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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022880 Brucella abortus strain MC chromosome 2, complete sequence 1 crisprs DEDDh,csa3,cas3 0 0 97 0
NZ_CP022879 Brucella abortus strain MC chromosome 1, complete sequence 1 crisprs csa3,WYL,DEDDh 0 1 1 0

Results visualization

1. NZ_CP022880
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022880_1 975034-975134 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2679 1 Ochrobactrum_phage(100.0%) NA NA
DBSCAN-SWA_2 7180 : 8640 2 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 17374 : 18157 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_4 21877 : 23056 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_5 28015 : 30429 2 Cedratvirus(50.0%) NA NA
DBSCAN-SWA_6 40431 : 41790 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_7 54997 : 56533 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_8 91813 : 92710 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_9 103438 : 104616 1 Shigella_phage(100.0%) transposase NA
DBSCAN-SWA_10 108538 : 110573 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_11 128310 : 130310 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_12 134744 : 136711 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_13 141807 : 142884 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_14 147196 : 151693 6 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_15 155491 : 159919 3 Dishui_lake_phycodnavirus(33.33%) NA NA
DBSCAN-SWA_16 171060 : 172890 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_17 180834 : 185668 5 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_18 191424 : 192264 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_19 203520 : 204279 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_20 207684 : 214638 8 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_21 223775 : 225308 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_22 238156 : 241569 2 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_23 249445 : 262767 15 Acanthocystis_turfacea_Chlorella_virus(16.67%) holin NA
DBSCAN-SWA_24 266070 : 270253 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_25 282032 : 283622 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_26 289047 : 290583 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_27 294145 : 295474 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_28 311073 : 315032 4 Only_Syngen_Nebraska_virus(50.0%) NA NA
DBSCAN-SWA_29 318379 : 319312 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_30 325383 : 336316 12 Klosneuvirus(40.0%) tRNA NA
DBSCAN-SWA_31 342089 : 350125 5 Indivirus(25.0%) NA NA
DBSCAN-SWA_32 359777 : 361322 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_33 373101 : 378807 3 Liberibacter_phage(100.0%) NA NA
DBSCAN-SWA_34 382721 : 383279 1 Geobacillus_phage(100.0%) NA NA
DBSCAN-SWA_35 398199 : 399057 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_36 405236 : 409207 3 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_37 416648 : 418234 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_38 427005 : 427662 1 Bacteriophage(100.0%) NA NA
DBSCAN-SWA_39 435991 : 443870 7 Planktothrix_phage(40.0%) NA NA
DBSCAN-SWA_40 455060 : 456596 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_41 465427 : 468530 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_42 471722 : 473553 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_43 476597 : 477593 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_44 489861 : 492660 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_45 501642 : 507099 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_46 514622 : 521935 5 Burkholderia_virus(33.33%) NA NA
DBSCAN-SWA_47 531463 : 537972 5 Planktothrix_phage(66.67%) NA NA
DBSCAN-SWA_48 544289 : 546950 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_49 550535 : 552191 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_50 556777 : 561891 4 Moraxella_phage(50.0%) NA NA
DBSCAN-SWA_51 568283 : 569746 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_52 575920 : 576724 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_53 592959 : 616768 21 Bacillus_phage(18.18%) NA NA
DBSCAN-SWA_54 622209 : 624309 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_55 634233 : 637525 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_56 652072 : 653635 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_57 663297 : 665736 3 Stx2-converting_phage(66.67%) transposase NA
DBSCAN-SWA_58 671030 : 676310 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_59 683407 : 685018 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_60 688770 : 694058 4 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_61 698252 : 699254 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_62 708887 : 712303 2 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_63 724496 : 725633 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_64 730347 : 731235 1 Paenibacillus_phage(100.0%) NA NA
DBSCAN-SWA_65 737441 : 738158 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_66 744265 : 745033 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_67 755827 : 760616 5 Caulobacter_phage(33.33%) NA NA
DBSCAN-SWA_68 764314 : 765202 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_69 784667 : 798569 12 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_70 811870 : 813433 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_71 817341 : 829456 9 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_72 847104 : 848172 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_73 853338 : 859296 5 Mycobacterium_phage(40.0%) NA NA
DBSCAN-SWA_74 862398 : 863400 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_75 871696 : 875431 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_76 882652 : 885837 3 Phage_TP(50.0%) NA NA
DBSCAN-SWA_77 889056 : 889497 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_78 892802 : 893798 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_79 900044 : 901895 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_80 907181 : 908009 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_81 911739 : 912660 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_82 921446 : 922259 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_83 931749 : 932925 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_84 948876 : 950748 1 Wolbachia_phage(100.0%) NA NA
DBSCAN-SWA_85 954267 : 954519 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_86 961010 : 975052 11 uncultured_virus(33.33%) tRNA NA
DBSCAN-SWA_87 980392 : 986620 6 Tupanvirus(66.67%) tRNA NA
DBSCAN-SWA_88 1015486 : 1019957 5 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_89 1025637 : 1026618 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_90 1045386 : 1047953 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_91 1057618 : 1058752 1 Bovine_gammaherpesvirus(100.0%) NA NA
DBSCAN-SWA_92 1065170 : 1069639 5 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_93 1074593 : 1086880 11 Streptococcus_phage(20.0%) NA NA
DBSCAN-SWA_94 1111303 : 1111774 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_95 1118806 : 1123012 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_96 1126057 : 1131870 6 Synechococcus_phage(20.0%) NA NA
DBSCAN-SWA_97 1142512 : 1150051 7 Tupanvirus(33.33%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP022879
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022879_1 1786091-1786179 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP022879_1 1.1|1786117|37|NZ_CP022879|CRISPRCasFinder 1786117-1786153 37 NZ_CP020810 Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence 75259-75295 8 0.784

1. spacer 1.1|1786117|37|NZ_CP022879|CRISPRCasFinder matches to NZ_CP020810 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

gtcgatccgaccgctgttccggccaatggcagtcttg	CRISPR spacer
atcgatccgaccgctgttcctgccgatggcgaacccg	Protospacer
.******************* ***.*****.. *..*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 75684 : 87597 13 uncultured_Mediterranean_phage(90.0%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage