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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011033 Pseudoalteromonas tunicata strain D2 chromosome II, complete sequence 0 crisprs WYL,RT,cas3,DinG 0 0 0 0
NZ_CP011032 Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence 2 crisprs csa3,DEDDh,RT,DinG,cas3,cas1,cas3f,cas7f,cas5,cas6f 0 38 4 0

Results visualization

1. NZ_CP011032
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011032_1 697344-697447 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011032_2 1168159-1174007 Unclear I-F
97 spacers
cas6f,cas5,cas7f,cas3f,cas1,DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011032_2 2.15|1169027|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169027-1169058 32 MT074137 Bacteroides phage DAC16, complete genome 166727-166758 4 0.875
NZ_CP011032_2 2.64|1171967|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171967-1171998 32 NZ_AP014580 Burkholderia sp. RPE67 plasmid p2, complete sequence 178973-179004 6 0.812
NZ_CP011032_2 2.65|1172027|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172027-1172058 32 NZ_CP033036 Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence 73549-73580 6 0.812
NZ_CP011032_2 2.7|1168547|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168547-1168578 32 NZ_CP038636 Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence 307393-307424 7 0.781
NZ_CP011032_2 2.54|1171367|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171367-1171398 32 MG945371 UNVERIFIED: Microviridae sp. isolate 3065-1801, partial genome 4788-4819 7 0.781
NZ_CP011032_2 2.57|1171547|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171547-1171578 32 NC_020305 Desulfocapsa sulfexigens DSM 10523 plasmid unnamed, complete sequence 18665-18696 7 0.781
NZ_CP011032_2 2.57|1171547|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171547-1171578 32 AB711120 Bacillus phage PM1 DNA, complete genome 29601-29632 7 0.781
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 NC_008498 Lactobacillus brevis ATCC 367 plasmid 1, complete sequence 3442-3473 7 0.781
NZ_CP011032_2 2.71|1172387|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172387-1172418 32 NC_010371 Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence 177971-178002 7 0.781
NZ_CP011032_2 2.89|1173467|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173467-1173498 32 NZ_CP014093 Vibrio diabolicus strain FDAARGOS_96 plasmid unnamed, complete sequence 23452-23483 7 0.781
NZ_CP011032_2 2.89|1173467|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173467-1173498 32 NZ_CP013486 Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence 49495-49526 7 0.781
NZ_CP011032_2 2.89|1173467|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173467-1173498 32 NZ_CP046774 Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence 10286-10317 7 0.781
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 AP013404 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S41-C82 20242-20273 8 0.75
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 JN849462 Vibriophage phi-pp2, complete genome 25042-25073 8 0.75
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 NC_019509 Cronobacter phage ESP2949-1, complete genome 26434-26465 8 0.75
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 MH845412 Cronobacter phage CS01, complete genome 30845-30876 8 0.75
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 MT135026 Vibrio phage V09, complete genome 74778-74809 8 0.75
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 MT135025 Vibrio phage V07, complete genome 78848-78879 8 0.75
NZ_CP011032_2 2.6|1168487|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168487-1168518 32 NZ_CP015090 Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence 113343-113374 8 0.75
NZ_CP011032_2 2.20|1169327|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169327-1169358 32 MN694433 Marine virus AFVG_250M1159, complete genome 6296-6327 8 0.75
NZ_CP011032_2 2.26|1169687|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169687-1169718 32 MN693968 Marine virus AFVG_250M909, complete genome 24256-24287 8 0.75
NZ_CP011032_2 2.40|1170527|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1170527-1170558 32 MN693025 Marine virus AFVG_117M63, complete genome 11761-11792 8 0.75
NZ_CP011032_2 2.43|1170707|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1170707-1170738 32 AY772740 Listonella pelagia phage phiHSIC, complete genome 4436-4467 8 0.75
NZ_CP011032_2 2.43|1170707|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1170707-1170738 32 NC_006953 Listonella phage phiHSIC, complete genome 4436-4467 8 0.75
NZ_CP011032_2 2.45|1170827|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1170827-1170858 32 NZ_CP045050 Lactobacillus reuteri strain reuteri plasmid pLTR1318, complete sequence 18002-18033 8 0.75
NZ_CP011032_2 2.52|1171247|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171247-1171278 32 NZ_CP016847 Carnobacterium maltaromaticum strain TMW 2.1581 plasmid pL21581-3, complete sequence 12135-12166 8 0.75
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 NZ_CP016791 Bacillus flexus strain KLBMP 4941 plasmid unnamed1, complete sequence 73346-73377 8 0.75
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 MN270258 Streptococcus phage phi-SgaBSJ27_rum, complete genome 89804-89835 8 0.75
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 MN270259 Streptococcus phage phi-SgaBSJ31_rum, complete genome 89840-89871 8 0.75
NZ_CP011032_2 2.81|1172987|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172987-1173018 32 MN693113 Marine virus AFVG_25M241, complete genome 11312-11343 8 0.75
NZ_CP011032_2 2.83|1173107|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173107-1173138 32 NC_014824 Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence 317525-317556 8 0.75
NZ_CP011032_2 2.88|1173407|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173407-1173438 32 NZ_CP031072 Bacillus mycoides strain BPN401 plasmid pl395, complete sequence 372326-372357 8 0.75
NZ_CP011032_2 2.88|1173407|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173407-1173438 32 NZ_CP020434 Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence 47550-47581 8 0.75
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 KY612839 Vibrio phage pVco-5, complete genome 3539-3570 9 0.719
NZ_CP011032_2 2.2|1168247|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168247-1168278 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 493837-493868 9 0.719
NZ_CP011032_2 2.4|1168367|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168367-1168398 32 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 306777-306808 9 0.719
NZ_CP011032_2 2.11|1168787|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168787-1168818 32 AP014181 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S40-C70, *** SEQUENCING IN PROGRESS *** 4717-4748 9 0.719
NZ_CP011032_2 2.30|1169927|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169927-1169958 32 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 246034-246065 9 0.719
NZ_CP011032_2 2.31|1169987|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169987-1170018 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 493837-493868 9 0.719
NZ_CP011032_2 2.32|1170047|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1170047-1170078 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 493837-493868 9 0.719
NZ_CP011032_2 2.33|1170107|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1170107-1170138 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 493837-493868 9 0.719
NZ_CP011032_2 2.34|1170167|32|NZ_CP011032|CRISPRCasFinder,CRT 1170167-1170198 32 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 246034-246065 9 0.719
NZ_CP011032_2 2.35|1170227|32|NZ_CP011032|CRISPRCasFinder,CRT 1170227-1170258 32 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 246034-246065 9 0.719
NZ_CP011032_2 2.36|1170287|32|NZ_CP011032|CRISPRCasFinder,CRT 1170287-1170318 32 MH552500 CrAssphage sp. isolate ctcc615, complete genome 86098-86129 9 0.719
NZ_CP011032_2 2.49|1171067|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171067-1171098 32 NC_019490 Riemerella phage RAP44, complete genome 35036-35067 9 0.719
NZ_CP011032_2 2.52|1171247|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171247-1171278 32 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 73813-73844 9 0.719
NZ_CP011032_2 2.52|1171247|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171247-1171278 32 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 405929-405960 9 0.719
NZ_CP011032_2 2.55|1171427|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171427-1171458 32 NZ_CP013227 Staphylococcus aureus strain UTSW MRSA 55 plasmid UTSW55_1, complete sequence 16642-16673 9 0.719
NZ_CP011032_2 2.69|1172267|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172267-1172298 32 MG592566 Vibrio phage 1.197.A._10N.286.54.F2, partial genome 24390-24421 9 0.719
NZ_CP011032_2 2.82|1173047|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173047-1173078 32 MN693678 Marine virus AFVG_250M132, complete genome 878-909 9 0.719
NZ_CP011032_2 2.86|1173287|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173287-1173318 32 NZ_CP054659 Lactobacillus reuteri strain AN417 plasmid pAN417B, complete sequence 4057-4088 9 0.719
NZ_CP011032_2 2.86|1173287|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173287-1173318 32 NC_010621 Lactobacillus reuteri strain ATCC 55730 plasmid pLR585, complete sequence 5849-5880 9 0.719
NZ_CP011032_2 2.86|1173287|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173287-1173318 32 NC_015698 Lactobacillus reuteri SD2112 plasmid pLR585, complete sequence 12598-12629 9 0.719
NZ_CP011032_2 2.92|1173647|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1173647-1173678 32 MK075005 Staphylococcus phage phiSP119-2, partial genome 2781-2812 9 0.719
NZ_CP011032_2 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168187-1168218 32 MN694611 Marine virus AFVG_250M767, complete genome 13049-13080 10 0.688
NZ_CP011032_2 2.6|1168487|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1168487-1168518 32 NZ_CP012477 Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence 624605-624636 10 0.688
NZ_CP011032_2 2.26|1169687|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169687-1169718 32 NC_017363 Helicobacter pylori Lithuania75 plasmid, complete sequence 11318-11349 10 0.688
NZ_CP011032_2 2.26|1169687|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT 1169687-1169718 32 MG592656 Vibrio phage 1.286.O._10N.286.55.C4, partial genome 33049-33080 10 0.688
NZ_CP011032_2 2.51|1171187|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171187-1171218 32 NZ_CP030843 Acidisarcina polymorpha strain SBC82 plasmid pACPOL4, complete sequence 31800-31831 10 0.688
NZ_CP011032_2 2.64|1171967|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1171967-1171998 32 MH067971 Arthrobacter sp. strain ANT_H40 plasmid pA40H2, complete sequence 44019-44050 10 0.688
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 LC168164 Tenacibaculum phage pT24 DNA, complete genome 58538-58569 10 0.688
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 NZ_CP026419 Acinetobacter sp. ACNIH2 plasmid pACI-6db8, complete sequence 24198-24229 10 0.688
NZ_CP011032_2 2.79|1172867|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172867-1172898 32 NZ_CP009649 Bacillus pseudomycoides strain BTZ plasmid pBTZ_2, complete sequence 8530-8561 10 0.688
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 NZ_LR214999 Mycoplasma conjunctivae strain NCTC10147 plasmid 3 74513-74544 11 0.656
NZ_CP011032_2 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR 1172087-1172118 32 LR214965 Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11 64105-64136 11 0.656

1. spacer 2.15|1169027|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 4, identity: 0.875

aaattcaac-agtagaattcatgaaaaaaatac	CRISPR spacer
-aattgaacaagtagaatttatgaataaaatac	Protospacer
 **** *** *********.***** *******

2. spacer 2.64|1171967|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014580 (Burkholderia sp. RPE67 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

gcctaggct-cggcaccgccgaaaccaaagagg	CRISPR spacer
-cgtagcccgcggcaccgtcgaaaccaacgagg	Protospacer
 * *** *. ********.********* ****

3. spacer 2.65|1172027|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033036 (Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence) position: , mismatch: 6, identity: 0.812

gata-actggcctcaccaactcagcaggggcaa	CRISPR spacer
-atattctgacctcaccaactaagcagggggat	Protospacer
 ***  ***.*********** ******** * 

4. spacer 2.7|1168547|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gccgtccctgtcccaaagaaccgcgcttgctt	CRISPR spacer
gccgtccctggaccaaagaaccgcgcgaccgg	Protospacer
**********  **************   *  

5. spacer 2.54|1171367|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MG945371 (UNVERIFIED: Microviridae sp. isolate 3065-1801, partial genome) position: , mismatch: 7, identity: 0.781

gaaaaatcagcctgtcttttatatgtatgagc-	CRISPR spacer
taaaaatcatccagtcttttatata-atgttct	Protospacer
 ******** ** ***********. ***  * 

6. spacer 2.57|1171547|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_020305 (Desulfocapsa sulfexigens DSM 10523 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

tataaacacttgttctgccccttcttcatcct	CRISPR spacer
tgaaaacacttgtactgctccttcttcgtgtt	Protospacer
*. ********** ****.********.* .*

7. spacer 2.57|1171547|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to AB711120 (Bacillus phage PM1 DNA, complete genome) position: , mismatch: 7, identity: 0.781

tataaacacttgttctgccccttcttcatcct	CRISPR spacer
tgtttccgctttttctgcaccttcttcatcct	Protospacer
*.*   *.*** ****** *************

8. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_008498 (Lactobacillus brevis ATCC 367 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

tgaataacaatattaaaaccatcaaat-actcg	CRISPR spacer
gaattaacaatactaaaacaatcaaatcaatc-	Protospacer
 .* ********.****** ******* * ** 

9. spacer 2.71|1172387|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.781

gtaacagccattactaactctgtaatcatttc	CRISPR spacer
ccaacagccattactaattttgtaattgttgc	Protospacer
 .***************.*.******..** *

10. spacer 2.89|1173467|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014093 (Vibrio diabolicus strain FDAARGOS_96 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gttattgaagccagttctaaaggcaataatcc	CRISPR spacer
tttacccaagccagtaccaaaggcaataatgc	Protospacer
 ***.. ******** *.************ *

11. spacer 2.89|1173467|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013486 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence) position: , mismatch: 7, identity: 0.781

gttattgaagccagttctaaaggcaataatcc	CRISPR spacer
tttacccaagccagtaccaaaggcaataatgc	Protospacer
 ***.. ******** *.************ *

12. spacer 2.89|1173467|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046774 (Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gttattgaagccagttctaaaggcaataatcc	CRISPR spacer
tttacccaagccagtaccaaaggcaataatgc	Protospacer
 ***.. ******** *.************ *

13. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to AP013404 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S41-C82) position: , mismatch: 8, identity: 0.75

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
ttttggagttgattatgggtaagcctcagaga	Protospacer
*****************.*.**** . *.*  

14. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to JN849462 (Vibriophage phi-pp2, complete genome) position: , mismatch: 8, identity: 0.75

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
taatcccgatgattaagcgcaagcacaaaatc	Protospacer
*  *   * ****** * **************

15. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NC_019509 (Cronobacter phage ESP2949-1, complete genome) position: , mismatch: 8, identity: 0.75

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
gttttgaggtgattatgagcaagccaaaggta	Protospacer
 *** *** ***************  **..* 

16. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MH845412 (Cronobacter phage CS01, complete genome) position: , mismatch: 8, identity: 0.75

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
gttttgaggtgattatgagcaagccaaaggta	Protospacer
 *** *** ***************  **..* 

17. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MT135026 (Vibrio phage V09, complete genome) position: , mismatch: 8, identity: 0.75

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
taatcccgatgattaagcgcaagcacaaaatc	Protospacer
*  *   * ****** * **************

18. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MT135025 (Vibrio phage V07, complete genome) position: , mismatch: 8, identity: 0.75

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
taatcccgatgattaagcgcaagcacaaaatc	Protospacer
*  *   * ****** * **************

19. spacer 2.6|1168487|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015090 (Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence) position: , mismatch: 8, identity: 0.75

acggcaaaaccgtcgacgtcgtagccgtataa	CRISPR spacer
gcggcaaaaccttcgacgtcgaagaaggcgaa	Protospacer
.********** ********* **  *   **

20. spacer 2.20|1169327|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MN694433 (Marine virus AFVG_250M1159, complete genome) position: , mismatch: 8, identity: 0.75

agaattaaataatatatcacctcctccattag	CRISPR spacer
gcaattaaatactatatcacctccttagctat	Protospacer
. ********* *************. ..** 

21. spacer 2.26|1169687|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MN693968 (Marine virus AFVG_250M909, complete genome) position: , mismatch: 8, identity: 0.75

taaaaagagctttagctaaaaacacaaaaacc	CRISPR spacer
taaaaagagatttagctacaaacttaatacaa	Protospacer
********* ******** **** .** *   

22. spacer 2.40|1170527|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MN693025 (Marine virus AFVG_117M63, complete genome) position: , mismatch: 8, identity: 0.75

ttaaaccccaaccatttggatctgactctaat	CRISPR spacer
gtaatccccaaccatttgtatctgaataatac	Protospacer
 *** ************* ****** *   *.

23. spacer 2.43|1170707|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to AY772740 (Listonella pelagia phage phiHSIC, complete genome) position: , mismatch: 8, identity: 0.75

aaatcaacaaagcacaagcaaactacgacaaa	CRISPR spacer
cactcaacaaagcacgagcaatctacgctgga	Protospacer
 * ************.***** ***** ...*

24. spacer 2.43|1170707|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_006953 (Listonella phage phiHSIC, complete genome) position: , mismatch: 8, identity: 0.75

aaatcaacaaagcacaagcaaactacgacaaa	CRISPR spacer
cactcaacaaagcacgagcaatctacgctgga	Protospacer
 * ************.***** ***** ...*

25. spacer 2.45|1170827|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045050 (Lactobacillus reuteri strain reuteri plasmid pLTR1318, complete sequence) position: , mismatch: 8, identity: 0.75

tgtg-gctgctgaaaaggacgccagcaattgtt	CRISPR spacer
-atgctttgctgaaaaggaagtcagcaattgga	Protospacer
 .**  .************ *.*********  

26. spacer 2.52|1171247|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016847 (Carnobacterium maltaromaticum strain TMW 2.1581 plasmid pL21581-3, complete sequence) position: , mismatch: 8, identity: 0.75

ggtataaagtcaaagtcaaaagtaaggttatt	CRISPR spacer
gacttaaaatcaaagtcaaaagaaaggtgaag	Protospacer
*.. ****.************* ***** *  

27. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016791 (Bacillus flexus strain KLBMP 4941 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
tttataacaatattaaaactatccaatatatt	Protospacer
*  ****************.*** ****. . 

28. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MN270258 (Streptococcus phage phi-SgaBSJ27_rum, complete genome) position: , mismatch: 8, identity: 0.75

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
tcttcaacaaaattaaaaccatcaaatattat	Protospacer
*   .***** *****************.*  

29. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MN270259 (Streptococcus phage phi-SgaBSJ31_rum, complete genome) position: , mismatch: 8, identity: 0.75

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
tcttcaacaaaattaaaaccatcaaatattat	Protospacer
*   .***** *****************.*  

30. spacer 2.81|1172987|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MN693113 (Marine virus AFVG_25M241, complete genome) position: , mismatch: 8, identity: 0.75

gttaaagggctaggctatgacgattaagacga	CRISPR spacer
gcagacgacctaggctatgacgataaagaaga	Protospacer
*. .* *. *************** **** **

31. spacer 2.83|1173107|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 8, identity: 0.75

gtaaaccggataacgcagctttattgaccttt	CRISPR spacer
atacaacggataacgcagctttattgcctgcc	Protospacer
.** * ******************** *. ..

32. spacer 2.88|1173407|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031072 (Bacillus mycoides strain BPN401 plasmid pl395, complete sequence) position: , mismatch: 8, identity: 0.75

tcagtattaatgctggttaatgtttcagtacg	CRISPR spacer
tcagtattaatgatggtttatgttccgctcta	Protospacer
************ ***** *****.*. * ..

33. spacer 2.88|1173407|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020434 (Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

tcagtattaatgctggttaatgtttcagtacg	CRISPR spacer
tcagtattaatgatggtttatgttccgctcta	Protospacer
************ ***** *****.*. * ..

34. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to KY612839 (Vibrio phage pVco-5, complete genome) position: , mismatch: 9, identity: 0.719

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
aactgaagttgattatgagctagcactcaact	Protospacer
  .**.************** *****  **..

35. spacer 2.2|1168247|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 9, identity: 0.719

gggcagtggcaaaagttatgagtgcgttgtac	CRISPR spacer
cggcagtggcaaaagttacgagcgcaaaccgc	Protospacer
 *****************.***.**.   ..*

36. spacer 2.4|1168367|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.719

aaacggatcaaaatcaggtttaaatctaaata	CRISPR spacer
gaataatacaaaatcaggtttaactataaatc	Protospacer
.**...  *************** * ***** 

37. spacer 2.11|1168787|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to AP014181 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S40-C70, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

actatctttggtttgtgcaaactcagttatgt	CRISPR spacer
attatctttggttggtgctaactcaccaagag	Protospacer
*.*********** **** ****** . * . 

38. spacer 2.30|1169927|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 9, identity: 0.719

atgaacggcggcgagcattacgcgttccgcgt	CRISPR spacer
cgtaacggcggcgaccatgacgcgtttatctt	Protospacer
   *********** *** *******.  * *

39. spacer 2.31|1169987|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 9, identity: 0.719

gggcagtggcaaaagttatgagtgcgttgtac	CRISPR spacer
cggcagtggcaaaagttacgagcgcaaaccgc	Protospacer
 *****************.***.**.   ..*

40. spacer 2.32|1170047|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 9, identity: 0.719

gggcagtggcaaaagttatgagtgcgttgtac	CRISPR spacer
cggcagtggcaaaagttacgagcgcaaaccgc	Protospacer
 *****************.***.**.   ..*

41. spacer 2.33|1170107|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 9, identity: 0.719

gggcagtggcaaaagttatgagtgcgttgtac	CRISPR spacer
cggcagtggcaaaagttacgagcgcaaaccgc	Protospacer
 *****************.***.**.   ..*

42. spacer 2.34|1170167|32|NZ_CP011032|CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 9, identity: 0.719

atgaacggcggcgagcattacgcgttccgcgt	CRISPR spacer
cgtaacggcggcgaccatgacgcgtttatctt	Protospacer
   *********** *** *******.  * *

43. spacer 2.35|1170227|32|NZ_CP011032|CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 9, identity: 0.719

atgaacggcggcgagcattacgcgttccgcgt	CRISPR spacer
cgtaacggcggcgaccatgacgcgtttatctt	Protospacer
   *********** *** *******.  * *

44. spacer 2.36|1170287|32|NZ_CP011032|CRISPRCasFinder,CRT matches to MH552500 (CrAssphage sp. isolate ctcc615, complete genome) position: , mismatch: 9, identity: 0.719

attgtgaataacattgttttgttcatgtgata	CRISPR spacer
attttgactaacattgttttgttgagaaactt	Protospacer
*** *** *************** * . . * 

45. spacer 2.49|1171067|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_019490 (Riemerella phage RAP44, complete genome) position: , mismatch: 9, identity: 0.719

tctccccgatgaaatttacgattttttcagca	CRISPR spacer
aacacctgatgaactttacgattttttaaaaa	Protospacer
  . **.****** ************* *. *

46. spacer 2.52|1171247|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 9, identity: 0.719

ggtataaagtcaaagtcaaaagtaaggttatt	CRISPR spacer
tattgaaagtcaaagtgaaaagtgaggtgaaa	Protospacer
 .*  *********** ******.**** *  

47. spacer 2.52|1171247|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 9, identity: 0.719

ggtataaagtcaaagtcaaaagtaaggttatt	CRISPR spacer
tattgaaagtcaaagtgaaaagtgaggtgaaa	Protospacer
 .*  *********** ******.**** *  

48. spacer 2.55|1171427|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013227 (Staphylococcus aureus strain UTSW MRSA 55 plasmid UTSW55_1, complete sequence) position: , mismatch: 9, identity: 0.719

atgcttaaataaacattgaatccattcagttc	CRISPR spacer
aacaataaataaaaattgaatccatttaggaa	Protospacer
*    ******** ************.**   

49. spacer 2.69|1172267|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MG592566 (Vibrio phage 1.197.A._10N.286.54.F2, partial genome) position: , mismatch: 9, identity: 0.719

gtcaggcgtagttgcaatggatgttaaaatag	CRISPR spacer
atcaggcgtagttgcagtggttgtatatggtg	Protospacer
.***************.*** ***  * .  *

50. spacer 2.82|1173047|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MN693678 (Marine virus AFVG_250M132, complete genome) position: , mismatch: 9, identity: 0.719

acaatgaatacatctagcataaccatcttttc	CRISPR spacer
ataatgaatacatatagcataaacaccacaat	Protospacer
*.*********** ******** **.* .  .

51. spacer 2.86|1173287|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054659 (Lactobacillus reuteri strain AN417 plasmid pAN417B, complete sequence) position: , mismatch: 9, identity: 0.719

tgtaagttctgtctggccgtttaacttcttga	CRISPR spacer
ttctggaactgtgcggccgtttaacttcttgg	Protospacer
* . .*  **** .*****************.

52. spacer 2.86|1173287|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_010621 (Lactobacillus reuteri strain ATCC 55730 plasmid pLR585, complete sequence) position: , mismatch: 9, identity: 0.719

tgtaagttctgtctggccgtttaacttcttga	CRISPR spacer
ttctggaactgtgcggccgtttaacttcttgg	Protospacer
* . .*  **** .*****************.

53. spacer 2.86|1173287|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NC_015698 (Lactobacillus reuteri SD2112 plasmid pLR585, complete sequence) position: , mismatch: 9, identity: 0.719

tgtaagttctgtctggccgtttaacttcttga	CRISPR spacer
ttctggaactgtgcggccgtttaacttcttgg	Protospacer
* . .*  **** .*****************.

54. spacer 2.92|1173647|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MK075005 (Staphylococcus phage phiSP119-2, partial genome) position: , mismatch: 9, identity: 0.719

gttcaacttcactttaattgatgtttgaccgt	CRISPR spacer
cttcaacttcactttaagtgaagttagtgtca	Protospacer
 **************** *** *** *  .  

55. spacer 2.1|1168187|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MN694611 (Marine virus AFVG_250M767, complete genome) position: , mismatch: 10, identity: 0.688

ttttggagttgattatgagcaagcacaaaatc	CRISPR spacer
aatcatagctgatgatgagcaagcacaaacag	Protospacer
  *.. **.**** ***************   

56. spacer 2.6|1168487|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012477 (Arthrobacter sp. ERGS1:01 isolate water plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

acggcaaaaccgtcgacgtcgtagccgtataa	CRISPR spacer
cagccaaaaccgtcgacgtcggcgccggcgtc	Protospacer
  * *****************  ****     

57. spacer 2.26|1169687|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to NC_017363 (Helicobacter pylori Lithuania75 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

taaaaagagctttagctaaaaacacaaaaacc	CRISPR spacer
taaaatgagctttagcgaaaaacgccgtttgg	Protospacer
***** ********** ******.* .     

58. spacer 2.26|1169687|32|NZ_CP011032|PILER-CR,CRISPRCasFinder,CRT matches to MG592656 (Vibrio phage 1.286.O._10N.286.55.C4, partial genome) position: , mismatch: 10, identity: 0.688

taaaaa-----gagctttagctaaaaacacaaaaacc	CRISPR spacer
-----attcctgagctttacctaaaaacaccaaattt	Protospacer
     *     ******** ********** *** ..

59. spacer 2.51|1171187|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030843 (Acidisarcina polymorpha strain SBC82 plasmid pACPOL4, complete sequence) position: , mismatch: 10, identity: 0.688

gtcaacaatcgacactgttgtcggcgcgaaca	CRISPR spacer
aacaacaatcgacattgttgttggcgatcgtg	Protospacer
. ************.******.****   ...

60. spacer 2.64|1171967|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to MH067971 (Arthrobacter sp. strain ANT_H40 plasmid pA40H2, complete sequence) position: , mismatch: 10, identity: 0.688

gcctaggctcggcaccgccgaaaccaaagagg	CRISPR spacer
gaacgcaaacggcatcgccgaaaccaaacagg	Protospacer
*  .. .  *****.************* ***

61. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 10, identity: 0.688

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
aaaatatgaatattaaaaccatcaaaacaaaa	Protospacer
 .****  ******************     .

62. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026419 (Acinetobacter sp. ACNIH2 plasmid pACI-6db8, complete sequence) position: , mismatch: 10, identity: 0.688

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
cagtcaacaatcttataaccatcaaataagtg	Protospacer
... .****** *** ************  .*

63. spacer 2.79|1172867|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009649 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_2, complete sequence) position: , mismatch: 10, identity: 0.688

ggaattgttgagccaggtcgatttatcgacca	CRISPR spacer
tattttgttgaaccatgtcgatttatcatcag	Protospacer
 .  *******.*** ***********. * .

64. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 11, identity: 0.656

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
cttttaacaatatcaacaccatcaaattggat	Protospacer
.   *********.** **********     

65. spacer 2.66|1172087|32|NZ_CP011032|CRISPRCasFinder,CRT,PILER-CR matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 11, identity: 0.656

tgaataacaatattaaaaccatcaaatactcg	CRISPR spacer
cttttaacaatatcaacaccatcaaattggat	Protospacer
.   *********.** **********     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 644635 : 699886 71 Pseudomonas_phage(21.43%) tail,protease,portal,capsid,head,tRNA,terminase NA
DBSCAN-SWA_2 928447 : 937252 8 Tupanvirus(14.29%) NA NA
DBSCAN-SWA_3 1815999 : 1824261 10 uncultured_Caudovirales_phage(33.33%) tRNA NA
DBSCAN-SWA_4 3109280 : 3117556 8 uncultured_Mediterranean_phage(28.57%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage