CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023148	Mycobacterium marseillense strain FLAC0026 plasmid pFLAC0026, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP023147	Mycobacterium marseillense strain FLAC0026 chromosome, complete genome	5 crisprs	DEDDh,cas3,csa3,DinG,WYL	2	4	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023147_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023147_1

424190-424269

Unclear

Consensus_repeat	Method
GCGGGTCGCCGCCATCGGGCTAGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023147_1

>merge|NZ_CP023147|1|424190-424269|CRISPRCasFinder
GCGGGTCGCCGCCATCGGGCTAGTGGCGATCGCAAGCGCGGCGAAGCCGGGCGCCGCGGGTCGCCACCATCGGGCTAGTG

>NZ_CP023147|1|1|424190-424269|CRISPRCasFinder
GCGGGTCGCCGCCATCGGGCTAGTG	GCGATCGCAAGCGCGGCGAAGCCGGGCGCC
GCGGGTCGCCACCATCGGGCTAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023147.1\|WP_095576426.1\|424869_426255_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|200042
NZ_CP023147.1\|WP_083019068.1\|411986_414800_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236048
NZ_CP023147.1\|WP_095576428.1\|430146_430950_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP023147.1\|WP_067172165.1\|411192_411783_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_095576423.1\|417943_419683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_083019064.1\|421748_423002_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225153
NZ_CP023147.1\|WP_095576422.1\|414796_416458_-\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP023147.1\|WP_067172139.1\|428289_428901_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP023147.1\|WP_083019058.1\|429754_430015_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_095576431.1\|433720_434908_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225052
NZ_CP023147.1\|WP_095578084.1\|419726_420671_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566
NZ_CP023147.1\|WP_095576429.1\|431096_432674_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|367155
NZ_CP023147.1\|WP_067172153.1\|421005_421704_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP023147.1\|WP_007772268.1\|410815_411019_+\|cold-shock-protein-CspA	unknown	unknown	gnl\|CDD\|224197
NZ_CP023147.1\|WP_095576430.1\|432707_433721_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176223
NZ_CP023147.1\|WP_067172143.1\|426251_427298_+\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|274833
NZ_CP023147.1\|WP_095576427.1\|428961_429705_-\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP023147.1\|WP_095578083.1\|416556_417789_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236134
NZ_CP023147.1\|WP_083019062.1\|427276_428239_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP023147.1\|WP_095576424.1\|420667_421009_-\|DUF2304-domain-containing-protein	unknown	unknown	gnl\|CDD\|378376

Protein	Function_ID	Function_description	E-value
NZ_CP023147.1\|WP_095576426.1\|424869_426255_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|200042	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family. In E. coli, this protein is known as penicillin binding protein 4 (dacB). A signal sequence is cleaved from a precursor form. The protein is described as periplasmic in E. coli (Gram-negative) and extracellular in Actinomadura R39 (Gram-positive). Unlike some other proteins with similar activity, it does not form transpeptidation. It is not essential for viability. This family is related to class A beta-lactamases. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	2.13526e-115
NZ_CP023147.1\|WP_083019068.1\|411986_414800_+\|type-I-DNA-topoisomerase	gnl\|CDD\|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0
NZ_CP023147.1\|WP_095576428.1\|430146_430950_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	1.64004e-40
NZ_CP023147.1\|WP_095576422.1\|414796_416458_-\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	8.92969e-46
NZ_CP023147.1\|WP_083019064.1\|421748_423002_-\|hypothetical-protein	gnl\|CDD\|225153	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].	0.00144164
NZ_CP023147.1\|WP_067172139.1\|428289_428901_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	6.69038e-93
NZ_CP023147.1\|WP_095576431.1\|433720_434908_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|225052	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion].	1.75119e-49
NZ_CP023147.1\|WP_095578084.1\|419726_420671_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.73217e-119
NZ_CP023147.1\|WP_095576429.1\|431096_432674_-\|HNH-endonuclease	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	2.52362e-70
NZ_CP023147.1\|WP_067172153.1\|421005_421704_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	2.11021e-49
NZ_CP023147.1\|WP_007772268.1\|410815_411019_+\|cold-shock-protein-CspA	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.2582e-35
NZ_CP023147.1\|WP_095576430.1\|432707_433721_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176223	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	4.8194e-157
NZ_CP023147.1\|WP_067172143.1\|426251_427298_+\|zinc-dependent-metalloprotease	gnl\|CDD\|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	2.22378e-148
NZ_CP023147.1\|WP_095576427.1\|428961_429705_-\|SIMPL-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	1.85995e-56
NZ_CP023147.1\|WP_095578083.1\|416556_417789_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	0
NZ_CP023147.1\|WP_083019062.1\|427276_428239_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	6.40422e-54
NZ_CP023147.1\|WP_095576424.1\|420667_421009_-\|DUF2304-domain-containing-protein	gnl\|CDD\|378376	pfam10066, DUF2304, Uncharacterized conserved protein (DUF2304). Members of this family of hypothetical archaeal proteins have no known function.	2.4225e-25

>NZ_CP023147.1|WP_083019064.1|421748_423002_-|hypothetical-protein
MTEISASQGPVARGSMARVGTATAVTALCGYGVIYLAARDLAPSGFSVFGVFWGAFGLVSGAAFGLLQETTREVRACSVGGPYLEVAPTKRTHPLRVAALIGVAAAVVIAGTAPLWSGRVFVESRWLSVALLCAGLAGFCVHTTLLGMLAGINQWTQYGALMVTDAVIRVAIAAATVVLGWHLTGFLWATVGGAIAWLILLVASPATRAAARLLTPGGTATFLRGAAHSITAAGASAILVMGFPVLLKLTSAELGAEGGVIILAVTLTRAPLLVPLTAMQGNLIAHFVDQRSDRLRALIAPAGIVAGIGAVGVAAAGAVGPWLLRIAFGPQYQASSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVASGLLLLLPLSLQTRTVVGLLCGPLVGIGVHLVALSRATR
>NZ_CP023147.1|WP_067172153.1|421005_421704_-|glycosyltransferase-family-2-protein
MGTETHYSVVWVVIPAFNEAAVIAEVIADVRSVFDHVVCVDDGSADGTGEIARRAGAHLVRHPINLGQGAAIQTGVEYARKQPGAEVFATFDADGQHRVKDLAAMVDRLRAGDVDVVIGTRFGTQQVARPPLLKRIVLQTAARLSRRGRRLGLTDTNNGLRVFNKKVADGLDITMSGMSHANEFVMLIDENHWRVTEEPIEVLYTDYSKSKGQPLLNGVNIIFDGFLRGRTP
>NZ_CP023147.1|WP_095576424.1|420667_421009_-|DUF2304-domain-containing-protein
MNWIQVLLIGSIVALLIYLLRSRRNARSRAWVKVGYVVFVLAGIYAVLRPDDTTVVAQWFGVRRGTDLMLYALVMAFCFTTLSTYMRFKDLELRYARLARAIAMDSAQAPEAG
>NZ_CP023147.1|WP_095578084.1|419726_420671_+|NAD-dependent-epimerase/dehydratase-family-protein
MRALVTGAAGFIGSTLVDRLLADGHAVVGLDNFASGRASNLEHLADNPAHVFVEADIVTADLEAILDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVIGTVRLAEAARRAGVRKVVHTSSGGSIYGVPPRYPTPESVPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGGNTRDYVFVDDVVDAFVKASGDAGGGQRFNIGTGVETSDRQLHSAVAAAVGGPDDPEFAPPRLGDLKRSCLDIGSAAQVLGWRPKVELAEGVRRTVDYFRGTHAG
>NZ_CP023147.1|WP_095576423.1|417943_419683_-|hypothetical-protein
MQLAVRAALAFGGYFYWDDLILIGKAGTHNLLAPSYLFHDHDGHVMPGAFLLAGTIIRLAPLDWTWPALSLVVLQLLASLTLLRALHVIGGWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAVLLVRTGNPRYAVTGVLVYFGGLLFFEKAAVIPFVAFAVAALLCHVTGDVGLGSALATAWRAGARLWVAALALTAAWVALYLGVVNQQRWSSDLSMTGRLLVRSITHGIVPGLAGGPWHWDRWAPASPWATPPASAMALGWLVLGGALAVSLARKRRIGPVWLTAAGYAVACQVPIYLMRSSKQTALELAQTLRYFPDLVVVLALLAAVALCAPNRPAGPGWLDASPKRAAVTAGLATLFVASSLYSTATFLTSWRDNPAQPYLRNAQASLAAAHAASDAPLLDQEVDPLVLQRVAAPENLASHLFALLRDRPEFAPATTQLRMLDSSGHLIRARVTWIRTIAPGPMPQCGYFAQPDKPARLVLDGPLLPADWTVELNYLANSDGSMMLSMTQGPEVKVPVHPGLNRVFARLPGAGDAITVRANTAALALCIASGPVGFLAPA
>NZ_CP023147.1|WP_095578083.1|416556_417789_+|DNA-polymerase-III-subunit-delta'
MSGVFARLVGQDAVTAELLAAARASRGDPAHSEAGAGTMTHAWLITGPPGSGRSVAALCFAAALQCTSTVADGGPGCGRCHACTTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPATGHRQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHVALVTPSTEAIAHVLVDSDGLSAETADWAASVSGGHVGRARRLATDPEARARRERALGLVRDAATPSRAYAAAEELVAAAEAEAVVLTADRAEAETEELRTALGAGGTGKGTAGAMRGAAGAIKDLERRQKSRQTRASRDALDRALIDLATYFRDALLASANAGAVRANHPDMAEKVAALAAHAPPDRLLRCIEAVLECREALAINVKPKFAVDAMVATIGQELRAQEPRD
>NZ_CP023147.1|WP_095576422.1|414796_416458_-|adenylate/guanylate-cyclase-domain-containing-protein
MPRSLLSFRDVAAARYGGLVTTAAGLPGRISAFVRWVVRTPWPLFSLSMLQADIIGALFVLGFLRYGLPPQDRIQLQDLPTLNLAIFACSLVVLFLVGVVVNLKLLMPVFRWQRRDNMLAETDPAATELARSRALRMPYYRTLSTVVYWCIGGVVFIVASWSVAKFAAPVVTVATALGAAATAIIGYLQSERVLRPVAVAALRSGVPENVKAPGVILRQILTWMLSTAVPLMAIVLAVVADKASLLHAAPESLFNPILLLALTALGVGLISTLLVAMSIADPLRQLRWALSEVQRGNYNAHMQIYDASELGLLQAGFNDMVRDLSERQRLRDLFGRYVGEDVARRALERGTELGGQERDVAVLFVDLVGSTQLASTRPPAEVVHLLNEFFRVVVETVGRHGGFVNKFQGDAALAIFGAPIEHPDSPGGALAAARELHDELLPVIGSAEFGIGVSSGRAIAGHIGAQARFEYTVIGDPVNEAARLTELAKLEPGHVLASAIAVSGALDAEALCWDVGEVVELRGRRAPTQLARPVKLAALEEVAPQEVSSDARS
>NZ_CP023147.1|WP_083019068.1|411986_414800_+|type-I-DNA-topoisomerase
MADPKLKDSAGGGNGSRRRLVIVESPTKARKLAGYLGSSYIVESSRGHIRDLPRAAADVPAKFKSEPWARLGVNVDADFEPLYIISPEKKSTVSELKGLLKDVDELYLATDGDREGEAIAWHLLETLKPNIPVKRMVFHEITEPAILEAAENPRDLDIDLVDAQETRRILDRLYGYEVSPVLWKKVAPKLSAGRVQSVATRIIVQRERDRMAFRSASYWDIVAQLDASVSDPQASPPTFTARLSGVDGLRVAAGRDFDSLGQLRKADEVVILDEAQATELAAGLRGAQLSVASVEEKPYTRRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQSAINAARNQARQLYGEEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDEFRLYELIWQRTVASQMADARGTTLSLRIGGRSGERQVVFSASGRTITFAGFLKAYVETVDELAGGEADDAESRLPQLTQGQRLDAIALTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSIIKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDAIASGQERRTDWLNNFYFGGEHGVADSIARSGGLKKLVGVNLEGIDAREVNSIRLFDDDQGRPVYVRVGKNGPYLERMVTGEDGERTPQRANLNDSLTPDELTLELAEQLFATPQEGRVLGVDPATGHEIVAKDGRYGPYVAEILPEPPPGDDDGGAAPAKKGKKPTGPKPRTGSLLRTMDLQTVTLEDALRLLSLPRVVGVDPESGEEITAQNGRYGPYLKRGTDSRSLATEEQMFDITLEDALKIYAEPKRRGRQGAAAPPLRELGADPATGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERAAELLADRRARGPVKRPAKKAARKSPAKKSAAKKTAKRS
>NZ_CP023147.1|WP_067172165.1|411192_411783_+|hypothetical-protein
MSQLSFFTAESVPPAVTDLSGVLATSGQIVTVGGPEAHGARLSVVVDAPWRASALAEMIREAGLVAEIGRTDEDTPLVRTAVDPSLSTLAAEWTRGAVKTVPPRWLPGPRELRAWTLAAGNPEGEHYLLALDPHAPDTHSPLASALMRVGIAPTLIGTRGGRPALRITGRRRLSRLVENVGEPPDCAEALSRWPRV
>NZ_CP023147.1|WP_007772268.1|410815_411019_+|cold-shock-protein-CspA
MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQATGVRSL
>NZ_CP023147.1|WP_095576426.1|424869_426255_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MARTRWQKSTPVFIGLGVLAFVAAVVVAATFFTTTGHGAGSARAPIPPPHAPTVKPGMVPVSDSAELPSGPGVSAALAPVAGDPNLGRLGGRITDALTGKELWQVADDMPLVPASTNKVLTAAAALLTLDRQARISTRVVAGSQNAQGPVVLVGAGDPVLSAAPPGQDTWYRGAARISDLVEQIRRSGVTPTAVQVDTSAFSGQTMAQGWDPADVDNGDIAPIESVMIDAGRIQPTTVNSRRSRTPALDAGRELAKALNLDPAAVTIATAPSGARQLAVVQSAPLVQRLSEMMDHSDNVLAECIAREVAAAINRPRSFAGAADAVTNRLSTAHVDTAGAALLDSSGLSVDDRLTAKTLDGVLQAAAGPDQPALRALLDLLPIAAGSGTLGDRFMDASTSQGPAGWLRAKTGSLTNINALAGVLTDRSGRVLTFAFISNDAGPTGRNVMDALATKLWFCGCS
>NZ_CP023147.1|WP_067172143.1|426251_427298_+|zinc-dependent-metalloprotease
MTPSPELTLGTAVDWQFAATVGRRLARPGPPSSDYTRRQVFDELVGSAAKAEPLVRDVTGLVTGGAVPAARIVDRPEWIAAAAESMRVMMNGAEKPRGFLTGRITGAQTGAVLAYVSSGILGQYDPFAAAKAGCLLLVYPNVLAVERQLRIEPTDFRLWVCLHEVTHRVQFTANPWLPDYMSQALGLLTRDAGDDVGEVVSRLADYARNRGNAASDANSAGILGLVRAVQSEPQRQALDQLLVLGTLLEGHADHVMDAVGPMAVPSVATIRRRFDERRHRKQPPLQRLLRALLGLDAKLSQYTRGKAFVDHVVGQVGMARFNTIWTGPETLPLPIEIEEPQRWIDRVL
>NZ_CP023147.1|WP_083019062.1|427276_428239_+|tRNA-lysidine(34)-synthetase-TilS
MDRQGAVGRLRAAVEAFIKTHLAAVDQWCVALSGGPDSLALTAVAAQLRPTTAVVVDHGLQSHSADIAEAARAQAAALGCVAAQVIRVQVGTQGGPEAAARAARYAALAAYHDGPVLLGHTLDDQAETVLLGLGRGSGARSIAGMRPYDPPWCRPLLGVRRAVTHDACRELGLTAWRDPHNSDRRFTRARLRADVLPLLEDVLGGGVAEALARTATALREDGELIDALAARALPDAKAGPGLRVSALAPLEAPIRRRVIRAWLLTGGATGLTDKQIRAVDTLVTAWRGQGGVAVGSSVADERLFAGRRDGVLTLWREQVQ
>NZ_CP023147.1|WP_067172139.1|428289_428901_+|hypoxanthine-phosphoribosyltransferase
MVVAQISSAITPAQPAELYPGDIKSVLLTAEQIQARIAELGREIGENYRDAASQTGQDLLLITVLKGAVIFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIEGRDVLIVEDVVDSGLTLSWLLRNLKTRHPRSLGVCTLLRKPDAKGAHVDIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQQ
>NZ_CP023147.1|WP_095576427.1|428961_429705_-|SIMPL-domain-containing-protein
MPVATNASSFVRRSIALAAAGLTVAAASACDETSPSHPGANPRQVTVLGTGQVQGVPDTLTADVGIEFTAPDVTTAMNQTNDRQQAVINALLGAGVDRKDISTTEVTLAPQYTNPGPSGTADITGYRATNAVAVKIHPPDAASRLLALIVGTGGDATRIRSVRYSIADDSQLVKDARARAFNDAKSRAEQYAQLSGLRLGRVLSISEATGSPPPVGAPTPRAMPSMVPLEPGQQTVNFSVTAVWELD
>NZ_CP023147.1|WP_083019058.1|429754_430015_-|hypothetical-protein
MTHATRETHSGAIQLVALLVGFMAGPVATPALIWLSLVLELPLAVIIVLLIVMVLVSNWLSRIIIRIHELHRYGNRAHGVDQAAAH
>NZ_CP023147.1|WP_095576428.1|430146_430950_-|helix-turn-helix-domain-containing-protein
MAAKGSALAQFLRARRSLVRPADVGLPAGERRRVDGLRREEVAVLAGISTDYYLRLEQGRETNPSDQVLTSIARALRLDDDAVVYMRNLMRHRSAERTAPLQQVNPGIRDLLDGFDRAAAFVVDPGMTVVVANRVAEALSPHLRVGGNAVRELFLDPRSPELYRDWKLLTAWAVRLLRATYGQRPDPALINLVDELIEHSPRFRQLWDRHDVKHEVAGGLGVNHPEVGALRLNYQQLVLPGTGHVLVTYWADAGSPSEAGMLRLGAR
>NZ_CP023147.1|WP_095576429.1|431096_432674_-|HNH-endonuclease
MFDVPSDPAALVAEIESTHREESMLVARRLAAVAALLRHRVANSEQADQEYAAIDGFEQAAAEVAAAMNLSAMGASYLVSHAEALDTRLPRIAALLAEGRTDWRTVRLIITRTDLITDGELIAKIDQSLAARIGNWHGWSKQRIVNAVDAAVRVTDPDAVRERRLEAENERHIAITATDNGMAELNGSVAATAATAFDRRLSQLAKQVCPADPRTMDQRRADALAALAENRGLACACGQPECPTRGDDDKRDRSGAQVIVTVVASDQTVYADGAGPGYLEGYGVIDAEQVRQLAAAASLLVANPVTSPVEALRYQPSAALERAVRCRDLTCRFPGCSGPAMVCDLDHTVPFNHQDPAAGGRTVAENLKCLCRQHHRLKTFGGWCDRQLPDGTVIWTSPTGNTYRTSPAGADLFPQPRGPACAAPPPNRRSRSRQRSGRITQARKHNREQRPINAARRQLEQDRNDEIAARKFRNHMRDMLFLFKGTPSTSPFCTWVNDPREPEELPPDWAPDRPALQPLPDDPPF
>NZ_CP023147.1|WP_095576430.1|432707_433721_-|zinc-binding-dehydrogenase
MRASVLREGRMVYRDDVPEPVPEAGQVLVGVRACGICGSDLHFAAHGAQVLEMTARAAGGGGGMHVDLDHDIFMGHEFSAEILEAGPDTETHPPGTLVTSLPVLLSAKGVDPIVYSNSTIGGYAERMLLSAPLLLPIPNGLDFRHAALTEPMAVGLHAVNKSSITPGETALVLGCGPIGIAIVAALRSKGIETIVASDFSPKRRELATAMGAHQTLDPAQGSPFDSVKPAVVFEAVGVPGIIDDVMLRARPGTRLVVAGVCMQPDTVHPFFAIAKEINVQFVLAYTPDEFGDSLRALAEGDIDVSPLITGEVGLDAVGAAFDDLADPERHCKVLVTP
>NZ_CP023147.1|WP_095576431.1|433720_434908_-|LLM-class-flavin-dependent-oxidoreductase
MSAPLRFGVFITPFHPVGQSPTVALEYDMERVVALDRLGFDEAWFGEHHSGGYELIACPEVFIAAAAERTKHIRLGTGVVSLPYHHPLMVADRWVLLDHLTRGRVMFGTGPGALPSDAYMMGIDPVEQRRMMQESLEAILALFRAAPTERIDRHSDWFTLRDAQLHIRPYTWPYPEISTAAMISPSGPRLAGALGTSLLSLSMSVPGGYAALETTWDVVREQAAKVGRDEPDRGDWRVLSIMHIADSREQAIDDCIYGLQDFANYFGAAGFVPLANSVEGTQTPHEFVADYAAKGNCCIGTPEDAIAHIEDLLDRSGGFGTLLMLGHDWASPEATHRCYDLVARKVIPHFKRQLEASRASHEWAKGKRDQLIGRAGEAVVKAITEHVDEQKDAVH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023147_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023147_2

1859636-1859713

Orphan

Consensus_repeat	Method
CGCCGCGCTGGCGATCGCCACGG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP023147_2

>merge|NZ_CP023147|2|1859636-1859713|CRISPRCasFinder
CGCCGCGCTGGCGATCGCCACGGGGCTGATGGTGGCGACCCGCTGCGCCCGGCTACGCCGCGCTGGCGATCGCCACGG

>NZ_CP023147|2|2|1859636-1859713|CRISPRCasFinder
CGCCGCGCTGGCGATCGCCACGG	GGCTGATGGTGGCGACCCGCTGCGCCCGGCTA
CGCCGCGCTGGCGATCGCCACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023147.1\|WP_067170256.1\|1859241_1859520_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_083020475.1\|1855312_1856590_+\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
NZ_CP023147.1\|WP_095576913.1\|1860003_1860687_-\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
NZ_CP023147.1\|WP_095578165.1\|1849538_1850930_+\|glycine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235240
NZ_CP023147.1\|WP_095576911.1\|1851182_1852412_+\|PPE-family-protein	unknown	unknown	gnl\|CDD\|366325
NZ_CP023147.1\|WP_067170249.1\|1860689_1861622_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273463
NZ_CP023147.1\|WP_067170246.1\|1862119_1862923_-\|sulfotransferase	unknown	unknown	gnl\|CDD\|286169
NZ_CP023147.1\|WP_067170270.1\|1852978_1853200_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_067170239.1\|1868066_1868534_+\|LppP/LprE-family-lipoprotein	unknown	unknown	gnl\|CDD\|379436
NZ_CP023147.1\|WP_095576910.1\|1848929_1849331_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP023147.1\|WP_095578167.1\|1872274_1874644_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP023147.1\|WP_067170281.1\|1848537_1848933_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP023147.1\|WP_067170259.1\|1857305_1859258_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP023147.1\|WP_095576915.1\|1870272_1872225_-\|acyl-CoA-oxidase	unknown	unknown	gnl\|CDD\|173839
NZ_CP023147.1\|WP_067168691.1\|1874757_1875246_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366436
NZ_CP023147.1\|WP_067170236.1\|1868864_1870283_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_CP023147.1\|WP_095578166.1\|1863086_1863269_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273882
NZ_CP023147.1\|WP_095576912.1\|1853248_1855225_-\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|377378
NZ_CP023147.1\|WP_082991422.1\|1856657_1857275_+\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|224943
NZ_CP023147.1\|WP_095576914.1\|1863491_1867736_-\|bifunctional-nitrate-reductase/sulfite-reductase-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|239155

Protein	Function_ID	Function_description	E-value
NZ_CP023147.1\|WP_083020475.1\|1855312_1856590_+\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP023147.1\|WP_095576913.1\|1860003_1860687_-\|serine-O-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	4.06901e-88
NZ_CP023147.1\|WP_095578165.1\|1849538_1850930_+\|glycine--tRNA-ligase	gnl\|CDD\|235240	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional.	0
NZ_CP023147.1\|WP_095576911.1\|1851182_1852412_+\|PPE-family-protein	gnl\|CDD\|366325	pfam00823, PPE, PPE family. This family named after a PPE motif near to the amino terminus of the domain. The PPE family of proteins all contain an amino-terminal region of about 180 amino acids. The carboxyl terminus of this family are variable, and on the basis of this region fall into at least three groups. The MPTR subgroup has tandem copies of a motif NXGXGNXG. The second subgroup contains a conserved motif at about position 350. The third group are only related in the amino terminal region. The function of these proteins is uncertain but it has been suggested that they may be related to antigenic variation of Mycobacterium tuberculosis.	2.38894e-47
NZ_CP023147.1\|WP_067170249.1\|1860689_1861622_-\|cysteine-synthase-A	gnl\|CDD\|273463	TIGR01136, Cysteine_synthase, cysteine synthase. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff. [Amino acid biosynthesis, Serine family].	1.95143e-180
NZ_CP023147.1\|WP_067170246.1\|1862119_1862923_-\|sulfotransferase	gnl\|CDD\|286169	pfam09037, Sulphotransf, Stf0 sulphotransferase. Members of this family are essential for the biosynthesis of sulpholipid-1 in prokaryotes. They adopt a structure that belongs to the sulphotransferase superfamily, consisting of a single domain with a core four-stranded parallel beta-sheet flanked by alpha-helices.	1.35235e-118
NZ_CP023147.1\|WP_067170239.1\|1868066_1868534_+\|LppP/LprE-family-lipoprotein	gnl\|CDD\|379436	pfam14041, Lipoprotein_21, LppP/LprE lipoprotein. The family includes putative lipoproteins LppP and LprE from species of Mycobacterium. LppP is required for optimal growth of M. tuberculosis.	5.91169e-33
NZ_CP023147.1\|WP_095576910.1\|1848929_1849331_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	4.01289e-18
NZ_CP023147.1\|WP_095578167.1\|1872274_1874644_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.10728e-42
NZ_CP023147.1\|WP_067170281.1\|1848537_1848933_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.11431e-47
NZ_CP023147.1\|WP_067170259.1\|1857305_1859258_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP023147.1\|WP_095576915.1\|1870272_1872225_-\|acyl-CoA-oxidase	gnl\|CDD\|173839	cd01150, AXO, Peroxisomal acyl-CoA oxidase. Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. AXO is generally a homodimer, but it has been reported to form a different type of oligomer in yeast. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase acts on straight-chain fatty acids and prostanoids; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase has the greatest activity for 2-methyl branched side chains of bile precursors. Pristanoyl-CoA oxidase, acts on 2-methyl branched fatty acids. AXO has an additional domain, C-terminal to the region with similarity to acyl-CoA dehydrogenases, which is included in this alignment.	0
NZ_CP023147.1\|WP_067168691.1\|1874757_1875246_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|366436	pfam01047, MarR, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	5.83445e-13
NZ_CP023147.1\|WP_067170236.1\|1868864_1870283_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	5.58482e-101
NZ_CP023147.1\|WP_095578166.1\|1863086_1863269_-\|hypothetical-protein	gnl\|CDD\|273882	TIGR01931, Sulfite_reductase_flavoprotein_alpha-component, sulfite reductase [NADPH] flavoprotein, alpha-component. This model describes an NADPH-dependent sulfite reductase flavoprotein subunit. Most members of this family are found in Cys biosynthesis gene clusters. The closest homologs below the trusted cutoff are designated as subunits nitrate reductase.	4.15746e-07
NZ_CP023147.1\|WP_095576912.1\|1853248_1855225_-\|TPM-domain-containing-protein	gnl\|CDD\|377378	pfam04536, TPM_phosphatase, TPM domain. This family was first named TPM domain after its founding proteins: TLP18.3, Psb32 and MOLO-1. In Arabidopsis, this domain is called the thylakoid acid phosphatase -TAP - domain and has a Rossmann-like fold. In plants, the family resides in the thylakoid lumen attached to the outer membrane of the chloroplast/plastid. It is active in the photosystem II.	4.72882e-18
NZ_CP023147.1\|WP_082991422.1\|1856657_1857275_+\|superoxide-dismutase	gnl\|CDD\|224943	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism].	9.51193e-25
NZ_CP023147.1\|WP_095576914.1\|1863491_1867736_-\|bifunctional-nitrate-reductase/sulfite-reductase-flavoprotein-subunit-alpha	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0

>NZ_CP023147.1|WP_067170256.1|1859241_1859520_-|hypothetical-protein
MIRYVVVLGLGYVLGSKAGRRRYEQIVGTYRALTSSPVAKSMIEGGRRKIANRISPDAGFVTLAEIDDQTAIMERDVERLPDEELESSTRRR
>NZ_CP023147.1|WP_067170259.1|1857305_1859258_+|DNA-primase
MASPAGSWSEGDGRARGRGRIPDRDIAAIRERVRIDEVVGDYVQLRRAGADSLKGLCPFHDEKSPSFHVRPNHGHFHCFGCGEGGDVYAFIQKIEHVSFVEAVEMLADRVGHTINYSGPATSVQRDRGSRSRLVAANAAAAEFYAAALESDEAAPARQYLTERNFDAEAARHFGCGFAPSGWDSLTKHLVRKGFEFKELEAAGLSRQGRRGPMDRFHRRLLWPIRSSSGEVIGFGARRLFDDDPMEAKYINTPETLLYKKSNVMFGIDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHLSMLRRLMMDDSFFRGELIYVFDGDAAGRAAALKAFGGEQNLAGQSFVAVAPDGMDPCDLRLKSGDGVLRDLVARRTPLFEFAIRSALAEIDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLAGWVGWDDVAQVIDRVRGQSKNAKTPARGGAGPKVSRRADQPPAAAQPAASRPDPRDPTLWPQREALKSALQYPALAGPVFDTLTIESFTHPGYAAIRAAIETAGGTSSGVTGAQWLEAVRDRASSPLTAALISELGVEAIQVDEEKMPRYIAGVLARLQEVWMGRQIAEVKSKLQRMSPIEQGDEYHALFGDLVAMEAYRRSLLEQASGDE
>NZ_CP023147.1|WP_082991422.1|1856657_1857275_+|superoxide-dismutase
MKKFSGSPLMASLVMGLPVVAMTACSSPQHASSQQGTTPPVKSAPASTGATTTTPAPAGGSLSAELKTPDGRTAATATFDFTGNYVTVTVKTVATGILTPGLHGLHVHEIGKCEPNSVAPTGGAPGNFLSAGGHYQAPGHTGKPESGDLATLEVRQDGAAYLVTTTDSFTRDDLLAGTKTALMLHGAQDTENAMDRVACGVIGTG
>NZ_CP023147.1|WP_083020475.1|1855312_1856590_+|deoxyguanosinetriphosphate-triphosphohydrolase
MTRNQHDPYDDFDRQRRVTEAAKTAGLPGTEGQHRTDFARDRARVLHSAALRRLADKTQVVGPREGDTPRTRLTHSLEVAQIGRGMAVGLGCDLDLVDLAGLAHDIGHPPYGHNGERALDEVAESYGGFEGNAQNFRILTSLEPKVLDAQGNSAGLNLTRASLDAVTKYPWPRGEGAGAAARKFGFYDADREPAAWMRAGAPEGRMCLEAQVMDWADDVAYSVHDVEDGVVSQRIDLRVLADEDEAAALAKLGETEFSRVRADDFMAAARRLSGLPVVAAVGKYDATLAASVALKRLTSELVGRFASAAIATTRAAAGPGPLVRYRAELQVPDLVRAEVALLKILALQFIMSDPRHQETQAGQRERIHRVAHWLYGGAPRTLDPVFAAAFNTAADDGARWRVIVDQIASYTEGRLERIDARQAGP
>NZ_CP023147.1|WP_095576912.1|1853248_1855225_-|TPM-domain-containing-protein
MRTARLLAMLATLVTVGLSGGLLVAAPAGAQPPFRLADYVTDNAGALSDSGRGTVTAAVNKLYTDRHIRLWVVYVDDFAGQSPTAWAQRTVRASDLGGYDALLAVATTSRAYAFLVPSTVKSVNATQVDNLRRNKIEPALHSGDWSGAAVAAANGLDASPGSSGRVILLATLAGILSALAGLLLVMRHRGKRRRAAALAAARRVDPTDVNALAALPVQTLDDLSRTLVVDVDNALRTSANELDLAVGEFGEARTQPFTSAVTNAKAALSQAFTVRQQLDDDTPETPAQRRELLTQVIVSAARADRELESQTEAFEKLRDLVINAPSRLDALTQRYVELTTRLAPAEQRLAALHHDFSAAALTSVSGNVTTAKERLAFADRNIGTARELAAHAVTGGQARLVDAVRAAESALGQARALLDSVDNAAGDIAHAIDRLPSAIADLENDIARANELLQKKPTHTGDLVAARDAATRAVESARAGGSEDPLGVFGQLTKADAALNGLLATLAEEQATAERLHRSLEQALFTAQSRVRAVSDYIDTRRGSIGPDARTRLAEAKRHLQAAQDKGATNLNEAIAHANAAATLAAHAQSLANSDVQTMQRAYTRRGGSDMGAMLGGIIIGDLLSGGMRGGFGGWSPTSFGGAPGSSDGGFMGGGGRF
>NZ_CP023147.1|WP_067170270.1|1852978_1853200_+|hypothetical-protein
MLGALSVPLKWGVAVPPDDYDHWAPKTESSADTAEQTLDAPRPTAVADGVWSGWEGEAAPRPVGVIPHSPAAG
>NZ_CP023147.1|WP_095576911.1|1851182_1852412_+|PPE-family-protein
MIPAFLFFPPEINSALIVGGAGSGPLFEAASAWDGLAAELSSSASSFNTVVTDLAAGPWMGPSSVSMTAAAAPYVQWLLIAAAEAEVAAIRARLAALAFEGAVVATVPLPAVLANRARLLLLIATNFFGQNTAAIAQTELEYVEMWAQDVAAMVGYHAGAQTLVETLPAFTPPPAGLGAGAASSGLAGLADLVTAPLTLASQFFQGLSSLGTAFASQLQSVFMALSPAVSSLTSLMTSTPVATLTTVAQAGMYPATALMPPMVAMAQSTGPAAVASAAAPAPVLLSTANVAAEAPHSAHSMLSDLQPFAGGGLGALGVASAGLGGARFVGAMSVPAAWQGSMPAYVPAPAMSGAAAGAPASVATASAAAPGNGVPMTAMPVGEKGPEGEDRGTKAEVVRSRPKVVPRTR
>NZ_CP023147.1|WP_095578165.1|1849538_1850930_+|glycine--tRNA-ligase
MHRPVASVIDTVVNLAKRRGFVFPSGEIYGGTRSAWDYGPLGVEFKENIKRQWWRAVVSGRDDVVGLDSSIILPRQVWVASGHVEVFHDPLVESLITHKRYRADHLIEAYEAKHGHPPPNGLADIRDPDTGDPGQWTEPREFNMMLKTYLGPIETEEGLHYLRPETAQGIFVNFANVVTTARKKPPFGIGQIGKSFRNEITPGNFIFRTREFEQMEMEFFVEPSTAKEWHQYWIDTRLQWYVELGIDPENLRLFEHPADKLSHYSDRTVDIEYKFGFAGNPWGELEGVANRTDFDLATHSKHSGVDLSFYDQATDARYVPYVIEPAAGLTRSFMAFLIDACVEDEAPNAKGAMEKRTVLRLDPRLAPVKAAVLPLSRHADLSPKARDLAAELRQFWNIDFDDAGAIGRRYRRQDEIGTPFCVTVDFDSLEDNAVTVRRRDDMSQERVAMNTVADYLATRLKGC
>NZ_CP023147.1|WP_095576910.1|1848929_1849331_-|winged-helix-turn-helix-transcriptional-regulator
MPAAADGDMGTDLDAVTHDHGGLGAPGHSGLVDYPVPPPREILDAAGELLRALAAPVRIAIVLQLRESHRCVHELVDALGVPQPLVSQHLKILKAAGVVAGERSGREVLYRLADHHLAHIVVDAVAHASEDTP
>NZ_CP023147.1|WP_067170281.1|1848537_1848933_-|transcriptional-repressor
MTSGASVRATRQRAAISTLLETLDEFRSAQDLHDELRRRGENIGLTTVYRTLQSMAAAGMIDTLRTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEEWATAVAAKHGFSDVSHTIEIFGTCSECKA
>NZ_CP023147.1|WP_095576913.1|1860003_1860687_-|serine-O-acetyltransferase
MLAAIRRDIQAAKQRDPAAPTTAEVIFAYPGVHAIWGHRISHWLWNRGARLAARTLAEFTRIVTGVDIHPGAVLGNGLFIDHATGVVIGETAEVGDDVTLYHGVTLGGSGSDTGKRHPTVGDRVVIGAGAKVLGAIKIGDDSRIGANAVVVKPVPSSAVVIGVPGQVISRHGRNSPDDSMMPDLVGVSLQSLLTRVDKLEAMNNGEQSGRVIRPPEAGVWHGEDFSI
>NZ_CP023147.1|WP_067170249.1|1860689_1861622_-|cysteine-synthase-A
MSIAEDVTQVIGNTPLVRLRRVTEGAVADVVAKLEFFNPGNSVKDRIGVAMIDAAEKAGLIKPDTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSVERRMLLRAYGAEIVLTPGADGMPGAIAKAEELAKSDERYFVPQQFENPANPAVHRATTAEEVWRDTDGRVDIFVAGVGTGGTITGVGQVLKQRKPSAQIIAVEPAASPVLSGGQKGPHPIQGLGAGFIPPVLDEDLVDEVVTVGNEESLALARRLAAEEGLLAGISSGAAVVAALQVARRPENAGKLVVVVLPDFGERYLSTPLYADLAE
>NZ_CP023147.1|WP_067170246.1|1862119_1862923_-|sulfotransferase
MTNSPSSYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPATSQSPQPREWFAGVEDESILNLLDPLDAGTPDLAPPEIWRAYIRTVGRTPNGVWGGKLMWNQTPLLLNRAKNLPDRSGDGLLAAIRDVVGEDPLLIHVYRPDVISQAVSFWRAVQTRVWRGRPDPARDARATYHAGAIAHVVTMLRAQEEGWRNWFIEENVKPMEIPYPVLWRNLTQVVGSILEALGLDPALAPQPVLERQADHRSDEWVDRYRRDAEKHGLPT
>NZ_CP023147.1|WP_095578166.1|1863086_1863269_-|hypothetical-protein
MDWAGLPVNLDFAFSRDQRDKVYAQHLRRRRGTQFGLWRHAAYVCVCEVATDGAETLQVT
>NZ_CP023147.1|WP_095576914.1|1863491_1867736_-|bifunctional-nitrate-reductase/sulfite-reductase-flavoprotein-subunit-alpha
MAEDNAVNTMCAYCGVGCGMVLQITTDPETGRGHIAKSVGNKEHPANFGRLCTKGATTADMLGAPGRMESAYARTDRGEPLEPIEMDQAITQCASRLRAIIDEHGADAFAMYVSGQMSIEAQYLANKLTKGFIGTNQIESNSRLCMASAGSGYKLSLGADGPPGSYQDFEHADVFFVIGANMADCHPILFLRMMDRVKAGAKLIVVDPRRTATADKADLFLQIAPGSDLALLNGLLHLIVENSHTDPDFIAEFTEGWEVMPSFLEQYTPDKVAAMTGIPEDGIRAAAQMIGEADNFVSCWTMGLNQSTHGTWNTNAICNLHLATGAICKPGSGPFSLTGQPNAMGGREMGYMGPGLPGQRSVVSDDDREYVENVWGIPRGTLGTEVGGGTIDMFSRMAEGQIKACWIICTNPVASVANRKTVLAGLERAELVMAQDAFLETETNEYADVLLPAALWAESEGVMVNSERNMTLFQPAVPAPGHAMPDWQIIARIACEMGFSEAFSYSCAEEVFEEIKQFTNPKTGYDLRGISYERLRQSPVQWPCAPDSDGDRNPIRYLNDGVSQAQLVRDDGTVPRLAFPTANGRAVFFARPHLLPEEMPDDDYPFLLNTGRLPHQWHTMTKTGKVAKLNKLNSGPFVEIHPDDAARLHIGDDDPIEIASRRGRAVLPAVVSDRVRPGNCFAPFHWNDAFGEYLSINAVTNDAVDPISNQPEFKACAVTLTKVAVSQPDSGTTTTTITDAPESEATEVGEISVSQVDALGELLGVTTLPKPEFNELGRAYLAGMLTGLRSDAGRRTAGVPTLPASAPFDSGTRLWVDGLLAGLFSRIDGPLPAALPTAPPSAPMPAVGQPPVAPADSAPAPERAPVVVLWASQTGTAEELAAEIAARLGDAKLPVALHSMDDFPVAELAATRELLLITSTTGDGDAPDNGAGLWRALTSETAPRFSDTRYAVLALGDSNYDDFCGHGRNLDARLAELGATRITDRVDCEPDYDDPAAKWLGDIVDALTRTPTPVGGDGEAAEPAARGSVVVAPSRPSPPAASTYNKKHPLITDMVRNTMLSQPTSAKDVRQLVFNLPEETVSYEAGDALGVWPRNSDQLVDEWLAVTGLDGQTPVEVGEHGLMSLRSALTERIEIAHISRDLVRFVQERTGDPKLAELLKPENKRALSDWTWGRQSIDLLAQLPVIASAHEWLRVLKRLQPRLYSISSSPKACPGEVHLTVSPVRYNFQGVPRRGVCSTYLADRSPGDRVAVYLQASSNFRPPSDPDTPMIMIGPGTGIAPFRGFLQERRALGHTGPNWLFFGEQHAATDYYYRDELEQMRDDGFLTELDLAFSRDQQDKVYVQHLMRSRGAQLWSWLQDGAQLYVCGTADPMAKDVDRALCDVAAEFGNLDPDAAQAYVQGLSADKRYHRDVY
>NZ_CP023147.1|WP_067170239.1|1868066_1868534_+|LppP/LprE-family-lipoprotein
MILLVLLACGCGGKPAAPPQAKPDTCKASDGPTADTVRQAITAVPIAIPGTIWVEIGRGHTRNCRLSWVQIIPTIASESTPQQLLFFDHNRPLGTASPNAKPYITVLPPSDDTVTVQYRWQKGNDQLCCPSGIGTVKFRIGPDGKLQTDGKIPNQ
>NZ_CP023147.1|WP_067170236.1|1868864_1870283_+|NarK/NasA-family-nitrate-transporter
MGRSRRIPHWDPEDHVAWEAGNKIIARRNLIWSIATMHVAFSIWYLWSVMVLFMPQSVYGFSTGDKLLVGAIAALVGALVRIPYAMATARLGGRNWAVLSSLVLLIPTAGAIVLLAHPGLPLWPYLVCAALTGLGGGNYAASLAHVESFFPQRRKGFALGLTGGIGNLGAASIQAVGLFVLAAAGNRAPYWVCAVYLVLLAVVGVGAAVFMDNLDHFIEVAHVRSVLAVPDTWAISFLYMCASGSFIGFAFAFGQVIAHNLMAGGQSHAQAALHAAEIAFTGPLLGSVARVVGGKLGDRFDGGRVTLTMLVAMVVAGGSLVAVSTHDDLTRGHAGSMPVYTTIGYTAGFIALFIFCGVGKGSVFKLIPSVFAERSRALNIPDVDRRHWERARSAALIGFAGSFGALGGVVITLALRQSYASTGTGTPAFWAFMIWYVAAAILTWARYVRPQRAIEPPGQPDREAITELPVSS
>NZ_CP023147.1|WP_095576915.1|1870272_1872225_-|acyl-CoA-oxidase
MAPEKTSTAEHLRNALDGRWRDVRNRMRTTLTEDLFRPHYTPNTVIARTKVAEQMRIMAAFGAAADSFRKEHGGTGDVGAAITMIEMLAMSDLSLMVKAGVQWGLFGGAVENLGTERHHETYVPKIISLELRGCFAMTETGHGSDVQSLETTATYDADTQEFVINSPTPSARKDYIGGAAETATMAAVFAQLITTEGGKPVNHGVHCVLVPIRDEDGNDLPGITTSDCEYKGGLPGVDNGRIVFDHVRVPRVNLLNKYGDVAPDGTYSSPIENPNRRFFTMLGTLVRGRITVGGSAGAAGRVALDIATRYALQRRQFNAPDDSSEVLIMDYLVHQRRLFPLIAKSYALQFAQNELVSKCHDVQSADAPDADEQRELEARAAGLKAANTWHASRAIQESREACGGAGYMAENRLIGLRGDTDVFTTFEGDNHVLTQLVAKELLTAYADDIKSMSPVEWVRFAANTVGERVIKRTAAETIIQTIVDTRQDSEEEGSLFNRGTQIKMFEDREEYLLASVARRLQAKSKEMSEFDAFNSVQDHVLHAASAHIDRVVLEAFVAGIDACEDEEARELLGILCDLYALSVIEDDKAWYIEHRYLSTERAKAVTRGINDRCRALRPHAETIVDGFGVPERLRYAEMLHPENLADAVTS
>NZ_CP023147.1|WP_095578167.1|1872274_1874644_-|ATP-binding-cassette-domain-containing-protein
MPTEASAVPAAPLTVWAGPSRYVFTPGRDVLVGYGPGCDIPLERLGSPAPPPPAPHPDVVLRFTGALWVALDLSHRGVFVDGFRVPTVEIRDGLAITIGDPQHGPRLVFQLAPSAAPPGQPPPGGPDPRIPTQSATQRMPVVAPPPRPPGPPGPPPPPAPPPPPSPPPGAAPPPIPPPVAPIHPPVAPTEPPKGPGLIERMITSKLRAQRPAARTDETNSTFRLPLRTAARTTGVTAYRLGLAVGGQQILSDISFTARPGTMTAVIGPSAARNSALLAVFAGARTPSSGRTTVDGHDVHAEPQAMRSRIGVVARDDQLHRQLTVEQAVRYAAELRLPPEATPEQRERIVDQVLDELDLTPHRATRIRKLAPELRRCAALAIELITRPSLLVVDEPTAGLDPAQQRHVMAVLRRQANIGCVVVAAISARASLTDVNTCDQVLVLTGTGKAAYLGSPQQAESTLGTADWSQVLARVSADPDGTHRAFRGRPQPLTAAPEVAAPWAPTARLPRHRQIRVLARREVRLLLAHRLYFAFLAILPFALAGLTLLIPGDTGLARPEPGSANGHEAIEILAALNVGAVILGTALTIRALVLEHGIFRREQHVGLSAPAYLTAKLTVYGLAAALWTAVMFAIVVAVKGGPAGGAVLLHNATIELYVTAAATAIVSAVIGLTLSALGKALREVLPLVVPVILASALFNGSLVQLVNLWGLQQISWFVPAQWGFAASASTVNLRRIDDLAVNVLTWTHYSGWWVFDMVMLGLFGAVAAGFTLYRLRSPLPGAQNTPARTT
>NZ_CP023147.1|WP_067168691.1|1874757_1875246_-|MarR-family-transcriptional-regulator
MDNVVDTAKLEGAQGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEVHGEARIGDLAAVDHCSQPTMTTQVRRLEEAGLVTRTVDPGDARAVRIRITAAGRRTLNAVRADRANAIEPQLALLDAGDRQVLMQAVDVLRRLLDDASLATSLAGRRNPL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023147_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023147_3

2444941-2445053

Orphan

Consensus_repeat	Method
GCCAGCGGCTGTGGGCCGACGCCGAGCGGTCGGCAGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023147_3

>merge|NZ_CP023147|3|2444941-2445053|CRISPRCasFinder
GCCAGCGGCTGTGGGCCGACGCCGAGCGGTCGGCAGACGTTGGCGGTTGGATCCCACCACTGGCCCGGGTCGCATGCCAGCGGTTGTGGGCCGACGCCGAGCGGTCGGCAGAC

>NZ_CP023147|3|3|2444941-2445053|CRISPRCasFinder
GCCAGCGGCTGTGGGCCGACGCCGAGCGGTCGGCAGAC	GTTGGCGGTTGGATCCCACCACTGGCCCGGGTCGCAT
GCCAGCGGTTGTGGGCCGACGCCGAGCGGTCGGCAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023147.1\|WP_036459001.1\|2443873_2444698_-\|PPOX-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274712
NZ_CP023147.1\|WP_165605057.1\|2438698_2439178_-\|DUF3237-family-protein	unknown	unknown	gnl\|CDD\|378678
NZ_CP023147.1\|WP_067169755.1\|2451476_2452712_-\|osmoprotectant-NAGGN-system-M42-family-peptidase	unknown	unknown	gnl\|CDD\|132150
NZ_CP023147.1\|WP_095578198.1\|2441220_2442006_-\|2-keto-4-pentenoate-hydratase	unknown	unknown	gnl\|CDD\|226480
NZ_CP023147.1\|WP_095578200.1\|2445968_2446325_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|273688
NZ_CP023147.1\|WP_095577122.1\|2436951_2437770_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023147.1\|WP_067169758.1\|2450712_2451480_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP023147.1\|WP_095578199.1\|2443088_2443739_+\|cutinase-family-protein	unknown	unknown	gnl\|CDD\|366455
NZ_CP023147.1\|WP_095577124.1\|2440687_2441026_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_095577125.1\|2442188_2442770_-\|deaminase	unknown	unknown	gnl\|CDD\|334719
NZ_CP023147.1\|WP_036459007.1\|2447775_2448390_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_165605061.1\|2449246_2449705_-\|lipocalin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|372819
NZ_CP023147.1\|WP_082991412.1\|2439958_2440387_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366161
NZ_CP023147.1\|WP_067169772.1\|2445301_2445955_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226648
NZ_CP023147.1\|WP_095577123.1\|2437856_2438465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_036459011.1\|2449977_2450661_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378566
NZ_CP023147.1\|WP_095578197.1\|2439274_2439889_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP023147.1\|WP_036459005.1\|2446515_2447082_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP023147.1\|WP_067169766.1\|2448420_2449182_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235816
NZ_CP023147.1\|WP_095577126.1\|2447111_2447555_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915

Protein	Function_ID	Function_description	E-value
NZ_CP023147.1\|WP_036459001.1\|2443873_2444698_-\|PPOX-class-F420-dependent-oxidoreductase	gnl\|CDD\|274712	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN. [Unknown function, Enzymes of unknown specificity].	3.58872e-30
NZ_CP023147.1\|WP_165605057.1\|2438698_2439178_-\|DUF3237-family-protein	gnl\|CDD\|378678	pfam11578, DUF3237, Protein of unknown function (DUF3237). This family of proteins has no known function.	1.6574e-14
NZ_CP023147.1\|WP_067169755.1\|2451476_2452712_-\|osmoprotectant-NAGGN-system-M42-family-peptidase	gnl\|CDD\|132150	TIGR03106, trio_M42_hydro, hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.	0
NZ_CP023147.1\|WP_095578198.1\|2441220_2442006_-\|2-keto-4-pentenoate-hydratase	gnl\|CDD\|226480	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism].	9.87002e-105
NZ_CP023147.1\|WP_095578200.1\|2445968_2446325_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|273688	TIGR01552, Hypothetical_protein_Rv3357/MT3465/Mb3392., prevent-host-death family protein. This model recognizes a region of about 55 amino acids toward the N-terminal end of bacterial proteins of about 85 amino acids in length. The best-characterized member is prevent-host-death (phd) of bacteriophage P1, the antidote partner of death-on-curing (doc) (TIGR01550) in an addiction module. Addiction modules prevent plasmid curing by killing the host cell as the longer-lived killing protein persists while the gene for the shorter-lived antidote is lost. Note, however, that relatively few members of this family appear to be plasmid or phage-encoded. Also, there is little overlap, except for phage P1 itself, of species with this family and with the doc family. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	1.87822e-07
NZ_CP023147.1\|WP_095577122.1\|2436951_2437770_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.52438e-39
NZ_CP023147.1\|WP_067169758.1\|2450712_2451480_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.70519e-19
NZ_CP023147.1\|WP_095578199.1\|2443088_2443739_+\|cutinase-family-protein	gnl\|CDD\|366455	pfam01083, Cutinase, Cutinase.	1.23165e-45
NZ_CP023147.1\|WP_095577125.1\|2442188_2442770_-\|deaminase	gnl\|CDD\|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	6.57985e-11
NZ_CP023147.1\|WP_067169766.1\|2448420_2449182_-\|SDR-family-oxidoreductase	gnl\|CDD\|235816	PRK06500, PRK06500, SDR family oxidoreductase.	1.07821e-73
NZ_CP023147.1\|WP_165605061.1\|2449246_2449705_-\|lipocalin-like-domain-containing-protein	gnl\|CDD\|372819	pfam13924, Lipocalin_5, Lipocalin-like domain. This family includes domains distantly related to lipocalins. However, they do contain the important GXW motif in the first strand. The protein in this family include aln5, which is involved in biosynthesis of alnumycin. The family also includes the ZFK protein from Trypanosoma brucei which is a protein kinase. This domain is at the C-terminus of that protein. The domain is also found as the C-terminal domain in StiJ a protein involved in producing stigmatellin. This domain has been assumed to catalyze a final cyclisation reaction.	9.78901e-43
NZ_CP023147.1\|WP_082991412.1\|2439958_2440387_-\|hypothetical-protein	gnl\|CDD\|366161	pfam00553, CBM_2, Cellulose binding domain. Two tryptophan residues are involved in cellulose binding. Cellulose binding domain found in bacteria.	2.99565e-33
NZ_CP023147.1\|WP_067169772.1\|2445301_2445955_-\|AAA-family-ATPase	gnl\|CDD\|226648	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown].	7.29338e-35
NZ_CP023147.1\|WP_036459011.1\|2449977_2450661_+\|hypothetical-protein	gnl\|CDD\|378566	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein. SAP is a transmembrane transport protein with six predicted transmembrane helices, with a hydrophilic domain between helices 3 and 4. This hyrodphobic region is highly variable among identified Gap-like (GPL, peptidoglycolipid, addressing protein) proteins and may be involved in substrate recognition. SAP also belongs to the LysE protein superfamily (pfam01810), whose members have been implicated in small molecule transport in bacteria. Other Gap proteins export metabolites across the cell membrane so it is possible that Sap specifically may be involved in transport of sulfolipid-1 across the membrane.	0.00153494
NZ_CP023147.1\|WP_095578197.1\|2439274_2439889_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.85635e-08
NZ_CP023147.1\|WP_036459005.1\|2446515_2447082_+\|peptidylprolyl-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	3.27578e-20
NZ_CP023147.1\|WP_095577126.1\|2447111_2447555_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.74777e-09

>NZ_CP023147.1|WP_036459001.1|2443873_2444698_-|PPOX-class-F420-dependent-oxidoreductase
MMNRLSTPARIFVVTTAAVVGIVTAGIGIWCLIDPNSFAGSVGFEAHRHFLHDVGAFQLGLGVTVLLALIWADALATALAGFIVANTVHTVNHVIDLDVGGSPEQAWVLGAVSVVLVVAFALRLRQLGYVLGAVGTATNSALAPFVRQKTISLTTFRKDGTPGSSPVSIVVEGDRAYVRSFERAVKVRRIRRNPNVEFGAATASGKPTGSTLSGTVRLLDGAEYSKAGYLLRQKYPLLHGVLVPLAHRAMRSKYGRTIHAELIPCSGPLATEPE
>NZ_CP023147.1|WP_095578199.1|2443088_2443739_+|cutinase-family-protein
MGTMPAPPASAEPCPDVDVVFARGTGEPPGVGGVGQAFVDALRSRVGGKSVGVYPVNYEASGDFNGGIEFARTFVDGIRDAGSHVESTASNCPNTKVVLGGYSQGAAVAGFVTSPVVPKEVPQEFVSYVPQPLPQSVANHVAAVVLFGTPSNEFLRGAGAPPITIGPLYAPKTIQLCASDDTICNGAPPGPPGIAHTLYAANGMVDQGADFAASHL
>NZ_CP023147.1|WP_095577125.1|2442188_2442770_-|deaminase
MTTTYTFDVFSSLDGFGGVSGGDWGGYWGKQGPELLDHRLALYGKKQRMVLGANTYRLFAQMLAQSTEDSEVHDPWVTRMRHLPATVVSTTLDGPLDWPAATVACGDAVDIVARLKEESEVPLRSHGSLSMNRALMAVGLVDRVQVTIFPVITGQTGDDRIFDGAADFDLELIETRTLDRNIQELVYRPTLHL
>NZ_CP023147.1|WP_095578198.1|2441220_2442006_-|2-keto-4-pentenoate-hydratase
MLSVAIRDELAADLAHAERSRAPIAPLIVAYPDIDVVDAYEIQLINIRQRVAEGARVVGHKVGLSSLAMQQMMAVDEPDYGHLLDEMQVFEDVPVEAAHYLYPRVEVEVGFILSEDLPGAGCTEDDVVAATAALAPSIELIDTRITDWKIALCDTIADNASSAGFVLGEARVPPRDLDAKAIDAVLTRNGEVVAEGRGDAVLGNPVTAVAWLARKIESFGVRLRKGDIVLPGSCTRAIDARPGDEFVAEFSGLGSVRLSFE
>NZ_CP023147.1|WP_095577124.1|2440687_2441026_+|hypothetical-protein
MGLFKSKRRPKLAAGEAKIYYSTPFGDTKDGKQKLFLLERDGVRYFPVFRSVESAKEFYERMNRAAYMLIEGDIKSAMDATASIDPTKSVGMMIEPLSEHPHEIMPDSDAGA
>NZ_CP023147.1|WP_082991412.1|2439958_2440387_-|hypothetical-protein
MARLNDYVKRWRTALHVAVSALMVAIIGLAISPVAHAAAATATLSVAHTWQTGFIANFTVTNSSMAPLSDWKLEFDMPAGQSVSHTWNSTITQSGTHYVLTPANWNRVIAPGGSATGGLRGVLSGTYSPPSNCVLNRQYPCT
>NZ_CP023147.1|WP_095578197.1|2439274_2439889_+|helix-turn-helix-transcriptional-regulator
MRRRPDEAKSLILKAAEELLIEGGPRAIEVRAVAERVGMTDAGINHHFQDRDGLLVALLRHGGGRVRAAVEHAAQDWVRRGARVAELVDCIATVYEDGYGELAMALHTAGWRDDGGGILDPVVDALHAARKKSGGHRPARGDTRLAVAALHQALATESAYGAAFRRSAGIAEPRASQHRQQRRWWVRTLVTVLDIDQTATRARS
>NZ_CP023147.1|WP_165605057.1|2438698_2439178_-|DUF3237-family-protein
MRDIQDRLPGVEEDASLVPLFRGVWSLAPYVVLPGTPVGTRAIVEMTDGKLEGRGLRAHARPHACADWLVVGADGTGTMDYRGTVETEDGQVIYLYGSGRCDLSSGFGDGTILRGAVHFETSCDSYRWLNHVHAVFRGVVAGDGAAGKGRLHDEWFEVR
>NZ_CP023147.1|WP_095577123.1|2437856_2438465_-|hypothetical-protein
MRTIAYRHAAVVGLAAVALFAAGCSNGKSVDASSPPQTSVKASSASNTPVQPPEVKLRGERDVEVTLTGPIAAKYSSATEEQRQALGKPLTGDRNAGKRESGLVFQQFQGGVITAKNDAAGTPAYITLGKIRDAWNIPRAPDGTPAVTGSNGSAGPLGFPTSDVNAVGDLQVSTFEHGKIEYNPTTGQVNVTVNGKVVPSGL
>NZ_CP023147.1|WP_095577122.1|2436951_2437770_+|alpha/beta-hydrolase
MPAITTSDGAEIFYKDWGSGQPIVFSHGWPLTADDWDAQMMFFLHHGYRVIAHDRRGHGRSEQTGNGNDMEHWVADLASLTEQLDLHDAIHIGHSTGGAEVACYVARHQERVAKAVLVSSPTPSMAQTENNPGGQPQEWFDAVQAGVLGNRSEFFRAVPEGPFYGFNRSGVEPSEAVIANWWRQGMSGSAHAHYETVFSWLHDYTEDLRAITVPVLVMHGDDDQIVPFASSVPRAVDLLQNGALKTYAGYPHGMLTTHADVLNPDLLAFIAP
>NZ_CP023147.1|WP_067169772.1|2445301_2445955_-|AAA-family-ATPase
MARTKTQPAQIHVLAGVNGAGKSSVVGATIRDKGGQYYNPDEAAREIIAAKPGLGQAEANAAAWEQGRRLLQRAIDEGLDFTFETTLGGNTMPALLAEAAKRGLQVHVFYVGLDSADTCIERVRQRVRAGGHDISDADIRRRYRHSLINLVKLLPVLTGLRVYDNSASADPAIGQAPRPVLVLHMDRGRIVGPPDLSSTPAWAKPVVAAALDLARRS
>NZ_CP023147.1|WP_095578200.1|2445968_2446325_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MSTVSFRNRDGKLVDVPSVTASRLKNEFGTVFDEAAVSGAVVITKHNTPRAVLLSYAEFEALAATAAPALDDLSERFDELLATMQRSKAKAGVAAAFDATPEELGAAAVKAARTAPSR
>NZ_CP023147.1|WP_036459005.1|2446515_2447082_+|peptidylprolyl-isomerase
MTAVNSFRMYSSVALAACAAATVLLLAGSGTANAAGSCPTAAPQNGGAPDWTLAGNTGSVAVTGSTDTTAPRVTVTAPFAVTQTQVHTLHAGDGPVVSSTAKVSVCYMGVNGRDGSVFDSSYERGAAVDFPLTGVVPGFQKAIAGQKVGSTVAVAMVPADGYPQGQPSAGIRPGDTLVFAIKILSASG
>NZ_CP023147.1|WP_095577126.1|2447111_2447555_-|nuclear-transport-factor-2-family-protein
MTKSVATKNDNEKIVVDFIHAAYGKSMDIDAMTALMADDFAWQLHVPLSPVVRGRNAARAELEKHNTLSTGMVEGSEIRTIVSDGDTVIVERVDVNSMNGVTVTFYVTAIFEVRDGAITHWREYWDTAHVAQQLGIDPALMFAPLGN
>NZ_CP023147.1|WP_036459007.1|2447775_2448390_+|hypothetical-protein
MAEIFNRTVSRRAFVRGVGLSVPVVGVVAFAAPQALASPPGCDDPSGMVDNCAVQLPEEFTSTSFSTTAIAGGTNYSILFSTKISSGPLVPKGATGYRIRSTSVAGQKQDGTPFSLKPAIGEAGPRVLGARSASSLGFSLDVVWSGGQLVRSFDYTYDVAFLNGLTEIQTCTYMTTMTLADNGLTLGGVGSVTFSPPRLTVCAG
>NZ_CP023147.1|WP_067169766.1|2448420_2449182_-|SDR-family-oxidoreductase
MGLLDHKTAVITGANSGIGLAIAERFLAEGAERVFITGRRQAELDTAARELGSRAIAVAGDVGTPKDLDRLYARVASAGQGLDIVMANAGSTRVAPLGEITDDDLDALLTTNVKGVVYTVQKALPLLNDGASVILTGSTTADRGRAGLSIYAATKAAVRSLARAWANELAGRNIRVNVIVAGSTATPGSDTLAAQTDPDASIDEFRAGRIATIPLGRFADPVEIANAAVFLASDLSSFTTGSTLTADGGFNQV
>NZ_CP023147.1|WP_165605061.1|2449246_2449705_-|lipocalin-like-domain-containing-protein
MTPQELREYLVGAWALESYQSSDPDGSNPRYPLGPDARGIIMYTADGYMSAQIMRADRAPFTRGDLQIADASELVAAAKGYLAYAGPYSVLDNGVIAHHVDVSLLPNWVGGTQYRAAKAGDGRLELSPAEPVVIKGRPRHGRLLWQRAKNPE
>NZ_CP023147.1|WP_036459011.1|2449977_2450661_+|hypothetical-protein
MAALILALAGLAFLDSLNVLNVGVVSAVIFDSRLGRRSPIPGALSFVAGVFAVTTTFGLCTVLGISFITQALDFHITPAIRFRGELLLGIVLIGLAYFPLTAQSSAPGWAMAAMRKRPWLLGFLGLAVGSGQAPTAVPYLTGLAMLAALHPRPPLWPLIIIAYCAIAITPPLAILALSMRRTVRAMRIQRGLVRVLTRYGPMSVRLLFLVFGVGLIADAFVNHSALW
>NZ_CP023147.1|WP_067169758.1|2450712_2451480_+|class-I-SAM-dependent-methyltransferase
MTDRQARAMSFGSIAEDYDSLRPQAPQQAVDWLMPSGCEVAVDLGAGTGLFTRTLVGRAAHVIAVEPDARMRAVLADRSPGVRVLEGSGESIPLPDRAADAVFVSAAWHWMDPERAVPEIGRVLRDGGRFGLIWTSRDRDVDWIRDLDLLPGDDATEADAPARFRRLHEDVALPDPQIFHHVAREAFRFVRTMRVDDVVAMLGTYSRIITASPDDRERRLANARAALRERFGAADAIDVPMQSRCWRADRMARGS
>NZ_CP023147.1|WP_067169755.1|2451476_2452712_-|osmoprotectant-NAGGN-system-M42-family-peptidase
MGQTAAMAEADRTWMIDTLLALLQTPSPSGRTDAVMQVIGDILDDFGVPFTLTRRGALTAELPGESATTDRALVVHSDTIGCMIRNLKDNGRLELVPVGTFSARFAAGARVRIFIDDPDEFITGTVMPLKSSGHAFGDEIDTQPTDWEHVEVRIDRRVSTRDDLVRLGLQVGDFVALITSPELTADGFIVSRHLDGKAGVAIALALAKNFSENKVVLPHRTTILVTITEEVGHGASHGLPADVAELVSVDNAVCAPGQHSLEDGVTIPMADMHGPFDYHLTRKLCRLAQEQGIPFARDIFRYYRSDAAAAIEAGANTRAALVGFGLDGSHGWERTHIDSLEAAYNLLHCWLQTPLTFAKWDAKPTGRLRDFPSSKQPAPSERWVPLSRGDYESPGEASPGTPWPPSEGPQA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023147_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023147_4

4695777-4695855

Orphan

Consensus_repeat	Method
CAGTGATGGCGGCGACCCGCTGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023147_4

>merge|NZ_CP023147|4|4695777-4695855|CRISPRCasFinder
CAGTGATGGCGGCGACCCGCTGCGCCCGGCTTCACCGCGCTTGCGATCGCCGCGCAGTGATGGCGGCGACCCGCTGCGC

>NZ_CP023147|4|4|4695777-4695855|CRISPRCasFinder
CAGTGATGGCGGCGACCCGCTGCGC	CCGGCTTCACCGCGCTTGCGATCGCCGCG
CAGTGATGGCGGCGACCCGCTGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023147.1\|WP_095577868.1\|4696807_4697281_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP023147.1\|WP_067167448.1\|4693756_4694065_-\|DUF3263-domain-containing-protein	unknown	unknown	gnl\|CDD\|378688
NZ_CP023147.1\|WP_163648926.1\|4703592_4705221_+\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP023147.1\|WP_095577869.1\|4697302_4701748_+\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319840
NZ_CP023147.1\|WP_067167465.1\|4688198_4688819_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP023147.1\|WP_095577871.1\|4705357_4706152_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP023147.1\|WP_067167435.1\|4702665_4703373_-\|ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP023147.1\|WP_095577866.1\|4694861_4695743_+\|GNAT-family-N-acetyltransferase	unknown	unknown	unknown
NZ_CP023147.1\|WP_082991315.1\|4702173_4702530_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP023147.1\|WP_067167427.1\|4706151_4706781_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|226101
NZ_CP023147.1\|WP_095577865.1\|4689643_4690666_-\|TIGR03617-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|132656
NZ_CP023147.1\|WP_095577870.1\|4701869_4702145_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_095577872.1\|4707279_4708155_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274648
NZ_CP023147.1\|WP_067167462.1\|4688828_4689647_-\|crotonase	unknown	unknown	gnl\|CDD\|236206
NZ_CP023147.1\|WP_067167457.1\|4690688_4691327_-\|ATP-dependent-protease	unknown	unknown	gnl\|CDD\|225362
NZ_CP023147.1\|WP_067167425.1\|4706827_4707262_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP023147.1\|WP_067167452.1\|4692446_4693130_-\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|224943
NZ_CP023147.1\|WP_067167445.1\|4694268_4694862_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP023147.1\|WP_083019480.1\|4693263_4693737_-\|LytR-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379163
NZ_CP023147.1\|WP_067167455.1\|4691326_4692457_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|237408

Protein	Function_ID	Function_description	E-value
NZ_CP023147.1\|WP_095577868.1\|4696807_4697281_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00384056
NZ_CP023147.1\|WP_067167448.1\|4693756_4694065_-\|DUF3263-domain-containing-protein	gnl\|CDD\|378688	pfam11662, DUF3263, Protein of unknown function (DUF3263). This family of proteins with unknown function appears to be restricted to Actinobacteria.	7.42655e-34
NZ_CP023147.1\|WP_095577869.1\|4697302_4701748_+\|cation-translocating-P-type-ATPase	gnl\|CDD\|319840	cd07539, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporters. This subfamily contains P-type ATPase transporters of unknown function. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd2+, and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_CP023147.1\|WP_067167465.1\|4688198_4688819_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.06982e-10
NZ_CP023147.1\|WP_095577871.1\|4705357_4706152_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	3.49702e-139
NZ_CP023147.1\|WP_067167435.1\|4702665_4703373_-\|ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	8.64229e-17
NZ_CP023147.1\|WP_082991315.1\|4702173_4702530_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	9.81935e-20
NZ_CP023147.1\|WP_067167427.1\|4706151_4706781_+\|alpha/beta-hydrolase	gnl\|CDD\|226101	COG3571, COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only].	1.23566e-77
NZ_CP023147.1\|WP_095577865.1\|4689643_4690666_-\|TIGR03617-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|132656	TIGR03617, F420_MSMEG_2256, probable F420-dependent oxidoreductase, MSMEG_2256 family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by MSMEG_2256 from Mycobacterium smegmatis. [Unknown function, Enzymes of unknown specificity].	5.04019e-162
NZ_CP023147.1\|WP_163648926.1\|4703592_4705221_+\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP023147.1\|WP_095577872.1\|4707279_4708155_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274648	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by Rv1855c from Mycobacterium tuberculosis. [Unknown function, Enzymes of unknown specificity].	1.61203e-116
NZ_CP023147.1\|WP_067167462.1\|4688828_4689647_-\|crotonase	gnl\|CDD\|236206	PRK08260, PRK08260, enoyl-CoA hydratase; Provisional.	4.81082e-71
NZ_CP023147.1\|WP_067167457.1\|4690688_4691327_-\|ATP-dependent-protease	gnl\|CDD\|225362	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only].	6.98449e-47
NZ_CP023147.1\|WP_067167425.1\|4706827_4707262_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.22911e-15
NZ_CP023147.1\|WP_067167452.1\|4692446_4693130_-\|superoxide-dismutase	gnl\|CDD\|224943	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism].	3.07148e-34
NZ_CP023147.1\|WP_067167445.1\|4694268_4694862_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	2.49154e-69
NZ_CP023147.1\|WP_083019480.1\|4693263_4693737_-\|LytR-C-terminal-domain-containing-protein	gnl\|CDD\|379163	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator. This family appears at the C-terminus of members of the LytR_cpsA_psr, pfam03816, family.	3.97293e-08
NZ_CP023147.1\|WP_067167455.1\|4691326_4692457_-\|glutamate--cysteine-ligase	gnl\|CDD\|237408	PRK13517, PRK13517, glutamate--cysteine ligase.	0

>NZ_CP023147.1|WP_095577866.1|4694861_4695743_+|GNAT-family-N-acetyltransferase
MISWPALGTRVMVRYRLAEGSVPPLTDAVGHLLAVDPVVRVQTKSGAVVDCRPADVVMLRVLTFAPVRTSDIRALEHAAAMAWPGVEHTWLEGWLLRAGHGSELPPNSAVPLDLSARLSTVPAIADWYGRRGLTPRLAIPDRLLSVPTGSTGEHPESVLVRDVSEMAAREPNPSVRLSAQPDDAWLSIFGPDVDVDVLTAVSDGELMFGTDGAAVARAAVTEAPDGARWVGLSAIRGDDDRATTALCEALLAWGAGRGATRGYVAVPDTEADTGWLDFRLHHHRRYFPVRQGA
>NZ_CP023147.1|WP_067167445.1|4694268_4694862_+|peptide-deformylase
MAVVPIRIVGDPVLHTPTKPVPVAADGSLPAELPALIADLYDTMDAAHGVGLAANQIGVGLRVFVYDCADERGRTERRRGVVVNPVLETSEIPETMPDPDNDDEGCLSVPGESFPTGRAKWARVTGLDADGNPVTLEGNDLFARMLQHETGHLDGFLYLDRLVGRHARSAKRAVKSNNWGVPGLSWLPGEGPDPFGH
>NZ_CP023147.1|WP_067167448.1|4693756_4694065_-|DUF3263-domain-containing-protein
MDSAMARANRSGDDSDVADGLTRREHDILAFERQWWKFAGVKEDAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
>NZ_CP023147.1|WP_083019480.1|4693263_4693737_-|LytR-C-terminal-domain-containing-protein
MKERVPDSTGLPLRAMVMVLLFLGVIFLLLGWQALGTSGNSDDDSASPVSSATATASATSTSNKPATTQAEVQVYNISTKEGVAARTGDQLTSAGFKVTKVDNMTVPDVSATTVYYTDADDEHATADAIGKKLGAPVEPRIPALSGEPPGVIVLVAG
>NZ_CP023147.1|WP_067167452.1|4692446_4693130_-|superoxide-dismutase
MRKLPPSLVLAGCVALLGACSTPQYASSVPGTTPAVWTGSPSPQGAKGAEAGPAEVPTVTTHLKAPDGTQVAVAKFEFNNGYATVTIETTANGVLAPGFHGVHIHKVGKCEPNSVAPNGGAPGDFLSAGGHFQVSGHAGEPASGDLTSLQVRKDGSGTLVTTTDAFAMEDLLTGQKTAIIIHAGADNFANIPAERYNQTNGTPGPDEMTMTTGDAGKRVACGVIGAG
>NZ_CP023147.1|WP_067167455.1|4691326_4692457_-|glutamate--cysteine-ligase
MPAKRRDARIDFARSSRPTIGVEWEFALVDAQTRDLSNEATAVIAEIGENPRVHKELLRNTVEVVTGICQSAGEAMEDLRQTLGPARRIVRDRGMELFCAGAHPFAQWTSQKLTSGARYAELIKRTQWWGRQMLIWGVHVHVGISSPNKVMPIMTSLLNYYPHLLALSASSPWWTGVDTGYASNRAMMFQQLPTAGLPFQFQTWSEFEGFVYDQKKTGIIDHVDEVRWDIRPSPHLGTIEMRICDGVSNLRELGALVALTHCLVVDLDRRLEADESLPSMPPWHNQENKWRAARYGLDAVIILDADSNERLVTEDLDEVLNRLEPVAKKLNCVDELAAVAEIPRQGASYQRQRRVAEEHDGDLRAVVDALVSELEI
>NZ_CP023147.1|WP_067167457.1|4690688_4691327_-|ATP-dependent-protease
MMESLELAMFPLESALLPDQDLPLRIFEPRYGALVRHCVDTGDPFGVVLISQGREVGGGDSRCDVGVLSRITECADQGAGRYALHCRTGERIRVCEWLPDDPYPRARITLWPDEPGPEVSPAQLLDVEDRAVALFERIAQARGITLPGREVLLGHDSQGPAGERLFALASRIPIGTADRYTVLAAPTAAERLAALSEAVNAVAEVVEFQLSE
>NZ_CP023147.1|WP_095577865.1|4689643_4690666_-|TIGR03617-family-F420-dependent-LLM-class-oxidoreductase
MKVHLQVDGSPAGATASAAEIAARGADGLFTFEGQHDVFFPLLLAAGTTGLDLMTNVAIAPPRSPLHLAHSAYDLQLYSGGRFRLGLGSQIKVHIEKRYGSKWDKPAARMAEAIAAIKAIFAAWEGQGRLDFRGEFYTHTVMAPNFNPGPNPFGPPAMLLGALGPVMTRTAAEVADGLLVMPFNSARHFAERTVPAIGEGLRRSGRAFGEFTIIAQAMVAVGRDEADLAAAVNGVASLIAFYGSTPAYLPVLQVEGWADVQPELNTLSKQGRFSEMRRLISDEMVARIGIVGTPEECAQQIAARFGEHAGEVCCYFPGYTPRDADVADLIGALHRAPALP
>NZ_CP023147.1|WP_067167462.1|4688828_4689647_-|crotonase
MSDDLRVEVDSGVAVLTLNRPEHLNAYTAEMGALLSRAYRECDEDDGVRAIVVTGAGRTFCAGADFSGGASPFDAPADDGTFSASPITPAAFELRKPVIAALNGHAIGIGLTIALQADIRIVAEDAKYGVVQVRRGVIPDCMAHWTLTQLTTLGVAADILLTGRTFGGAEAVTLGIANRALPAEQVLEHALTVARDIAVNVAPMSAALCKRLLWDSAINRYTPRQVAALETQLHERVMGGADAGEGVAAFLDRRPPNFTARLSREWAPLPEP
>NZ_CP023147.1|WP_067167465.1|4688198_4688819_+|TetR/AcrR-family-transcriptional-regulator
MSRLERRKREVREKILTAAFDLFLDRGVAVTTIEEICEQADVANRTFFNHFATRQEMIRALAEQRLVNLHDVVFDRADEAIPARLVGVFDDIAATLAGSGDTYREMIGEMLATTGYGIQRGSNLHDTFVELVKEGVARGEVGARHDAQTLADIMVGALSGGILNWTLDRSYSLETNLHNLGVALAELLTSGAGPPRRRTRRADSGG
>NZ_CP023147.1|WP_095577868.1|4696807_4697281_+|hypothetical-protein
MGVVDGAVRSVGRTLNRAASVTTSTAGAVGGAAVNGVVGGIKGAADGIQHGISKGSKSTTAAAVGLGALGAIGLIEWPVLLAVGGGALVLQRIARQQKESAPPPRAKLTTVPTKPEPEPQPRKSPPQKAPTKRAAASKPAKKATGRRAGSAALRSTN
>NZ_CP023147.1|WP_095577869.1|4697302_4701748_+|cation-translocating-P-type-ATPase
MSITTSLRRSLPSRMIFAGLQATTDLARASIETSIDIATIPLREGAKALSGELTRATLRRHCWRGNSRAWIEVRGLADAADGPLGPTVLEAILAHPGVASAKLNYPLSRVVVDLDDPNTSLSDLCGVVEESENRCAPSQGADRPATASASLPGDGLVLATRAVTVAANAAGLGVALFGRATRLPRLPVTIAASITFFDYQPWLRRRLEDRIGGPATDTVMTLVQATSQTLSQSPTSLSLGLTMQSLKVAECRAEARAWEEHEPELARHADQPLTYRSPRPQPSRGMERAPGRFALLQALSAGAIGAGTRNLNMAATAVQVTTPKANRTTPEAFAATLGRGLAERHSVLPLRPESLRRLNKIDTILIDPRVLCTDTLRVARIRGASDSELAAAWSRAQLMLDNTGLRPGWRKVSGGRSDAQVEALFLPAHDPLASAVVGEANRAGAQLLTVDHESLDELRPAFDEVRPLKSGTDKAVDDALAAAVDDLQEAGRTVAVLSSTAAQAISSAHLALGVLPASGRAAPLWNADLLLPDLAAVWRVLHALPAAAAATQRGIGISAGATAMGSLFMIPGVRGNLGSETVNVGAAAGLLSGYLLARGILNADTPRPTATHEWHAMPVEQVRKALPEQDSPAPAPTERDTPAALRVAETPAQAVWQLAKAVRAELSDPLTPVMALGSAASAVLGSPVDAMLVGTVLTGNSILAAAQRLRAEKRLNYLLAQQVPPARKVVTGADGERTYALVDAAQLRPGDVIEVRTHEVVPADARVVEEVDVEVDESTLTGESLSVEKQVEATPGAPLAERRCMVFAGTTVVAGTAVALVTAVGPDTQQRRAADLISGELSSDIGLQHQLGQLTTKALPVSITGGALVGALGLLRRLPLQHAVGSAIAIAVAAVPEGMPLVATLAQASSARRLTKFGALVRVPRSVEALGRIEVVCFDKTGTLSENRLRVSQVHPAAGHSREEVLRCAVHAAPMTNGGTQVHATDVAIVEAGAEAASADGAAATPRTAHLPFRSGRSFSASVTGTELTVKGAPEVVLAASGDTGAMEGTVAELAAGGLRVIAVARRELTAQQARAIADNPDDIAEYCTSGLTLTGFLGLSDTPRATAKQLLGDLDGLGVGVKLITGDHPITAKAIAAELGLSVTADQVISGAEWEALSRKDQERVAAERVIFARMTPENKVQVVQALENADVRTAMVGDGANDAAAIRSATVGIGVVAHGSDPAHLVADVVLVDGRIEALMEAIREGHQLWRRVQSAVSVLLGGNAGEVIFAIIGSAITGTSPLNTRQLLLVNTMTDALPAAALAVSKPSGPIDPRLRGADQAALWQAVTIRGVTTAAATTAAWAMAGLSGPLSSPQRASTVALVALVGTELGQTLVESQAPLVVLTALGSLGLVGVLISTPGVSQLLGCTPLGPFGWAQGLGAAAAATVATGVLSRVLTGPDKSDPEPPSDLAEPPAPGSESRPPRRATTAHRVPVTAP
>NZ_CP023147.1|WP_095577870.1|4701869_4702145_+|hypothetical-protein
MAEKKSRRDTSQRDAVDKIREGETFVVNLPGIGQVEIPRPEQLAYFGGLAALAALELIDWPVAVVIAAGHLLASNHHNKLLEELGEAMEEV
>NZ_CP023147.1|WP_082991315.1|4702173_4702530_-|STAS-domain-containing-protein
MLAVEYEAHEDAIVVRVKGAVDSRTVGELAAHLATAVEQAATQPARPVIIDLQNVDFFGSAALNAVLDCHESGAARGTPVRLVADDDQVLRPIQVTELDRVFDIYPTLSDALQRGRQR
>NZ_CP023147.1|WP_067167435.1|4702665_4703373_-|ANTAR-domain-containing-protein
MQQRGRAAESSTDADGVRSSGPGETPAEYLTIGTFRFWFVGQRWEWSDEVARMHGYGPGDVEPTTQLLLSHKHPDDRAHVQELLDHALQSEGSFSSRHRFIDTAGTVHDAIVVADRMRDVSGAVVGTEGYYIDLTNTLDETRQEVLDEALPDLFESRAAIEQAKGVLMYVYRVSAEQAFRVLQWRSQETNVKLRALARQLLDELATLPAPAATVQSQFDHLLLTVHERISPEPAG
>NZ_CP023147.1|WP_163648926.1|4703592_4705221_+|phosphomethylpyrimidine-synthase-ThiC
MSGTTAPSVTTGPIAGSHKIYRDVAGGRVPFRRVDLSNGDHFDLYDTSGPYTDPDVTIDLAAGLPPRPGVIRDRGTQLQRARAGEITAEMAFIAAREGMPAELVRDEVARGRAVIPANHNHPEIEPMIIGKAFATKVNANIGNSAVTSSIAEEVDKMVWATRWGADTIMDLSTGKNIHETREWIMRNSPVPVGTVPIYQALEKVKGDPTELTWEMYRDTVIEQCEQGVDYMTVHAGVLLRYVPLTAKRVTGIVSRGGSIMAAWCLAHHRESFLYTNFDELCEIFARYDVTFSLGDGLRPGSIADANDAAQFAELRTLGELTKIAKSHGVQVMIEGPGHVPMHKIVENVRLEEEWCEEAPFYTLGPLATDIAPAYDHITSAIGAAIIAQAGTAMLCYVTPKEHLGLPDRKDVKDGVIAYKIAAHAGDLAKGHPHAQERDNALSQARFEFRWNDQFALSLDPDTAREYHDETLPAEPAKTAHFCSMCGPKFCSMRITQDVRDYAAKHGLDSEEAIEAAMSEGMAEKSREFAEHGNRVYLPLAQQ
>NZ_CP023147.1|WP_095577871.1|4705357_4706152_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MPLRVLSIAGSDSGGGAGIQADMRTMALLGVHACVAVTAVTVQNTVGVKSFHEIPEDVVAGQIEAVVSDIGIQAAKTGMLASPRIIDTVANTWRHLALTVPLVVDPVAASMHGDALMAPAALDSLRNQLFPLATLVTPNLDEVRLLVDIDVVDPASQRAAAKALHALGPQWVLVKGGHLRSSDRSCDLLYDGTSYHEFDAERIATGNDHGGGDTLASAAACALAHGFTVPDAVGFGKRWVTECLRASYPLGHGHGPVSPLFRLS
>NZ_CP023147.1|WP_067167427.1|4706151_4706781_+|alpha/beta-hydrolase
MTQHLDQIAGIAHEPDGAAKGVVVLTHGAGGNRDSPLLQQVCDEWAHRGWLAVRYNLPYRRRRPTGPPSGSAASDRAGIVEAIALCRGLGGGPLIAGGHSYGGRQTSMVVAAGEAPVDVLTLFSYPLHPPGKPERLRTEHLPDITVPTVFTHGTSDPFGTPDELRTAAALISGTTAVVEIASARHDLRSKTLNVPALAVDAALQLLGRK
>NZ_CP023147.1|WP_067167425.1|4706827_4707262_+|MarR-family-transcriptional-regulator
MDGISDSAVAAARDIRVVFSRLRRRLKDIAVDGLTPSQTAVLTRLWKEGPSSASVLAGAEQVRPQSMATILAALGQRGLIERSADPNDGRRQVVSLTAAGRKRAESDRRAREEWLARTIQERYTEAERRVIVDALSLLERLTEQ
>NZ_CP023147.1|WP_095577872.1|4707279_4708155_+|LLM-class-F420-dependent-oxidoreductase
MELGLHFIDFLPGDPARLGSTLADAAKAAEQGGATLFTLADHFFQMEELGPAQNPFLEGYTSLGFLAAQTSTIDLALLVTGVTYRHPGVLAKTVTTLDVLSQGRSMLGLGAAWYEREHTALGIPYPPLSARFEMLEETLQICRQMWSDDDGPYAGKHYRLNETICAPQPIRRPPILIGGDGEKKTLRLVAQYADIWNSMSNDVDELAHKVDVLRGHCDAVGRDSGDIRKTSGGLATTDPFENIDEYLKTAERFAALGVDMINVGPLPGNPDPVGFVRRLGDEVIPRLAEIG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023147_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023147_5

4993668-4993748

Orphan

Consensus_repeat	Method
AGTCATCGGCGCCGTTCCTCCTCATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023147_5

>merge|NZ_CP023147|5|4993668-4993748|CRISPRCasFinder
AGTCATCGGCGCCGTTCCTCCTCATCGCTGCGCTCTGCATCGTCACCGGCGCGAGTCATCGGCGCCGTTCCTCCTCATCGC

>NZ_CP023147|5|5|4993668-4993748|CRISPRCasFinder
AGTCATCGGCGCCGTTCCTCCTCATCGC	TGCGCTCTGCATCGTCACCGGCGCG
AGTCATCGGCGCCGTTCCTCCTCATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023147.1\|WP_095577972.1\|4989308_4989965_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP023147.1\|WP_067171393.1\|4985589_4985880_-\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224848
NZ_CP023147.1\|WP_083020379.1\|4987766_4988207_-\|SPW-repeat-protein	unknown	unknown	gnl\|CDD\|367653
NZ_CP023147.1\|WP_095577973.1\|4992414_4992927_-\|TIGR04338-family-metallohydrolase	unknown	unknown	gnl\|CDD\|275137
NZ_CP023147.1\|WP_095577979.1\|5001697_5002807_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378342
NZ_CP023147.1\|WP_095577980.1\|5003537_5004248_-\|mammalian-cell-entry-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_095577971.1\|4983067_4984108_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|240446
NZ_CP023147.1\|WP_083020378.1\|4988322_4989306_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|240081
NZ_CP023147.1\|WP_095577974.1\|4994710_4995742_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236196
NZ_CP023147.1\|WP_008261926.1\|4990112_4990259_+\|metallothionein-MymT	unknown	unknown	unknown
NZ_CP023147.1\|WP_095577975.1\|4995755_4997177_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023147.1\|WP_083020380.1\|4985988_4987701_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
NZ_CP023147.1\|WP_163648931.1\|4990300_4992376_-\|beta-glucosidase	unknown	unknown	gnl\|CDD\|224389
NZ_CP023147.1\|WP_095578329.1\|4999431_5000157_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP023147.1\|WP_067171395.1\|4984226_4985471_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP023147.1\|WP_167386432.1\|5002799_5003501_-\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP023147.1\|WP_095577977.1\|4998527_4999406_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP023147.1\|WP_095577976.1\|4997262_4998453_-\|dihydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|226326
NZ_CP023147.1\|WP_095577978.1\|5000214_5001618_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_CP023147.1\|WP_067171377.1\|4993796_4994630_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820

Protein	Function_ID	Function_description	E-value
NZ_CP023147.1\|WP_095577972.1\|4989308_4989965_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	2.28666e-61
NZ_CP023147.1\|WP_067171393.1\|4985589_4985880_-\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|224848	COG1937, COG1937, Uncharacterized protein conserved in bacteria [Function unknown].	4.77684e-32
NZ_CP023147.1\|WP_083020379.1\|4987766_4988207_-\|SPW-repeat-protein	gnl\|CDD\|367653	pfam03779, SPW, SPW repeat. A short repeat found in a small family of membrane-bound proteins. This repeat contains a conserved SPW motif in the first of two transmembrane helices.	6.20292e-08
NZ_CP023147.1\|WP_095577973.1\|4992414_4992927_-\|TIGR04338-family-metallohydrolase	gnl\|CDD\|275137	TIGR04338, hypothetical_protein, putative metallohydrolase, TIGR04338 family. This protein family is restricted to the Actinomycetales, including Mycobacterium, Rhodococcus, Nocardia, Gordonii, and others. The invariant motif HEXXH, at the core of the best conserved region in the protein, suggests metallohydrolase activity, as does local sequence similarity in this region to other metallohydrolases.	2.87759e-77
NZ_CP023147.1\|WP_095577971.1\|4983067_4984108_-\|L,D-transpeptidase	gnl\|CDD\|240446	cd13431, LDT_IgD_like_1, IgD-like repeat domain of mycobacterial L,D-transpeptidases. Immunoglobulin-like domain found in actinobacterial L,D-transpeptidases, including Mycobacterium tuberculosis LdtMt2, which is a non-classical transpeptidase that generates 3->3 transpeptide linkages. LdtMt2 is associated with virulence and resistance to amoxicillin. This domain may occur in a tandem-repeat arrangement and is found N-terminal to the catalytic L,D-transpeptidase domain; this model represents the first (N-terminal) repeat in LdtMt2 and related proteins.	1.73828e-23
NZ_CP023147.1\|WP_083020378.1\|4988322_4989306_+\|nitronate-monooxygenase	gnl\|CDD\|240081	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	7.8923e-53
NZ_CP023147.1\|WP_095577974.1\|4994710_4995742_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236196	PRK08241, PRK08241, RNA polymerase subunit sigma-70.	1.04176e-178
NZ_CP023147.1\|WP_095577979.1\|5001697_5002807_+\|hypothetical-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	0.0047695
NZ_CP023147.1\|WP_083020380.1\|4985988_4987701_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP023147.1\|WP_163648931.1\|4990300_4992376_-\|beta-glucosidase	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	1.43973e-79
NZ_CP023147.1\|WP_095578329.1\|4999431_5000157_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	8.12508e-74
NZ_CP023147.1\|WP_067171395.1\|4984226_4985471_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.35788e-73
NZ_CP023147.1\|WP_167386432.1\|5002799_5003501_-\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	8.53328e-28
NZ_CP023147.1\|WP_095577977.1\|4998527_4999406_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	8.25997e-15
NZ_CP023147.1\|WP_095577976.1\|4997262_4998453_-\|dihydrodipicolinate-reductase	gnl\|CDD\|226326	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown].	2.54036e-68
NZ_CP023147.1\|WP_095577978.1\|5000214_5001618_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	2.03757e-49
NZ_CP023147.1\|WP_067171377.1\|4993796_4994630_-\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	3.79662e-95

>NZ_CP023147.1|WP_095577973.1|4992414_4992927_-|TIGR04338-family-metallohydrolase
MSPGNSRRRDSQRSRAYAAEEFVRTLFDRATEHGSPAVDFFGTQLTLPPEGRFGSVASAQRYVDDVLALPAVRQRWPGVAPLRVRPRRAATAAHYENHDGTGVIAVPDRDTADWALRELVMLHEVAHHLCQAEPAHGPEFVATICELSELVMGPEVGHVLRVVYAKEGVR
>NZ_CP023147.1|WP_163648931.1|4990300_4992376_-|beta-glucosidase
MTDDERFSLLVSVMGAGDLWPVRDERIPADTPMSAGYVPGVPRLGVPPLRMSDAGLGVTNPGYRPGDTATALPAGLALAAGFDPALARSAGEVIGSEARSRGFNVQLAGAMNLARDPRNGRNFEYLSEDPLLTATMIAESIDGIQRHGVISTVKHYSLNCNESNRHFLDAVIDPDAHRESDLLAFEIAIERAQPGAVMTAYNKVNGVYAAANAVLINEVLKGAWAYRGWVMSDWGATPGWECALAGLDQECGAQIDALLWQAETFGAPLRDAYAEGRLPRERLSDMVRRILRSMFAVGIDAAAAPPEPDMAAHNEIALRIARQGAVLLTNRGALPLAPEPGQRIAVIGGYAHLGVPAGYGSSTVVPHGGYAGVVPIGGSGLEAGLRNLYLLPSSPLQELRNQLPQTQIEFDPGVSPAEAARAAQLADVAIVFAVRAEGEGYDLADLSLPWGQDEMIMAVAAANPNTVVVLETGNPVSMPWRAAVNAVVQAWYPGQAGARAIVGILTGRVNPSGRLPITFPVDLDQTPRPRLPGAGAPWGTASTIEYSEGADVGYRWYAGNGHVPMFAFGHGLSYTRFDYRDLVLTGGDTITASFSVVNVGDRAGADVPQLYVTAAPGGPCLRLLGFERVELEPGATRRVRIEADPRLLARYDSSVGSWRIEPGDYAAAVGISASAMRLAAAVELTGRTFGR
>NZ_CP023147.1|WP_008261926.1|4990112_4990259_+|metallothionein-MymT
MATYEAGTLLTCGHEGCGCRVRIEVPCHCSGAGEGYRCTCGDALTPVE
>NZ_CP023147.1|WP_095577972.1|4989308_4989965_-|O-methyltransferase
MSEKPTPHDVDAFLDSTVVGDDPALTAALEASNAAGLPPIAVSVQQGKFLSLLAGATGARRILEIGTLGGFSTIWLARGAGPQGRVVTLEYEPKHAEVARGNLERAGVAERVEVIVGAALDTLPTVTGPFDLIFIDADKENNLAYLEWAVRLARPGAVVVVDNVIRDGQILRPDSDDARVVATRKTLQAMGEHPRLDTAVIQTVGAKHWDGFALALVQ
>NZ_CP023147.1|WP_083020378.1|4988322_4989306_+|nitronate-monooxygenase
MDVTDRLRLDCPVGQAGMGGGLAGASLAAAVADAGGLGTLGIDTPRRLRASIDRVREQAPGRAVAVNLLLPFVHRHHVAVCVDARVDAVVLAFGEKRGLVEHLRDAGIFVFVMVGTEAQAGAAIACGADGLIAQGREAGGHLVGTVPALDFLPHALSAAGDRPVFLAGGIATAADTRAALDGGASGVIAGTRFLLTHEANASREYQRRILQADRTIETNLFGLSWPLRHRVVPNAATRRWCRPDGWAKAVPAALNAASRPVSALGYFDAGALMRLQSPALPFFTPLAPVAGVPDSRLDSVALYAGETALRIGELTSAGQAVADLSPR
>NZ_CP023147.1|WP_083020379.1|4987766_4988207_-|SPW-repeat-protein
MSTVHSSIDHHPDLLALRARYERVAESMSAHFTFGLALLTGLYVATSPWIVGFSATRSLATSDLIVGIAVAFLAYGFATTLDRAHGMTWTLPVLGVWVIVSTWILPDVALTTGMTWSNVVAGALLTFLGLNATYFGMRTRATGTHA
>NZ_CP023147.1|WP_083020380.1|4985988_4987701_+|dihydroxy-acid-dehydratase
MPTTDSARTADIKPRSRDVTDGLEKAAARGMLRAVGMGDEDFAKPQIGVASSWNEITPCNLSLDRLAKAVKEGVFSAGGYPLEFGTISVSDGISMGHEGMHFSLVSREVIADSVETVMQAERLDGSVLLAGCDKSLPGMLMAAARLDLASVFLYAGSILPGVAKLSDGSEREVTIIDAFEAVGACARGLMPREDVDAIERAICPGEGACGGMYTANTMASAAEALGMSLPGSAAPPATDRRRDGFARRSGAAVVELLRRGITARDILTKEAFENAIAVVMAFGGSTNAVLHLLAIAHEADVALTLDDFSRIGSKVPHLADVKPFGRHVMSHVDHIGGVPVMMKALLDAGLLHGDCLTVTGATVAQNLAEIAPPDPDGKVLRALSNPIHPTGGITILRGSLAPEGAVVKSAGFDSDVFEGTARVFDGERAALDALEDGTITKGDAVVIRYEGPKGGPGMREMLAITGAIKGAGLGKDVLLLTDGRFSGGTTGLCVGHIAPEAVDAGPIAFLRDGDRIRLDVANCVLDVLTDPAEFDSRRTGFTPPVPRYKTGVLAKYVKLVSSAAIGAVCG
>NZ_CP023147.1|WP_067171393.1|4985589_4985880_-|metal-sensitive-transcriptional-regulator
MTDEHGYSQQKDNYAKRLRRIEGQVRGIARMIEEDKYCIDVLTQVSAVNSALRSVALNLLDEHLSHCVTRAVAEGGAEADAKLTEASAAIARLVRS
>NZ_CP023147.1|WP_067171395.1|4984226_4985471_-|MFS-transporter
MTAETANAAARTWTPRIAAQLAILAAAAFTYVTAEILPVGALPAIARNLNVSLVLVGTLLSWYALVAALTTIPLVRWTAHLPRRRVLVVSLTCLTASQVISALAPNFAVLAAGRVLCAITHGLLWSVIAPIATRLVPPSHAGRATTSIYVGTSLALVVGSPLTAALSLMWGWRLAVVCVTVAAALVTVAARLMLPQMVLTEDQLAHVGPRSRHHRNPRLITVSVLAMIAVTGHFVSYTFIVELIRNVLGVRGPNLAWVLAAYGLAGLLSVPLVARPLDHRPKSAVILCMAGLTAAFVVLTALAFGGRSGATTALIGTAAIVLWGAMATAVSPMMQSAAMRNGADDPDGASGLYVTAFQVGIMAGSLAGGLLYEHSVTTMLIASAILMAVALVGIAANRRMLDVPQPPPTSSLDS
>NZ_CP023147.1|WP_095577971.1|4983067_4984108_-|L,D-transpeptidase
MSGWTKAWTFRGLFAALNVTGWGAVLTLALVLSAAPALADPEPAPGDPGAVAAPPGPPAPPDPFAPPPPPDPLAPPPPPDPVAAPPWVPPMAEPAAASAAGQNPAPFTGTAPFGPPKIQPANGSTVGVGQPIIINFPGRVDDAGAAEGAVHVSSVPAVPGKFYWMTPTQLRWRPLSFWPAHTAVTVDAGGTVSSFRTGDTLVATADDATHQLTVTRNGTVEKTIPMSMGMTSGNHQTPNGTYYVQDKKASVVMDSSTYGVPVSSTYGYKVTVEDAVRFDNVGDYVHSAPWSVDDQGKRDVSHGCINISPSNAKWFFDNFGAGDPIIVKNSTGGSYKKNDGSADWMN
>NZ_CP023147.1|WP_067171377.1|4993796_4994630_-|alpha/beta-hydrolase
MNRTERSFDGFGGVRIVYDVWTPDTAPRAVLVLAHGLGEYARRYDHVAQRFGEAGLVTYALDHRGHGRSGGKRALVRDIHEYTADFDTLVGIATREHHGLKCIVLGHSMGGGIVFAYGVERPDNYDLMVLSGPAVAAQDQVSPLLALAAKVLGAIVPGLPAQDLDVDAISRDPAVVAAYKDDPLVYHGKVPAGIGRALLQVGETMPRRAPALTAPLLVVHGSDDRLIPVAGSHRLVECVGSTDVELKVYPGLYHEVFNEPEREQVLDDVVSWITARL
>NZ_CP023147.1|WP_095577974.1|4994710_4995742_+|sigma-70-family-RNA-polymerase-sigma-factor
MSSPASGWHHHPAEYPAPSPVVGADFSAQAEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYDRFEGKSSLRTWLHRIATNTCLSALEGKARRALPVGLGAPSADPTAELVERREVPWLEPLPTSTDDPSDPSVVVGSRESVRLAFVAALQYLPPRQRAVLLLRDVLQWRSAEVAEAVGTTTTAVNSLLQRARSQLDAVDPNVDDRLAPPDSPEAQDLLARYIAAFETYDIDRLVALFTAEAIWEMPPYAGWYRGAADIVTLIHQQCPAEASGDMRLLPLVANGQLAAAMYMRAGDVHVPFQLHVLDLHGDKVSHVVAFLDDTLFTKFGLPGSLSAGHQ
>NZ_CP023147.1|WP_095577975.1|4995755_4997177_+|hypothetical-protein
MPSSTAQVTAAPGRPLLLLSAYDLADVGYQVEEFFVSATATSYTPVTELGPDGRWDVTPSGSADFTTRIVVLTPTDPARFNGTVLVEWLNVSGGIDAPAVWMMAHREIIRAGYAYVGVSAQRVGIEGGDSLLGADMSLKSQDPQRYAPLHHPGDAFSYDIFSQIGDLLNSANHRDLVRDLPVQRVIALGESQSAMFLTTYINAVDPLARSYDGFLVHSRFGSAAPLDGTSIFAETEEPQGVAFRPELRVPLLTVVTETDVFGGARQGYYFARQPDNQHLRVWEIAGAAHADNYTIQVAFIDSGSAPLADIAAAYAPTNMLMGQQLAHCINFGPQHHYVVQAGLAALNAWVASGEPAPSAEPLAARETPGPQPVPDDNGVARGGLRTPWVDVPVARTSGLGGEESIMSMIFGSGELFDAATLRGLYPGGSTEYLERFTGALDAAIGAGFILPADREEILQLAAATYPGRGKNQG
>NZ_CP023147.1|WP_095577976.1|4997262_4998453_-|dihydrodipicolinate-reductase
MLKVGVWGPGSMGVVALRGVIDHPELQLVDVVVHSDAKAGRDAGELCGIAPVGVVATQDPTAMLAGDADAVVYAAGANLRPLDAVEDMVSILRAKKNVVSCSVVPLVFPDGVDAAFTEPLRQAAIEGGVSFFTTGIDSGFANDVLPLVLTGVSRVIDSVRVTEMFNYATYPDRSAVYEILGFGQPPDYPAFAAQPGIFTFGWGPVLHQLAAGLGVKIDNIEEANERVSAGESFDTPTGRIAAGTIAAMRSTLTGYVGGKPTFVLDHVTRMRDDIAPDWPQPRICIEPKDLGYGLASGRGLYRVEIEGSPSMRCEFEMAEDHDHDLGARIAGSSRMVNAIPAVCAAPPGLLSALDLPLITGTGLVRPVPGPPPDSRLFSRGDGERRNSASEEPGSRT
>NZ_CP023147.1|WP_095577977.1|4998527_4999406_+|MarR-family-transcriptional-regulator
MAQERSESRAKSPPTARVMDVLAALANSPGGLTSAELAKRCAISTSTCALVLAELERGAWVARRGDRRYALGSGLFGLVHGLREQFPLLDRGRDALRFLHDTLGAGCSMSKIGARHLTTVDTVGHGTDGEHAVGQRFPIDPPFGLVAMAWRDEDFIATWLHRVMPRLTRAEITDHQRVLADIRARGYGAWRFDDTHQSLHNRLAEVLSSLEPTAQVTRQLTTLMTMVTLRSVTDVLETDLPTAEFVVLPIFSPAGQPEYQIEIHLGHATGLTLSELDAALRHAQGLLTAAVG
>NZ_CP023147.1|WP_095578329.1|4999431_5000157_+|pirin-family-protein
MSATTEIRRAADRAVTTTPWLTSRHSFSFGDHYDPGNTHYGLLLVNNDDIVAPGTGFDTHPHRDMEIVTWVLRGELSHHDSTGNRGVIYPGLAQRMSAGSGIMHSERNDSPSEPVHFVQMWVVPDESGIDPSYQQYEIDQKLLDDNLVTIASGSPADDAAITLHNRSAALHVARLRAGTTVALPAAPYLHLFLAHGRIRVEGIGELNEGDALRFADADGRHVAASEPSELLIWEMHAKLGD
>NZ_CP023147.1|WP_095577978.1|5000214_5001618_+|YhgE/Pip-domain-containing-protein
MPHSHPQHAAPNPKHNIKAIRTVRFWAAPLIITLALMSALCALYLGGILNPSTNLRHFPIAVVNEDAGPGGAQITDRLVNGLDKNKFDVRVLSRGEAKQQLDTGQVYGSVVIPVSFSSKLRDFATSAVVPTRAERPSITVSTNPRAGTLGASIAGQTLSMAMGMANGIAGQRVMSEVAAQTGGAPLPGAAQVGLAAPIEIQSVVYNPLPNGTGNGLSAFYYALLLLLAGFTGSIVVSTLVDALLGYVPAEFGPVYRFAEQVRISRFQTLLLKWAMMVLLALLTSAVYLWIADALGMPIDLSWQLWAFGVFAIAAVGITSSSLLSVLGTAGMLVSMLIFVILGLPSAGATVPLEATPSFFRWLAEFEPMHQVFLGARSLLYFGGRADAGLAQALIMTSVGLVIGLLLGGIVTHLYDRKGFHRIQGAVALAIAQEHQAQHKARRGKQAEAVVTESEPVVTEPESSSEQT
>NZ_CP023147.1|WP_095577979.1|5001697_5002807_+|hypothetical-protein
MQIMAERAIVVTRRASFRRLAACCTALLAWFTLGVTSGQPLARAADGRDLLANAIGGTRGSYLVYNFGAGHPAPMLNAGGSWYEMNNGGHLMIIKNAAGRLSPHLLVDTHQGDQARCENNPGARTGEGLWQASELYAPLQAWQRMGQPTIAINANFFDVRGQKGGSWRQTGCSSPLGAFVDNTNGRGRANQAVTGTLAYPGKQGLSGGGESWSALTTMILPSGGAPYVVWPRTKKDYDAATPVVQDLLNKNERFVAVSGIGLLAPGNTGQLHDGGPSAARTALAYSRQKDEMYIFEGGSYTPDNMQDLFRGLGSDNAVLLDGGGSSAIVLRRDTGGMWAGAGSPRGSCDTRQVLCDSHERALPSWLAFN
>NZ_CP023147.1|WP_167386432.1|5002799_5003501_-|DUF1275-domain-containing-protein
MAVTSPVSQRSTVAALLLLTFATGLADSISILVLGHVFVANMTGNVIFLGFWLAPRTSIDLTAVVVALPTFVCTTVLSGRLSRHFGERTRAWITTVLATEIALLVALAILAGAGVLPYQRNSTLIMIGMLAVTFGLQHSSARQFGIPELSTTVLTSTIVSLGLDSRLAGGTGERQRLRIGVVVTMCAGAFVGATMSRYVVAPVFVVAAAVIATSLLIFRFGPAAARNTAAVAS
>NZ_CP023147.1|WP_095577980.1|5003537_5004248_-|mammalian-cell-entry-protein
MEDQQPATGDLTAEDNPAGPEDEATAAAPDDAEATEDAETTEDGEATEDAADATEAPPPAKRKRRLAGKAWAIVALVAALLFVGSAGFAGAMVQPYLADRAVAETKLNVARTAARAITTLWTYTPENMDTLADRASAYLSGDFAAQYRKFVDAIVAPNKQAKITNSTEVTGAAVESLDDNNAVVIIYTNTTSTSPLTKNVPSLKYLSYRLFMKRQKSHWLVTRMTTITSLDLTPKT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP023147.1	428904-428932	1	0.966
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP023147.1	1255898-1255926	2	0.931
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP023147.1	1886632-1886656	2	0.92
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP023147.1	3397566-3397590	2	0.92
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP023147.1	3397619-3397643	2	0.92

1. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to position: 428904-428932, mismatch: 1, identity: 0.966

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccggcttcgccgcgcttgcgatcgccgcg	Protospacer
********.********************

2. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to position: 1255898-1255926, mismatch: 2, identity: 0.931

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccggctttgccgcgcttgcgatcgccgcg	Protospacer
*******..********************

3. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to position: 1886632-1886656, mismatch: 2, identity: 0.92

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
tgcgctctgcatcgccgccggcgcg	Protospacer
**************.*.********

4. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to position: 3397566-3397590, mismatch: 2, identity: 0.92

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
tgcgctctgcatcgtcgccgccgcg	Protospacer
****************.*** ****

5. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to position: 3397619-3397643, mismatch: 2, identity: 0.92

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
tgcgctctgcatcgtcgccgccgcg	Protospacer
****************.*** ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	492091-492120	2	0.933
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	509632-509661	2	0.933
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NC_028954	Rhodobacter phage RcRhea, complete genome	18803-18827	3	0.88
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NC_042049	Rhodobacter phage RcCronus, complete genome	18721-18745	3	0.88
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NC_014918	Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence	378157-378186	4	0.867
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	492096-492124	4	0.862
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	509637-509665	4	0.862
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	588514-588538	4	0.84
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_LR594668	Variovorax sp. SRS16 plasmid 3	499080-499104	4	0.84
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	25136-25160	4	0.84
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	62259-62283	4	0.84
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	476036-476060	4	0.84
NZ_CP023147_5	5.1\|4993696\|25\|NZ_CP023147\|CRISPRCasFinder	4993696-4993720	25	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	252165-252189	4	0.84
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	LR606151	Rhizobium sp. Q54 genome assembly, plasmid: 8	32093-32121	5	0.828
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_021209	Sinorhizobium sp. M14 plasmid pSinA, complete sequence	39929-39957	5	0.828
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP039909	Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence	414408-414436	5	0.828
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	751528-751557	6	0.8
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	784219-784248	6	0.8
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	117481-117510	6	0.8
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	373948-373977	6	0.8
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	MT708548	Streptomyces phage Salutena, complete genome	20200-20229	6	0.8
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	MH669016	Streptomyces phage TrvxScott, complete genome	22522-22551	6	0.8
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	MK392363	Streptomyces phage Bowden, complete genome	22540-22569	6	0.8
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP039918	Agrobacterium tumefaciens strain CFBP6626 plasmid pAtCFBP6626a, complete sequence	231682-231710	6	0.793
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_019959	Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence	62616-62644	6	0.793
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_007961	Nitrobacter hamburgensis X14 plasmid 3, complete sequence	19701-19729	6	0.793
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	50420-50449	7	0.767
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	73373-73402	7	0.767
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	297979-298008	7	0.767
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	813755-813784	7	0.767
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4849823-4849852	7	0.767
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	999317-999346	7	0.767
NZ_CP023147_2	2.1\|1859659\|32\|NZ_CP023147\|CRISPRCasFinder	1859659-1859690	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	1276178-1276209	7	0.781
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	387148-387176	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1354400-1354428	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	347680-347708	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1316579-1316607	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP013523	Rhizobium phaseoli strain R744 plasmid pRphaR744a, complete sequence	100414-100442	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1420623-1420651	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5945153-5945181	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1623658-1623686	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	972392-972420	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	382151-382179	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	972392-972420	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	919355-919383	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	97815-97843	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	981191-981219	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1000220-1000248	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	728026-728054	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	631895-631923	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1040423-1040451	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	263507-263535	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	581032-581060	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	633401-633429	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	385254-385282	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1472853-1472881	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1249146-1249174	7	0.759
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1354406-1354434	7	0.759
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	MH617421	Microviridae sp. isolate ctch900, complete genome	3297-3326	8	0.733
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	966271-966300	8	0.733
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1492853-1492882	8	0.733
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	7727-7756	8	0.733
NZ_CP023147_4	4.1\|4695802\|29\|NZ_CP023147\|CRISPRCasFinder	4695802-4695830	29	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	420135-420163	8	0.724
NZ_CP023147_1	1.1\|424215\|30\|NZ_CP023147\|CRISPRCasFinder	424215-424244	30	NZ_AP017657	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence	35286-35315	9	0.7
NZ_CP023147_2	2.1\|1859659\|32\|NZ_CP023147\|CRISPRCasFinder	1859659-1859690	32	NZ_CP053911	Hymenobacter sp. BRD128 plasmid unnamed3, complete sequence	20330-20361	10	0.688

1. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 2, identity: 0.933

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgatcgcaagcgcggcgcagccgggcgcg	Protospacer
****************** **********

2. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 2, identity: 0.933

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgatcgcaagcgcggcgcagccgggcgcg	Protospacer
****************** **********

3. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NC_028954 (Rhodobacter phage RcRhea, complete genome) position: , mismatch: 3, identity: 0.88

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
cgcgccctgaatcgtcaccggcgcg	Protospacer
.****.*** ***************

4. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NC_042049 (Rhodobacter phage RcCronus, complete genome) position: , mismatch: 3, identity: 0.88

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
cgcgccctgaatcgtcaccggcgcg	Protospacer
.****.*** ***************

5. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NC_014918 (Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence) position: , mismatch: 4, identity: 0.867

-gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
aacgacc-caagcgcggcgaagccgagcgcc	Protospacer
 .***.* *****************.*****

6. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 4, identity: 0.862

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccggctgcgccgcgcttgcgatcgcctct	Protospacer
****** *.***************** *

7. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 4, identity: 0.862

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccggctgcgccgcgcttgcgatcgcctct	Protospacer
****** *.***************** *

8. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.84

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
cacgctcggcatcgtcaccgccgcg	Protospacer
..***** ************ ****

9. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NZ_LR594668 (Variovorax sp. SRS16 plasmid 3) position: , mismatch: 4, identity: 0.84

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
tgcgctctggatcggcaccggcggc	Protospacer
********* **** ********

10. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 4, identity: 0.84

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
cacgctcggcatcgtcacccgcgcg	Protospacer
..***** *********** *****

11. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 4, identity: 0.84

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
gccggtctgcctcgtcaccggcgcg	Protospacer
  ** ***** **************

12. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.84

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
cacgctcggcatcgtcaccgccgcg	Protospacer
..***** ************ ****

13. spacer 5.1|4993696|25|NZ_CP023147|CRISPRCasFinder matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 4, identity: 0.84

tgcgctctgcatcgtcaccggcgcg	CRISPR spacer
cacgctcggcatcgtcaccgccgcg	Protospacer
..***** ************ ****

14. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to LR606151 (Rhizobium sp. Q54 genome assembly, plasmid: 8) position: , mismatch: 5, identity: 0.828

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccgtcttcaccgcgcttccgatcgagtcg	Protospacer
*** ************* ******   **

15. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_021209 (Sinorhizobium sp. M14 plasmid pSinA, complete sequence) position: , mismatch: 5, identity: 0.828

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccgtcttcaccgcgcttccgatcgagtcg	Protospacer
*** ************* ******   **

16. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 5, identity: 0.828

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccgtcttcaccgcgcttccgatcgagtcg	Protospacer
*** ************* ******   **

17. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcctcggccagcgcggcgaagccgggggcc	Protospacer
**  . ** ***************** ***

18. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 6, identity: 0.8

gcgatcgcaagcgcggcgaagccgggcgcc-	CRISPR spacer
gatttcgcaaccgcggcgaagcc-ggcgtcg	Protospacer
*   ****** ************ ****.*

19. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gcgatcgca----agcgcggcgaagccgggcgcc	CRISPR spacer
----ccgcactacagcgcggcgaaggcgggcgcc	Protospacer
    .****    ************ ********

20. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.8

gcgatcgcaagcgcggcgaagccgggcgcc-	CRISPR spacer
gatttcgcaaccgcggcgaagcc-ggcgtcg	Protospacer
*   ****** ************ ****.*

21. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to MT708548 (Streptomyces phage Salutena, complete genome) position: , mismatch: 6, identity: 0.8

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgctgaacagcgcggtgaagccgggcgcc	Protospacer
*** * .  *******.*************

22. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to MH669016 (Streptomyces phage TrvxScott, complete genome) position: , mismatch: 6, identity: 0.8

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgctgaacagcgcggtgaagccgggcgcc	Protospacer
*** * .  *******.*************

23. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to MK392363 (Streptomyces phage Bowden, complete genome) position: , mismatch: 6, identity: 0.8

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgctgaacagcgcggtgaagccgggcgcc	Protospacer
*** * .  *******.*************

24. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP039918 (Agrobacterium tumefaciens strain CFBP6626 plasmid pAtCFBP6626a, complete sequence) position: , mismatch: 6, identity: 0.793

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccgtcttcaccgcgcttccgatcgagtcc	Protospacer
*** ************* ******   *

25. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_019959 (Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence) position: , mismatch: 6, identity: 0.793

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
gcgcgctcaccgcgctcgcgatcgccgcc	Protospacer
 **  .**********.***********

26. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_007961 (Nitrobacter hamburgensis X14 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.793

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccttcgtcaccacgcttgcgatcgccggc	Protospacer
**  * *****.***************

27. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 7, identity: 0.767

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
aaagacccaagcgcggcgaagccgagcgcc	Protospacer
. .. * *****************.*****

28. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 7, identity: 0.767

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
aaagacccaagcgcggcgaagccgagcgcc	Protospacer
. .. * *****************.*****

29. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
accgtcgaaagcgcggcgaagccggccgag	Protospacer
.* .*** ***************** **

30. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgtcgcggagcgcggcgaagccgggagcc	Protospacer
*** .   .***************** ***

31. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
ctgaacgcgagcgcggcgaagccggaaacc	Protospacer
 .** ***.****************. .**

32. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgtcgcggagcgcggcgaagccgggagcc	Protospacer
*** .   .***************** ***

33. spacer 2.1|1859659|32|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

ggctgatggtggcgacccgctgcgcccggcta-	CRISPR spacer
ggcggagggtggcgacccgctgc-tctggcagc	Protospacer
*** ** **************** .*.*** .

34. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

35. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

36. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
tcatcatccccgcgcttgcgatcgccggc	Protospacer
.*. * ** ******************

37. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

38. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP013523 (Rhizobium phaseoli strain R744 plasmid pRphaR744a, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
gcggcttcaccgcgcttgtgatggggctg	Protospacer
 *****************.*** *   .*

39. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

40. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
ccggcctcaccgcgcttgcgacggcacta	Protospacer
*****.***************. **  ..

41. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

42. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
gcggcttcaccgcgcttgtgatggggctg	Protospacer
 *****************.*** *   .*

43. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

44. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
gcggcttcaccgcgcttgtgatggggctg	Protospacer
 *****************.*** *   .*

45. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

46. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
cgatcttcaccgcgctcgggatcgccggc	Protospacer
* . ************.* ********

47. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
cacctctcaccgcgcctgcgatcgccccg	Protospacer
*   ..*********.********** **

48. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

49. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

50. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

51. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

52. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

53. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

54. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

55. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

56. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

57. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

58. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.759

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
atgtcttcaccgcgctttcgatcaccggc	Protospacer
 .* ************* *****.***

59. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to MH617421 (Microviridae sp. isolate ctch900, complete genome) position: , mismatch: 8, identity: 0.733

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
gcgatcgcgagcgcgtcgaagccgtttaat	Protospacer
********.****** ********  .. .

60. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.733

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
ccgatcgcaagcgaggcgatgccgatcagg	Protospacer
 ************ ***** ****. *.

61. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.733

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
ccgatcgcaagcgaggcgatgccgatcagg	Protospacer
 ************ ***** ****. *.

62. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 8, identity: 0.733

gcgatcgcaagcgcggcgaagccgggcgcc-	CRISPR spacer
agcgtcgcgagcgcggcgaagcc-ggcgtag	Protospacer
.  .****.************** ****.

63. spacer 4.1|4695802|29|NZ_CP023147|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

ccggcttcaccgcgcttgcgatcgccgcg	CRISPR spacer
cgctgctcaccgcgcttgcgatggccgga	Protospacer
*    .**************** **** .

64. spacer 1.1|424215|30|NZ_CP023147|CRISPRCasFinder matches to NZ_AP017657 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence) position: , mismatch: 9, identity: 0.7

gcgatcgcaagcgcggcgaagccgggcgcc	CRISPR spacer
tcgatcgcgagcgctgcgaagccgtataga	Protospacer
 *******.***** ********* ...

65. spacer 2.1|1859659|32|NZ_CP023147|CRISPRCasFinder matches to NZ_CP053911 (Hymenobacter sp. BRD128 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ggctgatggtggcgacccgctgcgcccggcta	CRISPR spacer
gtaaaccggtcgcgaaccgctgcgcccggcac	Protospacer
*   . .*** **** **************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

623240 : 680502

Streptococcus_phage(18.18%)

protease,integrase,bacteriocin,tRNA

attL 664798:664843|attR 682819:682864

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067174695.1\|623240_624038_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_095576506.1\|624034_625045_-	Dyp-type peroxidase	NA	NA	NA	NA
WP_082991545.1\|625268_626579_+	M18 family aminopeptidase	NA	NA	NA	NA
WP_067174688.1\|626567_627191_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_095576507.1\|627341_628415_+	phosphotransferase	NA	NA	NA	NA
WP_067174682.1\|628472_630770_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	4.2e-270	63.1
WP_095576508.1\|630828_631467_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_095576509.1\|631404_632619_-	MCE family protein	NA	NA	NA	NA
WP_083014762.1\|632638_633028_+	hypothetical protein	NA	NA	NA	NA
WP_067174674.1\|633165_634692_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	2.3e-46	29.9
WP_008263904.1\|634758_635853_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	7.9e-57	37.9
WP_067174670.1\|635920_636106_-	DUF3073 domain-containing protein	NA	NA	NA	NA
WP_095576510.1\|636252_637347_-	folate-binding protein YgfZ	NA	NA	NA	NA
WP_095576511.1\|637469_638357_+	aminodeoxychorismate lyase	NA	NA	NA	NA
WP_095578090.1\|638617_639256_-	FABP family protein	NA	NA	NA	NA
WP_067174630.1\|639451_639754_-	DUF1416 domain-containing protein	NA	NA	NA	NA
WP_095576512.1\|639755_640589_-	sulfurtransferase	NA	NA	NA	NA
WP_067174625.1\|640616_641096_-	DUF4395 domain-containing protein	NA	NA	NA	NA
WP_167386441.1\|641320_641740_-	thioredoxin family protein	NA	NA	NA	NA
WP_095576513.1\|641807_642620_-	mannan chain length control protein LmeA	NA	NA	NA	NA
WP_083014778.1\|642789_643578_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.0e-15	32.5
WP_095576514.1\|643574_644504_+	mycothiol synthase	NA	NA	NA	NA
WP_095578092.1\|644668_645793_+	phosphate ABC transporter substrate-binding protein PstS	E3SKK5	Synechococcus_phage	1.2e-23	32.4
WP_067174609.1\|645844_646879_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_067174606.1\|646875_647790_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_067174602.1\|647802_648579_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-16	34.0
WP_067174598.1\|648605_649274_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_095576515.1\|649332_651447_-	transcriptional regulator	NA	NA	NA	NA
WP_083014791.1\|651657_652791_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_067174588.1\|652798_653821_-	acyl-ACP desaturase	NA	NA	NA	NA
WP_095576516.1\|653974_654589_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_067174581.1\|654656_655718_+	DUF2236 domain-containing protein	NA	NA	NA	NA
WP_082991537.1\|655739_655943_-	zinc transporter Slc39a7	NA	NA	NA	NA
WP_095576517.1\|655987_656395_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	1.6e-07	32.6
WP_067174574.1\|656435_656936_-	nucleoside deaminase	S4VYZ2	Pandoravirus	8.6e-11	33.3
WP_067174571.1\|657054_657954_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_157746172.1\|658198_659278_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5S7K9	Streptococcus_phage	7.4e-07	25.1
WP_157746173.1\|659286_661251_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	5.1e-06	36.5
WP_139803738.1\|661237_661639_+	hypothetical protein	NA	NA	NA	NA
WP_095576520.1\|661669_662584_+	hypothetical protein	NA	NA	NA	NA
WP_095576521.1\|662580_663138_+	hypothetical protein	NA	NA	NA	NA
WP_095576522.1\|663147_663876_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA
664798:664843	attL	NA	NA	NA	NA
WP_012396382.1\|664875_666033_-\|integrase	site-specific integrase	A0A0E3XBN7	Gordonia_phage	7.1e-32	30.1
WP_012396381.1\|666033_666264_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009954443.1\|666274_667621_-	cell division protein FtsK	NA	NA	NA	NA
WP_012396380.1\|667617_668040_-	hypothetical protein	NA	NA	NA	NA
WP_012396379.1\|668139_668934_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_012396378.1\|669011_669440_+	NUDIX hydrolase	NA	NA	NA	NA
WP_031349047.1\|669510_670110_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_080677207.1\|670515_671127_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_012396375.1\|671172_671595_+	hypothetical protein	NA	NA	NA	NA
WP_014941273.1\|671710_672604_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_033724522.1\|672618_675546_-	RND family transporter	NA	NA	NA	NA
WP_012396371.1\|676487_677174_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_031349045.1\|677186_678380_-	cytochrome P450	NA	NA	NA	NA
WP_012396369.1\|678446_679028_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_012396368.1\|679453_679795_-	hypothetical protein	NA	NA	NA	NA
WP_012396367.1\|679848_680502_-\|protease	CAAX amino protease	NA	NA	NA	NA
682819:682864	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3836700 : 3843780

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_067175193.1\|3836700_3837168_+	VOC family protein	A0A2K9L121	Tupanvirus	8.6e-13	33.8
WP_095577583.1\|3837195_3839361_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	2.5e-208	51.5
WP_067175094.1\|3839330_3839783_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	7.6e-14	39.3
WP_064936759.1\|3839815_3840055_-	redoxin NrdH	V5UN81	Mycobacterium_phage	2.6e-21	64.5
WP_067175091.1\|3840582_3841137_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.6e-05	34.4
WP_067175088.1\|3841228_3841843_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_067175190.1\|3841851_3842904_+	DNA polymerase IV	F1C5A5	Cronobacter_phage	7.1e-23	29.6
WP_095577584.1\|3842838_3843780_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	9.3e-06	29.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023147

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection