CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016766	Lactobacillus agilis strain La3, complete genome	4 crisprs	cas3,c2c9_V-U4,Cas14u_CAS-V,cas14k,csa3,cas14j,WYL,DinG,DEDDh	1	5	11	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016766_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016766_1

858268-858430

Orphan

Consensus_repeat	Method
TAAATATTTACATTCCTCTTAAGTTAAATAGAATC	PILER-CR
TATTTACATTCCTCTTAAGTTAAATAGAATC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP016766_1

>merge|NZ_CP016766|1|858268-858430|PILER-CR,CRISPRCasFinder
TATTTACATTCCTCTTAAGTTAAATAGAATCGGCACGACCATGTAGCACTTCGGGCAGTTTTTAATATTTACATTCCTCTTAAGTTAAATAGAATCCCGTTCGCTGGTTTGGCTGTTGATTCCCTTCATAATTATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|1|1|858268-858430|PILER-CR
TATTTACATTCCTCTTAAGTTAAATAGAATCGGCA	CGACCATGTAGCACTTCGGGCAGTTTTTAA
TATTTACATTCCTCTTAAGTTAAATAGAATCCCGT	TCGCTGGTTTGGCTGTTGATTCCCTTCATAAT
TATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|1|1|858268-858430|CRISPRCasFinder
TATTTACATTCCTCTTAAGTTAAATAGAATC	GGCACGACCATGTAGCACTTCGGGCAGTTTTTAA
TATTTACATTCCTCTTAAGTTAAATAGAATC	CCGTTCGCTGGTTTGGCTGTTGATTCCCTTCATAAT
TATTTACATTCCTCTTAAGTTAAATAGAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016766.1\|WP_094129374.1\|846052_847900_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP016766.1\|WP_082174241.1\|867267_867726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129398.1\|863386_864238_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180840
NZ_CP016766.1\|WP_094129401.1\|864359_864983_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239398
NZ_CP016766.1\|WP_094129389.1\|861264_862122_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|378975
NZ_CP016766.1\|WP_050612249.1\|850132_851050_-\|glycine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|236473
NZ_CP016766.1\|WP_094129380.1\|853382_854348_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_CP016766.1\|WP_094129392.1\|862223_862859_-\|DUF998-domain-containing-protein	unknown	unknown	gnl\|CDD\|377627
NZ_CP016766.1\|WP_094129404.1\|865031_865937_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP016766.1\|WP_050612250.1\|851523_853284_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235784
NZ_CP016766.1\|WP_094129368.1\|843355_844138_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_CP016766.1\|WP_094129395.1\|862929_863412_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|377783
NZ_CP016766.1\|WP_094129386.1\|858710_859421_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP016766.1\|WP_094129407.1\|866066_867158_-\|glycerol-dehydrogenase	unknown	unknown	gnl\|CDD\|341450
NZ_CP016766.1\|WP_094129371.1\|844124_844829_-\|tRNA-(adenine-N(1))-methyltransferase	unknown	unknown	gnl\|CDD\|225258
NZ_CP016766.1\|WP_094129377.1\|848052_850131_-\|glycine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234925
NZ_CP016766.1\|WP_056976603.1\|844899_846039_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
NZ_CP016766.1\|WP_050612253.1\|857911_858094_+\|DUF2929-domain-containing-protein	unknown	unknown	gnl\|CDD\|371396
NZ_CP016766.1\|WP_056976762.1\|859762_861157_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP016766.1\|WP_094129383.1\|854476_857782_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|223660

Protein	Function_ID	Function_description	E-value
NZ_CP016766.1\|WP_094129374.1\|846052_847900_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	3.09849e-171
NZ_CP016766.1\|WP_094129398.1\|863386_864238_-\|hypothetical-protein	gnl\|CDD\|180840	PRK07105, PRK07105, pyridoxamine kinase; Validated.	7.74496e-48
NZ_CP016766.1\|WP_094129401.1\|864359_864983_+\|hypothetical-protein	gnl\|CDD\|239398	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidines. This sub-family includes bacterial carbonic anhydrase alpha, as well as plant enzymes such as tobacco nectarin III and yam dioscorin and, carbonic anhydrases from molluscs, such as nacrein, which are part of the organic matrix layer in shells. Other members of this family may be involved in maintaining pH balance, in facilitating transport of carbon dioxide or carbonic acid, or in sensing carbon dioxide levels in the environment. Dioscorin is the major storage protein of yam tubers and may play a role as an antioxidant. Tobacco Nectarin may play a role in the maintenace of pH and oxidative balance in nectar. Mollusc nacrein may participate in calcium carbonate crystal formation of the nacreous layer. This subfamily also includes three alpha carbonic anhydrases from Chlamydomonas reinhardtii (CAH 1-3). CAHs1-2 are localized in the periplasmic space. CAH1 faciliates the movement of carbon dioxide across the plasma membrane when the medium is alkaline. CAH3 is localized to the thylakoid lumen and provides CO2 to Rubisco.	1.06298e-35
NZ_CP016766.1\|WP_094129389.1\|861264_862122_-\|metallophosphoesterase	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	1.21642e-13
NZ_CP016766.1\|WP_050612249.1\|850132_851050_-\|glycine--tRNA-ligase-subunit-alpha	gnl\|CDD\|236473	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP016766.1\|WP_094129380.1\|853382_854348_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_CP016766.1\|WP_094129392.1\|862223_862859_-\|DUF998-domain-containing-protein	gnl\|CDD\|377627	pfam06197, DUF998, Protein of unknown function (DUF998). Family of conserved archaeal proteins.	0.000920269
NZ_CP016766.1\|WP_094129404.1\|865031_865937_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	8.05055e-46
NZ_CP016766.1\|WP_050612250.1\|851523_853284_-\|pyruvate-kinase	gnl\|CDD\|235784	PRK06354, PRK06354, pyruvate kinase; Provisional.	0
NZ_CP016766.1\|WP_094129368.1\|843355_844138_-\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	1.72918e-87
NZ_CP016766.1\|WP_094129395.1\|862929_863412_-\|ECF-transporter-S-component	gnl\|CDD\|377783	pfam07155, ECF-ribofla_trS, ECF-type riboflavin transporter, S component. This family is the substrate-binding component (S component) of the energy coupling-factor (ECF)-type riboflavin transporter. It is a transmembrane protein which binds riboflavin, and is responsible for riboflavin-uptake by cells.	8.28429e-28
NZ_CP016766.1\|WP_094129386.1\|858710_859421_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.06542e-46
NZ_CP016766.1\|WP_094129407.1\|866066_867158_-\|glycerol-dehydrogenase	gnl\|CDD\|341450	cd08171, GlyDH-like, Glycerol dehydrogenase-like. This family contains glycerol dehydrogenase (GlyDH)-like proteins that have yet to be characterized, but show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent; the zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.	1.53831e-160
NZ_CP016766.1\|WP_094129371.1\|844124_844829_-\|tRNA-(adenine-N(1))-methyltransferase	gnl\|CDD\|225258	COG2384, COG2384, Predicted SAM-dependent methyltransferase [General function prediction only].	8.69298e-75
NZ_CP016766.1\|WP_094129377.1\|848052_850131_-\|glycine--tRNA-ligase-subunit-beta	gnl\|CDD\|234925	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated.	0
NZ_CP016766.1\|WP_056976603.1\|844899_846039_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP016766.1\|WP_050612253.1\|857911_858094_+\|DUF2929-domain-containing-protein	gnl\|CDD\|371396	pfam11151, DUF2929, Protein of unknown function (DUF2929). This family of proteins with unknown function appears to be restricted to Firmicutes.	1.29911e-11
NZ_CP016766.1\|WP_056976762.1\|859762_861157_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.18819e-50
NZ_CP016766.1\|WP_094129383.1\|854476_857782_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|223660	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair].	0

>NZ_CP016766.1|WP_050612253.1|857911_858094_+|DUF2929-domain-containing-protein
MGKQLTILFWGFIYGEVLGYIVSALSGYTFDAKLSGLIPMIGGFIVINCLSYFVKDSQEK
>NZ_CP016766.1|WP_094129383.1|854476_857782_-|DNA-polymerase-III-subunit-alpha
MFSPLQVISSYSLLQSGLRIEDYVQAAKKLGYQALALTDYNVMYGALTFYQACLRANIKPLVGITLQLTSSQSDLITSDIVLLAKNAAGYQNLMKLSSLKLAKPEGVSLTLEQVDANLSDLIVILPPNLTYLIASNPAANLTWLTALKARVASNLYFGIEANFDEFSKQTLIKLAEQLDCKLVASLRVEYLEPKDILQQEVLAALKSGRTLKEADLQGKQRGKHYLKSPTQVEAEYEQAGLTEAYANVAGLCQQVDLQLEFTKTKLPHFKTPSGLDSESYLRKLCVEGLDVKLRKAAVSATKPYFDRLESELAVINKMGFDDYFLIVADITNFARSQKIMLDPGRGSAAGSLVAYSLGITDVDPLKYQLLFERFLNEKRAQMPDIDIDLPDNRRDEVISHLKKQYGQNHLAQIITFDTFGARQALRDVGRVLELNSFELERWSQAIPRVFKISLKEAYEQSRSLRNLVNDSPKNKLLFRLALSLEGLPRHYSKHAAGIILSDTDLVETVPLHMGNDGIWLSQYAKKQVEAVGLLKIDLLGLRNLSLLEQALSLVKRGYQTELDVRQIDLNDELTLQLFARGDTAGVFQFESSGIRNVLRKLRPTSFEDIAAVNALYRPGPLTNIDEFIARKHGLKQVTYPNDNLKSILGLTYGIIVYQEQVMQVASTMAGFTLGEADILRRAISSKNDHLILELKDQFIKGAKKLGYEVSVAKQVYDYIERFANYGFNRSHAVAYSKFAFQLAYIKAHYPAAFYTALFNSLLASPKIREYVIEAKKYQVNVKGPNINLSQKGFTLRQGQIYFGLASIKKIRRDFCDAILLERRQAGNYKGFQDFLERIPEKYRQAALIEPLIYVGAFDEFEPNRKQLLTNLESQLKTIELTDSPVLQSLLETVDRPVEPFSLEEQLDKESEYLGLVISGHLLQKYSWIKTFYPVTAVGDLQVNMKTRLLVYIRKIKVIRTKNNEEMAFLTGSDESGEVDLTLFPTEFRRYGLRLKKGQSLLVSGEVQEHNGLSFIVKQIKFADLMKKTCWYLRLTPENNALAKLKLTSTLRANHGETPVIIYDESAGTKRLLHERYWLSTDAGLEAELINLLGQENVVLKK
>NZ_CP016766.1|WP_094129380.1|853382_854348_-|6-phosphofructokinase
MKRIGILTSGGDSQGMNAAVRAIARSAMHAGLEAYGVNYGYKGLVEGDVFKMDSLNDLDGIINRGGTILRSARFPEFAEEETQLKAIEQLKKLGIDALVVIGGDGSYHGAMKLTKHGFNSIGVPGTIDNDIPGTDFTIGFDTAVGVATEALDRIIDTARSHQRIFVVEVMGRGAGDIALWSGISAGADAIVIPERDFDAKEIAAKLTDNKKRGKDYGIVVVAEGVMSAQELKDQIDQYGDFDSRAVTLAHVQRGGMPTAKDRVLASRFGDYAVQLLLEGKGGLAVGIRDNQLVAKDIIDTLENHKHKTDVSLADLNDRIRF
>NZ_CP016766.1|WP_050612250.1|851523_853284_-|pyruvate-kinase
MKKTKIVSTLGPASSDLDTIVKLIEAGANVFRFNFSHGDHEEHLGRMNLVRQAEKVTGKMVGIMLDTKGAEIRTTVQKEGKLHFNIGDEVRISMDASIEGTKEKIAVTYPGLYDDVHEGGHVLFDDGLIDMQIEKKDEATKELVCKVLNEGTLGSRKGVNAPGVSINLPGITEKDSDDIRFGLDNEINFIAASFVRKPQDVLDIRELLEEKHMEHVQIFPKIESQEGIDNFDEIIKVSDGLMIARGDMGVEIPAENVPLVQKSLIKKCNALGKPVITATQMLDSMQENPRPTRAEASDVANAVFDGTDATMLSGESANGDYPVEAVATMARIDVKAENALRQHREFSLNRFDKTDVTEAIGRAVAEAANNLNIKVIVAATKSGHTARMISKYRPDADILAVTFDDRTRRGLAINWGVYPVMAEAPASTDEMFALATEEAKKAGFAKEGDLILITAGVPVGEKGTTNVMKIQLIGSKLVEGQGVGDETVIGKAVVATSAKEAVEKAEEGGVLVVKTTDKDYLPAIEKSAALVVENGGLTSHAAVVGISMGIPVVVGAANATELVADGEVITVDSRRGIVYHGASNAL
>NZ_CP016766.1|WP_050612249.1|850132_851050_-|glycine--tRNA-ligase-subunit-alpha
MTKKLAMQDIILTLQQFWAKQGCMLMQAYDTEKGAGTMSPYTFLRAVGPEPWNVAYVEPSRRPADGRYGDNPNRLFQHHQFQVIMKPSPSNIQELYLDSLRALGIVPEEHDIRFVEDNWENPSMGCAGVGWEIWLDGMEITQFTYFQQVGGLEVKPVAAEVTYGLERLSSYIQDVNSVFDLEWADGVKYGDIFKEPEYEHSKYAFEESNQEMLFKAFDVYETEAKKQIANGLVHPAYDYILKCSHTFNLLDARGAVSVTERAGYLARIRNMAKAVAKVFVAERKKLGYPLIKDEKLRQELLKEDK
>NZ_CP016766.1|WP_094129377.1|848052_850131_-|glycine--tRNA-ligase-subunit-beta
MAHTFLLEIGLEEIPAHVVTPSVEQLVTKVKNFLKEERLEFEAVKAYSTPRRLAVKVLGLADKQADIKEEAKGPAKKIALDADGNWTKAAQGFVRGQGMTTDDIFFKEIKGVEYVHVEKFIAGKQAAEILPKLKEVAMSLKFPTMMRWGSNDFEYVRPIKWLVALLDQEVVPFAILDVKTDRLSQGHRFLGKPVSFASADDYPEALVKEMVIADAAERKNMIRNQIATLAKENDWVVDVDEDLLEEVNNLVEYPTVFAGKFADKYLEVPDVVLITSMKDNQRYFYVRNKAGKLLPFFIAVRNGNKAYLENVVAGNEKVLTARLEDAKFFYQEDQKQTIAQYVERLKTVMFHDKIGTIYQKMQRVQLLAANLGQKLGFTEEQLADLKRAAMIYKFDLVTGMVGEFSELQGIMGEIYARMQGEKETVAKAMSEEYMPTSAEGKLPASPVGALLSIADKLDSIYAFFAAGMIPSGSNDPYALRRQALGIVRIALDQNWNLAVTDLSQAIKAAYKADASLFEKIVPTDSQAEMESFILDRLHQVLAADKYSHDTLDTVVAVKANSFVTSQKAAAVLTKHRADTDFKETIEALTRVVRLAKKAPNFAADAKVDASLFENESEVALQAAVAQVKEQFSADVAADYELLRKLRQPISTYFDQTMVMAKDEVIKNNRLLQLSQLADLTTIFGQLDKLNVK
>NZ_CP016766.1|WP_094129374.1|846052_847900_-|DNA-primase
MRGDSQLSLIPAEVIDRVRTSVNILDVVGQSVQMHKSGKNWFGLCPFHPEKTPSFSVNEEKQIFTCFSCHRGGNVFKFLMELNGVTFPEAVKQVAQIAGIEIATDVGQTAAEKNSPRQKLYQLYNRAADLYHHVLINTKLGQEAFSYLQDRGLSLELIKEFRIGFAPEQPLLEELFKKEEASDYQLVRKSGLFLEWQDGSLHERFVDRIMFPINNQAGQVVAFSGRLLHANPQAPKYLNSPETAIFNKSKVLFNFDKAKGEIRLKQRVILFEGFMDVLAAYRSGVKNGVASMGTSLTDEQVYQLKRLTNQVCICYDGDDPGQLATKRALELFESQGSFNLSVINLPENLDPDEYVKKYGEEKFAQAVAANQVGALDFYLQYFERGKNLATENDQLLYLRQVLEVLAPLKDKIQQDLYLNRLSKRFKLEKLNLEAQLRDLQTKLKVQTKPLTDLKTSAVVPPVEKQAKVSQVITAQRLLLYRLLHEQGVFLRLMADAQFHFFTEIYQRSYLVAQAYFAQHEDYNSAEFLDFIKEEPIRQLVVSLEMTEFPPQALPEEIDDCIIIITKLAPLLAKLDQNDQEFERAMSLGNTEEAQRLLVEKIKLKQQIAQVKQALH
>NZ_CP016766.1|WP_056976603.1|844899_846039_-|RNA-polymerase-sigma-factor-RpoD
MAEEKKNNNFDEVAYNKRLREVIRAYKPKKEISYTELTNQLVKPFGLDADQMDKLIGRIEDAGISVVDENGNPSEASLMAADKEAKEAKEDAEKEEEETASTVKINDPVRMYLKEIGRVNLLTADEEVQLALRIEEGDEEAKQRLAEANLRLVVSIAKRYVGRGMSFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQMLQDLGREPTPEEIGAEMDMPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPAEHAAYELLKEQLESVLDTLTDREENVLRLRFGLDDGGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE
>NZ_CP016766.1|WP_094129371.1|844124_844829_-|tRNA-(adenine-N(1))-methyltransferase
MDARKLSNRLLTAAKYVKAGAVLADIGSDHAYLPAYLALNKQIKFGIAGEVVKGPFENAQHEIKKEGLVGKVEARLADGLAAIELTDQVDTITICGMGGPLIASILEKGKAKLVNHPRLILQPNVGEKEVRKWLMQAGYAIMAEEILAEDGHTYELIVADYAPAEAHLNEQALMFGPLLMQAKNPVFISKWRQEILKQEEILTHLEQAKVVPLAKKAQILATIKEIEGVLNGIS
>NZ_CP016766.1|WP_094129368.1|843355_844138_-|Nif3-like-dinuclear-metal-center-hexameric-protein
MVLVKELVTEFERFAPKELAMPKDPVGLQLGFLEQEVTKMMVTLDVRPETVAEAIANGCDFIFAHHPAVFRPIQPFDLAQPQNQMYAEILKHNITVYAAHTNLDCAAGGMNDWLAMALDLQAVKPLREDGLGRIGSLAAEMTVADFAAYCKQVFKLQGLRVISADLNAKVKRVAVLGGAGGSFYEAALAQGADAYVTGDISYHTGHDVLAAGLNVFDVGHHVESICKPHLKSLFEQIIRQKGWNLPVIESKLNTDPFIFC
>NZ_CP016766.1|WP_094129386.1|858710_859421_-|DeoR/GlpR-transcriptional-regulator
MSVTFVKLAHHFGIAFDTARRDVLKLTSTGQAVRIHGGLMEVKLNNVPGFVTRIHIQSPIKAKMAKLASQEVHPGGLYFIGASTTLMQMCELLGRVNTTVVTNSIDNAIRLTLHELPAVELLGGKIDKGNRYTYSLETLAKLDNYTFDAAFLGTSKIQADGITIVDAYDATIIKKVIARSKKVVLVVQKYKFEAQNSSPYKSADLKDIDVLITDEPLSAQYRAYFKPDLKVKYVKD
>NZ_CP016766.1|WP_056976762.1|859762_861157_-|MFS-transporter
MNETVSRKTNISVASVGILTFTGILIETSLNVTFPTLMSTFNEPLAVVQWLTTGYLLMVTLMMGATAFLLKRFKARRLFLVASSLAIIGGILCLFAPEFWLLMLGRLLQAAATGIATPLMFSVVFNKVPAKKWGTYTGICAMLISLAPALGPTYGGIMNHYLTWRYCFVFVVILLGLALVAGLLNFEDNETYPQTKFNLLSFIYLISFLTSLEFGLQQLSSRLGLAVGLIILSLVCLALFIFRSLTKANPLIDLRILKDSYVSWRLVDYFGLQFTNISLSFIIPIFAENYLHVNSLVAGLMLLPGSLAGAIIAPLSGRWYDKSGANKPIPLGNFLMLLGAVLFAGLTKQLTVALIVIFYIFTRAGFNTAFGNVMTDSGKAVPLAKKADQNSLFSMSQQYAGSLGTAIISGILTFAQKGSNTSLQAIKVGSQLSFGFLAIISFIGLLSVIILHKRHVPAKKQFDK
>NZ_CP016766.1|WP_094129389.1|861264_862122_-|metallophosphoesterase
MTRKIGIFSDVHGNYTALKAVYEDALALGVDDFWFLGDLFSPGPGAQDLWELFTQMNPSYCLRGNWDDLLVNSIAGRLPTDKESKIYFAKLAQTLAKRLAPEVVMEIERWPLAKQVELAGLKVGLSHNLPTFNHGQALYPLADQANFDQLFESKPDLDLAVYAHVHHPLMRYSSQEQLIFNPGSVGQPFSQHPIFQADLRANYLVLTLAEKKLTEVDFRKVDYDHQAELKRAQAVELPYLDLYEEQLESGRIHSHDYELLAKINTERGYRQDVLAYNQAKKRFKN
>NZ_CP016766.1|WP_094129392.1|862223_862859_-|DUF998-domain-containing-protein
MRRLMREYSFLLILIVLIREISLPYFMGFFSANSKIQLLSELGSNKFPFHQAFDRWEFIDGILFMLGAYYIYLWAQRQAASRYAKPLALLVALYGLGDCLLTSMFVYSGSTFANWHSFLHSIASVLGYLGLYLANLLIAKIKHDNRFLVAVIGVSQLLSLGLNLLMESPLVTKASTVGLLQCVALDLMYLPLLILACLELHHKLALIRVRN
>NZ_CP016766.1|WP_094129395.1|862929_863412_-|ECF-transporter-S-component
MILMTSLTKKIALLGIITAANVVIARTFLIPIPFTHGNINLCDAGIVLAALLFGSRAGGVVGALSGLLLDLISGYPQYMFFSLLAHGTEGYIIGQLGQKKQWLGLLAGTLVMVTVYFGADSFLYTVPTGLVGIPLNLLQGVIGVTVGYLLVVGLNKRLAF
>NZ_CP016766.1|WP_094129398.1|863386_864238_-|hypothetical-protein
MVEINKTFLLAADLAGIGSMSLNSAVTIMQIFGVNLALSPTVLLSTQSEGFGKTAKLNTAVFLQHSFSHWHQIGQEFSGALVAYYEDEQVGALLKQWLVTTKPPLVIYDPACADQGALYPNISVELLSQKKELLTLADVICPNLTEASLLTGIKSAESKPELYMKLLQALATSNPRADIVITGISLGEKRGCVWLDQDKLQYALTPTLASHFYGAGDVFSALLSGFLLRGLSFSKAIRVTTNLLYSTLVANLNSDRADSYGLDLSSLLAEFILRKDDFNDIIN
>NZ_CP016766.1|WP_094129401.1|864359_864983_+|hypothetical-protein
MSKLDYQLQDQWPRLSNLESPINIATPTCQFKSVADQPLTVNLTSGPVKKKNQVNGPQFLLTGTIQLGKRTYFLQKMHFHDGSEHYLNQRPAKCELHFVCQDAKKHTLVLALLANISGEAPKRNWDSLYKGQATTSAFCNFFEKQLAYYQYQGSLTTPPLLPDVTWVVLAQPATITPSDYQVIHQDYPDNHRQLQDLKQRTITYYAY
>NZ_CP016766.1|WP_094129404.1|865031_865937_-|AEC-family-transporter
MAIFLQVMVPVLLIYLSGFLLQKALKLDIKPISTLAMYLLLPFLVFKTFYERKLDSNFGYILVITLVIMLALLGLGLIIANILHYNQKKLNAFLLTTIFSNSGNFGVPLALFAFGNSAMKYAMPIMIIHTIYMGVVGIYIAASGSGKQQTIGYALGSVFKQPMNYVIVPGILLNRWGITLPENLMKWIDMISKTAIPIIMLALGMQLANVVASKIDWTSVGFASFVKLIVAPLLAYLICLAFPINPLLRNIIVIMTAMPSAANTTIYAIQYNAEPDYVSACTFVSTILSFISLTFLLNLVV
>NZ_CP016766.1|WP_094129407.1|866066_867158_-|glycerol-dehydrogenase
MTTNCMSNYSYGPNCFDELPAILAGYGFTKVVFIGGKRALASSQTEVKQVLSQANVEVTASLVYGVESTQANIDRLVATEEVAAADVIFGFGGGKALDTAKMVAMELAKPIFTFPTICSNCSAGTAVAVIYHDDGSFDRYGFPPVPLHVFINTQVIANAPAKYFWAGIGDGISKAPEVAHCVAHAKETGMELPHTATLGAAIAASSKGAFYQYGPQGIADVKNNLASRAVEEVALDIVVSTGYASNLVNQKEFYFNSCHAHAFYNATTAIKREGEYLHGQIVSFGVLVLHAYYQEDEELQRVLAFNHRLGLPVTLAQLGLSQADIPKLVEVAMTTNEYKHLLFEPDQFAAAIKQADELGQALS
>NZ_CP016766.1|WP_082174241.1|867267_867726_-|hypothetical-protein
MLEKIRLRKPLDQKVAVGDMITYQTTSFIIINILDVGLASWGKESIFAVYTCLVQQLNSPNLSENYTTTQTELAYELNEQRNISRVGDIIYDENTGIWVQVNAILAIRYEDEKIYVKYEFDPIPEWSPKEISKLQDKRRLQLMKLVKHEQKR

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Crispr_ID: NZ_CP016766_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016766_2

957574-957937

Orphan

Consensus_repeat	Method
ATTTACATTCCTCTTAAGTTAAATAGAATC	PILER-CR
ATTTACATTCCTCTTAAGTTAAATAGAATC	CRISPRCasFinder
ATTTACATTCCTCTTAAGTTAAATAGAATC	CRT

5 spacers

The CRISPR arrays of NZ_CP016766_2

>merge|NZ_CP016766|2|957574-957937|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTCCTCTTAAGTTAAATAGAATCCGTTTAGAACGTCCCAAAACATTATAAAACCCTATCTAATTTACATTCCTCTTAAGTTAAATAGAATCAGGCAAGCAAGCATTAACCGGGCGCAAGGTTATCTAAATTTACATTCCTCTTAAGTTAAATAGAATCAGCACGGCATTATTAAACGCTCTTGTGATTTTCTTTATTTACATTCCTCTTAAGTTAAATAGAATCTTGGTTTTGACCTCAACAGATACGCAGCACTGGTAAGATTTACATTCCTCTTAAGTTAAATAGAATCGTTTTAGGTGATGATAGACAGAAATGGGCTAAATTCATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|2|2|957574-957937|PILER-CR
ATTTACATTCCTCTTAAGTTAAATAGAATC	CGTTTAGAACGTCCCAAAACATTATAAAACCCTATCTA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGGCAAGCAAGCATTAACCGGGCGCAAGGTTATCTAA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGCACGGCATTATTAAACGCTCTTGTGATTTTCTTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	TTGGTTTTGACCTCAACAGATACGCAGCACTGGTAAG
ATTTACATTCCTCTTAAGTTAAATAGAATC	GTTTTAGGTGATGATAGACAGAAATGGGCTAAATTC
ATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|2|2|957574-957937|CRISPRCasFinder
ATTTACATTCCTCTTAAGTTAAATAGAATC	CGTTTAGAACGTCCCAAAACATTATAAAACCCTATCTA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGGCAAGCAAGCATTAACCGGGCGCAAGGTTATCTAA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGCACGGCATTATTAAACGCTCTTGTGATTTTCTTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	TTGGTTTTGACCTCAACAGATACGCAGCACTGGTAAG
ATTTACATTCCTCTTAAGTTAAATAGAATC	GTTTTAGGTGATGATAGACAGAAATGGGCTAAATTC
ATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|2|1|957574-957937|CRT
ATTTACATTCCTCTTAAGTTAAATAGAATC	CGTTTAGAACGTCCCAAAACATTATAAAACCCTATCTA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGGCAAGCAAGCATTAACCGGGCGCAAGGTTATCTAA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGCACGGCATTATTAAACGCTCTTGTGATTTTCTTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	TTGGTTTTGACCTCAACAGATACGCAGCACTGGTAAG
ATTTACATTCCTCTTAAGTTAAATAGAATC	GTTTTAGGTGATGATAGACAGAAATGGGCTAAATTC
ATTTACATTCCTCTTAAGTTAAATAGAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016766.1\|WP_094129584.1\|953135_953948_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|379207
NZ_CP016766.1\|WP_094129624.1\|965054_965405_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_CP016766.1\|WP_094129581.1\|952245_953139_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP016766.1\|WP_094129612.1\|961408_962383_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227316
NZ_CP016766.1\|WP_094129578.1\|950794_952123_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349930
NZ_CP016766.1\|WP_094129587.1\|954914_955451_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP016766.1\|WP_089145063.1\|954018_954918_-\|transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP016766.1\|WP_094129596.1\|956706_956907_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129576.1\|949626_950811_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP016766.1\|WP_094129599.1\|956899_957151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129606.1\|960114_960708_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP016766.1\|WP_094129593.1\|956183_956564_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376573
NZ_CP016766.1\|WP_094129602.1\|958827_959943_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP016766.1\|WP_094129627.1\|965571_966021_+\|phage-terminase-small-subunit-P27-family	unknown	unknown	gnl\|CDD\|377461
NZ_CP016766.1\|WP_094129590.1\|955723_956182_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379252
NZ_CP016766.1\|WP_094129615.1\|962441_964133_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273716
NZ_CP016766.1\|WP_094129618.1\|964201_964432_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129621.1\|964431_964761_+\|head-tail-adaptor-protein	unknown	unknown	gnl\|CDD\|377521
NZ_CP016766.1\|WP_094129609.1\|960878_961133_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP016766.1\|WP_094129629.1\|966022_967735_+\|terminase-large-subunit	unknown	unknown	gnl\|CDD\|226974

Protein	Function_ID	Function_description	E-value
NZ_CP016766.1\|WP_094129624.1\|965054_965405_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	1.43137e-08
NZ_CP016766.1\|WP_094129581.1\|952245_953139_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.00095e-33
NZ_CP016766.1\|WP_094129612.1\|961408_962383_+\|hypothetical-protein	gnl\|CDD\|227316	COG4983, COG4983, Uncharacterized conserved protein [Function unknown].	8.97148e-15
NZ_CP016766.1\|WP_094129587.1\|954914_955451_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.20275e-05
NZ_CP016766.1\|WP_089145063.1\|954018_954918_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.69006e-34
NZ_CP016766.1\|WP_094129584.1\|953135_953948_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|379207	pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.	7.04062e-08
NZ_CP016766.1\|WP_094129576.1\|949626_950811_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.77022e-83
NZ_CP016766.1\|WP_094129578.1\|950794_952123_-\|hypothetical-protein	gnl\|CDD\|349930	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine. This family includes Sso-CP2 from Sulfolobus solfataricus.	3.43363e-104
NZ_CP016766.1\|WP_094129606.1\|960114_960708_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.97465e-14
NZ_CP016766.1\|WP_094129593.1\|956183_956564_+\|hypothetical-protein	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.77885e-05
NZ_CP016766.1\|WP_094129602.1\|958827_959943_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.21757e-36
NZ_CP016766.1\|WP_094129627.1\|965571_966021_+\|phage-terminase-small-subunit-P27-family	gnl\|CDD\|377461	pfam05119, Terminase_4, Phage terminase, small subunit.	1.03152e-19
NZ_CP016766.1\|WP_094129590.1\|955723_956182_+\|hypothetical-protein	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.08517e-06
NZ_CP016766.1\|WP_094129615.1\|962441_964133_+\|hypothetical-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	3.4693e-34
NZ_CP016766.1\|WP_094129621.1\|964431_964761_+\|head-tail-adaptor-protein	gnl\|CDD\|377521	pfam05521, Phage_H_T_join, Phage head-tail joining protein.	3.7705e-10
NZ_CP016766.1\|WP_094129609.1\|960878_961133_+\|hypothetical-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	5.41488e-05
NZ_CP016766.1\|WP_094129629.1\|966022_967735_+\|terminase-large-subunit	gnl\|CDD\|226974	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only].	4.18117e-94

>NZ_CP016766.1|WP_094129599.1|956899_957151_-|hypothetical-protein
MIRTGILEDLGYFSTSPKIYNRDDNFRITIINSHSGVVLGKYDETEEKEVLLARKSSFKVVKYFLEERSDNKLVPIIEVVENE
>NZ_CP016766.1|WP_094129596.1|956706_956907_-|hypothetical-protein
MNKKPYSDRRWYDADFETVKNLKPLKHSEEYKKNAKAFFSGLYDREFKEEDLPIELQTSKKEDTNC
>NZ_CP016766.1|WP_094129593.1|956183_956564_+|hypothetical-protein
MIQLYGRRWQIETYFKATKQYLRFDKTQVQNYDDLCGHLTIVMMTYDLLAWQELQEKDERTIGDLFYIMGETMPDLKLTDVLVWFIKLLNRLVESEPMAPIKQLNETVDKFISSLPQSIASQLQKA
>NZ_CP016766.1|WP_094129590.1|955723_956182_+|hypothetical-protein
MSSKDPKSILGPCHNLDRRSLAGCRRYQAQSKMNQVAVELVSQALKHNIPAQYVLFDSWYSSPKMFDQIKQLGLDGIGMLKRSAKVYYRYRGRLYSVKRLYERLRSEQRSSKATYQYSCVVKSDSGIELRLVFIRNQRKVNNYLVLSISSPR
>NZ_CP016766.1|WP_094129587.1|954914_955451_-|transposase
MTKYSPEFKAQVVVEYMTDGLSSYTLEKKYKVSARQIRKWIQQYQLQGIKSFKQHHRKRIFSAKFKWHVINYYQTHAESFAQVAAKFDLLPSQISIWRQAFIKYGYDALKPHRKGRSQKVKKQTKKQKQKLVEKKEIDQLREELARTKQELYNTKMDRDILKKSLALFGPSKPGKKRK
>NZ_CP016766.1|WP_089145063.1|954018_954918_-|transposase
MVDQIRADQAELPKAQRYKIGDLLSRINLAKATYHDERKRIANPDDKYCEVKKVIRRICEQGKVRGRLTYGYRRVQARLDQLGIHLAGATIRHLMSELGVQVEIYNHHRNGKYSSYHGRVGSVADNVLQQQFNAKDPYQVIHTDVTQVRLANQQWAYISAMTDEASKEVLAFQMSSHPNQELIMNTLNELLDHLPDDAQPIIHSDQGWHYQLKYYTKKLKDHHFIQSMSRKGNCHDNAPIESFFHLYKTELLQGLPPCNNITELRKLSLTYIDQFNNERISLKTKGMTPVGYRNHALAV
>NZ_CP016766.1|WP_094129584.1|953135_953948_+|SGNH/GDSL-hydrolase-family-protein
MNRELFIKALLHSALTATPLKVPGNSSNFSLSNTWSIPNTSLVGKSCYFLGSSITYGAAANGVSFPDYLAKQYGLTIIKEAVSATTLADKYIEISWPYHNNSEKLAIANFFTGNQAQKAGYSYLARFKKYLLKLPAPDLFVCQLSTNDSRNGVPIGKITPNSQLTNFDTTTTLGAIETLCATIKQNWNCPLTFYTCPRKDESYHQLIRYLQKLQSKWHFNLIDLANNVPFLAKLYSNPIYMADDAHPTMAGYKEVWTPFFYHELAKIIGA
>NZ_CP016766.1|WP_094129581.1|952245_953139_+|LysR-family-transcriptional-regulator
MRLTQLEYFKDVAQTLNISQTAAELHVSQPAISRSIHELESELNLTLFIRKGKKLSLSQEGLVFKQTVDNIFNQLTTGLQQLEQLKQHAQSRIIFTIANSTPLMVEIIEQLHHSLPETTILVRVNSHSLPASNPEFIDYYYQLTDHPLAGYQSVPLLTERIGILVSNSSSLAKLSALSLADLDTGLIKLSTSPFQALVDRYLTNHQVALPTVITTGDRKIICDMVSHNLGIAFIPEFSWHAYLNSQQVCFVPLKDEQLQRTIYLNYIQPKESEFHHKVVTSIQKYFTKYQTRKEHFQ
>NZ_CP016766.1|WP_094129578.1|950794_952123_-|hypothetical-protein
MFKVNGSQIEEFKIYLAKFIALKGISENGEGVVASLKFLTTFIKEQLNGEVELLPTSTNPAIYTELRGKNSETVLLYGHYDVMEADDLGWQTPPFVLTEIAGRYYGRGCGDNKGQLLAQLLGIATYLREYGELPINLKILIEGQEEQGSRDLNKLVQKYQTSLLADIDYVLVIDGSKNVNGKNVIRLGNRGLLAFELGVKVATRDLHSGNFGNVSENAALKLIGYLNKCYDFQTKRVKIPEFYADIQPATTQELEWIKKLPLPQGQTGSNVAYYHKLMFEPTFNINGMQSGYTGAKLKTIIPHKAFIRCDCRLVWGQSPELIRSQLEQLYHEELARGELEIKFLAEIAPSKTDSSSPYLMELIKTIREVTGDCLIEPIMPGTVPNYVWTDTLKVPTFTVSFANFDQNNHSVNENISRQAFWNGIEIIYHFLERKKRYYGTNI
>NZ_CP016766.1|WP_094129576.1|949626_950811_-|MFS-transporter
MEQTSKKQKVTSHAYTTLALIFIAYIICFIDRSAMNIALAYVGKDFGLSPAALGGVASAFFFSYSLMQVPGGWLVDRFGSKKMIVFSLAMWSLFTVLTGFAWSVASLLVIRVLFGIGEGGYPTASLKQIAEEFPTDAKSQATTVAISSNYVGSALAPVIIAPIIATLGWRNAFHIMGLIGLVYVLIYWLKERPLTTNVTKSASRKFNWKLVDKKIWSFFFIIFGLNTITKGLDTWMPTYLLTARHINLTGIAWLVPLPSIAAGLGAASAGFIMVRFFKGKERWLISATAALTMLFMYGMYSSRSLAAIIIFEVLAYLVKSISFATTFGYVAQIIGAKTYGSSVGVVNFGGQVAGFVAPLIIGAIVSATASYSMAFLFLVAAAGLALVSSLTVRK
>NZ_CP016766.1|WP_094129602.1|958827_959943_-|site-specific-integrase
MKNIEKNQLGKYRYYFKYKGKNYKGSWCNSLALAREQLFEVQAKVRKDGFIDNKQITFRQVHDWFMEDHKLRVKESTLNKEIGDCKNHVLPKFGDYPIASITVDYCQSVYDEWAIELGRHDIIKMYASRVFKEAIRRDIISKNPFDYVKKPKEHKKPKEREFLERDEFITFMQAAQKFDIEKYLMVRLLAYTGMRRGELFGLTWADIDFNSHTVDINKGFTLGLDNKKKIDTPKTDSSYRVLKVDTETIELLAKWKQQQALRIRTNNLRVKRDDKQFIFASQKKNEFTHPNKVYKVINDLIKVTGIKKHITPHGLRHTWTTLFVEGSGEENLMIAQKQLGHRSVRTTQDIYTHLTEDKKSKAIDIFLEGFK
>NZ_CP016766.1|WP_094129606.1|960114_960708_-|XRE-family-transcriptional-regulator
MGNRIKDLRLISGITQKELALKIGITQPALSNYESGRTPNSEITGKLADFFGVSVAYLLGLSDSPKDPFFLDPVAIALDDRKLFEQMVDTTSQWDGSDYSELVPSAVKEKIGKNLHWFSHSYEALVKHYDTPDAKIETEIEPGIERLLDLELDIIEKLSYFHYKMNNELRSGAKLDSSLEYVLEFIAGFLEREYRWK
>NZ_CP016766.1|WP_094129609.1|960878_961133_+|hypothetical-protein
MELQVITPEEIQVIIADELEKAVKDINTKGTTKQWMNKTELANYLGIGRPGLNKLIEKGMPKVMFEKTYKFYVPDVNKWLTNRK
>NZ_CP016766.1|WP_094129612.1|961408_962383_+|hypothetical-protein
MKFKELTKEKQWGVYRLKPRDNEKLGKIPVDPKTGIEGNQSKPETWLTYYEAKTYIEHYNGLSVYMGNGLWLLDIDNIRADIDDYQSGNPKADNKVVAARKLTKGSYAEVSVSGNGIHILFIYNGKEPRRRERLNNVELYSNGRHCAMTFNSLDPITDAEIKELTADELLKLIEFYGLNEPKARTPTKKPNSVILTNCQIFRDEQGHYCRRLNADEVIEEMRRYNGPAWALFSRGVETYENNDNSSADLALCNNLAYLSACDPYVMDEVFRQSALYRPKWDRLATDRATNKTYGEVTIQKAINGNEKCYYKWVKPDFGYKFGFN
>NZ_CP016766.1|WP_094129615.1|962441_964133_+|hypothetical-protein
MNNKALEIIKKGITDISSLEAVSALINENVAIPKIKPFNFAFIFSQLQKADNFRKPQLANALDTITPTYIRVYCVSKKEKESVIYTACWELLPKPALWLFDEEHHIKTYSKLEHGMEYMPDNGAWRPLMKNEKNNLLSSFLRENLDRWKLPISLRASKQELGFQNDTMSFFKNGFTFEREVDLPKEMAKRAHLVAFKNGTYNFKTGKMQEHSPANMIINAHDYNIEQGNTPETDYLLTEMIGEKNILLLKQYIGYMFYRENPLQKVLFFYGPGGEGKSTLLNYIEENIIGRDNVSHITPYDLDGNDKFAAYSMRYKELNTFAELPQDNLNSRTIASIKSLTGNDEMSIQNKGEARINERLYAKHIWSANRLPGISTKEINNALLDRFTVIKFINGNTRPGGENASFWDRHNMKKVKAERNAFVYSCLEAFRKMYFVDHTGFSISDEVKKYTSEWLNDNNTVKNFIDECCNQETLGNKKAVAAYKELYQSYRKYCIDTLGSQPLNLKNFISELNRLGDSYEYRGKCKGWYYSENAKDPTTGKRKRALIGIELQTPPNLGFLKEL
>NZ_CP016766.1|WP_094129618.1|964201_964432_+|hypothetical-protein
MYRSMILDFTNRLVFALPTKDNYKDMYDQAFSFARDHDGIVIICLDSHDLFTRRNHLIDHFDFDTKAITQFEVEAY
>NZ_CP016766.1|WP_094129621.1|964431_964761_+|head-tail-adaptor-protein
MQDIKITRLNKRAKLGGYETGVDENYSPIETFVEHATVWCAELAMTYKEVITNAGGVRKGYKTIAIRHFPNLDDEWVVILDDKTYTIETISQESGIHGFDILDLKLKKD
>NZ_CP016766.1|WP_094129624.1|965054_965405_+|HNH-endonuclease
MLMKLCNYPGCNNLIPKGDKYCREHYIKPTRKTYDNDKFYKTTAWRKLQRYHMAKQPYCVECLKQGIVRRGEIVDHIKEINDGGEKLADSNLQTLCRACHNRKTALERRRRALNRS
>NZ_CP016766.1|WP_094129627.1|965571_966021_+|phage-terminase-small-subunit-P27-family
MAKNVMAITKGHETNEQKAIRQQALNEVKNAPMVAANPPTFLDEVAKAEYKRLIALLADSVSALDENILASYCATYSAIVACQKAINADGVVMTENKINPAVKQMDALTKTLRSLANDLGLTPQARLKMAWNNAKQEDKSDPFKALVKS
>NZ_CP016766.1|WP_094129629.1|966022_967735_+|terminase-large-subunit
MNRALKYAYDAINGKKIVNKQIKQACQRFIDDLNRVDFPYYYDEAYADKVINFIEMLPTDNREQLKLIDFQVFLISQLFGWRTTNGGMRFKTFLYSCARKSGKSFIIASLALVYLFLEPGYSKQVLFTAGSLQQAHLAFDKAKNQLQNVSRVSSYMRRRFKVTSEKIFDTETDSFAVPLATNGTNNLDGYGADLAVMDECANISNKVFEDTKKVLESGMIQNENGLLCMISTAGFNMTSSFKAQCDYACDILSGKVTDDRYLALIYSLDDPEEIYDPETWVKANPILANKKIAETMQAKIQADLDTATKQGDISNVLVKNFNMWTPGRVDAYIDPKDWNKNLITPPNIYGKDAYIGIDLSTRNDLTSISWLIPLDDDDLTYYADSFSFVGTANGIERKERTDEFNYRLAAKRGECSITELESGIIDVDAVFSWLMNFITENNLNVLGIGYDPWNSNNLIARLEKQLALPLVGVRQGGLTLNVPTRQFKDLLLDGRLKHRDNKLLEYAFNNAVVKLVNNNWILNKVDRMSGKHIDPAAALINAYVLGMNYFDEQLKNKERNEYFESDEFSF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016766_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016766_3

974797-975294

Orphan

Consensus_repeat	Method
TATTTACATTCCTCTTAAGTTAAATAAATTT	CRISPRCasFinder
ATTTACATTCCTCTTAAGTTAAATAAATTT	CRT
ATTTACATTCCTCTTAAGTTAAATAAAT	PILER-CR

7 spacers

The CRISPR arrays of NZ_CP016766_3

>merge|NZ_CP016766|3|974797-975294|CRISPRCasFinder,CRT,PILER-CR
AATTTACATTCCTCTTAAGTTAAATAGATTCAGGATTTAGTAAGAAAAAGATGTTTGATGAAGTTTTATTTACATTCCTCTTAAGTTAAATAGATCTCTATATCTTGCTCCATGCACGATTGACCTGGTGCATTTACATTCCTCTTAAGTTAAATAAATTTGCTGATACTATGCCAACTCGACCAACCACGTCCATATTAATTTACATTCCTCTTAAGTTAAATAAATTTGAACCTAAAGGATTTTCACGATGCGCTAGATAGCCTAATTTACATTTCTCTTAAGTTAAATAAATTTCTTTAACTGATTGTTTAACCTTTGCCATGTGGTCCTATTTACATTCCTCTTAAGTTAAATAAATTTGCAGTTTGGTTGACCGTAGTCCCCCACTGTCTAATTTATTTACATTCCTCTTAAGTTAAATAAATTTTCGCTAGCTGACAGTTTCGCAGTGCCTAGCTTTGACGTATTTACATTCCTCTTAAGTTAAATAAATTT

>NZ_CP016766|3|3|974797-975294|CRISPRCasFinder
AATTTACATTCCTCTTAAGTTAAATAGATTC	AGGATTTAGTAAGAAAAAGATGTTTGATGAAGTTT
TATTTACATTCCTCTTAAGTTAAATAGATCT	CTATATCTTGCTCCATGCACGATTGACCTGGTG
CATTTACATTCCTCTTAAGTTAAATAAATTT	GCTGATACTATGCCAACTCGACCAACCACGTCCATATT
AATTTACATTCCTCTTAAGTTAAATAAATTT	GAACCTAAAGGATTTTCACGATGCGCTAGATAGCCT
AATTTACATTTCTCTTAAGTTAAATAAATTT	CTTTAACTGATTGTTTAACCTTTGCCATGTGGTCC
TATTTACATTCCTCTTAAGTTAAATAAATTT	GCAGTTTGGTTGACCGTAGTCCCCCACTGTCTAATT
TATTTACATTCCTCTTAAGTTAAATAAATTT	TCGCTAGCTGACAGTTTCGCAGTGCCTAGCTTTGACG
TATTTACATTCCTCTTAAGTTAAATAAATTT

>NZ_CP016766|3|2|974798-975294|CRT
ATTTACATTCCTCTTAAGTTAAATAGATTC	AGGATTTAGTAAGAAAAAGATGTTTGATGAAGTTTT
ATTTACATTCCTCTTAAGTTAAATAGATCT	CTATATCTTGCTCCATGCACGATTGACCTGGTGC
ATTTACATTCCTCTTAAGTTAAATAAATTT	GCTGATACTATGCCAACTCGACCAACCACGTCCATATTA
ATTTACATTCCTCTTAAGTTAAATAAATTT	GAACCTAAAGGATTTTCACGATGCGCTAGATAGCCTA
ATTTACATTTCTCTTAAGTTAAATAAATTT	CTTTAACTGATTGTTTAACCTTTGCCATGTGGTCCT
ATTTACATTCCTCTTAAGTTAAATAAATTT	GCAGTTTGGTTGACCGTAGTCCCCCACTGTCTAATTT
ATTTACATTCCTCTTAAGTTAAATAAATTT	TCGCTAGCTGACAGTTTCGCAGTGCCTAGCTTTGACGT
ATTTACATTCCTCTTAAGTTAAATAAATTT

>NZ_CP016766|3|3|974864-975292|PILER-CR
ATTTACATTCCTCTTAAGTTAAATAGAT	CTCTATATCTTGCTCCATGCACGATTGACCTGGTGCATT
TACATTCCTCTTAAGTTAAATAAATTTG	CTGATACTATGCCAACTCGACCAACCACGTCCATATTAATT
TACATTCCTCTTAAGTTAAATAAATTTG	AACCTAAAGGATTTTCACGATGCGCTAGATAGCCTAATT
TACATTTCTCTTAAGTTAAATAAATTTC	TTTAACTGATTGTTTAACCTTTGCCATGTGGTCCTATT
TACATTCCTCTTAAGTTAAATAAATTTG	CAGTTTGGTTGACCGTAGTCCCCCACTGTCTAATTTATT
TACATTCCTCTTAAGTTAAATAAATTTT	CGCTAGCTGACAGTTTCGCAGTGCCTAGCTTTGACGTATT
TACATTCCTCTTAAGTTAAATAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016766.1\|WP_094129651.1\|975676_975868_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376574
NZ_CP016766.1\|WP_094129648.1\|973002_973506_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129672.1\|983227_983446_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129635.1\|968942_970430_+\|phage-major-capsid-protein	unknown	unknown	gnl\|CDD\|309640
NZ_CP016766.1\|WP_094129669.1\|979671_981537_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129657.1\|976406_976679_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129654.1\|976041_976248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129660.1\|976681_976960_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185080
NZ_CP016766.1\|WP_094129624.1\|965054_965405_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_CP016766.1\|WP_094129641.1\|970786_971200_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129663.1\|977354_977555_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129644.1\|971820_972840_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP016766.1\|WP_094129638.1\|970429_970693_+\|phage-gp6-like-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|153446
NZ_CP016766.1\|WP_094129627.1\|965571_966021_+\|phage-terminase-small-subunit-P27-family	unknown	unknown	gnl\|CDD\|377461
NZ_CP016766.1\|WP_094129587.1\|982577_983114_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP016766.1\|WP_094129666.1\|979073_979322_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377551
NZ_CP016766.1\|WP_089145063.1\|981681_982581_-\|transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP016766.1\|WP_094129632.1\|967879_968938_+\|phage-portal-protein	unknown	unknown	gnl\|CDD\|273677
NZ_CP016766.1\|WP_094129621.1\|964431_964761_+\|head-tail-adaptor-protein	unknown	unknown	gnl\|CDD\|377521
NZ_CP016766.1\|WP_094129629.1\|966022_967735_+\|terminase-large-subunit	unknown	unknown	gnl\|CDD\|226974

Protein	Function_ID	Function_description	E-value
NZ_CP016766.1\|WP_094129651.1\|975676_975868_+\|hypothetical-protein	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	8.18142e-10
NZ_CP016766.1\|WP_094129635.1\|968942_970430_+\|phage-major-capsid-protein	gnl\|CDD\|309640	pfam04586, Peptidase_S78, Caudovirus prohead serine protease. Family of Caudovirus prohead serine proteases also found in a number of bacteria possibly as the result of horizontal transfer.	4.35515e-42
NZ_CP016766.1\|WP_094129587.1\|982577_983114_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.20275e-05
NZ_CP016766.1\|WP_094129660.1\|976681_976960_-\|hypothetical-protein	gnl\|CDD\|185080	PRK15126, PRK15126, HMP-PP phosphatase.	0.00190504
NZ_CP016766.1\|WP_094129624.1\|965054_965405_+\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	1.43137e-08
NZ_CP016766.1\|WP_094129666.1\|979073_979322_-\|hypothetical-protein	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.58223e-31
NZ_CP016766.1\|WP_094129629.1\|966022_967735_+\|terminase-large-subunit	gnl\|CDD\|226974	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only].	4.18117e-94
NZ_CP016766.1\|WP_094129638.1\|970429_970693_+\|phage-gp6-like-head-tail-connector-protein	gnl\|CDD\|153446	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins. The bacteriophage HK97 gp6 protein is critical in the assembly of the connector, a specialized structure that serves as an interface for head and tail attachment, as well as a point at which DNA exits the head during infection by the bacteriophage. It forms a dodecameric ring structure that comprises the middle ring of the connector, located between the portal protein (attached to the head) and the gp7 ring (attached to the tail). It is a component of the mature phage and the absence of HK97 gp6 results in defective head-tail joining and the absence of mature phage particles. Although the crystal structure of HK97 gp6 shows an unexpected 13-mer ring, the biological form present in the mature phage is believed to be a dodecamer.	1.32571e-18
NZ_CP016766.1\|WP_094129627.1\|965571_966021_+\|phage-terminase-small-subunit-P27-family	gnl\|CDD\|377461	pfam05119, Terminase_4, Phage terminase, small subunit.	1.03152e-19
NZ_CP016766.1\|WP_089145063.1\|981681_982581_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.69006e-34
NZ_CP016766.1\|WP_094129632.1\|967879_968938_+\|phage-portal-protein	gnl\|CDD\|273677	TIGR01537, portal_protein, phage portal protein, HK97 family. This model represents one of several distantly related families of phage portal protein. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. It functions as a dodecamer of a single polypeptide of average mol. wt. of 40-90 KDa. [Mobile and extrachromosomal element functions, Prophage functions].	1.14667e-31
NZ_CP016766.1\|WP_094129621.1\|964431_964761_+\|head-tail-adaptor-protein	gnl\|CDD\|377521	pfam05521, Phage_H_T_join, Phage head-tail joining protein.	3.7705e-10
NZ_CP016766.1\|WP_094129644.1\|971820_972840_-\|glycosyl-transferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.00874e-27

>NZ_CP016766.1|WP_094129648.1|973002_973506_+|hypothetical-protein
MSLYQLYAGCFFFVEEVDKTSFQYLLYLRLPYYLADRVGLDPADENLLPALNYSFDYQLNSTHDRFTQLLAHIHLNHHNFTLDLLKMPELCFITKHRCKEVKVTDEDSEYFGQVMQEALPDPEAVYLDPNEIAYKLTPEDMPLVEWTLNFEPLDTYEELINYYHNDN
>NZ_CP016766.1|WP_094129644.1|971820_972840_-|glycosyl-transferase
MKILSVIIPCYNAQDYMEHAIETLLTGGERLEILLVDDGSKDNTAQIADNYEQRYPEIVRALHQENGGHGKAVTTGLHAATGFFVKVVDSDDWVDENALREILDFLEKESLKKDAVDMLISNFIFDKQGVKHKKAMEYSSFLPTDRVFSWDEVHFPLGKYLLMHSVIYRRDVVVGQAQLELPHHTFYVDNLYVFEPLRYVKNIYYLDVNFYHYFIGRDDQSVNEQVMIGRIDQQLKVNRLMINFYAKNEAQLDPALANYMFRYLEIITTVSSILLLKDGSKESLRKKTALWNYIKRKDAHLYRELRWGLFGTGVNLPWKLGRKTALGVYKLARKMYGFN
>NZ_CP016766.1|WP_094129641.1|970786_971200_+|hypothetical-protein
MDAKKTAKNVRDYFNKQYDKDCMLAGTTLKAVRLNGMPATRNYENHNEVAFINAAEAEQRLEWLRQALDLIEDNFKNDDTDYVKLIELAYVQKLRQVDLAQSWGVTRRKLYDLLLSACIILAGAMKQVSGNRINWIA
>NZ_CP016766.1|WP_094129638.1|970429_970693_+|phage-gp6-like-head-tail-connector-protein
MVTVEDLKNSLRIDNTEDDKLIQTFINSAEGYIKSAVGKADGLESDDRYTVAVIFLAGMYYENRAETEVKIPYQIRSIIGQLQAEYQ
>NZ_CP016766.1|WP_094129635.1|968942_970430_+|phage-major-capsid-protein
MLEKRFLINAELRANNPQKGAEDSPDAKETAEKTVQGYAVLYEQESELLTGKDGLKFTEVIHKGALDNVDFSNLVMIYNHDYKDVLASVKAGTLTVELDDKGLKFKATLPGTSVSDDVYKNIQAGNLDSMSFGFTVSDDGSAWTQTDDGNYKREVNSIANLYELSVVTLPAYPDTNVNVDTRSLITNTKENKDMFKSVNTNDEVTPVQAMEAYIRAAGNLDAETRSALTTESGKVVMPKEVITPAYELKDDGLNLAEFATVENVSMGSGSLPIVPADDTTTLVTKTEAEELSDTDLALKEVEYKVETRAGRIVISDEAKDDSAVDIIALCKKQLKRLVRNTDNQNILKLLATLPGKTAANLDDLKTIFNVNLNSNLKKTSMWIVNATAFNTLDQLKDNEGRYLLQPDVTAPSGFSLLGQPVFMVSDRAWKAAITGKANMILADMSQAVAVFRRNQVSYNWEKFDSYAQGLAIATRDDYKLIDTEAGFAITFGAAA
>NZ_CP016766.1|WP_094129632.1|967879_968938_+|phage-portal-protein
MSFFINNQATTGSADPVEQVLIGFNDNANFNISNNVLSSSSLFTVIQIIANDVASCKLNCDTPNIGNNFSKRRLLFPVVSNMLLYGNSFVENLGSGNFRLVPNDHIEIEYDDVTNQVRYKYNNHEQKARYIPNEKLLHFFEFTKNGVFGLSRVQALKGTLKAEKELNNLLGGYLTSGIHGTTVIKSVNSDLSREAREKVRKAFDEATTGDKALNSIVVGPDLDVSSLELNTDVLNVIDKVNEVVIRRIASTFGLPIEKLGLENVHSNALQSDKTSSSYLRGTLQHIFDCITSELTEKLGNKNFSFDTSALTSVDPKEMLEQAANAYNNGLITLDEARQMINLDPVGNTYFKE
>NZ_CP016766.1|WP_094129629.1|966022_967735_+|terminase-large-subunit
MNRALKYAYDAINGKKIVNKQIKQACQRFIDDLNRVDFPYYYDEAYADKVINFIEMLPTDNREQLKLIDFQVFLISQLFGWRTTNGGMRFKTFLYSCARKSGKSFIIASLALVYLFLEPGYSKQVLFTAGSLQQAHLAFDKAKNQLQNVSRVSSYMRRRFKVTSEKIFDTETDSFAVPLATNGTNNLDGYGADLAVMDECANISNKVFEDTKKVLESGMIQNENGLLCMISTAGFNMTSSFKAQCDYACDILSGKVTDDRYLALIYSLDDPEEIYDPETWVKANPILANKKIAETMQAKIQADLDTATKQGDISNVLVKNFNMWTPGRVDAYIDPKDWNKNLITPPNIYGKDAYIGIDLSTRNDLTSISWLIPLDDDDLTYYADSFSFVGTANGIERKERTDEFNYRLAAKRGECSITELESGIIDVDAVFSWLMNFITENNLNVLGIGYDPWNSNNLIARLEKQLALPLVGVRQGGLTLNVPTRQFKDLLLDGRLKHRDNKLLEYAFNNAVVKLVNNNWILNKVDRMSGKHIDPAAALINAYVLGMNYFDEQLKNKERNEYFESDEFSF
>NZ_CP016766.1|WP_094129627.1|965571_966021_+|phage-terminase-small-subunit-P27-family
MAKNVMAITKGHETNEQKAIRQQALNEVKNAPMVAANPPTFLDEVAKAEYKRLIALLADSVSALDENILASYCATYSAIVACQKAINADGVVMTENKINPAVKQMDALTKTLRSLANDLGLTPQARLKMAWNNAKQEDKSDPFKALVKS
>NZ_CP016766.1|WP_094129624.1|965054_965405_+|HNH-endonuclease
MLMKLCNYPGCNNLIPKGDKYCREHYIKPTRKTYDNDKFYKTTAWRKLQRYHMAKQPYCVECLKQGIVRRGEIVDHIKEINDGGEKLADSNLQTLCRACHNRKTALERRRRALNRS
>NZ_CP016766.1|WP_094129621.1|964431_964761_+|head-tail-adaptor-protein
MQDIKITRLNKRAKLGGYETGVDENYSPIETFVEHATVWCAELAMTYKEVITNAGGVRKGYKTIAIRHFPNLDDEWVVILDDKTYTIETISQESGIHGFDILDLKLKKD
>NZ_CP016766.1|WP_094129651.1|975676_975868_+|hypothetical-protein
MNAANPKFAKYSNGPIEGINSKIKLLRRLSFGMPNFTNMKKRIILWLNFKPKKKNSKKIALIS
>NZ_CP016766.1|WP_094129654.1|976041_976248_-|hypothetical-protein
MDMAMEVSFDYKGINYFIEPDAKSDKWMIFCSLKPDVPLFMTMNEVLDMKIDDMPLKEVLPLVTNAIY
>NZ_CP016766.1|WP_094129657.1|976406_976679_-|hypothetical-protein
MGKLRFFENDVYFLRNKYPKLYKILWTNTNPKFNYEDKYNMNVTYRDYNDELELRKIEKEFVLEIADSLTPDNSDLNGDGLKLEEIWDYA
>NZ_CP016766.1|WP_094129660.1|976681_976960_-|hypothetical-protein
MDSEVVGLVTGNGTRVYSHSARMLGRMFGVKKESNGKKGIGVSIDDLKDIPINEEAEYSNKRNSTNYISNSGYLVLSDMGKIITVVPRKKER
>NZ_CP016766.1|WP_094129663.1|977354_977555_-|hypothetical-protein
MKLYKWKKGDGKQLLGCLVAVLVGGIIALPLLILGVTSIDDIIIPVFFIVGFITFIGGIFKWIFRL
>NZ_CP016766.1|WP_094129666.1|979073_979322_-|hypothetical-protein
MLVNYHVPKHVYIVCGNTDLRKGIDTLAILIADNFGLDLYDDSLFLFCGRRNDRFKALYWDGEEFILLYKRFDNGRLTWLLT
>NZ_CP016766.1|WP_094129669.1|979671_981537_-|hypothetical-protein
MGKKFKGFLNKEYVGSIEEVNKHSDQFYKDFSLYIYDKVQVRKEYTKLSRFIDLLKISDVYITDMGDILNLKYDSLLDWILILNVDEEINNKINRMRNELKLLQNIKSEYLYDSSSKLHDFIQKCNYLFNNEYLKQNISNIENIISITSYYYKQIDDVEINLLNKQNENPNLKFYDFYFFEIVQMWKFSDAKISKNNDGKIYVNNINDISNAFVVTRNLNKDNRNLARNLSLSKKMGSHRIDDYLIGLGEELFLGLDESDKKVYLRLDLLKNTMLYDITILRWVECLRSLRKSVIYKYEKYRKCFFNINELNIEDVETIQIAKILSFHNDFLDTPFLVLDKEIFVYAPALIIGDIVHYLNIAIKYSRDKSIQNMRGNNFENTIGRLLDYHGNDFCKAEEDVYGNTIKLIYTENSRQHEFDLIASDDDERVVQIECKTFMDPFSYRDYRIGIDKMFSGKKNNGYLETDFMHFESLKNNGHNVIINNIKNHSDISKNKGVSTYFNKPRNWDDMYMMFISNYIFPSRMVKNWSNKYGINFVHWFEFNRLIKNIPLDKDWFIVNGVRVLNSEIETNITDKFNRNNIKEISDGQYISELVNHRSQKCKLKFNEKEWIPGVFVKCYE
>NZ_CP016766.1|WP_089145063.1|981681_982581_-|transposase
MVDQIRADQAELPKAQRYKIGDLLSRINLAKATYHDERKRIANPDDKYCEVKKVIRRICEQGKVRGRLTYGYRRVQARLDQLGIHLAGATIRHLMSELGVQVEIYNHHRNGKYSSYHGRVGSVADNVLQQQFNAKDPYQVIHTDVTQVRLANQQWAYISAMTDEASKEVLAFQMSSHPNQELIMNTLNELLDHLPDDAQPIIHSDQGWHYQLKYYTKKLKDHHFIQSMSRKGNCHDNAPIESFFHLYKTELLQGLPPCNNITELRKLSLTYIDQFNNERISLKTKGMTPVGYRNHALAV
>NZ_CP016766.1|WP_094129587.1|982577_983114_-|transposase
MTKYSPEFKAQVVVEYMTDGLSSYTLEKKYKVSARQIRKWIQQYQLQGIKSFKQHHRKRIFSAKFKWHVINYYQTHAESFAQVAAKFDLLPSQISIWRQAFIKYGYDALKPHRKGRSQKVKKQTKKQKQKLVEKKEIDQLREELARTKQELYNTKMDRDILKKSLALFGPSKPGKKRK
>NZ_CP016766.1|WP_094129672.1|983227_983446_-|hypothetical-protein
MLKQVLVSPKEYGNDKAVAASEYNAVITLMSGKQIRVSGNAYTYKDALVNLYENNQSTFEEASVKSLLLELS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP016766_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016766_4

977812-978836

Orphan

Consensus_repeat	Method
ATTTACATTCCTCTTAAGTTAAATAGAATC	PILER-CR
ATTTACATTCCTCTTAAGTTAAATAGAATC	CRISPRCasFinder
ATTTACATTCCTCTTAAGTTAAATAGAATC	CRT

15 spacers

The CRISPR arrays of NZ_CP016766_4

>merge|NZ_CP016766|4|977812-978836|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTCCTCTTAAGTTAAATAGAATCGAAAGTTGCTAAGTTCGGTGTTTCCGACTTTGAATAATTTACATTCCTCTTAAGTTAAATAGAATCAAGGCTTTACAACCGGGGACGGTGCAAGCCAAAATCCATTTACATTCCTCTTAAGTTAAATAGAATCAACGCAACTAGAGTATAGCCGACTTAATGCTAATGAATTTACATTCCTCTTAAGTTAAATAGAATCGATTCTGCTTGTGATTCTGATTCTGCTTGTTCTTTATTTACATTCCTCTTAAGTTAAATAGAATCCCTATCAGCTACGACCGTAAGCTTTTGATTCCTGCATTTACATTCCTCTTAAGTTAAATAGAATCTAGTAGATAGGATAAAAAACGAAGTAATTAGTTGTATTTACATTCCTCTTAAGTTAAATAGAATCTTGTGGTGAAGTGGGATTCCCATACCCGAATACTATTTACATTCCTCTTAAGTTAAATAGAATCGAATATGAAGCTTGACCTAAATTATCGGCATTCCAATTTACATTCCTCTTAAGTTAAATAGAATCAGTCCATAGACTACTATTTTTACTAAGCTCTATTTATTTACATTCCTCTTAAGTTAAATAGAATCGCCACCTGGTTGGCCAGATCTGACCGGATTCAGACATATTTACATTCCTCTTAAGTTAAATAGAATCGAAGGCTAAGAACGTAGTTAACGAGCTTGTAAACCTGAATTTACATTCCTCTTAAGTTAAATAGAATCTGCTCAAGCATAAGCTTAAAGTCCGCCCATTGAACCAATTTACATTCCTCTTAAGTTAAATAGAATCCTTCAACTCCGGCCGTTTCCAAATGGCCTTTATCATCAACATTTACATTCCTCTTAAGTTAAATAGAATCCGAAGAGCCGGCAAGTCCGGTTGTTAAACATGAAATTGATTTACATTCCTCTTAAGTTAAATAGAATCAAAGCCCCCTAGGTCAAAGGGCTTTATCACTGTTTAAATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|4|4|977812-978836|PILER-CR
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAAAGTTGCTAAGTTCGGTGTTTCCGACTTTGAATA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AAGGCTTTACAACCGGGGACGGTGCAAGCCAAAATCC
ATTTACATTCCTCTTAAGTTAAATAGAATC	AACGCAACTAGAGTATAGCCGACTTAATGCTAATGA
ATTTACATTCCTCTTAAGTTAAATAGAATC	GATTCTGCTTGTGATTCTGATTCTGCTTGTTCTTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	CCTATCAGCTACGACCGTAAGCTTTTGATTCCTGC
ATTTACATTCCTCTTAAGTTAAATAGAATC	TAGTAGATAGGATAAAAAACGAAGTAATTAGTTGT
ATTTACATTCCTCTTAAGTTAAATAGAATC	TTGTGGTGAAGTGGGATTCCCATACCCGAATACT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAATATGAAGCTTGACCTAAATTATCGGCATTCCA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGTCCATAGACTACTATTTTTACTAAGCTCTATTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GCCACCTGGTTGGCCAGATCTGACCGGATTCAGACAT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAAGGCTAAGAACGTAGTTAACGAGCTTGTAAACCTGA
ATTTACATTCCTCTTAAGTTAAATAGAATC	TGCTCAAGCATAAGCTTAAAGTCCGCCCATTGAACCA
ATTTACATTCCTCTTAAGTTAAATAGAATC	CTTCAACTCCGGCCGTTTCCAAATGGCCTTTATCATCAAC
ATTTACATTCCTCTTAAGTTAAATAGAATC	CGAAGAGCCGGCAAGTCCGGTTGTTAAACATGAAATTG
ATTTACATTCCTCTTAAGTTAAATAGAATC	AAAGCCCCCTAGGTCAAAGGGCTTTATCACTGTTTAA
ATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|4|4|977812-978836|CRISPRCasFinder
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAAAGTTGCTAAGTTCGGTGTTTCCGACTTTGAATA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AAGGCTTTACAACCGGGGACGGTGCAAGCCAAAATCC
ATTTACATTCCTCTTAAGTTAAATAGAATC	AACGCAACTAGAGTATAGCCGACTTAATGCTAATGA
ATTTACATTCCTCTTAAGTTAAATAGAATC	GATTCTGCTTGTGATTCTGATTCTGCTTGTTCTTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	CCTATCAGCTACGACCGTAAGCTTTTGATTCCTGC
ATTTACATTCCTCTTAAGTTAAATAGAATC	TAGTAGATAGGATAAAAAACGAAGTAATTAGTTGT
ATTTACATTCCTCTTAAGTTAAATAGAATC	TTGTGGTGAAGTGGGATTCCCATACCCGAATACT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAATATGAAGCTTGACCTAAATTATCGGCATTCCA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGTCCATAGACTACTATTTTTACTAAGCTCTATTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GCCACCTGGTTGGCCAGATCTGACCGGATTCAGACAT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAAGGCTAAGAACGTAGTTAACGAGCTTGTAAACCTGA
ATTTACATTCCTCTTAAGTTAAATAGAATC	TGCTCAAGCATAAGCTTAAAGTCCGCCCATTGAACCA
ATTTACATTCCTCTTAAGTTAAATAGAATC	CTTCAACTCCGGCCGTTTCCAAATGGCCTTTATCATCAAC
ATTTACATTCCTCTTAAGTTAAATAGAATC	CGAAGAGCCGGCAAGTCCGGTTGTTAAACATGAAATTG
ATTTACATTCCTCTTAAGTTAAATAGAATC	AAAGCCCCCTAGGTCAAAGGGCTTTATCACTGTTTAA
ATTTACATTCCTCTTAAGTTAAATAGAATC

>NZ_CP016766|4|3|977812-978836|CRT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAAAGTTGCTAAGTTCGGTGTTTCCGACTTTGAATA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AAGGCTTTACAACCGGGGACGGTGCAAGCCAAAATCC
ATTTACATTCCTCTTAAGTTAAATAGAATC	AACGCAACTAGAGTATAGCCGACTTAATGCTAATGA
ATTTACATTCCTCTTAAGTTAAATAGAATC	GATTCTGCTTGTGATTCTGATTCTGCTTGTTCTTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	CCTATCAGCTACGACCGTAAGCTTTTGATTCCTGC
ATTTACATTCCTCTTAAGTTAAATAGAATC	TAGTAGATAGGATAAAAAACGAAGTAATTAGTTGT
ATTTACATTCCTCTTAAGTTAAATAGAATC	TTGTGGTGAAGTGGGATTCCCATACCCGAATACT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAATATGAAGCTTGACCTAAATTATCGGCATTCCA
ATTTACATTCCTCTTAAGTTAAATAGAATC	AGTCCATAGACTACTATTTTTACTAAGCTCTATTT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GCCACCTGGTTGGCCAGATCTGACCGGATTCAGACAT
ATTTACATTCCTCTTAAGTTAAATAGAATC	GAAGGCTAAGAACGTAGTTAACGAGCTTGTAAACCTGA
ATTTACATTCCTCTTAAGTTAAATAGAATC	TGCTCAAGCATAAGCTTAAAGTCCGCCCATTGAACCA
ATTTACATTCCTCTTAAGTTAAATAGAATC	CTTCAACTCCGGCCGTTTCCAAATGGCCTTTATCATCAAC
ATTTACATTCCTCTTAAGTTAAATAGAATC	CGAAGAGCCGGCAAGTCCGGTTGTTAAACATGAAATTG
ATTTACATTCCTCTTAAGTTAAATAGAATC	AAAGCCCCCTAGGTCAAAGGGCTTTATCACTGTTTAA
ATTTACATTCCTCTTAAGTTAAATAGAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016766.1\|WP_094129680.1\|986521_987868_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_CP016766.1\|WP_094129651.1\|975676_975868_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376574
NZ_CP016766.1\|WP_094129648.1\|973002_973506_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129674.1\|984696_985380_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP016766.1\|WP_094129672.1\|983227_983446_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129635.1\|968942_970430_+\|phage-major-capsid-protein	unknown	unknown	gnl\|CDD\|309640
NZ_CP016766.1\|WP_003709292.1\|983757_984681_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP016766.1\|WP_094129657.1\|976406_976679_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129587.1\|982577_983114_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP016766.1\|WP_094129660.1\|976681_976960_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185080
NZ_CP016766.1\|WP_094129677.1\|985386_986502_-\|UDP-galactopyranose-mutase	unknown	unknown	gnl\|CDD\|223636
NZ_CP016766.1\|WP_094129666.1\|979073_979322_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377551
NZ_CP016766.1\|WP_094129683.1\|987887_989402_-\|carnitine-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP016766.1\|WP_094129663.1\|977354_977555_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129644.1\|971820_972840_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP016766.1\|WP_094129638.1\|970429_970693_+\|phage-gp6-like-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|153446
NZ_CP016766.1\|WP_094129654.1\|976041_976248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_089145063.1\|981681_982581_-\|transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP016766.1\|WP_094129669.1\|979671_981537_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016766.1\|WP_094129641.1\|970786_971200_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016766.1\|WP_094129680.1\|986521_987868_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP016766.1\|WP_094129651.1\|975676_975868_+\|hypothetical-protein	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	8.18142e-10
NZ_CP016766.1\|WP_094129635.1\|968942_970430_+\|phage-major-capsid-protein	gnl\|CDD\|309640	pfam04586, Peptidase_S78, Caudovirus prohead serine protease. Family of Caudovirus prohead serine proteases also found in a number of bacteria possibly as the result of horizontal transfer.	4.35515e-42
NZ_CP016766.1\|WP_003709292.1\|983757_984681_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	5.31368e-74
NZ_CP016766.1\|WP_094129587.1\|982577_983114_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.20275e-05
NZ_CP016766.1\|WP_094129660.1\|976681_976960_-\|hypothetical-protein	gnl\|CDD\|185080	PRK15126, PRK15126, HMP-PP phosphatase.	0.00190504
NZ_CP016766.1\|WP_094129677.1\|985386_986502_-\|UDP-galactopyranose-mutase	gnl\|CDD\|223636	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane].	0
NZ_CP016766.1\|WP_094129666.1\|979073_979322_-\|hypothetical-protein	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.58223e-31
NZ_CP016766.1\|WP_094129683.1\|987887_989402_-\|carnitine-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	1.6282e-108
NZ_CP016766.1\|WP_094129644.1\|971820_972840_-\|glycosyl-transferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.00874e-27
NZ_CP016766.1\|WP_094129638.1\|970429_970693_+\|phage-gp6-like-head-tail-connector-protein	gnl\|CDD\|153446	cd08054, gp6, Head-Tail Connector Protein gp6 of Bacteriophage HK97 and similar proteins. The bacteriophage HK97 gp6 protein is critical in the assembly of the connector, a specialized structure that serves as an interface for head and tail attachment, as well as a point at which DNA exits the head during infection by the bacteriophage. It forms a dodecameric ring structure that comprises the middle ring of the connector, located between the portal protein (attached to the head) and the gp7 ring (attached to the tail). It is a component of the mature phage and the absence of HK97 gp6 results in defective head-tail joining and the absence of mature phage particles. Although the crystal structure of HK97 gp6 shows an unexpected 13-mer ring, the biological form present in the mature phage is believed to be a dodecamer.	1.32571e-18
NZ_CP016766.1\|WP_094129674.1\|984696_985380_-\|hypothetical-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.2502e-14
NZ_CP016766.1\|WP_089145063.1\|981681_982581_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.69006e-34

>NZ_CP016766.1|WP_094129663.1|977354_977555_-|hypothetical-protein
MKLYKWKKGDGKQLLGCLVAVLVGGIIALPLLILGVTSIDDIIIPVFFIVGFITFIGGIFKWIFRL
>NZ_CP016766.1|WP_094129660.1|976681_976960_-|hypothetical-protein
MDSEVVGLVTGNGTRVYSHSARMLGRMFGVKKESNGKKGIGVSIDDLKDIPINEEAEYSNKRNSTNYISNSGYLVLSDMGKIITVVPRKKER
>NZ_CP016766.1|WP_094129657.1|976406_976679_-|hypothetical-protein
MGKLRFFENDVYFLRNKYPKLYKILWTNTNPKFNYEDKYNMNVTYRDYNDELELRKIEKEFVLEIADSLTPDNSDLNGDGLKLEEIWDYA
>NZ_CP016766.1|WP_094129654.1|976041_976248_-|hypothetical-protein
MDMAMEVSFDYKGINYFIEPDAKSDKWMIFCSLKPDVPLFMTMNEVLDMKIDDMPLKEVLPLVTNAIY
>NZ_CP016766.1|WP_094129651.1|975676_975868_+|hypothetical-protein
MNAANPKFAKYSNGPIEGINSKIKLLRRLSFGMPNFTNMKKRIILWLNFKPKKKNSKKIALIS
>NZ_CP016766.1|WP_094129648.1|973002_973506_+|hypothetical-protein
MSLYQLYAGCFFFVEEVDKTSFQYLLYLRLPYYLADRVGLDPADENLLPALNYSFDYQLNSTHDRFTQLLAHIHLNHHNFTLDLLKMPELCFITKHRCKEVKVTDEDSEYFGQVMQEALPDPEAVYLDPNEIAYKLTPEDMPLVEWTLNFEPLDTYEELINYYHNDN
>NZ_CP016766.1|WP_094129644.1|971820_972840_-|glycosyl-transferase
MKILSVIIPCYNAQDYMEHAIETLLTGGERLEILLVDDGSKDNTAQIADNYEQRYPEIVRALHQENGGHGKAVTTGLHAATGFFVKVVDSDDWVDENALREILDFLEKESLKKDAVDMLISNFIFDKQGVKHKKAMEYSSFLPTDRVFSWDEVHFPLGKYLLMHSVIYRRDVVVGQAQLELPHHTFYVDNLYVFEPLRYVKNIYYLDVNFYHYFIGRDDQSVNEQVMIGRIDQQLKVNRLMINFYAKNEAQLDPALANYMFRYLEIITTVSSILLLKDGSKESLRKKTALWNYIKRKDAHLYRELRWGLFGTGVNLPWKLGRKTALGVYKLARKMYGFN
>NZ_CP016766.1|WP_094129641.1|970786_971200_+|hypothetical-protein
MDAKKTAKNVRDYFNKQYDKDCMLAGTTLKAVRLNGMPATRNYENHNEVAFINAAEAEQRLEWLRQALDLIEDNFKNDDTDYVKLIELAYVQKLRQVDLAQSWGVTRRKLYDLLLSACIILAGAMKQVSGNRINWIA
>NZ_CP016766.1|WP_094129638.1|970429_970693_+|phage-gp6-like-head-tail-connector-protein
MVTVEDLKNSLRIDNTEDDKLIQTFINSAEGYIKSAVGKADGLESDDRYTVAVIFLAGMYYENRAETEVKIPYQIRSIIGQLQAEYQ
>NZ_CP016766.1|WP_094129635.1|968942_970430_+|phage-major-capsid-protein
MLEKRFLINAELRANNPQKGAEDSPDAKETAEKTVQGYAVLYEQESELLTGKDGLKFTEVIHKGALDNVDFSNLVMIYNHDYKDVLASVKAGTLTVELDDKGLKFKATLPGTSVSDDVYKNIQAGNLDSMSFGFTVSDDGSAWTQTDDGNYKREVNSIANLYELSVVTLPAYPDTNVNVDTRSLITNTKENKDMFKSVNTNDEVTPVQAMEAYIRAAGNLDAETRSALTTESGKVVMPKEVITPAYELKDDGLNLAEFATVENVSMGSGSLPIVPADDTTTLVTKTEAEELSDTDLALKEVEYKVETRAGRIVISDEAKDDSAVDIIALCKKQLKRLVRNTDNQNILKLLATLPGKTAANLDDLKTIFNVNLNSNLKKTSMWIVNATAFNTLDQLKDNEGRYLLQPDVTAPSGFSLLGQPVFMVSDRAWKAAITGKANMILADMSQAVAVFRRNQVSYNWEKFDSYAQGLAIATRDDYKLIDTEAGFAITFGAAA
>NZ_CP016766.1|WP_094129666.1|979073_979322_-|hypothetical-protein
MLVNYHVPKHVYIVCGNTDLRKGIDTLAILIADNFGLDLYDDSLFLFCGRRNDRFKALYWDGEEFILLYKRFDNGRLTWLLT
>NZ_CP016766.1|WP_094129669.1|979671_981537_-|hypothetical-protein
MGKKFKGFLNKEYVGSIEEVNKHSDQFYKDFSLYIYDKVQVRKEYTKLSRFIDLLKISDVYITDMGDILNLKYDSLLDWILILNVDEEINNKINRMRNELKLLQNIKSEYLYDSSSKLHDFIQKCNYLFNNEYLKQNISNIENIISITSYYYKQIDDVEINLLNKQNENPNLKFYDFYFFEIVQMWKFSDAKISKNNDGKIYVNNINDISNAFVVTRNLNKDNRNLARNLSLSKKMGSHRIDDYLIGLGEELFLGLDESDKKVYLRLDLLKNTMLYDITILRWVECLRSLRKSVIYKYEKYRKCFFNINELNIEDVETIQIAKILSFHNDFLDTPFLVLDKEIFVYAPALIIGDIVHYLNIAIKYSRDKSIQNMRGNNFENTIGRLLDYHGNDFCKAEEDVYGNTIKLIYTENSRQHEFDLIASDDDERVVQIECKTFMDPFSYRDYRIGIDKMFSGKKNNGYLETDFMHFESLKNNGHNVIINNIKNHSDISKNKGVSTYFNKPRNWDDMYMMFISNYIFPSRMVKNWSNKYGINFVHWFEFNRLIKNIPLDKDWFIVNGVRVLNSEIETNITDKFNRNNIKEISDGQYISELVNHRSQKCKLKFNEKEWIPGVFVKCYE
>NZ_CP016766.1|WP_089145063.1|981681_982581_-|transposase
MVDQIRADQAELPKAQRYKIGDLLSRINLAKATYHDERKRIANPDDKYCEVKKVIRRICEQGKVRGRLTYGYRRVQARLDQLGIHLAGATIRHLMSELGVQVEIYNHHRNGKYSSYHGRVGSVADNVLQQQFNAKDPYQVIHTDVTQVRLANQQWAYISAMTDEASKEVLAFQMSSHPNQELIMNTLNELLDHLPDDAQPIIHSDQGWHYQLKYYTKKLKDHHFIQSMSRKGNCHDNAPIESFFHLYKTELLQGLPPCNNITELRKLSLTYIDQFNNERISLKTKGMTPVGYRNHALAV
>NZ_CP016766.1|WP_094129587.1|982577_983114_-|transposase
MTKYSPEFKAQVVVEYMTDGLSSYTLEKKYKVSARQIRKWIQQYQLQGIKSFKQHHRKRIFSAKFKWHVINYYQTHAESFAQVAAKFDLLPSQISIWRQAFIKYGYDALKPHRKGRSQKVKKQTKKQKQKLVEKKEIDQLREELARTKQELYNTKMDRDILKKSLALFGPSKPGKKRK
>NZ_CP016766.1|WP_094129672.1|983227_983446_-|hypothetical-protein
MLKQVLVSPKEYGNDKAVAASEYNAVITLMSGKQIRVSGNAYTYKDALVNLYENNQSTFEEASVKSLLLELS
>NZ_CP016766.1|WP_003709292.1|983757_984681_+|IS30-family-transposase
MGTTILSFSDRIVIETLRHEKRSLRYIADYLGFSKTTIFNEIHRLKGEYHATSAQADHETKLSYRGRKCSLTANLKRLIEDKIKIQKWSIEQVAHVVRIAYKTIYNWVDQGLLDIRMTDLPDHGIRRKRAKETRGTFSHGRSIEDRPAEASDRNIAGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLGGRDSTSMTKAILELANQLGTNLKTLTVDHGKEFANYQSIEKNTGVPLYFAHAYSPHERGSNENRNRVLRRFIPKGQPIEEISDDELIQINWYLNSRPLKCLNWRTPIEIFLLNLRH
>NZ_CP016766.1|WP_094129674.1|984696_985380_-|hypothetical-protein
MKLIRNYLYNAGYQMLALIIPFITAPYISRTLKPHGVGIYADTNAWIQWFVLLASVGIALYGNREIAYVRDDKEKLSRTFWEIQVVKMIMTVISYIVLCFFLNVYTQYKNYMWIQSLNILAVAFDISWFYMGIEDFKRTVIRNTLVKLMSLALILLFVKSPNDIGVYIFLTTLSVTLGNFTLWPRLRILLVRVGLNTLRPLKHLKTSLALFVPQIATQVYLILGRLQ
>NZ_CP016766.1|WP_094129677.1|985386_986502_-|UDP-galactopyranose-mutase
MTKYLVVGAGLFGATFAYEAAKRGHEVKVIEKRDHIAGNIYTKEVNGIQVHQYGAHIFHTSNKKIWDYVNQFAEFNRYTNSPVANYNGEIYNLPFNMNTFNKLWGVATPAEAQAKIEEQRSILGDKRPENLEEQAISLIGTDIYEKLIKGYTEKQWGHKAIDLPAFIIRRLPVRFTYDNNYFNDDFQGIPMGGYTQIVEKMLAHENISVELNTDFFANKEAYLKDYDKVVFTGMIDQFFDYKLGELEYRSLRFETEVLDEDNYQGNAVVNYTDAETPFTRIIEHKHFEFGKGEKGKTVITREYPANWQRGDEPYYPVNNKENNTLYKDYKELADREAKNVIFGGRLGQYRYYNMDQVIMAALVTVEKEFEG
>NZ_CP016766.1|WP_094129680.1|986521_987868_-|phosphoglucosamine-mutase
MKYFGTDGVRGIANESLSPELAFKLGRCGGYILTKHANGHTPRVLLARDTRISGQMLAQALTAGLLSVGIEVYDLGVMTTPGVAYLVRTEGMDAGAMISASHNPAQDNGIKFFGNDGYKLSDEKELEIEELLDAPEDTLPRPSSEGLGTVSTYSEAAMKYLRFLQNTIPDDLAGMKVAIDGANGATSALVLQLYANVGAEFVTMATQPDGININDGVGSTHPEALAKFVVDQEAQVGVAYDGDGDRFIAVDELGNIIDGDKIMYICGKYLASQGKLNQNTIVTTVMSNIGLYKAMAAHGLNSVKTKVGDRYVVEEMRKSSYNLGGEQSGHIVFLDHNTTGDGMLTSLQLLNVMKQTGKKLSELAAEVTTYPQELVNVKVTDKQEALSNAKIKAKIAEVEETMAGEGRVLVRPSGTEDLLRVMAEAPTKKLVHQYVMEIVNVVEAEMGI
>NZ_CP016766.1|WP_094129683.1|987887_989402_-|carnitine-transporter
MKNKLVKQIDWLQTLLPLISIALLVIVFLLYPQKSTQVLHAIRSELGNKFGWLYILLGISMFTTTLVVAFSKYGHIVLGNKQAPIYGNVKWGMMIFTSTMSADIIFYALTEWTMYAREQFIQEKVGGVGLWTLTYSLFHWGPIAWSFYIILAVAFAFMIHVRKKDKQKFSEAVRPLLGNKVDGVWGKLINLIAIFALIAGTATTFSVSMPLLSAALSKVFGFHDSSFLAVIILLIIATIYTVNVLLGMDAISRLASYCVVLFLLLLGFVFLCGGKELFILNNGIEAIGNLVQNFIGMATWTDSLKTSHFVENWTIYYWAYWLVWCTATPFFIATISKGRTIKNMILGAYSWGLSGTALAFIVLSNYGLGKYLLDGLAVEQLINKGNSYIEIAIKVLDTLPAHNIVLMLLILTMMGMYATVFESITMVVSFYSYKELSEGQLPDRRIRAFWAITFIILPLALIFMKQSIYSLQSVAIIFAFPISIIVLLVVVSFFKDAKKYLNNN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP016766_2	2.1\|957604\|38\|NZ_CP016766\|PILER-CR,CRISPRCasFinder,CRT	957604-957641	38	NZ_CP016766.1	971551-971588	0	1.0

1. spacer 2.1|957604|38|NZ_CP016766|PILER-CR,CRISPRCasFinder,CRT matches to position: 971551-971588, mismatch: 0, identity: 1.0

cgtttagaacgtcccaaaacattataaaaccctatcta	CRISPR spacer
cgtttagaacgtcccaaaacattataaaaccctatcta	Protospacer
**************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016766_4	4.5\|978106\|35\|NZ_CP016766\|PILER-CR,CRISPRCasFinder,CRT	978106-978140	35	MK448909	Streptococcus phage Javan330, complete genome	25040-25074	7	0.8
NZ_CP016766_1	1.2\|858368\|32\|NZ_CP016766\|PILER-CR	858368-858399	32	NC_020305	Desulfocapsa sulfexigens DSM 10523 plasmid unnamed, complete sequence	8042-8073	8	0.75
NZ_CP016766_3	3.1\|974828\|35\|NZ_CP016766\|CRISPRCasFinder	974828-974862	35	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	154832-154866	10	0.714
NZ_CP016766_4	4.9\|978365\|35\|NZ_CP016766\|PILER-CR,CRISPRCasFinder,CRT	978365-978399	35	KU847400	UNVERIFIED: Bacillus phage Crookii, complete genome	26868-26902	10	0.714
NZ_CP016766_4	4.4\|978041\|35\|NZ_CP016766\|PILER-CR,CRISPRCasFinder,CRT	978041-978075	35	NZ_AP014817	Geminocystis sp. NIES-3708 plasmid pGM02, complete sequence	28827-28861	11	0.686

1. spacer 4.5|978106|35|NZ_CP016766|PILER-CR,CRISPRCasFinder,CRT matches to MK448909 (Streptococcus phage Javan330, complete genome) position: , mismatch: 7, identity: 0.8

cctatcagctacgaccgtaagcttttgattcctgc	CRISPR spacer
ccgattgaatacgaccgcaagctcttgattcctgc	Protospacer
** **... ********.*****.***********

2. spacer 1.2|858368|32|NZ_CP016766|PILER-CR matches to NC_020305 (Desulfocapsa sulfexigens DSM 10523 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ccgttcgctggtttggctgttgattcccttca	CRISPR spacer
atattcgctgctttggctgttgattccaattc	Protospacer
 ..******* ****************  *.

3. spacer 3.1|974828|35|NZ_CP016766|CRISPRCasFinder matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 10, identity: 0.714

aggatttagtaagaaaaagatgtttgatgaagttt	CRISPR spacer
ccgtattaggaacaaaaagatgtttgatgagatca	Protospacer
  *  **** ** *****************..*.

4. spacer 4.9|978365|35|NZ_CP016766|PILER-CR,CRISPRCasFinder,CRT matches to KU847400 (UNVERIFIED: Bacillus phage Crookii, complete genome) position: , mismatch: 10, identity: 0.714

agtccatagactactatttttactaagctctattt	CRISPR spacer
gcttattttactgctatttttactaagctctttta	Protospacer
. *.  *  ***.****************** **

5. spacer 4.4|978041|35|NZ_CP016766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014817 (Geminocystis sp. NIES-3708 plasmid pGM02, complete sequence) position: , mismatch: 11, identity: 0.686

gattctgcttgtgattctgattctgcttgttcttt	CRISPR spacer
gattctgattctgattctgattctgaagaaatgtc	Protospacer
******* ** **************   .  . *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

211850 : 221178

Enterococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094127889.1\|211850_214022_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.4e-262	62.7
WP_050611661.1\|214002_214389_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	3.2e-13	34.4
WP_056977194.1\|214410_214641_-	glutaredoxin-like protein NrdH	X2KRY7	Enterococcus_phage	3.0e-11	41.6
WP_094127892.1\|214862_215471_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_094127895.1\|215472_215937_+	nucleoside deaminase	NA	NA	NA	NA
WP_094127898.1\|216172_217882_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.3e-58	39.3
WP_094127901.1\|217900_218218_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_056977199.1\|218246_218846_+	recombination protein RecR	NA	NA	NA	NA
WP_050611655.1\|218847_219102_+	DUF2508 domain-containing protein	NA	NA	NA	NA
WP_094127904.1\|219185_219830_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.6e-46	46.6
WP_094127907.1\|219843_220173_+	hypothetical protein	NA	NA	NA	NA
WP_094127910.1\|220182_221178_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	7.4e-38	34.8

DBSCAN-SWA_2

300219 : 386770

Lactobacillus_phage(20.51%)

protease,tRNA,head,portal,transposase,holin,capsid,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094128084.1\|300219_301431_+\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	1.7e-124	57.7
WP_094131305.1\|301579_302635_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_094128087.1\|302780_303884_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_050610763.1\|304094_305096_+	catabolite control protein A	NA	NA	NA	NA
WP_094128090.1\|305358_306165_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_094128093.1\|306165_307683_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_094128096.1\|307675_308407_+	lactate utilization protein C	NA	NA	NA	NA
WP_094128099.1\|308528_309404_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_094128102.1\|309438_309969_+	VanZ family protein	NA	NA	NA	NA
WP_050610757.1\|310052_310781_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_089144484.1\|310957_311866_+	ribokinase	NA	NA	NA	NA
WP_094128105.1\|311940_312903_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_094131307.1\|312918_314829_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.2e-07	46.5
WP_094128108.1\|315071_316040_+	competence protein ComG	NA	NA	NA	NA
WP_094128113.1\|317101_318484_-	recombinase family protein	A0A2H4J6X5	uncultured_Caudovirales_phage	2.9e-117	47.7
WP_094128116.1\|318945_319416_-	hypothetical protein	NA	NA	NA	NA
WP_094128119.1\|319626_320466_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_094128122.1\|320465_320795_-	XRE family transcriptional regulator	A0A0M4QX29	Bacillus_phage	5.5e-14	44.1
WP_094128125.1\|321031_321247_+	XRE family transcriptional regulator	A0A1S5SDM7	Streptococcus_phage	4.4e-12	55.0
WP_094131309.1\|321239_321956_+	phage regulatory protein	A0A0P0IDD0	Lactobacillus_phage	3.5e-66	57.7
WP_094128128.1\|322052_322250_+	hypothetical protein	NA	NA	NA	NA
WP_094128131.1\|322236_322536_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_094128134.1\|322549_323104_+	hypothetical protein	NA	NA	NA	NA
WP_094128137.1\|323241_323817_+	hypothetical protein	NA	NA	NA	NA
WP_094131311.1\|324041_325229_+	ATP-dependent helicase	A0A2H4J064	uncultured_Caudovirales_phage	7.6e-114	53.7
WP_094128140.1\|325212_325398_+	hypothetical protein	NA	NA	NA	NA
WP_094128143.1\|325397_325712_+	hypothetical protein	A0A1B1P7L0	Bacillus_phage	1.1e-11	37.5
WP_094128146.1\|325711_326125_+	VRR-NUC domain-containing protein	A0A2H4J095	uncultured_Caudovirales_phage	6.4e-20	45.0
WP_094128149.1\|326046_327801_+	NTP-binding protein	A0A2H4J7Q2	uncultured_Caudovirales_phage	6.1e-128	48.3
WP_094128152.1\|327820_328273_+	DUF669 domain-containing protein	A0A2H4J1S8	uncultured_Caudovirales_phage	4.9e-37	54.3
WP_094128155.1\|328359_330111_+	hypothetical protein	A0A1B1P7M5	Bacillus_phage	6.9e-172	53.3
WP_094128158.1\|330080_332012_+	hypothetical protein	H7BVJ4	unidentified_phage	1.8e-157	46.8
WP_094128161.1\|332008_332254_+	hypothetical protein	A0A0E3TAK6	Staphylococcus_phage	2.6e-08	48.1
WP_094128164.1\|332234_332825_+	HNH endonuclease	M1PKJ5	Streptococcus_phage	7.1e-20	33.9
WP_094128167.1\|332894_333083_+	hypothetical protein	NA	NA	NA	NA
WP_094128171.1\|333079_333685_+	hypothetical protein	H2A0H0	Bacteroides_phage	1.4e-23	38.0
WP_094128174.1\|333918_334311_+	hypothetical protein	A0A0S0N9G6	Pseudomonas_phage	2.0e-10	36.9
WP_094128177.1\|334312_334513_+	hypothetical protein	NA	NA	NA	NA
WP_094128180.1\|334512_334719_+	hypothetical protein	NA	NA	NA	NA
WP_094128183.1\|334715_334913_+	hypothetical protein	NA	NA	NA	NA
WP_094128186.1\|334912_335299_+	hypothetical protein	NA	NA	NA	NA
WP_094128189.1\|335326_335968_+	hypothetical protein	B0YL94	Streptococcus_virus	2.3e-16	33.5
WP_094128192.1\|335960_336149_+	hypothetical protein	NA	NA	NA	NA
WP_094128196.1\|336151_336355_+	hypothetical protein	NA	NA	NA	NA
WP_094128199.1\|336370_336835_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_094128203.1\|336835_337033_+	hypothetical protein	NA	NA	NA	NA
WP_094128206.1\|337026_337272_+	hypothetical protein	NA	NA	NA	NA
WP_094128209.1\|337268_337487_+	hypothetical protein	NA	NA	NA	NA
WP_094128212.1\|337483_337816_+	hypothetical protein	NA	NA	NA	NA
WP_094128215.1\|337799_338057_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_094128218.1\|338053_338470_+	hypothetical protein	NA	NA	NA	NA
WP_094128221.1\|339246_339477_+	hypothetical protein	NA	NA	NA	NA
WP_094131313.1\|339472_339799_+	HNH endonuclease	A0A0K2CZH3	Paenibacillus_phage	1.6e-18	45.0
WP_094128224.1\|339927_340380_+\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	1.7e-18	35.4
WP_094131315.1\|340369_342142_+\|terminase	terminase large subunit	F8J1B1	Lactobacillus_phage	7.2e-201	59.1
WP_094131317.1\|342217_343405_+\|portal	phage portal protein	A0A0U3SQF0	Bacillus_phage	2.8e-100	52.0
WP_094128227.1\|343331_344087_+\|protease	Clp protease ClpP	A0A0B5A796	Paenibacillus_phage	6.6e-71	60.6
WP_094128229.1\|344077_345205_+\|capsid	phage major capsid protein	A0A0C5AEH1	Paenibacillus_phage	7.8e-84	46.1
WP_094128232.1\|345423_345738_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_094128235.1\|345734_346073_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_094128238.1\|346086_346515_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_094128255.1\|346511_346880_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_094128258.1\|346899_347535_+\|tail	phage tail protein	A0A060AKE9	Staphylococcus_phage	5.6e-15	34.0
WP_094128261.1\|347534_347921_+	hypothetical protein	NA	NA	NA	NA
WP_094128264.1\|347968_348097_+	hypothetical protein	NA	NA	NA	NA
WP_094131319.1\|350542_352399_+	hypothetical protein	D6PSZ3	Lactobacillus_phage	7.6e-36	61.1
WP_094128267.1\|352410_353226_+\|tail	phage tail family protein	A0A0B5CTY7	Listeria_phage	4.3e-07	33.6
WP_094128270.1\|353225_354605_+	peptidase M23	A0A0M7RDS2	Lactobacillus_phage	3.5e-54	31.9
WP_094128273.1\|354608_355367_+\|holin	holin	A0A1U9WQS3	Geobacillus_phage	3.6e-16	32.7
WP_094128276.1\|355359_355806_+	hypothetical protein	NA	NA	NA	NA
WP_094128279.1\|355805_357152_+	DUF2479 domain-containing protein	NA	NA	NA	NA
WP_094128282.1\|357159_357669_+\|tail	phage tail protein	A0A288TYH2	Enterococcus_phage	3.2e-05	45.6
WP_094128285.1\|357674_358571_+	hypothetical protein	NA	NA	NA	NA
WP_094128288.1\|358584_359052_+	hypothetical protein	NA	NA	NA	NA
WP_094128291.1\|359070_359433_+	hypothetical protein	NA	NA	NA	NA
WP_089144865.1\|359433_359577_+	XkdX family protein	NA	NA	NA	NA
WP_094128294.1\|359626_359932_+	hypothetical protein	NA	NA	NA	NA
WP_089144867.1\|359928_360225_+	hypothetical protein	A0A0M7REJ4	Lactobacillus_phage	2.0e-07	51.6
WP_094128297.1\|360217_361498_+	LysM peptidoglycan-binding domain-containing protein	A0A0S2MYF3	Enterococcus_phage	3.3e-115	52.6
WP_094128300.1\|361694_361886_+	hypothetical protein	F8J1H1	Lactobacillus_phage	2.1e-05	45.5
WP_094128303.1\|361878_362346_+	DUF4065 domain-containing protein	Q9AZG0	Lactococcus_phage	1.2e-27	43.1
WP_094131321.1\|362392_362776_+	hypothetical protein	NA	NA	NA	NA
WP_094128306.1\|363428_363677_+	hypothetical protein	NA	NA	NA	NA
WP_094128309.1\|363666_364125_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_094128312.1\|364108_364357_+	hypothetical protein	NA	NA	NA	NA
WP_094128315.1\|364328_364811_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_094128318.1\|364815_365076_+	hypothetical protein	NA	NA	NA	NA
WP_094128321.1\|365146_366157_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_094128324.1\|366303_367665_+	amino acid permease	NA	NA	NA	NA
WP_094131323.1\|367849_368344_+	DUF1027 domain-containing protein	NA	NA	NA	NA
WP_094128327.1\|368355_369132_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_094128330.1\|369091_369757_+	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_050610811.1\|369802_370447_-	cytochrome o ubiquinol oxidase	NA	NA	NA	NA
WP_056977407.1\|370545_371556_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.3e-26	53.6
WP_094128333.1\|371680_372262_+	peptidylprolyl isomerase	A0A076FI46	Aureococcus_anophage	3.9e-23	39.4
WP_050610740.1\|372382_372772_+	general stress protein	NA	NA	NA	NA
WP_094128336.1\|380102_381290_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.1e-139	65.4
WP_094128339.1\|381517_384031_+	LysM peptidoglycan-binding domain-containing protein	A5A5E0	Lactobacillus_phage	2.2e-17	38.0
WP_094128342.1\|384352_386770_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	72.5

DBSCAN-SWA_3

415533 : 424551

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094128403.1\|415533_417756_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.3e-146	42.0
WP_094128406.1\|417731_419168_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.4e-59	34.2
WP_094128409.1\|419181_420228_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.4e-58	42.8
WP_094128412.1\|420232_420808_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-26	35.1
WP_094128415.1\|420822_422361_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	3.3e-69	45.1
WP_094128418.1\|422373_423639_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_094128421.1\|423711_424551_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.1e-47	39.7

DBSCAN-SWA_4

642588 : 682840

Lactobacillus_phage(62.5%)

integrase,portal,capsid,terminase,tail

attL 635523:635537|attR 663882:663896

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
635523:635537	attL	NA	NA	NA	NA
WP_094128865.1\|642588_643746_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	6.6e-62	35.6
WP_094128868.1\|643965_644751_-	DUF1828 domain-containing protein	Q6SEA4	Lactobacillus_prophage	5.0e-29	37.1
WP_094131347.1\|644737_644995_-	hypothetical protein	NA	NA	NA	NA
WP_094128871.1\|645324_645738_-	ImmA/IrrE family metallo-endopeptidase	E9LUL3	Lactobacillus_phage	4.8e-23	42.6
WP_094128874.1\|645738_646053_-	XRE family transcriptional regulator	X2CXD8	Lactobacillus_phage	4.6e-18	43.6
WP_094128877.1\|646586_646793_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_094128880.1\|647845_648112_+	hypothetical protein	NA	NA	NA	NA
WP_094128883.1\|648471_648729_+	hypothetical protein	NA	NA	NA	NA
WP_094128886.1\|648744_649743_+	hypothetical protein	E9LUM3	Lactobacillus_phage	1.7e-82	60.5
WP_094128889.1\|649742_650594_+	hypothetical protein	E9LUM4	Lactobacillus_phage	5.3e-61	46.2
WP_094128892.1\|650673_651492_+	DnaD domain protein	A0A1W6JNI1	Staphylococcus_phage	7.0e-34	55.6
WP_094128895.1\|651469_652279_+	ATP-binding protein	O03914	Lactobacillus_phage	2.1e-22	29.6
WP_094128898.1\|652606_652825_+	hypothetical protein	NA	NA	NA	NA
WP_094128901.1\|652992_653439_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_094128904.1\|653425_653635_+	hypothetical protein	NA	NA	NA	NA
WP_094128907.1\|653624_653933_+	hypothetical protein	NA	NA	NA	NA
WP_094128910.1\|653929_654157_+	hypothetical protein	NA	NA	NA	NA
WP_094128913.1\|654146_654596_+	hypothetical protein	NA	NA	NA	NA
WP_094128916.1\|654579_655041_+	DUF1064 domain-containing protein	A0A1S5RCT5	Lactobacillus_phage	3.7e-32	52.4
WP_094128919.1\|655551_656019_+	hypothetical protein	B8R690	Lactobacillus_phage	2.2e-16	34.0
WP_094128922.1\|656097_656763_+	hypothetical protein	NA	NA	NA	NA
WP_094128925.1\|656743_657871_+	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	1.3e-49	33.1
WP_094128928.1\|657949_658549_+	DUF4145 domain-containing protein	Q20DE2	Lactobacillus_phage	7.8e-51	51.3
WP_094128949.1\|659065_659905_+\|terminase	terminase	Q6SE85	Lactobacillus_prophage	9.9e-84	63.0
WP_094128952.1\|659897_661205_+\|terminase	PBSX family phage terminase large subunit	A4L7R3	Lactococcus_phage	1.1e-182	66.6
WP_094128955.1\|661218_662799_+\|portal	phage portal protein	U3PCP8	Lactobacillus_phage	3.0e-166	56.7
WP_094128958.1\|662755_664354_+	hypothetical protein	U3PFU0	Lactobacillus_phage	1.1e-107	54.1
663882:663896	attR	NA	NA	NA	NA
WP_094128961.1\|664350_664569_+	hypothetical protein	NA	NA	NA	NA
WP_094128964.1\|664616_664925_+	hypothetical protein	NA	NA	NA	NA
WP_094128966.1\|665024_665645_+	hypothetical protein	O03931	Lactobacillus_phage	3.9e-13	43.0
WP_094128969.1\|665660_666695_+	replication protein	O03966	Lactobacillus_phage	1.0e-151	77.3
WP_094128972.1\|666711_667098_+	hypothetical protein	Q5YA68	Bacillus_phage	6.9e-08	32.8
WP_094128975.1\|667091_667442_+\|capsid	minor capsid protein	O03932	Lactobacillus_phage	1.9e-25	44.8
WP_094128978.1\|667442_667823_+\|capsid	capsid protein	O03933	Lactobacillus_phage	8.3e-14	42.3
WP_094128981.1\|667812_668202_+\|capsid	minor capsid protein	O03934	Lactobacillus_phage	5.7e-18	40.3
WP_094131349.1\|668490_668769_+	hypothetical protein	O03972	Lactobacillus_phage	3.5e-14	51.6
WP_094128984.1\|668849_669284_+	hypothetical protein	NA	NA	NA	NA
WP_094128987.1\|669296_669935_+	hypothetical protein	O03936	Lactobacillus_phage	2.1e-22	36.8
WP_094128990.1\|669938_674597_+	hypothetical protein	A0A075KJK1	Lactobacillus_phage	1.0e-73	49.6
WP_094128993.1\|674583_675312_+	hypothetical protein	NA	NA	NA	NA
WP_094131351.1\|675362_677264_+	hypothetical protein	A0A1B2APX2	Phage_Wrath	1.8e-72	37.3
WP_094128996.1\|677280_678135_+	hypothetical protein	A0A1X9IGH6	Lactococcus_phage	2.2e-22	43.0
WP_094128998.1\|678142_678652_+\|tail	phage tail protein	A0A288TYH2	Enterococcus_phage	1.5e-05	45.6
WP_094129001.1\|678658_679105_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_094129005.1\|679118_679535_+	hypothetical protein	NA	NA	NA	NA
WP_094129008.1\|679564_679927_+	hypothetical protein	NA	NA	NA	NA
WP_089144865.1\|679927_680071_+	XkdX family protein	NA	NA	NA	NA
WP_094128294.1\|680120_680426_+	hypothetical protein	NA	NA	NA	NA
WP_089144867.1\|680422_680719_+	hypothetical protein	A0A0M7REJ4	Lactobacillus_phage	2.0e-07	51.6
WP_094128297.1\|680711_681992_+	LysM peptidoglycan-binding domain-containing protein	A0A0S2MYF3	Enterococcus_phage	3.3e-115	52.6
WP_094128300.1\|682188_682380_+	hypothetical protein	F8J1H1	Lactobacillus_phage	2.1e-05	45.5
WP_094128303.1\|682372_682840_+	DUF4065 domain-containing protein	Q9AZG0	Lactococcus_phage	1.2e-27	43.1

DBSCAN-SWA_5

908583 : 1021187

112

Bacillus_phage(13.33%)

tRNA,integrase,head,portal,transposase,holin,capsid,terminase,tail

attL 983116:983170|attR 1031975:1032029

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050612315.1\|908583_909885_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	7.4e-54	28.8
WP_094129489.1\|909898_911083_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_094129492.1\|911098_911596_-	hypothetical protein	NA	NA	NA	NA
WP_094129495.1\|911695_914473_-	hypothetical protein	A0A127AW80	Bacillus_phage	2.2e-31	24.8
WP_094129498.1\|914583_915573_+	mevalonate kinase	NA	NA	NA	NA
WP_089144171.1\|915544_916507_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_094129501.1\|916531_917599_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_094129504.1\|917610_918648_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_094129507.1\|918699_920070_-	RNA methyltransferase	NA	NA	NA	NA
WP_094129510.1\|920069_921053_-	hypothetical protein	NA	NA	NA	NA
WP_050612325.1\|921071_921395_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_094129513.1\|921404_922148_-	abhydrolase domain-containing 18	NA	NA	NA	NA
WP_094129516.1\|922317_923130_+	HAD family phosphatase	NA	NA	NA	NA
WP_050612328.1\|923183_924056_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.8e-75	51.7
WP_094129519.1\|924708_925272_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_094129522.1\|925321_925771_+	hypothetical protein	NA	NA	NA	NA
WP_094129525.1\|925831_927742_-	hypothetical protein	S5MNT2	Brevibacillus_phage	3.1e-40	37.9
WP_094129528.1\|927826_928495_-	hypothetical protein	NA	NA	NA	NA
WP_094131367.1\|929009_930089_-	hypothetical protein	NA	NA	NA	NA
WP_050612333.1\|930184_931057_-	YitT family protein	M1Q1P6	Streptococcus_phage	6.3e-17	26.9
WP_094129529.1\|931057_931582_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
WP_094129532.1\|931687_933457_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_094129535.1\|933460_934750_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_056977599.1\|935340_935916_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_094129538.1\|935918_937214_+	purine permease	NA	NA	NA	NA
WP_094129541.1\|937341_938226_+	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	1.1e-19	35.9
WP_094129544.1\|938237_938687_+	hypothetical protein	NA	NA	NA	NA
WP_094129547.1\|938724_939342_-	hypothetical protein	NA	NA	NA	NA
WP_094129549.1\|939345_940290_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_089144190.1\|940302_940740_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_094129552.1\|940752_942981_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1S6L1R3	Vibrio_phage	6.2e-08	34.8
WP_094129555.1\|943028_943361_-	hypothetical protein	NA	NA	NA	NA
WP_094129558.1\|943532_944270_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_094129561.1\|944272_945157_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_094129564.1\|945174_945654_-	DUF3013 domain-containing protein	NA	NA	NA	NA
WP_094129567.1\|945876_946794_-	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	3.1e-83	50.8
WP_094129570.1\|947042_948002_+	nucleoside hydrolase	NA	NA	NA	NA
WP_056977619.1\|948022_948373_+	hypothetical protein	NA	NA	NA	NA
WP_094129573.1\|948506_949610_-	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_094129576.1\|949626_950811_-	MFS transporter	NA	NA	NA	NA
WP_094129578.1\|950794_952123_-	hypothetical protein	NA	NA	NA	NA
WP_094129581.1\|952245_953139_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_094129584.1\|953135_953948_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_089145063.1\|954018_954918_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	7.4e-37	33.6
WP_094129587.1\|954914_955451_-\|transposase	transposase	NA	NA	NA	NA
WP_094129590.1\|955723_956182_+	hypothetical protein	NA	NA	NA	NA
WP_094129593.1\|956183_956564_+	hypothetical protein	NA	NA	NA	NA
WP_094129596.1\|956706_956907_-	hypothetical protein	NA	NA	NA	NA
WP_094129599.1\|956899_957151_-	hypothetical protein	NA	NA	NA	NA
WP_094129602.1\|958827_959943_-\|integrase	site-specific integrase	S6C485	Thermus_phage	9.2e-37	31.2
WP_094129606.1\|960114_960708_-	XRE family transcriptional regulator	A0A1P8VVN6	Streptococcus_phage	9.9e-06	44.6
WP_094129609.1\|960878_961133_+	hypothetical protein	NA	NA	NA	NA
WP_094129612.1\|961408_962383_+	hypothetical protein	A0A2H4JB92	uncultured_Caudovirales_phage	3.7e-26	33.4
WP_094129615.1\|962441_964133_+	hypothetical protein	A7J282	Streptococcus_phage	6.7e-23	27.0
WP_094129618.1\|964201_964432_+	hypothetical protein	NA	NA	NA	NA
WP_094129621.1\|964431_964761_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_094129624.1\|965054_965405_+	HNH endonuclease	X2KRF8	Campylobacter_phage	7.1e-12	41.9
WP_094129627.1\|965571_966021_+\|terminase	phage terminase small subunit P27 family	A0A1J0MG04	Staphylococcus_phage	1.6e-11	32.0
WP_094129629.1\|966022_967735_+\|terminase	terminase large subunit	E9LUI0	Lactobacillus_phage	1.1e-94	37.0
WP_094129632.1\|967879_968938_+\|portal	phage portal protein	Q8LTC2	Lactobacillus_phage	3.9e-13	24.6
WP_094129635.1\|968942_970430_+\|capsid	phage major capsid protein	Q9AZE1	Lactococcus_phage	1.5e-26	46.7
WP_094129638.1\|970429_970693_+\|head,tail	phage gp6-like head-tail connector protein	A0A0M4S687	Enterococcus_phage	2.6e-06	33.7
WP_094129641.1\|970786_971200_+	hypothetical protein	NA	NA	NA	NA
WP_094129644.1\|971820_972840_-	glycosyl transferase	NA	NA	NA	NA
WP_094129648.1\|973002_973506_+	hypothetical protein	NA	NA	NA	NA
WP_094129651.1\|975676_975868_+	hypothetical protein	NA	NA	NA	NA
WP_094129654.1\|976041_976248_-	hypothetical protein	NA	NA	NA	NA
WP_094129657.1\|976406_976679_-	hypothetical protein	NA	NA	NA	NA
WP_094129660.1\|976681_976960_-	hypothetical protein	NA	NA	NA	NA
WP_094129663.1\|977354_977555_-	hypothetical protein	NA	NA	NA	NA
WP_094129666.1\|979073_979322_-	hypothetical protein	S5VXZ8	Leptospira_phage	7.3e-11	42.3
WP_094129669.1\|979671_981537_-	hypothetical protein	NA	NA	NA	NA
WP_089145063.1\|981681_982581_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	7.4e-37	33.6
WP_094129587.1\|982577_983114_-\|transposase	transposase	NA	NA	NA	NA
983116:983170	attL	NA	NA	NA	NA
WP_094129672.1\|983227_983446_-	hypothetical protein	NA	NA	NA	NA
WP_003709292.1\|983757_984681_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	1.1e-32	31.7
WP_094129674.1\|984696_985380_-	hypothetical protein	NA	NA	NA	NA
WP_094129677.1\|985386_986502_-	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	5.9e-169	78.9
WP_094129680.1\|986521_987868_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_094129683.1\|987887_989402_-	carnitine transporter	NA	NA	NA	NA
WP_094129685.1\|989391_990120_-\|holin	choline kinase	NA	NA	NA	NA
WP_094129688.1\|990112_991864_-\|holin	choline kinase	NA	NA	NA	NA
WP_094129691.1\|992134_993340_+	acyltransferase	NA	NA	NA	NA
WP_094129693.1\|993615_994308_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_094129696.1\|994427_995183_+\|integrase	integrase	NA	NA	NA	NA
WP_094129698.1\|995347_996208_-	hypothetical protein	NA	NA	NA	NA
WP_094129701.1\|996174_996876_-	hypothetical protein	NA	NA	NA	NA
WP_094129705.1\|996948_997305_-	hypothetical protein	NA	NA	NA	NA
WP_094129708.1\|997589_998411_-	LicD family protein	A0A1V0SD50	Indivirus	6.2e-06	31.3
WP_094129711.1\|998427_999270_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_094129714.1\|999334_1000474_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	K7YFA0	Megavirus	9.7e-34	30.8
WP_094129717.1\|1000491_1001580_-	hypothetical protein	NA	NA	NA	NA
WP_094129720.1\|1001584_1003063_-	flippase	NA	NA	NA	NA
WP_094129723.1\|1003090_1004359_-	hypothetical protein	NA	NA	NA	NA
WP_094129726.1\|1004477_1005479_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_094129729.1\|1005506_1006421_-	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	5.8e-29	39.7
WP_089144636.1\|1006477_1007509_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.1e-59	39.2
WP_094129732.1\|1007520_1008102_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A218MN57	uncultured_virus	3.6e-32	46.0
WP_094129735.1\|1008120_1008990_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	4.0e-104	60.8
WP_094129738.1\|1009117_1009843_-	hypothetical protein	NA	NA	NA	NA
WP_094129741.1\|1009844_1010897_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_094129743.1\|1010899_1011628_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_094129746.1\|1011657_1012725_-	glycosyl transferase	NA	NA	NA	NA
WP_094129749.1\|1012753_1013404_-	sugar transferase	NA	NA	NA	NA
WP_094129752.1\|1013485_1014256_-	tyrosine protein phosphatase	NA	NA	NA	NA
WP_094129755.1\|1014262_1015000_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_094129759.1\|1015012_1015774_-	chain-length determining protein	NA	NA	NA	NA
WP_094129762.1\|1016360_1017656_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_050612398.1\|1017726_1017915_-	hypothetical protein	NA	NA	NA	NA
WP_094129765.1\|1018090_1019527_+	dipeptidase	NA	NA	NA	NA
WP_094129768.1\|1019537_1020395_+	hypothetical protein	NA	NA	NA	NA
WP_094075311.1\|1020482_1021187_+\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	3.1e-30	38.8
1031975:1032029	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1032029 : 1081609

Bacillus_phage(14.29%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094129587.1\|1032029_1032566_+\|transposase	transposase	NA	NA	NA	NA
WP_089145063.1\|1032562_1033462_+\|transposase	transposase	A0A1B1P773	Bacillus_phage	7.4e-37	33.6
WP_094129786.1\|1033529_1034315_-	hypothetical protein	NA	NA	NA	NA
WP_056976887.1\|1034295_1034511_-	transcriptional regulator	S5M643	Brevibacillus_phage	8.8e-05	43.4
WP_050612409.1\|1034799_1035282_+	hypothetical protein	NA	NA	NA	NA
WP_094129789.1\|1035278_1037393_+	ferrous iron transport protein B	NA	NA	NA	NA
WP_082174247.1\|1037393_1037552_+	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_094129792.1\|1037703_1038267_+	hypothetical protein	NA	NA	NA	NA
WP_094129797.1\|1038602_1038941_+	hypothetical protein	NA	NA	NA	NA
WP_082618700.1\|1038912_1039353_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	5.8e-43	63.6
WP_094129802.1\|1039418_1040816_+\|transposase	transposase	NA	NA	NA	NA
WP_094129805.1\|1041198_1041528_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_094129808.1\|1041939_1043529_+	asparagine synthase B	A0A0G2Y369	Acanthamoeba_polyphaga_mimivirus	3.9e-97	39.9
WP_094129811.1\|1043725_1044382_-	class A sortase	NA	NA	NA	NA
WP_094129814.1\|1044399_1045707_-	GTPase ObgE	NA	NA	NA	NA
WP_089144332.1\|1045784_1047563_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_094129817.1\|1047700_1048579_-	elongation factor Ts	NA	NA	NA	NA
WP_094129820.1\|1048678_1049479_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_094129823.1\|1049643_1050636_-	lactate dehydrogenase	M1HMI7	Paramecium_bursaria_Chlorella_virus	2.2e-42	33.8
WP_050612421.1\|1050785_1051058_-	hypothetical protein	NA	NA	NA	NA
WP_050612422.1\|1051044_1051800_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_089144335.1\|1051878_1052508_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_050612424.1\|1052611_1052836_-	hypothetical protein	NA	NA	NA	NA
WP_094129826.1\|1052916_1053171_-	DUF896 family protein	NA	NA	NA	NA
WP_050612426.1\|1053315_1053939_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.8e-12	52.9
WP_094129829.1\|1053988_1055680_-	DNA repair protein RecN	NA	NA	NA	NA
WP_056976873.1\|1055698_1056160_-	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_094129833.1\|1056196_1057018_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_094129836.1\|1057020_1057914_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_056976870.1\|1057906_1058137_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_094129839.1\|1058136_1059480_-	exodeoxyribonuclease VII large subunit	A0A160DEV2	Gordonia_phage	3.6e-27	32.2
WP_094129842.1\|1059469_1060330_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.8e-33	39.8
WP_050612434.1\|1060453_1060864_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_050612435.1\|1060863_1061295_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_050612436.1\|1061323_1061881_-	elongation factor P	NA	NA	NA	NA
WP_094129845.1\|1061973_1063038_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_094129848.1\|1063429_1064386_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_050612439.1\|1064559_1064841_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_056976526.1\|1064861_1065188_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_050612441.1\|1065205_1065514_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_089144344.1\|1065817_1066909_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_089144345.1\|1067229_1067679_-	hypothetical protein	NA	NA	NA	NA
WP_094129851.1\|1067681_1068659_-	hypothetical protein	NA	NA	NA	NA
WP_094129854.1\|1068651_1069536_-	exonuclease SbcC	NA	NA	NA	NA
WP_094129857.1\|1069744_1070902_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_050612447.1\|1071005_1071281_+	acylphosphatase	NA	NA	NA	NA
WP_056976520.1\|1071372_1072299_+	hypothetical protein	NA	NA	NA	NA
WP_094129860.1\|1072344_1073856_-	sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	4.5e-10	25.8
WP_050612450.1\|1073857_1074544_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	30.2
WP_050612451.1\|1074743_1076165_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	7.9e-41	29.0
WP_094129864.1\|1076290_1077526_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.3e-134	57.0
WP_056941552.1\|1077619_1078669_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.8e-42	34.0
WP_050612453.1\|1078950_1080264_-	trigger factor	NA	NA	NA	NA
WP_094129868.1\|1080421_1081609_-	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	8.9e-30	29.5

DBSCAN-SWA_7

1376824 : 1451721

Streptococcus_phage(31.25%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094075311.1\|1376824_1377529_+\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	3.1e-30	38.8
WP_094127723.1\|1377558_1378386_+	DDE domain-containing protein	NA	NA	NA	NA
WP_089144104.1\|1378438_1379464_-	putative sulfate exporter family transporter	NA	NA	NA	NA
WP_089144103.1\|1379572_1380445_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.9e-06	23.7
WP_094130331.1\|1387065_1389129_-	LTA synthase family protein	W6LM83	Streptococcus_phage	3.1e-147	45.5
WP_050610950.1\|1389242_1389476_-	DUF1797 domain-containing protein	NA	NA	NA	NA
WP_056975973.1\|1389661_1390678_-	TIGR00374 family protein	NA	NA	NA	NA
WP_094130334.1\|1390796_1391813_-	glycosyltransferase	NA	NA	NA	NA
WP_094130337.1\|1391839_1393024_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_094130340.1\|1393214_1394933_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_050610945.1\|1394932_1395202_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_056975965.1\|1395399_1395588_-	hypothetical protein	NA	NA	NA	NA
WP_094130343.1\|1395786_1397976_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	1.1e-118	37.6
WP_050610942.1\|1398138_1398423_+	DUF1827 domain-containing protein	NA	NA	NA	NA
WP_094130346.1\|1398602_1399649_+	hypothetical protein	NA	NA	NA	NA
WP_094130349.1\|1399677_1401516_-	glycoside hydrolase family 13 protein	NA	NA	NA	NA
WP_094130352.1\|1401496_1403935_-	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.7e-11	36.8
WP_094130354.1\|1404043_1405480_-	glycogen synthase GlgA	NA	NA	NA	NA
WP_094130356.1\|1405484_1406630_-	glucose-1-phosphate adenylyltransferase subunit GlgD	NA	NA	NA	NA
WP_089145041.1\|1406619_1407762_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_094131406.1\|1407823_1409758_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_089145040.1\|1410182_1410497_-	hypothetical protein	NA	NA	NA	NA
WP_056975951.1\|1410782_1411031_+	hypothetical protein	NA	NA	NA	NA
WP_094130359.1\|1411106_1412462_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_094130362.1\|1412488_1413637_-	hypothetical protein	NA	NA	NA	NA
WP_050610932.1\|1413633_1414476_-	TIGR00159 family protein	NA	NA	NA	NA
WP_094130365.1\|1414678_1415353_+	DUF1361 domain-containing protein	NA	NA	NA	NA
WP_050610930.1\|1415425_1416334_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_094130368.1\|1416463_1417003_+	exonuclease	A0A1S5SEW3	Streptococcus_phage	1.9e-24	40.0
WP_094130371.1\|1417058_1417946_-	ABC transporter permease	NA	NA	NA	NA
WP_050610927.1\|1417926_1418622_-	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	5.9e-26	33.0
WP_099049334.1\|1418703_1419832_-	peptide chain release factor 2	NA	NA	NA	NA
WP_094130377.1\|1419895_1422259_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_094130381.1\|1422433_1422988_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_094130385.1\|1423148_1423853_-	ComF family protein	NA	NA	NA	NA
WP_094130388.1\|1423845_1425174_-	DNA/RNA helicase	A0A1X9I5S6	Streptococcus_phage	7.3e-73	42.9
WP_094130391.1\|1425232_1425880_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.6e-39	43.4
WP_089144732.1\|1425918_1427037_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_089144733.1\|1427234_1429070_-	APC family permease	NA	NA	NA	NA
WP_050610917.1\|1429334_1430954_-	chaperonin GroEL	A0A240F779	uncultured_virus	8.1e-159	54.7
WP_094130394.1\|1430992_1431277_-	co-chaperone GroES	A0A221S3C8	uncultured_virus	5.8e-12	40.9
WP_094130396.1\|1431480_1432116_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_050610914.1\|1432157_1432802_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_094130399.1\|1433031_1435020_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	4.6e-47	28.0
WP_094130402.1\|1435253_1436612_+	HNH endonuclease	NA	NA	NA	NA
WP_094131408.1\|1436682_1437495_-	hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_050610910.1\|1438150_1438519_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_050610909.1\|1438580_1439084_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_094130405.1\|1439293_1439935_-\|bacteriocin	bacteriocin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-25	36.2
WP_094130408.1\|1439927_1441994_-	hypothetical protein	NA	NA	NA	NA
WP_094130410.1\|1442027_1442483_-	hypothetical protein	NA	NA	NA	NA
WP_050610907.1\|1442690_1443383_-	50S ribosomal protein L1	NA	NA	NA	NA
WP_050610906.1\|1443493_1443919_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_094130412.1\|1444140_1444956_+	hypothetical protein	NA	NA	NA	NA
WP_094130414.1\|1444986_1445658_-	phosphoglycerate mutase	NA	NA	NA	NA
WP_094128766.1\|1445848_1447180_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.5e-49	32.1
WP_094130416.1\|1447286_1448444_-	hypothetical protein	D2KRB9	Lactobacillus_phage	8.7e-14	40.0
WP_056975906.1\|1448662_1449685_-	EamA/RhaT family transporter	NA	NA	NA	NA
WP_094130417.1\|1449700_1450651_-	malate transporter	NA	NA	NA	NA
WP_094130419.1\|1450821_1451721_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	2.2e-36	33.6

DBSCAN-SWA_8

1570663 : 1636820

Lactobacillus_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094131426.1\|1570663_1571881_+\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	9.2e-123	57.7
WP_094130550.1\|1572164_1572401_-	cytochrome B5	NA	NA	NA	NA
WP_050610732.1\|1572481_1573435_-	peroxidase	NA	NA	NA	NA
WP_089144407.1\|1573796_1574357_+	ABC transporter permease	NA	NA	NA	NA
WP_094130552.1\|1574356_1575760_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_094130554.1\|1575752_1576418_+	ABC transporter permease	NA	NA	NA	NA
WP_050610728.1\|1576590_1576770_-	hypothetical protein	NA	NA	NA	NA
WP_094130556.1\|1576902_1577538_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3XCL7	Enterococcus_phage	9.0e-21	41.6
WP_094130558.1\|1578098_1578464_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_094130560.1\|1578515_1579223_-	hypothetical protein	NA	NA	NA	NA
WP_094130562.1\|1579347_1579983_+	hypothetical protein	NA	NA	NA	NA
WP_094130473.1\|1579955_1580660_+\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	6.9e-30	38.8
WP_094130475.1\|1580689_1581517_+	DDE domain-containing protein	NA	NA	NA	NA
WP_094130564.1\|1581556_1581937_+	hypothetical protein	NA	NA	NA	NA
WP_094130566.1\|1582034_1583402_-	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_094130568.1\|1583447_1583822_-	hypothetical protein	NA	NA	NA	NA
WP_094130570.1\|1583920_1585015_+	phosphoesterase	NA	NA	NA	NA
WP_094130572.1\|1585057_1585855_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_094130574.1\|1585900_1586614_-	HAD family phosphatase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	1.1e-14	29.9
WP_094130576.1\|1586616_1587099_-	N-acetyltransferase	NA	NA	NA	NA
WP_094130578.1\|1587207_1587894_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_094130580.1\|1587983_1589174_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_094130582.1\|1589175_1590243_-	AI-2E family transporter	NA	NA	NA	NA
WP_094130584.1\|1590387_1591281_+	hypothetical protein	NA	NA	NA	NA
WP_094130586.1\|1591354_1592206_-	hypothetical protein	NA	NA	NA	NA
WP_094130588.1\|1592395_1593445_-	galactose mutarotase	NA	NA	NA	NA
WP_050610703.1\|1593870_1594173_+	hypothetical protein	NA	NA	NA	NA
WP_089145142.1\|1594292_1595294_-	UDP-glucose 4-epimerase GalE	A0A1V0SG19	Hokovirus	3.0e-47	36.6
WP_094130590.1\|1595492_1596218_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_094130592.1\|1596369_1598739_+	phosphoketolase family protein	NA	NA	NA	NA
WP_094128766.1\|1598885_1600217_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	2.5e-49	32.1
WP_089145139.1\|1600491_1600920_+	hypothetical protein	NA	NA	NA	NA
WP_094130594.1\|1600981_1601572_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_094130596.1\|1601617_1602805_-	MFS transporter	NA	NA	NA	NA
WP_094130598.1\|1602936_1603782_+	D-amino acid aminotransferase	NA	NA	NA	NA
WP_094130599.1\|1603823_1604669_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_094130601.1\|1605157_1605673_+	hypothetical protein	NA	NA	NA	NA
WP_094130603.1\|1605719_1606202_+	hypothetical protein	NA	NA	NA	NA
WP_094130605.1\|1606241_1606760_-	N-acetyltransferase	NA	NA	NA	NA
WP_050610691.1\|1606875_1607364_-	hypothetical protein	NA	NA	NA	NA
WP_094130607.1\|1607408_1607909_-	hypothetical protein	NA	NA	NA	NA
WP_094130608.1\|1608000_1608522_-\|tRNA	tRNA (uracil-5-)-methyltransferase	NA	NA	NA	NA
WP_094130610.1\|1608521_1612238_-	hypothetical protein	NA	NA	NA	NA
WP_094130612.1\|1613033_1614008_-	hypothetical protein	NA	NA	NA	NA
WP_094130614.1\|1614032_1616450_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	7.3e-305	65.0
WP_094051178.1\|1616464_1617019_-	NADPH-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	7.8e-53	58.0
WP_094130616.1\|1617183_1618764_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_094130618.1\|1618868_1620227_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_094130620.1\|1620239_1621091_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_094130622.1\|1621187_1622294_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA
WP_089145063.1\|1627725_1628625_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	7.4e-37	33.6
WP_094129587.1\|1628621_1629158_-\|transposase	transposase	NA	NA	NA	NA
WP_094130624.1\|1629238_1629736_-	hypothetical protein	NA	NA	NA	NA
WP_094130625.1\|1629811_1631410_-	APC family permease	NA	NA	NA	NA
WP_089144780.1\|1631556_1632201_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_094130627.1\|1632387_1633575_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.2e-27	35.6
WP_094130630.1\|1633588_1635322_+	glycine/betaine ABC transporter permease	NA	NA	NA	NA
WP_094130632.1\|1635443_1635794_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_094130634.1\|1636133_1636820_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	3.5e-127	99.1

DBSCAN-SWA_9

1672049 : 1696075

Bacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094129587.1\|1672049_1672586_+\|transposase	transposase	NA	NA	NA	NA
WP_094130303.1\|1672582_1673482_+\|transposase	transposase	A0A1B1P773	Bacillus_phage	1.3e-36	33.6
WP_094130700.1\|1673541_1674534_-	nucleoid-associated protein	NA	NA	NA	NA
WP_094130702.1\|1674624_1676007_-	argininosuccinate lyase	NA	NA	NA	NA
WP_094051187.1\|1676006_1677215_-	argininosuccinate synthase	NA	NA	NA	NA
WP_094129587.1\|1677490_1678027_+\|transposase	transposase	NA	NA	NA	NA
WP_089145063.1\|1678023_1678923_+\|transposase	transposase	A0A1B1P773	Bacillus_phage	7.4e-37	33.6
WP_094130705.1\|1679200_1680352_+\|transposase	transposase	C1KFS0	Lactobacillus_virus	2.7e-92	46.4
WP_089144660.1\|1680752_1681730_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	6.8e-44	34.6
WP_094130707.1\|1682050_1683676_+	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_056976739.1\|1683697_1684669_+	malate permease	NA	NA	NA	NA
WP_094130709.1\|1684764_1684980_-	addiction module antidote protein, HigA family	M9MUN2	Rhodococcus_phage	3.8e-08	49.1
WP_094130711.1\|1685672_1686926_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.0e-105	51.8
WP_050611608.1\|1686930_1687737_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-44	41.6
WP_094130713.1\|1687917_1688826_-	PAS domain S-box protein	NA	NA	NA	NA
WP_094130715.1\|1688853_1691910_-	hypothetical protein	NA	NA	NA	NA
WP_094130717.1\|1692512_1694630_-	ornithine decarboxylase	NA	NA	NA	NA
WP_094130718.1\|1694923_1696075_+\|transposase	transposase	C1KFS0	Lactobacillus_virus	3.8e-94	47.2

DBSCAN-SWA_10

1714379 : 1759369

Streptococcus_phage(35.29%)

integrase,bacteriocin,transposase

attL 1721951:1721966|attR 1763295:1763310

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094130744.1\|1714379_1715597_-\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	7.0e-123	57.5
WP_050611629.1\|1715960_1716491_+	folate family ECF transporter S component	NA	NA	NA	NA
WP_094130745.1\|1716545_1717130_-	uracil-DNA glycosylase	NA	NA	NA	NA
WP_094130746.1\|1717263_1718442_-	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	7.8e-95	44.1
WP_094130748.1\|1718445_1719531_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.4e-93	49.7
WP_094130750.1\|1720094_1721519_+	LysM peptidoglycan-binding domain-containing protein	D2KRB9	Lactobacillus_phage	2.3e-16	40.2
WP_094130752.1\|1721578_1722082_-	hypothetical protein	NA	NA	NA	NA
1721951:1721966	attL	NA	NA	NA	NA
WP_094130754.1\|1722672_1723065_-	hypothetical protein	NA	NA	NA	NA
WP_094130756.1\|1723084_1724863_-	alpha-glycosidase	NA	NA	NA	NA
WP_094130758.1\|1725069_1726449_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_094130760.1\|1726584_1729209_+	cation-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	1.2e-58	27.7
WP_094130762.1\|1729543_1730698_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_094130764.1\|1730706_1731951_-	ABC transporter permease	NA	NA	NA	NA
WP_094130766.1\|1731943_1732834_-	sodium ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-19	27.8
WP_089144531.1\|1732936_1733236_-	hypothetical protein	NA	NA	NA	NA
WP_094130768.1\|1733311_1734019_-	hypothetical protein	NA	NA	NA	NA
WP_094130770.1\|1734160_1735186_-	helix-turn-helix domain-containing protein	A0A1L2BY83	Clostridium_phage	5.3e-07	44.3
WP_094130772.1\|1735371_1738344_-	DUF3427 domain-containing protein	A0A097BY72	Enterococcus_phage	2.9e-29	25.5
WP_056976732.1\|1738330_1738753_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_094130774.1\|1738905_1739985_-	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_094129587.1\|1740305_1740842_+\|transposase	transposase	NA	NA	NA	NA
WP_089145063.1\|1740838_1741738_+\|transposase	transposase	A0A1B1P773	Bacillus_phage	7.4e-37	33.6
WP_094130776.1\|1741812_1742388_-	hypothetical protein	NA	NA	NA	NA
WP_094130778.1\|1742817_1743753_-	restriction endonuclease	NA	NA	NA	NA
WP_094130780.1\|1743950_1745858_-	cadmium-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.8e-93	37.4
WP_094130782.1\|1745857_1746226_-	copper-binding protein	NA	NA	NA	NA
WP_094130784.1\|1746385_1746676_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_094130786.1\|1746838_1747165_+	hypothetical protein	NA	NA	NA	NA
WP_027826419.1\|1747520_1747790_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_094130787.1\|1748004_1748769_-	hypothetical protein	A0A1B1P773	Bacillus_phage	1.2e-30	33.6
WP_094130789.1\|1748768_1749305_-\|transposase	transposase	NA	NA	NA	NA
WP_094130791.1\|1749369_1751289_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	98.3
WP_011058339.1\|1751304_1751391_-	tetracycline resistance protein	NA	NA	NA	NA
WP_078377190.1\|1751665_1752604_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.9e-83	56.6
WP_000768372.1\|1752611_1753634_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	3.1e-132	75.5
WP_094130793.1\|1753630_1755658_-	hypothetical protein	A0A1S5SF30	Streptococcus_phage	2.3e-195	65.5
WP_094130795.1\|1756390_1757290_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	2.2e-36	33.6
WP_094130797.1\|1757286_1757823_-\|transposase	transposase	NA	NA	NA	NA
WP_094130799.1\|1758184_1759369_-\|integrase	site-specific integrase	Q6SEA7	Lactobacillus_prophage	8.3e-44	34.5
1763295:1763310	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2091182 : 2098242

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094131177.1\|2091182_2092226_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-16	29.6
WP_094131179.1\|2092248_2093205_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.6e-21	33.3
WP_094131181.1\|2093553_2094771_-\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	5.9e-122	57.6
WP_089145165.1\|2094927_2095617_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	3.3e-37	37.6
WP_094131183.1\|2095630_2096788_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	6.6e-30	32.0
WP_094131185.1\|2096910_2098242_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	4.1e-15	25.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP016766.1|WP_094129672.1|983227_983446_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP016766.1|WP_094129672.1|983227_983446_-|hypothetical-protein

983227_983446_-

72 aa aa

HTH_38

Identity	Hit_domain_coverage
0.43902439024390244	0.9318181818181818

908583-1021187

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP016766_2	Orphan	2.1\|957604\|38\|NZ_CP016766\|PILER-CR,CRISPRCasFinder,CRT	957604-957641	38	971551-971588	0

1. spacer 2.1|957604|38|NZ_CP016766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016766 position: 971551-971588, mismatch: 0

cgtttagaacgtcccaaaacattataaaaccctatcta	CRISPR spacer
cgtttagaacgtcccaaaacattataaaaccctatcta	Protospacer
**************************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016766

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information