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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021246 Taylorella equigenitalis strain 98-0554 chromosome, complete genome 2 crisprs cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh 0 3 5 1

Results visualization

1. NZ_CP021246
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021246_1 204493-206185 TypeI NA
25 spacers
cas3,cas2,cas1,cas4,cas7,cas8c,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021246_2 1193780-1194067 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP021246_1 1.18|205656|34|NZ_CP021246|CRISPRCasFinder,CRT,PILER-CR 205656-205689 34 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 288796-288829 7 0.794
NZ_CP021246_1 1.18|205656|34|NZ_CP021246|CRISPRCasFinder,CRT,PILER-CR 205656-205689 34 NZ_CP012100 Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence 342046-342079 8 0.765
NZ_CP021246_1 1.18|205656|34|NZ_CP021246|CRISPRCasFinder,CRT,PILER-CR 205656-205689 34 NZ_CP029455 Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence 153352-153385 8 0.765
NZ_CP021246_1 1.4|204724|34|NZ_CP021246|CRISPRCasFinder,CRT 204724-204757 34 MF403008 Agrobacterium phage Atu_ph07, complete genome 266155-266188 9 0.735
NZ_CP021246_1 1.28|204725|33|NZ_CP021246|PILER-CR 204725-204757 33 MF403008 Agrobacterium phage Atu_ph07, complete genome 266155-266187 9 0.727

1. spacer 1.18|205656|34|NZ_CP021246|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 7, identity: 0.794

atattattttcaactaacaagtttt---taatctcag	CRISPR spacer
atattcatttcaactaacaagttttctataaatt---	Protospacer
*****  ******************   *** .*   

2. spacer 1.18|205656|34|NZ_CP021246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 8, identity: 0.765

atattattttcaactaacaagttttt----aatctcag	CRISPR spacer
atattcatttcaactaacaagttttctatgaatt----	Protospacer
*****  ******************.    ***.    

3. spacer 1.18|205656|34|NZ_CP021246|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 8, identity: 0.765

atattattttcaactaacaagtttttaatctcag	CRISPR spacer
atattcatttcaactaacaagttttctatgaatg	Protospacer
*****  ******************. **    *

4. spacer 1.4|204724|34|NZ_CP021246|CRISPRCasFinder,CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 9, identity: 0.735

ccaattagtgctttttctattcgatgttttttac	CRISPR spacer
ccaattaatgatttttctattcgatcacctgtga	Protospacer
*******.** **************  ..* *. 

5. spacer 1.28|204725|33|NZ_CP021246|PILER-CR matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 9, identity: 0.727

caattagtgctttttctattcgatgttttttac	CRISPR spacer
caattaatgatttttctattcgatcacctgtga	Protospacer
******.** **************  ..* *. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 229564 : 237425 11 Synechococcus_phage(28.57%) NA NA
DBSCAN-SWA_2 244123 : 251700 9 uncultured_marine_virus(16.67%) NA NA
DBSCAN-SWA_3 312575 : 323660 9 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_4 994057 : 1000903 7 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_5 1102278 : 1114170 9 Bodo_saltans_virus(16.67%) tRNA NA
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP021246.1|WP_013521353.1|1209915_1210356_+|hypothetical-protein 1209915_1210356_+ 146 aa aa 86 HTH_XRE NA No NA