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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023311 Vibrio anguillarum strain VIB12 isolate Sea bass chromosome 2, complete sequence 1 crisprs RT,csa3,cas3,cas5f,cas7f,cas6f 0 0 10 0
NZ_CP023312 Vibrio anguillarum strain VIB12 isolate Sea bass plasmid p292, complete sequence 0 crisprs RT,cas14j 0 0 4 0
NZ_CP023310 Vibrio anguillarum strain VIB12 isolate Sea bass chromosome 1, complete sequence 1 crisprs DEDDh,TnsE_C,WYL,cas3,csa3,RT,DinG,csx1 0 0 20 0

Results visualization

1. NZ_CP023311
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023311_1 1154925-1155008 Unclear NA
1 spacers
cas6f,cas7f,cas5f

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 9078 : 158713 111 Clostridium_phage(14.29%) transposase,plate NA
DBSCAN-SWA_2 166583 : 248185 54 Escherichia_phage(15.0%) protease,transposase NA
DBSCAN-SWA_3 329758 : 390394 35 Hokovirus(20.0%) transposase NA
DBSCAN-SWA_4 399497 : 596925 183 Vibrio_phage(15.91%) tRNA,transposase,integrase attL 488752:488767|attR 586906:586919
DBSCAN-SWA_5 600481 : 773700 182 Vibrio_phage(32.0%) transposase NA
DBSCAN-SWA_6 786653 : 839673 38 Bacillus_virus(25.0%) holin,transposase,protease NA
DBSCAN-SWA_7 863684 : 913571 39 Planktothrix_phage(18.18%) transposase NA
DBSCAN-SWA_8 944509 : 1071375 105 Escherichia_phage(17.39%) tRNA,transposase NA
DBSCAN-SWA_9 1074782 : 1171954 54 uncultured_Caudovirales_phage(15.79%) transposase NA
DBSCAN-SWA_10 1180540 : 1235898 41 uncultured_Caudovirales_phage(20.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP023310
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023310_1 2489257-2489423 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 845 : 59061 51 Burkholderia_phage(18.18%) tRNA,integrase,transposase attL 2348:2363|attR 41752:41767
DBSCAN-SWA_2 225365 : 305813 56 Vibrio_phage(18.18%) tRNA,transposase,protease NA
DBSCAN-SWA_3 385101 : 450499 49 Staphylococcus_phage(16.67%) integrase,tRNA,protease,transposase attL 421261:421320|attR 452195:452981
DBSCAN-SWA_4 467446 : 475943 8 uncultured_Mediterranean_phage(28.57%) transposase NA
DBSCAN-SWA_5 639064 : 703922 53 uncultured_virus(18.75%) transposase,integrase attL 632243:632257|attR 643069:643083
DBSCAN-SWA_6 718394 : 785222 41 Vibrio_phage(20.0%) tRNA,integrase,transposase attL 736297:736356|attR 758362:759459
DBSCAN-SWA_7 855900 : 925630 60 Leptospira_phage(18.75%) tRNA,transposase NA
DBSCAN-SWA_8 1027784 : 1091478 57 Burkholderia_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_9 1145947 : 1192599 42 Leptospira_phage(18.18%) transposase NA
DBSCAN-SWA_10 1358481 : 1409816 43 Escherichia_phage(16.67%) tRNA,plate,transposase,protease NA
DBSCAN-SWA_11 1473796 : 1539806 49 Bacillus_virus(14.29%) transposase NA
DBSCAN-SWA_12 1547198 : 1643051 54 uncultured_Caudovirales_phage(28.57%) transposase NA
DBSCAN-SWA_13 1672261 : 1718144 53 Vibrio_phage(56.25%) integrase,transposase,protease attL 1675431:1675446|attR 1709552:1709567
DBSCAN-SWA_14 1721676 : 1778785 53 Leptospira_phage(26.67%) tRNA,transposase NA
DBSCAN-SWA_15 2057929 : 2120708 54 Leptospira_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_16 2209823 : 2270722 50 Leptospira_phage(22.22%) transposase,integrase,protease attL 2217281:2217298|attR 2268760:2268777
DBSCAN-SWA_17 2372874 : 2425464 50 Burkholderia_phage(33.33%) tRNA,integrase,transposase attL 2376580:2376639|attR 2433012:2434361
DBSCAN-SWA_18 2506524 : 2559846 47 Staphylococcus_phage(28.57%) tRNA,protease,transposase NA
DBSCAN-SWA_19 3055177 : 3159717 96 Leptospira_phage(23.53%) tRNA,bacteriocin,transposase,integrase attL 3102970:3103029|attR 3148354:3150729
DBSCAN-SWA_20 3187510 : 3237091 33 Bacillus_phage(25.0%) transposase,integrase attL 3187451:3187510|attR 3212768:3213868
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP023312
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3310 : 53762 46 Leptospira_phage(38.46%) transposase NA
DBSCAN-SWA_2 62784 : 145603 60 Mycobacterium_phage(29.41%) transposase,integrase attL 64889:64948|attR 125770:127137
DBSCAN-SWA_3 161501 : 197471 48 Leptospira_phage(28.57%) transposase NA
DBSCAN-SWA_4 208793 : 227985 29 Leptospira_phage(20.0%) transposase,integrase attL 200605:200618|attR 217294:217307
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage