004247135.1\|1959602_1960628_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	2.8e-88	47.6
WP_004247136.1\|1960655_1961054_+	antitermination protein	Q8W638	Enterobacteria_phage	1.0e-30	55.0
WP_004247137.1\|1961396_1961609_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	7.6e-25	75.7
WP_004247148.1\|1962010_1962532_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004251632.1\|1962855_1963191_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_017827436.1\|1963294_1964221_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_036905792.1\|1964637_1965066_+	hypothetical protein	NA	NA	NA	NA
WP_036905789.1\|1965913_1966183_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	4.6e-19	53.5
WP_036900946.1\|1966182_1966653_+	lysozyme	A0A1W6JNW4	Morganella_phage	5.8e-49	60.5
WP_036905787.1\|1966795_1967257_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	3.7e-24	47.6
WP_155115349.1\|1967914_1968070_-	hypothetical protein	NA	NA	NA	NA
WP_001967215.1\|1968153_1968492_+	HNH endonuclease	F1C587	Cronobacter_phage	1.6e-40	67.9
WP_036905782.1\|1968494_1968707_+	hypothetical protein	A0A1W6JP16	Morganella_phage	1.1e-07	44.8
WP_036905779.1\|1968830_1969298_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	5.5e-44	59.7
WP_036969710.1\|1969251_1970985_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	6.9e-148	46.5
1969986:1970002	attL	NA	NA	NA	NA
WP_012367784.1\|1970984_1972253_+\|portal	phage portal protein	Q77W97	Enterobacteria_phage	5.1e-201	80.2
WP_004251596.1\|1972270_1972939_+\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	1.1e-82	65.3
WP_004251594.1\|1972942_1974109_+\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	5.6e-170	79.8
WP_004251590.1\|1974147_1974447_+	hypothetical protein	K7PKV5	Enterobacterial_phage	2.8e-33	64.3
WP_004251588.1\|1974446_1974776_+\|head	phage head closure protein	NA	NA	NA	NA
WP_004251585.1\|1974765_1975239_+	hypothetical protein	A0A0R6PHU8	Moraxella_phage	1.9e-12	31.5
WP_004251583.1\|1975244_1975586_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_004251580.1\|1975595_1976261_+	hypothetical protein	NA	NA	NA	NA
WP_004251577.1\|1976325_1976742_+	hypothetical protein	NA	NA	NA	NA
WP_036894769.1\|1976738_1977017_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_004242485.1\|1977041_1977233_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_036905771.1\|1977359_1980635_+\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	6.4e-54	45.6
WP_004251569.1\|1980635_1981232_+	hypothetical protein	S4TSP7	Salmonella_phage	4.6e-51	52.8
WP_004251564.1\|1981231_1981813_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	2.4e-52	50.0
WP_004251562.1\|1981824_1982130_+	hypothetical protein	NA	NA	NA	NA
WP_004251558.1\|1982161_1982560_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	9.2e-32	47.7
WP_017627865.1\|1986274_1986607_+	hypothetical protein	NA	NA	NA	NA
WP_017627864.1\|1986606_1987293_+	hypothetical protein	NA	NA	NA	NA
WP_036905768.1\|1987289_1987556_+	hypothetical protein	NA	NA	NA	NA
WP_004247524.1\|1987572_1987833_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.9e-17	57.4
WP_036905765.1\|1988536_1988842_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_157673314.1\|1989930_1991211_+	DUF560 domain-containing protein	NA	NA	NA	NA
WP_096058091.1\|1992727_1992892_+	isocitrate dehydrogenase	Q77Z09	Phage_21	6.3e-19	87.0
WP_063073916.1\|1993188_1994316_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	4.1e-117	59.0
WP_012367804.1\|1994296_1994539_-	excisionase	NA	NA	NA	NA
WP_063073917.1\|1994795_1995455_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.7e-46	44.4
WP_063073918.1\|1995773_1996847_+	hypothetical protein	A0A2H4JEZ8	uncultured_Caudovirales_phage	6.4e-27	36.3
WP_063073919.1\|1996859_1997258_+	antitermination protein Q	B6SCZ7	Bacteriophage	2.3e-30	54.5
WP_012367807.1\|1997479_1997740_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004247849.1\|1997894_1998152_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004247850.1\|1998157_1998430_-	transcriptional regulator	A0A2I7S995	Vibrio_phage	1.3e-16	67.2
WP_049202017.1\|1998735_1998942_+	hypothetical protein	NA	NA	NA	NA
WP_063073920.1\|1999243_2000266_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	1.2e-128	68.3
WP_063073921.1\|2000539_2001427_+	hypothetical protein	NA	NA	NA	NA
WP_063073922.1\|2001439_2001679_+	hypothetical protein	NA	NA	NA	NA
WP_063073923.1\|2001671_2002061_+	hypothetical protein	NA	NA	NA	NA
WP_063073924.1\|2002211_2002481_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	7.4e-17	46.7
WP_063073925.1\|2002480_2002951_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.0e-50	59.9
WP_063073926.1\|2003093_2003555_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	5.5e-12	34.7
WP_063073927.1\|2003794_2004370_+	hypothetical protein	NA	NA	NA	NA
WP_063073928.1\|2004436_2004715_+	hypothetical protein	NA	NA	NA	NA
WP_004247866.1\|2005185_2005698_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	1.1e-58	64.0
WP_049209882.1\|2005710_2006205_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	2.3e-48	65.6
WP_063073929.1\|2006201_2008304_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	7.7e-295	68.9
WP_004247869.1\|2008300_2008516_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.2e-17	64.3
WP_063073930.1\|2008512_2010003_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.6e-190	67.0
WP_096058092.1\|2009968_2011957_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	1.0e-248	63.9
WP_049209887.1\|2012045_2012387_+	DUF2190 family protein	A5LH31	Enterobacteria_phage	3.9e-15	47.7
WP_063073894.1\|2012398_2012671_+	ATP-binding protein	K7PH43	Enterobacteria_phage	1.1e-15	46.1
WP_063073895.1\|2012680_2013244_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	6.2e-50	57.1
WP_036973524.1\|2013243_2013639_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	2.2e-41	59.5
WP_074153257.1\|2013650_2014172_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	2.2e-65	74.7
2014076:2014092	attR	NA	NA	NA	NA
WP_049202041.1\|2014183_2014573_+\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	3.1e-16	39.4
WP_080591809.1\|2014593_2014914_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	9.7e-16	42.0
WP_063073893.1\|2014882_2017876_+\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	1.3e-109	33.8
WP_063073892.1\|2017876_2018206_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	6.7e-28	54.6
WP_004247884.1\|2018300_2018876_+	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	4.9e-18	34.1
WP_063073891.1\|2018928_2019633_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.7e-65	51.1
WP_063073890.1\|2019654_2020383_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.4e-89	61.5
WP_080978935.1\|2020352_2020937_+\|tail	tail assembly protein	K7PH50	Enterobacteria_phage	2.0e-43	47.5
WP_063073889.1\|2020951_2024155_+	host specificity protein J	A0A0P0ZBW1	Stx2-converting_phage	2.9e-277	55.5
WP_049219065.1\|2024144_2024477_+	hypothetical protein	NA	NA	NA	NA
WP_063073888.1\|2024476_2025163_+	hypothetical protein	NA	NA	NA	NA
WP_017827679.1\|2025159_2025426_+	hypothetical protein	NA	NA	NA	NA
WP_063073887.1\|2025442_2025682_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	2.0e-21	68.4
WP_063073886.1\|2025794_2026316_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	2.1e-76	83.6

DBSCAN-SWA_8

2610026 : 2643748

Escherichia_phage(22.22%)

holin,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243319.1\|2610026_2611079_-	nucleotidyltransferase	A0A067XQU1	Caulobacter_phage	1.6e-06	23.1
WP_017628042.1\|2611062_2611842_-	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	1.4e-31	39.3
WP_063073803.1\|2612219_2612714_-	hypothetical protein	NA	NA	NA	NA
WP_063073802.1\|2612713_2613058_-	M15 family peptidase	F1BUL3	Cronobacter_phage	2.9e-42	83.3
WP_004243326.1\|2613060_2613333_-\|holin	phage holin family protein	T1SA10	Salmonella_phage	1.9e-12	38.9
WP_020945795.1\|2613329_2613701_-	hypothetical protein	G9L6E6	Escherichia_phage	3.9e-16	39.1
WP_063073801.1\|2613786_2615973_-	hypothetical protein	A0A193GYU1	Enterobacter_phage	7.7e-88	58.3
WP_036976792.1\|2616146_2616398_+	hypothetical protein	NA	NA	NA	NA
WP_036976793.1\|2616426_2616741_-	hypothetical protein	NA	NA	NA	NA
WP_063073800.1\|2616737_2617040_-	hypothetical protein	NA	NA	NA	NA
WP_063073799.1\|2617050_2620434_-	hypothetical protein	A0A2I7RY58	Vibrio_phage	1.2e-183	36.0
WP_063073798.1\|2620433_2623517_-	hypothetical protein	T1SBJ1	Salmonella_phage	7.1e-164	50.6
WP_063073797.1\|2623519_2624068_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	2.0e-45	60.2
WP_063073796.1\|2624067_2624556_-	hypothetical protein	A0A0F6R7N6	Escherichia_coli_O157_typing_phage	3.0e-48	59.2
WP_063073795.1\|2624539_2627002_-	hypothetical protein	A0A0F6TJD3	Escherichia_coli_O157_typing_phage	0.0e+00	70.0
WP_063073794.1\|2627001_2627607_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.5e-65	60.2
WP_063073793.1\|2627659_2628001_-	hypothetical protein	NA	NA	NA	NA
WP_060555916.1\|2628009_2628441_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.4e-30	54.8
WP_063073792.1\|2628499_2629480_-	hypothetical protein	G9L6C5	Escherichia_phage	1.7e-111	60.3
WP_063073791.1\|2629495_2630173_-	peptidase	T1SAP9	Salmonella_phage	6.8e-43	64.3
WP_004243354.1\|2630190_2630505_-	hypothetical protein	Q2A090	Sodalis_phage	1.2e-13	45.5
WP_063073790.1\|2630501_2632166_-\|tail	phage tail protein	A0A193GYI4	Enterobacter_phage	2.4e-198	65.6
WP_004243356.1\|2632175_2632388_-	hypothetical protein	NA	NA	NA	NA
WP_063073789.1\|2632573_2634058_-	hypothetical protein	G9L6B8	Escherichia_phage	4.7e-230	77.6
WP_063073788.1\|2634057_2634627_-\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	2.6e-43	50.3
WP_147383762.1\|2634673_2635318_-	hypothetical protein	NA	NA	NA	NA
WP_063073786.1\|2635352_2635694_-	hypothetical protein	H9C172	Pectobacterium_phage	1.3e-29	58.3
WP_157742850.1\|2635686_2636115_-	hypothetical protein	NA	NA	NA	NA
WP_063073784.1\|2636133_2636409_-	hypothetical protein	NA	NA	NA	NA
WP_063073783.1\|2636456_2636852_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	6.8e-35	60.9
WP_063073782.1\|2636848_2637262_-	hypothetical protein	NA	NA	NA	NA
WP_049211513.1\|2637484_2637967_-	replication protein	NA	NA	NA	NA
WP_049211516.1\|2637935_2638871_-	hypothetical protein	A0A193GZ86	Enterobacter_phage	2.4e-70	57.6
WP_063073781.1\|2638872_2639094_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.1e-10	48.3
WP_064505757.1\|2639235_2639514_-	hypothetical protein	NA	NA	NA	NA
WP_004243373.1\|2639591_2640200_+	hypothetical protein	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	1.5e-28	35.4
WP_063073780.1\|2640596_2642321_+	DNA breaking-rejoining protein	A0A0U2I1R6	Escherichia_phage	2.1e-112	47.2
WP_063073779.1\|2642366_2643449_+	recombinase RecT	H6WRX0	Salmonella_phage	2.8e-107	55.7
WP_063073778.1\|2643493_2643748_+	AlpA family phage regulatory protein	A0A2H4J8C8	uncultured_Caudovirales_phage	4.7e-05	35.2

DBSCAN-SWA_9

2832207 : 2851010

Escherichia_phage(21.43%)

holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368081.1\|2832207_2834646_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.0e-261	54.5
WP_004243609.1\|2834657_2835275_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_004243611.1\|2835278_2836055_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243612.1\|2836170_2836713_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
WP_017628013.1\|2837281_2837461_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_017628011.1\|2838775_2839432_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	6.6e-35	39.4
WP_017628010.1\|2839428_2840616_-	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243617.1\|2840608_2840953_-	hypothetical protein	NA	NA	NA	NA
WP_004243621.1\|2840949_2841642_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
WP_004243622.1\|2841644_2842457_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2842425_2842746_-	hypothetical protein	NA	NA	NA	NA
WP_004250719.1\|2842758_2843247_-	hypothetical protein	NA	NA	NA	NA
WP_017628009.1\|2843249_2845553_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.6e-14	23.1
WP_004243627.1\|2845635_2846094_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_012368088.1\|2846153_2846606_-	hypothetical protein	NA	NA	NA	NA
WP_017628008.1\|2846616_2848104_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.4e-77	35.7
WP_004248364.1\|2848112_2848625_-	hypothetical protein	NA	NA	NA	NA
WP_017628007.1\|2848661_2849111_-\|lysis	lysis protein	NA	NA	NA	NA
WP_017628006.1\|2849107_2849512_-	hypothetical protein	A0A0E3JJ20	Enterobacteria_phage	1.0e-25	46.6
WP_004248367.1\|2849514_2849814_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_004243640.1\|2850194_2851010_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.4

DBSCAN-SWA_10

3327809 : 3398346

Salmonella_phage(17.81%)

tRNA,lysis,terminase,holin,integrase,tail,head

attL 3343623:3343669|attR 3393954:3394000

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052715531.1\|3327809_3331040_-	hypothetical protein	A0A1W6JNU2	Morganella_phage	1.8e-101	42.0
WP_036918873.1\|3331056_3331398_-	hypothetical protein	NA	NA	NA	NA
WP_072271821.1\|3331397_3331571_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
WP_036918875.1\|3331742_3332255_-	hypothetical protein	NA	NA	NA	NA
WP_096043103.1\|3333238_3335959_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	0.0e+00	66.1
WP_046334700.1\|3335955_3336300_-	hypothetical protein	A0A1W6JPD8	Morganella_phage	1.4e-44	71.1
WP_052715532.1\|3336314_3336911_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	6.4e-29	38.2
WP_036900272.1\|3336910_3337105_-	hypothetical protein	NA	NA	NA	NA
WP_046334701.1\|3337274_3337886_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	3.3e-20	46.3
WP_036907509.1\|3337882_3338092_-	hypothetical protein	A0A1W6JPF1	Morganella_phage	4.7e-11	52.2
WP_036918882.1\|3338088_3338268_-	hypothetical protein	NA	NA	NA	NA
WP_046334702.1\|3338264_3338522_-	hypothetical protein	NA	NA	NA	NA
WP_072052191.1\|3338524_3338698_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_080942627.1\|3338690_3339632_-	ash family protein	A0A1W6JPK3	Morganella_phage	3.3e-64	50.0
WP_046334703.1\|3339628_3340462_-	antA/AntB antirepressor family protein	A0A088CBR4	Shigella_phage	1.4e-21	46.1
WP_036918890.1\|3340474_3340870_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	2.1e-28	56.9
WP_036918892.1\|3340869_3341067_-	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	2.3e-07	46.3
WP_046334704.1\|3342247_3343459_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.8e-129	55.7
3343623:3343669	attL	NA	NA	NA	NA
WP_096043102.1\|3343843_3344074_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	5.3e-32	93.4
WP_096043101.1\|3344138_3346427_-	SGNH/GDSL hydrolase family protein	A0A291AXF7	Shigella_phage	1.0e-45	56.1
WP_096043100.1\|3346485_3348954_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	9.5e-252	51.6
WP_096043099.1\|3348940_3349333_-	hypothetical protein	F1C5F2	Cronobacter_phage	3.6e-44	57.9
WP_096043098.1\|3349329_3349800_-	DUF1833 domain-containing protein	F1C5F1	Cronobacter_phage	2.0e-41	51.3
WP_096043097.1\|3349799_3350276_-	hypothetical protein	F1C5F0	Cronobacter_phage	7.3e-60	71.6
WP_096043096.1\|3350279_3353672_-	tape measure protein	A0A1W6JNU2	Morganella_phage	1.9e-162	41.0
WP_096043095.1\|3353740_3354286_-	hypothetical protein	NA	NA	NA	NA
WP_096058096.1\|3354312_3354723_-	hypothetical protein	A0A286S1N7	Klebsiella_phage	1.4e-19	45.3
WP_096043093.1\|3354778_3355111_-	Arc family DNA-binding protein	H6WRU6	Salmonella_phage	8.5e-15	80.9
WP_096043092.1\|3355230_3355398_+	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	4.0e-05	46.3
WP_096043114.1\|3355471_3356227_+	DNA-binding protein	A0A2H4JDP7	uncultured_Caudovirales_phage	2.0e-35	43.7
WP_096043091.1\|3356223_3357042_+	ORF6N domain-containing protein	G9L689	Escherichia_phage	8.8e-37	62.3
WP_049199086.1\|3357158_3357566_-	hypothetical protein	NA	NA	NA	NA
WP_049199087.1\|3357556_3358339_-	hypothetical protein	NA	NA	NA	NA
WP_096043090.1\|3358589_3359279_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	1.1e-91	72.4
WP_096043089.1\|3359328_3360084_-	DNA breaking-rejoining protein	A0A1W6JNT1	Morganella_phage	2.8e-106	78.9
WP_096043088.1\|3360148_3360517_-	hypothetical protein	F1C5E4	Cronobacter_phage	1.1e-10	30.3
WP_096043087.1\|3360513_3360885_-	hypothetical protein	G0ZNE3	Cronobacter_phage	1.1e-39	65.0
WP_094960237.1\|3360886_3361228_-	hypothetical protein	NA	NA	NA	NA
WP_096043086.1\|3361227_3361626_-	hypothetical protein	I6S619	Salmonella_phage	2.3e-54	78.6
WP_004247764.1\|3361683_3361857_-	hypothetical protein	I6R9A3	Salmonella_phage	1.4e-08	51.8
WP_096043085.1\|3361866_3362961_-	hypothetical protein	G0ZND9	Cronobacter_phage	1.7e-144	68.6
WP_096043084.1\|3362973_3363423_-	hypothetical protein	I6S1Q2	Salmonella_phage	5.7e-46	67.3
WP_063073748.1\|3363422_3364697_-	hypothetical protein	G0ZND7	Cronobacter_phage	4.7e-154	63.9
WP_096043083.1\|3364700_3365630_-\|head	phage head morphogenesis protein	A0A1V0E5Q2	Salmonella_phage	1.7e-89	55.0
WP_063073746.1\|3365580_3366936_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	2.7e-163	64.4
WP_063073745.1\|3366935_3368180_-\|terminase	PBSX family phage terminase large subunit	A0A1V0E5Q3	Salmonella_phage	3.2e-187	74.2
WP_063073744.1\|3368160_3368601_-	hypothetical protein	Q716H4	Shigella_phage	1.7e-42	65.5
WP_063073743.1\|3368748_3368934_-	hypothetical protein	A0A1W6JNV6	Morganella_phage	3.4e-21	73.8
WP_096043082.1\|3368936_3369149_-	hypothetical protein	NA	NA	NA	NA
WP_063073741.1\|3369246_3369933_-	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	1.3e-97	76.8
WP_096043081.1\|3370373_3370826_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	2.8e-53	81.2
WP_036976899.1\|3370827_3371160_-	M15 family peptidase	F1BUL3	Cronobacter_phage	4.4e-35	70.3
WP_004918415.1\|3371146_3371440_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_004916901.1\|3371436_3371826_-	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_096043080.1\|3371961_3372729_-	KilA-N domain-containing protein	G9BW66	Planktothrix_phage	1.3e-18	35.0
WP_036969493.1\|3373270_3373774_-	DUF1133 family protein	A0A1P8DTF1	Proteus_phage	4.0e-80	88.0
WP_063073738.1\|3373770_3373962_-	hypothetical protein	A0A1P8DTD3	Proteus_phage	6.6e-28	95.2
WP_063073737.1\|3373951_3374317_-	RusA family crossover junction endodeoxyribonuclease	E5AGG1	Erwinia_phage	1.3e-37	64.1
WP_063073736.1\|3374313_3374604_-	DUF1364 domain-containing protein	K7P6U2	Enterobacteria_phage	1.6e-38	78.9
WP_156868289.1\|3374596_3374749_-	hypothetical protein	NA	NA	NA	NA
WP_063073735.1\|3374841_3375291_-	hypothetical protein	A0A1P8DTF9	Proteus_phage	4.5e-75	95.3
WP_063073734.1\|3375412_3375637_-	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	1.4e-24	75.4
WP_096043079.1\|3375633_3375993_-	hypothetical protein	NA	NA	NA	NA
WP_096043078.1\|3375989_3376433_-	hypothetical protein	A0A1P8DTD8	Proteus_phage	7.9e-32	90.4
WP_063073731.1\|3376781_3377075_-	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-18	56.9
WP_081213868.1\|3377088_3377424_-	hypothetical protein	A0A1C9LVV9	Vibrio_phage	3.2e-25	39.9
WP_060556819.1\|3377443_3378355_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	2.2e-97	60.9
WP_060556820.1\|3378365_3379052_-	DNA replication protein	A0A1P8DTF3	Proteus_phage	4.7e-108	87.7
WP_096043076.1\|3379048_3379987_-	replication protein 15	A0A1P8DTG2	Proteus_phage	1.8e-81	52.6
WP_096043075.1\|3379983_3380667_-	phage regulatory protein/antirepressor Ant	A0A1P8DTE1	Proteus_phage	2.0e-114	94.7
WP_063073726.1\|3380688_3381021_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	3.5e-53	99.1
WP_063693416.1\|3381223_3381451_-	Cro/Cl family transcriptional regulator	K7PHA1	Enterobacteria_phage	4.9e-22	68.0
WP_063693278.1\|3381559_3382258_+	helix-turn-helix transcriptional regulator	G8C7L8	Escherichia_phage	5.4e-43	48.6
WP_063073724.1\|3382587_3383412_+	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	9.5e-39	41.0
WP_096043074.1\|3383720_3384311_+	Fis family transcriptional regulator	C4ML07	Xanthomonas_virus	8.3e-21	37.5
WP_147383756.1\|3384326_3384815_-	hypothetical protein	NA	NA	NA	NA
WP_063073722.1\|3385007_3385196_+	hypothetical protein	A0A068C8G2	Acinetobacter_phage	3.7e-07	50.9
WP_063073721.1\|3385267_3385501_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	8.9e-11	54.5
WP_156868507.1\|3385553_3386525_+	cell envelope biogenesis protein TolA	A0A2I7QK72	Vibrio_phage	1.4e-20	47.3
WP_063073719.1\|3386743_3386998_+	hypothetical protein	NA	NA	NA	NA
WP_049199148.1\|3386994_3387216_+	hypothetical protein	NA	NA	NA	NA
WP_096043073.1\|3387212_3388139_+	recombinase RecT	F1C5B8	Cronobacter_phage	1.2e-109	66.6
WP_049206325.1\|3388178_3388799_+	hypothetical protein	A0A068CBG2	Acinetobacter_phage	1.2e-25	45.9
WP_096043072.1\|3388791_3389493_+	YqaJ viral recombinase family protein	A0A2R2Z325	Escherichia_phage	8.0e-71	58.1
WP_060558090.1\|3390069_3390357_+	hypothetical protein	A0A1B0UY37	Roseobacter_phage	5.3e-13	41.9
WP_063073715.1\|3390356_3390710_+	hypothetical protein	NA	NA	NA	NA
WP_063073714.1\|3390719_3391088_+	hypothetical protein	NA	NA	NA	NA
WP_156868475.1\|3391235_3391403_+	hypothetical protein	A0A1P8DTF6	Proteus_phage	1.5e-23	96.2
WP_096043071.1\|3391395_3391752_+	DUF2591 domain-containing protein	K7PH48	Enterobacterial_phage	2.3e-10	33.9
WP_096043070.1\|3391738_3392341_+	DNA methyltransferase	G8C7S6	Escherichia_phage	7.9e-59	57.6
WP_096043068.1\|3392776_3393934_+\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	4.4e-175	74.3
WP_017627899.1\|3394222_3395095_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	9.7e-34	36.8
3393954:3394000	attR	NA	NA	NA	NA
WP_004244244.1\|3395098_3395311_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004244246.1\|3395947_3396889_+	1-phosphofructokinase	NA	NA	NA	NA
WP_004244247.1\|3396954_3398346_-\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	2.7e-38	32.3

DBSCAN-SWA_11

3666217 : 3675061

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245601.1\|3666217_3667786_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7
WP_012368337.1\|3668186_3668867_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245603.1\|3668963_3669539_-	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004249446.1\|3669615_3670194_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245605.1\|3670261_3671287_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004245607.1\|3671321_3671777_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_017628547.1\|3671801_3672938_-	tellurium resistance protein TerA	NA	NA	NA	NA
WP_004250201.1\|3672938_3673523_-	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_017628546.1\|3673915_3675061_+	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	4.5e-31	27.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017086

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017085

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection