CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	3 crisprs	csa3,RT	0	3	142
NZ_CP019485	Sinorhizobium meliloti strain B401 chromosome, complete genome	3 crisprs	WYL,cas3,csa3	1	0	3
NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	1 crisprs	DEDDh	0	1	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019485_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019485_1

173772-173918

Orphan

Consensus_repeat	Method
TCTCCCCGCATGCGGGGAGAAGGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP019485_1

>merge|NZ_CP019485|1|173772-173918|CRISPRCasFinder
TCTCCCCGCATGCGGGGAGAAGGGAATCGCGGGTTCGCCTTCGCACCATCTCCACACGCAGGCGCGCCGTGGCGTACGTCCCCTCTCCCCGCATGCGGGGAGAGGGTTAGGGTGAGGGGCGGTCGTCCCCGCGCGCGGGGAGAAGGT

>NZ_CP019485|1|1|173772-173918|CRISPRCasFinder
TCTCCCCGCATGCGGGGAGAAGGG	AATCGCGGGTTCGCCTTCGCACCATCTCCACACGCAGGCGCGCCGTGGCGTACGTCCCC
TCTCCCCGCATGCGGGGAGAGGGT	TAGGGTGAGGGGCGGT
CGTCCCCGCGCGCGGGGAGAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019485.1\|WP_014529988.1\|162808_163537_+\|pilus-assembly-protein-CpaD	unknown	unknown	gnl\|CDD\|227748
NZ_CP019485.1\|WP_010968389.1\|172857_173712_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP019485.1\|WP_010968385.1\|166435_167446_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|227300
NZ_CP019485.1\|WP_010968393.1\|182732_183752_+\|glucokinase	unknown	unknown	gnl\|CDD\|234716
NZ_CP019485.1\|WP_010968384.1\|164976_166377_+\|CpaF-family-protein	unknown	unknown	gnl\|CDD\|227297
NZ_CP019485.1\|WP_003531957.1\|178951_180811_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP019485.1\|WP_003531955.1\|182290_182671_+\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|224716
NZ_CP019485.1\|WP_010968388.1\|171025_172417_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|223338
NZ_CP019485.1\|WP_003537743.1\|172504_172849_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP019485.1\|WP_010968387.1\|170085_170895_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227343
NZ_CP019485.1\|WP_010968394.1\|183860_185666_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP019485.1\|WP_010968383.1\|163559_164846_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|227298
NZ_CP019485.1\|WP_010968391.1\|174918_176547_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226641
NZ_CP019485.1\|WP_010968395.1\|185683_186502_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP019485.1\|WP_003537933.1\|168665_169829_+\|IS4-like-element-ISRm16-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP019485.1\|WP_010968386.1\|167453_168437_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975
NZ_CP019485.1\|WP_095919847.1\|176555_177689_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226690
NZ_CP019485.1\|WP_010968392.1\|181102_182170_+\|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl\|CDD\|226293
NZ_CP019485.1\|WP_003531958.1\|177688_178771_-\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|226642
NZ_CP019485.1\|WP_010968390.1\|173948_174908_-\|glyoxylate/hydroxypyruvate-reductase-A	unknown	unknown	gnl\|CDD\|240641

Protein	Function_ID	Function_description	E-value
NZ_CP019485.1\|WP_014529988.1\|162808_163537_+\|pilus-assembly-protein-CpaD	gnl\|CDD\|227748	COG5461, COG5461, Type IV pili component [Cell motility and secretion].	3.19225e-111
NZ_CP019485.1\|WP_010968389.1\|172857_173712_+\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.21182e-26
NZ_CP019485.1\|WP_010968385.1\|166435_167446_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	3.38407e-115
NZ_CP019485.1\|WP_010968393.1\|182732_183752_+\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	7.38484e-165
NZ_CP019485.1\|WP_010968384.1\|164976_166377_+\|CpaF-family-protein	gnl\|CDD\|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	0
NZ_CP019485.1\|WP_003531957.1\|178951_180811_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP019485.1\|WP_003531955.1\|182290_182671_+\|methylglyoxal-synthase	gnl\|CDD\|224716	COG1803, MgsA, Methylglyoxal synthase [Carbohydrate transport and metabolism].	2.60323e-72
NZ_CP019485.1\|WP_010968388.1\|171025_172417_+\|aminopeptidase	gnl\|CDD\|223338	COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism].	0
NZ_CP019485.1\|WP_003537743.1\|172504_172849_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.39809e-11
NZ_CP019485.1\|WP_010968387.1\|170085_170895_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|227343	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].	1.63751e-80
NZ_CP019485.1\|WP_010968394.1\|183860_185666_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP019485.1\|WP_010968383.1\|163559_164846_+\|transcriptional-regulator	gnl\|CDD\|227298	COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion].	6.1818e-120
NZ_CP019485.1\|WP_010968391.1\|174918_176547_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226641	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only].	0
NZ_CP019485.1\|WP_010968395.1\|185683_186502_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.01351e-123
NZ_CP019485.1\|WP_003537933.1\|168665_169829_+\|IS4-like-element-ISRm16-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.69173e-26
NZ_CP019485.1\|WP_010968386.1\|167453_168437_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	7.10359e-56
NZ_CP019485.1\|WP_095919847.1\|176555_177689_-\|ABC-transporter-permease	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP019485.1\|WP_010968392.1\|181102_182170_+\|penicillin-insensitive-murein-endopeptidase	gnl\|CDD\|226293	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane].	5.68793e-158
NZ_CP019485.1\|WP_003531958.1\|177688_178771_-\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP019485.1\|WP_010968390.1\|173948_174908_-\|glyoxylate/hydroxypyruvate-reductase-A	gnl\|CDD\|240641	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family. This group contains a variety of proteins variously identified as glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase) and other enzymes of the 2-hydroxyacid dehydrogenase family. GDH catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. 2-hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.07536e-138

>NZ_CP019485.1|WP_010968389.1|172857_173712_+|C40-family-peptidase
MPEVLDRRLNAYREDIAEARLRGLVEAKRFVEGTPAAVSVPVTPLRARPEAGCGTDTELLYGETVRVLDVADGWAWVRSDLDGYVGYVPENVVQPPQAPATHLVAVPRTFVYRGADLRFPQAFALSMGSRIAVVGEAETRGTRYFLLDGGLAIVADHCIPAAGALTEDYVAIAARFLETPYLWGGRSGFGIDCSGLVQLAMQMAGRNAPRDSDMQASGLGRAIEREELTRGDLVFWKGHVAIMEDEKTLLHANGHTMTVAREGLEDAIRRIGWLYAQPTGYRRP
>NZ_CP019485.1|WP_003537743.1|172504_172849_+|winged-helix-turn-helix-transcriptional-regulator
MPVELTPSQALGLWHAVSLEQVRVDSRDLTLRQMAILLQIYLVPPPHTVRGLAASLGVTKPVITRALDTMGALGLVDRIRDERDRRNVIIKRTVEGALYLEKFGDLIINQGRKM
>NZ_CP019485.1|WP_010968388.1|171025_172417_+|aminopeptidase
MAPFQFIERQSPFNTSNGKTLPIFAVTPAHIETGSIDPIALDWAKKAGFKAESGAVLLIPSADGHLGGALFGLGANPSDEPFLTGKLARALPAGKWHIETAPLTANRLALGYGLGSYRFERYKSAKTDAPTLLIPADSDATDIKRQLAGVFLARDLINTPTNDMGPEALEAAFRALAAHYKADVSVISGEALLTENFPLVHTVGRASAEAPRLLEMRWGRKGHRKVTLVGKGVCFDTGGLDIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENSISANAFRPGDIYKSRKGLTVQIDNTDAEGRLILADALAYADEEKTDLVVDMATLTGAARVALGPDLPPFFTDDDDLARDLAEASLTVDDPVWRMPLYRGYDKDVSARIADLTNAPSGGMAGSITAALFLKRFVTNAKSWVHFDIFGWAQSERPHSPIGGEAQAIRALYHHIGRIAG
>NZ_CP019485.1|WP_010968387.1|170085_170895_-|tetratricopeptide-repeat-protein
MTMQDNFSFSLRRLATGVAVAMVALSLSACAGQQGRKELTTGSIPKLTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEAETIAGQELTSEQAEANVAYLRSVLSQQGAWKQLAKAD
>NZ_CP019485.1|WP_003537933.1|168665_169829_+|IS4-like-element-ISRm16-family-transposase
MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVALIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALLAGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGILDITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLALVAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLERSAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAARLARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA
>NZ_CP019485.1|WP_010968386.1|167453_168437_+|type-II-secretion-system-F-family-protein
MAGWIETLTDPNILVAALVSMAVLATFYSLVAPLLERGDLAKRMKSVATEREQIRARERARLNAEATTGRASLRAQHNTSVREIVERLNLRKALVDDNTVNRLKTAGYRSQNALNTFLFARFCLPFLFLTVAVLYIFVLGNFADKPIMVRVSFAIGFAYVGFYAPNIFIANAISKRQQSIRRAWPDALDLLLICVESGVSMELAMRRVADEIAVQSPPLAEELVLTTAELSFLPERRIALENLGLRTGLDEVKSVTQALIQADRYGTPVAQALRVLAQESRDQRMTAAEKKAAALPPKLTVPMILFFLPVLVAVILGPAGIQVADKF
>NZ_CP019485.1|WP_010968385.1|166435_167446_+|type-II-secretion-system-F-family-protein
MFGIDITVLGLAGLVALAAAALAYGVLYPQIETEKKAEGRLRRVSASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSISLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRWIVGSMVKRRCRKFLDEFPNSLDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVSALSMEAKASACIIGALPFIVATLVYLTSPDYMMVLFTDPRGHIIMGASAVWMSIGIWVMRNMINFDI
>NZ_CP019485.1|WP_010968384.1|164976_166377_+|CpaF-family-protein
MPAVQPVPVERSAAPVLGETVAAPSRPQAAAPPQRRRAPRAEDYYDTKSQVFSALIDTIDLSQLSKLDIESAREEIRDIVNDIITIKNFAMSISEQEELLDDICNDVLGYGPLEPLLARDDIADIMVNGAGQIFIEVGGKVEESEIRFRDNGQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAVLLQIIGRVRCNIVISGGTGSGKTTLLNCLTRYIDSTERIITCEDSAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRMESMIAMGGYTLPARTVREIISGSVDVIIQASRLRDGSRRITHITEVTGMEGDVIITQDLMRYEIDGEDANGRIVGRHVSTGIGRPHFWDRARYFNEDKRLAATLDAMEKQQ
>NZ_CP019485.1|WP_010968383.1|163559_164846_+|transcriptional-regulator
MNAIEYTIDSGGTGDWPADGTRPGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAANTFAGASTPNLIILETATEPGALLSELAPLAEVCDPSTRVIVIGRHNDIALYRELIRNGISEYMVAPVGMADMLSAVSAIFVDPEAEPLGRSLAFIGAKGGCGSSVIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRLLTRCSEHLSLLAAPSMLDRAYDFETGAFQPILEILQRSAPVSVLDLPHGWTDWTRSVLSAADEVVITAAPDLASLRNAKNLLDALKKLRPNDKVPHLVLNQVGVPKRPEIAPDEFCASLEIEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFAQLSHLLTGRTAIKKARRGGLGKVLAKLGRR
>NZ_CP019485.1|WP_014529988.1|162808_163537_+|pilus-assembly-protein-CpaD
MQKRSAARTSLERQPPMALNRLPHRVVLYAIVAALLAGCASKDKLATGALPDDYRTRHPIVLTEGERTIDIPIASGDTRLTQGTRDVIRGFAAEYRNASSSVIQIMLPRGSVNGHAAQIVRKDIRRLLAASGVSPKKMIETTYDASVTGDAAPIRLSYVAITAQTAPCGAWPEDLALNTLENRNYYNFGCATQSNLAAQIANPTDLVGPRQMSPIDAEQRGQVIDSWRGTDKGDGGTTIVFN
>NZ_CP019485.1|WP_010968390.1|173948_174908_-|glyoxylate/hydroxypyruvate-reductase-A
MPAKSPVIVDLKFIPEEVEAALAGAFPGREVIDLADPAHQERDLSGIDYAVVWKSAPDLFSRAPDLKVVFSGGAGVDHVLTLPGLPDVPLVRFVDRTLTTRMSEWVMMQCLLHLRQHRAYEALAKKHEWRDLSQPEAADVTVGIMGMGVLGQDAARKLAAMGFKVIGWSRSKRVIEGVETYDAAGLDAFLGRTDFLVGLLPLTPDTRGIFNAALFAKLSRNGPFGAPVFINAGRGGSQVEADILECLDSGVLGGASLDVFEREPLSPESRFWDMPNVYVTPHVAASSDVRALFVHVEHQIARFESGLPLEHVVDKVAGY
>NZ_CP019485.1|WP_010968391.1|174918_176547_-|ABC-transporter-ATP-binding-protein
MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLASEPRGEPPPSDASRPIVIEAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRLISSKGRIAFVGEDIDAYSFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGERDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTEDYTKALMAAAFNLEAVNLAAVHQ
>NZ_CP019485.1|WP_095919847.1|176555_177689_-|ABC-transporter-permease
MSTATAYAGAPEKGWLTPIGRRRWQNFKANRRGYWSLWLFLLLFGLSLFAEFIANDKPILASYKGEILVPVLFDYPEEKFGGFLAETDYRSDFIRDEIGANGWMIWPPIRYSYQTVNSSIPHSAPTPPFWLMSEEERCSAYPQGADDPGCIAGNLNWLGTDDQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFILLGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNCTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR
>NZ_CP019485.1|WP_003531958.1|177688_178771_-|microcin-C-ABC-transporter-permease-YejB
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPVIDLIIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTLLTKNSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
>NZ_CP019485.1|WP_003531957.1|178951_180811_-|ABC-transporter-substrate-binding-protein
MPNFCRTVKPGLAASLLTAALLLLPPASNAEEQPVWHHATSSIGEPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILAKGEVATGVSSLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSFDMVKEHNPLFSNYYRHVISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKIASFQAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYAFFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPAMKDGRVIREEIENPLRATGIMQAFVPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGTELASSGLPEGREKEILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAKTGEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGIWAQTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRALDRVLLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMDFPDAWWSKNTAAK
>NZ_CP019485.1|WP_010968392.1|181102_182170_+|penicillin-insensitive-murein-endopeptidase
MKFDARAALRRCGSTVLALIMGVSLVSAEAAANDAPPAKELFGAKDLPMQAAPASFGFYSKGCLAGGVAIPTDGPTWQAMRLSRNRRWGHPAMIALIERFSHDAVEKIGWPGLLLGDISQPRGGPMLSGHASHQIGLDADIWLTPMPQRTLSYQERETISATSMLDKSKFLTVDPSIWTPSHARLIMMAASYPQVERVFVNPAIKKKLCDTWRGDRAALGKVRPIYGHDYHFHIRIKCPPGSKGCKDQAVVPAGDGCDKSLAWWFTDEPWAKPKQKPGAKPPKPKFAKLADLPKACALVLNGPAPASEQEATYGTAYRAPAAIPAAATSIEAVIEAAGEAPLANIPVPSPRPGLQ
>NZ_CP019485.1|WP_003531955.1|182290_182671_+|methylglyoxal-synthase
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWKIVATGTTGGRVLDVCPALDIVRLKSGPLGGDQQIGALIATGDVDCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
>NZ_CP019485.1|WP_010968393.1|182732_183752_+|glucokinase
MPNASEHSFPFPILIGDIGGTNARFALLTDAYGEPKQLAPIRTGDFATIEEAMQKGILDKTSVQPRSAILAVAGPIKGDEIPLTNAGWVIRPKDMLAGLGLEDVLVINDFEAQALAIAAPADQDVVQIGGGAVRPFHSRVVLGPGTGLGVAGLVYAQHTWIPVPGEGGHVDIGPRTERDFRIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEEAVLADQAAVTTSALSGADAAAVETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALTKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEGRRWRR
>NZ_CP019485.1|WP_010968394.1|183860_185666_+|ABC-transporter-ATP-binding-protein
MNAKDRNKRAVDSETITGILKRVIAENGRDHIRGYAFAIACLVVVAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQAVALSKIGNNIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTSIARDLLTLIGLVVVMFSKDWLLSLIVFFVAPPLLLGLRYISRRLRLATREAVEVNSRVLGAMQETIQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTETFAGLAISSVLAYAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNARMIYEILDTVPHQRDRPDATELRLGEATVELRDVRFAYGTGEEILKGVSFRAEGGKTTALVGPSGAGKSTIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIRDNIRYGRPDATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARALVRNAPVLLLDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGIVVEEGSHEELARRPDGLYARLHNLQGSGADTVAEAQIL
>NZ_CP019485.1|WP_010968395.1|185683_186502_+|4-hydroxy-tetrahydrodipicolinate-reductase
MNETDMKLVVVGAAGRMGQTLIRIIHETAGVRLHAAIERTGSPFIGRDAGELAGAGPMGVAVTDKPLEAFVEAEGVLDFTAPAATVEFAGLAAQARIVHVVGTTGCSADDEARIRAAARHARVIKSGNMSLGVNLLGVLTEKAARALPAGGWDIEILEMHHKHKVDAPSGTALLLGEAAARGRGIDLADHSVRVRDGHTGARPEGSIGFATLRGGSVIGEHSVVIAGEGEMVTLSHSATDRSIFARGAVAAALWGRSRKPGFYSMLDVLGLD

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Crispr_ID: NZ_CP019485_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019485_2

1091403-1091513

Orphan

Consensus_repeat	Method
GGGCGAAGGGCCGGTCTATCCGAACATGTGAATGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019485_2

>merge|NZ_CP019485|2|1091403-1091513|CRISPRCasFinder
GGGCGAAGGGCCGGTCTATCCGAACATGTGAATGTCCGGAGAGGCAGGCCCGTACGGACTCCCGCCAGGAGAAAACGGGCGAAGGGCCGGTTTATCCGAACATGTGAATGT

>NZ_CP019485|2|2|1091403-1091513|CRISPRCasFinder
GGGCGAAGGGCCGGTCTATCCGAACATGTGAATGT	CCGGAGAGGCAGGCCCGTACGGACTCCCGCCAGGAGAAAAC
GGGCGAAGGGCCGGTTTATCCGAACATGTGAATGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019485.1\|WP_010968992.1\|1074102_1075500_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP019485.1\|WP_010968996.1\|1084266_1085205_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP019485.1\|WP_003527334.1\|1093140_1094028_+\|proline/glycine-betaine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226644
NZ_CP019485.1\|WP_003527346.1\|1085214_1086504_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP019485.1\|WP_010968998.1\|1088209_1089499_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP019485.1\|WP_010969001.1\|1094117_1095131_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|274313
NZ_CP019485.1\|WP_003527321.1\|1100293_1101796_-\|AMP-nucleosidase	unknown	unknown	gnl\|CDD\|236222
NZ_CP019485.1\|WP_010968997.1\|1087276_1088137_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381680
NZ_CP019485.1\|WP_010968994.1\|1078505_1080824_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP019485.1\|WP_010969002.1\|1095231_1095633_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP019485.1\|WP_010969000.1\|1091921_1092920_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270359
NZ_CP019485.1\|WP_003527345.1\|1086768_1086924_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019485.1\|WP_003527320.1\|1101875_1102196_-\|YnfA-family-protein	unknown	unknown	gnl\|CDD\|224656
NZ_CP019485.1\|WP_095920168.1\|1075534_1078495_+\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237612
NZ_CP019485.1\|WP_010968995.1\|1081186_1083841_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585
NZ_CP019485.1\|WP_010969005.1\|1098193_1099213_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP019485.1\|WP_003527322.1\|1099308_1100265_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP019485.1\|WP_010969003.1\|1095771_1096698_+\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP019485.1\|WP_095919948.1\|1096713_1098201_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP019485.1\|WP_003527344.1\|1086961_1087138_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019485.1\|WP_010969001.1\|1094117_1095131_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|274313	TIGR02817, Putative_oxidoreductase_transmembrane_protein, zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. [Energy metabolism, Fermentation].	0
NZ_CP019485.1\|WP_010968996.1\|1084266_1085205_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.33806e-16
NZ_CP019485.1\|WP_003527334.1\|1093140_1094028_+\|proline/glycine-betaine-ABC-transporter-permease	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	2.97932e-138
NZ_CP019485.1\|WP_003527346.1\|1085214_1086504_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41852e-81
NZ_CP019485.1\|WP_010968998.1\|1088209_1089499_-\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_CP019485.1\|WP_010968992.1\|1074102_1075500_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.58696e-52
NZ_CP019485.1\|WP_003527321.1\|1100293_1101796_-\|AMP-nucleosidase	gnl\|CDD\|236222	PRK08292, PRK08292, AMP nucleosidase; Provisional.	0
NZ_CP019485.1\|WP_010968997.1\|1087276_1088137_-\|uracil-DNA-glycosylase	gnl\|CDD\|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	2.76855e-63
NZ_CP019485.1\|WP_010968994.1\|1078505_1080824_-\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.01082e-54
NZ_CP019485.1\|WP_010969002.1\|1095231_1095633_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	3.33936e-42
NZ_CP019485.1\|WP_010969000.1\|1091921_1092920_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270359	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.87733e-106
NZ_CP019485.1\|WP_095920168.1\|1075534_1078495_+\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237612	PRK14108, PRK14108, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
NZ_CP019485.1\|WP_010968995.1\|1081186_1083841_-\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0
NZ_CP019485.1\|WP_010969005.1\|1098193_1099213_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	3.67535e-71
NZ_CP019485.1\|WP_003527320.1\|1101875_1102196_-\|YnfA-family-protein	gnl\|CDD\|224656	COG1742, COG1742, Uncharacterized conserved protein [Function unknown].	3.23612e-41
NZ_CP019485.1\|WP_010969003.1\|1095771_1096698_+\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	4.46621e-74
NZ_CP019485.1\|WP_095919948.1\|1096713_1098201_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.77467e-51
NZ_CP019485.1\|WP_003527322.1\|1099308_1100265_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	8.0146e-08

>NZ_CP019485.1|WP_010968998.1|1088209_1089499_-|Hsp70-family-protein
MASALGLDFGTTNSVLAQTEGASTRSIVVESPTGRSDTTRTALSFLKDAGPSPLKVEAGQAAIREFIDNPGECRFLQSIKTFAASALFQGTLIFGKRYEFEDLMQRFLTRLRDYAGNNWEATFRRVVIGRPVHFAGANPDEKLALERYNRALTRMGFPEVHYVYEPVAAAFYFARNLDRDATVLVADFGGGTTDYSIIRFESQAGRLTATPIGHSGVGIAGDHFDFRIIDNIVSPLIGKGSLFKSFDKLLEVPSSYYANFGRWNQLSIFKTLRDFTELKKLVRASLEPEKLESFVELIEHDEGYPLYQAVSATKMRLSQAEETEFAFAPLGERARRTVRRDEFEGWIAPDLARIEEALDEVLSTTATTPDGIDKVFLTGGTSFVPAVRRLFENRFGKERIESGGELLSIAHGLALIGERDDIAAWTAAA
>NZ_CP019485.1|WP_010968997.1|1087276_1088137_-|uracil-DNA-glycosylase
MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAAEPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCNLRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVLLANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFGGETIHQLRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRLG
>NZ_CP019485.1|WP_003527344.1|1086961_1087138_-|hypothetical-protein
MTARYRPIHSSFETLRYAGASSRTPFNSFGSAANEQLTAIGLARTTRPAQIFAEFIQR
>NZ_CP019485.1|WP_003527345.1|1086768_1086924_-|hypothetical-protein
MSKPLDSIRALVDTISDIRTAVRASREYSRLSIASDGRRVHDGAASRLLPS
>NZ_CP019485.1|WP_003527346.1|1085214_1086504_-|MFS-transporter
MLANFASVFSLMLSTFLMMVAFGLQSYVIPVRSVAESWSTLTISIFATGYTLGFTLSCIVTPKFVLRVGHVRVFTALITLLSIAILMCGLVVDWRAWIGFRAVSGFAIAGSYLVIESWLNERVTNENRGLLFSLYLITTMVGTIGGQYLVPLGDPSNTSLFILCGVLFSLALLPTALSSSPMPAPPARANFDIPALYRRSPVAVVGGFLAGALSGAWLNLGGVFTQKIGLSTGEGATLLASLLAGSAISQVPIGRASDRMDRRIVMVACGIAGVVSCLAMSVSIASSPPVLYALAACIGTVLFPIYALNVAHANDLARPDEYVEISSGLMITYGLGTISGPLMVGPVMDRFGPVALFIALAVYFALYSGYAAWRILQREQHDGLVAKTDFQATTVLPTPGPDVTGPLAQQDAGELIEDDTVPAWEQRAE
>NZ_CP019485.1|WP_010968996.1|1084266_1085205_+|DMT-family-transporter
MDADDASPMKGIVLKVLSVVVFVCMSTCIKAAGDDIPTGQITFYRSAFAMVPILGFLACRGALRDAFRTTDITGHLVRGFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLGEIVRLYRWSAVFVGLAGVFIITWPRLTLFNEGGFGSAEAMGAVAVLLSAALGATAMVLVRKLVQKERTHTIVLYFSLSAAVFSLATLPFGWSELSWQAFVLLTIAGFCGGVGQILLTESYRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHRLGLERKGARKHVTPQG
>NZ_CP019485.1|WP_010968995.1|1081186_1083841_-|aminopeptidase-N
MRTNTGQIVHLENYRPTDFVLERVDLTFELDPRETKVEARMIFHRREGVSPSAPLVLDGDELTMTGLLLDQVAVPGTLYEATDDTLTIRGLPEAAPFEITVTTALSPETNTKLMGLYRTSDVYCTQCEAEGFRRITYFPDRPDVLAVYTVNIIADKASAPLLLSNGNYLGGADMGDGRHFASWFDPHPKPSYLFALVAGDLGVVEDAFTTASGRDVALKIYVEHGKEPRAAYAMDALKRSMKWDEEVFGREYDLDIFMIVAVSDFNMGAMENKGLNIFNDKYVLADPETATDADYANIEAIIAHEYFHNWTGNRITCRDWFQLCLKEGLTVYRDHEFSADMRSRAVKRIAEVRHLKSEQFPEDAGPLAHPVRPTQYREINNFYTTTVYEKGSEVTRMIATILGRDLFKKGMDLYFERHDGQAVTIEDFIACFEAASGRDLKQFSLWYHQAGTPLVTATGTYDAARQTYTLSLEQTVPPTPGQSSKAPMHIPLRFGLLLPDGSEARPSAVSGAEITGDVLHLTERKQTVTFSGIPSEPVPSFNRGFSAPVNLHLTQSAEHRALIARHETDLFARWQALNAMALDNLVKAAAEARTGQPIDCDDALVDALLAAAGDDRLEPAFRSQVMSLPSETDIGREIGSNNDPDAIYAGRQAILAAIATAGKDTFARLVNEMSLSGPFRPDADSAGRRALRNSGLSYLVYADGSPDKAADAFSSANNMTDLSQALTLLAHRFPDARETADALAVFKKRFADNALVIDKWFAIQATIPGASTLDRVRALMSDPLFNASNPNRVRSLVGTFAFANATGFNRIDGEGYRFLARQILDIDTRNPQLAARILTSMRSWRSLEKIRAGHARSALEEIARASNLSADVSDIVDRMLKDEH
>NZ_CP019485.1|WP_010968994.1|1078505_1080824_-|PAS-domain-containing-protein
MADARRGSAAEGRLRLKFPGFSGLEREFIEQAKIFAEPASQKLAMAEPMLKRSIPVLIIAFLLIVAISRMSGIMDEHARMEASSRRTVSLAAAAAAGVFQTGGSELFAEGRRWEVERRLTEFLPAEILDAGIFLLTVRRDGRVFAGTQDGVHLIGRTLSAIAPEVATLQYYGEGASVVRASIDGTEHFIALRQLPDSGGAVLAATSIARFEAAWRDEISLNVTLFAGVSAILMVVLYAYYIQAKRTRDADAVFAESNLRVETALSRGRCGLWDFDLDNRRLFWSRSMYEMLGMQGDASVLSFGDAARLMHVEDRGIYRVARAIAKGNERQIDQVFRMRHADGHYVWLRARAQVIRTVSGRTHLIGIAMDVTEQHRLAQRYAEADQRLADAIECTSEAFVLWDKHDRLVMCNTHYQQAWQLPDHVLVPGTERTIVHAAAARPVVERRIADPDRSNHSQTSEVQLADERWLQINERRTRDGGLVSVGTDITLLKRHQVRLRESERRLMATIGDLSASRVTLEQQKAELSIANANYQAEKERAEAANRAKSEFLANMSHELRTPLNAILGFSEILQDQMFGPLGSEKYHEYSRDIFESGKHLLNVINDILDMSKIEAGHMRITRERIDLAPLIEETLRFTTIPAERKNIRVVQQISSGLTMFADRRAMKQVLLNLLSNAVKFTNEGGRISLRARKVRGAVTLTIADSGIGIPKGALQKIGQPFEQVQSQYAKSKGGSGLGLAISRSLTRLHGGTMKIHSAENVGTIISVRIPDRG
>NZ_CP019485.1|WP_095920168.1|1075534_1078495_+|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MAEAIERSLSDIDVVAIRPASQADAKAALSVLKDAAKGSDHIAKLIASDAPLKDFLVAAFALSPFLRDTARSHPAILEALLSETLPAFLKRRIEAARVAWRGDAAGAALPDAEIMTRLRRAKREVAFAVALADLSRLFGGRETTGWLSDFAEAAVSAAIDHLLLGAHESGKFVLKDSSAPSTASGVVVLGMGKLGAGELNYSSDIDLVVFYDPQSSIITNRDDAPETFARLLRRLIRILQERTGDGYVFRTDLRLRPDPGSTPLAIPVEAAMLYYESRGQNWERAAFIKARPIAGDLEAGERFLKELTPFVFRKYLDYAAIADIHSIKRQIHAHKGHGEIAVKGHNIKLGRGGIREIEFFVQTQQLIAGGRTPALRLRQTETMLRMLAESGWIDGATAEELIEAYWFLRDVEHRIQMVHDEQTHLLPETEPELRRIAYMLGFEDTASFSNALSRVLRTVERRYAQLFEQEAKLSTETGNLVFTGQQDDPDTLETLKKLGFQRPSDIANIIRTWHYGRYRATQSVEARERLTELTPELLRVFGESRRADEAFLRFDHFLSGLPAGIQLFSLLGNNPGLLSLIVNIMSSAPRLADIIAAKPHVFDGMLEPGLLAELPTRDYLAPRIATFVGGGRHYEEVLDRLRIIAAEQRFLIGIRLLTGAITGLQAGRALTDLADLIIAAALDAVLEEVRSAHGRFPGGRVAIVGMGKLGSHELTAGSDIDLILLYDYDDEVLESDGAKPLDPVRYFTRVTQRLIAALSAPTAEGILYDVDMRLRPSGNKGPVATRITAFVKYQRTEAWTWEHLALTRARCICGDESLVGEAEAIFAEILTEKRDIAKIRKDVEEMRGLIDKEKPPKDIWDFKLIPGGLVDIEFIAQYLALVAPARGVTSPPAGTHTLEALKALGAGMMNANDLDTAAEALVLFTELSQLVRLCIDGDFDPKEAPAGLVDLVCRAGDYPDLTHLEADIRRLSKAVRRIFQGVVAAA
>NZ_CP019485.1|WP_010968992.1|1074102_1075500_+|HAMP-domain-containing-histidine-kinase
MSRISVLFRTTAVRLSALYLVLFSLCAAFLVFYVTGMSERLLQQQTRDSIAAEVTQIADVYDRAGINGLLRSLERRARQPGANLYVIAGPNGEILAGNVAALQPGLLDDEGWKSEPFRYRRFTDESRAERHVALAQVLVLDNGLRILVGRDLQEPEKFRVLVRQALMVALGIMGLGALVIWFGIGRNALRRIDRMSEASTKIMAGDLSQRLPTSGSGDEFDRLSESLNAMLERIEKLNEGLKQVSDNIAHDLKTPLTRLRNKAEAALADTEGSNQSGALEQIIAESDQLIRTFNALLMISRVEAGSAVAEMSEVDLARIVADCVELYEPLAEDKEMRIEAEAAPGVAISGNRELISQALGNLIDNAIKYAEGAENPLIRVEMMRSDRHVVLTVADHGPGIPENMRGEVVKRFVRLDESRSKPGTGLGLSLVDAVMEMHRGSLELSATEEDGRGLAVRMVFPAVAT
>NZ_CP019485.1|WP_010969000.1|1091921_1092920_+|ABC-transporter-substrate-binding-protein
MKKLLATTCLAAGLLGLGSAASAAECGDVTIANMNWQSAEVLASVDKFILTEGYGCSAELVVGDTVPTITSMIEKGEPDIAPEGWVDLLPDVVNRGLQEGKLVGAAVALSDGAVQGWWVPKYIVDANPDIKTIDDVLKHKELFPDPEDPSKGAIFNGPQGWGGTVVTTQLYKAYGAEAAGFTLVDTGSAAGLDGSIAKAYERKQGWAGYYWAPTALLGKYEMVKLEHGVPNDMAEWKRCNTVADCPDPKKNDWPKDKVQTLVTKEFADRAGPAMEYLNTRAWTNDTVNKLMAWMTDNQASGEEGAKHFLEENPDLWTKWVSPEVAEKIKAAL
>NZ_CP019485.1|WP_003527334.1|1093140_1094028_+|proline/glycine-betaine-ABC-transporter-permease
MEWLTKFPHMDDDRLRQLKKIIDEGFRSFTRAYGDAIESFFDPLQFFLIHAERFMTRTPWPIILILIAVIAWFASRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVVMLLGIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRVSQAYGRRLQRHREIIHG
>NZ_CP019485.1|WP_010969001.1|1094117_1095131_-|zinc-binding-alcohol-dehydrogenase-family-protein
MRAVAYKTPQPIANETALIDVDLPVPTPGERDLLVEVRAVSVNPVDTKVRAGVQPEPEQLKVLGWDAAGVVKAVGPKVTLFKPGDEVFYAGAIDRPGTNAELHLVDERIVGRKPQSLDFAAASALPLTAITAWETIFDRLRVNDPVPGAANAVLIIGGAGGVGSIAIQLLRALTNVTVIATASRAETREWALKLGAHHVLDHSRPLAAEIEQLALGAPAFVFSTTNTDKHVDEIVKLIAPQGRFALIDDLAVLDVTPFKRKSVSIHWEMMFARPLFGTPDMIEQHNLLNRVAELVDGGKIRTTLTETLGPIDAATLRKAHQMIETGRTRGKLVLAGF
>NZ_CP019485.1|WP_010969002.1|1095231_1095633_+|helix-turn-helix-transcriptional-regulator
MSRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGVLRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTVFPVVPPRVDYALTARGESLKPVIMALKAWGDENVLCDGDSMTLKPLESRSRPELKGA
>NZ_CP019485.1|WP_010969003.1|1095771_1096698_+|diacylglycerol-kinase-family-lipid-kinase
MKVKAIFNRDGGTFRTTDMDAYSRKVEEDFRAAGHEIEIAVVGADEMRDTLETACGRGDLDAIVAGGGDGTISAAAGVAWKTGMPLGIVPAGTMNLVARSLKLPLDIWKVPEVLANGRIIDADIGSADGRAFVHQFSMGLHARMVRYRQSYRFASRLGKISASTRAAIGVIFNPPDFEIEFDADGHRERRHVSAISVSNNHFGHDTLMYAEDLTSGHLGFYTAPPLSPAGVAKLSFDILRGKFRSSTLITEMSALTVDLHFPKMDRKINCVIDGELVPIRSGRVALRVHPGELKLLVGSQESNAGKTV
>NZ_CP019485.1|WP_095919948.1|1096713_1098201_-|glycosyltransferase-family-39-protein
MLEAVNRRPGAAVLAVAGYFLLCIILRVSVSSSLEIDEAEQAFLSQFLALGYGPQPPFYNWLQYGLAELIGPSLATMTILKNGLLFLCCLFYGLAARLVLADRRLPPIAMLGVLTLPPVFLLAQRDLSHTIAALFAVSLFLYGFLRTLKRPSLFSYLLTGVAVGIGLMAKYNFVLVPVAAIVAVLPERELRARILDWRILPAIAIATLIVLPHAYWMLQNFGFASGGTLNEMREREAEGLLLQAFYGVYSLGSAIIGGSLGPLLVFGLVFRGKLRAIWQAESQWSRIIGRMLALCLIAVLLVVLGVAATHVREKWLVLFLVLIPLYLCLKIEAANIDLTDSLRRFFLLVCVIALGALVMVSARAVVRPWFGHYSRLNIPYAAFAEAVAQAEGGQPALILANDKQIAGNLRTQFSRAQVTMPRPSNALPVDMSRRPLLLVWHDDAQPEAPVPDLLRNALSELGVPGAAAAPRHLALPYLYGTGADRYGFSYIWVAE
>NZ_CP019485.1|WP_010969005.1|1098193_1099213_-|glycosyltransferase-family-2-protein
MNRIEEPVKPMTEVLEGVELSIVVPVFNEEESVGPLVTRIRAAMAGFLKSWELILVDDGSTDRTLPNARKELSNPDLQLKIIELQKNFGQTAAMQAGIDAASGRLIATLDGDLQNDPADIPNMVAAIEERGLDLLVGWRQNRRDALILRKIPSWCANVLIGKITGVRLHDYGCSLKIYRGSIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMPVTHHARHYGTSKYGISRTFRVILDLLAVLFFMRYKARPGHFFGSIGLAAGGLSVLILLYLAIDKFILGNDIGTRPMLIVGVMLFLSSIQLITTGILSEMMARAYFRDDEVTSYIVRQTFEREQPHA
>NZ_CP019485.1|WP_003527322.1|1099308_1100265_+|flippase-like-domain-containing-protein
MNTNWERSRRSWLARNRLALISAAAIAAYAIFVEWVWGWPVLLRQWAEIGVGPVLSALALLVATYFIRCYRIHDYFPGETRGRFLSLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGVPLVRGTAALFVMRLLDLHALLTVAAVGLVAGRGQGAIGWVLWLIAFLSPLAFFLMKEKALTVMRRVAPAKAGPLLDEAEAGLPIGIPAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAASFGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGASADQATLETLGRASVNAHLMVIVSAVAGTMLSLLLRPKA
>NZ_CP019485.1|WP_003527321.1|1100293_1101796_-|AMP-nucleosidase
MNKRISSNSVLSVATPEPFEPQLFDDPTEAVDCLEALYERNTRFLCEGFEGLGKSGRPLTRFRACYPQVSIETSSFGHVDSRLSFGYVSAPGVYTTTITRPKLFRHYLKEQLGHLMRNHGVGVTVSESSTPIPLHFAFGEGAHVEASAAESIDIPLRDLFDAPDLTTTDDEIANGSYEPGPGEPSPLAPFTAQRIDYSLARLSHYTATSARHFQNFVLFTNYQFYVDEFCAWARQQMAEGGNGYTAFIEPGNITTPAGADRPDADYSLARLPQMPAYHLKKKGHGGITLVNIGVGPSNAKTITDHIAVLRPHVWLMLGHCAGLRNSQRLGDYVLAHAYMREDHVLDDDLPVWIPLPALAEVQVALQDAVAEVTGYKGYDLKQIMRTGTVATIDNRNWELRDQRGPVKRLSQARAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMASAFYRTQVSQHLKIGILALQKLAAMPPEKLHSRKLRSFYETSFQ
>NZ_CP019485.1|WP_003527320.1|1101875_1102196_-|YnfA-family-protein
MPAYAIYFLAALAEITGCFAFWSWLRLGKSALWLIPGMASLALFAWLLTMVDAAAAGRTYAAYGGVYIVASLSWLWLAEGVRPDHWDMTGAAVALAGSAIILAGPR

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Crispr_ID: NZ_CP019485_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019485_3

1967264-1967376

Orphan

Consensus_repeat	Method
CCCTCATTCCTGTGCTTGTCACAGGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019485_3

>merge|NZ_CP019485|3|1967264-1967376|CRISPRCasFinder
CCCTCATTCCTGTGCTTGTCACAGGAATGAGGCAGAGAGGGTACGGTCCTTCGGAATACTTCTCGCAGGCCGTGCATCCCCGCCTCCCTCATTCCTGTGCTCGTCACAGGAAT

>NZ_CP019485|3|3|1967264-1967376|CRISPRCasFinder
CCCTCATTCCTGTGCTTGTCACAGGAAT	GAGGCAGAGAGGGTACGGTCCTTCGGAATACTTCTCGCAGGCCGTGCATCCCCGCCT
CCCTCATTCCTGTGCTCGTCACAGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019485.1\|WP_095920034.1\|1961404_1962427_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380530
NZ_CP019485.1\|WP_010969520.1\|1976289_1976973_+\|phosphoglycolate-phosphatase	unknown	unknown	gnl\|CDD\|237310
NZ_CP019485.1\|WP_003535076.1\|1975374_1976070_-\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP019485.1\|WP_010969518.1\|1970987_1971383_-\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP019485.1\|WP_013844510.1\|1968188_1969922_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227002
NZ_CP019485.1\|WP_010969512.1\|1962437_1963265_-\|TolB-family-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP019485.1\|WP_003535074.1\|1974720_1975263_-\|DUF2059-domain-containing-protein	unknown	unknown	gnl\|CDD\|225725
NZ_CP019485.1\|WP_010969517.1\|1970063_1970966_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019485.1\|WP_010969515.1\|1967764_1968187_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP019485.1\|WP_010969508.1\|1957939_1958623_-\|5,6-dimethylbenzimidazole-synthase	unknown	unknown	gnl\|CDD\|380321
NZ_CP019485.1\|WP_095920032.1\|1960113_1961307_-\|phytanoyl-CoA-dioxygenase	unknown	unknown	gnl\|CDD\|227609
NZ_CP019485.1\|WP_003535070.1\|1971518_1972892_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP019485.1\|WP_010969519.1\|1973124_1974516_-\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|213618
NZ_CP019485.1\|WP_095920036.1\|1977005_1978901_-\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225536
NZ_CP019485.1\|WP_003534093.1\|1965218_1967138_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP019485.1\|WP_010969513.1\|1963267_1964950_-\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP019485.1\|WP_010969509.1\|1958920_1959742_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180462
NZ_CP019485.1\|WP_003534106.1\|1955976_1956621_+\|autoinducer-synthase	unknown	unknown	gnl\|CDD\|226430
NZ_CP019485.1\|WP_010969507.1\|1956788_1957916_+\|DUF2865-domain-containing-protein	unknown	unknown	gnl\|CDD\|371363
NZ_CP019485.1\|WP_003534108.1\|1955082_1955820_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777

Protein	Function_ID	Function_description	E-value
NZ_CP019485.1\|WP_095920034.1\|1961404_1962427_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380530	cd06307, PBP1_sugar_binding, periplasmic sugar-binding domain of uncharacterized transport systems. Periplasmic sugar-binding domain of uncharacterized transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes.	2.0178e-87
NZ_CP019485.1\|WP_010969520.1\|1976289_1976973_+\|phosphoglycolate-phosphatase	gnl\|CDD\|237310	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP.	2.43772e-103
NZ_CP019485.1\|WP_003535076.1\|1975374_1976070_-\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	8.21528e-117
NZ_CP019485.1\|WP_010969518.1\|1970987_1971383_-\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	6.93053e-44
NZ_CP019485.1\|WP_013844510.1\|1968188_1969922_+\|hypothetical-protein	gnl\|CDD\|227002	COG4655, COG4655, Predicted membrane protein [Function unknown].	0
NZ_CP019485.1\|WP_010969512.1\|1962437_1963265_-\|TolB-family-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	1.73907e-62
NZ_CP019485.1\|WP_003535074.1\|1974720_1975263_-\|DUF2059-domain-containing-protein	gnl\|CDD\|225725	COG3184, COG3184, Uncharacterized protein conserved in bacteria [Function unknown].	3.19008e-64
NZ_CP019485.1\|WP_010969515.1\|1967764_1968187_+\|pilus-assembly-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	2.76293e-23
NZ_CP019485.1\|WP_010969508.1\|1957939_1958623_-\|5,6-dimethylbenzimidazole-synthase	gnl\|CDD\|380321	cd02145, BluB, 5,6-dimethylbenzimidazole synthase. BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.	4.8092e-111
NZ_CP019485.1\|WP_095920032.1\|1960113_1961307_-\|phytanoyl-CoA-dioxygenase	gnl\|CDD\|227609	COG5285, COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism].	5.00091e-103
NZ_CP019485.1\|WP_003535070.1\|1971518_1972892_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP019485.1\|WP_010969519.1\|1973124_1974516_-\|glutathione-disulfide-reductase	gnl\|CDD\|213618	TIGR01424, Glutathione_reductase_cytosolic, glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria. [Energy metabolism, Electron transport].	0
NZ_CP019485.1\|WP_095920036.1\|1977005_1978901_-\|murein-L,D-transpeptidase	gnl\|CDD\|225536	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP019485.1\|WP_003534093.1\|1965218_1967138_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	7.21123e-140
NZ_CP019485.1\|WP_010969513.1\|1963267_1964950_-\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NZ_CP019485.1\|WP_010969509.1\|1958920_1959742_-\|SDR-family-oxidoreductase	gnl\|CDD\|180462	PRK06198, PRK06198, short chain dehydrogenase; Provisional.	7.66456e-165
NZ_CP019485.1\|WP_003534106.1\|1955976_1956621_+\|autoinducer-synthase	gnl\|CDD\|226430	COG3916, LasI, N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.55042e-97
NZ_CP019485.1\|WP_010969507.1\|1956788_1957916_+\|DUF2865-domain-containing-protein	gnl\|CDD\|371363	pfam11064, DUF2865, Protein of unknown function (DUF2865). This bacterial family of proteins has no known function.	1.36883e-30
NZ_CP019485.1\|WP_003534108.1\|1955082_1955820_+\|transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	3.50703e-21

>NZ_CP019485.1|WP_003534093.1|1965218_1967138_+|LTA-synthase-family-protein
MARIDSAVSSSQVYADGESSSARYTRTLSGARSALFTLLIAIALVFTVEVIVRWSWPDTVAYFADPMRPAWTTVAVFFLAMLGVDALFGREHKAALLIAPLAVVPAFISQQKQVFLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGLIAAIVVGALLLRFAWQNFPKLTRRERLMRIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAINLPMANVNAPAGYMADAIDRIPVKPLPAGTTHRGKPDVIVLMSESFWDPTRLPKVKLTPDPMPTIRELQGGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRNPIPSLATFFRGEGYVSRAIHPFQGWFWNRTAVYKAFGFDMFRSEENMPAMQKRGIFASDESLTKEIIRQADEVEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGDLPEADRQVLATYAQGVKEADDSLKMLMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWSNKTGPKKNIGTISPAFLSYQILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVADWLRQPKVPASLRDYRFLQHDMMFGKRYSTERFFKSHAELYSAGL
>NZ_CP019485.1|WP_010969513.1|1963267_1964950_-|NAD+-synthase
MTAQKAAPSTLRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAFLKACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGEFDEKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKVDVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAVSEWKRGAGGWISANGLKSRIPEGEEADYRACMLGFRDYVNKNGFRNVVLGLSGGIDSAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYDIVAIEEPVEGFLSALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDSLPPYPVLDDILECLVEKEMSTEEIVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRKNFGRDRRYPITNRFRDRG
>NZ_CP019485.1|WP_010969512.1|1962437_1963265_-|TolB-family-protein
MRSSVEIFDIATGETRVVWQTERLVEAPNWSPDGKFLIINGDGRLYRLGFDGSDPTEIDTGFARHCNNDHGISPDGSTLVISDKTEFGSSAIYLLPAEGGTPRLVTRNLPSYWHGWSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRMQIWRVRPDGKDVQRITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPDGGNARVLLELFGGQGTVNVPNWSPSGTAFAFVRYEPEE
>NZ_CP019485.1|WP_095920034.1|1961404_1962427_+|LacI-family-transcriptional-regulator
MAHPFLVKDIAFQAGLSTATVDRVLNGRRGVRQQTVMRVNAAIRELERQQAGLEVQGRKYAVDVVMEAPERFTEAVRKAFESEAATFMPTVFRSRFHFAETMRPQDISQLLDRIRLRGTDGVVLKAPDVPEIAAAVARLENAGVAVVTLVTDLPHSSRTAYAGADNRAAGETAAYLIGERFADRPATVLVTISSSRFRGEEEREIGFRRVLREKYPHIGVVEISEGHGRNEETGALALKAIASHPEINAAYPIGGGNRAVLDAFGQLQRGCVLFVAHDLDEDNLDLLRQGLVQFVLHHDLKTDVRMAFHAVLERRGALRASEKRHLSAVEVITPYNLPRI
>NZ_CP019485.1|WP_095920032.1|1960113_1961307_-|phytanoyl-CoA-dioxygenase
MKTDNPARARLERVWLNEAACDIEEFRAAVEHRVSLADYPHAADCQKNILIYDSARLAGDCATQDGRRSVLAEICEALATGPGVAVFKRAFTDTRVIDEASGIFNEIIEEQHRTNSGGGDHFAKPGANDRIWNSLEKHCLKNPENFAAYYGNAIIALVSEAWLGPNYQMTAQVNRVNPGGASQSPHRDYHLGFQTSAVIEQYPAHVHRLSPVLTLQGAVAHCDMPVESGPTLFLPYSQTYLPGYLALKRPEFRTYFEENHVQLPLEKGDVVFFNPALFHAAGSNRSAGIKRVANLLQVSSAFGRAMETVDREHMCVVLFPAPKVLAAGGKLTQDEIANAVAACAEGYSFPTNLDRDPPVGGLAPRTQAQLMHEALAGEWSVEAFAEALADQAAKKLS
>NZ_CP019485.1|WP_010969509.1|1958920_1959742_-|SDR-family-oxidoreductase
MSTDHARLDGKIAIVTGGTQGLGATIAALFAERGAAGVVICGRNAAKGEAKAAEIAAATGSKVVYVPADLERVEDARAVAAACDRAFGRVDALVNAAAITDRGTILDTSPELFDRMFAVNVRAPFFLMQEVIKVMRREKTEGTIVNIGSMSAKAGQPFIAAYCASKGALETLTKNTAYAVLRNRIRVNGLNIGWMASEGEDRIQREYHDAPANWLEKAAASQPFGRLVDPAEVARACAYLSSAESGLMTGSVICFDQSIWGAYDASPHPEAPL
>NZ_CP019485.1|WP_010969508.1|1957939_1958623_-|5,6-dimethylbenzimidazole-synthase
MLPDPNGCLTAAGAFSSDERAAVYRAIETRRDVRDEFLPEPLSEELIARLLGAAHQAPSVGFMQPWNFVLVRQDETREKVWQAFQRANDEAAEMFSGERQAKYRSLKLEGIRKAPLSICVTCDRTRGGAVVLGRTHNPQMDLYSTVCAVQNLWLAARAEGVGVGWVSIFHESEIKAILGIPDHVEIVAWLCLGFVDRLYQEPELAAKGWRQRLPLEDLVFEEGWGVR
>NZ_CP019485.1|WP_010969507.1|1956788_1957916_+|DUF2865-domain-containing-protein
MSASPKVASKIRRIAAVLVPLALAAAGPAAASGVCERLSARLAGLPTGFTTNASLRDFTGAVSRQNIELRRAKNDRRRMECSSDSVVVIGGDDEAACAELDDTIARMEASLRQLKAQRRHLIGGGDDDVRRRILAAMELNGCSGAPREGWDAGSAEGQFASAADGTEVHRNILRDLPPDSGAYPLLLDAPRAELPLTDDDFAGSLRTMCVRTCDGAFFPISSHATPADFGRDADLCRARCPGAETELYYHVLATEEADQMVSATTGRPYTDLPTAFAYRARSVGSPGICGCGIPDPATDANGQKAVSAGKLTVVSPSVITIGSEKKAPAKPIAERPYDPAKNKVRVVGPTFLPQEESAIDLKHPLGPRYQPLQEN
>NZ_CP019485.1|WP_003534106.1|1955976_1956621_+|autoinducer-synthase
MIRIVNGNGRSQHPQAIDEMFRLRKRVFHDFLKWDVKTEGDWEIDHYDKANPLYVMSYSPDTGKIRGSLRLLPTLGPNMLDDTFPILLGDNPEIRSASVWESSRFCIDPEISQDRASNQVTIAAAELMCGVGEMSLASGISHIVTVTDVFLERMFRRMGCPGERIADPHRIGSVHAVAIAWEVSRNLLETMKAVASIEGTVLDRPMSLETARAA
>NZ_CP019485.1|WP_003534108.1|1955082_1955820_+|transcriptional-regulator
MANQQAVLNLLDIVEYGGCADPERFFALMRRTFNISHLLYLEAESLPDGLRICRLHHTFGAYAAEIYAARGLYRIDPILKLALGGVRPVEWATARRRFPECEPLFEAAEEIGLSTEGVALPLPSPAGRMALLAIGANMSPVEWSAYRRCHLRDFQLAANLFHASMLEHSAMAGALDERDLRLTGRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAHAVRHALIPTI
>NZ_CP019485.1|WP_010969515.1|1967764_1968187_+|pilus-assembly-protein
MSVFNRLLASRKGAAAIEFAIIAPLFFMCVLTLIAYGIYLSAAHSIQQVAADAARTAIAGLSLEERERLATDYIRRTTMNQTFIDSSRMNVTVRDDANNTNQFTVTISYDASDLPIWKLFTFALPGEQIERYATIRVGGI
>NZ_CP019485.1|WP_013844510.1|1968188_1969922_+|hypothetical-protein
MHGATTAFRRCLKSRTGNIGVSAALVMPLVVASMGLGIDYGYLTLQRRELQSVADLASIAAAADVSSAEEAVLAHFRSNDLGFAVSTPSGLMTVDGKLLPNDVETAAKGVATIVRGRYVPDPAIDAGQRFIRGALPADAVQVTLEKKGDIYLAALFSEPPDLSVIGTAASSKIAAFSVGSRLASLNGGLLNAILGQMLGTNIALKVMDYEALIDADIDIQPFLKIIATRLSLTAASYEDVLTAELTVPQLLGSLRLVQGLSGTVTSALKTVELATAGNKQTLTLAQILNIDPKKSLGVDAGSDWAMKVSALQIVSAAAVIANGEHQIALDAVAGLPGIASVKVRLAIGEPPLETPSHRLGSPGAAVRTAQTRLAVEVVIDGLAALAGTRIRLPIYVELAHAEAKLSDIRCYGGTPENAAVIIDAVPGVAEIALGDVDPTVLSSFSSDARVTRARLLDGLIKIDGIAHVESKNLQPSRLAFSPAEVSSRTIKSVSTRDILSSTTRTLLGNLDAQINVGGLLSIGSPTLLQQALAQTLGAVTAPVDQLLYNLLLLVGVRVGEADVRVTGVKCQRPVLVQ
>NZ_CP019485.1|WP_010969517.1|1970063_1970966_+|hypothetical-protein
MQRVAEKGSSEQQVPTGLTVGDLVRNPNFPQILQAGARTLIALNDLFPRVARLVASHQKWMLTQAAYSLHLERDVNNPESGITAARLLKFMRDTGGASRNTAAAFLAELVAYKMLQPASGGRTKRARPLEPTEVSETAMRLWFKSQMSTIDLLDGGTRVERVEADKSIFERAQPLAARRLLSDSRWTTPPKGVAIFVWSESGGVILDDLMTRVSEFAPMDGKVWVEVSLAKLAEHYLISNTHVRRIFARADAAGFLGKSEDGRRGRFWLSARLIEEYVSWQAVKIEALASAYDQASDWAA
>NZ_CP019485.1|WP_010969518.1|1970987_1971383_-|GFA-family-protein
MEINEGGCLCGAVRFKTRGKLRELIFCHCSQCRKQTGLYYAATNVLDREMEVEGVENVTWYRSSNEARRGFCRYCGSALFWKADGLDYTSILAGTFDGSVALEPGYHIFCADKGHYYDISDDLPRFAGSRP
>NZ_CP019485.1|WP_003535070.1|1971518_1972892_-|3-deoxy-7-phosphoheptulonate-synthase-class-II
MAQTWTPNSWRQKPIQQVPDYPDLAVLDSVEARLAKYPPLVFAGEARRLKSALANVAEGRGFLLQGGDCAESFAEHGADTIRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSGVEKQGDVTLPSYRGDIINGIEFTEEARVPNPERQVMAYRQSAATLNLLRAFAMGGYANLENVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADGLLELIDILNPANEAGRLTLICRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITLNNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGNDVTECTGGARALSGDDLADRYHTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG
>NZ_CP019485.1|WP_010969519.1|1973124_1974516_-|glutathione-disulfide-reductase
MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGEIVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMYQPSYRVRNGERVG
>NZ_CP019485.1|WP_003535074.1|1974720_1975263_-|DUF2059-domain-containing-protein
MNKFAGLARTFATAAILVSVSVPAVRAQDVTEDQIKAARATIAALGVTNSFDNILPNLAERLKNTLIQASPNHQELITATVDEKALSLAGRRSDLEREAATIYAKTFTVEELNAIADFYNSTAGKKLLNDGPIASREMLKAADIWAAGVSRDLTSEATKSLDEKIGNAPAANAGAAAPAQ
>NZ_CP019485.1|WP_003535076.1|1975374_1976070_-|ribose-5-phosphate-isomerase-RpiA
MDARQMKIKAAEAALEHVESGMRLGIGTGSTAEEFVRLLAEKVASGFQISGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIADESKVVDVLGAFKLPIEINPFGQVATRLAIEKTASRLGLAGEIVVRSSGDGVFMTDGGHLILDASFGRIPDADALAVELNAIPGVVEHGLFIDVASMAIIAGPEGARTLTAS
>NZ_CP019485.1|WP_010969520.1|1976289_1976973_+|phosphoglycolate-phosphatase
MSLPLVVFDLDGTLVDTAPDLVASLNHAVTQAGIEPVTYADLTHLVGHGARAMIERTFALRGRTIAEEELTWQMKEFVDFYHGSMPGESLPYPGLIEALDRLQDAGLKLAVCTNKPEMLAKRLLEGLGLLGRFAAISGGDTFTVRKPHADHLLSTVSNAGGMAERAVMVGDSLNDVLVARNASVPSIVVPFGYSDVPIESLLPDRIIGHFDELTPDLVETVLSRKPK
>NZ_CP019485.1|WP_095920036.1|1977005_1978901_-|murein-L,D-transpeptidase
MRIIKSAAIVTLMSGCVVATMDVQPASAITFMDFIRGGKKRDVQEQVQPRRQLPGVDMFAPQRLDQKAAKPPRITGPRYYTYKAEPLRRIATDRLVDPVVTGSVLNGALPPMLRSPLADARQFLPEVDVRAPAEVAKAVENFYGTRTDFLWIEGTGVSGRAKAALGVLSDAAKVGLDPLDYAVIVPPEDFDRGDMIAREKALVRFEIAMSAAVLTYVQDTVRGRIDPNRISGYHDFKRKNVDLLGFLEKIETSSDVAALVESQNPKSAQFTALRQELERLRTQVEAAPRVEIAPGTLLKPGESNPELANVIAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADGIVGQASIRALTGGDTTQGKIDKVEIAMEQARWLPDGLGDRYVFINQPAFTASYTEQGTEQFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQVEVGGRVVPSTAVNWYGSTNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQRALSHGCVRLADPRRMAAAVLGVSVDEVGMEISGGRNKALPVSAKVPVYVSYFTAWPNKDGTVEYFDDVYERDMYMNRAFEATRKARSLEG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019485_1	1.2\|173879\|16\|NZ_CP019485\|CRISPRCasFinder	173879-173894	16	NZ_CP019485.1	531252-531267	1	0.938
NZ_CP019485_1	1.2\|173879\|16\|NZ_CP019485\|CRISPRCasFinder	173879-173894	16	NZ_CP019485.1	2383574-2383589	1	0.938

1. spacer 1.2|173879|16|NZ_CP019485|CRISPRCasFinder matches to position: 531252-531267, mismatch: 1, identity: 0.938

tagggtgaggggcggt	CRISPR spacer
tagggtgaggggcagt	Protospacer
*************.**

2. spacer 1.2|173879|16|NZ_CP019485|CRISPRCasFinder matches to position: 2383574-2383589, mismatch: 1, identity: 0.938

tagggtgaggggcggt	CRISPR spacer
tagggtgaggggcagt	Protospacer
*************.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1606753 : 1618002

uncultured_Mediterranean_phage(80.0%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969277.1\|1606753_1607788_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	2.0e-22	42.6
WP_086017693.1\|1607881_1608700_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.7e-32	34.7
WP_010969279.1\|1608692_1609412_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.8e-40	45.2
WP_010969280.1\|1609476_1610586_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-29	37.6
WP_003534564.1\|1610680_1610887_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	8.2e-08	65.9
WP_010969282.1\|1610960_1611608_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_003534569.1\|1611604_1612447_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.7e-43	41.2
WP_003534571.1\|1612583_1613867_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.0e-101	47.0
WP_010969283.1\|1613894_1614665_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-22	30.9
WP_014526709.1\|1614661_1615315_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.6e-15	34.6
WP_010969285.1\|1615486_1616140_+	biotin transport regulator	NA	NA	NA	NA
WP_010969286.1\|1616463_1618002_+	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	1.0e-14	32.8

DBSCAN-SWA_2

2459650 : 2469285

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003532953.1\|2459650_2461705_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-35	33.6
WP_107010522.1\|2461793_2461919_-	hypothetical protein	NA	NA	NA	NA
WP_095920090.1\|2462137_2463172_-	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	4.1e-15	68.6
WP_095920176.1\|2463195_2464383_-	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	5.4e-35	27.8
WP_010969854.1\|2464642_2466553_-	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.1e-74	35.7
WP_010969855.1\|2466598_2468602_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-87	41.5
WP_003532937.1\|2468835_2469285_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.0e-15	38.4

DBSCAN-SWA_3

2501046 : 2550882

Klosneuvirus(16.67%)

holin,transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969874.1\|2501046_2501766_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003534512.1\|2501821_2502127_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_010969876.1\|2502357_2503461_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_003534506.1\|2503933_2504389_+	MaoC family dehydratase	NA	NA	NA	NA
WP_010969877.1\|2504385_2504856_+	MaoC family dehydratase	NA	NA	NA	NA
WP_003534501.1\|2504901_2505444_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.5e-35	45.5
WP_010969878.1\|2505618_2505804_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_010969879.1\|2505822_2507082_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A1B0V011	Roseobacter_phage	4.3e-51	42.1
WP_095920093.1\|2507078_2507711_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_003534495.1\|2507707_2508331_-	DUF1285 domain-containing protein	NA	NA	NA	NA
WP_010969882.1\|2508689_2509703_+	MoxR family ATPase	NA	NA	NA	NA
WP_010969883.1\|2509706_2510627_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_010969884.1\|2510623_2513437_+	DUF4159 domain-containing protein	NA	NA	NA	NA
WP_010969885.1\|2513447_2515517_+	membrane protein	NA	NA	NA	NA
WP_010969886.1\|2515531_2516083_-	N-acetyltransferase	NA	NA	NA	NA
WP_010969887.1\|2516340_2517333_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_010969888.1\|2517498_2517705_+	antitoxin VbhA family protein	NA	NA	NA	NA
WP_010969889.1\|2517767_2518676_+	cell filamentation protein	NA	NA	NA	NA
WP_010969890.1\|2518800_2519292_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003534453.1\|2519374_2520277_+	metallophosphoesterase	NA	NA	NA	NA
WP_010969891.1\|2520470_2520986_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_003534449.1\|2520989_2521817_+	anti-sigma factor	NA	NA	NA	NA
WP_003534446.1\|2521939_2522368_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_010969893.1\|2522364_2522616_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_010969894.1\|2522753_2524463_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_003534440.1\|2524563_2524701_-	hypothetical protein	NA	NA	NA	NA
WP_010969895.1\|2524934_2526086_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_003534438.1\|2526258_2526846_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.1e-28	37.3
WP_010969897.1\|2528885_2529797_-	aminoglycoside phosphotransferase APH(3')	Q75ZG1	Hepacivirus	8.6e-17	30.2
WP_010969898.1\|2529828_2530293_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-28	47.1
WP_010969899.1\|2530289_2531210_-	cation transporter	NA	NA	NA	NA
WP_010969900.1\|2531378_2533568_-	anthranilate synthase	NA	NA	NA	NA
WP_010969901.1\|2533841_2536073_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_014529145.1\|2536196_2537183_+	extensin family protein	NA	NA	NA	NA
WP_010969903.1\|2537343_2539023_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_010969904.1\|2539113_2540337_-	DUF2333 family protein	NA	NA	NA	NA
WP_010969905.1\|2540340_2541630_-	hypothetical protein	NA	NA	NA	NA
WP_003537933.1\|2541813_2542977_+\|transposase	IS4-like element ISRm16 family transposase	NA	NA	NA	NA
WP_010969906.1\|2543154_2543559_-	DUF559 domain-containing protein	NA	NA	NA	NA
WP_010969907.1\|2543671_2545588_-	ATP-binding protein	NA	NA	NA	NA
WP_010969908.1\|2545591_2546740_-	hypothetical protein	NA	NA	NA	NA
WP_003535848.1\|2546801_2547890_-	hypothetical protein	NA	NA	NA	NA
WP_010969910.1\|2548050_2548638_-	thymidine kinase	A0A0K2FHC3	Enterobacter_phage	4.1e-52	54.7
WP_010969911.1\|2548923_2549880_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013844756.1\|2550036_2550882_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019484

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019484_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019484_1

1225631-1225733

Orphan

Consensus_repeat	Method
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019484_1

>merge|NZ_CP019484|1|1225631-1225733|CRISPRCasFinder
TCGGCGGCGGCGGCGGTGCGGGCGGCACCTCCACCGCGTCCGGCAGCCAGGCGACGGCCAACATCACCGTCGGTGTCGGCGGCAGCGGCGGTGCGGGCGGCAA

>NZ_CP019484|1|1|1225631-1225733|CRISPRCasFinder
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CCTCCACCGCGTCCGGCAGCCAGGCGACGGCCAACATCACCGTCGGTG
TCGGCGGCAGCGGCGGTGCGGGCGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019484.1\|WP_014527142.1\|1212138_1213302_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP019484.1\|WP_014527143.1\|1211026_1212049_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP019484.1\|WP_010975842.1\|1238882_1239506_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP019484.1\|WP_014527141.1\|1213307_1215350_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP019484.1\|WP_080591487.1\|1232776_1233319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_010975822.1\|1207581_1208856_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP019484.1\|WP_014527138.1\|1220255_1221407_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019484.1\|WP_080591489.1\|1230975_1231902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_088194950.1\|1233659_1233848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_014527144.1\|1208852_1210310_+\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NZ_CP019484.1\|WP_074853281.1\|1221497_1221890_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_010975834.1\|1228712_1229630_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP019484.1\|WP_010975829.1\|1218998_1219397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_095926570.1\|1232070_1232574_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP019484.1\|WP_088194951.1\|1235685_1237911_-\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP019484.1\|WP_095919496.1\|1229709_1230951_+\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP019484.1\|WP_015243022.1\|1215534_1218873_+\|RTX-toxins-related-Ca2+-binding-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP019484.1\|WP_088194952.1\|1239705_1240596_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP019484.1\|WP_014527139.1\|1219485_1220268_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP019484.1\|WP_088195194.1\|1233823_1235605_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|179625

Protein	Function_ID	Function_description	E-value
NZ_CP019484.1\|WP_014527142.1\|1212138_1213302_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_014527143.1\|1211026_1212049_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_010975842.1\|1238882_1239506_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NZ_CP019484.1\|WP_014527141.1\|1213307_1215350_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_010975822.1\|1207581_1208856_+\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP019484.1\|WP_014527144.1\|1208852_1210310_+\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NZ_CP019484.1\|WP_014527138.1\|1220255_1221407_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	4.76279e-171
NZ_CP019484.1\|WP_010975834.1\|1228712_1229630_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP019484.1\|WP_095926570.1\|1232070_1232574_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.13064e-16
NZ_CP019484.1\|WP_088194951.1\|1235685_1237911_-\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_CP019484.1\|WP_095919496.1\|1229709_1230951_+\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	1.87845e-67
NZ_CP019484.1\|WP_015243022.1\|1215534_1218873_+\|RTX-toxins-related-Ca2+-binding-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.62449e-24
NZ_CP019484.1\|WP_088194952.1\|1239705_1240596_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.50422e-30
NZ_CP019484.1\|WP_014527139.1\|1219485_1220268_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.45864e-66
NZ_CP019484.1\|WP_088195194.1\|1233823_1235605_+\|potassium-transporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	1.80518e-170

>NZ_CP019484.1|WP_074853281.1|1221497_1221890_+|hypothetical-protein
MRGGRIINTYKESHIQRVAHSHVEHGGARFAAVCRCMSAIFRGDTSDEARHQNQESPAEVFAGSIRTRRPSCVSVRAEHVAFFDRAGRRARRGGPGRRGVCGLQWKCNPDDRPGRLWIHMVGLLGRQWCR
>NZ_CP019484.1|WP_014527138.1|1220255_1221407_-|sensor-histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACYA
>NZ_CP019484.1|WP_014527139.1|1219485_1220268_-|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGGKVLDDTATVLPVVMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP019484.1|WP_010975829.1|1218998_1219397_+|hypothetical-protein
MKRPTNRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP019484.1|WP_015243022.1|1215534_1218873_+|RTX-toxins-related-Ca2+-binding-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP019484.1|WP_014527141.1|1213307_1215350_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP019484.1|WP_014527142.1|1212138_1213302_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP019484.1|WP_014527143.1|1211026_1212049_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFKKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP019484.1|WP_014527144.1|1208852_1210310_+|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP019484.1|WP_010975822.1|1207581_1208856_+|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NZ_CP019484.1|WP_010975834.1|1228712_1229630_+|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP019484.1|WP_095919496.1|1229709_1230951_+|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRRPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP019484.1|WP_080591489.1|1230975_1231902_+|hypothetical-protein
MQRWRRRPPLWQSITTIIPFRAPSQQRPPVRQEGQHPVPQVPRAPLPRRAPPALRSQHHLHRPRQCPLCLVPPGRPQRQWHPSSRLRRRRLPCRPRGRSFRRLRRPLPCRYREMTEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP019484.1|WP_095926570.1|1232070_1232574_+|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP019484.1|WP_080591487.1|1232776_1233319_+|hypothetical-protein
MVHPAKICLGTHDRVVQILLPSEHLVVIEIAPVEQIKGDAFEAAIPSFRRSARPSVRVVCQQSAPKRVAVVVESDYAVGHENMVTGEAFAGDDALGIKSGKGCLAQKHTGENGIRAISEEDAVRQSPAPHRVLFYAGLQRVQGRCTIKTESATISVVDDHCRVNQMIKCLRKEQNQLDVP
>NZ_CP019484.1|WP_088194950.1|1233659_1233848_+|hypothetical-protein
MGLIAMSERDLQRIEVLSQVIELDSKQVEWKDVRASTVAGAALRGARHLEIRSETWLLSPTA
>NZ_CP019484.1|WP_088195194.1|1233823_1235605_+|potassium-transporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCAILLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGGIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERKIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NZ_CP019484.1|WP_088194951.1|1235685_1237911_-|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTTAIGKSLSRIDGRLKVTGQATYAAEFNQEGQAHAVIVGSTVGLGRIESIDSAAVEKMPGVVAVISHLNAQRLAYNEHRGPIDPPAGERLHVLQGSEVRFFGEPVAIVVAETLDQAEHAANALKVTYSARPPQVDAHAGEQVVPAVARRPGARAEADVARGDADKALETAAVKVEAEYVIARENHNPMEPHATIAAWNGDRLTLWSKSQFVVNEQAEIAAIFGLPPGNVQVNCPFIGGAFGTSLRTWPHVTLAALAARHVNRPVKLVLTRKQMFFATGHRPYTLQRIALGAQPDGKLIGIVHEGAGETSRYEEFMEALTSVTSFMYSCPNVRTSYRLIPLDASTPTYMRGPGEASGIHALECAVDELAYKLRMDPIDLRRINEPQIDEGRQVPFSSRSMLKCYDLGAERFGWSRRTPEPGSMRDGRLLIGYGMANASYPCLFAPANARVRLLPDGTVEVEAAASDMGPGTYTSMSQVAAEYLGIPLERIRFSLGRSDFPATPPHGGSMTMASVGSAIRAACLDLQAKAAVLAAKGGGNAGLAGQSPEALEWRDGMLFVKGRSDRGVTYADLVSNGGESPLVGEGTAARDAETGQKYSMHSFGAVFAEVAIDPDVKTIKVRRALGAYGVGRVVNPKLATSQCIGGMIGGIGMAIMERTVLDRRNGRPINAHMADYLVPVNLDTPHIEAHFVDEEDTIVNPLGVKGLGEIALVGMSAAVSNAIHHATGRRVHELPIMIESLL
>NZ_CP019484.1|WP_010975842.1|1238882_1239506_-|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NZ_CP019484.1|WP_088194952.1|1239705_1240596_-|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPVVAEVFSDDTRLVGRWWNKPFEYDLPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSATSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL

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Crispr_ID: NZ_CP019484_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019484_2

1225826-1225907

Orphan

Consensus_repeat	Method
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019484_2

>merge|NZ_CP019484|2|1225826-1225907|CRISPRCasFinder
TCGGCGGCGGTGGCGGGCAGGGCGGCGACGGTTCCGACGAGGCGGCGGGCAGGATCACCGTCGGGGGCGGCTTCGGCGGCAG

>NZ_CP019484|2|2|1225826-1225907|CRISPRCasFinder
TCGGCGGCGGTGGCGGGCAGGGCGGCG	ACGGTTCCGACGAGGCGGCGGGCAGGA
TCACCGTCGGGGGCGGCTTCGGCGGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019484.1\|WP_014527142.1\|1212138_1213302_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP019484.1\|WP_014527143.1\|1211026_1212049_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP019484.1\|WP_010975842.1\|1238882_1239506_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP019484.1\|WP_014527141.1\|1213307_1215350_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP019484.1\|WP_080591487.1\|1232776_1233319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_010975822.1\|1207581_1208856_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP019484.1\|WP_014527138.1\|1220255_1221407_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019484.1\|WP_080591489.1\|1230975_1231902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_088194950.1\|1233659_1233848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_014527144.1\|1208852_1210310_+\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NZ_CP019484.1\|WP_074853281.1\|1221497_1221890_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_010975834.1\|1228712_1229630_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP019484.1\|WP_010975829.1\|1218998_1219397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_095926570.1\|1232070_1232574_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP019484.1\|WP_088194951.1\|1235685_1237911_-\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP019484.1\|WP_095919496.1\|1229709_1230951_+\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP019484.1\|WP_015243022.1\|1215534_1218873_+\|RTX-toxins-related-Ca2+-binding-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP019484.1\|WP_088194952.1\|1239705_1240596_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP019484.1\|WP_014527139.1\|1219485_1220268_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP019484.1\|WP_088195194.1\|1233823_1235605_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|179625

Protein	Function_ID	Function_description	E-value
NZ_CP019484.1\|WP_014527142.1\|1212138_1213302_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_014527143.1\|1211026_1212049_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_010975842.1\|1238882_1239506_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NZ_CP019484.1\|WP_014527141.1\|1213307_1215350_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_010975822.1\|1207581_1208856_+\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP019484.1\|WP_014527144.1\|1208852_1210310_+\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NZ_CP019484.1\|WP_014527138.1\|1220255_1221407_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	4.76279e-171
NZ_CP019484.1\|WP_010975834.1\|1228712_1229630_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP019484.1\|WP_095926570.1\|1232070_1232574_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.13064e-16
NZ_CP019484.1\|WP_088194951.1\|1235685_1237911_-\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_CP019484.1\|WP_095919496.1\|1229709_1230951_+\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	1.87845e-67
NZ_CP019484.1\|WP_015243022.1\|1215534_1218873_+\|RTX-toxins-related-Ca2+-binding-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.62449e-24
NZ_CP019484.1\|WP_088194952.1\|1239705_1240596_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.50422e-30
NZ_CP019484.1\|WP_014527139.1\|1219485_1220268_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.45864e-66
NZ_CP019484.1\|WP_088195194.1\|1233823_1235605_+\|potassium-transporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	1.80518e-170

>NZ_CP019484.1|WP_074853281.1|1221497_1221890_+|hypothetical-protein
MRGGRIINTYKESHIQRVAHSHVEHGGARFAAVCRCMSAIFRGDTSDEARHQNQESPAEVFAGSIRTRRPSCVSVRAEHVAFFDRAGRRARRGGPGRRGVCGLQWKCNPDDRPGRLWIHMVGLLGRQWCR
>NZ_CP019484.1|WP_014527138.1|1220255_1221407_-|sensor-histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACYA
>NZ_CP019484.1|WP_014527139.1|1219485_1220268_-|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGGKVLDDTATVLPVVMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP019484.1|WP_010975829.1|1218998_1219397_+|hypothetical-protein
MKRPTNRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP019484.1|WP_015243022.1|1215534_1218873_+|RTX-toxins-related-Ca2+-binding-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP019484.1|WP_014527141.1|1213307_1215350_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP019484.1|WP_014527142.1|1212138_1213302_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP019484.1|WP_014527143.1|1211026_1212049_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFKKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP019484.1|WP_014527144.1|1208852_1210310_+|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP019484.1|WP_010975822.1|1207581_1208856_+|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NZ_CP019484.1|WP_010975834.1|1228712_1229630_+|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP019484.1|WP_095919496.1|1229709_1230951_+|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRRPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP019484.1|WP_080591489.1|1230975_1231902_+|hypothetical-protein
MQRWRRRPPLWQSITTIIPFRAPSQQRPPVRQEGQHPVPQVPRAPLPRRAPPALRSQHHLHRPRQCPLCLVPPGRPQRQWHPSSRLRRRRLPCRPRGRSFRRLRRPLPCRYREMTEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP019484.1|WP_095926570.1|1232070_1232574_+|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP019484.1|WP_080591487.1|1232776_1233319_+|hypothetical-protein
MVHPAKICLGTHDRVVQILLPSEHLVVIEIAPVEQIKGDAFEAAIPSFRRSARPSVRVVCQQSAPKRVAVVVESDYAVGHENMVTGEAFAGDDALGIKSGKGCLAQKHTGENGIRAISEEDAVRQSPAPHRVLFYAGLQRVQGRCTIKTESATISVVDDHCRVNQMIKCLRKEQNQLDVP
>NZ_CP019484.1|WP_088194950.1|1233659_1233848_+|hypothetical-protein
MGLIAMSERDLQRIEVLSQVIELDSKQVEWKDVRASTVAGAALRGARHLEIRSETWLLSPTA
>NZ_CP019484.1|WP_088195194.1|1233823_1235605_+|potassium-transporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCAILLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGGIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERKIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NZ_CP019484.1|WP_088194951.1|1235685_1237911_-|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTTAIGKSLSRIDGRLKVTGQATYAAEFNQEGQAHAVIVGSTVGLGRIESIDSAAVEKMPGVVAVISHLNAQRLAYNEHRGPIDPPAGERLHVLQGSEVRFFGEPVAIVVAETLDQAEHAANALKVTYSARPPQVDAHAGEQVVPAVARRPGARAEADVARGDADKALETAAVKVEAEYVIARENHNPMEPHATIAAWNGDRLTLWSKSQFVVNEQAEIAAIFGLPPGNVQVNCPFIGGAFGTSLRTWPHVTLAALAARHVNRPVKLVLTRKQMFFATGHRPYTLQRIALGAQPDGKLIGIVHEGAGETSRYEEFMEALTSVTSFMYSCPNVRTSYRLIPLDASTPTYMRGPGEASGIHALECAVDELAYKLRMDPIDLRRINEPQIDEGRQVPFSSRSMLKCYDLGAERFGWSRRTPEPGSMRDGRLLIGYGMANASYPCLFAPANARVRLLPDGTVEVEAAASDMGPGTYTSMSQVAAEYLGIPLERIRFSLGRSDFPATPPHGGSMTMASVGSAIRAACLDLQAKAAVLAAKGGGNAGLAGQSPEALEWRDGMLFVKGRSDRGVTYADLVSNGGESPLVGEGTAARDAETGQKYSMHSFGAVFAEVAIDPDVKTIKVRRALGAYGVGRVVNPKLATSQCIGGMIGGIGMAIMERTVLDRRNGRPINAHMADYLVPVNLDTPHIEAHFVDEEDTIVNPLGVKGLGEIALVGMSAAVSNAIHHATGRRVHELPIMIESLL
>NZ_CP019484.1|WP_010975842.1|1238882_1239506_-|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NZ_CP019484.1|WP_088194952.1|1239705_1240596_-|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPVVAEVFSDDTRLVGRWWNKPFEYDLPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSATSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL

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Crispr_ID: NZ_CP019484_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019484_3

1226006-1226110

Orphan

Consensus_repeat	Method
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019484_3

>merge|NZ_CP019484|3|1226006-1226110|CRISPRCasFinder
TCGGCGGCGGCGGCGGCGTCGGCGGCGCCGGAAGCAGCACGGCCGCCGAAAAAGAGCACAGCCACACGATCGATCTCGTCGTCGGCGGCAGCGGCGGTGTCGGCG

>NZ_CP019484|3|3|1226006-1226110|CRISPRCasFinder
TCGGCGGCGGCGGCGGCGTCGGCGGCG	CCGGAAGCAGCACGGCCGCCGAAAAAGAGCACAGCCACACGATCGATCTCG
TCGTCGGCGGCAGCGGCGGTGTCGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019484.1\|WP_014527142.1\|1212138_1213302_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP019484.1\|WP_014527143.1\|1211026_1212049_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP019484.1\|WP_010975842.1\|1238882_1239506_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP019484.1\|WP_014527141.1\|1213307_1215350_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP019484.1\|WP_080591487.1\|1232776_1233319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_010975822.1\|1207581_1208856_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP019484.1\|WP_014527138.1\|1220255_1221407_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019484.1\|WP_080591489.1\|1230975_1231902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_088194950.1\|1233659_1233848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_014527144.1\|1208852_1210310_+\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294
NZ_CP019484.1\|WP_074853281.1\|1221497_1221890_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_010975834.1\|1228712_1229630_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP019484.1\|WP_010975829.1\|1218998_1219397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019484.1\|WP_095926570.1\|1232070_1232574_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP019484.1\|WP_088194951.1\|1235685_1237911_-\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP019484.1\|WP_095919496.1\|1229709_1230951_+\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP019484.1\|WP_015243022.1\|1215534_1218873_+\|RTX-toxins-related-Ca2+-binding-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP019484.1\|WP_088194952.1\|1239705_1240596_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP019484.1\|WP_014527139.1\|1219485_1220268_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP019484.1\|WP_088195194.1\|1233823_1235605_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|179625

Protein	Function_ID	Function_description	E-value
NZ_CP019484.1\|WP_014527142.1\|1212138_1213302_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_014527143.1\|1211026_1212049_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_010975842.1\|1238882_1239506_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NZ_CP019484.1\|WP_014527141.1\|1213307_1215350_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019484.1\|WP_010975822.1\|1207581_1208856_+\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP019484.1\|WP_014527144.1\|1208852_1210310_+\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0
NZ_CP019484.1\|WP_014527138.1\|1220255_1221407_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	4.76279e-171
NZ_CP019484.1\|WP_010975834.1\|1228712_1229630_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP019484.1\|WP_095926570.1\|1232070_1232574_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.13064e-16
NZ_CP019484.1\|WP_088194951.1\|1235685_1237911_-\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_CP019484.1\|WP_095919496.1\|1229709_1230951_+\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	1.87845e-67
NZ_CP019484.1\|WP_015243022.1\|1215534_1218873_+\|RTX-toxins-related-Ca2+-binding-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.62449e-24
NZ_CP019484.1\|WP_088194952.1\|1239705_1240596_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.50422e-30
NZ_CP019484.1\|WP_014527139.1\|1219485_1220268_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.45864e-66
NZ_CP019484.1\|WP_088195194.1\|1233823_1235605_+\|potassium-transporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	1.80518e-170

>NZ_CP019484.1|WP_074853281.1|1221497_1221890_+|hypothetical-protein
MRGGRIINTYKESHIQRVAHSHVEHGGARFAAVCRCMSAIFRGDTSDEARHQNQESPAEVFAGSIRTRRPSCVSVRAEHVAFFDRAGRRARRGGPGRRGVCGLQWKCNPDDRPGRLWIHMVGLLGRQWCR
>NZ_CP019484.1|WP_014527138.1|1220255_1221407_-|sensor-histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACYA
>NZ_CP019484.1|WP_014527139.1|1219485_1220268_-|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGGKVLDDTATVLPVVMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP019484.1|WP_010975829.1|1218998_1219397_+|hypothetical-protein
MKRPTNRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP019484.1|WP_015243022.1|1215534_1218873_+|RTX-toxins-related-Ca2+-binding-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP019484.1|WP_014527141.1|1213307_1215350_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP019484.1|WP_014527142.1|1212138_1213302_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP019484.1|WP_014527143.1|1211026_1212049_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFKKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP019484.1|WP_014527144.1|1208852_1210310_+|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP019484.1|WP_010975822.1|1207581_1208856_+|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NZ_CP019484.1|WP_010975834.1|1228712_1229630_+|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP019484.1|WP_095919496.1|1229709_1230951_+|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRRPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP019484.1|WP_080591489.1|1230975_1231902_+|hypothetical-protein
MQRWRRRPPLWQSITTIIPFRAPSQQRPPVRQEGQHPVPQVPRAPLPRRAPPALRSQHHLHRPRQCPLCLVPPGRPQRQWHPSSRLRRRRLPCRPRGRSFRRLRRPLPCRYREMTEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP019484.1|WP_095926570.1|1232070_1232574_+|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCFICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP019484.1|WP_080591487.1|1232776_1233319_+|hypothetical-protein
MVHPAKICLGTHDRVVQILLPSEHLVVIEIAPVEQIKGDAFEAAIPSFRRSARPSVRVVCQQSAPKRVAVVVESDYAVGHENMVTGEAFAGDDALGIKSGKGCLAQKHTGENGIRAISEEDAVRQSPAPHRVLFYAGLQRVQGRCTIKTESATISVVDDHCRVNQMIKCLRKEQNQLDVP
>NZ_CP019484.1|WP_088194950.1|1233659_1233848_+|hypothetical-protein
MGLIAMSERDLQRIEVLSQVIELDSKQVEWKDVRASTVAGAALRGARHLEIRSETWLLSPTA
>NZ_CP019484.1|WP_088195194.1|1233823_1235605_+|potassium-transporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCAILLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGGIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERKIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NZ_CP019484.1|WP_088194951.1|1235685_1237911_-|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MTTAIGKSLSRIDGRLKVTGQATYAAEFNQEGQAHAVIVGSTVGLGRIESIDSAAVEKMPGVVAVISHLNAQRLAYNEHRGPIDPPAGERLHVLQGSEVRFFGEPVAIVVAETLDQAEHAANALKVTYSARPPQVDAHAGEQVVPAVARRPGARAEADVARGDADKALETAAVKVEAEYVIARENHNPMEPHATIAAWNGDRLTLWSKSQFVVNEQAEIAAIFGLPPGNVQVNCPFIGGAFGTSLRTWPHVTLAALAARHVNRPVKLVLTRKQMFFATGHRPYTLQRIALGAQPDGKLIGIVHEGAGETSRYEEFMEALTSVTSFMYSCPNVRTSYRLIPLDASTPTYMRGPGEASGIHALECAVDELAYKLRMDPIDLRRINEPQIDEGRQVPFSSRSMLKCYDLGAERFGWSRRTPEPGSMRDGRLLIGYGMANASYPCLFAPANARVRLLPDGTVEVEAAASDMGPGTYTSMSQVAAEYLGIPLERIRFSLGRSDFPATPPHGGSMTMASVGSAIRAACLDLQAKAAVLAAKGGGNAGLAGQSPEALEWRDGMLFVKGRSDRGVTYADLVSNGGESPLVGEGTAARDAETGQKYSMHSFGAVFAEVAIDPDVKTIKVRRALGAYGVGRVVNPKLATSQCIGGMIGGIGMAIMERTVLDRRNGRPINAHMADYLVPVNLDTPHIEAHFVDEEDTIVNPLGVKGLGEIALVGMSAAVSNAIHHATGRRVHELPIMIESLL
>NZ_CP019484.1|WP_010975842.1|1238882_1239506_-|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NZ_CP019484.1|WP_088194952.1|1239705_1240596_-|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPVVAEVFSDDTRLVGRWWNKPFEYDLPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSATSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651661-651708	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085079-1085126	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1053905-1053952	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636655-636702	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151301-1151348	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233702-233749	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644720-644767	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634529-634576	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	655818-655865	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302457-1302504	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895953-896000	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772699-772746	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558706-558753	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292156-292203	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423320-1423367	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373071-373118	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795261-795308	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658334-658381	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225658-1225705	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998341-998388	0	1.0
NZ_CP019484_1	1.1\|1225658\|48\|NZ_CP019484\|CRISPRCasFinder	1225658-1225705	48	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085084-1085131	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085274-1085300	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054100-1054126	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151496-1151522	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656013-656039	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772894-772920	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292351-292377	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373266-373292	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225853-1225879	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998536-998562	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085279-1085305	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651487-651513	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636481-636507	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233528-233554	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644546-644572	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634355-634381	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302283-1302309	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895779-895805	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558532-558558	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423146-1423172	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795087-795113	0	1.0
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658160-658186	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651283-651333	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636277-636327	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233324-233374	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644342-644392	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634151-634201	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302079-1302129	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895575-895625	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558328-558378	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422942-1422992	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794883-794933	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657956-658006	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085454-1085504	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151676-1151726	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773074-773124	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292531-292581	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373446-373496	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1226033-1226083	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998716-998766	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085459-1085509	0	1.0
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054280-1054330	1	0.98
NZ_CP019484_3	3.1\|1226033\|51\|NZ_CP019484\|CRISPRCasFinder	1226033-1226083	51	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656190-656240	1	0.98
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	778651-778677	5	0.815
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	405901-405927	5	0.815
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP049043	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_6, complete sequence	43383-43409	5	0.815
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	MN585980	Microbacterium phage Gina, complete genome	24050-24076	5	0.815
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	MN586059	Microbacterium phage Teamocil, complete genome	24149-24175	5	0.815
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	341978-342004	6	0.778
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	339070-339096	6	0.778
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	345316-345342	6	0.778
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	353491-353517	6	0.778
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	339070-339096	6	0.778
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	562461-562487	6	0.778
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	MK279840	Mycobacterium phage JacoRen57, complete genome	26434-26460	7	0.741
NZ_CP019484_2	2.1\|1225853\|27\|NZ_CP019484\|CRISPRCasFinder	1225853-1225879	27	NZ_CP015090	Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence	75369-75395	7	0.741

1. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

2. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

3. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

4. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

5. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

6. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

7. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

8. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

9. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

10. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

11. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

12. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

13. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

14. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

15. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

16. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

17. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

18. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

19. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

20. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

21. spacer 1.1|1225658|48|NZ_CP019484|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

22. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

23. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

24. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

25. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

26. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

27. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

28. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

29. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

30. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

31. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

32. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

33. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

34. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

35. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

36. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

37. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

38. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

39. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

40. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

41. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

42. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

43. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

44. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

45. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

46. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

47. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

48. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

49. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

50. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

51. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

52. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

53. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

54. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

55. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

56. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

57. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

58. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

59. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

60. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

61. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

62. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.98

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagtacagccacacgatcgatctcg	Protospacer
*****************************.*********************

63. spacer 3.1|1226033|51|NZ_CP019484|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.98

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagtacagccacacgatcgatctcg	Protospacer
*****************************.*********************

64. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
tggaatccgacgaggcggcgggcacga	Protospacer
  *. ******************* **

65. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
cggcttccggcgtggcggcgggcagga	Protospacer
  * *****.** **************

66. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP049043 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_6, complete sequence) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
gccgttccgagaaggcggcgggcaggt	Protospacer
.* ******* .**************

67. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to MN585980 (Microbacterium phage Gina, complete genome) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
gcggctccgtcgaggcggcgggcacca	Protospacer
.***.**** **************  *

68. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to MN586059 (Microbacterium phage Teamocil, complete genome) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
gcggctccgtcgaggcggcgggcacca	Protospacer
.***.**** **************  *

69. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

70. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

71. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

72. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

73. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

74. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

75. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to MK279840 (Mycobacterium phage JacoRen57, complete genome) position: , mismatch: 7, identity: 0.741

acggttccgacgaggcggcgggcagga	CRISPR spacer
gtacgcccgacgaggcggcggtcagga	Protospacer
...  .*************** *****

76. spacer 2.1|1225853|27|NZ_CP019484|CRISPRCasFinder matches to NZ_CP015090 (Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence) position: , mismatch: 7, identity: 0.741

acggttccgacgaggcggcgggcagga	CRISPR spacer
ttggttccggcgaggcggcgggcgtag	Protospacer
 .*******.*************. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 8612

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014530161.1\|509_1514_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.7e-13	26.5
WP_095919650.1\|1656_2562_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.9e-70	49.3
WP_014530159.1\|2573_3350_+	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_010976194.1\|3353_4631_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.7e-74	42.8
WP_010976195.1\|4747_5716_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_014530158.1\|5712_7035_-	ABC transporter permease	NA	NA	NA	NA
WP_014530157.1\|7031_8612_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-16	27.2

DBSCAN-SWA_2

13417 : 16962

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010976203.1\|13417_14302_-	2-hydroxy-3-oxopropionate reductase	A0A077SLF7	Escherichia_phage	1.1e-19	26.0
WP_014530154.1\|14307_15123_-	hydroxypyruvate isomerase	NA	NA	NA	NA
WP_013850363.1\|15177_16962_-	glyoxylate carboligase	E4WLQ6	Ostreococcus_tauri_virus	1.6e-43	27.8

DBSCAN-SWA_3

19987 : 27651

Sinorhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015456731.1\|19987_22444_+	DNA ligase D	A0A291AUP8	Sinorhizobium_phage	2.4e-53	42.7
WP_003526412.1\|22536_23421_+	Ku protein	NA	NA	NA	NA
WP_095919654.1\|23420_24506_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014527777.1\|24507_25149_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_095919656.1\|25156_25930_+	exodeoxyribonuclease III	A0A0N9QXX6	Chrysochromulina_ericina_virus	1.3e-13	24.9
WP_010976213.1\|25926_26253_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_027991440.1\|26312_26657_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_014527775.1\|26844_27651_-	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	2.8e-19	33.2

DBSCAN-SWA_4

43094 : 43646

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003530530.1\|43094_43646_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	3.5e-13	37.7

DBSCAN-SWA_5

48169 : 49711

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003530544.1\|48169_49711_+	sugar ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.0e-14	28.9

DBSCAN-SWA_6

53263 : 56080

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919664.1\|53263_54289_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.5e-22	27.5
WP_095919666.1\|54553_56080_+	sugar ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	2.0e-10	26.6

DBSCAN-SWA_7

59890 : 60568

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003530564.1\|59890_60568_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.5e-26	31.8

DBSCAN-SWA_8

66598 : 67633

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003530581.1\|66598_67633_-	glutamine synthetase	A0A1V0SG77	Hokovirus	2.6e-70	42.7

DBSCAN-SWA_9

70784 : 73944

Micromonas_pusilla_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010976243.1\|70784_72248_+	mannitol dehydrogenase family protein	G9E6E2	Micromonas_pusilla_virus	6.8e-40	29.4
WP_010976244.1\|72267_73017_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-12	31.2
WP_010976245.1\|73047_73944_-	3-hydroxyisobutyrate dehydrogenase	A0A077SLF7	Escherichia_phage	5.0e-25	30.8

DBSCAN-SWA_10

83837 : 84572

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003530623.1\|83837_84572_-	phosphonate metabolism transcriptional regulator PhnF	A0A2H5BLU5	Streptomyces_phage	5.5e-06	45.2

DBSCAN-SWA_11

87764 : 89282

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017275267.1\|87764_88541_+	phosphonate C-P lyase system protein PhnK	G3M9Y6	Bacillus_virus	9.9e-14	27.0
WP_013850329.1\|88574_89282_+	phosphonate C-P lyase system protein PhnL	F2Y302	Organic_Lake_phycodnavirus	4.4e-08	30.1

DBSCAN-SWA_12

102343 : 105944

Lake_Baikal_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919682.1\|102343_104293_+	adenylate/guanylate cyclase domain-containing protein	A0A2H4N7Z5	Lake_Baikal_phage	3.8e-62	36.5
WP_095919684.1\|104482_105199_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.2e-10	24.5
WP_095919686.1\|105179_105944_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-08	20.7

DBSCAN-SWA_13

109264 : 111980

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010976272.1\|109264_110035_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-28	34.0
WP_017275836.1\|110045_111038_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_017266884.1\|111134_111980_-	ABC transporter permease	G3M9Y4	Bacillus_virus	8.6e-19	26.8

DBSCAN-SWA_14

119755 : 120562

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919696.1\|119755_120562_-	3-oxoadipate enol-lactonase	A0A2R8FDA5	Brazilian_cedratvirus	3.9e-05	23.2

DBSCAN-SWA_15

135115 : 143504

Ochrobactrum_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014530096.1\|135115_137956_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	8.5e-79	44.8
WP_095919707.1\|138283_138703_+	DoxX family protein	NA	NA	NA	NA
WP_013850289.1\|138849_140115_+	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	5.1e-116	56.5
WP_095919709.1\|140118_141180_+	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	7.9e-46	36.3
WP_003529443.1\|141242_141671_-	hypothetical protein	NA	NA	NA	NA
WP_095919711.1\|142037_142733_-	urea ABC transporter ATP-binding subunit UrtE	G9BWD6	Planktothrix_phage	8.6e-17	28.4
WP_095919713.1\|142751_143504_-	urea ABC transporter ATP-binding protein UrtD	A0A2H4PQG7	Staphylococcus_phage	1.6e-13	28.1

DBSCAN-SWA_16

149530 : 157362

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919719.1\|149530_152911_+	response regulator	A0A1V0SGX0	Hokovirus	1.0e-30	27.2
WP_010976307.1\|152897_153827_+	response regulator transcription factor	NA	NA	NA	NA
WP_010976308.1\|153939_155265_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_095919824.1\|155496_157362_+	sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.4e-08	34.2

DBSCAN-SWA_17

168918 : 170442

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919727.1\|168918_170442_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.1e-15	29.0

DBSCAN-SWA_18

176056 : 177142

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017266418.1\|176056_177142_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	4.6e-25	32.5

DBSCAN-SWA_19

182353 : 183376

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919739.1\|182353_183376_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.7e-27	28.5

DBSCAN-SWA_20

198377 : 200048

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919751.1\|198377_200048_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-17	28.2

DBSCAN-SWA_21

212382 : 215714

Vaccinia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088198807.1\|212382_214647_+	glycoside hydrolase family 2 protein	B9U1V4	Vaccinia_virus	2.6e-30	26.6
WP_017263927.1\|214643_215714_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.0e-24	35.6

DBSCAN-SWA_22

219534 : 234223

Tupanvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027989227.1\|219534_221652_+	catalase	A0A2K9L0T1	Tupanvirus	6.4e-140	48.3
WP_095919216.1\|221677_222745_+	ATP-dependent DNA ligase	C5IHN5	Burkholderia_virus	8.6e-08	30.1
WP_095919218.1\|222731_223661_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.2e-05	25.6
WP_013850243.1\|223755_224823_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_013850242.1\|225049_225829_+	ZIP family metal transporter	NA	NA	NA	NA
WP_017266831.1\|225860_228404_-	NAD-dependent epimerase/dehydratase family protein	A0A2H4QTS1	Eastern_grey_kangaroopox_virus	7.8e-07	24.9
WP_013850240.1\|228459_229704_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_013850239.1\|229757_230759_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.5e-27	29.1
WP_010974943.1\|230772_231729_-	ABC transporter permease	NA	NA	NA	NA
WP_095919219.1\|231725_232718_-	ABC transporter permease	NA	NA	NA	NA
WP_013850238.1\|232717_234223_-	sugar ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	9.3e-08	26.0

DBSCAN-SWA_23

264741 : 268412

Ochrobactrum_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919764.1\|264741_266052_-	replication initiation protein RepC	L7TKN6	Rhizobium_phage	1.1e-17	27.5
WP_095919232.1\|266207_267212_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	2.4e-60	39.0
WP_010974972.1\|267215_268412_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	2.1e-116	55.4

DBSCAN-SWA_24

272667 : 273495

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010974977.1\|272667_273495_-	alpha/beta hydrolase	A0A291AV30	Mycobacterium_phage	2.6e-12	25.7

DBSCAN-SWA_25

282093 : 282894

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919238.1\|282093_282894_+	ABC transporter ATP-binding protein	M1I2G3	Paramecium_bursaria_Chlorella_virus	7.6e-09	28.1

DBSCAN-SWA_26

289852 : 291340

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919243.1\|289852_291340_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.3e-173	66.7

DBSCAN-SWA_27

306321 : 308298

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088199930.1\|306321_308298_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.6e-28	45.3

DBSCAN-SWA_28

312971 : 314789

Ostreococcus_lucimarinus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919249.1\|312971_314789_+	pyruvate oxidase	M4QSI1	Ostreococcus_lucimarinus_virus	5.6e-15	22.6

DBSCAN-SWA_29

331913 : 335407

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919259.1\|331913_333554_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-18	29.6
WP_027991336.1\|333550_334438_+	DMT family transporter	NA	NA	NA	NA
WP_027988312.1\|334474_335407_-	2-hydroxyacid dehydrogenase	A0A2R8FCS0	Cedratvirus	4.0e-17	26.2

DBSCAN-SWA_30

342711 : 346572

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017265847.1\|342711_342966_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2R2Z2Y1	Escherichia_phage	1.2e-11	47.0
WP_003536795.1\|343049_343325_-	type II toxin-antitoxin system ParD family antitoxin	A0A0N7C055	Escherichia_phage	9.9e-17	53.6
WP_013850166.1\|344027_344924_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_040121158.1\|345045_346572_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.3e-19	29.5

DBSCAN-SWA_31

353261 : 358705

Acinetobacter_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975049.1\|353261_353747_+	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	1.1e-21	39.5
WP_095919267.1\|353743_356062_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	A0A0P0I429	Acinetobacter_phage	2.4e-63	27.2
WP_013850159.1\|356061_357111_+	GTP-binding protein	NA	NA	NA	NA
WP_010975052.1\|357313_358705_-	purine permease	Q9KX94	Enterobacteria_phage	2.3e-29	28.5

DBSCAN-SWA_32

364576 : 366223

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975058.1\|364576_366223_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-20	30.9

DBSCAN-SWA_33

380519 : 385000

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003532065.1\|380519_381506_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.8e-13	26.3
WP_095919273.1\|382016_383867_+	iron ABC transporter permease	NA	NA	NA	NA
WP_010975068.1\|383866_385000_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-22	31.4

DBSCAN-SWA_34

391744 : 399301

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975075.1\|391744_393988_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	7.3e-17	24.0
WP_010975076.1\|394094_394766_+	hypothetical protein	NA	NA	NA	NA
WP_010975077.1\|394762_395116_+	hypothetical protein	NA	NA	NA	NA
WP_010975078.1\|395189_396002_-	quinoprotein dehydrogenase-associated SoxYZ-like carrier	A0A218MKF3	uncultured_virus	1.3e-16	32.9
WP_080567676.1\|396136_397234_+	quinoprotein relay system zinc metallohydrolase 2	NA	NA	NA	NA
WP_010975080.1\|397362_398004_-	hypothetical protein	NA	NA	NA	NA
WP_010975081.1\|398173_399301_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.3e-35	29.1

DBSCAN-SWA_35

402625 : 403156

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975085.1\|402625_403156_+	c-type cytochrome, methanol metabolism-related	A0A218MKF6	uncultured_virus	2.3e-22	50.5

DBSCAN-SWA_36

409765 : 411114

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527583.1\|409765_410389_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.1e-18	31.6
WP_003528736.1\|410385_411114_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.2e-18	30.8

DBSCAN-SWA_37

414198 : 415134

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975098.1\|414198_415134_-	CbbX protein	G3MAX6	Bacillus_virus	1.6e-45	37.3

DBSCAN-SWA_38

421126 : 422176

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527577.1\|421126_422176_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.4e-39	30.4

DBSCAN-SWA_39

427096 : 427810

Mollivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975106.1\|427096_427810_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	5.4e-06	28.0

DBSCAN-SWA_40

436022 : 438124

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013850113.1\|436022_437387_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	6.9e-10	22.4
WP_013850112.1\|437386_438124_-	response regulator	W8CYM9	Bacillus_phage	4.8e-26	32.5

DBSCAN-SWA_41

450285 : 454006

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017270577.1\|450285_451377_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	Q6GZ03	Mycoplasma_phage	5.9e-20	44.2
WP_013850102.1\|451496_451841_+	hypothetical protein	NA	NA	NA	NA
WP_013850101.1\|451880_452072_+	hypothetical protein	NA	NA	NA	NA
WP_013850100.1\|452168_452963_-	TIGR04290 family methyltransferase	NA	NA	NA	NA
WP_014527566.1\|452965_454006_-	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	6.3e-72	44.0

DBSCAN-SWA_42

458505 : 460730

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919282.1\|458505_459627_-	NAD-dependent epimerase/dehydratase family protein	M1I5F1	Acanthocystis_turfacea_Chlorella_virus	7.1e-29	29.4
WP_010975137.1\|459623_460730_-	NAD-dependent epimerase/dehydratase family protein	A0A0E3IB24	Synechococcus_phage	6.3e-30	28.9

DBSCAN-SWA_43

465003 : 466107

Stenotrophomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527561.1\|465003_466107_+	inositol-3-phosphate synthase	A0A0H4IPK5	Stenotrophomonas_phage	6.2e-78	44.2

DBSCAN-SWA_44

480477 : 481200

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975156.1\|480477_481200_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-28	39.6

DBSCAN-SWA_45

493793 : 496412

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919292.1\|493793_495260_-	NAD(P)/FAD-dependent oxidoreductase	V9VEY6	Lactococcus_phage	3.2e-05	27.3
WP_017270584.1\|495341_496412_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.6e-30	36.6

DBSCAN-SWA_46

520484 : 521431

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011970797.1\|520484_521431_-\|transposase	IS630-like element ISRm2011-2 family transposase	S5VXX4	Leptospira_phage	1.0e-12	24.7

DBSCAN-SWA_47

528634 : 530221

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033050622.1\|528634_530221_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-10	27.6

DBSCAN-SWA_48

541005 : 542034

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975210.1\|541005_542034_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-23	32.0

DBSCAN-SWA_49

545182 : 550099

Tetraselmis_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157749813.1\|545182_546001_+	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	7.7e-49	50.7
WP_080590675.1\|546104_546308_+	hypothetical protein	NA	NA	NA	NA
WP_080676572.1\|546451_548572_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.4e-25	27.8
WP_080591149.1\|548786_548951_+	DUF2950 family protein	NA	NA	NA	NA
WP_010975215.1\|549187_550099_+	formylglycine-generating enzyme family protein	A0A075BSL8	Microcystis_phage	5.2e-14	28.7

DBSCAN-SWA_50

558242 : 558701

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003525768.1\|558242_558701_-	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	3.0e-10	36.6

DBSCAN-SWA_51

567934 : 569485

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919314.1\|567934_569485_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.7e-17	26.9

DBSCAN-SWA_52

574382 : 584147

Hokovirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975234.1\|574382_577136_+	response regulator	A0A1V0SGX0	Hokovirus	2.1e-37	31.0
WP_010975235.1\|577160_577526_+	response regulator	Q6XM27	Feldmannia_irregularis_virus	9.1e-10	32.5
WP_013850023.1\|577534_579097_+	response regulator	W8CYM9	Bacillus_phage	2.4e-14	34.5
WP_013850022.1\|579213_580509_+	hypothetical protein	NA	NA	NA	NA
WP_010975238.1\|580549_581281_+	hypothetical protein	A0A2L0V127	Agrobacterium_phage	3.3e-11	31.6
WP_010975239.1\|581366_582164_-	ion transporter	NA	NA	NA	NA
WP_010975240.1\|582254_583055_-	inositol monophosphatase	NA	NA	NA	NA
WP_010975241.1\|583085_584147_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.7e-29	36.1

DBSCAN-SWA_53

592346 : 593027

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975248.1\|592346_593027_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-35	42.9

DBSCAN-SWA_54

599678 : 602144

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919319.1\|599678_601064_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.3e-11	22.9
WP_013850007.1\|601094_602144_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.0e-29	35.1

DBSCAN-SWA_55

610698 : 623404

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919322.1\|610698_611724_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	4.7e-19	29.8
WP_074853081.1\|611833_612022_-	hypothetical protein	NA	NA	NA	NA
WP_010975264.1\|612159_613392_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_095919324.1\|613373_615368_+	glycosyltransferase	M1I4N4	Acanthocystis_turfacea_Chlorella_virus	2.0e-34	34.0
WP_013849995.1\|615403_616117_-	transcriptional regulator NanR	NA	NA	NA	NA
WP_010975267.1\|616255_617512_+	ribulose-bisphosphate carboxylase	NA	NA	NA	NA
WP_014530741.1\|617535_618864_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.1e-15	28.4
WP_080567703.1\|618903_621153_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	A0A0P0I429	Acinetobacter_phage	4.3e-41	23.9
WP_014530739.1\|621196_622180_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
WP_014527493.1\|622176_622743_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	6.3e-18	33.5
WP_010975272.1\|622909_623404_+	hydrolase	A0A0S4L149	Pseudomonas_phage	8.0e-25	37.6

DBSCAN-SWA_56

634543 : 638919

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008541.1\|634543_635593_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	Q6GZ03	Mycoplasma_phage	1.1e-18	47.3
WP_013849973.1\|635714_636341_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_095919329.1\|636458_637532_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_095919768.1\|637542_638919_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	4.2e-15	22.3

DBSCAN-SWA_57

642850 : 643636

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013849969.1\|642850_643636_+	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	G9BWD6	Planktothrix_phage	1.9e-28	37.9

DBSCAN-SWA_58

656721 : 660968

Megavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975306.1\|656721_657780_+	L-idonate 5-dehydrogenase	A0A2P1EIJ9	Megavirus	1.0e-08	28.1
WP_010975307.1\|657789_658998_+	mannonate dehydratase	NA	NA	NA	NA
WP_015243358.1\|659273_660968_+	EAL domain-containing protein	G3MA91	Bacillus_virus	6.1e-16	30.8

DBSCAN-SWA_59

668485 : 674715

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975316.1\|668485_669232_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	3.4e-19	33.9
WP_010975317.1\|669312_670461_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010975318.1\|670820_671867_+	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	3.2e-84	48.3
WP_015243351.1\|671866_672853_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.6e-53	39.7
WP_095926552.1\|672849_674715_+	glycosyltransferase	A0A1J0F9E6	Only_Syngen_Nebraska_virus	1.5e-76	40.6

DBSCAN-SWA_60

684986 : 686819

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975332.1\|684986_686819_+	carbamoyltransferase	A0A1B1IVF2	uncultured_Mediterranean_phage	8.2e-67	31.4

DBSCAN-SWA_61

691816 : 697101

Mycoplasma_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919334.1\|691816_693619_+	dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.5e-07	30.7
WP_010975339.1\|693615_694413_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-17	29.8
WP_010975340.1\|694419_695202_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010975341.1\|695325_697101_+	N-acetylglutaminylglutamine amidotransferase	R4TIC1	Phaeocystis_globosa_virus	3.2e-31	28.8

DBSCAN-SWA_62

701339 : 702869

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975345.1\|701339_702869_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.5e-16	26.2

DBSCAN-SWA_63

709972 : 711724

Chrysochromulina_ericina_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975353.1\|709972_710875_-	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	3.4e-05	25.1
WP_010975354.1\|710989_711724_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	8.5e-07	24.8

DBSCAN-SWA_64

715759 : 717370

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919772.1\|715759_717370_-	GMC family oxidoreductase	A0A1V0S9M4	Catovirus	9.5e-51	29.1

DBSCAN-SWA_65

724602 : 726144

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919774.1\|724602_726144_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-12	28.0

DBSCAN-SWA_66

729269 : 734804

Cedratvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975368.1\|729269_730796_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A285PWH2	Cedratvirus	2.2e-12	27.5
WP_010975369.1\|730860_731844_-	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_095919340.1\|732032_732800_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_015243314.1\|732846_733995_+	galactonate dehydratase	Q6A202	Oenococcus_phage	4.4e-58	36.5
WP_010975372.1\|734024_734804_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.7e-11	27.7

DBSCAN-SWA_67

752310 : 753321

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017276262.1\|752310_753321_-	hydroxyacid dehydrogenase	M1HHP3	Acanthocystis_turfacea_Chlorella_virus	5.6e-17	34.9

DBSCAN-SWA_68

766457 : 770042

EBPR_siphovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074935068.1\|766457_766619_+	hypothetical protein	F8TVB4	EBPR_siphovirus	2.8e-11	59.2
WP_095919361.1\|766621_766840_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_013850962.1\|767040_767343_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_014530645.1\|768234_768966_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_013850959.1\|769341_769536_-	hypothetical protein	NA	NA	NA	NA
WP_095919362.1\|769532_770042_-	DUF1643 domain-containing protein	A0A0U1W068	Pseudomonas_phage	6.3e-33	51.0

DBSCAN-SWA_69

781677 : 785262

EBPR_siphovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074935068.1\|781677_781839_+	hypothetical protein	F8TVB4	EBPR_siphovirus	2.8e-11	59.2
WP_095919361.1\|781841_782060_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_013850962.1\|782260_782563_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_014530645.1\|783454_784186_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_013850959.1\|784561_784756_-	hypothetical protein	NA	NA	NA	NA
WP_095919362.1\|784752_785262_-	DUF1643 domain-containing protein	A0A0U1W068	Pseudomonas_phage	6.3e-33	51.0

DBSCAN-SWA_70

795718 : 806314

uncultured_Mediterranean_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975426.1\|795718_796408_-	hypothetical protein	A0A1B1ITS7	uncultured_Mediterranean_phage	1.4e-40	42.2
WP_017275880.1\|796540_798178_+	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_095919785.1\|798153_798891_-	hypothetical protein	NA	NA	NA	NA
WP_095919371.1\|799162_800152_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	2.8e-29	34.5
WP_095919373.1\|800264_802298_+	acyltransferase	B5WZU0	Pseudomonas_phage	3.1e-75	43.0
WP_010975431.1\|802443_802764_+	hypothetical protein	NA	NA	NA	NA
WP_026029985.1\|802830_804009_-	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_095919375.1\|804508_806314_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.1e-51	27.8

DBSCAN-SWA_71

811202 : 812294

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095926554.1\|811202_812294_+	fatty acid desaturase family protein	V5LQD0	Emiliania_huxleyi_virus	1.8e-05	26.8

DBSCAN-SWA_72

817621 : 818293

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095926556.1\|817621_818293_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.4e-08	26.1

DBSCAN-SWA_73

826443 : 828012

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969846.1\|826443_828012_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	1.5e-45	32.6

DBSCAN-SWA_74

834216 : 835734

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080590320.1\|834216_835734_-	autoinducer 2 ABC transporter ATP-binding protein LsrA	A0A2H4PQG7	Staphylococcus_phage	1.2e-10	22.6

DBSCAN-SWA_75

841056 : 841485

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095926560.1\|841056_841485_+	hypothetical protein	S5VY04	Leptospira_phage	3.0e-20	41.0

DBSCAN-SWA_76

849884 : 851642

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157749814.1\|849884_851642_+	dipeptide ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.4e-09	29.7

DBSCAN-SWA_77

855433 : 857344

Sinorhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074935244.1\|855433_857344_-	DNA ligase D	A0A076GD42	Sinorhizobium_phage	4.7e-57	38.8

DBSCAN-SWA_78

875645 : 876656

Paenibacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003534666.1\|875645_876656_+	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	3.5e-19	33.8

DBSCAN-SWA_79

880601 : 881372

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027993630.1\|880601_881372_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-29	38.8

DBSCAN-SWA_80

889681 : 890779

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975559.1\|889681_890779_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	3.9e-24	34.0

DBSCAN-SWA_81

899685 : 907187

Sinorhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975568.1\|899685_900144_-	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	1.3e-32	57.6
WP_010975569.1\|900394_900931_+	gluconokinase	NA	NA	NA	NA
WP_010975570.1\|900908_901127_+	hypothetical protein	NA	NA	NA	NA
WP_014527291.1\|901119_902283_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_014527290.1\|902310_903918_+	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	3.0e-20	54.4
WP_010975573.1\|903932_904316_+	RidA family protein	NA	NA	NA	NA
WP_095919428.1\|904332_906321_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA
WP_014527288.1\|906317_907187_+	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	9.4e-37	33.3

DBSCAN-SWA_82

910594 : 911698

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975578.1\|910594_911698_-	sulfate/molybdate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-30	36.9

DBSCAN-SWA_83

915944 : 921360

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003537164.1\|915944_916787_+	transporter substrate-binding domain-containing protein	A0A1B1IT51	uncultured_Mediterranean_phage	2.4e-05	22.3
WP_095919434.1\|916850_917513_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003537167.1\|917518_918178_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003537169.1\|918191_918959_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-29	40.3
WP_003537171.1\|918995_919391_+	RidA family protein	NA	NA	NA	NA
WP_074853581.1\|919384_920236_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_003537175.1\|920277_921360_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	Q6GZ03	Mycoplasma_phage	1.3e-16	51.7

DBSCAN-SWA_84

929086 : 934541

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003536044.1\|929086_930988_+	bifunctional sulfate adenylyltransferase/adenylyl-sulfate kinase NodQ	A0A2K9L0F0	Tupanvirus	2.3e-27	50.3
WP_013850782.1\|930984_931824_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_095919440.1\|931870_932611_+	histidinol-phosphatase	NA	NA	NA	NA
WP_003536050.1\|932607_933600_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_014527276.1\|933605_934541_+	NAD(P)-dependent oxidoreductase	A0A2H4UUK0	Bodo_saltans_virus	1.4e-06	24.7

DBSCAN-SWA_85

938565 : 940764

Megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095926567.1\|938565_940764_-	polysaccharide biosynthesis protein	L7Y3T9	Megavirus	4.4e-14	25.5

DBSCAN-SWA_86

944552 : 945770

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919791.1\|944552_945770_+	pectate lyase	A0A1B1IPS8	uncultured_Mediterranean_phage	5.9e-21	29.5

DBSCAN-SWA_87

956587 : 957778

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013850766.1\|956587_957778_+	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A2K9L470	Tupanvirus	9.6e-109	48.8

DBSCAN-SWA_88

966938 : 968315

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089413700.1\|966938_968315_-	nucleotide sugar dehydrogenase	M1HZW8	Acanthocystis_turfacea_Chlorella_virus	4.5e-33	28.6

DBSCAN-SWA_89

971359 : 973252

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919454.1\|971359_973252_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-08	26.2

DBSCAN-SWA_90

990007 : 991036

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017266870.1\|990007_991036_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.3e-31	37.7

DBSCAN-SWA_91

996062 : 997355

Moraxella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017266867.1\|996062_997355_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	7.6e-67	37.4

DBSCAN-SWA_92

1000627 : 1005349

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919459.1\|1000627_1002109_+	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	1.5e-106	44.6
WP_095919460.1\|1002122_1004456_+	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	5.0e-218	52.3
WP_080599904.1\|1004482_1005349_+	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	2.2e-22	30.6

DBSCAN-SWA_93

1010688 : 1011168

Agrobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003534040.1\|1010688_1011168_-	Hsp20 family protein	A0A2L0V0Y9	Agrobacterium_phage	2.8e-19	45.6

DBSCAN-SWA_94

1019726 : 1020518

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008315.1\|1019726_1020518_+	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	8.6e-13	27.6

DBSCAN-SWA_95

1026075 : 1030817

Erysipelothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080654681.1\|1026075_1027497_-	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-62	32.7
WP_017266705.1\|1027687_1028605_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_095919463.1\|1028682_1029882_+	ABC transporter permease	NA	NA	NA	NA
WP_003534353.1\|1029878_1030817_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	9.2e-14	46.2

DBSCAN-SWA_96

1036000 : 1037134

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008311.1\|1036000_1037134_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	7.0e-24	35.6

DBSCAN-SWA_97

1042323 : 1044243

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008308.1\|1042323_1044243_+	beta-N-acetylhexosaminidase	A0A2H4UUW7	Bodo_saltans_virus	2.5e-05	27.1

DBSCAN-SWA_98

1049661 : 1054005

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003534324.1\|1049661_1051197_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	4.6e-71	37.4
WP_017266696.1\|1051193_1052441_-	imidazolonepropionase	NA	NA	NA	NA
WP_095919469.1\|1052643_1054005_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.1e-27	28.7

DBSCAN-SWA_99

1062271 : 1063111

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008301.1\|1062271_1063111_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	33.0

DBSCAN-SWA_100

1069555 : 1082107

uncultured_Mediterranean_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008300.1\|1069555_1071445_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.7e-99	34.5
WP_017273579.1\|1071549_1072728_+	acetate kinase	NA	NA	NA	NA
WP_017266997.1\|1072764_1074240_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_095919475.1\|1074355_1075624_-	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	5.2e-28	27.8
WP_003529089.1\|1075836_1076667_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_013850698.1\|1077010_1078144_+	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	7.4e-18	27.8
WP_010975710.1\|1078161_1079265_+	glycosyltransferase	NA	NA	NA	NA
WP_010975711.1\|1079266_1080304_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_013850696.1\|1080313_1082107_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.2e-43	30.0

DBSCAN-SWA_101

1087719 : 1089321

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003529062.1\|1087719_1089321_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-21	34.4

DBSCAN-SWA_102

1097222 : 1098971

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088194940.1\|1097222_1098971_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.9e-22	32.0

DBSCAN-SWA_103

1102138 : 1106179

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975726.1\|1102138_1102810_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.0e-19	27.4
WP_010975727.1\|1103018_1104785_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_010975728.1\|1104896_1105277_+	hypothetical protein	NA	NA	NA	NA
WP_010975729.1\|1105347_1105527_+	hypothetical protein	NA	NA	NA	NA
WP_010975730.1\|1105519_1106179_+	serine/threonine protein phosphatase	V9QL63	Rhizobium_phage	4.2e-37	41.4

DBSCAN-SWA_104

1120938 : 1122708

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975741.1\|1120938_1122708_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	2.7e-22	24.9

DBSCAN-SWA_105

1132813 : 1137096

Enterobacteria_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975749.1\|1132813_1133695_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.9e-93	58.7
WP_013850675.1\|1133687_1134251_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.6e-29	42.4
WP_015243052.1\|1134262_1135333_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-91	49.7
WP_015008282.1\|1135329_1136232_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	1.1e-27	36.1
WP_014527182.1\|1136277_1137096_-	hypothetical protein	Q38324	Lactococcus_phage	6.8e-05	34.2

DBSCAN-SWA_106

1141773 : 1143507

Bordetella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074853271.1\|1141773_1142718_+	helix-turn-helix transcriptional regulator	A0A291LAM3	Bordetella_phage	4.8e-10	30.6
WP_010975761.1\|1142844_1143507_+	aldehyde dehydrogenase iron-sulfur subunit	A0A0P0IVM8	Acinetobacter_phage	4.1e-16	33.9

DBSCAN-SWA_107

1149744 : 1151238

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975768.1\|1149744_1151238_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-09	24.5

DBSCAN-SWA_108

1177123 : 1178182

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003532415.1\|1177123_1178182_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.1e-22	27.9

DBSCAN-SWA_109

1181500 : 1183012

Cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017272126.1\|1181500_1183012_-	sugar ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	3.2e-08	24.8

DBSCAN-SWA_110

1186946 : 1187837

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017268117.1\|1186946_1187837_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.4e-17	29.0

DBSCAN-SWA_111

1192639 : 1201035

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975810.1\|1192639_1193452_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	5.7e-28	35.0
WP_010975811.1\|1193444_1194272_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_010975812.1\|1194388_1194775_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_010975813.1\|1194799_1196200_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_095926569.1\|1196241_1198017_+	sulfoacetaldehyde acetyltransferase	G8DDL3	Micromonas_pusilla_virus	4.0e-26	23.8
WP_010975815.1\|1198077_1199115_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_015008267.1\|1199114_1200107_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_010975817.1\|1200249_1201035_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	8.8e-18	31.9

DBSCAN-SWA_112

1212138 : 1213302

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527142.1\|1212138_1213302_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.8e-26	40.8

DBSCAN-SWA_113

1220255 : 1221407

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527138.1\|1220255_1221407_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.7e-14	29.0

DBSCAN-SWA_114

1238882 : 1247324

uncultured_virus(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975842.1\|1238882_1239506_-	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	3.6e-14	35.3
WP_088194952.1\|1239705_1240596_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_095926571.1\|1240888_1242145_-	HAMP domain-containing histidine kinase	A0A2K9L0Z8	Tupanvirus	1.5e-06	32.1
WP_088194954.1\|1242149_1242848_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.2e-38	37.4
WP_088194955.1\|1242884_1243436_-	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_088194956.1\|1243570_1244107_-	transcriptional regulator	NA	NA	NA	NA
WP_074853260.1\|1244066_1244384_+	hypothetical protein	NA	NA	NA	NA
WP_088194957.1\|1244380_1245127_+	DUF899 family protein	NA	NA	NA	NA
WP_095919502.1\|1245334_1246963_-	chaperonin GroEL	A0A240F779	uncultured_virus	7.6e-181	60.5
WP_095919799.1\|1247009_1247324_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.8e-22	58.7

DBSCAN-SWA_115

1257717 : 1260201

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919514.1\|1257717_1260201_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	8.2e-102	35.3

DBSCAN-SWA_116

1268753 : 1274306

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919520.1\|1268753_1270271_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.7e-17	26.2
WP_095919522.1\|1270267_1271293_+	ABC transporter permease	NA	NA	NA	NA
WP_028005595.1\|1271289_1272258_+	sugar ABC transporter permease YjfF	NA	NA	NA	NA
WP_014527115.1\|1272275_1273010_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_013850589.1\|1273154_1274306_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-25	32.0

DBSCAN-SWA_117

1286968 : 1288057

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088201365.1\|1286968_1288057_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	1.1e-23	31.2

DBSCAN-SWA_118

1294676 : 1298274

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004434512.1\|1294676_1295417_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-16	28.8
WP_013850579.1\|1295821_1296811_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_095919530.1\|1296876_1298274_-	endo-1,3-1,4-beta-glycanase ExsH	A0A0F6SIL6	Sinorhizobium_phage	2.4e-18	29.6

DBSCAN-SWA_119

1304618 : 1310989

Streptococcus_virus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013850574.1\|1304618_1305356_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	5.9e-40	42.0
WP_003528526.1\|1305352_1305709_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_014530343.1\|1305708_1306419_-	7-cyano-7-deazaguanine synthase QueC	A0A2P1JXV3	Rhodococcus_phage	6.4e-52	49.8
WP_014530342.1\|1306563_1308378_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-30	26.9
WP_014530340.1\|1308909_1309896_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	8.1e-53	36.7
WP_013850573.1\|1309981_1310989_-	exopolysaccharide production protein ExoZ	A0A2H4JA46	uncultured_Caudovirales_phage	1.2e-19	32.1

DBSCAN-SWA_120

1328182 : 1331503

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975921.1\|1328182_1329088_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	5.9e-58	42.0
WP_014530322.1\|1329142_1331503_+	succinoglycan biosynthesis transport protein ExoP	A0A1X9I5D6	Streptococcus_phage	8.8e-13	32.3

DBSCAN-SWA_121

1342875 : 1344051

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014530316.1\|1342875_1344051_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	2.6e-21	30.9

DBSCAN-SWA_122

1347196 : 1347865

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010975933.1\|1347196_1347865_-	SDR family oxidoreductase	Q56AQ6	Bacillus_thuringiensis_phage	1.5e-10	34.6

DBSCAN-SWA_123

1363282 : 1364062

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_028005571.1\|1363282_1364062_-	slipin family protein	A0A2K9L3T4	Tupanvirus	2.8e-24	29.5

DBSCAN-SWA_124

1384479 : 1389301

Acinetobacter_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919558.1\|1384479_1385256_+	3-hydroxybutyrate dehydrogenase	W8CYX9	Bacillus_phage	6.9e-07	37.8
WP_095919560.1\|1385299_1386787_+	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	1.3e-83	40.4
WP_095919562.1\|1386964_1389301_+	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	8.8e-207	51.0

DBSCAN-SWA_125

1396563 : 1397394

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919571.1\|1396563_1397394_+	alpha/beta hydrolase	A0A249XTE1	Mycobacterium_phage	1.7e-11	27.3

DBSCAN-SWA_126

1409482 : 1410232

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919579.1\|1409482_1410232_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	1.7e-18	31.5

DBSCAN-SWA_127

1417549 : 1419064

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095926575.1\|1417549_1419064_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.9e-57	35.4

DBSCAN-SWA_128

1432589 : 1434125

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003535529.1\|1432589_1434125_-	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-17	25.2

DBSCAN-SWA_129

1439120 : 1441055

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095926577.1\|1439120_1441055_-	diguanylate cyclase	G3MA91	Bacillus_virus	1.4e-16	36.0

DBSCAN-SWA_130

1445504 : 1448876

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003535549.1\|1445504_1446290_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-20	30.2
WP_157749817.1\|1448087_1448513_+	hypothetical protein	NA	NA	NA	NA
WP_080590425.1\|1448672_1448876_-	hypothetical protein	A0A076GD42	Sinorhizobium_phage	1.8e-07	61.4

DBSCAN-SWA_131

1455598 : 1456483

Mycobacterium_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010976056.1\|1455598_1456483_+	Ku protein	G1D488	Mycobacterium_virus	5.4e-16	28.2

DBSCAN-SWA_132

1462718 : 1467474

Pandoravirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919609.1\|1462718_1464158_-	FAD-binding oxidoreductase	S4VXI2	Pandoravirus	8.2e-38	28.8
WP_010976066.1\|1464400_1465168_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_010976067.1\|1465164_1466235_+	CDP-glucose 4,6-dehydratase	J7Q7J8	Aeropyrum_coil-shaped_virus	4.3e-15	30.0
WP_010976068.1\|1466241_1467474_+	class I SAM-dependent methyltransferase	A0A1V0SJ68	Klosneuvirus	1.4e-30	29.6

DBSCAN-SWA_133

1471188 : 1472685

Cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919613.1\|1471188_1472685_+	sugar ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	7.8e-07	27.9

DBSCAN-SWA_134

1477746 : 1479072

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015242878.1\|1477746_1478286_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.2e-23	36.9
WP_010976078.1\|1478310_1479072_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	6.3e-13	30.2

DBSCAN-SWA_135

1489496 : 1493005

Macacine_betaherpesvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010976090.1\|1489496_1489937_-	CBS domain-containing protein	A0A2I6B2H4	Macacine_betaherpesvirus	2.9e-18	43.9
WP_017267162.1\|1490011_1490311_-	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_080590474.1\|1490405_1490723_-	hypothetical protein	NA	NA	NA	NA
WP_017267161.1\|1490740_1491484_+	BON domain-containing protein	NA	NA	NA	NA
WP_017273266.1\|1491862_1493005_-	DNA topoisomerase IB	A0A0U2TSJ7	Niemeyer_virus	5.4e-32	30.8

DBSCAN-SWA_136

1497128 : 1497770

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527845.1\|1497128_1497770_+	UdgX family uracil-DNA binding protein	A0A2I6PIA1	Pseudomonas_phage	2.9e-19	37.6

DBSCAN-SWA_137

1504482 : 1505595

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017266928.1\|1504482_1505595_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-25	33.3

DBSCAN-SWA_138

1511695 : 1520429

Bacillus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095919623.1\|1511695_1513444_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	9.1e-23	37.2
WP_017266930.1\|1513700_1514045_-	hypothetical protein	NA	NA	NA	NA
WP_013850418.1\|1514251_1515349_-	DUF475 domain-containing protein	A0A172Q0Y5	Acinetobacter_phage	1.5e-60	43.4
WP_080590454.1\|1515445_1515955_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_003526277.1\|1516064_1516346_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_010976116.1\|1516323_1516572_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_080591180.1\|1516615_1517155_+	iron permease	Q19XG2	Mycobacterium_phage	8.2e-07	34.6
WP_010976118.1\|1517195_1517630_+	hypothetical protein	NA	NA	NA	NA
WP_010976119.1\|1517626_1518409_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.8e-10	27.0
WP_010976120.1\|1518726_1518930_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_014530204.1\|1518929_1519277_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_095926580.1\|1519229_1520429_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.8e-28	30.2

DBSCAN-SWA_139

1523648 : 1524170

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010976130.1\|1523648_1524170_+	sigma-70 family RNA polymerase sigma factor	A0A076YQ50	Rhizobium_phage	2.2e-09	30.5

DBSCAN-SWA_140

1533824 : 1534892

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014527819.1\|1533824_1534892_+	ornithine cyclodeaminase	A0A1V0SL93	Klosneuvirus	9.9e-89	49.7

DBSCAN-SWA_141

1568104 : 1572911

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014530175.1\|1568104_1569109_-	NAD(+) synthase	A0A0K0KVL1	Prochlorococcus_phage	2.3e-10	26.9
WP_014530174.1\|1569105_1570653_-	acyl--CoA ligase	A0A2K9KZV5	Tupanvirus	3.1e-22	24.6
WP_010976177.1\|1570680_1570947_-	acyl carrier protein	NA	NA	NA	NA
WP_095919642.1\|1570973_1572911_-	asparagine synthase (glutamine-hydrolyzing)	F2Y2L7	Organic_Lake_phycodnavirus	9.7e-26	28.5

DBSCAN-SWA_142

1579897 : 1581823

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014530166.1\|1579897_1580962_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	4.5e-25	33.0
WP_014530165.1\|1581046_1581823_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	7.6e-06	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP019483

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019483_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019483_1

320232-320341

Orphan

Consensus_repeat	Method
TCATCCCGGCGGTCCCGCCGCGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019483_1

>merge|NZ_CP019483|1|320232-320341|CRISPRCasFinder
TCATCCCGGCGGTCCCGCCGCGCGGCGATCAGGTCCATGAGCCGCTCGCGCCGGTCGCCGCGGTCGCCGATCAGTTCCATCAGGTCATCACGGCGGTCCCGCCGCGCGGC

>NZ_CP019483|1|1|320232-320341|CRISPRCasFinder
TCATCCCGGCGGTCCCGCCGCGCGGC	GATCAGGTCCATGAGCCGCTCGCGCCGGTCGCCGCGGTCGCCGATCAGTTCCATCAGG
TCATCACGGCGGTCCCGCCGCGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019483.1\|WP_010967341.1\|324217_324853_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236494
NZ_CP019483.1\|WP_010967330.1\|315645_316050_+\|BA14K-family-protein	unknown	unknown	gnl\|CDD\|369573
NZ_CP019483.1\|WP_088194909.1\|327176_328322_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|182881
NZ_CP019483.1\|WP_010967329.1\|314985_315243_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_095926476.1\|330650_331496_+\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
NZ_CP019483.1\|WP_015242499.1\|323680_324160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_088194663.1\|329310_330540_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP019483.1\|WP_095918786.1\|318875_319163_+\|DUF1612-domain-containing-protein	unknown	unknown	gnl\|CDD\|336802
NZ_CP019483.1\|WP_088194664.1\|328818_329307_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_041169963.1\|319260_319461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288799
NZ_CP019483.1\|WP_095918778.1\|313490_314162_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341362
NZ_CP019483.1\|WP_095918774.1\|310143_311715_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|223740
NZ_CP019483.1\|WP_041169964.1\|319501_319849_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_095918790.1\|325377_327135_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227903
NZ_CP019483.1\|WP_095918798.1\|332332_333478_-\|calcium/proton-exchanger	unknown	unknown	gnl\|CDD\|223464
NZ_CP019483.1\|WP_095918776.1\|312406_312793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_095918780.1\|314155_314479_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_095926475.1\|318443_318794_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_095918788.1\|324967_325237_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019483.1\|WP_095926477.1\|331658_332336_-\|VIT-family-protein	unknown	unknown	gnl\|CDD\|376705

Protein	Function_ID	Function_description	E-value
NZ_CP019483.1\|WP_010967341.1\|324217_324853_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236494	PRK09391, fixK, transcriptional regulator FixK; Provisional.	7.98396e-108
NZ_CP019483.1\|WP_010967330.1\|315645_316050_+\|BA14K-family-protein	gnl\|CDD\|369573	pfam07886, BA14K, BA14K-like protein. The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus and by Brucella suis. BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process.	8.86752e-10
NZ_CP019483.1\|WP_088194909.1\|327176_328322_-\|AI-2E-family-transporter	gnl\|CDD\|182881	PRK10983, PRK10983, AI-2E family transporter YdiK.	1.04982e-43
NZ_CP019483.1\|WP_095926476.1\|330650_331496_+\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	3.91622e-143
NZ_CP019483.1\|WP_088194663.1\|329310_330540_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	1.56393e-69
NZ_CP019483.1\|WP_095918786.1\|318875_319163_+\|DUF1612-domain-containing-protein	gnl\|CDD\|336802	pfam07756, DUF1612, Protein of unknown function (DUF1612). This family includes sequences of largely unknown function but which share a number of features in common. They are expressed by bacterial species, and in many cases these bacteria are known to associate symbiotically with plants. Moreover, the majority are coded for by plasmids, which in many cases are known to confer on the organism the ability to interact symbiotically with leguminous plants. An example of such a plasmid is NGR234, which encodes Y4CF, a protein of unknown function that is a member of this family. Other members of this family are expressed by organisms with a documented genomic similarity to plant symbionts.	4.98576e-36
NZ_CP019483.1\|WP_041169963.1\|319260_319461_+\|hypothetical-protein	gnl\|CDD\|288799	pfam11972, HTH_13, HTH DNA binding domain. This is a helix-turn-helix DNA binding domain.	2.08501e-15
NZ_CP019483.1\|WP_095918778.1\|313490_314162_+\|CBS-domain-containing-protein	gnl\|CDD\|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.27807e-53
NZ_CP019483.1\|WP_095918774.1\|310143_311715_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	7.61359e-49
NZ_CP019483.1\|WP_095918790.1\|325377_327135_+\|hypothetical-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	1.34111e-51
NZ_CP019483.1\|WP_095918798.1\|332332_333478_-\|calcium/proton-exchanger	gnl\|CDD\|223464	COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism].	8.18896e-101
NZ_CP019483.1\|WP_095926477.1\|331658_332336_-\|VIT-family-protein	gnl\|CDD\|376705	pfam01988, VIT1, VIT family. This family includes the vacuolar Fe2+/Mn2+ uptake transporter, Ccc1 and the vacuolar iron transporter VIT1.	0.000957073

>NZ_CP019483.1|WP_041169964.1|319501_319849_-|hypothetical-protein
MNKFLLMTAGLLLMPLPALSQSAPDSGSRDPGSIQDREIEDLLRSITDEVSGGSGGPRRGAAFLLRSGDATVAVRCDPRESMKDCVDLTTSLLEKARSAMPTGGGAPGTAPPPRP
>NZ_CP019483.1|WP_041169963.1|319260_319461_+|hypothetical-protein
MPELVDLVMARPLVSASMVAKTLDVTPQAARRIVLELGLREIALVTVDDAASLVLRIVNTLQECFR
>NZ_CP019483.1|WP_095918786.1|318875_319163_+|DUF1612-domain-containing-protein
MDEDARLEEWRGVLRQAHDLPPVLQAIVALDAWNVLSVLQHAPWLGRVLAASILRQAGVTASAHLAAVNLGLETMPVERRRHRDRNFQLLALPMG
>NZ_CP019483.1|WP_095926475.1|318443_318794_+|hypothetical-protein
MQNDIGGELVHLEDLVLDDATKNVRTPTHELTIAPDVLKSRRRINTQPPGLSAAGLRSLRGRDFVSGSPAASSAADGTVEVTTDPDVDRSTEGGDESNGDVSVFGAEFVAIDAVLA
>NZ_CP019483.1|WP_010967330.1|315645_316050_+|BA14K-family-protein
MKAPTLAFAVLASAIGMSPAKAQTCIGICNGGTGGTTNHNLFIEREYRDFLQQRYPNYGSRYRGMRPDISIGPGATVGGPRVGVRQQFRLRQRMVIDANKHLRWCQERYLSYRLADDTFQPFEGARRPCNSPYN
>NZ_CP019483.1|WP_010967329.1|314985_315243_+|hypothetical-protein
MTAAPVTEKSRYRSRPPSLYAPWWKSKEVITPSVIGGGASLLTVIGGIPWQNLLLILVAFGAIAGFLYWRKNADRRAVARVEGMA
>NZ_CP019483.1|WP_095918780.1|314155_314479_-|hypothetical-protein
MATGAGHGTRGPKGVRVDPTTALPTEAEVLARLDRIRFSTEFDAPGRARQFLAYVVRETTAGRADRIRAYSIATEVFGRDSSFDAQTDAAVRIEGVAEKWFCERQRY
>NZ_CP019483.1|WP_095918778.1|313490_314162_+|CBS-domain-containing-protein
MHVKDVMTAKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSEASVLMADMAIDPDDRANAFIRRCSWRVGDVMTANPVTIEEEAPLARVAGLMQERGIKRIPVVRDGELGGIVSRADLLQAIFSTKPDETAAGDEAIRRSILVRLGENTSLEELDVTVTVTEGIVHFWGQVETAGCRRAARIMAESVHGVRGIVEHFPDPYTQ
>NZ_CP019483.1|WP_095918776.1|312406_312793_-|hypothetical-protein
MGTPVLDQVGFEMIVYVAEISGRGIAAFDAANDIEAQAQLANRGLLRDLIVLQNEGRALWDGVAEIHVRTATPEETEIWQTSRTAAVQSGEDSDDEGRHVFLVPVVDPSHDNFDDDDNPHHDDDRDGD
>NZ_CP019483.1|WP_095918774.1|310143_311715_-|mechanosensitive-ion-channel-family-protein
MASVGSFLAFEWPPLLRKIILALLLAVIVFRVVRAIGKLLFALSGASGIADQPSSAFESDAARRFWLWRISIIAGFLLFGWAIVSLMPALSFSNEVTRLAAFLFGLGILVTAVEVVWRRPDKPASLVIKSLLSLYLVVLWSAWVAGLLGLLWLGIYSLLLPPLVRGVGDVAQALATRAQRTGPPGIVLSVVIVRGARAAVIAAAVAWLAYIWRIRAAALAGSEPGAIVIPGLLNGIIALLVADLLWQMSKALIAYRMGLGPKDGSNVDELARSGRLRTLLPIFRNVLAVFIGAVTVLTILSGLGVQIAPLIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLDDAFRVGEYIQSGSYKGTVESFSLRSVRLRHHRGPIFTVPFGELGAVQNMSRDWVIDKMTLNVTYDADVDLARKLIKKVGQELAADPEFAADTIEPLKMQGVDSFGDFAIVLRMKLMTKPGAQFTIKRRAFMMIKKAFDENGIKIAVPTVHVSGGSDNAAAAQQVLNMRKAAELAANKAPVAP
>NZ_CP019483.1|WP_015242499.1|323680_324160_+|hypothetical-protein
MRATWAIPVAALVLLLDSSDGTAGQPGKSADQPSKYVPSVGEIMNKIDLSRSKLWYSVKLRNWALAGYQLDQVKTGFDDVSRHHPDKSNFDFANAQKIANLIEEAIVARSDEQFQQSFALMTTECNDCHRAVGKPFLHVGAPKIPSPYSDKMLEPGAFR
>NZ_CP019483.1|WP_010967341.1|324217_324853_-|helix-turn-helix-domain-containing-protein
MNTSISASWGRYINAIPPRSGEAALAPLSSFVDGQCIYSFGERADQVYQVEFGAVRVYRLAANGRRQILAFHFGGNWFGLQSRDRHSSNAEAIGVTGVRCISLQEEPLFRPALFSAALDNVSAAQEHQLVIGRQSAIERVAAFLLEMSERSGYSRRFELSMSRVDVADYLALTVETVSRSLTKLKHRGFIELHGARGIELVGYRALQNLCL
>NZ_CP019483.1|WP_095918788.1|324967_325237_-|hypothetical-protein
MNGEPDWKHCMAAALRRFPARSLQIRELSMRDEDFRGICEDFAAAENALAAVDQLPLHIREERRAEFKGLIESLAAEIAIALGPADGSI
>NZ_CP019483.1|WP_095918790.1|325377_327135_+|hypothetical-protein
MTIADRGSVRAGSPTALPTNTEILSQLDRIRLSAEFDVPDRARKFLAYIVGEAIAGRADRIKAYSIATEVFGRDSSFDAQTDPVVRIEAGRIRRALERYYFVAGSNDPIVIKIPKGGYAPAFEKRDGAPYQLSSGQAANVQSRSMPLEQTALWVSVATVGLLTCGLLANAFFGSAATTIESLTKPGGTRPSIPKLMVMPFEDLSQTPQSAMITRGLTDEVISNIAKFKEIVVVAGPAAPNPHIAEREYPAFALEGRVRLDGDKLRLGIRLVQHSDGSVVWANTYDEVLQPRKIIELQQNAAAAVASAIAQPYGIVFQANATHFMRSVPDDWQAYACTLAYYGYRGDLNPQTHATVQECLQQATTQFPDYATAWALLSLTYVDELRFRYRLHRSTTVSLAHAIEAAARAVELDPQNVRALQAEMLTLFFRGEVNAALTVGARAYAINPNDTELSGEYGFRLALSGQWRSGCDLVSKTVASNPGPVGYFEAALAVCRYIEHDYVAAERWARSADLHANPIYHVILLAILGKLGKMDLARTEREWLETNVPGFLENARNEVALRIHRPEDQQHFIEGLRQAGVSIPGK
>NZ_CP019483.1|WP_088194909.1|327176_328322_-|AI-2E-family-transporter
MDDNPSSQRNPDPVNPAARPSIEPRITEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGHRPRVAALVITMLGLLVIVAPLAAIAISFAEGIQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWSMASDNLEAVLQQIKPSLLQAGSKALGKIASIGADLLSFVVSVLVAGFLFGSGARLANSAQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCVLILSLFKVPAPGAIAFVVLILCIIQIGPALVLLPVIVWAWTSMEFGMAALFTILLIPLLIIDNVMKPILVARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHSLLLIWMNTDTVGSEGLRLGASRLPNPT
>NZ_CP019483.1|WP_088194664.1|328818_329307_+|hypothetical-protein
MEDSLHPAAVAHLPPFITAPGQTDVLFNVMIVFVLLMIFVVGILYLRLHALPEHMAHGASKVQLQIVGVLALIALFTHNHLFWIAALLLAMVEFPNFSSPVESIARSLAKMADRHDGTDEPGTSAQPAAMPPRANESHASPPQWVPLEIEAVAGDDKAERRG
>NZ_CP019483.1|WP_088194663.1|329310_330540_+|HlyD-family-secretion-protein
MLEFLICSLLTIFPDYLVRRYVQGKRVGREINLYSMWFELRYGITACLILTISLITMIFYFHPSTSNVTAVFRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDDSEQQAALETARRRVAEIEAEAIVAQSELASADGLIAQAEGDYLQALNELETQVELNQRNPNIVARREIERLQVAVDGRDGARAASISNKRTLETKIASLLPAQKASAEAALTQAQVELDKTIVRAGTAGVVQQFALRAGDIVNPMIRSAGILVPEQRRIGLIAGFGQIEAQVMKAGMIAEATCIGKPFTIIPMVVTEVQDVIAAGQIRPTDQLVDAQQLASPGTLTAYLEPLYEGQFSGVPPGSSCIANAYTSNHDALHAPGISTPHWLFLHVVDAVGLVHAMILRLQALLLPVQTLVFKGH
>NZ_CP019483.1|WP_095926476.1|330650_331496_+|polyphosphate-kinase-2
MDKHTDDRKKNKAEDRKSAATEASETRSGGNYAKELARLQEEIAHLQAWVKKTGARIVIVFEGRDAAGKGGVIKRITERVSPRVFRVVALPAPTDREKTQIYMQRYIQQFPAAGEVVIFDRSWYNRPGVERVMGFCSEKKAKRFLEIAPRFEAAMIESGIVLLKYFLDVSEEEQDRRFRQRINDPLRQWKLSPMDVESYRRWWDYTRAYDEMIRMTDTDDAPWWIVPSDNKKQARVNCIAHILSSIPYEPVKFEEPDLGKRQKRPADFEGDTRRRTVPNLF
>NZ_CP019483.1|WP_095926477.1|331658_332336_-|VIT-family-protein
MSEKVPGNGGSKHLFYGVLNPVDRSNEVLFGLIMVMTFTNSLSTTDAGRADVRSMLVGAVGCNLAWGIIDAVMYFMSSMAERKLSERTVHRVRSADDVKAARGIVAEALPGIILPALSSEDLERIRRHLASLPDDEVRARPTTRDVISALGVFLLVFFCTFPVVFPFIVMTNALAAVKVSNAIATALLFLAGYTLGRHSGNPVGLALAMVAIGLILVALASALGG
>NZ_CP019483.1|WP_095918798.1|332332_333478_-|calcium/proton-exchanger
MRTFEVKRSTKQSRSAIETLLRELRRSPLLALIFFVPVVILLERMAPKAHTLLFFMAIAAIVPLAALLSRATESVAAKTGDAVGGLLNATLGNLTELIITLAALQAGQYLLVKASIAGAIVTNSLFMFGGAFLIGGLKHHLQEFNRVNARFQASLLFLATIAILVPSLTSGLDRTPAAEFSQQLSLGLAILLIAVYGLGMVFSLKTHKELFASVGQAEAGEEPWPLSIGIVVLIVVTLLVAMVSEIFVGSVQAAAQHLGLTPAFVGFIVIALVGGAAEMTTAFSAARANRLDLSVGIALGSAAQIALFVAPVLVLVSYFIGPQPMSLEFWPGAVAMMLVATMAATLLSNGGHAAWYAGVMALAVYAIFALTLFLLPPGVTQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	709941-709998	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	618048-618105	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	534472-534529	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	320258-320315	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	295298-295355	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1180665-1180722	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1086301-1086358	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1186250-1186307	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	275823-275880	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	7342-7399	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	819905-819962	0	1.0
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	347456-347513	1	0.983
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	403311-403368	1	0.983
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	347117-347174	1	0.983
NZ_CP019483_1	1.1\|320258\|58\|NZ_CP019483\|CRISPRCasFinder	320258-320315	58	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	373772-373829	1	0.983

1. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

2. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

3. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

4. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

5. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

6. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

7. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

8. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

9. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

10. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

11. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

12. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

13. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcaccgcggtcgccgatcagttccatcagg	Protospacer
******************************.***************************

14. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

15. spacer 1.1|320258|58|NZ_CP019483|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

366741 : 375072

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_127523077.1\|366741_367110_+	DUF4055 domain-containing protein	A0A0A0RTF5	Escherichia_phage	9.5e-07	32.2
WP_014989928.1\|367124_367397_+	hypothetical protein	NA	NA	NA	NA
WP_003535606.1\|367661_367865_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.1e-07	51.7
WP_013851090.1\|367965_368394_-	hypothetical protein	NA	NA	NA	NA
WP_080599838.1\|369195_369636_-	hypothetical protein	NA	NA	NA	NA
WP_010967384.1\|370055_371693_-	chaperonin GroEL	A0A219YK78	uncultured_virus	2.5e-176	63.1
WP_014528059.1\|371768_372065_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.4e-21	57.6
WP_127570311.1\|372283_372592_+	hypothetical protein	NA	NA	NA	NA
WP_080599839.1\|372620_372782_+	hypothetical protein	NA	NA	NA	NA
WP_014989935.1\|373152_373602_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	8.6e-18	47.5
WP_095926478.1\|374193_375072_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	8.6e-22	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019485

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019484

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP019483

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection