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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023364 Escherichia coli strain 144 chromosome, complete genome 4 crisprs csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas14j,DinG,c2c9_V-U4,WYL 0 24 8 0
NZ_CP023363 Escherichia coli strain 144 plasmid 134q, complete sequence 0 crisprs DEDDh 0 0 10 0
NZ_CP023365 Escherichia coli strain 144 plasmid p92, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP023364
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023364_1 1167293-1168541 Orphan I-E
20 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023364_2 1195679-1196500 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023364_3 2416690-2416813 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023364_4 3115334-3115425 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 85745-85776 0 1.0
NZ_CP023364_2 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195952-1195983 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246388-246419 0 1.0
NZ_CP023364_2 2.6|1196013|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196013-1196044 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246449-246480 0 1.0
NZ_CP023364_2 2.7|1196074|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196074-1196105 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246510-246541 0 1.0
NZ_CP023364_2 2.8|1196135|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196135-1196166 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246571-246602 0 1.0
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246632-246663 0 1.0
NZ_CP023364_2 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196257-1196288 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246693-246724 0 1.0
NZ_CP023364_2 2.11|1196318|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196318-1196349 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246754-246785 0 1.0
NZ_CP023364_2 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196379-1196410 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246815-246846 0 1.0
NZ_CP023364_2 2.13|1196440|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196440-1196471 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246876-246907 0 1.0
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP025883 Escherichia coli strain 503440 plasmid p503440_100, complete sequence 74209-74240 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP025894 Escherichia coli strain 503025 plasmid p503025_100, complete sequence 77020-77051 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP025868 Escherichia coli strain 504211 plasmid p504211_100, complete sequence 18988-19019 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 CP043018 Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence 7820-7851 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 85863-85894 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_AP017612 Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence 84770-84801 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP025870 Escherichia coli strain 503829 plasmid p503829_100, complete sequence 91177-91208 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP028430 Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence 36203-36234 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP053233 Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence 88329-88360 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 33813-33844 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 CP025897 Escherichia coli strain 500465 plasmid p500465_152, complete sequence 147147-147178 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 57925-57956 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP019002 Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence 69838-69869 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP028433 Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence 94312-94343 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 NZ_CP012114 Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence 89288-89319 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK972693 Salmonella phage SI23, complete genome 20077-20108 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK770415 Salmonella phage SF11, complete genome 1521-1552 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK972694 Salmonella phage SE22, complete genome 41165-41196 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK770414 Salmonella phage SE16, complete genome 5417-5448 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK972686 Salmonella phage SF3, complete genome 24871-24902 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK972685 Salmonella phage SE10, complete genome 26090-26121 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK972687 Salmonella phage SE1 (in:P22virus), complete genome 16364-16395 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MT740315 Escherichia phage JEP4, complete genome 24063-24094 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK972692 Salmonella phage SE21, complete genome 40301-40332 1 0.969
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MF356679 Escherichia phage D6, complete genome 78029-78060 1 0.969
NZ_CP023364_4 4.1|3115360|40|NZ_CP023364|CRISPRCasFinder 3115360-3115399 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP023364_1 1.19|1168420|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1168420-1168451 32 KT898133 Aeromonas phage phiARM81ld, complete genome 45655-45686 2 0.938
NZ_CP023364_3 3.1|2416733|38|NZ_CP023364|CRISPRCasFinder 2416733-2416770 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP023364_2 2.8|1196135|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196135-1196166 32 MN855767 Bacteriophage sp. isolate 11, complete genome 31880-31911 5 0.844
NZ_CP023364_1 1.3|1167444|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167444-1167475 32 NC_016040 Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence 37866-37897 6 0.812
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NZ_CP006570 Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence 200247-200278 6 0.812
NZ_CP023364_2 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196257-1196288 32 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 100800-100831 6 0.812
NZ_CP023364_2 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196379-1196410 32 NZ_CP045381 Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence 394835-394866 6 0.812
NZ_CP023364_2 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196379-1196410 32 NZ_CP019631 Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence 62722-62753 6 0.812
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NZ_CP047145 Streptomyces sp. HF10 plasmid plas1, complete sequence 69691-69722 7 0.781
NZ_CP023364_2 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195769-1195800 32 KX349297 Cyanophage S-RIM44 isolate W2_10_0709, complete genome 146101-146132 7 0.781
NZ_CP023364_2 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195769-1195800 32 KU594607 Cyanophage S-RIM44 isolate W2_07_0710, complete genome 145822-145853 7 0.781
NZ_CP023364_2 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195769-1195800 32 NC_015288 Prochlorococcus phage Syn1, complete genome 144019-144050 7 0.781
NZ_CP023364_2 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195769-1195800 32 KX349295 Cyanophage S-RIM44 isolate Sn_08_0709, complete genome 145825-145856 7 0.781
NZ_CP023364_2 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195769-1195800 32 KX349292 Cyanophage S-RIM44 isolate Np_05_0604, complete genome 145824-145855 7 0.781
NZ_CP023364_2 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195952-1195983 32 NZ_CP036405 Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence 83754-83785 7 0.781
NZ_CP023364_2 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195952-1195983 32 NZ_CP023037 Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence 128632-128663 7 0.781
NZ_CP023364_2 2.8|1196135|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196135-1196166 32 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 103191-103222 7 0.781
NZ_CP023364_2 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196379-1196410 32 NZ_CP050254 Orbus sp. IPMB12 plasmid pIPMB12, complete sequence 17842-17873 7 0.781
NZ_CP023364_1 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167322-1167353 32 MK820013 Vibrio phage vB_VpaP_MGD2, complete genome 24310-24341 8 0.75
NZ_CP023364_1 1.4|1167505|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167505-1167536 32 MN855878 Bacteriophage sp. isolate 336, complete genome 5171-5202 8 0.75
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 234032-234063 8 0.75
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NZ_CP011450 Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence 59722-59753 8 0.75
NZ_CP023364_1 1.13|1168054|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1168054-1168085 32 MN855880 Siphoviridae sp. isolate 369, complete genome 5249-5280 8 0.75
NZ_CP023364_1 1.19|1168420|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1168420-1168451 32 MN901520 Halorubrum coriense virus Hardycor2, complete genome 16524-16555 8 0.75
NZ_CP023364_2 2.1|1195708|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195708-1195739 32 NZ_CP014802 Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence 82248-82279 8 0.75
NZ_CP023364_2 2.4|1195891|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195891-1195922 32 MG925351 Mycobacterium phage MPlant7149, complete genome 32515-32546 8 0.75
NZ_CP023364_2 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196257-1196288 32 NZ_CP016821 Rhodococcus sp. p52 plasmid pDF01, complete sequence 123752-123783 8 0.75
NZ_CP023364_2 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196257-1196288 32 NZ_CP016821 Rhodococcus sp. p52 plasmid pDF01, complete sequence 136491-136522 8 0.75
NZ_CP023364_1 1.2|1167383|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167383-1167414 32 MN340231 Escherichia phage phiv205-1, complete genome 16237-16268 9 0.719
NZ_CP023364_1 1.2|1167383|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167383-1167414 32 CP000711 Enterobacteria phage CUS-3, complete genome 12689-12720 9 0.719
NZ_CP023364_1 1.2|1167383|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167383-1167414 32 MH717096 Escherichia phage N7, complete genome 9978-10009 9 0.719
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NZ_CP011515 Mitsuaria sp. 7 plasmid, complete sequence 162356-162387 9 0.719
NZ_CP023364_1 1.13|1168054|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1168054-1168085 32 NZ_CP016463 Bosea sp. RAC05 plasmid pBSY19_1, complete sequence 542861-542892 9 0.719
NZ_CP023364_2 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1195952-1195983 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 2552746-2552777 9 0.719
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 NZ_CP020900 Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence 178777-178808 9 0.719
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 NZ_CP013589 Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence 251306-251337 9 0.719
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 NZ_CP013562 Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence 256809-256840 9 0.719
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 NZ_CP013536 Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence 653047-653078 9 0.719
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 NZ_CP013546 Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence 259879-259910 9 0.719
NZ_CP023364_2 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196196-1196227 32 NC_010997 Rhizobium etli CIAT 652 plasmid pC, complete sequence 248019-248050 9 0.719
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 MN850587 Escherichia phage mistaenkt, complete genome 62540-62571 10 0.688
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 MH791400 UNVERIFIED: Escherichia phage EcSzw-2, complete genome 63164-63195 10 0.688
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 MK562504 Enterobacteria phage CHB7, complete genome 51394-51425 10 0.688
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NC_028808 Escherichia phage SUSP1, complete genome 60791-60822 10 0.688
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 MH791413 UNVERIFIED: Escherichia phage EcSzw_1, complete genome 62597-62628 10 0.688
NZ_CP023364_1 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167627-1167658 32 NC_028935 Escherichia phage SUSP2, complete genome 58756-58787 10 0.688
NZ_CP023364_1 1.7|1167688|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167688-1167719 32 MN693290 Marine virus AFVG_25M557, complete genome 19244-19275 10 0.688
NZ_CP023364_1 1.7|1167688|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167688-1167719 32 MN693243 Marine virus AFVG_25M556, complete genome 14971-15002 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 1222563-1222594 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 1140926-1140957 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 1200643-1200674 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 1140023-1140054 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 1140918-1140949 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 1140274-1140305 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 1140909-1140940 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 1222678-1222709 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 1222662-1222693 10 0.688
NZ_CP023364_1 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167871-1167902 32 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 1222655-1222686 10 0.688
NZ_CP023364_1 1.12|1167993|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1167993-1168024 32 MN657072 Psychrobacter sp. strain ANT_P36 plasmid pA36P2, complete sequence 2874-2905 10 0.688
NZ_CP023364_1 1.13|1168054|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1168054-1168085 32 NC_010625 Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence 1903726-1903757 10 0.688
NZ_CP023364_2 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196379-1196410 32 NC_013449 Streptomyces sp. W9 plasmid pCQ3, complete sequence 5026-5057 11 0.656
NZ_CP023364_2 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT 1196379-1196410 32 NC_019307 Streptomyces sp. W75 plasmid pCQ4, complete sequence 11401-11432 11 0.656

1. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgtgcatacacacttgaacatca	Protospacer
********************************

2. spacer 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
attttcgcagcgggtaaccgcgcccggcgatc	Protospacer
********************************

3. spacer 2.6|1196013|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tttatgtggagtatcagtgcctgggtggaaag	CRISPR spacer
tttatgtggagtatcagtgcctgggtggaaag	Protospacer
********************************

4. spacer 2.7|1196074|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tggggctgagcatggctaaacaaccgaggcgc	CRISPR spacer
tggggctgagcatggctaaacaaccgaggcgc	Protospacer
********************************

5. spacer 2.8|1196135|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
gtcaactggcaccacaggatgatggcggcgaa	Protospacer
********************************

6. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
caggcgctcgacgcggcacgcagtcgggcaca	Protospacer
********************************

7. spacer 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
caggtcgaccgactggaggcggagattgtcgg	Protospacer
********************************

8. spacer 2.11|1196318|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tgttgtttttctgccggattaacgcggtgcga	CRISPR spacer
tgttgtttttctgccggattaacgcggtgcga	Protospacer
********************************

9. spacer 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
ttgtcgggcttgttcggcgcgggttgttaact	Protospacer
********************************

10. spacer 2.13|1196440|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccagcgaaggacttgctcgtgtggttaaagcc	CRISPR spacer
ccagcgaaggacttgctcgtgtggttaaagcc	Protospacer
********************************

11. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

12. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

13. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

14. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to CP043018 (Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

15. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

16. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

17. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

18. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028430 (Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

19. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053233 (Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

20. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

21. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

22. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

23. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

24. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028433 (Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

25. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

26. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

27. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

28. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

29. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

30. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

31. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

32. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

33. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

34. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

35. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MF356679 (Escherichia phage D6, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

36. spacer 4.1|3115360|40|NZ_CP023364|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

37. spacer 1.19|1168420|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to KT898133 (Aeromonas phage phiARM81ld, complete genome) position: , mismatch: 2, identity: 0.938

gacgatgagacgccctggtgtgccgcgttcgt	CRISPR spacer
gacgacgagacgccctggtgcgccgcgttcgt	Protospacer
*****.**************.***********

38. spacer 3.1|2416733|38|NZ_CP023364|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

39. spacer 2.8|1196135|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.844

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
gttaactggcaccacaagatgatggcggcttc	Protospacer
**.*************.************   

40. spacer 1.3|1167444|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_016040 (Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence) position: , mismatch: 6, identity: 0.812

tgcacgccctgccggaatctcccctcgctctc	CRISPR spacer
tgcacgccctgccggaagatcccctcacgatt	Protospacer
*****************  *******.*  *.

41. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 6, identity: 0.812

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gaccgaggcgcagagaacgacgacctgattat	Protospacer
* * * ***** *** *************** 

42. spacer 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.812

caggtcgaccgactggaggcggagattgtcgg-	CRISPR spacer
ccggtcgacccgctggaggcggaga-tgtagac	Protospacer
* ******** .************* *** *. 

43. spacer 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtcgggcttgttcggcgcgggttgttaact-	CRISPR spacer
ttgtcggtcatgttcggcgcgggct-tcaacga	Protospacer
******* * *************.* *.***  

44. spacer 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019631 (Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtcgggcttgttcggcgcgggttgttaact-	CRISPR spacer
ttgtcggtcatgttcggcgcgggct-tcaacga	Protospacer
******* * *************.* *.***  

45. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gccagcggcgctgagtacgacgac--ctgattaa	CRISPR spacer
gccagcggcgcggactacgacgacatccggct--	Protospacer
*********** ** *********  *.*..*  

46. spacer 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to KX349297 (Cyanophage S-RIM44 isolate W2_10_0709, complete genome) position: , mismatch: 7, identity: 0.781

ataaaacaacaggtgagttgggttttgagtat	CRISPR spacer
ataaaacaataggtgagttggtttacgatagt	Protospacer
*********.*********** ** .**  .*

47. spacer 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to KU594607 (Cyanophage S-RIM44 isolate W2_07_0710, complete genome) position: , mismatch: 7, identity: 0.781

ataaaacaacaggtgagttgggttttgagtat	CRISPR spacer
ataaaacaataggtgagttggtttacgatagt	Protospacer
*********.*********** ** .**  .*

48. spacer 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_015288 (Prochlorococcus phage Syn1, complete genome) position: , mismatch: 7, identity: 0.781

ataaaacaacaggtgagttgggttttgagtat	CRISPR spacer
ataaaacaataggtgagttggtttacgatagt	Protospacer
*********.*********** ** .**  .*

49. spacer 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to KX349295 (Cyanophage S-RIM44 isolate Sn_08_0709, complete genome) position: , mismatch: 7, identity: 0.781

ataaaacaacaggtgagttgggttttgagtat	CRISPR spacer
ataaaacaataggtgagttggtttacgatagt	Protospacer
*********.*********** ** .**  .*

50. spacer 2.2|1195769|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to KX349292 (Cyanophage S-RIM44 isolate Np_05_0604, complete genome) position: , mismatch: 7, identity: 0.781

ataaaacaacaggtgagttgggttttgagtat	CRISPR spacer
ataaaacaataggtgagttggtttacgatagt	Protospacer
*********.*********** ** .**  .*

51. spacer 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036405 (Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence) position: , mismatch: 7, identity: 0.781

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
cgtgacgcagcgggcagccgcgcccggcgata	Protospacer
  *  *********.*.************** 

52. spacer 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023037 (Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
cgtgacgcagcgggcagccgcgcccggcgata	Protospacer
  *  *********.*.************** 

53. spacer 2.8|1196135|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 7, identity: 0.781

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
atggacatgcaccagaagatgatggcggcgaa	Protospacer
.* .**  ****** *.***************

54. spacer 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050254 (Orbus sp. IPMB12 plasmid pIPMB12, complete sequence) position: , mismatch: 7, identity: 0.781

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
ttagtgagcttgttcggcgggggtttttaaca	Protospacer
**. .*.************ ***** ***** 

55. spacer 1.1|1167322|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK820013 (Vibrio phage vB_VpaP_MGD2, complete genome) position: , mismatch: 8, identity: 0.75

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
gtagctgactgtgcgtacacacttgaagtact	Protospacer
 * ***** *****.************   * 

56. spacer 1.4|1167505|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN855878 (Bacteriophage sp. isolate 336, complete genome) position: , mismatch: 8, identity: 0.75

agtaagccggttgattatcgcca----gggatatta	CRISPR spacer
agtaagcaggatgattatcgccaccatggcgt----	Protospacer
******* ** ************    ** .*    

57. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.75

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gcccgcggcgctgagtgcgacgaccatgctct	Protospacer
*** ************.********  ..*  

58. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 8, identity: 0.75

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gcccgcggcgctgagtgcgacgaccatgctct	Protospacer
*** ************.********  ..*  

59. spacer 1.13|1168054|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN855880 (Siphoviridae sp. isolate 369, complete genome) position: , mismatch: 8, identity: 0.75

atttttgcgcggcctgcatgaaaccagtggca	CRISPR spacer
tgttttgcggggccttcatgaaaccaggcggg	Protospacer
  ******* ***** ***********  * .

60. spacer 1.19|1168420|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN901520 (Halorubrum coriense virus Hardycor2, complete genome) position: , mismatch: 8, identity: 0.75

--gacgatgagacgccctggtgtgccgcgttcgt	CRISPR spacer
ccgccgcc--gacgctcgggtgtgccgcgttcgg	Protospacer
  * ** .  *****.* *************** 

61. spacer 2.1|1195708|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.75

tcggctcgtagaaatgcagattcgccggatta	CRISPR spacer
tgtgatcgaagaaatgcagatgcgccgggtcc	Protospacer
*  * *** ************ ******.*. 

62. spacer 2.4|1195891|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MG925351 (Mycobacterium phage MPlant7149, complete genome) position: , mismatch: 8, identity: 0.75

acaatcagatcacgatcgatgcctcgcgtgag	CRISPR spacer
tccatcagatcacggccgatgcctcgggcgtc	Protospacer
 * ***********..********** *.*  

63. spacer 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
aagatcgaccgactggaggccgagaacgcggc	Protospacer
 **.**************** **** .*. * 

64. spacer 2.10|1196257|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
aagatcgaccgactggaggccgagaacgcggc	Protospacer
 **.**************** **** .*. * 

65. spacer 1.2|1167383|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 9, identity: 0.719

ctatcagtaacaacctggtaaatatcggtttt	CRISPR spacer
acaattacaacaacctggcaaatatcggtctt	Protospacer
 .* . ..**********.**********.**

66. spacer 1.2|1167383|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 9, identity: 0.719

ctatcagtaacaacctggtaaatatcggtttt	CRISPR spacer
acaattacaacaacctggcaaatatcggtctt	Protospacer
 .* . ..**********.**********.**

67. spacer 1.2|1167383|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MH717096 (Escherichia phage N7, complete genome) position: , mismatch: 9, identity: 0.719

ctatcagtaacaacctggtaaatatcggtttt	CRISPR spacer
acaattacaacaacctggcaaatatcggtctt	Protospacer
 .* . ..**********.**********.**

68. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gctggcggtgctgaggacgacgacctgcagcg	Protospacer
**..****.****** ***********    .

69. spacer 1.13|1168054|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcgcggcctgcatgaaaccagtggca	CRISPR spacer
gtcattccgccgcctgcatgaaaccaggcgtc	Protospacer
.*. ** *** ****************  *. 

70. spacer 2.5|1195952|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
ggtcgcgcagcgggtgaccgcgctcggcggcg	Protospacer
. *. **********.*******.*****.. 

71. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

72. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

73. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

74. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

75. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

76. spacer 2.9|1196196|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

77. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN850587 (Escherichia phage mistaenkt, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

78. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MH791400 (UNVERIFIED: Escherichia phage EcSzw-2, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

79. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MK562504 (Enterobacteria phage CHB7, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

80. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_028808 (Escherichia phage SUSP1, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

81. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MH791413 (UNVERIFIED: Escherichia phage EcSzw_1, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

82. spacer 1.6|1167627|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_028935 (Escherichia phage SUSP2, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

83. spacer 1.7|1167688|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN693290 (Marine virus AFVG_25M557, complete genome) position: , mismatch: 10, identity: 0.688

tcaatacaacagcaatgctggagctggaaaaa	CRISPR spacer
ctcaagtaacatcaatgctgtagctggaaatg	Protospacer
.. * ..**** ******** ********* .

84. spacer 1.7|1167688|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN693243 (Marine virus AFVG_25M556, complete genome) position: , mismatch: 10, identity: 0.688

tcaatacaacagcaatgctggagctggaaaaa	CRISPR spacer
ctcaagtaacatcaatgctgtagctggaaatg	Protospacer
.. * ..**** ******** ********* .

85. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

86. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

87. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

88. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

89. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

90. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

91. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

92. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

93. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

94. spacer 1.10|1167871|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

95. spacer 1.12|1167993|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to MN657072 (Psychrobacter sp. strain ANT_P36 plasmid pA36P2, complete sequence) position: , mismatch: 10, identity: 0.688

tttgttttgatgatttatcagtatatgaattg	CRISPR spacer
aagattttgatgatttatcagaagatgttcag	Protospacer
   .***************** * ***  . *

96. spacer 1.13|1168054|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcgcggcctgcatgaaaccagtggca	CRISPR spacer
cgaggtgcgcagcctgcatgaaacctgtgatg	Protospacer
     *****.************** ***...

97. spacer 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 11, identity: 0.656

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
gtgttgggcttgttcggcgggggtccaggcgg	Protospacer
 ***.************** ****.   .   

98. spacer 2.12|1196379|32|NZ_CP023364|PILER-CR,CRISPRCasFinder,CRT matches to NC_019307 (Streptomyces sp. W75 plasmid pCQ4, complete sequence) position: , mismatch: 11, identity: 0.656

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
gtgttgggcttgttcggcgggggtccaggcgg	Protospacer
 ***.************** ****.   .   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1212855 : 1219995 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_2 1822314 : 1831757 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_3 1847460 : 1911143 71 Escherichia_phage(51.11%) tRNA,integrase,capsid,holin,lysis,tail,head,portal,terminase,plate attL 1874622:1874656|attR 1906821:1906855
DBSCAN-SWA_4 1957661 : 1966377 8 Enterobacteria_phage(42.86%) NA NA
DBSCAN-SWA_5 2676309 : 2785441 98 Escherichia_phage(46.3%) tRNA,integrase,lysis,tail,terminase,transposase attL 2752121:2752136|attR 2794531:2794546
DBSCAN-SWA_6 3376995 : 3424177 63 Enterobacteria_phage(56.14%) protease,integrase,capsid,lysis,tail,head,portal,terminase attL 3373767:3373781|attR 3424251:3424265
DBSCAN-SWA_7 3987087 : 4060090 58 Ralstonia_phage(11.11%) plate,tRNA,protease,transposase NA
DBSCAN-SWA_8 4291880 : 4342653 61 Enterobacteria_phage(36.0%) integrase,capsid,holin,tail,head,portal,terminase attL 4303184:4303198|attR 4344634:4344648
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP023363
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 8081 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_2 12355 : 14503 2 Enterobacteria_phage(50.0%) transposase NA
DBSCAN-SWA_3 21141 : 23144 2 Macacine_betaherpesvirus(50.0%) integrase attL 15792:15806|attR 35644:35658
DBSCAN-SWA_4 27039 : 31198 4 Cedratvirus(50.0%) NA NA
DBSCAN-SWA_5 42399 : 47616 5 Macacine_betaherpesvirus(66.67%) transposase NA
DBSCAN-SWA_6 51770 : 59758 11 Thalassomonas_phage(25.0%) NA NA
DBSCAN-SWA_7 67858 : 68080 1 Vibrio_virus(100.0%) NA NA
DBSCAN-SWA_8 91071 : 94451 5 Xanthomonas_phage(33.33%) NA NA
DBSCAN-SWA_9 98982 : 120168 22 Escherichia_phage(27.27%) transposase,integrase attL 97495:97510|attR 119110:119125
DBSCAN-SWA_10 132198 : 133233 1 Escherichia_coli_O157_typing_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage