CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016753	Leptotrichia sp. oral taxon 498 strain F0590 chromosome, complete genome	4 crisprs	cas14j,cas14k,cas3,csa3,WYL,DEDDh,csx1,csx20,cas1,cas2,cas4,cas10,csx10gr5,csm3gr7,cas6,PD-DExK,DinG	0	3	6	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016753_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016753_1

146094-147323

Orphan

I-B

Consensus_repeat	Method
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	PILER-CR
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CRISPRCasFinder
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CRT

16 spacers

The CRISPR arrays of NZ_CP016753_1

>merge|NZ_CP016753|1|146094-147323|PILER-CR,CRISPRCasFinder,CRT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACTTATTTTTCACATATGTATAATGTATATCTATTAGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACCTAAATCCATAAACATCGGTTTTCCATCTTTCCTTTTAGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACTTTTAGGAATATCTTTCATACTGAATGTACCGTGCTCTCTTGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACAGACTATCTAAAGAGTTTAAAGCTATACCAGCAGATGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACGTATAATCTCTTTTTTCAAAGTCAATCTTTCCTTTGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACTTATCTATATTTGTAGATACTTCATAATTTGTATTTACGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACTTTTTCTTTTTTTCCTAATCCAAACATTTTTCTACCTCGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACTATTACACAGATGTACCGATTTATTTAATGGTTAATTGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACACATTGGTTTAGAATCCCAAATACCATTTTTAGTAAGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACCTATTCAACAGTATCAACAACAACAAGGACAAGTACAGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACTTAAATTTCCAATCTAATGTTAATGTATTTGTAGGTATTAGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACGTTCTTGGTACAGAGTTGATATCGTATAATTTCACTTTCATGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACGTTCTTGGTACAGAGTTGATATCGTATAATTTCACTTTCATGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACCTTTCTCCTTTCCGATAGCACTCTGCCATCGGTGTAAAGAGTGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAACCCATAATTTTTAATTATTCCTTTAATTCTGTAACGTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAACTTATCCAATATGGATCTATATTCCCATAGTCCGTTAAAGTAGTGAATCCATTAAAACAAGGATAAAAAA

>NZ_CP016753|1|1|146094-146870|PILER-CR
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTATTTTTCACATATGTATAATGTATATCTATTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTAAATCCATAAACATCGGTTTTCCATCTTTCCTTTTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTTTAGGAATATCTTTCATACTGAATGTACCGTGCTCTCTT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	AGACTATCTAAAGAGTTTAAAGCTATACCAGCAGAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTATAATCTCTTTTTTCAAAGTCAATCTTTCCTTT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTATCTATATTTGTAGATACTTCATAATTTGTATTTAC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTTTTCTTTTTTTCCTAATCCAAACATTTTTCTACCTC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TATTACACAGATGTACCGATTTATTTAATGGTTAATT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	ACATTGGTTTAGAATCCCAAATACCATTTTTAGTAA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTATTCAACAGTATCAACAACAACAAGGACAAGTACA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC

>NZ_CP016753|1|1|146094-147323|CRISPRCasFinder
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTATTTTTCACATATGTATAATGTATATCTATTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTAAATCCATAAACATCGGTTTTCCATCTTTCCTTTTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTTTAGGAATATCTTTCATACTGAATGTACCGTGCTCTCTT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	AGACTATCTAAAGAGTTTAAAGCTATACCAGCAGAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTATAATCTCTTTTTTCAAAGTCAATCTTTCCTTT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTATCTATATTTGTAGATACTTCATAATTTGTATTTAC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTTTTCTTTTTTTCCTAATCCAAACATTTTTCTACCTC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TATTACACAGATGTACCGATTTATTTAATGGTTAATT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	ACATTGGTTTAGAATCCCAAATACCATTTTTAGTAA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTATTCAACAGTATCAACAACAACAAGGACAAGTACA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTAAATTTCCAATCTAATGTTAATGTATTTGTAGGTATTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTTCTTGGTACAGAGTTGATATCGTATAATTTCACTTTCAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTTCTTGGTACAGAGTTGATATCGTATAATTTCACTTTCAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTTTCTCCTTTCCGATAGCACTCTGCCATCGGTGTAAAGAGT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CCATAATTTTTAATTATTCCTTTAATTCTGTAAC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAA	CTTATCCAATATGGATCTATATTCCCATAGTCC
GTTAAAGTAGTGAATCCATTAAAACAAGGATAAAAAA

>NZ_CP016753|1|1|146094-147323|CRT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTATTTTTCACATATGTATAATGTATATCTATTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTAAATCCATAAACATCGGTTTTCCATCTTTCCTTTTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTTTAGGAATATCTTTCATACTGAATGTACCGTGCTCTCTT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	AGACTATCTAAAGAGTTTAAAGCTATACCAGCAGAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTATAATCTCTTTTTTCAAAGTCAATCTTTCCTTT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTATCTATATTTGTAGATACTTCATAATTTGTATTTAC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTTTTCTTTTTTTCCTAATCCAAACATTTTTCTACCTC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TATTACACAGATGTACCGATTTATTTAATGGTTAATT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	ACATTGGTTTAGAATCCCAAATACCATTTTTAGTAA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTATTCAACAGTATCAACAACAACAAGGACAAGTACA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	TTAAATTTCCAATCTAATGTTAATGTATTTGTAGGTATTA
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTTCTTGGTACAGAGTTGATATCGTATAATTTCACTTTCAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	GTTCTTGGTACAGAGTTGATATCGTATAATTTCACTTTCAT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CTTTCTCCTTTCCGATAGCACTCTGCCATCGGTGTAAAGAGT
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAC	CCATAATTTTTAATTATTCCTTTAATTCTGTAAC
GTTAAAGTAGTGAATCCATTAAAATAAGGATTGAAAA	CTTATCCAATATGGATCTATATTCCCATAGTCC
GTTAAAGTAGTGAATCCATTAAAACAAGGATAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016753.1\|WP_094079061.1\|132170_136190_-\|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl\|CDD\|234794
NZ_CP016753.1\|WP_094079063.1\|140046_140415_-\|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl\|CDD\|234671
NZ_CP016753.1\|WP_094079073.1\|152617_153886_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP016753.1\|WP_094079070.1\|148705_150067_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|100095
NZ_CP016753.1\|WP_094079067.1\|144577_145603_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813
NZ_CP016753.1\|WP_094079060.1\|131521_132067_-\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP016753.1\|WP_094079058.1\|128148_129327_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
NZ_CP016753.1\|WP_172826451.1\|151708_152392_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP016753.1\|WP_094079062.1\|136259_139706_-\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|234749
NZ_CP016753.1\|WP_094079059.1\|131265_131478_-\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP016753.1\|WP_094079066.1\|143244_144528_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	unknown	unknown	gnl\|CDD\|274398
NZ_CP016753.1\|WP_172826452.1\|155891_157454_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|274111
NZ_CP016753.1\|WP_094079065.1\|141361_143032_+\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511
NZ_CP016753.1\|WP_094079071.1\|150104_151697_-\|HAMP-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_CP016753.1\|WP_094079075.1\|155397_155850_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP016753.1\|WP_094079068.1\|147630_148065_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP016753.1\|WP_094079064.1\|140462_140972_-\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
NZ_CP016753.1\|WP_094079074.1\|153930_155373_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP016753.1\|WP_094079069.1\|148078_148477_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP016753.1\|WP_094079076.1\|157613_158255_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|239312

Protein	Function_ID	Function_description	E-value
NZ_CP016753.1\|WP_094079061.1\|132170_136190_-\|DNA-directed-RNA-polymerase-subunit-beta'	gnl\|CDD\|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NZ_CP016753.1\|WP_094079063.1\|140046_140415_-\|50S-ribosomal-protein-L7/L12	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	6.88818e-44
NZ_CP016753.1\|WP_094079073.1\|152617_153886_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	8.35547e-134
NZ_CP016753.1\|WP_094079070.1\|148705_150067_-\|phosphoglucosamine-mutase	gnl\|CDD\|100095	cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP016753.1\|WP_094079067.1\|144577_145603_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	3.31184e-28
NZ_CP016753.1\|WP_094079060.1\|131521_132067_-\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	2.36469e-100
NZ_CP016753.1\|WP_094079058.1\|128148_129327_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	1.81295e-168
NZ_CP016753.1\|WP_172826451.1\|151708_152392_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.20381e-84
NZ_CP016753.1\|WP_094079062.1\|136259_139706_-\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NZ_CP016753.1\|WP_094079059.1\|131265_131478_-\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	0.00297408
NZ_CP016753.1\|WP_094079066.1\|143244_144528_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.0834e-107
NZ_CP016753.1\|WP_172826452.1\|155891_157454_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|274111	TIGR02397, DNA_polymerase_III_subunit_gamma, DNA polymerase III, subunit gamma and tau. This model represents the well-conserved first ~ 365 amino acids of the translation of the dnaX gene. The full-length product of the dnaX gene in the model bacterium E. coli is the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the exterme thermophile Thermus thermophilis. [DNA metabolism, DNA replication, recombination, and repair].	1.55424e-139
NZ_CP016753.1\|WP_094079065.1\|141361_143032_+\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0
NZ_CP016753.1\|WP_094079071.1\|150104_151697_-\|HAMP-domain-containing-sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	2.43198e-57
NZ_CP016753.1\|WP_094079075.1\|155397_155850_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	7.5097e-46
NZ_CP016753.1\|WP_094079068.1\|147630_148065_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.20946e-86
NZ_CP016753.1\|WP_094079064.1\|140462_140972_-\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	5.53979e-52
NZ_CP016753.1\|WP_094079074.1\|153930_155373_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP016753.1\|WP_094079069.1\|148078_148477_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	2.33444e-76
NZ_CP016753.1\|WP_094079076.1\|157613_158255_-\|thiol-peroxidase	gnl\|CDD\|239312	cd03014, PRX_Atyp2cys, Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx). Tpx is a bacterial periplasmic peroxidase which differs from other PRXs in that it shows substrate specificity toward alkyl hydroperoxides over hydrogen peroxide. As with all other PRXs, the peroxidatic cysteine (N-terminal) of Tpx is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Tpx is able to resolve this intermediate by forming an intramolecular disulfide bond with a conserved C-terminal cysteine (the resolving cysteine), which can then be reduced by thioredoxin. This differs from the typical 2-cys PRX which resolves the oxidized cysteine by forming an intermolecular disulfide bond with the resolving cysteine from the other subunit of the homodimer. Atypical 2-cys PRX homodimers have a loop-based interface (A-type for alternate), in contrast with the B-type interface of typical 2-cys and 1-cys PRXs.	2.35516e-46

>NZ_CP016753.1|WP_094079067.1|144577_145603_-|acyltransferase-family-protein
MNNKDKDLFSKFDTLKFVAIIMVVFIHIVCGKLYEVESGELSYEWIISNVIDSFCRSCVPIFVMVSGFFLLGKDEKIIVFFKKRILKIIPKFLIYSIIFYLFTITFHNNSFENNLFFKKSFYINFVKQLLTGKIYYHLWYIYMIVSIYLITPILRKIVFWDKEKNFQNTKYLISVWIFFWVLMPFFNTFFKLKINTYEQVGEYVGYFLLGYLIGNKKIRIFKNKKISAVLFFLFNSMIIYFTYIFTKKDGKLFDYFYNYYSIFVFFISVIIFEFAVNFEKKKLKNENSSLKKFVKVGSAMTFDIYLIHPIFVYFCENYLKNRISYGKYIVISFCCIFFYRL
>NZ_CP016753.1|WP_094079066.1|143244_144528_-|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase
MTVSGVRKNYLALFWILTIVVYFIGLIIINRGLGFRNIGIFGVALIAYYVGNIYNIAVGRYRLRDMAVVCVVNFIFATVANFFKIFTFYEAIVLFGIIAMFQIVFRYIIIVGVVERQRIMFIGENDYTQDLLESIKNDEQYRFIEHYKNVQKKDYGYDILKICDLKKINIIVDFTENLLINPKIVDKLLKNKLKGLQYYNYLEFYEMYENKLPVSHLSPKWFLENTGFEIYHNNFNLKAKRILDIIFALLIGVCVIPIMIIAAIIIKLESKGPIFFIQERIGEGNKPFKIVKFRSMTTDAEKDGPKWATKNDNRVTKFGKFMRLTRVDELPQLWNVLKGEMSFVGPRPEREFFIKQLEKEIMYYNLRHTVKPGLTGWAQVMYPYGASVEDAYRKLQYDLYYIKNHDILFDMKILLKTITIVIFGKGR
>NZ_CP016753.1|WP_094079065.1|141361_143032_+|formate--tetrahydrofolate-ligase
MTDIEIAQKAKLKKISEIAQSIGLCEDDYEPYGKYKAKVSLDVLKRNANKKDGKLILMTAVTPTPPGEGKSTVTVGLTQALNKLGYKSIAALREPSLGPVFGMKGGAAGGGMSQVVPMEEINLHFTGDIHAIGAAHNLISACIDNHIHFGNELDIDVNNITFKRVVDMNDRNLRNIVIGLGPKVNGIPRENSFQITVASEIMAIFCLADSIIDLKNRIGEIVFAYNRKGEMLKVKQLNIQGAVAALLKDAIKPNLVQTLENTPVFIHGGPFANIAHGCNSLIATKMALKLSDYVVTEAGFAADLGAEKFLDIKARFGNLEPNVIVIVATVRALKHHGGDKDLKTENCETLAKGLENLEKHIESMQKYNIPVVVAINKFITDTDAEIKVIKDFCKKQNVEVALCEIWEKGGEGGKELVEKVMDAIKKNENSSKKYAPLYNLDLTIQEKIEKIAKEIYGADGVNFSAKAKKNIQKYLENGYDKLPICISKTQKSLSDNPNLLGRPKGFKITINEIRLSAGAGFLVAMAGEIIDMPGLPRKPAAELIDIDENGVISGLF
>NZ_CP016753.1|WP_094079064.1|140462_140972_-|50S-ribosomal-protein-L10
MPAQAKLDAVKKLTEKLKDAKAMVFVDYKGISVNEDTELRKNARESKVEYFVAKNRLVKIALKEVGIEADFDDLLEGTTSFAVGYEDGVAPSKLIYEFGNKLKDKLVIKGGMVDAERVDVKTVEALAKLPSREELLGQVAYGLLSPVRMLAVALTNVAEQKENGEPAAE
>NZ_CP016753.1|WP_094079063.1|140046_140415_-|50S-ribosomal-protein-L7/L12
MAFNKDQFIEDLKVMSVLELKEVVEAIEETFGVSAQPVAVAGGAAAGGAAEEKTEFDVILTSAGGAKLAVIKEVRAITGLGLKEAKALVEDGGKAVKEGASKEEAEEIKGKLEAAGATVELK
>NZ_CP016753.1|WP_094079062.1|136259_139706_-|DNA-directed-RNA-polymerase-subunit-beta
MDKLIERYSFGKIVDRGEMPHFLEFQINSYEDFLQTKLPPQKRENKGFESIFNEIFPIESSNGLLKLEYLWYEIHENDEPLNDELECKKRGKTYSGQLKVRLKLTNKRTGEIQETLVHFGDIPLMTDKATFIINGAERVVISQLHRSPGITFNKELNIQTGKDVFIGKIIPYKGTWLEFETDKNDVLNVKIDRRKKVLLPVFLKAVDFFESNEQIMDEFFEAKTIDLSEIYEKYKGNELDEILRLKLEGSFVREDVIDEETGEFIVESKELIDGVVIEKILDEKLQKLDIWEVKPEDRIIANAMLNDSTTTNDEAVIEVFRKLRPGDLVTVDSARSLVKQMFFNPQRYDLADVGRYKINKRLKINVPEDVIVLTKEDVLHTIEYVKNLVSGEGFTDDIDNLSNRRVRGVGELLSIQIKGGMLKMSKMVREKMTIQDITTLTPQSLLNTKPLNALILEFFGSGQLSQFMDQSNPLSELTHKRRISALGPGGLSRDRAGFEVRDVHNSHYGRICPIETPEGPNIGLIASLSTYGKVNKYGFIETPFVKIKNGKADFDDIEYLAADEEEGLFIAQADTPIDKDGNFLTDEVVCRYGDEIVHIDKSKVDILDVSPKQLVSVSAGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPYVGTGLERKVAVDSGAVITSQATGTVTYVDARKIVVTDEDGKEYSHRLLNFEKSNQSMCLHQKPITDLGAKVKKGDIIADGPSTAGGDLALGKNILLAFMPWEGYNFEDGILISERLRKDDVFTSIHIEQFDTEARTTKLGDEEITREIPNVSEEALKNLDENGIIRVGAHVVPDDILVGKVTPKGETEPPAEEKLLRAIFGEKAKDVRDTSLRLPHGVKGTVVDVLELTKENGDDLKAGVNKLIRIYIAEKRKIMVGDKMSGRHGNKGVISRVLPIEDMPHLEDGTPIDVCLNPLGVPSRMNIGQVLEVHLGLAIGDIDKYIATPVFDGASEDDVKNYLEEAGYSRTGKVKLIDGRTGQPFDNPVTVGRMYMLKLHHLVEDKMHARAIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASNILQEMLTVKSDDISGRTKTYEAIVKGEAMPEADAPESFRVLIKEFQSLGLDVALYDKDGQQIELDKNVDA
>NZ_CP016753.1|WP_094079061.1|132170_136190_-|DNA-directed-RNA-polymerase-subunit-beta'
MSIRDFDSIQIKLASPEKILEWSYGEITKAETINYRTLKPEMEGLFCERIFGPSKDYECACGKYKRMRYKGMVCEKCGVEVTTSKVRRERMGHIKLATPIAHIWYSKGTPNKMSLLLGISTKELESVLYFSRYIVTDPGETGLEKGQILTDREYKLYESQFKNEFTAKMGAEGVLALLEEIDLKELEQKLENEMDTEHSSQKRKKVIKRLKIVRDLILSGNRPEWMIMTVLPVIPADLRPMVQLDGGRFATSDLNDLYRRVINRNIRLKKLMSIKAPEIVIKNEKRMLQEAVDALIDNGRRGKPVVTQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMNQCGLPKKMALELYKPFLMRELVQRELASNVKIAKKMVEEEDENVWELIEEIIKNHPVLLNRAPTLHRLSIQAFEPILIEGKAIRLHPLVCSAFNADFDGDQMAVHLVLSQEAQMEAKLLMLATNNIIAPSSGKPIAVPSQDMVMGCYYMTKEKKGAKGEGKVFSNRNQLITAYQSGKVSVHALVKVRVEDKLLDTTPGRLMFNLILPKEVRNYGITFGKKELAKLIAELYKRYGFEKTSSLLDDIKAFGFHYGTLAGITVGIEDLKIPETKKEILENAEKGVAEVEKQYKAGEIINEERYRKTVSIWAEATEKVTKDMMNNLDEFNPVYMMANSGARGSIAQMRQLGGMRGLMADTQGRIIEMPIKANFREGLNILEFFMSSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNHDDCGCEHGIVVSDLMDAGEVIEKLSERIYGRTLAKDLIHNGEVIATRNTLINDELIKKIEELDIREVEIRTPLTCKLEKGVCRKCYGLDLSNHKEILKGEAVGVIAAQSIGEPGTQLTMRTFHTGGVATAASVQSDYKADVSGKVKFRGISTLVNEEGKEIVVSQNGRLIIGKHRYEIQSGSILHVKDGDAVKKGQVLVEFDPYQTPIITSEEGKVEFRDIYVRENIDVKYGVTEKVAIKPVESSDVNPRIIIYTKDNRRVEYAVPYGAYLMVNEGDIVKKGQIITKILKTGEGNKDITGGLPRVQELFEARNPKGKAILSEFAGRVVFSDKKKKGMRLILIEDPETGELIQEYTVPVGEHLVVTNEMLIEKGAKITDGPVSPHDILKIKGLVEAQQFILESVQQVYREQGVTVNDKHIEIIVKQMFQKVKIKEVGDSLFLEDELIEKKIIERENEKLISNGKNPATYEPVIQGITKAAVNTESFISAASFQETTKVLANAAVEGKIDKLEGMKENVIIGKRVPGGTGFKDYLHLDAKLKSDIASEKEENQEEMLDDNAQENGEISVEE
>NZ_CP016753.1|WP_094079060.1|131521_132067_-|guanylate-kinase
MKGKLIIVSGPSGSGKSTVTKLVKDKLNIPLSISATTRKPRNGEIDGKDYYFLTKEEFQKKIKNDEFYEFANVHGNYYGTLKKTVEENLEKGLNVILEIDVQGALIAKEKKKDAILVFFKTENLEVLENRLRNRKTDSDEVIELRLKNAKKELEYEKKYDYVIVNKEIEKACNDLINIINL
>NZ_CP016753.1|WP_094079059.1|131265_131478_-|DNA-directed-RNA-polymerase-subunit-omega
MKKEKITIDELLKKVPNKYELAIIAGKIAKAEFKKDKAKFEVMDDVFSDIMNDEVEVIYNDNKKKENEEI
>NZ_CP016753.1|WP_094079058.1|128148_129327_-|RNA-polymerase-sigma-factor-RpoD
MSENKNKLKNSLANFIKETRKQKVASYEEINAALPANYPPEKIEQLIKKLADDGVQIVDTQKEKNELLKVPKTMEEIEKMEISDFEDGNDEFVESEIDDTEVDKLLQADLIKMAESMDVDEPIKMYLREIGQIPLLSYEEEIEYAQKVLNGDEEAKQKLIESNLRLVVSIAKKHTNRGLKMLDLIQEGNMGLMKAVEKFEYEKGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETINKIKKESRIILQETGKEPTAEELSKKLELPVEKVKNILEMNQDPISLETPVGSEEDSELGDFVEDDKFANPYDATTRVLLKEQLDDVLKTLNEREEKVLRYRYGLDDGSQKTLEEVGKIFNVTRERIRQIEVKALRKLRHPSRRKKLEDYRS
>NZ_CP016753.1|WP_094079068.1|147630_148065_+|50S-ribosomal-protein-L13
MSKYTKMQKKEEVTRNWYEIDAEGKILGKVAAEIAVRLMGKHKPSYTPHVDGGDFVIVTNAEKIAVTGKKLLDKKYYRHSGYPGGLKVRNLQEMLEKQPTEVIRKAVERMLPKNKLGSQMIGRLKVFVGNEHVHSAQKPERIDL
>NZ_CP016753.1|WP_094079069.1|148078_148477_+|30S-ribosomal-protein-S9
MANKIQYLGTGRRKTSVARVRLIPGETGVTINGKDMREYFGGREILAKIVEQPLELTETLNKYGVKVNVNGGGNTGQAGAIRHGVSRALLLADAELRRALKEAGFLTRDSRMVERKKYGKKKARRSPQFSKR
>NZ_CP016753.1|WP_094079070.1|148705_150067_-|phosphoglucosamine-mutase
MARKYFGTDGMRGEANKDLTIDLVGNLGLALGYYLKKHRKKAGKPRIILGTDTRISGYMIRSALSAGLNSMGVHIDFVGVLPTPGVCYLTRKLKADAGIMISASHNPVKDNGIKIFSSNGYKLPDNVEEEIEALMEDREKLLKHQIAGDDLGRFKYVEDDMRIYLDFLASTVKTSFKGLKIVIDAANGAAYRVASKIYQKLGADIIVINNIPNGKNINVNCGSTHPELLQEVVKVYKADLGLAFDGDADRLIAVDHEGNVINGDLVIAIIARYFKKRGLLNDNKVVTTVLSNMGFEKYLDEQGIGLIRANVGDRYVLEKMKEYGLNIGGEQSGHILMLDYNTTGDGVLSSIQLVSAILESGKTLNELVKDIKLWPQDSKNIMVSKEKKATWETNKELMDFIREKQKEIAGKGRILVRASGTESLIRVMVEAEKQEIVDKYIKELAKKVEEVLG
>NZ_CP016753.1|WP_094079071.1|150104_151697_-|HAMP-domain-containing-sensor-histidine-kinase
MRNLKLEDRISLNYVLLFLVLILFSNVILVYSLQRQSKKNLVSLAQNKIEDINSFLDKVTVFSRKTNELTFDFNPQVMEGGKIIYLKPFNPGEEGYLYVLEMKRNNSSAIPINTIGGTDTEEASATNEEIVKMLEKFNLRENEANGKTIDLGSENKYFAFKVARNIKHYDFNIYVLKNISQENKIYKRLEYLVILFTIIGAVLTIIVSKIVSRRILKPIKSVIKTAKSITSEDLSQRIEVPKSEDELQTLTLIINEMLDRIEISFGNQKKFVSDASHELRTPLAIIKGYAEIIKKRRLTNEEIFEESIDSIINETDNMRNLIQKLLFLAKGEITKINTKFVEIDANEMVRQIYLDTKVSTKTHEIHLKEGENFKINGDETLLQQAIRAIIENATKYSEENTNIYIESEIRNGNGVISIRDEGVGISKEDTKRIFDRFYRVDLSRTKATGGTGLGLAIVKRIIEIHNGKIEIDSEMGKGTKISIVLPINEKEIIAKNEKFNKKDRTKEKSSSFFKFLKKRKVKNKIKQQKK
>NZ_CP016753.1|WP_172826451.1|151708_152392_-|response-regulator-transcription-factor
MMKEKILVVEDDPKISRLLEIELKFEGFDVFFAYDGKEGLNMAKYGSYDLILLDVMLPKMSGMEVCKRVRETSQVPIIMLTAKDEISDKVVGFDYGADDYMTKPFSNEELLARIKALLRRTKKAVDHKGLFEFEDLTINYSTYEIFRGYGKDLIQLSKREFELLDFLVLNKGIVLSRDKILEEVWGFDYIGNDNILDLYIKYLRDKIDRPYERRFIQTVRGIGFIFK
>NZ_CP016753.1|WP_094079073.1|152617_153886_-|U32-family-peptidase
MKKRKRVELLAPAGNMEKLKSAFHFGADACFIGGNAFNLRGMSSNFNNKELKQAIDYAHSLGKKVYVTLNIFAHNAEIEYMPRFIKKLEEYGADAAIVADLGVFQLVREYAPNLRIHVSTQANNTNWMSVKTWKEMGAKRVILAREMSLNEIKKIREKVPDVEIEVFIHGAMCMTYSGRCLLSNYFTGRDSNRGICAQDCRWNYKVIAEGHEETGAHDIIENEDGTFMFNAKDLCTIEFIDKIIEAGVDSLKIEGRMKSIYYNSTVVKQYKRALDSYYSGSYKFDEDWLKELKTISHRQYSNGFFLGPTTEKDQNYKTGLSYSQTYRLIANVLEKVDTNKYKIQIRNQVFATQELELVRPESEVVKFKVKNFFNTKKEKYEDHVNPNTIAIIETEVEMGPMDLLRIKLPEGKSDSDMDKENF
>NZ_CP016753.1|WP_094079074.1|153930_155373_-|replicative-DNA-helicase
MDIDDLNLTDEKVNGLPEKTYSIKAEEGLIGSIFLKPKIMSEILEIVNEEDFYKGSHKILFNEMKKAHESGKIIEVLVIIELLKKNNLLEEVGGEDTIYDFTEVVSTAANATTYARIIKEKSIQRQLIDVGEEIIKLSQNSYNSIEKIIDDAEKKIFEISKKKQHQEIIKVGELADKKLKLLDEYQNSTSELSGIPTGYSAFDQMTGGLHGSDLMILAARPAMGKTAFALNLAISVAKQNKHVLVYSLEMGNEQLFDRILSITAGIRLKSLKDNMLKSEEMYRMGEVFGEITEMPFYISDSASVNMMELKSTARRLKSEGKLDFLLIDYLQLISPQEGYRKSREQEISEISRSLKLLAKELNIPILTLSQLSRGVEQRNDKRPMLSDLRESGAIEQDADMVMFLYRDSYYKKNNFDDEEESESSNSDNNNNSEENEKGEEVELIIGKHRSGPIGTVKLSFEASYQRFLNIKSDKYLPPSE
>NZ_CP016753.1|WP_094079075.1|155397_155850_-|50S-ribosomal-protein-L9
MKIKVILTETIKGIGKKDEIIEVKDGYANNFLLNKNKAVLATPENINKLQKKNEKIEKNHARDVKEANELKNILAKKEVVLKVKAGENGKVFGSIGAKEIAEAIKEQLNIEIDKKKISSNTRVKDLGLHIVELKLHSEVKGSIKVKVEAK
>NZ_CP016753.1|WP_172826452.1|155891_157454_-|DNA-polymerase-III-subunit-gamma/tau
MNITLYRKYRPQNFDEIAGQEFVTRAIKNSLRENKLSHAYLFNGPRGVGKTTIARLIAKGVNCLNSEDVTDSPCGVCENCVEISKGISMDMVEIDAASNRGIDEIRELKEKINYRPVKGRKKIYIIDEVHMLTKEAFNALLKTLEEPPSHIIFILATTEIDKIPDTVISRCQRYDFLPIDKKDIIKLLKKVAFKEDIEIDEESLDLIYQKSEGSARDSFSIFEQVVSNYSGEAIDILKTQKALGVVPEILLREFLDLIFLANKEKLVDFIDKIWEDGVVIENFLKDFAYYLKEQFRKSKDIKVNFLLDTISSIYFTLNEFKYEEDKRLLGYVLIHELYKNNRVKVLEKKLENFENLDVDDEKNSYGNSKTFDSEEANETKKSFEKKEKVDDISKEKEEIVEEELESEENINISIFRKKIRRIMSELKNLNTAFSIYFQNANFLKVEKNMLYVEVENDFIKNKIMGEDKKEIEEVINKICKTNIEVKAVVLKNKVKSESQKFLDKMTDFFEGEILKRKNKE
>NZ_CP016753.1|WP_094079076.1|157613_158255_-|thiol-peroxidase
MKKIILNSLILLAIVSCGNKTKSKTEEVKGIDKKYLEYIDSLKSENDLKIRMGEEPITIVGKKLKVGDKITQVPLVVNAKLEEKNIFDDKNIKVLYTAPSLDTKVCSIQTKILNDEAQKNPDIKFYSVTEDTPFAQARFCTENDINGIKAISDFKYHQFGLQNGLFIKEKGLLTRALIILDKDNTVKYIEYVQDEKNEADIDKALAFLQKMKK

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Crispr_ID: NZ_CP016753_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016753_2

1309513-1310360

I-B

Consensus_repeat	Method
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	PILER-CR
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CRISPRCasFinder
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CRT

11 spacers

csx1,csx20

The CRISPR arrays of NZ_CP016753_2

>merge|NZ_CP016753|2|1309513-1310360|PILER-CR,CRISPRCasFinder,CRT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACCATTTCTATTTTTATTAAAAAACCATTCTTCACTAAAGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACAGAATTTAACAATGGGTATTCGTCTTCTCTTTTATCTGGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACACTTCAACGTCGTTGAAAATATCGTCTAGGCTTTCAGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACGATCATTCCGATTTATTATGTATCGCTGACGATCTGGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACAGTTGTATTGTAATAACTCTAGATTGATTTGGAAGTGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACCTAATTGATAGAATTATATATGTACTGAATGCTTTATTGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACATTCAGCCGCCTATCAATCAGCCGCCATCTTAGTAGGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACTCTTTACCCATCCCCAATACTGTTATTGTATTCATTGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACAAGGTAACGATAGATACAAAGCGATAGAAGTATATAACCAGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACTGTATTCGATATGTATAAATCTTCTTTTTATTATAGTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAACAATAAATTTTGTATCGGGTGTCATTGTGGCACTCAAGTTGAAATAATAATTCTATTAAAATAAAGATAAAAAA

>NZ_CP016753|2|2|1309513-1310287|PILER-CR
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CATTTCTATTTTTATTAAAAAACCATTCTTCACTAAA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AGAATTTAACAATGGGTATTCGTCTTCTCTTTTATCTG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	ACTTCAACGTCGTTGAAAATATCGTCTAGGCTTTCA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	GATCATTCCGATTTATTATGTATCGCTGACGATCTG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AGTTGTATTGTAATAACTCTAGATTGATTTGGAAGT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CTAATTGATAGAATTATATATGTACTGAATGCTTTATT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	ATTCAGCCGCCTATCAATCAGCCGCCATCTTAGTAG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	TCTTTACCCATCCCCAATACTGTTATTGTATTCATT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AAGGTAACGATAGATACAAAGCGATAGAAGTATATAACCA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	TGTATTCGATATGTATAAATCTTCTTTTTATTATA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC

>NZ_CP016753|2|2|1309513-1310360|CRISPRCasFinder
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CATTTCTATTTTTATTAAAAAACCATTCTTCACTAAA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AGAATTTAACAATGGGTATTCGTCTTCTCTTTTATCTG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	ACTTCAACGTCGTTGAAAATATCGTCTAGGCTTTCA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	GATCATTCCGATTTATTATGTATCGCTGACGATCTG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AGTTGTATTGTAATAACTCTAGATTGATTTGGAAGT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CTAATTGATAGAATTATATATGTACTGAATGCTTTATT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	ATTCAGCCGCCTATCAATCAGCCGCCATCTTAGTAG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	TCTTTACCCATCCCCAATACTGTTATTGTATTCATT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AAGGTAACGATAGATACAAAGCGATAGAAGTATATAACCA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	TGTATTCGATATGTATAAATCTTCTTTTTATTATA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AATAAATTTTGTATCGGGTGTCATTGTGGCACTCAA
GTTGAAATAATAATTCTATTAAAATAAAGATAAAAAA

>NZ_CP016753|2|2|1309513-1310287|CRT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CATTTCTATTTTTATTAAAAAACCATTCTTCACTAAA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AGAATTTAACAATGGGTATTCGTCTTCTCTTTTATCTG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	ACTTCAACGTCGTTGAAAATATCGTCTAGGCTTTCA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	GATCATTCCGATTTATTATGTATCGCTGACGATCTG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AGTTGTATTGTAATAACTCTAGATTGATTTGGAAGT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	CTAATTGATAGAATTATATATGTACTGAATGCTTTATT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	ATTCAGCCGCCTATCAATCAGCCGCCATCTTAGTAG
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	TCTTTACCCATCCCCAATACTGTTATTGTATTCATT
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	AAGGTAACGATAGATACAAAGCGATAGAAGTATATAACCA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC	TGTATTCGATATGTATAAATCTTCTTTTTATTATA
GTTAAAGTAGTTTATCCATTAAAACAAGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016753.1\|WP_094080041.1\|1311618_1312623_+\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|226124
NZ_CP016753.1\|WP_094080033.1\|1302884_1303457_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080036.1\|1305543_1305762_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080794.1\|1315325_1315712_+\|hypothetical-protein	csx20	cls000023_csx20_CAS-I:CAS-III	unknown
NZ_CP016753.1\|WP_094080047.1\|1320772_1322371_+\|DUF3029-family-protein	unknown	unknown	gnl\|CDD\|379284
NZ_CP016753.1\|WP_094080045.1\|1318001_1320134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080032.1\|1302219_1302858_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080043.1\|1313106_1315221_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863
NZ_CP016753.1\|WP_094080046.1\|1320321_1320783_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|379137
NZ_CP016753.1\|WP_094080040.1\|1310601_1311294_+\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|226124
NZ_CP016753.1\|WP_094080039.1\|1308413_1309220_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP016753.1\|WP_094080038.1\|1307095_1308355_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP016753.1\|WP_094080031.1\|1299784_1301248_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP016753.1\|WP_094080793.1\|1301373_1302120_+\|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|235473
NZ_CP016753.1\|WP_094080042.1\|1312736_1312937_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080035.1\|1304047_1305496_+\|alpha-amylase	unknown	unknown	gnl\|CDD\|236518
NZ_CP016753.1\|WP_094080048.1\|1322533_1323646_+\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|226124
NZ_CP016753.1\|WP_094080044.1\|1315757_1317890_+\|hypothetical-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
NZ_CP016753.1\|WP_094080034.1\|1303453_1304038_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080037.1\|1305806_1306949_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460

Protein	Function_ID	Function_description	E-value
NZ_CP016753.1\|WP_094080041.1\|1311618_1312623_+\|50S-ribosome-binding-GTPase	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	2.99293e-62
NZ_CP016753.1\|WP_094080048.1\|1322533_1323646_+\|50S-ribosome-binding-GTPase	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	4.52427e-66
NZ_CP016753.1\|WP_094080047.1\|1320772_1322371_+\|DUF3029-family-protein	gnl\|CDD\|379284	pfam13597, NRDD, Anaerobic ribonucleoside-triphosphate reductase.	2.49545e-143
NZ_CP016753.1\|WP_094080043.1\|1313106_1315221_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	8.10078e-26
NZ_CP016753.1\|WP_094080046.1\|1320321_1320783_+\|radical-SAM-protein	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	9.45301e-28
NZ_CP016753.1\|WP_094080040.1\|1310601_1311294_+\|50S-ribosome-binding-GTPase	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	1.41987e-45
NZ_CP016753.1\|WP_094080044.1\|1315757_1317890_+\|hypothetical-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	1.744e-09
NZ_CP016753.1\|WP_094080038.1\|1307095_1308355_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP016753.1\|WP_094080031.1\|1299784_1301248_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	7.21132e-64
NZ_CP016753.1\|WP_094080793.1\|1301373_1302120_+\|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl\|CDD\|235473	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.	7.5636e-125
NZ_CP016753.1\|WP_094080035.1\|1304047_1305496_+\|alpha-amylase	gnl\|CDD\|236518	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed.	0
NZ_CP016753.1\|WP_094080039.1\|1308413_1309220_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.06701e-115
NZ_CP016753.1\|WP_094080037.1\|1305806_1306949_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0

>NZ_CP016753.1|WP_094080039.1|1308413_1309220_+|pyrroline-5-carboxylate-reductase
MKIGFIGTGNMGSSIIKGILSSKFEKSENINIFDLDKEKVNNLVKEYGVNAVNSEKELAENCDIIILSVKPHIIPIVLKNLSGNVKKDTIILTIAAGISISMIENALGEDKKVVRTMPNTPAQVLSGMTAVTFNKNIENSEKEIIFKLLNSFGKSVEIEEKLMHAYTGISGSLPAYVYMFMEALADGGVLCGMPRNKAYEIVAQTVAGSAKMLLETGKHPGQLKDEVCSPSGTTIEVVRVLENGNFRGNVIEAVVACTEKSKEMAGEK
>NZ_CP016753.1|WP_094080038.1|1307095_1308355_+|glutamate-5-semialdehyde-dehydrogenase
MNKYIEEMGKKAKIASQKLLTLDTKIKNNALRAIADEIIEKKEEIKAANKIDLENGKKAGLSFALLDRMELTDARIEGMAQSLREIAAFNDPIGEILTGWNHKNGMSIAKKRVPLGVIGMIYESRPNVTIDAAGLCLKSSNAVILRGSENAINSNIYLSRLFSEVGKKVGIPENSVQLIEKPERELVKEMITLNEYIDVLIPRGGKGLKKFMIENATIPVIETGAGVCHVFVDESADIEMALPIIENAKTQRPSTCNSIETVLVHKNIASEILPELTDMMIKDKVELRYSKEALEIVGNRSDVKLAQDEDFGTEYLDMVMSLKLVDNVEEAICYINEHGTHHSDSIITKNIQNAEKFLNEVDSAAVYLNASTRFSDGGEFGFGGEIGISTQKLHARGPMGVRELTTTKYVIRGNGQIRE
>NZ_CP016753.1|WP_094080037.1|1305806_1306949_+|glutamate-5-kinase
MKKQNKREEILEDIQRIVIKVGTSTLTDENGQLDLQKMKKIVVEISNLQDKGFDVILVSSGAVGAGMGLLEIEERPKLLSEKQMLSAVGQVTLMQVYQTFFKKYDKLIGQLLLTKGEFSNRKRYLNVRNVCNAFLDKKIIPIINENDAIVSDELKVGDNDTMSALVSGLIDADLLIILSDIDGLYNKNPKKYEDANLIEVVGDINEDVKNMAGGKGSKFGTGGMITKIMAAEMATKIGTNLVIVNGDDPRNISRVVEKENIGTLFVRKNKKISSKKYWLAYGTNKKGEVVVDEGAEKALLSGKSLLPIGIKSVFETFDRGGVLEIKNSKNKVIANGISNYSSDEIELIKGQKSEDIEKILGHKYDDVVIHADNIVLIENV
>NZ_CP016753.1|WP_094080036.1|1305543_1305762_+|hypothetical-protein
MKKIKLALILSVLVGALNSCTAVALGAGAVAGGYTCTKTNICKDLINKKNNTKNIQSTQPNTEPSSINESGL
>NZ_CP016753.1|WP_094080035.1|1304047_1305496_+|alpha-amylase
MLNGVMIQYFEWNLADDGKHWERLKNDAAHLKEIGVSAVWIPPAYKGTFSGDVGYSAYDLWDLGEFNQKGTVRTKYGTKEELIDAINELHKYGINVYLDAVLNHKGGADETERFLAIEVDPENRNEEISEPKEIEGWTKFTFPGRNKKYSEFEWNHALFSGVDYDNLTGKTAIYKIAGENKGWAENVDSELGNYDYLMNADVDYSHPEVRNEIINWGKWVVNELNLDGFRMDAVKHISEDFIKEFLIEVRKVYGEKFYSVGEYWKGDLDTLKTYLENIGYETDLFDVGLHFNFHEASVEKENYDLTTILDNSIMLMDPIKAVTFVDNHDSQKGSALESEIESWFIPHAYAIILLSEKGYPCLFYGDYYGVGDNKSPHGWVIDKLLYVRRNNAYGEQINYFDDPNIIAFYRKGRENEINTGCVAILSNNEDGEKAIEIGKDRIGQVWEEVTGSGFEDVAIDEEGNAAFRVEGQKIAVWVPKKQ
>NZ_CP016753.1|WP_094080034.1|1303453_1304038_+|hypothetical-protein
MKKLILFLIIFTSFIVFPEQKDKNSEIYEKRKYSTVLKIENDDYDRAVGIRTSNRRDLKGVMTVIMGGSFSVDNDVASIYNQISKNANKVTLIYFDDKDTPTIKRVIDTLKKKKFSGKVEVISFLNKESKILKNSFAKKDWSYSNYYNLDDISELVSYDGEKKTKSEVIKIFLEKIKKSLENNEDDINKFYETN
>NZ_CP016753.1|WP_094080033.1|1302884_1303457_+|hypothetical-protein
MKKAFLLILSAICLNSCHALVIRPLTEATVAVIGAPFYAVGKLLPKKDEQDYGKYREGYRAYKVEEYKDRIDKLMSDILQREWEKTTFFSGFVDTDYHTEQILLPKGLVVEKDVLVDKETGYGLPVHFLKDEYPCYFDRKKGIYDLKSKEEYFIKGNRRDYFRIESETEKGNLLEKMILEKNNVQRGCKQ
>NZ_CP016753.1|WP_094080032.1|1302219_1302858_+|hypothetical-protein
MKKRILFLIFSVLFLNSCAATAVATGLLMTYELGCNEGEMKTCDSDDSVVKRVAKGLTWPVIEPIKSISDGIEDYQPKRKNRYMAYSNKSHKESVSRVTLRVIDREMATQTVNILGKNIQISVPKNVELKVIDNDIEMIDAQSGYGLPIKFFTVSNPCNNQEEWKNKEYKDKYLKKISKDEYFYLKSYTYDGKELEDKIVKANNMEKICENN
>NZ_CP016753.1|WP_094080793.1|1301373_1302120_+|3-deoxy-manno-octulosonate-cytidylyltransferase
MKILGVIPARFFSTRFEGKPLKDINGNPMIEWVYKRAKNANIDELIVATDDKRIFEAVKKFGGKVVMTSSDHKNGTSRIIEVINKEKYKDFDFVINIQGDEPLIDIKSINILADNYRSQNSEIITLKQEIIEESDILNPNVVKVITDFYDNAIYFSRLPIPFEREKIQNFKYYRHIGIYGYTTKFLNELSNLRDGILQRMESLEQLKFMENGYKIKVLETDSKVIGVDTKEDLEEVIKFICKNGIILE
>NZ_CP016753.1|WP_094080031.1|1299784_1301248_+|D-alanyl-D-alanine-carboxypeptidase
MFSKTKKILILTVFFAVLLYGEGEGTSEKQDSGSSKSEAVKVVKSGSDEIEQATNRGNSAHKYSKKSSKHNKKHKNKSEWNSKNSKNTSSKASDTLNSKGKNSKSQTDSLTKSKKNVKIVKAVEKEKEGESKYNGKVIKFIATTDGKVIKNEDAKQKHPIASLTKVMNIMVALDQVDKGKVKLSDKVCFTPDVVDTGGSWLNAKAGDCFTLRDLLRAEIIYSANNAAYMVASYIGKGNLDNYVKLMNEKAKEFGMKDTQYFTPAGLPTSMTKKQMDISTAYDMYLLGRQAIKDERLREWMSEKELELLNEKGEEVVYNNRNHLLGQFGVFGLKTGFHEQAGYNMIVSSKIGNLEIISVSLGNKSDVERTEEQKKEFQAIEKNLVPIYKAGQVVANKFKIKDAVKKEITGILAENVYQLGNTDYKFEVKDLRVTAEKDGILKGDVIGKLQVLSNDNKIVNTIDIVASNDYKRLSLLGKVLRFVTFGMA
>NZ_CP016753.1|WP_094080040.1|1310601_1311294_+|50S-ribosome-binding-GTPase
MTSFKYYRKNDIEKKLEKARFRPLDVMVTGVTGAGKSTTLNTIFKKNVATVGNGVDPETMDLDSYSLNDVFRLWDTPGLGDGVANDEIHKRKLVDLLYKTYSLDGNIYGWIDSAIVVLEGLNRDMGSTYTLLNEVIVPNIQADRILVVINQADMAMKGRHWNKETNRPDEVLVDFLEKQALSIQNRVKETTGVTIRKPVYYSAEYGYNIEKLLDFIIDNMIVERRPLVRA
>NZ_CP016753.1|WP_094080041.1|1311618_1312623_+|50S-ribosome-binding-GTPase
MARNIFKEIERRVMNEQMDETTRQKLLGNLLRMKEQKINLMITGATGVGKSSTINALFGEEVAKVGTSVNPETMGIDKYELDNLVIWDTPGLGDGREADNRHSKIIIDKLYEKDRNGNLLIDLVLVILDGSSRDLGTSYELINSVIIPNLGENKKNRILVAINQADVAMKGKYWNAQENQPERKLQDFLEDKVASVRRRIKEATGIDVEPIYYSAGDKEEGYMQQKPYNLSKLLYYILQHTPEEKRLVYAQNINKEEAMWKDNDDLQDYRAGVLEKFVESVTRGMAIGGTIGQAIGSLVGLGSVGRVIGTVGGAIVGVGANIISGVVDFFEGIF
>NZ_CP016753.1|WP_094080042.1|1312736_1312937_+|hypothetical-protein
MTGIEETVGTVLLVTAGVVAVAEGVNETAKLLNETVNTADEMFTTMGNMAEDFCNEVSNFFDSFCW
>NZ_CP016753.1|WP_094080043.1|1313106_1315221_+|TIGR02221-family-CRISPR-associated-protein
MAKILIAGLGKGMIDRNSEERDYRKADYKIKIEETGEYKIYRDEYFVTSVLEKHYDIDKTIYIGTAGSMWDKLYTHYCKKNGFSTESEEYEKYRDELRNVTKNANKNTDVLNINSEKFNSIFENTEKKVQIIVTKYGMNKNEIFENFNKIIEIVNSLNKEDEIYLDITHSFRSNAMWIFLVMNYITEVIDKNIRIKMITYGMLEEMDDDETEKDLNGNPLKVAPIINLKSFFDLMKWIKGANAFKQYGNTYEFLDMIEDNKLKNTLEEFSNSMNMNYIGNIKENIGKINQMEKTIKTLDGPAKLLLPDILERFAQNFGEKQETFEILLGLAEWHYNQKRYSMSYVNIIEAIYTFTGKILEVEDINKGKEVLREWINRITEENKIKYKDLSEKEINNRIKLSEIFESSRVIRNNISHTLESRAEMQEIISKIPENIQKLREIFKTEYKKGEIHKSQDLKMQQTYTFLEKLAENGQFAEIGRVASNGIYDFLFEELGVQKSGENKNVVKNWLDNKRGNFEKELEKGQLSELMKLFLEVKNNSRSITRKEIIKKIRHLQNILTKKSFLEAIENVNLNDKRSSQTQQVPKINVNKEDRKILVFKEIFGEQEKKEVIKKYKIKRISKLSSEIAKEWQNLENDSNKEKNIKRFKDIIDRNIDSGDILLIEGEVGITFELVNWAKEKGIIAIYGVEKVTDNFLLKVEFYEY
>NZ_CP016753.1|WP_094080794.1|1315325_1315712_+|hypothetical-protein
MMERKALLLFSHQLTENQEKELVENFKVKKIISLSSELQKMWSNVSIKENYKENLEKIKKYIEENFNENDVMLVQGNWGYTYNIVKWSIEKKLVPVYSYTERNVEEIKDGENVKKISYFKHVKFIEYE
>NZ_CP016753.1|WP_094080044.1|1315757_1317890_+|hypothetical-protein
MENNILIMSLSNNLEKNIEKAKKNKKEYRWENKKYDLEKYEYLTKVYLEELKPNKIIVFGTDQSSWNYLYNLLNEYFYSEKEDVVFLEEQKNDVEYIRKVFKERFPDKCKIFFIESKNKFDNENIVSDLVFQIEEIKNILDEQSRSKVYVDITGGLRIMYMSLVSIINILKMYYSQLNLKVLYSQNDINTDYFQIIDITNVLEKLDFVDAVSSFTKYGSIAKLRDIIQNEALLNKLEELYIKLQFNLKNIDDTYKTLTEIKGKNENEKILKERVKKLKTLKNEKYHNKVKNYGLEIVNKYESDNIKYKNLKDKRNKIVHPLNKLGEYITNITNNKNLHKKRILIWNLGSGESGKGYKEVLYSYSDNEKSADIITRYTFESYLEDYNQIYIFGLETGKWDILTEDFKNKGIMLPNDKIKYVQIDNFGDIDELNLKIENEIKIKKQEIIEIDMDITHSFRNIPFNLLTSLRLFELLNDNIVLRSIYYGERILNSEYGSIYKIPILEIINLYKSIVEFKDYTKYTNFLENTKMIDEKLLKIMRKISEAYTYNEYRKIIEISKEFEKVNNKELDLINKKIYEIIEVKLIKNETYEELMKFVKNQKNSKNYALASFFLIDIYKYKIFKIDSKEKSETFYKKIEKLKNKYVDNKLKKLIDCLNKLNNIRNYAGHINIREEVNLINFSDSLEKAIKIMNKLTLKDIEKYEKEYEAIE
>NZ_CP016753.1|WP_094080045.1|1318001_1320134_+|hypothetical-protein
MEKNKISRIELAREIRKLFVKNRNIQEYSKIDDNFLVDYYFNRYDERNNKSGMKIDENNFNLKIFEEDFKNHLLNEKKLLEEDGVDTSEITKIVSAFSHSYSENSILEELPFEKDLRIFPNIKTLYLLYTDQTESKFLEYKEASKYRDKIKIEGILIENSIEMLYKEIVKLIQDGKISKNNTVLDTTLGFKEIGIVFYRISVEKQIKSINWRETMLPNYKPAADNKNEFVKGKGQGPRMSLVTKLNLMKEPLEESNRIYRKINENILKVNCKAVSDLYEVVGIDDLRFFYEEIGKLFNFFKMLEYSEDIENFYSDLNEALKKIFKYKFLSENISRLREYVKYLARVIYRVESDYIDIKWLKFSNNIFGITENEIKKEKDEKIERNVEDKELDDDEIKRIKEKKTEWENIDFYSDEDDEGKDALELEKSIEMVDYFLYLLLKQAIFEKISNYHLKSILEEYYKEEMIQEIIGVRDSVDISEDEKIKLIKNILFEELTEEYELEEFEIPDLADKNVGLLKYKGGILDIPFEDEGKLEILKINFKEEYFIRKRDKRQEFDISKVENRIKLNKKIEIKMKLEEILDKNNKDEINFPFKISEKSDIVEIQNGKIVTKSDRKTKVKNIFFNNSDSIINVPIVELFKNIEKNKFEISKKDLEYKFGIKDQKVTKLKDIIFGINQIIRRKIEEKYPKKDDVEDFIIYENGLKINLKYR
>NZ_CP016753.1|WP_094080046.1|1320321_1320783_+|radical-SAM-protein
MKVKIASIKKNRYEDGPGIRTTIFFQGCNVKCRGCHNERIQDIRYGKEYEVRDLCEEILSYNLPVKKITISGGEPMMQKEALEEFIDEMHKKNFEIALYTSYDLEEVPKNILEKLKYLKVGKYIDTLRIQEKFYGSSNQKFYSLEKGEIVNES
>NZ_CP016753.1|WP_094080047.1|1320772_1322371_+|DUF3029-family-protein
MRVNQANANTNAAYRILKNEEFKNQLHEERWIHIHDKEYTGVSYNCIGIELREKLNQLKENLEEMEIDDALDCIFQVIVNLTNDQSGGIGFINIDSDLAEFVQEVSEEKLITKIRRLYQKLNLPLRNGYEKAYVSFNLGLDTSENGRKVTRCFLKAFEYGEILNGLPFVFPNIIFKLKKGINFDSDDKNYDLFSLATKVTGKRMNPTYFNCDSVLVKDINEKKVGIMGCRTLVAKNVNGEEGALKRGNIASISINLPKIARESTNLNNFYKKLSEICEESKDILIQKYKALCKLEIDNFRYILENNFYENSEEAINNNDMEKSFKNGTLSIGFIGLAECVSYLVKKEISLDMIENNLELSREILRFMRKMTDKWTKKYNLNFSVLATPGEGISGRFCEDEETKEFYTNSFHIPVYLELDAFKKLELESNFVEYCNGGSISYIEFSTPVLNNSEAIMDVVKFGISKGINYLGINFPLDYCESCKTTGIFEEKCSCCGSIEIKKLRRVSGYLSYKETLKGGKKAEEKVRKSHLK
>NZ_CP016753.1|WP_094080048.1|1322533_1323646_+|50S-ribosome-binding-GTPase
MKRDLLKEFESIIMKQKLNENVKQKLLGNLLRLKKQKVNLMVTGATGCGKSSTINALFGVEVAKVGTSVDPETMDIERYELDNLVVWDTPGLGDGKEADNRHSKRMIDKLYEKDENGNLLIDLVLVILDGGSRDLGTSYELINNVIIPNLGKNKENRILVAINQADVAMKGKYWNEEENRPEDELEEFLDRKVESVKKRIKEATRIEVEPIYYSAGYKEEGYLQQKPYNLSKLLYYILQNTPEEKRVVYVQNLNQEEVMWKDNDDLKDYRKGILESILGAAVGVLAEGVANVVNGVANVVEGASDGISEGSDTGSDVGGAIGSIFGEVGETIGSAVGSVVGGVVGGVVGAVSSAVSSVCDTIGSFFSGWF

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Crispr_ID: NZ_CP016753_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016753_3

1326856-1326965

I-B

Consensus_repeat	Method
GTTAAAGAAGTGAATCCATTAAAACAAGGATTGAAA	CRISPRCasFinder

1 spacers

cas4,cas2,cas1,csx1,csx20,cas10,csx10gr5,csm3gr7,cas6

The CRISPR arrays of NZ_CP016753_3

>merge|NZ_CP016753|3|1326856-1326965|CRISPRCasFinder
GTTAAAGAAGTGAATCCATTAAAACAAGGATTGAAACTTGATTGTCCGTTAAACGAATCTGGATTTTCCCATATGTTAAAGTAGTGAATCCATTAAAACAAGGATTGAAA

>NZ_CP016753|3|3|1326856-1326965|CRISPRCasFinder
GTTAAAGAAGTGAATCCATTAAAACAAGGATTGAAA	CTTGATTGTCCGTTAAACGAATCTGGATTTTCCCATAT
GTTAAAGTAGTGAATCCATTAAAACAAGGATTGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016753.1\|WP_094080059.1\|1334637_1336752_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NZ_CP016753.1\|WP_094080057.1\|1333320_1334226_+\|hypothetical-protein	csm3gr7	COG1337_csm3gr7_CAS-III-D	gnl\|CDD\|377130
NZ_CP016753.1\|WP_094080794.1\|1315325_1315712_+\|hypothetical-protein	csx20	cls000023_csx20_CAS-I:CAS-III	unknown
NZ_CP016753.1\|WP_094080047.1\|1320772_1322371_+\|DUF3029-family-protein	unknown	unknown	gnl\|CDD\|379284
NZ_CP016753.1\|WP_094080050.1\|1324546_1325518_+\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NZ_CP016753.1\|WP_094080045.1\|1318001_1320134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_157697362.1\|1330088_1331912_+\|hypothetical-protein	csx10gr5	cd09700_csx10gr5_CAS-III-D	gnl\|CDD\|377130
NZ_CP016753.1\|WP_094080046.1\|1320321_1320783_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|379137
NZ_CP016753.1\|WP_094080051.1\|1325577_1325868_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP016753.1\|WP_094080044.1\|1315757_1317890_+\|hypothetical-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
NZ_CP016753.1\|WP_094080049.1\|1323792_1324407_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NZ_CP016753.1\|WP_157697361.1\|1328131_1330099_+\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|274208
NZ_CP016753.1\|WP_094080061.1\|1337695_1338085_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080058.1\|1334225_1334657_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080055.1\|1331935_1332229_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080048.1\|1322533_1323646_+\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|226124
NZ_CP016753.1\|WP_094080052.1\|1325883_1326531_+\|Dna2/Cas4-domain-containing-protein	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP016753.1\|WP_094080060.1\|1336772_1337423_+\|hypothetical-protein	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NZ_CP016753.1\|WP_094080056.1\|1332479_1333310_+\|hypothetical-protein	csm3gr7	cd09683_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187814
NZ_CP016753.1\|WP_094080053.1\|1327301_1328054_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP016753.1\|WP_157697361.1\|1328131_1330099_+\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	2.4e-65	215.8	8.7
NZ_CP016753.1\|WP_094080056.1\|1332479_1333310_+\|hypothetical-protein	csm3gr7	cd09683_csm3gr7_CAS-III-A:CAS-III-D	6.1e-27	89.2	0.2
NZ_CP016753.1\|WP_094080794.1\|1315325_1315712_+\|hypothetical-protein	csx20	cls000023_csx20_CAS-I:CAS-III	4.8e-49	160.6	4.2
NZ_CP016753.1\|WP_094080057.1\|1333320_1334226_+\|hypothetical-protein	csm3gr7	COG1337_csm3gr7_CAS-III-D	6.9e-21	69.5	5.8
NZ_CP016753.1\|WP_157697362.1\|1330088_1331912_+\|hypothetical-protein	csx10gr5	cd09700_csx10gr5_CAS-III-D	7.9e-26	86.0	0.3
NZ_CP016753.1\|WP_094080059.1\|1334637_1336752_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	3e-95	315.2	28.6
NZ_CP016753.1\|WP_094080050.1\|1324546_1325518_+\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	1.8e-80	265.0	1.1
NZ_CP016753.1\|WP_094080052.1\|1325883_1326531_+\|Dna2/Cas4-domain-containing-protein	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	3.3e-19	64.5	11.4
NZ_CP016753.1\|WP_094080060.1\|1336772_1337423_+\|hypothetical-protein	cas6	cls000004_cas6_CAS-I:CAS-III	1.2e-64	212.5	10.8
NZ_CP016753.1\|WP_094080051.1\|1325577_1325868_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	1.3e-22	74.7	0.6
NZ_CP016753.1\|WP_094080044.1\|1315757_1317890_+\|hypothetical-protein	csx1	cd09732_csx1_CAS-III	2.8e-23	77.6	37.3

Protein	Function_ID	Function_description	E-value
NZ_CP016753.1\|WP_094080059.1\|1334637_1336752_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	3.54547e-84
NZ_CP016753.1\|WP_094080057.1\|1333320_1334226_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	4.06075e-12
NZ_CP016753.1\|WP_094080047.1\|1320772_1322371_+\|DUF3029-family-protein	gnl\|CDD\|379284	pfam13597, NRDD, Anaerobic ribonucleoside-triphosphate reductase.	2.49545e-143
NZ_CP016753.1\|WP_094080050.1\|1324546_1325518_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	4.98796e-85
NZ_CP016753.1\|WP_157697362.1\|1330088_1331912_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	2.60512e-12
NZ_CP016753.1\|WP_094080046.1\|1320321_1320783_+\|radical-SAM-protein	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	9.45301e-28
NZ_CP016753.1\|WP_094080051.1\|1325577_1325868_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.31087e-17
NZ_CP016753.1\|WP_094080044.1\|1315757_1317890_+\|hypothetical-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	1.744e-09
NZ_CP016753.1\|WP_094080049.1\|1323792_1324407_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	9.60848e-10
NZ_CP016753.1\|WP_157697361.1\|1328131_1330099_+\|hypothetical-protein	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	4.76669e-10
NZ_CP016753.1\|WP_094080048.1\|1322533_1323646_+\|50S-ribosome-binding-GTPase	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	4.52427e-66
NZ_CP016753.1\|WP_094080052.1\|1325883_1326531_+\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	1.5061e-12
NZ_CP016753.1\|WP_094080060.1\|1336772_1337423_+\|hypothetical-protein	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	1.67418e-30
NZ_CP016753.1\|WP_094080056.1\|1332479_1333310_+\|hypothetical-protein	gnl\|CDD\|187814	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.01412e-21

>NZ_CP016753.1|WP_094080052.1|1325883_1326531_+|Dna2/Cas4-domain-containing-protein
MEVIKSQKISIFEVLDYIFCPRIIYYENVLKMFGEKKEDSNKEEEERVKGKNRINRKWIWDRLKLKKQSIEKMMNSNQENILYWYNREFNKELSSERYHFYGKLDDILLLEDETIVPVYYYNAKYTAREENRYKYIVAMFLILIEEEYKIKSQKGYILFLDGLSLKKIECTNKDLEKVKESAAEVLKIIETERYPIEAEGGTKCRDCYYKKICGR
>NZ_CP016753.1|WP_094080051.1|1325577_1325868_+|CRISPR-associated-endonuclease-Cas2
MMTWLIYDITDDRNRREIIRIAQKHGLYRVQKSVFLGNIEKDEVDEIIVETKKAIDLREDSVYIFPVCEADYKKATLLGLSFEQDIVKDEKPVLFF
>NZ_CP016753.1|WP_094080050.1|1324546_1325518_+|CRISPR-associated-endonuclease-Cas1
MELYITDLGTVVKKRDDLFEITTSEKKVAVAPQKIKSLVLSKGIFLTTDVIKLAVDNNIDIVIVDDFGNPYGRFWQSKFGSTANIRRKQLEIFGTQKGIELAKQILIQKIKNCTEHLEDLKIKREAKKAFLDKQIKEMKRYIYQIKLVEGNVSEKRGTLMGYEGNAAKIYYQTLSELIPEGFKFEKRSMHPAEDEFNAMLNYAFGILYSKVEKACIIAGLDPYVGIIHTDNYGKKSLVFDLIESYRHLASRTVFSLFTQKRVQKYFFKREGNSVMLVGDGKKVLVESFYNRLEKKVRYNNRNISSLDKLQFECHELANFLISK
>NZ_CP016753.1|WP_094080049.1|1323792_1324407_+|EcsC-family-protein
MLEREMMNLLDVCYDKALQGVLPVEKSIEELAEDYLAKTNSREKAIDKLIGYQTVLCGTNGFITGLGGLLVLPVAISANVAGVIYVQLRMIAAIAHINGYDIYSDQVRTIAYACLTGSSAANILKNVGIKISEKMAVNALKKVPGAILIKINQQVGFRLVTKFGQKGLVNVIKMMPLVGGVVGGVFDTGMTLTIGNIAKKVFSE
>NZ_CP016753.1|WP_094080048.1|1322533_1323646_+|50S-ribosome-binding-GTPase
MKRDLLKEFESIIMKQKLNENVKQKLLGNLLRLKKQKVNLMVTGATGCGKSSTINALFGVEVAKVGTSVDPETMDIERYELDNLVVWDTPGLGDGKEADNRHSKRMIDKLYEKDENGNLLIDLVLVILDGGSRDLGTSYELINNVIIPNLGKNKENRILVAINQADVAMKGKYWNEEENRPEDELEEFLDRKVESVKKRIKEATRIEVEPIYYSAGYKEEGYLQQKPYNLSKLLYYILQNTPEEKRVVYVQNLNQEEVMWKDNDDLKDYRKGILESILGAAVGVLAEGVANVVNGVANVVEGASDGISEGSDTGSDVGGAIGSIFGEVGETIGSAVGSVVGGVVGGVVGAVSSAVSSVCDTIGSFFSGWF
>NZ_CP016753.1|WP_094080047.1|1320772_1322371_+|DUF3029-family-protein
MRVNQANANTNAAYRILKNEEFKNQLHEERWIHIHDKEYTGVSYNCIGIELREKLNQLKENLEEMEIDDALDCIFQVIVNLTNDQSGGIGFINIDSDLAEFVQEVSEEKLITKIRRLYQKLNLPLRNGYEKAYVSFNLGLDTSENGRKVTRCFLKAFEYGEILNGLPFVFPNIIFKLKKGINFDSDDKNYDLFSLATKVTGKRMNPTYFNCDSVLVKDINEKKVGIMGCRTLVAKNVNGEEGALKRGNIASISINLPKIARESTNLNNFYKKLSEICEESKDILIQKYKALCKLEIDNFRYILENNFYENSEEAINNNDMEKSFKNGTLSIGFIGLAECVSYLVKKEISLDMIENNLELSREILRFMRKMTDKWTKKYNLNFSVLATPGEGISGRFCEDEETKEFYTNSFHIPVYLELDAFKKLELESNFVEYCNGGSISYIEFSTPVLNNSEAIMDVVKFGISKGINYLGINFPLDYCESCKTTGIFEEKCSCCGSIEIKKLRRVSGYLSYKETLKGGKKAEEKVRKSHLK
>NZ_CP016753.1|WP_094080046.1|1320321_1320783_+|radical-SAM-protein
MKVKIASIKKNRYEDGPGIRTTIFFQGCNVKCRGCHNERIQDIRYGKEYEVRDLCEEILSYNLPVKKITISGGEPMMQKEALEEFIDEMHKKNFEIALYTSYDLEEVPKNILEKLKYLKVGKYIDTLRIQEKFYGSSNQKFYSLEKGEIVNES
>NZ_CP016753.1|WP_094080045.1|1318001_1320134_+|hypothetical-protein
MEKNKISRIELAREIRKLFVKNRNIQEYSKIDDNFLVDYYFNRYDERNNKSGMKIDENNFNLKIFEEDFKNHLLNEKKLLEEDGVDTSEITKIVSAFSHSYSENSILEELPFEKDLRIFPNIKTLYLLYTDQTESKFLEYKEASKYRDKIKIEGILIENSIEMLYKEIVKLIQDGKISKNNTVLDTTLGFKEIGIVFYRISVEKQIKSINWRETMLPNYKPAADNKNEFVKGKGQGPRMSLVTKLNLMKEPLEESNRIYRKINENILKVNCKAVSDLYEVVGIDDLRFFYEEIGKLFNFFKMLEYSEDIENFYSDLNEALKKIFKYKFLSENISRLREYVKYLARVIYRVESDYIDIKWLKFSNNIFGITENEIKKEKDEKIERNVEDKELDDDEIKRIKEKKTEWENIDFYSDEDDEGKDALELEKSIEMVDYFLYLLLKQAIFEKISNYHLKSILEEYYKEEMIQEIIGVRDSVDISEDEKIKLIKNILFEELTEEYELEEFEIPDLADKNVGLLKYKGGILDIPFEDEGKLEILKINFKEEYFIRKRDKRQEFDISKVENRIKLNKKIEIKMKLEEILDKNNKDEINFPFKISEKSDIVEIQNGKIVTKSDRKTKVKNIFFNNSDSIINVPIVELFKNIEKNKFEISKKDLEYKFGIKDQKVTKLKDIIFGINQIIRRKIEEKYPKKDDVEDFIIYENGLKINLKYR
>NZ_CP016753.1|WP_094080044.1|1315757_1317890_+|hypothetical-protein
MENNILIMSLSNNLEKNIEKAKKNKKEYRWENKKYDLEKYEYLTKVYLEELKPNKIIVFGTDQSSWNYLYNLLNEYFYSEKEDVVFLEEQKNDVEYIRKVFKERFPDKCKIFFIESKNKFDNENIVSDLVFQIEEIKNILDEQSRSKVYVDITGGLRIMYMSLVSIINILKMYYSQLNLKVLYSQNDINTDYFQIIDITNVLEKLDFVDAVSSFTKYGSIAKLRDIIQNEALLNKLEELYIKLQFNLKNIDDTYKTLTEIKGKNENEKILKERVKKLKTLKNEKYHNKVKNYGLEIVNKYESDNIKYKNLKDKRNKIVHPLNKLGEYITNITNNKNLHKKRILIWNLGSGESGKGYKEVLYSYSDNEKSADIITRYTFESYLEDYNQIYIFGLETGKWDILTEDFKNKGIMLPNDKIKYVQIDNFGDIDELNLKIENEIKIKKQEIIEIDMDITHSFRNIPFNLLTSLRLFELLNDNIVLRSIYYGERILNSEYGSIYKIPILEIINLYKSIVEFKDYTKYTNFLENTKMIDEKLLKIMRKISEAYTYNEYRKIIEISKEFEKVNNKELDLINKKIYEIIEVKLIKNETYEELMKFVKNQKNSKNYALASFFLIDIYKYKIFKIDSKEKSETFYKKIEKLKNKYVDNKLKKLIDCLNKLNNIRNYAGHINIREEVNLINFSDSLEKAIKIMNKLTLKDIEKYEKEYEAIE
>NZ_CP016753.1|WP_094080794.1|1315325_1315712_+|hypothetical-protein
MMERKALLLFSHQLTENQEKELVENFKVKKIISLSSELQKMWSNVSIKENYKENLEKIKKYIEENFNENDVMLVQGNWGYTYNIVKWSIEKKLVPVYSYTERNVEEIKDGENVKKISYFKHVKFIEYE
>NZ_CP016753.1|WP_094080053.1|1327301_1328054_+|hypothetical-protein
MNGVILELSAVEDKIIDNKKMYSFEIHKRMSEILKIDKREELRVSNIFGEFFNESIKLEKGEKYKIRVITKTQEIFLKLQDQLFQLAINKENLVIGDGIFQLVGIITKNDTWCGEYDFDKEMKALDVGILSFYEKVNLKIVNPILVKGKSIFGFEKILKIILQNVEEDTGFETQEMEESILNSITIKKELYREKRVNLLNDEIKKVYLGDVELVLQGYYGKMLLIFLQYVKYVGVGEFREYGFGEIISRS
>NZ_CP016753.1|WP_157697361.1|1328131_1330099_+|hypothetical-protein
MSEKDQTFKNQTFEDVLKENRVLVSIETVKIKDFIFSTNKLKLIRGASYLLDYMNQVEVPRILKKYGLEYNSKELVDEIYNINADKEFLEKVDEEIDKAIDKRILYIGAGNAKFLVDSEKTAEKICKEIKEIYKNLAPSAKVVAECYPMKENEKIWTAIDELAQKTAEKKSEGFPMLNIDLPFAMKCDLSGTEPAVVSLKNLEKDLKKIEIHRSGEGSDDDKQVEDTITAIRNVIKKDNMKISEESAVKIKYSNKMIKDDVNEIGFYSIIKKALNYDIHLNTEIDDYSVGDSFIGFVYSDGDGLGDFLKNVKKVYTTEEEYLKFMRKFSVILDRNTKYVLKEVIKKMYDAEKFVKKKTILKDGKPKYKIINGEKKIVEKSIIGEFLIVGGDDVCAVFPADLAIEISYEFQKEFEKKMNEFTKIENEKNEKKNPENITSSCGVVIAKNKTPMFQLFEQGLKLQKSAKAKRYQENKNREGKVRTGYIDFQVIGNEGNVNIKEYRKKWYDKFDKEDENKGKLHVSRRPYSIRGLEKEEYKDVSESIDKLIDQVKKLKTKNFPNTKIRYIYDLKKDDTKTDNEKIMESINILSKMSTEEIQVLNKLWGIKDKMNLSFENENKNEKFKEFFDNIFDVLEIYDFIQKDKSSSEKEDNNSGN
>NZ_CP016753.1|WP_157697362.1|1330088_1331912_+|hypothetical-protein
MGIKIGYEVELLTPAITAETGTIGKEIDVEVKRDKNGTPYFSAKHIKGVFRAKVLEFKNALSGDGKEFTEKYFGSGGNNPSKIRFSDLKLKIEKNIGDEGYQRRLENKIGNRYGVKINRKTRVAEENSLFNYEFVKPKNIYAGSFELSNDFFEKSEEDIKFLLSSFLHIDKIGGLKSRGLGKVLVQFVSIENDKRNNFKEENDRFKIVEKILKEVKSKNNYKNQGIKKLNELEKYKYTLNFVEPAVLQGKVNKNEVELRKSLQGSSIRGAIIQYGLDNGFESEIEKLLKIKISEVRKFVREDKNEIKEEFKLASGFKTKYPIEADKYKKIDKAVSVMKEYKVNEKDENGIKLERDSLALLNATGTELSIKIDEKTRTTEESLLFSTEYTDLTNVANKEEVFFKGNVEIPKGLFEIGKKYELKIGKYKTKGFGKVEIEFKKFTDENDKNIGERIKELNDEIKKDFKEFDKRNDKEKVYFGDELLKEEKQKLITFDFLSDMILPFNEISNVGKQILELFDENFGEKLTLNNRRTFVNVEKLRGYNIINNSRKMDEIVITQGSVISYCINNEDLEDILEKLEKIEENGIGLRRNEGFGRVRICSERKYEK
>NZ_CP016753.1|WP_094080055.1|1331935_1332229_+|hypothetical-protein
MYTFIPERKNKIAKKESLEKNLSVEELFLKDINEEFVDNLEKEKILKKFLENDKFKEIISDIEKKEEKKEVLNLSQFKRFYDFIKERKFDFFDEEKK
>NZ_CP016753.1|WP_094080056.1|1332479_1333310_+|hypothetical-protein
MDFSTFKNKYILTGKIVVLNALHIGSGREKDDRDAPFISLDDDKNFYIPGSTFRGYLSTKLERFLDSGNGFKIKNNGEELNEADVKLIFGYTNLDKLETKINDKDNEEDRKLKENNRKIQDRIIRKLNAKNLDEVKSLAGRIHVSDMPVLKDVKYVTRDGIKIDRNTGATEKRAKFDYDVVPAGTEFDLNIELENIENYQLDLIGLALNDILKDNGDLFGGKTSRGIGKCRLKDLKMKYVTSEDKEKLKKYIFEGKFPYEIKEQEKIFKTENLSLD
>NZ_CP016753.1|WP_094080057.1|1333320_1334226_+|hypothetical-protein
MTKEFLKLENKLVLELEIEPISPLIIKLGDGSEEENSNKEKSESVISFVTSDSPRGNLVKYDKNNKSKDCRKGEIFIPGSALRGLFREKFNKIYDITKDDESNFKEKNKNHREVDNLFGWIEGEEAQKGRIFIEDAYLEKEELRKNFYLKNIDEALSEVIMKRDITPIDQFTGKAVVPLNYECTMEKFETELIINNISLEEMKNIYFILRDSYLGEIRLGNSKTRGFGQVKFNIKSMVIENYRDKTKFVVNLKNYFEIDFLNSIKLGNEFLRENLRLKKEFKEINVKNPNEFIKALFREVE
>NZ_CP016753.1|WP_094080058.1|1334225_1334657_+|hypothetical-protein
MEFKKFDKEKMKQELQNDICNLVYINYEKENGIKIFKNEGNALNLLPESDFENFYKIYIFNNNFMKTIYKFGEDDCRYSEVNSEEFVENTKKFREILIEFKADQDKKEYNRLKILIGENKVSGKEMIQFLGFSGGAKNERESN
>NZ_CP016753.1|WP_094080059.1|1334637_1336752_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MKGKVIKMDNSTKEVEIEVKRKREKYTVGKAIFNQKKFQEGDNIEYNLKGKNFEFVKKISSEEMRDTRNNFSNNTKFGGNKHKSKEPVKVKQYPYNFVSLKDKKDVVYKGERKLGTNTGKLVCKLVNKTPLFIMGESEQDNKGHTKEWFCREKGIPIIPGSSLKGVIRNIIDVLTNSVIRNVEDEKLEQRMGAGKFESVFGIIESLPENGKKGIIVEAEKIKVKTKEKIESGYKKFEFKDNGKEFSKKYNAKDGLIERVKLKDSIYNLKETEIKIKPGVTTVEKLINNSKEYKNYLTDNENGVQGVLWFSSPIYGKIHEKLLIPKKNGRKFEFSKEEYEDFKYIIKQRAERIKNGKDINSNTFYYDKDLEIGDPLLFEVKDRKMAEHLAFSEIPRLRYKFSPLDLVSEEFRPGDSLKKLSFSERLFGTTGDNTKKDEEKKDELVALSGRVFFEDAKNYKPEMIDNGNLVTLKAFGEPHPTLTTFYLDNIEKNYNENKGVSIRGRKFYWHHKEKIGKSFSEYRKSVEMPKIKNKNGKYEKELAYNSSLELMDINNEFEFSVNFENLTDEELGVLIYAIELEDGLLHKVGKGKAFGFGSCKIEIEGFLLENKNKYKDFFIEPFEKENKKEDYINKAKEKRYFDEKRKNIKELKAILSETNDLDFSESPFPEATNKKGETNSLNWFVNNKKGDRKIVLLSILDKNPK
>NZ_CP016753.1|WP_094080060.1|1336772_1337423_+|hypothetical-protein
MKYSILKFKRNEKHSMRDLEKLRGFLADKYKENVLFHNHLSDGYNYSYPKLQYKLIKNTLSVMGIGEEVIEINKKLFEEVDYLNIDGNFIFDIQKELEIYDEEIKYTGDKMYEYRFVTPYLPLNEKNYAKYLKREYTLEQAITNNILEVLKGLGIWLDRENKIYVSQNLEITSRDLKNVNMIAFIGSFSVNMKFPDYFSIGKRKSIGFGTFIKNNF
>NZ_CP016753.1|WP_094080061.1|1337695_1338085_-|hypothetical-protein
MKIRYKNSKNIIDYLVMGICYFKNNKKPYYLIEEENEIKWVSEICIDIEKSKMPFNWSISLGNNSKYDFLCGYYELCNLPEHFEGIISRNKKDLEIFRKRKNELEIWLEKLDYYNKEVTFSDILSKIKF

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Crispr_ID: NZ_CP016753_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016753_4

1930812-1931450

Orphan

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	CRISPRCasFinder
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	CRT
GTTGAAGTAGTGTATCCATTAAAACAAGGATTGAAAC	PILER-CR

8 spacers

The CRISPR arrays of NZ_CP016753_4

>merge|NZ_CP016753|4|1930812-1931450|CRISPRCasFinder,CRT,PILER-CR
ATTTTAAACCTTGTTTTAATGGATACACTACTTCAACTGAAATTGTTTCAAACATAACTCAATTCAGAGATTTGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACTAAAAGATTTCAGCAGCAAGGAGATTGCTCAGATTAAGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACCAGGTTACATCTATGAAGGAAACAAAGAGAAAGTTTTTGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACAAAAAAGCAGGAGCAAATAACACAAGATTAGTGAGAAGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACGAGTATATTCAGTATCAAAAGAAACAACTAAAGGACGACGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACTTTTCTGATGATTGTAATGTATGTCCGAATTATTGGGCGTGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACACTTGAATAAACTTCTTAAAAGAATGTTCTTAATCATGTTTCAATCCTTGTTTTAATGGATACACTACTTCAACACTCGAAATATATTATACTGATGGTAAAAGAAAGTACCGTCTGTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC

>NZ_CP016753|4|4|1930812-1931450|CRISPRCasFinder
ATTTTAAACCTTGTTTTAATGGATACACTACTTCAAC	TGAAATTGTTTCAAACATAACTCAATTCAGAGATTT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	TAAAAGATTTCAGCAGCAAGGAGATTGCTCAGATTAA
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	CAGGTTACATCTATGAAGGAAACAAAGAGAAAGTTTTT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	AAAAAAGCAGGAGCAAATAACACAAGATTAGTGAGAA
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	GAGTATATTCAGTATCAAAAGAAACAACTAAAGGACGAC
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	TTTTCTGATGATTGTAATGTATGTCCGAATTATTGGGCGT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	ACTTGAATAAACTTCTTAAAAGAATGTTCTTAATCAT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	ACTCGAAATATATTATACTGATGGTAAAAGAAAGTACCGTCT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC

>NZ_CP016753|4|3|1930812-1931450|CRT
ATTTTAAACCTTGTTTTAATGGATACACTACTTCAAC	TGAAATTGTTTCAAACATAACTCAATTCAGAGATTT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	TAAAAGATTTCAGCAGCAAGGAGATTGCTCAGATTAA
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	CAGGTTACATCTATGAAGGAAACAAAGAGAAAGTTTTT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	AAAAAAGCAGGAGCAAATAACACAAGATTAGTGAGAA
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	GAGTATATTCAGTATCAAAAGAAACAACTAAAGGACGAC
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	TTTTCTGATGATTGTAATGTATGTCCGAATTATTGGGCGT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	ACTTGAATAAACTTCTTAAAAGAATGTTCTTAATCAT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC	ACTCGAAATATATTATACTGATGGTAAAAGAAAGTACCGTCT
GTTTCAATCCTTGTTTTAATGGATACACTACTTCAAC

>NZ_CP016753|4|3|1930813-1931450|PILER-CR
TTTTAAACCTTGTTTTAATGGATACACTACTTCAACT	GAAATTGTTTCAAACATAACTCAATTCAGAGATTTG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACT	AAAAGATTTCAGCAGCAAGGAGATTGCTCAGATTAAG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACC	AGGTTACATCTATGAAGGAAACAAAGAGAAAGTTTTTG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACA	AAAAAGCAGGAGCAAATAACACAAGATTAGTGAGAAG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACG	AGTATATTCAGTATCAAAAGAAACAACTAAAGGACGACG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACT	TTTCTGATGATTGTAATGTATGTCCGAATTATTGGGCGTG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACA	CTTGAATAAACTTCTTAAAAGAATGTTCTTAATCATG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAACA	CTCGAAATATATTATACTGATGGTAAAAGAAAGTACCGTCTG
TTTCAATCCTTGTTTTAATGGATACACTACTTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016753.1\|WP_094080562.1\|1919899_1921303_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080824.1\|1924967_1925822_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215443
NZ_CP016753.1\|WP_094080570.1\|1934626_1935634_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_CP016753.1\|WP_094080823.1\|1924079_1924616_+\|DUF1003-domain-containing-protein	unknown	unknown	gnl\|CDD\|377629
NZ_CP016753.1\|WP_094080568.1\|1931829_1933848_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP016753.1\|WP_094080569.1\|1934018_1934504_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080573.1\|1940084_1942184_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236069
NZ_CP016753.1\|WP_094080566.1\|1925936_1929446_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|273959
NZ_CP016753.1\|WP_094080576.1\|1943217_1944654_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP016753.1\|WP_094080565.1\|1924623_1924938_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380386
NZ_CP016753.1\|WP_094080564.1\|1922355_1923741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016753.1\|WP_094080825.1\|1929499_1930063_-\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NZ_CP016753.1\|WP_094080567.1\|1930074_1930668_-\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NZ_CP016753.1\|WP_094080561.1\|1918227_1919730_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP016753.1\|WP_094080563.1\|1921305_1922304_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405
NZ_CP016753.1\|WP_094080574.1\|1942266_1942638_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|179603
NZ_CP016753.1\|WP_094080577.1\|1944779_1945928_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|236075
NZ_CP016753.1\|WP_094080575.1\|1942649_1942889_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP016753.1\|WP_094080572.1\|1937530_1940038_-\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_CP016753.1\|WP_094080571.1\|1936992_1937493_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP016753.1\|WP_094080824.1\|1924967_1925822_+\|hypothetical-protein	gnl\|CDD\|215443	PLN02829, PLN02829, Probable galacturonosyltransferase.	0.00250451
NZ_CP016753.1\|WP_094080570.1\|1934626_1935634_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP016753.1\|WP_094080823.1\|1924079_1924616_+\|DUF1003-domain-containing-protein	gnl\|CDD\|377629	pfam06210, DUF1003, Protein of unknown function (DUF1003). This family consists of several hypothetical bacterial proteins of unknown function.	6.5202e-31
NZ_CP016753.1\|WP_094080568.1\|1931829_1933848_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP016753.1\|WP_094080573.1\|1940084_1942184_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236069	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP016753.1\|WP_094080566.1\|1925936_1929446_-\|methionine-synthase	gnl\|CDD\|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0
NZ_CP016753.1\|WP_094080576.1\|1943217_1944654_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	2.85949e-88
NZ_CP016753.1\|WP_094080565.1\|1924623_1924938_+\|hypothetical-protein	gnl\|CDD\|380386	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain. This family includes bacterial and some eukaryotic proteins homologous to reut_a1446, a Cupriavidus pinatubonensis protein of unknown function that may be related to mannose-6-phosphate isomerase. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.40108e-36
NZ_CP016753.1\|WP_094080574.1\|1942266_1942638_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|179603	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI.	1.03745e-34
NZ_CP016753.1\|WP_094080825.1\|1929499_1930063_-\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	6.35969e-32
NZ_CP016753.1\|WP_094080567.1\|1930074_1930668_-\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	3.59092e-45
NZ_CP016753.1\|WP_094080561.1\|1918227_1919730_-\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP016753.1\|WP_094080563.1\|1921305_1922304_+\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	3.22279e-05
NZ_CP016753.1\|WP_094080577.1\|1944779_1945928_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|236075	PRK07683, PRK07683, aminotransferase A; Validated.	3.50785e-125
NZ_CP016753.1\|WP_094080575.1\|1942649_1942889_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.56047e-11
NZ_CP016753.1\|WP_094080572.1\|1937530_1940038_-\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	1.00251e-48

>NZ_CP016753.1|WP_094080567.1|1930074_1930668_-|chromate-transporter
MGTLFKLFFSFAKMGLFTFGGGYAMLPMIKREVVEKNKWATEDEIMDYYAIGQVTPGVIAVNTATFVGHKVKGLIGSIFATMGMIVPPIIIITLIAIFLKNFSHLMVIKYAFNGIRACVCVQVFQAIFMMAKKSLPDLICIVIFILVIIFSVTNILDPTLLVILAGVTGVIIKNFTRKKDGKKSDEDSQKIGNGGRE
>NZ_CP016753.1|WP_094080825.1|1929499_1930063_-|chromate-transporter
MKLLHLSIEFGKVGLFSVGGGLATLPFLYHMGQRTGWFTANDVSDMIAISQSTPGPMGINMATSVGFTIAGLWGAVIAPIALTIPSIIITIMISNALRKFQDSVLVQDIFYGLRPASIALIVTAGISVAKGSLFDIEKYNLSKNIVNLFDYKSIILAIIIAILTKFKFNPILLIVLSAIAGIIFKFQ
>NZ_CP016753.1|WP_094080566.1|1925936_1929446_-|methionine-synthase
MATSQYKNSYDFLQNDLKNRILLLDGAMGTMIQKQNLTADDFGGEKYEGCNDYLVLTKPEIIKNIHKEYLKSGSDIIETNSFGALDIVLKDYDLEDRAFEMCKRAAELVNEAILEYRSENPDDTRHLYVAGALGPSNKSISVTGGVTFDELVHTYYTAVSGLLAGGVDLILFETIQDTRNLKAAYLGLKKAMEENYTVPLMLSFTIESTGTTLAGQTADAFYYAVNHMHPFSVGLNCATGPEFMTQFLKTLNDISNTYISVYPNAGLPNEDGEYEETPVTLANKLEPFFKNKYLNIVGGCCGTTPDYIKEIKEKTVNYEPRNIDKDKNFNNLSGLISLETPKDRPIYVGERTNVIGSRIFKNLIAQEKFDEATEVARLQIKGDADVIDVCLANPDRDEVADMKAFLEKVSKFAKVPIMLDSTDINVVEKGLTYLQGKGIINSINLEDGEEKFKKMAEVIKEFGAAVVVGLIDEEGMAVSLEKKIKVARRSYELLTKKYGIDERDIIFDTLVFPVATGDQKYIGSASATIEAIREIKKEMPNVKTILGVSNISFGLPIAGREVLNTYYMNKAYEAGLDFAIVNTEKIIPMDEISDEEKELSENILFHTDDENVSKFANFYRDKKATKKKVDVSNLTAEEKVSNLVVEGSKKDLTVLLDELLKKYTPIEIINGPLMTGMDEVGRLFNKNDLIVAEVLQSAEVMKASVAHLEQFMEKDESSVKGKIIMATVKGDVHDIGKNLVGIIIGNNGYEVIDLGINTPAEKIRDAVVKEKADFLGLSGLLVKSAAEMVNTVAVLREAGISIPIFVGGAALTEKFTVNKIEPAYENNIVIYSKDAMTALSDLNKMIDEKKFEEFREYLQKRRDLLLIKDEKELQKLKVKQTVSDIKDKDGTFDYSEIEIPKYNFEKIYKPETLNKQIITNIKAKDVFPFINLQMLIGKHLGLKWIVGKMLEKQDPRTVKIYNEIKDIIEHGDEYFDITAIYKYFPVRRKYGKEKNEFSLEILSDDSSKVIETFNFPRQKYGQYLSLNDYVNPDGIDYVGFFVATAGEKSRIVSNELKAKGEFYKGHLVNSIGLELAEATSEYIHQIMRKDVGIIDKELQTEDILKANYQGNRYSFGYPACPDLSDQKKLFKLLKPEIYGIKLTDEFMMYPEASVSAIVFSQPFCKYFNM
>NZ_CP016753.1|WP_094080824.1|1924967_1925822_+|hypothetical-protein
MMLLIFSLVVAILAGIPYIKKTVEDNKKLKEFVENGMGKNEAKGKLRDEKTSTDKVICYLFYFSFVVFVISGVYNIYSLTQNNGMGSDSTAQTQLQPTSSMPEVSTGPNGETVQSHNNTNSSDSQNIPATNKNLNSSSENENDAAIQNNVRREQNRINKMFEESERNTKDLLSAFTRNVQNKEAEEGIKNGEKALKNVKKSNEMFKNAQCVQTGDTSFDKECPKLLEQGKELYSSKQVTVEKALEMLKSIEKGIKDVQSSQIGQEVMKKGEELWDNIKKNINGN
>NZ_CP016753.1|WP_094080565.1|1924623_1924938_+|hypothetical-protein
MNIFDLKKFENFENNEEIITILEKNKNIKIERIISEGQTTDWQSCDKNEFVILVQGNAEITYFKNSEIVKLSSGDTLLIKKNKKHKVSYTSKNPHCVWICIFYN
>NZ_CP016753.1|WP_094080823.1|1924079_1924616_+|DUF1003-domain-containing-protein
MLKSVDDDLKREEIIHMLLEQKVSKVIKEEKDEKIKISNKISRFIGSKKFINLVIAVVAIWLFINLIFIFNKQFDSYSFVILNAILSFVMLLFCSLIIINQNKSKKLDEKKSLNDYKVNLKNEIVIEDLHYKLDELIKKQNEMAQRVAQLENKKGKNNKKERTFKFIDITETEKEHDS
>NZ_CP016753.1|WP_094080564.1|1922355_1923741_+|hypothetical-protein
MKKIFLILLLLFTIVSCELKKAQEAYDNKEYIRSIYLTLSYFEKHPNKVEKIKPDIKNEIMEKFSNIVNYYKTEAGSSNLEERQDGYEGLYKIYALFDVYSQSSNFTDFLSKYDGDELLGEIYKIIDERIKTGELEGKYSRDIISILDEYYRNMIGYTKELSEIKKIDENKILKYESISRKMSQAEADKLIEYANIKEKAEEYREAQKLNEAAQETYGQYQKNYKNMYIKIRELKKKADYQEADKLYQSAVRTSGAVTKHGYRESIEKLKKVQEIIPNFKDSKEKIAEYSKKAYVKYNISGCDNSHVPAYINGHLSKVGVYTKYSSEAEVQINCKVTDNYQVSTYPSQIKNLSQVKDVKNSDGQTVKKEFIFQESKTKSVEKLDFSYEIELSGYVKKKYSGNAYKQHEINSLQYLGNVPSEYSGKDKIEKLWGESEMRRKVYDSASFFKDLEDIVKELEKL
>NZ_CP016753.1|WP_094080563.1|1921305_1922304_+|hypothetical-protein
MKNKIKKIILVSTFCFLPIIAKSQSLGNISGISKLENFSKIKNIEAEKILDYDTQIVLNNNLAYEKENNKLFTGVAVQKIKDNIKNINFYENGNLISYYKYFLDGNIEEAKEIDKEKNQVIIQKYDKNKKTASQKIYENGFLKSENQYVNGNLTAEYKSSGKENGKFIYYNGNKKVLSEMEVLQANKKGQSYQIPKTIKIFGKNGKIEREYTFENGTLENQTQKVYYPNGNLKYTGIAKNNDMINMEIKDLYEEYNSNGTKKMSCKEIETDKWSCEYYKKNGELKIRKQIKKDFSKNLATSKYIYDNEPGMNFLKSVGEGIGNIFLMILEGI
>NZ_CP016753.1|WP_094080562.1|1919899_1921303_+|hypothetical-protein
MKKVFLILLLLFTIVSCELEDAREAYNKKEYLKSIELVFNYFETNPKKINKIKPEIKNEIMEKFLNITNHYKEMTGSRDLSERQKGYEELVKIYALFDTYKNSSTFSDFQQKYPLDESLNNIEKIITQRLKNNNYNYEYYGYDHFKDVTNDINNYYEDILKFIDSMEKNPKISNEMALKYKEISKQINKNKANKFIEFANASENKKNYREAQRFYEEADKLFVITRQDAKKVSIKTKELKEKADLQAAQNAYSIALSSLKNAKTRNDYRNAVWDLERANELVPNYKDSVSLISKYKDKIYVKYNIFGCSNSWVEKYLDKKLENVIGKKTSANSAEVQINCRVTDNYNISTFPSNIENLREIREIVNNAGEKVTKEFIFQKIKSLAIEKITFNYEIEVSGLVKQRYSNNLSEKNEVHSLQYIGDIPKEYKDKDKIEKPLGETKMRNKILEKSNLERELNQIIDAMDRL
>NZ_CP016753.1|WP_094080561.1|1918227_1919730_-|threonine-synthase
MNYKSTREINPNNVKSSTFAALHGLCEDGGLYIPEKLPDVKLTYDELKDLSYQEISEKIIKLFFTEFSEKEIKTAINNAYNSTTFNDKNIVPVHKLNDKVSFGELFHGRTLAFKDLALSLFPYLLLLSKEKQKEDKKILILAATSGDTGKAALEGFKDVDGINIVVFYPKNGVSPMQEEQMRKQLGNNVEIVAINGNFDDAQSAIKVIFSSDEFKKYANEHDVMFSSANSINIGRLFPQIIYYVTTYVNLVNAGTIKAEEEFNVVVPTGNFGNILAGFIAKKLGVPIKKFISASNKNKVLADFFQTGTYNKNRDFYATNSPSMDILLSSNFERYLYYALNEDSKRVSELIKNLLSGGKLSVSDKELENIQNEFYGEFANDEETVSAIKKIYENYHYLMDPHTAVAYSVYEKLDEKHLDKDIHTVIMSTAHPFKFPAPIAKALGIDDTKEPYAILDEVSEITGVKFPEKLTEVRNSEIRFSDVIDKADIQKFVKNYIKNLK
>NZ_CP016753.1|WP_094080568.1|1931829_1933848_+|NAD-dependent-DNA-ligase-LigA
MNSLDNEILKNYTNLKNKIEKYNNLYYNEDNPIISDMEYDGLLRKLKEMEKEYPTLLEIDDSPTEKIGGTASNKFSKVEHKVPMLSLSNTYNIAEIEDFDKRVKKIINFSEKIEYILELKLDGLSISLIYENGNLTRAVTRGDGKIGEDVTENIMEIESIPKKLKEPISLEVRGEIILPIPNFNKINEEREENGEEVFANPRNAAAGTIRQLDSTIVSKRGLDCYLYYLVNAENYGIKTHLESIKFIEKLGFKTTKVFEKYSDFKTLEKSIEKWRIKREKLDYETDGLVIKINDFSFYETLGYTTKSPRWAIAYKFPAEQVKTRLLDVTFQVGRTGVVTPVAELEAVNLSGSVVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRKGTEKEIKEPESCPVCGTKLVKEEGLVALKCLNPHCPEKIKREISYFVSRDAMNISGLGEKIVEKFIELEKIKTVVDIYFLGNYRNELENLEKMGKKSVENLLNSINESKNQDFSKVLYALGIPFVGKFNANLLSKTFKDIDVLKEKSVEELLEVKGIGEKAAIAVNTFLNNENNWKIITELKEIGLKFKFEGNEIKEVKDNPIKGKNFLATGKLQKYKRNEIKDIILEKGGNYLSAVSKNLDFLIAGEKAGSKLEKAQNLGIRVLSEDEFEKEFL
>NZ_CP016753.1|WP_094080569.1|1934018_1934504_-|hypothetical-protein
MKKIRKIGIMFLVLAISISVIACGNQNKSKKVNDFSSKTEKESEEKLKASYGDGENRDFTTDGKLHEDKFLNKKFGYTDTSDEFEIKKDAKGYYVISYYYDEDNEDAQAEKEVRRLKVYKNFALVKEDDDNSMVYAYDTKLKKLVFLNSNGKIFLEATEME
>NZ_CP016753.1|WP_094080570.1|1934626_1935634_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MEKKIYKAVNWNTPENDYVETFWEQNIRQFWIDTEYIPSRDIDSWNALKPEMKLAYLHALGGLTMLDTLQSHTGMPKIIDHIDSLQNRSVLSYMCMMESIHAKSYSTIFTTVASTREINETFNWVQENPHLQYKANKIDNYYQKMNNPEASRRDIAMSLAASVYLETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFDEETKKGMRDELKTLLYDLYENECRYTDEVYGDIGLTGDVKEYIRYNANKALMNLGFEEEFEVKNVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFGFDDDDDDDFDI
>NZ_CP016753.1|WP_094080571.1|1936992_1937493_-|hypothetical-protein
MINLDYRTNNPRWGLKGIYFNNLYEYIKTLGFLSNIRHYKNTSLNQSISYFDKSISMHVEGNDVDGAWNEECRIHYYKDEAQLNSVLVSLYNAKSAGVGSISLRINSNLYINHLINDFNFVVQGNDYVKNVLPSLNNTTILSILINKIKEISSDEIKRVFFEGWNL
>NZ_CP016753.1|WP_094080572.1|1937530_1940038_-|DNA-cytosine-methyltransferase
MRNKRQHTYISLFSSAGVGCFGFKEENFKCVATNEIIERRLNIQKINNKCELETGYICGDIRNEETKEKIYNEIKKWCNVQKNYIDVVIATPPCQGMSVVNHKKSKDEINRNSLVNESVEIIKKIQPKFFIFENVSTFWKTGCIDKAKKIISIGEMITEELGKEYSLYKDVINFKNYGSNSSRTRTLVIGVLNKFSDEISPVELFPDYRKERTLREIIGNMPSLRWGEYDKNDFYHNFRIYPKHMREWIKEINEGESAFDNKEDLKKPHRIINGEIIINQSKNGDKYRRQIFDKVAPCIHTRNDQMASQNTIHPKEDRVFSIRELMKMMTIPDNFKWLNLELEELNNLTLEEKRKVSKKEEMNIRQSIGEAVPTEIFRQIARKISKFLEKNNLSGSEIKNISTTLKTKKDIKKFIEKNYEKYNFSILSKIIELSNSKREKHSAYYTNKFIIQEIFKQLPNFDNKEITILEPSVGIGNFIPFIFKKYENISKVNLKLIDIDKNILEILKLLISKIEIPENFNIEFINKDFLDYSETEKVDLVVGNPPFTKLSGNYLKEKIKKNHNKETKNLAELILEKAMKIADNISLIMPKNILNTPEYEKTREILSKKKVESIIDFGEKGFKDVLIETVNLAINMKLPPKKTEIISITRKEQVIQNQNYIFDQKLPYWIIYRNFDFDKIYGKMIFGVFEVFRDRQITNSNSHIGKLSDNDIRVIKSRNISNDGEIENIENYDAYINKNDLQNFQVKKYLNDEKVYLTPNMTYNPRLMKKEKGYIVNGSVAILIPKYQFELTEAQKRYISSDEFRAFYKIARNYQTRSLNIDKTSCYWFGINTEI
>NZ_CP016753.1|WP_094080573.1|1940084_1942184_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MVDNRAKKWIYLNNEIMIKKGEDFQLEKDKEAVYSYFVDYVNKNTVFFHNLEEKMRYLIKNDYYIDFYKMYSHDEIKEVFKLVYDKKFRFASFMSASKFYQSYALKDDTEQKFLERYEDRIAIVSLFLAQGDVEKAKEYALMLINQEYQPATPTFLNSGKKRAGELVSCFLDEMGDNLSGIGYIFDSSMKLSSLGGGVSINLSKIRARGEAIKGVEGRASGVLPIMKILEDIFSYANQLGQRAGAGAVYLNVFHSDINEFLDCKKINVDEKVRIKSLSTGVIIPDKFLELAKEGEVCYTFNPHTVFLEYGKYLDEMDMNEMYEKLIDNPNVKKKKVDAREILVKISQSQKESGYPYIFFKDNANKEHALKRIGSVKFSNLCTEICQLSEVSDINAYYEEDTIRRGISCNLGSLNIATVMENKRIKEVTKAAIDSLTMVSDLTNIDVVPTIKKANEELHSVGLGAMNLHGFLAKNFIMYESREALDFCNVFFMMVNFYSLERSMEIAKERDETFKDFEKSEYANGKYFDKYLEKNYEPKTDKVKELFEGMYIPTTEDWAKLKDQIMKYGIYNAYRLAIAPNQSTSYIMNSTASVMPIVDMIEVREYGDSKTFYPMPYLTNDNFFFYKSAYDMDQKNVLKLMSVIQRHVDQGISIILHTKSSDTTRDISKLYIYAHKLGLKSLYYTRTRKATIEECISCSV
>NZ_CP016753.1|WP_094080574.1|1942266_1942638_-|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MVIYYDSKTGNVQRFMEKIKGERPNWEIIKISSDLEVKKDGHFVTFTTKIGEVPETTARFLEKNSKYIKSISSSGNMNWGVYFAVAADKIKEKYGIPVCMKFELSGTNREVKHFIDYVEKNNK
>NZ_CP016753.1|WP_094080575.1|1942649_1942889_-|thioredoxin-family-protein
MKKIIKFEKNDCNPCAMVSKFLDKKGVKYERINAFDNPEMAMKFRVRTVPTVILMENDAEVKRVMGFKMEELNEMASEL
>NZ_CP016753.1|WP_094080576.1|1943217_1944654_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MENKEKKILKKGDKIQLKIAGLNTKGRAYGFYGDDENRIFPNINAAEGQIVEGIFVKRRRKYELIRCEIIDFAGRKNAIYDEIARQNGGCNYQYYSYDEQLAMKNFNIEKEVKKIAKYDFTFEEPVRSVEVEKYRNKMEFSYGNAMKDGPMILGLHKQNSFHDIVEVDGLKLMDDSFNKIYVFCNEFSKATGLDFYHRLDHIGFFRNLVIRKADFTKQILVNMVTTTQIEDEKKLEFQKGLVEGLLALELENEFKITGILHTFNDNFSDSVVSESEEILFGKRDLEEEILGLKFKISPYSFFQTNSKTVAKLYGKVLDYLDEIEGENIHNSVVFDLFSGTGTIGQIVSKRAKQVYGIELVEEAVEKANENAKLNGIENAHFISGDVFEKLDEFDKNGIKPDIIILDPPRAGVGEKTLNKLLKYDVKDIIYVSCNPKTFNIDLKILQENGYKLVKMVTVDMFPVTQHMEVVSRLRKIEK
>NZ_CP016753.1|WP_094080577.1|1944779_1945928_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MYIDPIIKGIEISDIRKIHERLSAYKNVINMTIGEPDTDAPKKVKEAIAYHALNSPIKYSPVGGMPELREKIAKFYNEKFGGNYNKDNVLVTVGSTEGLSSTLKTILAEDDEVLIPTPAYVGYEPLIRVARAKTIFMDLEENNFILTEKILEKYITPKTKLIILTYPNNPSGITLPEEEMIKIVEFLKDKEIYLLSDEIYAQIAFEKFTSFAKYSDILKEQLIVVNGFSKSHSMTGYRLGYTIASENLQSQVKKISQYTVTSASTLSQYGAIAALDYCSDTTELSEIYKKRVYYFVEELEKLGFKCLKPKGAFYVFATYKTIDKFKNVGSFDFILDLLEKTELAIIPGITFQVEGYVRFSIVHDLPVLEEAIARLKKYIESK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KT997873	Uncultured Mediterranean phage uvDeep-CGR2-KM21-C368, complete genome	11532-11565	8	0.765
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KY608967	UNVERIFIED: Escherichia phage CF2, complete genome	67775-67808	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	LR746311	Shigella phage vB_SsoM_113 genome assembly, chromosome: 1	147604-147637	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MH355584	Escherichia phage vB_EcoM_JB75, complete genome	75925-75958	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MG781191	Escherichia phage vB_EcoM-fHoEco02, complete genome	89755-89788	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MN716856	Yersinia phage vB_YepM_ZN18, complete genome	145670-145703	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KY290975	Escherichia phage YUEEL01, complete genome	90005-90038	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_019399	Enterobacteria phage vB_EcoM_ACG-C40, complete genome	90677-90710	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM606997	Enterobacteria phage RB7, complete genome	88492-88525	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_025449	Escherichia phage ECML-134, complete genome	90022-90055	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MH809535	Yersinia phage PYPS2T, complete genome	166456-166489	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_042077	Shigella phage Sf21, complete genome	89757-89790	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MN508618	UNVERIFIED: Escherichia phage ES26, complete genome	29896-29929	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	LR597657	Escherichia phage T4_ev240 genome assembly, chromosome: 1	90664-90697	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_030953	Shigella phage SHFML-11, complete genome	38154-38187	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MN508614	UNVERIFIED: Escherichia phage ES12, complete genome	29833-29866	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MG781190	Escherichia phage vB_EcoM-fFiEco06, complete genome	89765-89798	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	LR215723	Yersinia phage fPS-90 genome assembly, chromosome: I	91848-91881	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM606996	Enterobacteria phage RB6, complete genome	88491-88524	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MN022785	Escherichia virus VEc20, complete genome	89484-89517	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK962750	Shigella phage CM8, complete genome	91590-91623	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM606995	Enterobacteria phage RB5, complete genome	88491-88524	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MT682710	Escherichia phage vB_EcoM_FT, complete genome	31893-31926	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK373785	Escherichia phage vB_EcoM_OE5505, complete genome	92191-92224	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK373779	Escherichia phage vB_EcoM_G9062, complete genome	90852-90885	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MN508616	UNVERIFIED: Escherichia phage ES19, complete genome	28762-28795	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK327944	Escherichia phage vB_EcoM_G2540-3, complete genome	89041-89074	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	FJ839692	Enterobacteria phage RB14, complete genome	89160-89193	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM606994	Enterobacteria phage RB3, complete genome	88499-88532	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	LR877332	Shigella phage vB_SsoM_JK08 genome assembly, chromosome: 1	90493-90526	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KX130862	Shigella phage SHFML-26, complete genome	156033-156066	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK327929	Escherichia phage D5505, complete genome	91000-91033	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK327939	Escherichia phage vB_EcoM_G4498, complete genome	91389-91422	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MN508617	UNVERIFIED: Escherichia phage ES21, complete genome	28777-28810	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK327945	Escherichia phage vB_EcoM_G4500, complete genome	91876-91909	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK886800	Escherichia phage EcNP1, complete genome	69615-69648	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	LR215724	Yersinia phage fPS-65 genome assembly, chromosome: I	90892-90925	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK327940	Escherichia phage vB_EcoM_G29, complete genome	91876-91909	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_008515	Bacteriophage RB32, complete genome	90583-90616	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MK962752	Shigella phage JK23, complete genome	91546-91579	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM607001	Enterobacteria phage RB33, complete genome	90702-90735	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MT968995	Escherichia phage vB_EcoM_WL-3, complete genome	87967-88000	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	MH992510	Escherichia phage vB_EcoM_DalCa, complete genome	89872-89905	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM606999	Enterobacteria phage RB10, complete genome	88498-88531	9	0.735
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	KM606998	Enterobacteria phage RB9, complete genome	88492-88525	9	0.735
NZ_CP016753_2	2.1\|1309550\|37\|NZ_CP016753\|PILER-CR,CRISPRCasFinder,CRT	1309550-1309586	37	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	458307-458343	9	0.757
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	320188-320221	10	0.706
NZ_CP016753_1	1.15\|147183\|34\|NZ_CP016753\|CRISPRCasFinder,CRT	147183-147216	34	NC_017409	Borreliella burgdorferi JD1 plasmid JD1 lp25, complete sequence	15960-15993	10	0.706
NZ_CP016753_2	2.1\|1309550\|37\|NZ_CP016753\|PILER-CR,CRISPRCasFinder,CRT	1309550-1309586	37	CP048737	Enterobacter sp. T2 plasmid unnamed1, complete sequence	8873-8909	10	0.73
NZ_CP016753_2	2.1\|1309550\|37\|NZ_CP016753\|PILER-CR,CRISPRCasFinder,CRT	1309550-1309586	37	CP048737	Enterobacter sp. T2 plasmid unnamed1, complete sequence	19606-19642	10	0.73
NZ_CP016753_1	1.10\|146797\|37\|NZ_CP016753\|PILER-CR,CRISPRCasFinder,CRT	146797-146833	37	NC_011774	Bacillus cereus G9842 plasmid pG9842_140, complete sequence	104293-104329	11	0.703

1. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KT997873 (Uncultured Mediterranean phage uvDeep-CGR2-KM21-C368, complete genome) position: , mismatch: 8, identity: 0.765

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
tcataatctttaattcttcctttaattaaagatc	Protospacer
.******.******* ***********  . * *

2. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KY608967 (UNVERIFIED: Escherichia phage CF2, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

3. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to LR746311 (Shigella phage vB_SsoM_113 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

4. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MH355584 (Escherichia phage vB_EcoM_JB75, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatgctagaag	Protospacer
 ..*.********** ********** **. **

5. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MG781191 (Escherichia phage vB_EcoM-fHoEco02, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

6. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MN716856 (Yersinia phage vB_YepM_ZN18, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

7. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KY290975 (Escherichia phage YUEEL01, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

8. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_019399 (Enterobacteria phage vB_EcoM_ACG-C40, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

9. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM606997 (Enterobacteria phage RB7, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

10. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_025449 (Escherichia phage ECML-134, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

11. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MH809535 (Yersinia phage PYPS2T, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

12. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_042077 (Shigella phage Sf21, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatgctagaag	Protospacer
 ..*.********** ********** **. **

13. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MN508618 (UNVERIFIED: Escherichia phage ES26, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

14. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to LR597657 (Escherichia phage T4_ev240 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

15. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_030953 (Shigella phage SHFML-11, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

16. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MN508614 (UNVERIFIED: Escherichia phage ES12, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

17. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MG781190 (Escherichia phage vB_EcoM-fFiEco06, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

18. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to LR215723 (Yersinia phage fPS-90 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

19. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM606996 (Enterobacteria phage RB6, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

20. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MN022785 (Escherichia virus VEc20, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

21. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK962750 (Shigella phage CM8, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

22. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM606995 (Enterobacteria phage RB5, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

23. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MT682710 (Escherichia phage vB_EcoM_FT, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

24. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK373785 (Escherichia phage vB_EcoM_OE5505, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

25. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK373779 (Escherichia phage vB_EcoM_G9062, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

26. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MN508616 (UNVERIFIED: Escherichia phage ES19, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

27. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK327944 (Escherichia phage vB_EcoM_G2540-3, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

28. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to FJ839692 (Enterobacteria phage RB14, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatgctagaag	Protospacer
 ..*.********** ********** **. **

29. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM606994 (Enterobacteria phage RB3, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

30. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to LR877332 (Shigella phage vB_SsoM_JK08 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

31. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KX130862 (Shigella phage SHFML-26, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

32. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK327929 (Escherichia phage D5505, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatgctagaag	Protospacer
 ..*.********** ********** **. **

33. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK327939 (Escherichia phage vB_EcoM_G4498, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

34. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MN508617 (UNVERIFIED: Escherichia phage ES21, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

35. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK327945 (Escherichia phage vB_EcoM_G4500, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

36. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK886800 (Escherichia phage EcNP1, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

37. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to LR215724 (Yersinia phage fPS-65 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

38. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK327940 (Escherichia phage vB_EcoM_G29, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

39. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_008515 (Bacteriophage RB32, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

40. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MK962752 (Shigella phage JK23, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

41. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM607001 (Enterobacteria phage RB33, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

42. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MT968995 (Escherichia phage vB_EcoM_WL-3, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

43. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to MH992510 (Escherichia phage vB_EcoM_DalCa, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

44. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM606999 (Enterobacteria phage RB10, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

45. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to KM606998 (Enterobacteria phage RB9, complete genome) position: , mismatch: 9, identity: 0.735

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
gtgtgatttttaatttttcctttaatactagaag	Protospacer
 ..*.********** ********** **. **

46. spacer 2.1|1309550|37|NZ_CP016753|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 9, identity: 0.757

catttctatttttattaaaaaaccattcttcactaaa	CRISPR spacer
aatttctttttttattaaaaaacaatttccaacaaag	Protospacer
 ****** *************** ***... ** **.

47. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 10, identity: 0.706

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
cttagagatttaattattcctttagttttgtaga	Protospacer
*.  .*  ****************.**.****.

48. spacer 1.15|147183|34|NZ_CP016753|CRISPRCasFinder,CRT matches to NC_017409 (Borreliella burgdorferi JD1 plasmid JD1 lp25, complete sequence) position: , mismatch: 10, identity: 0.706

ccataatttttaattattcctttaattctgtaac	CRISPR spacer
aattcatttttaattattcttttaaatctttgta	Protospacer
   * **************.***** *** *.

49. spacer 2.1|1309550|37|NZ_CP016753|PILER-CR,CRISPRCasFinder,CRT matches to CP048737 (Enterobacter sp. T2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.73

catttctatttttattaaaaaaccattcttcactaaa	CRISPR spacer
gtatcaaagctttactaaaaaaccattcttcagtaaa	Protospacer
   *.  * .****.***************** ****

50. spacer 2.1|1309550|37|NZ_CP016753|PILER-CR,CRISPRCasFinder,CRT matches to CP048737 (Enterobacter sp. T2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.73

catttctatttttattaaaaaaccattcttcactaaa	CRISPR spacer
gtatcaaagctttactaaaaaaccattcttcagtaaa	Protospacer
   *.  * .****.***************** ****

51. spacer 1.10|146797|37|NZ_CP016753|PILER-CR,CRISPRCasFinder,CRT matches to NC_011774 (Bacillus cereus G9842 plasmid pG9842_140, complete sequence) position: , mismatch: 11, identity: 0.703

ctattcaacagtatcaacaacaacaaggacaagtaca	CRISPR spacer
ggaaccaacagtatcagcagcaacaaggacagtatcc	Protospacer
  * .***********.**.***********.   *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

746236 : 753947

Synechococcus_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094079562.1\|746236_746941_+	glycosyltransferase family 2 protein	B9UDL7	Salmonella_phage	8.2e-07	32.0
WP_094079563.1\|746959_747604_+	hypothetical protein	A0A2H4UUJ1	Bodo_saltans_virus	2.7e-17	36.3
WP_094079564.1\|747603_748233_+	HAD family phosphatase	M1I080	Acanthocystis_turfacea_Chlorella_virus	1.1e-39	46.5
WP_094079565.1\|748233_748956_+	nucleotidyltransferase	A0A1D8KNV9	Synechococcus_phage	1.6e-34	35.0
WP_094079566.1\|748955_749285_+	hypothetical protein	A0A222YXE6	Synechococcus_phage	1.1e-11	34.7
WP_094079567.1\|749289_750030_+	glycosyl transferase family 2	A0A1D8KNV9	Synechococcus_phage	1.1e-62	52.5
WP_094079568.1\|750384_751482_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	9.3e-74	43.0
WP_094079569.1\|752010_752991_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.3e-55	38.9
WP_094079570.1\|753044_753947_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.6e-74	51.0

DBSCAN-SWA_2

1065086 : 1073055

Fusobacterium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094079810.1\|1065086_1066019_-	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	1.3e-68	46.6
WP_094079811.1\|1066040_1067078_-	sel1 repeat family protein	NA	NA	NA	NA
WP_094079812.1\|1068963_1070319_-	recombinase family protein	A0A2I7SDG6	Paenibacillus_phage	5.4e-23	26.4
WP_094079813.1\|1070393_1070585_-	hypothetical protein	NA	NA	NA	NA
WP_094079814.1\|1070581_1070824_-	hypothetical protein	NA	NA	NA	NA
WP_094079815.1\|1070820_1071231_-	hypothetical protein	A0A0E3Y4X1	Fusobacterium_phage	8.9e-14	44.7
WP_094079816.1\|1071270_1071777_-	siphovirus Gp157 family protein	H9A0R4	Staphylococcus_phage	1.2e-07	35.9
WP_094079817.1\|1071814_1072195_-	single-stranded DNA-binding protein	A0A0S2MYK1	Enterococcus_phage	8.3e-22	51.0
WP_094079818.1\|1072196_1072784_-	ERF family protein	A0A0A8WJU6	Clostridium_phage	1.0e-23	37.4
WP_094079819.1\|1072788_1073055_-	hypothetical protein	A0A0E3U243	Fusobacterium_phage	2.4e-07	34.1

DBSCAN-SWA_3

1076869 : 1147625

Fusobacterium_phage(19.35%)

integrase,transposase,plate,tRNA,protease,terminase,capsid,portal,tail

attL 1105811:1105846|attR 1114042:1114077

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094079826.1\|1076869_1077295_+	ImmA/IrrE family metallo-endopeptidase	A0A0S2MV59	Bacillus_phage	3.9e-12	33.3
WP_094079827.1\|1077445_1077976_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_094079828.1\|1077977_1078793_+	hypothetical protein	NA	NA	NA	NA
WP_094079829.1\|1078933_1079167_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_094079830.1\|1079354_1079591_-	hypothetical protein	NA	NA	NA	NA
WP_156440367.1\|1079673_1079850_+	hypothetical protein	NA	NA	NA	NA
WP_094079831.1\|1080090_1080891_+	helix-turn-helix domain-containing protein	A0A1V0E018	Clostridioides_phage	8.7e-13	41.5
WP_094079832.1\|1080805_1081561_+	ATP-binding protein	A0A0A0RNN8	Bacillus_phage	6.9e-12	24.9
WP_094079833.1\|1081569_1081761_+	hypothetical protein	NA	NA	NA	NA
WP_094079834.1\|1081765_1081966_+	hypothetical protein	NA	NA	NA	NA
WP_094079835.1\|1081915_1082302_-	DUF2513 domain-containing protein	A0A1S5SCT1	Streptococcus_phage	6.9e-16	40.8
WP_094079836.1\|1082386_1082737_+	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	7.4e-09	41.2
WP_094079837.1\|1082737_1083253_+	dUTP diphosphatase	NA	NA	NA	NA
WP_155801913.1\|1083427_1083598_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0A8WHQ4	Clostridium_phage	1.7e-06	56.1
WP_094079838.1\|1083714_1084014_+	hypothetical protein	NA	NA	NA	NA
WP_094079839.1\|1084027_1084843_+	phage antirepressor KilAC domain-containing protein	A0A1Q1PVU2	Staphylococcus_phage	4.2e-55	44.8
WP_094079840.1\|1084844_1085084_+	hypothetical protein	NA	NA	NA	NA
WP_094079841.1\|1085282_1085774_+	DUF4065 domain-containing protein	M9QX37	Staphylococcus_phage	9.0e-29	42.6
WP_094079842.1\|1085773_1086154_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_157697352.1\|1086323_1086482_+	hypothetical protein	NA	NA	NA	NA
WP_094079843.1\|1086466_1087273_+	hypothetical protein	A0A0E3Y6J2	Fusobacterium_phage	6.5e-16	34.5
WP_094079844.1\|1087559_1087832_+	hypothetical protein	F8WQ63	Bacillus_phage	2.0e-09	40.2
WP_094079845.1\|1087832_1088054_+	hypothetical protein	NA	NA	NA	NA
WP_094079846.1\|1088101_1088293_+	hypothetical protein	NA	NA	NA	NA
WP_094079847.1\|1088389_1088689_+	hypothetical protein	NA	NA	NA	NA
WP_094079848.1\|1088853_1089426_+	MerR family transcriptional regulator	A0A2K9V2Q9	Faecalibacterium_phage	3.0e-07	25.3
WP_094079849.1\|1089379_1091236_+\|terminase	phage terminase large subunit family protein	A0A2K9V3X4	Faecalibacterium_phage	1.3e-149	45.7
WP_094080784.1\|1091273_1091468_+	hypothetical protein	A0A067ZJ01	Vibrio_phage	4.5e-08	46.9
WP_094079850.1\|1091488_1093066_+\|portal	phage portal protein	A0A0C5AJ48	Bacteriophage	8.8e-118	46.3
WP_094079851.1\|1093049_1094069_+\|protease	Clp protease ClpP	A0A067ZG37	Vibrio_phage	8.4e-53	40.6
WP_094079852.1\|1094071_1094401_+	hypothetical protein	NA	NA	NA	NA
WP_094079853.1\|1094403_1095444_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_094079854.1\|1095454_1095673_+	hypothetical protein	NA	NA	NA	NA
WP_094079855.1\|1095682_1096012_+	hypothetical protein	NA	NA	NA	NA
WP_094079856.1\|1096024_1096597_+	hypothetical protein	NA	NA	NA	NA
WP_094079857.1\|1096593_1097058_+	hypothetical protein	NA	NA	NA	NA
WP_018450284.1\|1097057_1097297_+	hypothetical protein	NA	NA	NA	NA
WP_172826463.1\|1097506_1097608_-	DUF1655 domain-containing protein	NA	NA	NA	NA
WP_172826464.1\|1097614_1098742_+\|tail	phage tail sheath protein	A0A0E3U251	Fusobacterium_phage	7.1e-45	34.2
WP_094079859.1\|1098755_1099283_+\|tail	phage major tail tube protein	A0A0E3Y6F4	Fusobacterium_phage	2.3e-06	25.3
WP_068154658.1\|1099293_1099623_+	hypothetical protein	NA	NA	NA	NA
WP_157697353.1\|1099640_1099796_+	hypothetical protein	NA	NA	NA	NA
WP_157697354.1\|1099806_1100013_-	hypothetical protein	NA	NA	NA	NA
WP_094079861.1\|1100076_1103154_+\|tail	phage tail tape measure protein	V9IQL1	Stenotrophomonas_phage	9.3e-55	36.1
WP_094079862.1\|1103153_1103375_+\|tail	tail protein X	NA	NA	NA	NA
WP_094079863.1\|1103377_1104241_+	hypothetical protein	A0A0C5AJ59	Bacteriophage	6.9e-24	29.9
WP_094079864.1\|1104250_1104802_+	hypothetical protein	NA	NA	NA	NA
WP_094079865.1\|1104934_1105711_+	hypothetical protein	NA	NA	NA	NA
1105811:1105846	attL	NA	NA	NA	NA
WP_094079866.1\|1105877_1106327_+\|plate	phage baseplate protein	NA	NA	NA	NA
WP_018450268.1\|1106323_1106854_+\|tail	phage tail protein	NA	NA	NA	NA
WP_094079867.1\|1106837_1107152_+	hypothetical protein	NA	NA	NA	NA
WP_094079868.1\|1107144_1108263_+\|plate	baseplate J/gp47 family protein	A0A0C5AEG2	Bacteriophage	9.2e-53	35.1
WP_094079869.1\|1108259_1108898_+\|tail	phage tail protein I	A0A088FVH1	Escherichia_phage	6.7e-08	33.3
WP_094079870.1\|1109856_1110132_-	hypothetical protein	NA	NA	NA	NA
WP_094079871.1\|1110181_1111135_+\|integrase	tyrosine-type recombinase/integrase	A0A0E3U2P3	Fusobacterium_phage	1.6e-74	45.8
WP_094079872.1\|1111371_1111938_+	hypothetical protein	NA	NA	NA	NA
WP_094079873.1\|1112028_1112547_+	N-acetylmuramidase	A0A1V0DYF6	Shewanella_phage	4.6e-23	40.2
WP_169720573.1\|1112730_1112904_+	hypothetical protein	A0A0E3U2Q1	Fusobacterium_phage	2.9e-06	54.5
WP_094079874.1\|1113016_1113316_+	hypothetical protein	NA	NA	NA	NA
WP_094079875.1\|1113328_1114030_+	Rha family transcriptional regulator	A0A0E3Y6H2	Fusobacterium_phage	1.1e-08	35.0
WP_094079876.1\|1114107_1114434_+	universal stress protein	NA	NA	NA	NA
1114042:1114077	attR	NA	NA	NA	NA
WP_068154687.1\|1114442_1114817_+	hypothetical protein	NA	NA	NA	NA
WP_094079877.1\|1114788_1115106_+	hypothetical protein	NA	NA	NA	NA
WP_157697355.1\|1115269_1115638_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_094079879.1\|1115700_1116300_+	hypothetical protein	F5A3D6	Riemerella_phage	3.3e-25	38.1
WP_157697356.1\|1116280_1116430_-	hypothetical protein	NA	NA	NA	NA
WP_094079880.1\|1116734_1117061_+	hypothetical protein	NA	NA	NA	NA
WP_094079881.1\|1117098_1117845_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-32	40.3
WP_094079882.1\|1117844_1119416_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_094079883.1\|1119424_1120426_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_094079884.1\|1120661_1121759_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q332I1	Clostridium_botulinum_C_phage	6.9e-61	41.8
WP_094079885.1\|1121763_1122162_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	9.5e-37	55.8
WP_094079886.1\|1122832_1123357_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_094079887.1\|1123948_1125046_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	6.4e-75	43.8
WP_094079888.1\|1125293_1125587_+	hypothetical protein	NA	NA	NA	NA
WP_094079889.1\|1125583_1126099_+	hypothetical protein	NA	NA	NA	NA
WP_157697357.1\|1126500_1127769_+	hypothetical protein	NA	NA	NA	NA
WP_018497864.1\|1127749_1128019_+	hypothetical protein	NA	NA	NA	NA
WP_157697358.1\|1128593_1128893_+	hypothetical protein	NA	NA	NA	NA
WP_094079893.1\|1128901_1129309_+	hypothetical protein	NA	NA	NA	NA
WP_094079894.1\|1129423_1130149_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_094079895.1\|1130967_1132281_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_094079896.1\|1132339_1132810_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_094079897.1\|1132930_1133668_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_094080785.1\|1133925_1134882_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_094079898.1\|1134939_1135611_-	hypothetical protein	NA	NA	NA	NA
WP_094079899.1\|1135779_1136793_+	YiiG family protein	NA	NA	NA	NA
WP_094079900.1\|1142093_1143173_+	peptide chain release factor 1	NA	NA	NA	NA
WP_094079901.1\|1143165_1144269_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_094079902.1\|1144362_1145367_+	hypothetical protein	NA	NA	NA	NA
WP_094079903.1\|1145446_1145749_+\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
WP_094079904.1\|1146377_1147625_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1L2BWW3	Bacteriophage	6.6e-60	38.4

DBSCAN-SWA_4

1438304 : 1444679

Clostridium_phage(28.57%)

integrase

attL 1434364:1434380|attR 1443673:1443689

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1434364:1434380	attL	NA	NA	NA	NA
WP_094080143.1\|1438304_1439354_-\|integrase	site-specific integrase	A0A0A8WF08	Clostridium_phage	4.0e-82	47.8
WP_094080144.1\|1439359_1439536_-	transcriptional regulator	A0A0S2MV91	Bacillus_phage	1.6e-07	49.1
WP_094080145.1\|1439714_1440182_-	hypothetical protein	A0A0A7RUP7	Clostridium_phage	4.4e-09	32.5
WP_094080146.1\|1440178_1440367_-	hypothetical protein	NA	NA	NA	NA
WP_094080147.1\|1440408_1441131_-	phage recombination protein Bet	A0A1P8BLR4	Lactococcus_phage	9.2e-38	46.4
WP_094080148.1\|1441143_1442064_-	DUF1351 domain-containing protein	NA	NA	NA	NA
WP_094080149.1\|1442072_1442720_-	YqaJ viral recombinase family protein	A0A0P0IJW5	Lactobacillus_phage	3.0e-16	33.6
WP_094080150.1\|1442738_1443014_-	hypothetical protein	A0A0E3U243	Fusobacterium_phage	6.4e-08	36.4
WP_094080151.1\|1443015_1443783_-	hypothetical protein	NA	NA	NA	NA
1443673:1443689	attR	NA	NA	NA	NA
WP_094080152.1\|1443792_1443990_-	hypothetical protein	NA	NA	NA	NA
WP_094080153.1\|1443998_1444679_-	Rha family transcriptional regulator	A0A0P0IDD0	Lactobacillus_phage	2.8e-12	27.7

DBSCAN-SWA_5

1450805 : 1480004

Fusobacterium_phage(18.75%)

integrase,plate,terminase,capsid,tail

attL 1447294:1447309|attR 1486957:1486972

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1447294:1447309	attL	NA	NA	NA	NA
WP_094080164.1\|1450805_1451606_+	helix-turn-helix domain-containing protein	A0A1V0E018	Clostridioides_phage	8.7e-13	41.5
WP_094080165.1\|1451520_1452276_+	ATP-binding protein	A0A0A0RNN8	Bacillus_phage	1.5e-11	24.9
WP_094080166.1\|1452284_1452476_+	hypothetical protein	NA	NA	NA	NA
WP_094080167.1\|1452472_1452823_+	RusA family crossover junction endodeoxyribonuclease	A0A0E3U267	Fusobacterium_phage	5.8e-14	38.3
WP_094080168.1\|1452822_1453047_+	hypothetical protein	NA	NA	NA	NA
WP_094080169.1\|1453046_1453517_+	nucleoside triphosphate pyrophosphohydrolase family protein	E3SMH7	Cyanophage	6.4e-08	69.8
WP_068154623.1\|1453571_1454186_+	ORF6C domain-containing protein	A0A288WFT2	Bacillus_phage	1.3e-16	33.9
WP_094080171.1\|1454355_1454847_+	DUF4065 domain-containing protein	A8ATC0	Listeria_phage	6.3e-30	41.2
WP_094080172.1\|1454846_1455227_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_157697368.1\|1455395_1455554_+	hypothetical protein	NA	NA	NA	NA
WP_094080173.1\|1455538_1456348_+	hypothetical protein	A0A0E3Y6J2	Fusobacterium_phage	1.2e-14	30.9
WP_094080174.1\|1456349_1456556_+	hypothetical protein	NA	NA	NA	NA
WP_094080175.1\|1456607_1456856_+	DUF3850 domain-containing protein	J9QD24	Clostridium_phage	8.6e-12	49.3
WP_094080176.1\|1456878_1457109_+	hypothetical protein	NA	NA	NA	NA
WP_094080177.1\|1457198_1457819_+	hypothetical protein	NA	NA	NA	NA
WP_094080178.1\|1457892_1458420_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_094080179.1\|1458641_1459043_+\|terminase	terminase small subunit	Q9AZ67	Lactococcus_phage	4.8e-12	40.2
WP_094080180.1\|1459044_1460487_+\|terminase	phage terminase large subunit	A0A2H4J7G6	uncultured_Caudovirales_phage	3.5e-73	35.1
WP_094080181.1\|1460499_1463268_+	DUF935 family protein	B7SDN5	Haemophilus_phage	5.5e-14	29.9
WP_094080182.1\|1463260_1463608_+	hypothetical protein	NA	NA	NA	NA
WP_157697370.1\|1463632_1463824_+	hypothetical protein	NA	NA	NA	NA
WP_157697371.1\|1463920_1464400_+	phage virion morphogenesis protein	A0A219VH84	Ochrobactrum_phage	3.1e-10	32.4
WP_094080185.1\|1464470_1465436_+	hypothetical protein	NA	NA	NA	NA
WP_094080186.1\|1465448_1465826_+	hypothetical protein	NA	NA	NA	NA
WP_060917196.1\|1465844_1466849_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_094080187.1\|1466862_1467285_+	hypothetical protein	NA	NA	NA	NA
WP_094080188.1\|1467296_1467761_+	hypothetical protein	NA	NA	NA	NA
WP_094080189.1\|1467760_1468894_+	hypothetical protein	NA	NA	NA	NA
WP_094080190.1\|1468911_1469340_+	hypothetical protein	A0A090DCP2	Clostridium_phage	2.8e-10	35.5
WP_094080191.1\|1469359_1469812_+	hypothetical protein	NA	NA	NA	NA
WP_157697372.1\|1469856_1470009_+	hypothetical protein	NA	NA	NA	NA
WP_094080192.1\|1469998_1472212_+\|tail	phage tail tape measure protein	A0A1L6BY19	Clostridium_phage	1.2e-43	41.1
WP_094080193.1\|1472274_1472676_+	hypothetical protein	NA	NA	NA	NA
WP_094080194.1\|1472679_1473408_+	hypothetical protein	NA	NA	NA	NA
WP_094080195.1\|1473388_1474318_+	hypothetical protein	NA	NA	NA	NA
WP_094080196.1\|1474317_1474716_+	hypothetical protein	NA	NA	NA	NA
WP_157697374.1\|1474721_1475186_+	DUF2577 family protein	NA	NA	NA	NA
WP_094080198.1\|1475187_1475667_+	DUF2634 domain-containing protein	NA	NA	NA	NA
WP_094080199.1\|1475685_1476783_+\|plate	baseplate J/gp47 family protein	A0A2H4J7K8	uncultured_Caudovirales_phage	3.8e-11	24.4
WP_094080200.1\|1476798_1477185_+	hypothetical protein	NA	NA	NA	NA
WP_094080201.1\|1477184_1477994_+	hypothetical protein	NA	NA	NA	NA
WP_094080202.1\|1478009_1478732_+	hypothetical protein	NA	NA	NA	NA
WP_094080203.1\|1479050_1480004_+\|integrase	tyrosine-type recombinase/integrase	A0A0E3U2P3	Fusobacterium_phage	8.0e-74	45.5
1486957:1486972	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1504343 : 1515760

Synechococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094080221.1\|1504343_1508156_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	2.1e-32	24.5
WP_094080222.1\|1508176_1508656_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.4e-29	46.2
WP_094080223.1\|1508816_1509536_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	2.9e-44	43.9
WP_094080224.1\|1509714_1511166_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.5e-52	33.5
WP_094080225.1\|1511190_1511478_+	GTP cyclohydrolase	NA	NA	NA	NA
WP_094080226.1\|1511511_1512510_+	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	1.2e-59	40.4
WP_094080800.1\|1512550_1513144_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-21	36.5
WP_172826467.1\|1513171_1513327_+	hypothetical protein	NA	NA	NA	NA
WP_094080227.1\|1513617_1514166_+	hypothetical protein	NA	NA	NA	NA
WP_094080228.1\|1514236_1515760_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.2e-72	50.2

Anti-CRISPR protein detection

Acr_ID: NZ_CP016753.1|WP_021743948.1|196783_197359_+|hypothetical-protein

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Acr_ID: NZ_CP016753.1|WP_094080163.1|1450457_1450697_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP016753.1|WP_021743948.1|196783_197359_+|hypothetical-protein

196783_197359_+

191 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|89	0.46113989637305697	0.9895287958115183	0.9948186528497409

NZ_CP016753.1|WP_094080163.1|1450457_1450697_+|hypothetical-protein

1450457_1450697_+

79 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|82	0.9746835443037974	1	1.0

HTH_36

Identity	Hit_domain_coverage
NA	NA

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016753

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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