CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP020493	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence	0 crisprs	NA	0	0	2
NZ_CP020494	Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-2, complete sequence	0 crisprs	DEDDh	0	0	0
NZ_CP020492	Salmonella enterica subsp. enterica strain 08-00436, complete genome	2 crisprs	DEDDh,TnsE_C,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK	1	28	9

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

94020 : 138763

Erysipelothrix_phage(16.67%)

integrase,transposase

attL 130326:130339|attR 136014:136027

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012478345.1\|94020_94995_-\|transposase	IS30-like element ISApl1 family transposase	W5R8L2	Staphylococcus_phage	2.3e-52	39.1
WP_001043843.1\|95080_95506_+	hypothetical protein	NA	NA	NA	NA
WP_001572440.1\|96250_96550_+	hypothetical protein	NA	NA	NA	NA
WP_123872853.1\|96539_96860_+	hypothetical protein	NA	NA	NA	NA
WP_032192809.1\|96862_98902_-	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	2.5e-24	24.8
WP_001572342.1\|98898_99885_-	hypothetical protein	NA	NA	NA	NA
WP_001194555.1\|100915_101119_+	hypothetical protein	NA	NA	NA	NA
WP_001287392.1\|101460_101865_-	H-NS histone family protein	NA	NA	NA	NA
WP_000175476.1\|102362_102599_-	hypothetical protein	NA	NA	NA	NA
WP_001572344.1\|102640_103096_-	hypothetical protein	NA	NA	NA	NA
WP_000490638.1\|103155_103821_-	hypothetical protein	NA	NA	NA	NA
WP_001426317.1\|103878_104259_-	hypothetical protein	NA	NA	NA	NA
WP_000193209.1\|104901_105720_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_001572381.1\|105716_106922_+	hypothetical protein	NA	NA	NA	NA
WP_000078514.1\|107201_108521_-	DUF1173 family protein	NA	NA	NA	NA
WP_000833382.1\|108771_110199_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
WP_001572389.1\|110413_110929_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
WP_065203147.1\|110931_111828_+	hypothetical protein	NA	NA	NA	NA
WP_015059496.1\|112049_112283_+	hypothetical protein	NA	NA	NA	NA
WP_001572393.1\|112944_113175_+	hypothetical protein	NA	NA	NA	NA
WP_000185304.1\|113511_113973_+	hypothetical protein	NA	NA	NA	NA
WP_000074418.1\|114002_114410_+	hypothetical protein	NA	NA	NA	NA
WP_029698059.1\|114460_114778_-	hypothetical protein	NA	NA	NA	NA
WP_031613424.1\|115154_115505_-	hypothetical protein	NA	NA	NA	NA
WP_001351729.1\|117369_117762_+	cysteine hydrolase	NA	NA	NA	NA
WP_000058717.1\|117899_118784_+	EamA family transporter	NA	NA	NA	NA
WP_000804064.1\|118815_120015_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_000470728.1\|120093_120771_+	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_000844627.1\|120802_121045_-\|transposase	transposase	NA	NA	NA	NA
WP_000429836.1\|121831_122266_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294663.1\|122337_122688_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_000732292.1\|122701_122977_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001340589.1\|123012_123435_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000105636.1\|123486_125181_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001277456.1\|125198_125561_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_046644968.1\|125557_125794_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000204520.1\|125790_126498_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000935451.1\|126536_128252_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000376623.1\|128812_129313_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|129440_130280_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|130273_130621_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
130326:130339	attL	NA	NA	NA	NA
WP_001206317.1\|130784_131576_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000777555.1\|131668_132142_-	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
WP_000845049.1\|132298_133417_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.5e-71	45.7
WP_000480968.1\|133388_134225_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|134224_135028_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_085959879.1\|135134_136264_-\|transposase	IS3-like element IS1133 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-52	41.1
136014:136027	attR	NA	NA	NA	NA
WP_001067855.1\|136737_137442_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011264039.1\|137514_137754_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_000612791.1\|137899_138763_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0

DBSCAN-SWA_2

146954 : 173413

Escherichia_phage(21.43%)

integrase,transposase

attL 137981:137995|attR 162997:163011

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
137981:137995	attL	NA	NA	NA	NA
WP_000845048.1\|146954_147968_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001067855.1\|148470_149175_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|149930_150782_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|151089_151905_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	3.5e-09	27.6
WP_001082319.1\|151965_152769_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|152768_153605_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_000018321.1\|153940_154756_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.8e-160	98.2
WP_001201005.1\|154909_155785_-	acyl-CoA--6-aminopenicillanic acid acyl-transferase	NA	NA	NA	NA
WP_001138082.1\|155854_158740_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.1e-190	39.9
WP_000904906.1\|158865_159480_+	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-37	48.6
WP_085947932.1\|159998_160758_+\|transposase	IS5-like element ISKpn12 family transposase	A0A0N9SJT9	Paenibacillus_phage	2.0e-11	38.8
WP_004197549.1\|161650_161836_+	hypothetical protein	NA	NA	NA	NA
WP_094078623.1\|161901_163061_-\|transposase	IS3-like element ISKpn11 family transposase	A0A2P1JR32	Mycobacterium_phage	3.4e-18	31.8
162997:163011	attR	NA	NA	NA	NA
WP_040234282.1\|163286_163478_-	hypothetical protein	NA	NA	NA	NA
WP_002063889.1\|164059_164602_-	AAA family ATPase	NA	NA	NA	NA
WP_000557452.1\|164614_165475_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_000027057.1\|165551_166412_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067855.1\|166653_167358_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000147567.1\|167657_168218_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_001138064.1\|168220_171187_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000656305.1\|171253_171631_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_071528359.1\|171831_172314_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	4.6e-94	99.4
WP_012478345.1\|172438_173413_+\|transposase	IS30-like element ISApl1 family transposase	W5R8L2	Staphylococcus_phage	2.3e-52	39.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP020492

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020492_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020492_1

3021149-3022642

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

24 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP020492_1

>merge|NZ_CP020492|1|3021149-3022642|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGCTGACGCGGGGAACACGATTTTTCGCCAGCCACTCCAGCCAGTGCTGCCGGTTTATCCCCGCTGGCGCGGGGAACACTAGCAATGGAAATATTTGCATGGATAGTTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACTATGAAACGCTCCCTCACCGAGCAGCGGCAAACGGTTTATCCCCGCTGGCGCGGGGAACACCCAGCCAGTAGTGGGAAAATGTCACTCTCGGTCGGTTTATCCCCGCTGGCGCGGGGAACACGTCCACCGATAAAAACGGGCGTTGCCGCACAACGGTTTATCCCCGCTGGCGCGGGGAACACCGGGGCATCAATACGCGCAACCGGGTAGCCCTCGGTTTATCCCCGCTGGCGCGGGGAACACAGCTCAGGCCCGCACCGAAACAACGCTCGATACGGTTTATCCCCGCTGGCGCGGGGAACACAACACGGCGGCAATATCGCGCCCCTGACTGGGCGGTTTATCCCCGCTGGCGCGGGGAACACCGCAACCGCTAGATGACCGACAACGAGAATGGCGGTTTATCCCCGCTGGCGCGGGGAACACAACAACAGAGCAGATCCTGAAGTATGACCGCGCGGTTTATCCCCGCTGGCGCGGGGAACACATATTCGTCGTTAATACCAGTGCATTCAAATTCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCTACGTCACCGATCGAGATCAGGCCGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCAGACACGTCTGCAAAACAGACTCGTTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGGACAATAGCTATCTCGACAGTGAAACGTTGCGGTTTATCCCCGCTGACGCGGGGAACACAAAAGGCCAGCCGAGGTCTTCGGAAACATACCCGGTTTATCCCCGCTGGCGCGGGGAACACACTCAAAAGGCCAGTACCAAGGCGGCGCTCACCGGTTTATCCCCGCTGGCGCGGGGAACACTCGTGAATCGTAGCGCTTCCCCACTAGCAAGGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGTTGATGATTTTGTTATTCGCCCTCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACACCGTGTTCGGCTTCTTCAACGTCGTCTTTATCCCGGTTTATCCCCGCTGGCGCGGGGAACACCCGGCGGTCGACATCGAGCAGGAATTTCGAAACGGTTTATCCCCGCTGGCGCGGGGAACACTTAAAAGTTTTATCGCCGTAGCCTATTGCTAACGGTTTATCCCCGCTGGCGCGGGGAACACCGTATAAATATTGAGTAATACCGCCGACCGGCCGGTTTATCCCCGCTGGCGCGGGGAACACTCGGGCGCTCAAAACCGCAAACAGACGGCGGGCGGTTTATCCCCGCTGGCGCGGGGAACACGCCTTCCTGTAATTCAGCATACTTCGACGTACCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020492|1|1|3021149-3022642|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAACAC	GATTTTTCGCCAGCCACTCCAGCCAGTGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGCAATGGAAATATTTGCATGGATAGTTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATGAAACGCTCCCTCACCGAGCAGCGGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGCCAGTAGTGGGAAAATGTCACTCTCGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCCACCGATAAAAACGGGCGTTGCCGCACAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGGGCATCAATACGCGCAACCGGGTAGCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCTCAGGCCCGCACCGAAACAACGCTCGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACACGGCGGCAATATCGCGCCCCTGACTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCAACCGCTAGATGACCGACAACGAGAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACAACAGAGCAGATCCTGAAGTATGACCGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTCGTCGTTAATACCAGTGCATTCAAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCTACGTCACCGATCGAGATCAGGCCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCAGACACGTCTGCAAAACAGACTCGTTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGACAATAGCTATCTCGACAGTGAAACGTTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAAGGCCAGCCGAGGTCTTCGGAAACATACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTCAAAAGGCCAGTACCAAGGCGGCGCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTGAATCGTAGCGCTTCCCCACTAGCAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTTGATGATTTTGTTATTCGCCCTCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTGTTCGGCTTCTTCAACGTCGTCTTTATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGCGGTCGACATCGAGCAGGAATTTCGAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTAAAAGTTTTATCGCCGTAGCCTATTGCTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATAAATATTGAGTAATACCGCCGACCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGGGCGCTCAAAACCGCAAACAGACGGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTTCCTGTAATTCAGCATACTTCGACGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020492|1|1|3021149-3022642|CRT
GTGTTTATCCCCGCTGACGCGGGGAACAC	GATTTTTCGCCAGCCACTCCAGCCAGTGCTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGCAATGGAAATATTTGCATGGATAGTTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATGAAACGCTCCCTCACCGAGCAGCGGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCAGCCAGTAGTGGGAAAATGTCACTCTCGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCCACCGATAAAAACGGGCGTTGCCGCACAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGGGCATCAATACGCGCAACCGGGTAGCCCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCTCAGGCCCGCACCGAAACAACGCTCGATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACACGGCGGCAATATCGCGCCCCTGACTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGCAACCGCTAGATGACCGACAACGAGAATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACAACAGAGCAGATCCTGAAGTATGACCGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTCGTCGTTAATACCAGTGCATTCAAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCTACGTCACCGATCGAGATCAGGCCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCAGACACGTCTGCAAAACAGACTCGTTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGGACAATAGCTATCTCGACAGTGAAACGTTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	AAAAGGCCAGCCGAGGTCTTCGGAAACATACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTCAAAAGGCCAGTACCAAGGCGGCGCTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTGAATCGTAGCGCTTCCCCACTAGCAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTTGATGATTTTGTTATTCGCCCTCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTGTTCGGCTTCTTCAACGTCGTCTTTATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGCGGTCGACATCGAGCAGGAATTTCGAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTAAAAGTTTTATCGCCGTAGCCTATTGCTAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATAAATATTGAGTAATACCGCCGACCGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGGGCGCTCAAAACCGCAAACAGACGGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCTTCCTGTAATTCAGCATACTTCGACGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020492|1|1|3021151-3022642|PILER-CR
GTTTATCCCCGCTGACGCGGGGAACACGA	TTTTTCGCCAGCCACTCCAGCCAGTGCTGCCG
GTTTATCCCCGCTGGCGCGGGGAACACTA	GCAATGGAAATATTTGCATGGATAGTTGCGCG
GTTTATCCCCGCTGGCGCGGGGAACACTA	TGAAACGCTCCCTCACCGAGCAGCGGCAAACG
GTTTATCCCCGCTGGCGCGGGGAACACCC	AGCCAGTAGTGGGAAAATGTCACTCTCGGTCG
GTTTATCCCCGCTGGCGCGGGGAACACGT	CCACCGATAAAAACGGGCGTTGCCGCACAACG
GTTTATCCCCGCTGGCGCGGGGAACACCG	GGGCATCAATACGCGCAACCGGGTAGCCCTCG
GTTTATCCCCGCTGGCGCGGGGAACACAG	CTCAGGCCCGCACCGAAACAACGCTCGATACG
GTTTATCCCCGCTGGCGCGGGGAACACAA	CACGGCGGCAATATCGCGCCCCTGACTGGGCG
GTTTATCCCCGCTGGCGCGGGGAACACCG	CAACCGCTAGATGACCGACAACGAGAATGGCG
GTTTATCCCCGCTGGCGCGGGGAACACAA	CAACAGAGCAGATCCTGAAGTATGACCGCGCG
GTTTATCCCCGCTGGCGCGGGGAACACAT	ATTCGTCGTTAATACCAGTGCATTCAAATTCG
GTTTATCCCCGCTGGCGCGGGGAACACTG	CCTACGTCACCGATCGAGATCAGGCCGGGGCG
GTTTATCCCCGCTGGCGCGGGGAACACTC	CAGACACGTCTGCAAAACAGACTCGTTTGCCG
GTTTATCCCCGCTGGCGCGGGGAACACGC	GGACAATAGCTATCTCGACAGTGAAACGTTGCG
GTTTATCCCCGCTGACGCGGGGAACACAA	AAGGCCAGCCGAGGTCTTCGGAAACATACCCG
GTTTATCCCCGCTGGCGCGGGGAACACAC	TCAAAAGGCCAGTACCAAGGCGGCGCTCACCG
GTTTATCCCCGCTGGCGCGGGGAACACTC	GTGAATCGTAGCGCTTCCCCACTAGCAAGGCG
GTTTATCCCCGCTGGCGCGGGGAACACTG	GTTGATGATTTTGTTATTCGCCCTCAGCAGCG
GTTTATCCCCGCTGGCGCGGGGAACACCG	TGTTCGGCTTCTTCAACGTCGTCTTTATCCCG
GTTTATCCCCGCTGGCGCGGGGAACACCC	GGCGGTCGACATCGAGCAGGAATTTCGAAACG
GTTTATCCCCGCTGGCGCGGGGAACACTT	AAAAGTTTTATCGCCGTAGCCTATTGCTAACG
GTTTATCCCCGCTGGCGCGGGGAACACCG	TATAAATATTGAGTAATACCGCCGACCGGCCG
GTTTATCCCCGCTGGCGCGGGGAACACTC	GGGCGCTCAAAACCGCAAACAGACGGCGGGCG
GTTTATCCCCGCTGGCGCGGGGAACACGC	CTTCCTGTAATTCAGCATACTTCGACGTACCG
GTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020492.1\|WP_053444910.1\|3028910_3031559_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP020492.1\|WP_053444844.1\|3020087_3021134_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP020492.1\|WP_053444840.1\|3026406_3026943_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP020492.1\|WP_053444838.1\|3031816_3032551_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP020492.1\|WP_001173663.1\|3016887_3017493_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP020492.1\|WP_053444841.1\|3025337_3026393_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP020492.1\|WP_000144830.1\|3023031_3023952_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP020492.1\|WP_000372384.1\|3018928_3019837_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP020492.1\|WP_001221538.1\|3013015_3013777_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP020492.1\|WP_053444837.1\|3032626_3034339_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP020492.1\|WP_000517480.1\|3016011_3016323_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP020492.1\|WP_053444839.1\|3026939_3028490_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP020492.1\|WP_000134246.1\|3013757_3014807_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP020492.1\|WP_020839118.1\|3015282_3015993_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP020492.1\|WP_001219245.1\|3014803_3015283_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP020492.1\|WP_001518648.1\|3022738_3023032_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP020492.1\|WP_053444842.1\|3024580_3025327_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP020492.1\|WP_053444843.1\|3023948_3024599_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP020492.1\|WP_001092269.1\|3017479_3018919_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP020492.1\|WP_001118110.1\|3016513_3016870_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
NZ_CP020492.1\|WP_053444910.1\|3028910_3031559_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.41889e-167
NZ_CP020492.1\|WP_053444844.1\|3020087_3021134_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP020492.1\|WP_053444840.1\|3026406_3026943_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.06891e-24
NZ_CP020492.1\|WP_053444838.1\|3031816_3032551_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.48984e-138
NZ_CP020492.1\|WP_001173663.1\|3016887_3017493_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP020492.1\|WP_053444841.1\|3025337_3026393_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.10143e-137
NZ_CP020492.1\|WP_000144830.1\|3023031_3023952_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.63116e-157
NZ_CP020492.1\|WP_000372384.1\|3018928_3019837_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP020492.1\|WP_001221538.1\|3013015_3013777_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP020492.1\|WP_053444837.1\|3032626_3034339_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP020492.1\|WP_000517480.1\|3016011_3016323_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP020492.1\|WP_053444839.1\|3026939_3028490_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP020492.1\|WP_000134246.1\|3013757_3014807_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP020492.1\|WP_020839118.1\|3015282_3015993_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.27466e-119
NZ_CP020492.1\|WP_001219245.1\|3014803_3015283_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP020492.1\|WP_001518648.1\|3022738_3023032_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP020492.1\|WP_053444842.1\|3024580_3025327_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.19412e-48
NZ_CP020492.1\|WP_053444843.1\|3023948_3024599_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.87095e-75
NZ_CP020492.1\|WP_001092269.1\|3017479_3018919_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP020492.1\|WP_001118110.1\|3016513_3016870_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	9.96163e-49

>NZ_CP020492.1|WP_053444844.1|3020087_3021134_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPRPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP020492.1|WP_000372384.1|3018928_3019837_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP020492.1|WP_001092269.1|3017479_3018919_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP020492.1|WP_001173663.1|3016887_3017493_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP020492.1|WP_001118110.1|3016513_3016870_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLVVGALFGALFIWLLG
>NZ_CP020492.1|WP_000517480.1|3016011_3016323_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP020492.1|WP_020839118.1|3015282_3015993_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP020492.1|WP_001219245.1|3014803_3015283_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP020492.1|WP_000134246.1|3013757_3014807_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP020492.1|WP_001221538.1|3013015_3013777_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP020492.1|WP_001518648.1|3022738_3023032_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP020492.1|WP_000144830.1|3023031_3023952_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP020492.1|WP_053444843.1|3023948_3024599_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP020492.1|WP_053444842.1|3024580_3025327_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNHHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRQYQDKFNALKLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP020492.1|WP_053444841.1|3025337_3026393_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRTGRIAREAAQILIDSGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEAVKALAHLLAEEKRAPKDEELALLRKDRMAVDIAMFGRMLANKPEYNIEAACQVAHAFGVSETIVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRINALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA
>NZ_CP020492.1|WP_053444840.1|3026406_3026943_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSVTVNDACLSEGFRSLLMQTHTLWKIDGQEWRVTALALTAALAANVKAIDERQKFAAQLNDVMSELRFTRLCAVKTPDELLRQLRRAVKLSNGAVNLFSLAEDIFCWCREQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDTDNEQD
>NZ_CP020492.1|WP_053444839.1|3026939_3028490_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MGSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADTLHKALAPLEHAFQFGPESPSFMQDFEPLNGEKISIGSLLPETPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQRDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFTTLQSGYCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQDNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRRYFDDHVFTNPYESSDLKRIMTARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP020492.1|WP_053444910.1|3028910_3031559_-|CRISPR-associated-helicase/endonuclease-Cas3
MAMFNYWGKTCRGEKDGGDDYHLLCWHSLDVAAMGYEMVKRNLYGLADYFRQLGIAEIEPAAQFFAWLLCWHDTGKFASSFQQRYSHPDLHVPAERRQNYEPIPHATLGYGLWNSWLGECPELLPDSTLPPRKLKRVIAMWMPLVTGHHGHPPKGLGEFNHFLQQDKDAAREFLTSIKALFPLIEIPAFWDEDDGIELFQRLSWLISATVVLADWTGSSTRYFPRIARAMPIDAYWQQAQEKAQAALTIFPPSSTVAPFSGVNTLFPFIRQPTPLQQKVLELEVNNAGPQLFILEDVTGAGKTEAALILTHRLMAAGKAQGLFFGLPTMATANAMFDRLAKSWLALYESASRPSLVLAHSARGLMDRFNQSLWSGDLSGSEEPDEKQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHAYDAYMSRILESLIENQARNGNTTILLSATLSQQQRDRLVAAFARGTKSNMEAPLLGLDNYPWLTQVTSEDVVSQHVATRKEVERSVNVGWLYSESDCIERIEQAVKQGQCVAWIRNSVDDAIRIYRQLITRGVIPAENLSLFHSRFAFYDRQRIETETLLRFGKDESSQRAGKVLIATQVIEQSLDADMDVMISDLAPVDLLIQRAGRLQRHIRDRNGQLKESGPDERDKPELLVLAPEWTDEPREDWFSSAMRNSAYVYPDHGRLWLTQRVLREQGAIRMPQSARLLIESVYGDNVAMPDGFTKSGQQQEGKLHCDRAFAYQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVIPYASGEHAWEMSVLRVRQSWWNKHKDEFERLDGEPLRKWCVEQHQDKDFALVIAVTDFAACGYSENEGLIGKFE
>NZ_CP020492.1|WP_053444838.1|3031816_3032551_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAEANAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGRLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP020492.1|WP_053444837.1|3032626_3034339_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDQLIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE

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Crispr_ID: NZ_CP020492_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020492_2

3037920-3039047

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

18 spacers

cas3,cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of NZ_CP020492_2

>merge|NZ_CP020492|2|3037920-3039047|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACTCGTAGTCTTCCGGGTAGGCGTTTTCATCCGGCGGTTTATCCCCGCTAGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCCGCTGGCGCGGGGAACACTCAGCCTCAAACCGGATGTAACGCGCTAACGCCGGTTTATCCCCGCTGGCGCGGGGAACACACGGGTGAGCGCTGCCGGGGTGGTAATCCTTCCGGTTTATCCCCGCTGACGCGGGGAACACGTAACTTAATAAGGTCCTGGACATTAATTTTGCGGTTTATCCCCGCTGACGCGGGGAACACCCGCTGACTGAAAATGACGACGTACCGGAAGGCTGGTTTATCCCCGCTGGCGCGGGGAACACGTTATGATTTGTATTGTAATATAATTAACGAACGGTTTATCCCCGCTGGCGCGGGGAACACTGAGTGGATATTAAACGGACCTTACAGCCCCACGGTTTATCCTCGCTGGCGCGGGGAACACGGAAGGAAGCTAAGCAAGCCCTTCTCTCAATCCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCAATATGCTCTGGATCGTCATGATCACCCCGGTTTATCCCCGCTGGCGCGGGGAACACATTGTGTCTCATGAGAATCATCAACCTGAGCCCGGTTTATCTCCGCTGGCGCGGGGAACACTTCCGTATCGAGACCACTGATCGCTTCCGCTGCGGTTTATCCCCGCTGGCGCGGGGAACACGTCTCCCCCCTGAGTAACTCCTTTCGATAATTCGGTTTATCCCCGCTGGCGCGGGGAACACCATTTTTGTATTTGTTTCTATGGCGGATCATACGGTTTATCCCCGCTGGCGCGGGGAACACTAAGCGCGAAATTGAAAGGGGATCAGAAGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTTGTCCGGCGTTAAAACAAGTTTGCCGATCCCGGTTTATCCCCGCTGGCGCGGGGAACACGATAAAACAAACCAGGCGGCAGCAGATGAATACGGTTTATCCCCGCTGGCGCGGGGAACACATGCGGATTGAAAATCCGTTTTCGGCCAGCGTCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020492|2|2|3037920-3039047|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	TCGTAGTCTTCCGGGTAGGCGTTTTCATCCGG
CGGTTTATCCCCGCTAGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAGCCTCAAACCGGATGTAACGCGCTAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGGGTGAGCGCTGCCGGGGTGGTAATCCTTC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GTAACTTAATAAGGTCCTGGACATTAATTTTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	CCGCTGACTGAAAATGACGACGTACCGGAAGGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTATGATTTGTATTGTAATATAATTAACGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGTGGATATTAAACGGACCTTACAGCCCCA
CGGTTTATCCTCGCTGGCGCGGGGAACAC	GGAAGGAAGCTAAGCAAGCCCTTCTCTCAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCAATATGCTCTGGATCGTCATGATCACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTGTGTCTCATGAGAATCATCAACCTGAGCC
CGGTTTATCTCCGCTGGCGCGGGGAACAC	TTCCGTATCGAGACCACTGATCGCTTCCGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTCCCCCCTGAGTAACTCCTTTCGATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTTTTGTATTTGTTTCTATGGCGGATCATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAGCGCGAAATTGAAAGGGGATCAGAAGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGTCCGGCGTTAAAACAAGTTTGCCGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAAACAAACCAGGCGGCAGCAGATGAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGCGGATTGAAAATCCGTTTTCGGCCAGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020492|2|2|3037920-3039047|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	TCGTAGTCTTCCGGGTAGGCGTTTTCATCCGG
CGGTTTATCCCCGCTAGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAGCCTCAAACCGGATGTAACGCGCTAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGGGTGAGCGCTGCCGGGGTGGTAATCCTTC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GTAACTTAATAAGGTCCTGGACATTAATTTTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	CCGCTGACTGAAAATGACGACGTACCGGAAGGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTATGATTTGTATTGTAATATAATTAACGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGTGGATATTAAACGGACCTTACAGCCCCA
CGGTTTATCCTCGCTGGCGCGGGGAACAC	GGAAGGAAGCTAAGCAAGCCCTTCTCTCAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCAATATGCTCTGGATCGTCATGATCACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTGTGTCTCATGAGAATCATCAACCTGAGCC
CGGTTTATCTCCGCTGGCGCGGGGAACAC	TTCCGTATCGAGACCACTGATCGCTTCCGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTCCCCCCTGAGTAACTCCTTTCGATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTTTTGTATTTGTTTCTATGGCGGATCATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAGCGCGAAATTGAAAGGGGATCAGAAGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGTCCGGCGTTAAAACAAGTTTGCCGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAAACAAACCAGGCGGCAGCAGATGAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGCGGATTGAAAATCCGTTTTCGGCCAGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP020492|2|2|3037981-3039047|PILER-CR
CGGTTTATCCCCGCTAGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCAGCCTCAAACCGGATGTAACGCGCTAACGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACGGGTGAGCGCTGCCGGGGTGGTAATCCTTC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GTAACTTAATAAGGTCCTGGACATTAATTTTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	CCGCTGACTGAAAATGACGACGTACCGGAAGGC
TGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTATGATTTGTATTGTAATATAATTAACGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGAGTGGATATTAAACGGACCTTACAGCCCCA
CGGTTTATCCTCGCTGGCGCGGGGAACAC	GGAAGGAAGCTAAGCAAGCCCTTCTCTCAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCAATATGCTCTGGATCGTCATGATCACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTGTGTCTCATGAGAATCATCAACCTGAGCC
CGGTTTATCTCCGCTGGCGCGGGGAACAC	TTCCGTATCGAGACCACTGATCGCTTCCGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTCTCCCCCCTGAGTAACTCCTTTCGATAATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTTTTGTATTTGTTTCTATGGCGGATCATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAAGCGCGAAATTGAAAGGGGATCAGAAGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGTCCGGCGTTAAAACAAGTTTGCCGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATAAAACAAACCAGGCGGCAGCAGATGAATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGCGGATTGAAAATCCGTTTTCGGCCAGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020492.1\|WP_001208002.1\|3037024_3037822_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP020492.1\|WP_053444834.1\|3048182_3048956_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP020492.1\|WP_000842512.1\|3044803_3045391_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP020492.1\|WP_053444840.1\|3026406_3026943_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP020492.1\|WP_077248498.1\|3045470_3048170_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP020492.1\|WP_000178258.1\|3048975_3049482_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP020492.1\|WP_001079642.1\|3049963_3050500_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP020492.1\|WP_000036734.1\|3040150_3041449_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP020492.1\|WP_000210863.1\|3041531_3043169_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP020492.1\|WP_053444841.1\|3025337_3026393_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP020492.1\|WP_053444842.1\|3024580_3025327_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP020492.1\|WP_053444837.1\|3032626_3034339_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP020492.1\|WP_001199961.1\|3039343_3040015_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP020492.1\|WP_053444839.1\|3026939_3028490_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP020492.1\|WP_000108313.1\|3036572_3036935_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP020492.1\|WP_053444836.1\|3034338_3036138_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP020492.1\|WP_053444838.1\|3031816_3032551_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP020492.1\|WP_000816751.1\|3049496_3049967_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP020492.1\|WP_053444910.1\|3028910_3031559_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP020492.1\|WP_000210454.1\|3043396_3044197_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569

Protein	Function_ID	Function_description	E-value
NZ_CP020492.1\|WP_001208002.1\|3037024_3037822_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
NZ_CP020492.1\|WP_053444834.1\|3048182_3048956_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP020492.1\|WP_000842512.1\|3044803_3045391_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_CP020492.1\|WP_053444840.1\|3026406_3026943_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.06891e-24
NZ_CP020492.1\|WP_077248498.1\|3045470_3048170_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP020492.1\|WP_000178258.1\|3048975_3049482_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.6337e-105
NZ_CP020492.1\|WP_001079642.1\|3049963_3050500_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	1.00241e-120
NZ_CP020492.1\|WP_000036734.1\|3040150_3041449_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP020492.1\|WP_000210863.1\|3041531_3043169_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP020492.1\|WP_053444841.1\|3025337_3026393_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.10143e-137
NZ_CP020492.1\|WP_053444842.1\|3024580_3025327_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.19412e-48
NZ_CP020492.1\|WP_053444837.1\|3032626_3034339_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP020492.1\|WP_001199961.1\|3039343_3040015_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP020492.1\|WP_053444839.1\|3026939_3028490_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP020492.1\|WP_000108313.1\|3036572_3036935_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP020492.1\|WP_053444836.1\|3034338_3036138_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP020492.1\|WP_053444838.1\|3031816_3032551_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.48984e-138
NZ_CP020492.1\|WP_000816751.1\|3049496_3049967_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	2.05552e-100
NZ_CP020492.1\|WP_053444910.1\|3028910_3031559_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.41889e-167
NZ_CP020492.1\|WP_000210454.1\|3043396_3044197_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159

>NZ_CP020492.1|WP_001208002.1|3037024_3037822_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP020492.1|WP_000108313.1|3036572_3036935_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP020492.1|WP_053444836.1|3034338_3036138_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPDLVKELVELLWLKGDEPVMVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSEALLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP020492.1|WP_053444837.1|3032626_3034339_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIEKLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDQLIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP020492.1|WP_053444838.1|3031816_3032551_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAEANAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGRLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP020492.1|WP_053444910.1|3028910_3031559_-|CRISPR-associated-helicase/endonuclease-Cas3
MAMFNYWGKTCRGEKDGGDDYHLLCWHSLDVAAMGYEMVKRNLYGLADYFRQLGIAEIEPAAQFFAWLLCWHDTGKFASSFQQRYSHPDLHVPAERRQNYEPIPHATLGYGLWNSWLGECPELLPDSTLPPRKLKRVIAMWMPLVTGHHGHPPKGLGEFNHFLQQDKDAAREFLTSIKALFPLIEIPAFWDEDDGIELFQRLSWLISATVVLADWTGSSTRYFPRIARAMPIDAYWQQAQEKAQAALTIFPPSSTVAPFSGVNTLFPFIRQPTPLQQKVLELEVNNAGPQLFILEDVTGAGKTEAALILTHRLMAAGKAQGLFFGLPTMATANAMFDRLAKSWLALYESASRPSLVLAHSARGLMDRFNQSLWSGDLSGSEEPDEKQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHAYDAYMSRILESLIENQARNGNTTILLSATLSQQQRDRLVAAFARGTKSNMEAPLLGLDNYPWLTQVTSEDVVSQHVATRKEVERSVNVGWLYSESDCIERIEQAVKQGQCVAWIRNSVDDAIRIYRQLITRGVIPAENLSLFHSRFAFYDRQRIETETLLRFGKDESSQRAGKVLIATQVIEQSLDADMDVMISDLAPVDLLIQRAGRLQRHIRDRNGQLKESGPDERDKPELLVLAPEWTDEPREDWFSSAMRNSAYVYPDHGRLWLTQRVLREQGAIRMPQSARLLIESVYGDNVAMPDGFTKSGQQQEGKLHCDRAFAYQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVIPYASGEHAWEMSVLRVRQSWWNKHKDEFERLDGEPLRKWCVEQHQDKDFALVIAVTDFAACGYSENEGLIGKFE
>NZ_CP020492.1|WP_053444839.1|3026939_3028490_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MGSLLTTPWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADTLHKALAPLEHAFQFGPESPSFMQDFEPLNGEKISIGSLLPETPGAQTTKFNKDHFIKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQRDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFTTLQSGYCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQDNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRRYFDDHVFTNPYESSDLKRIMTARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP020492.1|WP_053444840.1|3026406_3026943_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSVTVNDACLSEGFRSLLMQTHTLWKIDGQEWRVTALALTAALAANVKAIDERQKFAAQLNDVMSELRFTRLCAVKTPDELLRQLRRAVKLSNGAVNLFSLAEDIFCWCREQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDTDNEQD
>NZ_CP020492.1|WP_053444841.1|3025337_3026393_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRTGRIAREAAQILIDSGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEAVKALAHLLAEEKRAPKDEELALLRKDRMAVDIAMFGRMLANKPEYNIEAACQVAHAFGVSETIVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRINALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA
>NZ_CP020492.1|WP_053444842.1|3024580_3025327_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNHHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRQYQDKFNALKLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP020492.1|WP_001199961.1|3039343_3040015_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP020492.1|WP_000036734.1|3040150_3041449_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP020492.1|WP_000210863.1|3041531_3043169_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP020492.1|WP_000210454.1|3043396_3044197_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP020492.1|WP_000842512.1|3044803_3045391_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP020492.1|WP_077248498.1|3045470_3048170_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNVFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAIFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP020492.1|WP_053444834.1|3048182_3048956_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENEIASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP020492.1|WP_000178258.1|3048975_3049482_+|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTIGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP020492.1|WP_000816751.1|3049496_3049967_+|fimbrial-protein
MKRALILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP020492.1|WP_001079642.1|3049963_3050500_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFKLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP020492_2	2.6\|3038254\|33\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038254-3038286	33	NZ_CP020492.1	1021640-1021672	0	1.0

1. spacer 2.6|3038254|33|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to position: 1021640-1021672, mismatch: 0, identity: 1.0

ccgctgactgaaaatgacgacgtaccggaaggc	CRISPR spacer
ccgctgactgaaaatgacgacgtaccggaaggc	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020492_1	1.1\|3021178\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021178-3021209	32	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	25444-25475	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT331608	Escherichia phage SECphi4, partial genome	11543-11574	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT884013	Escherichia phage vb_EcoS_bov16_1, complete genome	36190-36221	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT884015	Escherichia phage vb_EcoS_bov25_1D, complete genome	36160-36191	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	KM896878	Escherichia phage YD-2008.s, complete genome	39322-39353	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	LT960609	Escherichia phage SECphi18 genome assembly, complete genome: monopartite	44297-44328	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT446391	UNVERIFIED: Escherichia virus TH13, complete genome	36976-37007	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MK138527	Escherichia phage vB_EcoS_PNS1, complete genome	24108-24139	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MN850629	Escherichia phage mckay, complete genome	1-31	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT884014	Escherichia phage vb_EcoS_bov22_1, partial genome	15596-15627	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT446389	UNVERIFIED: Escherichia virus TH11, complete genome	40818-40849	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT884012	Escherichia phage vb_EcoS_bov11C2, complete genome	36190-36221	6	0.812
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	MT951623	Escherichia phage vB_EcoS_bov15_1, complete genome	36190-36221	6	0.812
NZ_CP020492_1	1.20\|3022338\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022338-3022369	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	953723-953754	6	0.812
NZ_CP020492_1	1.20\|3022338\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022338-3022369	32	NZ_CP019604	Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence	300294-300325	6	0.812
NZ_CP020492_1	1.25\|3021180\|32\|NZ_CP020492\|PILER-CR	3021180-3021211	32	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	25444-25475	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT331608	Escherichia phage SECphi4, partial genome	11543-11574	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT884013	Escherichia phage vb_EcoS_bov16_1, complete genome	36190-36221	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT884015	Escherichia phage vb_EcoS_bov25_1D, complete genome	36160-36191	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	KM896878	Escherichia phage YD-2008.s, complete genome	39322-39353	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	LT960609	Escherichia phage SECphi18 genome assembly, complete genome: monopartite	44297-44328	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT446391	UNVERIFIED: Escherichia virus TH13, complete genome	36976-37007	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MK138527	Escherichia phage vB_EcoS_PNS1, complete genome	24108-24139	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MN850629	Escherichia phage mckay, complete genome	1-31	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT884014	Escherichia phage vb_EcoS_bov22_1, partial genome	15596-15627	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT446389	UNVERIFIED: Escherichia virus TH11, complete genome	40818-40849	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT884012	Escherichia phage vb_EcoS_bov11C2, complete genome	36190-36221	6	0.812
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	MT951623	Escherichia phage vB_EcoS_bov15_1, complete genome	36190-36221	6	0.812
NZ_CP020492_1	1.44\|3022340\|32\|NZ_CP020492\|PILER-CR	3022340-3022371	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	953723-953754	6	0.812
NZ_CP020492_1	1.44\|3022340\|32\|NZ_CP020492\|PILER-CR	3022340-3022371	32	NZ_CP019604	Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence	300294-300325	6	0.812
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_LR735422	Staphylococcus epidermidis strain none isolate Se_BPH0697 plasmid 2	56005-56036	6	0.812
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP010857	Marinovum algicola DG 898 plasmid pMaD2, complete sequence	28176-28207	7	0.781
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	367005-367036	7	0.781
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP010857	Marinovum algicola DG 898 plasmid pMaD2, complete sequence	28176-28207	7	0.781
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	367005-367036	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP027420	Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed1, complete sequence	32810-32841	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP015644	Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence	38951-38982	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP015644	Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence	58080-58111	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP017431	Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence	126493-126524	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP017431	Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence	145627-145658	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP017429	Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence	2082-2113	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP017429	Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence	21216-21247	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1	1228-1259	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP016158	Staphylococcus simulans strain MR2 plasmid unnamed1	20361-20392	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	AP013557	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S41-C64, * SEQUENCING IN PROGRESS *, 3 ordered pieces	12405-12436	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	KC465898	Pelagibacter phage HTVC010P, complete genome	26694-26725	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	AP013554	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S23-C36, * SEQUENCING IN PROGRESS *, 7 ordered pieces	14467-14498	7	0.781
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	AP013556	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S32-C64, * SEQUENCING IN PROGRESS *, 6 ordered pieces	21938-21969	7	0.781
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MK977708	Mycobacterium phage Fulbright, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MG099948	Mycobacterium phage Philonius, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MT723932	Mycobacterium phage Schnauzer, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	KU935726	Mycobacterium phage Xerxes, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	KU935730	Mycobacterium phage Pipsqueaks, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MH316570	Mycobacterium phage Silvafighter, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MK524518	Mycobacterium phage Smurph, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MK524515	Mycobacterium phage Parmesanjohn, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MH697585	Mycobacterium phage Gex, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	KM588359	Mycobacterium phage Carcharodon, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MH697576	Mycobacterium phage Aggie, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MH697593	Mycobacterium phage Tapioca, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MG099936	Mycobacterium phage Andies, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	NC_031243	Mycobacterium phage Xeno, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	MK524528	Mycobacterium phage ShrimpFriedEgg, complete genome	4473-4504	8	0.75
NZ_CP020492_1	1.9\|3021666\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021666-3021697	32	JN256079	Mycobacterium phage Charlie, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP020927	Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence	155739-155770	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	181103-181134	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP033227	Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence	143899-143930	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	79748-79779	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP013503	Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP013509	Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP013520	Rhizobium sp. N113 plasmid pRspN113c, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP013493	Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	76279-76310	8	0.75
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5875279-5875310	8	0.75
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	NC_030916	Tsukamurella phage TPA4, complete genome	22787-22818	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MK977708	Mycobacterium phage Fulbright, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MG099948	Mycobacterium phage Philonius, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MT723932	Mycobacterium phage Schnauzer, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	KU935726	Mycobacterium phage Xerxes, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	KU935730	Mycobacterium phage Pipsqueaks, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MH316570	Mycobacterium phage Silvafighter, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MK524518	Mycobacterium phage Smurph, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MK524515	Mycobacterium phage Parmesanjohn, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MH697585	Mycobacterium phage Gex, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	KM588359	Mycobacterium phage Carcharodon, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MH697576	Mycobacterium phage Aggie, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MH697593	Mycobacterium phage Tapioca, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MG099936	Mycobacterium phage Andies, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	NC_031243	Mycobacterium phage Xeno, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	MK524528	Mycobacterium phage ShrimpFriedEgg, complete genome	4473-4504	8	0.75
NZ_CP020492_1	1.33\|3021668\|32\|NZ_CP020492\|PILER-CR	3021668-3021699	32	JN256079	Mycobacterium phage Charlie, complete genome	4456-4487	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP020927	Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence	155739-155770	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	181103-181134	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP033227	Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence	143899-143930	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	79748-79779	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP013503	Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP013509	Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP013520	Rhizobium sp. N113 plasmid pRspN113c, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP013493	Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence	75894-75925	8	0.75
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	76279-76310	8	0.75
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5875279-5875310	8	0.75
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	NC_030916	Tsukamurella phage TPA4, complete genome	22787-22818	8	0.75
NZ_CP020492_2	2.10\|3038499\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038499-3038530	32	NZ_CP049142	Pseudomonas nitroreducens strain HBP1 plasmid pPniHBP1_1, complete sequence	53932-53963	8	0.75
NZ_CP020492_2	2.12\|3038621\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038621-3038652	32	MN310546	Microbacterium phage PhriedRice, complete genome	11760-11791	8	0.75
NZ_CP020492_2	2.12\|3038621\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038621-3038652	32	MT657337	Microbacterium phage Mazun, complete genome	11790-11821	8	0.75
NZ_CP020492_2	2.12\|3038621\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038621-3038652	32	MT310890	Microbacterium phage Phedro, complete genome	11749-11780	8	0.75
NZ_CP020492_2	2.12\|3038621\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038621-3038652	32	MT310889	Microbacterium phage Phractured, complete genome	11749-11780	8	0.75
NZ_CP020492_2	2.12\|3038621\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038621-3038652	32	MT310891	Microbacterium phage Pharky, complete genome	11749-11780	8	0.75
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	12814-12845	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	268158-268189	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NC_012723	Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence	61726-61757	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NC_012718	Burkholderia glumae BGR1 plasmid bglu_2p, complete sequence	24335-24366	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP009432	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_2, complete sequence	124142-124173	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP009433	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence	49743-49774	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	180837-180868	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP035903	Burkholderia glumae strain 257sh-1 plasmid plas2, complete sequence	124523-124554	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	8707-8738	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP052865	Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence	12886-12917	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP052865	Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence	157685-157716	9	0.719
NZ_CP020492_1	1.6\|3021483\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021483-3021514	32	NZ_CP047317	Burkholderia glumae AU6208 plasmid pwszb, complete sequence	151-182	9	0.719
NZ_CP020492_1	1.7\|3021544\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021544-3021575	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	421297-421328	9	0.719
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	497454-497485	9	0.719
NZ_CP020492_1	1.15\|3022033\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022033-3022064	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	260315-260346	9	0.719
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	398666-398697	9	0.719
NZ_CP020492_1	1.19\|3022277\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022277-3022308	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	4807-4838	9	0.719
NZ_CP020492_1	1.20\|3022338\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022338-3022369	32	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	21093-21124	9	0.719
NZ_CP020492_1	1.24\|3022582\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022582-3022613	32	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	397066-397097	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	12814-12845	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	268158-268189	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NC_012723	Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence	61726-61757	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NC_012718	Burkholderia glumae BGR1 plasmid bglu_2p, complete sequence	24335-24366	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP009432	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_2, complete sequence	124142-124173	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP009433	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence	49743-49774	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	180837-180868	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP035903	Burkholderia glumae strain 257sh-1 plasmid plas2, complete sequence	124523-124554	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	8707-8738	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP052865	Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence	12886-12917	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP052865	Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence	157685-157716	9	0.719
NZ_CP020492_1	1.30\|3021485\|32\|NZ_CP020492\|PILER-CR	3021485-3021516	32	NZ_CP047317	Burkholderia glumae AU6208 plasmid pwszb, complete sequence	151-182	9	0.719
NZ_CP020492_1	1.31\|3021546\|32\|NZ_CP020492\|PILER-CR	3021546-3021577	32	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	421297-421328	9	0.719
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	497454-497485	9	0.719
NZ_CP020492_1	1.39\|3022035\|32\|NZ_CP020492\|PILER-CR	3022035-3022066	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	260315-260346	9	0.719
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	398666-398697	9	0.719
NZ_CP020492_1	1.43\|3022279\|32\|NZ_CP020492\|PILER-CR	3022279-3022310	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	4807-4838	9	0.719
NZ_CP020492_1	1.44\|3022340\|32\|NZ_CP020492\|PILER-CR	3022340-3022371	32	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	21093-21124	9	0.719
NZ_CP020492_1	1.48\|3022584\|32\|NZ_CP020492\|PILER-CR	3022584-3022615	32	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	397066-397097	9	0.719
NZ_CP020492_2	2.1\|3037949\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3037949-3037980	32	NC_047851	Brevibacterium phage LuckyBarnes, complete genome	31262-31293	9	0.719
NZ_CP020492_2	2.6\|3038254\|33\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038254-3038286	33	NZ_CP031163	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence	413526-413558	9	0.727
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP018210	Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_1, complete sequence	16314-16345	9	0.719
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	MN693083	Marine virus AFVG_25M55, complete genome	1394-1425	9	0.719
NZ_CP020492_1	1.7\|3021544\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021544-3021575	32	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	523474-523505	10	0.688
NZ_CP020492_1	1.7\|3021544\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021544-3021575	32	NC_022043	Paracoccus aminophilus JCM 7686 plasmid pAMI5, complete sequence	85808-85839	10	0.688
NZ_CP020492_1	1.8\|3021605\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021605-3021636	32	MT889371	Microbacterium phage DelaGarza, complete genome	20155-20186	10	0.688
NZ_CP020492_1	1.12\|3021849\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3021849-3021880	32	HM134276	Enterobacteria phage RB16, complete genome	44196-44227	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	1152192-1152223	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	387860-387891	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	930491-930522	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	337320-337351	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1393710-1393741	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	793466-793497	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	119509-119540	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	1587953-1587984	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	312101-312132	10	0.688
NZ_CP020492_1	1.16\|3022094\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022094-3022125	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	1150531-1150562	10	0.688
NZ_CP020492_1	1.24\|3022582\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022582-3022613	32	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	162087-162118	10	0.688
NZ_CP020492_1	1.24\|3022582\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022582-3022613	32	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	162432-162463	10	0.688
NZ_CP020492_1	1.24\|3022582\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022582-3022613	32	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	162417-162448	10	0.688
NZ_CP020492_1	1.31\|3021546\|32\|NZ_CP020492\|PILER-CR	3021546-3021577	32	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	523474-523505	10	0.688
NZ_CP020492_1	1.31\|3021546\|32\|NZ_CP020492\|PILER-CR	3021546-3021577	32	NC_022043	Paracoccus aminophilus JCM 7686 plasmid pAMI5, complete sequence	85808-85839	10	0.688
NZ_CP020492_1	1.32\|3021607\|32\|NZ_CP020492\|PILER-CR	3021607-3021638	32	MT889371	Microbacterium phage DelaGarza, complete genome	20155-20186	10	0.688
NZ_CP020492_1	1.36\|3021851\|32\|NZ_CP020492\|PILER-CR	3021851-3021882	32	HM134276	Enterobacteria phage RB16, complete genome	44196-44227	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	1152192-1152223	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	387860-387891	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	930491-930522	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	337320-337351	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1393710-1393741	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	793466-793497	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	119509-119540	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	1587953-1587984	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	312101-312132	10	0.688
NZ_CP020492_1	1.40\|3022096\|32\|NZ_CP020492\|PILER-CR	3022096-3022127	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	1150531-1150562	10	0.688
NZ_CP020492_1	1.48\|3022584\|32\|NZ_CP020492\|PILER-CR	3022584-3022615	32	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	162087-162118	10	0.688
NZ_CP020492_1	1.48\|3022584\|32\|NZ_CP020492\|PILER-CR	3022584-3022615	32	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	162432-162463	10	0.688
NZ_CP020492_1	1.48\|3022584\|32\|NZ_CP020492\|PILER-CR	3022584-3022615	32	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	162417-162448	10	0.688
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	168380-168411	10	0.688
NZ_CP020492_2	2.7\|3038316\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038316-3038347	32	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	378504-378535	10	0.688
NZ_CP020492_2	2.10\|3038499\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038499-3038530	32	MH884508	Bacillus phage vB_BcoS-136, complete genome	104413-104444	10	0.688
NZ_CP020492_2	2.18\|3038987\|32\|NZ_CP020492\|CRISPRCasFinder,CRT,PILER-CR	3038987-3039018	32	NZ_CP049029	Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence	310272-310303	10	0.688
NZ_CP020492_1	1.20\|3022338\|32\|NZ_CP020492\|CRISPRCasFinder,CRT	3022338-3022369	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	672581-672612	11	0.656
NZ_CP020492_1	1.44\|3022340\|32\|NZ_CP020492\|PILER-CR	3022340-3022371	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	672581-672612	11	0.656

1. spacer 1.1|3021178|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.812

gatttttcgccagccactccagccagt--gctgc	CRISPR spacer
gcttcttcgccagccactcccgccattcggct--	Protospacer
* **.*************** **** *  ***

2. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT331608 (Escherichia phage SECphi4, partial genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

3. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT884013 (Escherichia phage vb_EcoS_bov16_1, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

4. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT884015 (Escherichia phage vb_EcoS_bov25_1D, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

5. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KM896878 (Escherichia phage YD-2008.s, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

6. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to LT960609 (Escherichia phage SECphi18 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

7. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT446391 (UNVERIFIED: Escherichia virus TH13, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

8. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MK138527 (Escherichia phage vB_EcoS_PNS1, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

9. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MN850629 (Escherichia phage mckay, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttc-	Protospacer
*** ************* ******* *. **

10. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT884014 (Escherichia phage vb_EcoS_bov22_1, partial genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

11. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT446389 (UNVERIFIED: Escherichia virus TH11, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

12. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT884012 (Escherichia phage vb_EcoS_bov11C2, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

13. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT951623 (Escherichia phage vB_EcoS_bov15_1, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

14. spacer 1.20|3022338|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
cgggcggtcgacatcgggcaggaatttgccca	Protospacer
* **************.**********    *

15. spacer 1.20|3022338|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP019604 (Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence) position: , mismatch: 6, identity: 0.812

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
ctcgcggtggacatcgagcaggaaattcccaa	Protospacer
*. ***** *************** ***  **

16. spacer 1.25|3021180|32|NZ_CP020492|PILER-CR matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.812

gatttttcgccagccactccagccagt--gctgc	CRISPR spacer
gcttcttcgccagccactcccgccattcggct--	Protospacer
* **.*************** **** *  ***

17. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT331608 (Escherichia phage SECphi4, partial genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

18. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT884013 (Escherichia phage vb_EcoS_bov16_1, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

19. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT884015 (Escherichia phage vb_EcoS_bov25_1D, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

20. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to KM896878 (Escherichia phage YD-2008.s, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

21. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to LT960609 (Escherichia phage SECphi18 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

22. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT446391 (UNVERIFIED: Escherichia virus TH13, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

23. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MK138527 (Escherichia phage vB_EcoS_PNS1, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

24. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MN850629 (Escherichia phage mckay, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttc-	Protospacer
*** ************* ******* *. **

25. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT884014 (Escherichia phage vb_EcoS_bov22_1, partial genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

26. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT446389 (UNVERIFIED: Escherichia virus TH11, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

27. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT884012 (Escherichia phage vb_EcoS_bov11C2, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

28. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to MT951623 (Escherichia phage vB_EcoS_bov15_1, complete genome) position: , mismatch: 6, identity: 0.812

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtcttcggcttcttcatcgtcgtcatcttct	Protospacer
*** ************* ******* *. **.

29. spacer 1.44|3022340|32|NZ_CP020492|PILER-CR matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
cgggcggtcgacatcgggcaggaatttgccca	Protospacer
* **************.**********    *

30. spacer 1.44|3022340|32|NZ_CP020492|PILER-CR matches to NZ_CP019604 (Croceicoccus marinus strain E4A9 plasmid pCME4A9II, complete sequence) position: , mismatch: 6, identity: 0.812

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
ctcgcggtggacatcgagcaggaaattcccaa	Protospacer
*. ***** *************** ***  **

31. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR735422 (Staphylococcus epidermidis strain none isolate Se_BPH0697 plasmid 2) position: , mismatch: 6, identity: 0.812

gttatgatttgtattgtaatataa--ttaacgaa	CRISPR spacer
attatgatttgtttagtaatataaggttaaca--	Protospacer
.*********** * *********  *****.

32. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP010857 (Marinovum algicola DG 898 plasmid pMaD2, complete sequence) position: , mismatch: 7, identity: 0.781

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tcaccacgtcgccgatcgagatcaggccgaca	Protospacer
*  *.*****.******************. .

33. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 7, identity: 0.781

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tgtgccggtcatcgatcgagatcaggcagggg	Protospacer
**. .  ****.*************** ****

34. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP010857 (Marinovum algicola DG 898 plasmid pMaD2, complete sequence) position: , mismatch: 7, identity: 0.781

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tcaccacgtcgccgatcgagatcaggccgaca	Protospacer
*  *.*****.******************. .

35. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 7, identity: 0.781

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tgtgccggtcatcgatcgagatcaggcagggg	Protospacer
**. .  ****.*************** ****

36. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027420 (Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

37. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015644 (Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

38. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015644 (Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

39. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017431 (Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

40. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017431 (Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

41. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017429 (Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

42. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017429 (Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

43. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016158 (Staphylococcus simulans strain MR2 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

44. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016158 (Staphylococcus simulans strain MR2 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
attatgatttttattgtaatatatttcattat	Protospacer
.********* ************ ** *. *

45. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to AP013557 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S41-C64, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
gttttgatctgtattgtaatataaaattagaa	Protospacer
*** ****.***************     ***

46. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to KC465898 (Pelagibacter phage HTVC010P, complete genome) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
gttttgatctgtattgtaatataaaattagaa	Protospacer
*** ****.***************     ***

47. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to AP013554 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S23-C36, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
gttttgatctgtattgtaatataaaactagaa	Protospacer
*** ****.***************     ***

48. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to AP013556 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S32-C64, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces) position: , mismatch: 7, identity: 0.781

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
gttttgatctgtattgtaatataaaattagaa	Protospacer
*** ****.***************     ***

49. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MK977708 (Mycobacterium phage Fulbright, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

50. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MG099948 (Mycobacterium phage Philonius, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

51. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT723932 (Mycobacterium phage Schnauzer, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

52. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KU935726 (Mycobacterium phage Xerxes, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

53. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KU935730 (Mycobacterium phage Pipsqueaks, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

54. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MH316570 (Mycobacterium phage Silvafighter, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

55. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MK524518 (Mycobacterium phage Smurph, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

56. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MK524515 (Mycobacterium phage Parmesanjohn, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

57. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MH697585 (Mycobacterium phage Gex, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

58. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KM588359 (Mycobacterium phage Carcharodon, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

59. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MH697576 (Mycobacterium phage Aggie, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

60. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MH697593 (Mycobacterium phage Tapioca, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

61. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MG099936 (Mycobacterium phage Andies, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

62. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_031243 (Mycobacterium phage Xeno, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

63. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MK524528 (Mycobacterium phage ShrimpFriedEgg, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

64. spacer 1.9|3021666|32|NZ_CP020492|CRISPRCasFinder,CRT matches to JN256079 (Mycobacterium phage Charlie, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

65. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP020927 (Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgcgcttatcaccgatctggatcaggccgggg	Protospacer
.** . ..********* .*************

66. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgcgcttatcaccgatctggatcaggccgggg	Protospacer
.** . ..********* .*************

67. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgcgcttatcaccgatctggatcaggccgggg	Protospacer
.** . ..********* .*************

68. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

69. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

70. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

71. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

72. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

73. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

74. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtgttcggcttcgtcgacgtcgacgggctca	Protospacer
************* **.****** *    **

75. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_030916 (Tsukamurella phage TPA4, complete genome) position: , mismatch: 8, identity: 0.75

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtgttcggcatcttcaaggtcgggctgaacg	Protospacer
********** ******* ****  .* * *

76. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MK977708 (Mycobacterium phage Fulbright, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

77. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MG099948 (Mycobacterium phage Philonius, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

78. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MT723932 (Mycobacterium phage Schnauzer, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

79. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to KU935726 (Mycobacterium phage Xerxes, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

80. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to KU935730 (Mycobacterium phage Pipsqueaks, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

81. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MH316570 (Mycobacterium phage Silvafighter, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

82. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MK524518 (Mycobacterium phage Smurph, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

83. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MK524515 (Mycobacterium phage Parmesanjohn, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

84. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MH697585 (Mycobacterium phage Gex, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

85. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to KM588359 (Mycobacterium phage Carcharodon, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

86. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MH697576 (Mycobacterium phage Aggie, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

87. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MH697593 (Mycobacterium phage Tapioca, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

88. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MG099936 (Mycobacterium phage Andies, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

89. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to NC_031243 (Mycobacterium phage Xeno, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

90. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to MK524528 (Mycobacterium phage ShrimpFriedEgg, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

91. spacer 1.33|3021668|32|NZ_CP020492|PILER-CR matches to JN256079 (Mycobacterium phage Charlie, complete genome) position: , mismatch: 8, identity: 0.75

cgcaaccgctagatgaccgacaacgagaatgg	CRISPR spacer
aacggccgcgagatgaccgacgacgagaaggc	Protospacer
 .*..**** ***********.******* *

92. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP020927 (Sphingobium yanoikuyae strain SHJ plasmid pSES189, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgcgcttatcaccgatctggatcaggccgggg	Protospacer
.** . ..********* .*************

93. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgcgcttatcaccgatctggatcaggccgggg	Protospacer
.** . ..********* .*************

94. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP033227 (Sphingobium yanoikuyae strain SJTF8 plasmid pF1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgcgcttatcaccgatctggatcaggccgggg	Protospacer
.** . ..********* .*************

95. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

96. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

97. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

98. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

99. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

100. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 8, identity: 0.75

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tatcagcttcaccgagcgtgatcaggccgggc	Protospacer
*..* .* ******* ** ************

101. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtgttcggcttcgtcgacgtcgacgggctca	Protospacer
************* **.****** *    **

102. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to NC_030916 (Tsukamurella phage TPA4, complete genome) position: , mismatch: 8, identity: 0.75

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
cgtgttcggcatcttcaaggtcgggctgaacg	Protospacer
********** ******* ****  .* * *

103. spacer 2.10|3038499|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049142 (Pseudomonas nitroreducens strain HBP1 plasmid pPniHBP1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gggcaatatgctctggatcgtcat------gatcaccc	CRISPR spacer
gggcaatatgcttttgatcgtcatctggaaga------	Protospacer
************.* *********      **

104. spacer 2.12|3038621|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MN310546 (Microbacterium phage PhriedRice, complete genome) position: , mismatch: 8, identity: 0.75

ttccgtatcgagaccactgatcgcttccgctg	CRISPR spacer
atcaggctcaagaccactgatcgcgtccgcga	Protospacer
 ** *  **.************** ***** .

105. spacer 2.12|3038621|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MT657337 (Microbacterium phage Mazun, complete genome) position: , mismatch: 8, identity: 0.75

ttccgtatcgagaccactgatcgcttccgctg	CRISPR spacer
atcaggctcaagaccactgatcgcgtccgcga	Protospacer
 ** *  **.************** ***** .

106. spacer 2.12|3038621|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MT310890 (Microbacterium phage Phedro, complete genome) position: , mismatch: 8, identity: 0.75

ttccgtatcgagaccactgatcgcttccgctg	CRISPR spacer
atcaggctcaagaccactgatcgcgtccgcga	Protospacer
 ** *  **.************** ***** .

107. spacer 2.12|3038621|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MT310889 (Microbacterium phage Phractured, complete genome) position: , mismatch: 8, identity: 0.75

ttccgtatcgagaccactgatcgcttccgctg	CRISPR spacer
atcaggctcaagaccactgatcgcgtccgcga	Protospacer
 ** *  **.************** ***** .

108. spacer 2.12|3038621|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MT310891 (Microbacterium phage Pharky, complete genome) position: , mismatch: 8, identity: 0.75

ttccgtatcgagaccactgatcgcttccgctg	CRISPR spacer
atcaggctcaagaccactgatcgcgtccgcga	Protospacer
 ** *  **.************** ***** .

109. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

110. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

111. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_012723 (Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

112. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_012718 (Burkholderia glumae BGR1 plasmid bglu_2p, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

113. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP009432 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

114. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP009433 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

115. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

116. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP035903 (Burkholderia glumae strain 257sh-1 plasmid plas2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

117. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

118. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP052865 (Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

119. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP052865 (Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

120. spacer 1.6|3021483|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP047317 (Burkholderia glumae AU6208 plasmid pwszb, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

121. spacer 1.7|3021544|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 9, identity: 0.719

agctcaggcccgcaccgaaacaacgctcgata	CRISPR spacer
ggcagaggcccgcaccgacgcaacgctcatcg	Protospacer
.**  ************* .********. ..

122. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 9, identity: 0.719

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tattagcttcaccgagcgtgatcaggccgggc	Protospacer
*... .* ******* ** ************

123. spacer 1.15|3022033|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.719

aaaaggccagccgaggtcttcggaaacatacc	CRISPR spacer
ctgcgcggagccgaggtcttcggaatcacacc	Protospacer
  . *   ***************** **.***

124. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
gcgtattgggccagcacaaaggcggcgctcaa	Protospacer
.* .*  .******.** *************

125. spacer 1.19|3022277|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
aaatttcggcttcttccgcgtcgtcttccttc	Protospacer
 .  ************ .*********. *.*

126. spacer 1.20|3022338|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
catatgttcgacatcgcgcaggaattgcgact	Protospacer
*  ..* ********* ********* ***

127. spacer 1.24|3022582|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
accttcttgtaattcatcatacttctcttcaa	Protospacer
.*****.********* ********  . .*

128. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

129. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

130. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NC_012723 (Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

131. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NC_012718 (Burkholderia glumae BGR1 plasmid bglu_2p, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

132. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP009432 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

133. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP009433 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

134. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

135. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP035903 (Burkholderia glumae strain 257sh-1 plasmid plas2, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

136. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

137. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP052865 (Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

138. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP052865 (Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

139. spacer 1.30|3021485|32|NZ_CP020492|PILER-CR matches to NZ_CP047317 (Burkholderia glumae AU6208 plasmid pwszb, complete sequence) position: , mismatch: 9, identity: 0.719

cggggcatcaatacgcgcaaccgggtagccct	CRISPR spacer
tccagtatcgatacgcgcaaccggttagccag	Protospacer
.  .*.***.************** *****

140. spacer 1.31|3021546|32|NZ_CP020492|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 9, identity: 0.719

agctcaggcccgcaccgaaacaacgctcgata	CRISPR spacer
ggcagaggcccgcaccgacgcaacgctcatcg	Protospacer
.**  ************* .********. ..

141. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 9, identity: 0.719

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
tattagcttcaccgagcgtgatcaggccgggc	Protospacer
*... .* ******* ** ************

142. spacer 1.39|3022035|32|NZ_CP020492|PILER-CR matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.719

aaaaggccagccgaggtcttcggaaacatacc	CRISPR spacer
ctgcgcggagccgaggtcttcggaatcacacc	Protospacer
  . *   ***************** **.***

143. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
gcgtattgggccagcacaaaggcggcgctcaa	Protospacer
.* .*  .******.** *************

144. spacer 1.43|3022279|32|NZ_CP020492|PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtgttcggcttcttcaacgtcgtctttatcc	CRISPR spacer
aaatttcggcttcttccgcgtcgtcttccttc	Protospacer
 .  ************ .*********. *.*

145. spacer 1.44|3022340|32|NZ_CP020492|PILER-CR matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
catatgttcgacatcgcgcaggaattgcgact	Protospacer
*  ..* ********* ********* ***

146. spacer 1.48|3022584|32|NZ_CP020492|PILER-CR matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
accttcttgtaattcatcatacttctcttcaa	Protospacer
.*****.********* ********  . .*

147. spacer 2.1|3037949|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_047851 (Brevibacterium phage LuckyBarnes, complete genome) position: , mismatch: 9, identity: 0.719

tcgtagtcttccgggtaggcgttttcatccgg	CRISPR spacer
gccagctcttcccggtaggcgatttcatctgc	Protospacer
 *  . ****** ******** *******.*

148. spacer 2.6|3038254|33|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031163 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence) position: , mismatch: 9, identity: 0.727

ccgctgactgaaaatgacgacgtaccggaaggc	CRISPR spacer
cgtgacgccgaaaatgacgatctaccggaaggc	Protospacer
*     .*.***********. ***********

149. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018210 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_1, complete sequence) position: , mismatch: 9, identity: 0.719

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
tgcatgatttgtagtgtaatttaattcatggt	Protospacer
  .********** ****** ***** *.*.

150. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MN693083 (Marine virus AFVG_25M55, complete genome) position: , mismatch: 9, identity: 0.719

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
tctataatttgtattgtaatacaatagagaag	Protospacer
 .***.***************.*** .* .*.

151. spacer 1.7|3021544|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 10, identity: 0.688

agctcaggcccgcaccgaaacaacgctcgata	CRISPR spacer
ggaggcggcccgcaccgaaacatggctcgcag	Protospacer
.*    ****************  *****  .

152. spacer 1.7|3021544|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_022043 (Paracoccus aminophilus JCM 7686 plasmid pAMI5, complete sequence) position: , mismatch: 10, identity: 0.688

agctcaggcccgcaccgaaacaacgctcgata	CRISPR spacer
atgcgttgcccgcacggaaaaaacgctcgaag	Protospacer
*  .   ******** **** ********* .

153. spacer 1.8|3021605|32|NZ_CP020492|CRISPRCasFinder,CRT matches to MT889371 (Microbacterium phage DelaGarza, complete genome) position: , mismatch: 10, identity: 0.688

aacacggcggcaatatcgcgcccctgactggg	CRISPR spacer
tggagggcggcaatctcacgcccctgaccctc	Protospacer
 . * ********* **.**********.

154. spacer 1.12|3021849|32|NZ_CP020492|CRISPRCasFinder,CRT matches to HM134276 (Enterobacteria phage RB16, complete genome) position: , mismatch: 10, identity: 0.688

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgtctacgtcaccgatagagaacaggtgttca	Protospacer
.*.************* **** ****.    .

155. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

156. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

157. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

158. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

159. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

160. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

161. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

162. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

163. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

164. spacer 1.16|3022094|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

165. spacer 1.24|3022582|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 10, identity: 0.688

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
tccttcctgtattttagcatacttgtgctcga	Protospacer
 ********** **.*********  .* ..

166. spacer 1.24|3022582|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 10, identity: 0.688

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
tccttcctgtattttagcatacttgtgctcga	Protospacer
 ********** **.*********  .* ..

167. spacer 1.24|3022582|32|NZ_CP020492|CRISPRCasFinder,CRT matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 10, identity: 0.688

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
tccttcctgtattttagcatacttgtgctcga	Protospacer
 ********** **.*********  .* ..

168. spacer 1.31|3021546|32|NZ_CP020492|PILER-CR matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 10, identity: 0.688

agctcaggcccgcaccgaaacaacgctcgata	CRISPR spacer
ggaggcggcccgcaccgaaacatggctcgcag	Protospacer
.*    ****************  *****  .

169. spacer 1.31|3021546|32|NZ_CP020492|PILER-CR matches to NC_022043 (Paracoccus aminophilus JCM 7686 plasmid pAMI5, complete sequence) position: , mismatch: 10, identity: 0.688

agctcaggcccgcaccgaaacaacgctcgata	CRISPR spacer
atgcgttgcccgcacggaaaaaacgctcgaag	Protospacer
*  .   ******** **** ********* .

170. spacer 1.32|3021607|32|NZ_CP020492|PILER-CR matches to MT889371 (Microbacterium phage DelaGarza, complete genome) position: , mismatch: 10, identity: 0.688

aacacggcggcaatatcgcgcccctgactggg	CRISPR spacer
tggagggcggcaatctcacgcccctgaccctc	Protospacer
 . * ********* **.**********.

171. spacer 1.36|3021851|32|NZ_CP020492|PILER-CR matches to HM134276 (Enterobacteria phage RB16, complete genome) position: , mismatch: 10, identity: 0.688

tgcctacgtcaccgatcgagatcaggccgggg	CRISPR spacer
cgtctacgtcaccgatagagaacaggtgttca	Protospacer
.*.************* **** ****.    .

172. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

173. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

174. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

175. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

176. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

177. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

178. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

179. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

180. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

181. spacer 1.40|3022096|32|NZ_CP020492|PILER-CR matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

actcaaaaggccagtaccaaggcggcgctcac	CRISPR spacer
atgtcgaaggacagtaccagggcggcgctgcg	Protospacer
*. . .**** ********.*********

182. spacer 1.48|3022584|32|NZ_CP020492|PILER-CR matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 10, identity: 0.688

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
tccttcctgtattttagcatacttgtgctcga	Protospacer
 ********** **.*********  .* ..

183. spacer 1.48|3022584|32|NZ_CP020492|PILER-CR matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 10, identity: 0.688

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
tccttcctgtattttagcatacttgtgctcga	Protospacer
 ********** **.*********  .* ..

184. spacer 1.48|3022584|32|NZ_CP020492|PILER-CR matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 10, identity: 0.688

gccttcctgtaattcagcatacttcgacgtac	CRISPR spacer
tccttcctgtattttagcatacttgtgctcga	Protospacer
 ********** **.*********  .* ..

185. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 10, identity: 0.688

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
agtatgttttatattgtaatataatatatatt	Protospacer
. **** ***.**************  *..

186. spacer 2.7|3038316|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 10, identity: 0.688

gttatgatttgtattgtaatataattaacgaa	CRISPR spacer
agtatgttttatattgtaatataatatatatt	Protospacer
. **** ***.**************  *..

187. spacer 2.10|3038499|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to MH884508 (Bacillus phage vB_BcoS-136, complete genome) position: , mismatch: 10, identity: 0.688

gggcaatatgctctggatcgtcatgatcaccc	CRISPR spacer
atgcaatttgctctggatggtcatggtattga	Protospacer
. ***** ********** ******.*  .

188. spacer 2.18|3038987|32|NZ_CP020492|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049029 (Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence) position: , mismatch: 10, identity: 0.688

atgcggattgaaaatccgttttcggccagcgt	CRISPR spacer
gcagacacggaaaatccggtttcggcaagcgt	Protospacer
... . *. ********* ******* *****

189. spacer 1.20|3022338|32|NZ_CP020492|CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
ccggcggtcgacatcgtccaggaccccgcggc	Protospacer
****************  ***** ...  ..

190. spacer 1.44|3022340|32|NZ_CP020492|PILER-CR matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcggtcgacatcgagcaggaatttcgaaa	CRISPR spacer
ccggcggtcgacatcgtccaggaccccgcggc	Protospacer
****************  ***** ...  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

269600 : 332709

Escherichia_phage(18.18%)

transposase,integrase,protease,tRNA,plate

attL 276645:276660|attR 334607:334622

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000949017.1\|269600_270953_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240936.1\|270984_273417_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758966.1\|273539_274025_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139265.1\|274028_275054_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210741.1\|275159_275615_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565950.1\|275618_276407_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000741216.1\|276406_277555_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
276645:276660	attL	NA	NA	NA	NA
WP_000569412.1\|277551_278148_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.5e-25	39.3
WP_001294820.1\|278171_281654_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	4.8e-209	36.9
WP_000055753.1\|281666_282626_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_000524168.1\|282805_284569_+	chitinase	NA	NA	NA	NA
WP_001021054.1\|284644_286786_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901086.1\|286841_287231_+	VOC family protein	NA	NA	NA	NA
WP_053445074.1\|287293_288586_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062330.1\|288669_288930_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000955207.1\|288916_289135_-	YaeP family protein	NA	NA	NA	NA
WP_053445073.1\|289314_289860_+	YaeQ family protein	NA	NA	NA	NA
WP_000560527.1\|289856_290279_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_023258106.1\|290310_291012_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_001260678.1\|291085_292804_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000093986.1\|292914_293622_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202315.1\|293618_294023_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874215.1\|294141_294957_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001287486.1\|294995_295649_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000594017.1\|295641_296673_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	4.2e-36	40.2
WP_001140158.1\|296862_297429_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000154871.1\|303636_304440_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	2.1e-38	35.4
WP_001808112.1\|304460_305375_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_053445570.1\|305479_306655_+	MFS transporter	NA	NA	NA	NA
WP_001230970.1\|306785_307586_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_053445571.1\|307663_308434_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644706.1\|308489_309857_-	murein transglycosylase D	A0A0A7NU10	Lactobacillus_phage	1.4e-10	33.0
WP_001052773.1\|309928_310684_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_000801238.1\|310718_311441_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917872.1\|311437_311905_-	ribonuclease HI	J9Q745	Salmonella_phage	4.7e-51	58.9
WP_001670675.1\|311968_312700_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	6.4e-39	39.9
WP_052944122.1\|313231_314287_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_000145244.1\|314297_315293_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_001353740.1\|317326_317566_+	DUF1819 family protein	NA	NA	NA	NA
WP_000777554.1\|319062_319536_+	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_000704156.1\|319630_320155_+	streptothricin N-acetyltransferase Sat2	E4ZFP7	Streptococcus_phage	4.2e-16	38.9
WP_001206315.1\|320212_321001_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_001444089.1\|321076_321574_+	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|321634_322006_+	hypothetical protein	NA	NA	NA	NA
WP_001271300.1\|322415_322793_+	hypothetical protein	NA	NA	NA	NA
WP_053445605.1\|323023_324595_-	hypothetical protein	NA	NA	NA	NA
WP_000255956.1\|324691_325714_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
WP_001317493.1\|325710_326493_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
WP_001243518.1\|326599_328126_-\|transposase	transposase	NA	NA	NA	NA
WP_001276994.1\|328128_329796_-	AAA family ATPase	NA	NA	NA	NA
WP_000267723.1\|329792_331901_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001029679.1\|331887_332709_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
334607:334622	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1233298 : 1240543

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000444508.1\|1233298_1234549_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_053445718.1\|1234744_1235203_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	3.2e-12	29.9
WP_080231419.1\|1235416_1236625_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-48	50.3
WP_053445637.1\|1236805_1237405_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.5e-97	83.4
WP_053445636.1\|1237401_1237596_+	hypothetical protein	S4TNP0	Salmonella_phage	1.8e-12	59.6
WP_053445635.1\|1237592_1237886_+	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	4.5e-36	78.3
WP_053445634.1\|1237895_1238258_+	antitermination protein	Q777W5	Enterobacteria_phage	2.3e-53	80.0
WP_001317493.1\|1238741_1239524_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
WP_000255956.1\|1239520_1240543_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1

DBSCAN-SWA_3

1640577 : 1661283

Salmonella_phage(27.27%)

transposase,integrase

attL 1639607:1639621|attR 1667643:1667657

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1639607:1639621	attL	NA	NA	NA	NA
WP_001138064.1\|1640577_1643544_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147567.1\|1643546_1644107_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_001067855.1\|1644406_1645111_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000845048.1\|1645613_1646627_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001456218.1\|1646793_1647636_+	alpha/beta fold putative hydrolase EstX	W8EKH7	Mycobacterium_phage	3.0e-08	26.1
WP_000050382.1\|1647731_1648340_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_001261740.1\|1648397_1649189_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000095725.1\|1649450_1650710_+	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
WP_001206316.1\|1650802_1651594_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000800531.1\|1651763_1652096_+	quaternary ammonium compound efflux SMR transporter QacL	E5E3Y9	Acinetobacter_phage	2.0e-08	35.3
WP_000034420.1\|1653275_1654067_-	sulfonamide-resistant dihydropteroate synthase Sul3	NA	NA	NA	NA
WP_001354008.1\|1654535_1654781_-	hypothetical protein	NA	NA	NA	NA
WP_000612791.1\|1654818_1655682_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_011264039.1\|1655827_1656067_-	macrolide transporter	NA	NA	NA	NA
WP_001067855.1\|1656139_1656844_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_085959879.1\|1657317_1658446_+\|transposase	IS3-like element IS1133 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-52	41.1
WP_001082319.1\|1658553_1659357_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|1659356_1660193_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_000845049.1\|1660164_1661283_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.5e-71	45.7
1667643:1667657	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1922483 : 1989146

Edwardsiella_phage(17.78%)

tail,lysis,transposase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094078611.1\|1922483_1923692_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-50	51.3
WP_053445591.1\|1924021_1924780_-	EAL domain-containing protein	NA	NA	NA	NA
WP_157727825.1\|1924896_1930224_-	hypothetical protein	NA	NA	NA	NA
WP_053445594.1\|1930303_1930783_-	hypothetical protein	NA	NA	NA	NA
WP_053445595.1\|1931281_1931719_-	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA
WP_000446778.1\|1931841_1932204_-	hypothetical protein	NA	NA	NA	NA
WP_137975613.1\|1935698_1937795_-	peptidase domain-containing ABC transporter	F2Y165	Organic_Lake_phycodnavirus	4.2e-14	25.5
WP_053445599.1\|1937803_1939093_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_053445598.1\|1939176_1939737_+	hypothetical protein	NA	NA	NA	NA
WP_053445597.1\|1940154_1940874_-	hypothetical protein	NA	NA	NA	NA
WP_053445596.1\|1940870_1941296_-	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA
WP_001317493.1\|1942826_1943609_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
WP_000255956.1\|1943605_1944628_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-199	99.1
WP_157727826.1\|1944786_1944936_+	hypothetical protein	NA	NA	NA	NA
WP_053445457.1\|1947123_1947879_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.9e-33	33.9
WP_053445458.1\|1949431_1949893_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.7e-66	74.8
WP_053445459.1\|1949885_1950887_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	4.9e-122	67.3
WP_053445461.1\|1954080_1955622_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_053445462.1\|1955690_1956545_-	protein YibB	NA	NA	NA	NA
WP_053445463.1\|1956695_1957265_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	7.1e-94	87.8
WP_053445464.1\|1957254_1958079_-\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.8e-154	96.0
WP_060598485.1\|1958075_1959530_-\|tail	tail fiber protein	E5G6P0	Salmonella_phage	1.4e-37	66.1
WP_001181747.1\|1959519_1960122_-	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	3.3e-33	38.9
WP_023257605.1\|1960123_1961365_-	hypothetical protein	A0A077KGW9	Edwardsiella_phage	1.2e-101	49.9
WP_001748483.1\|1961361_1961718_-	hypothetical protein	A0A077KCA1	Edwardsiella_phage	5.5e-20	49.1
WP_023257603.1\|1961730_1962408_-	hypothetical protein	A0A077KAY0	Edwardsiella_phage	5.4e-32	36.4
WP_053445466.1\|1962388_1963258_-	hypothetical protein	A0A077KC17	Edwardsiella_phage	1.2e-31	32.7
WP_000890115.1\|1963254_1963557_-	hypothetical protein	A0A077K9U4	Edwardsiella_phage	7.0e-24	49.5
WP_023219641.1\|1963556_1964267_-	hypothetical protein	A0A077KGW3	Edwardsiella_phage	6.5e-28	34.6
WP_053445467.1\|1964263_1966435_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	7.0e-49	66.4
WP_053445468.1\|1966418_1966601_-	hypothetical protein	NA	NA	NA	NA
WP_000101348.1\|1966642_1967047_-	hypothetical protein	H9C0W7	Aeromonas_phage	1.8e-19	44.8
WP_053445469.1\|1967046_1967493_-	hypothetical protein	Q2NPD1	Xanthomonas_phage	9.1e-20	39.7
WP_053445470.1\|1967493_1968978_-	DUF3383 domain-containing protein	A0A077KGV4	Edwardsiella_phage	4.0e-96	41.0
WP_000094504.1\|1968958_1969504_-	hypothetical protein	NA	NA	NA	NA
WP_001048637.1\|1969488_1969854_-	hypothetical protein	A0A077KAW7	Edwardsiella_phage	3.0e-21	40.5
WP_053445471.1\|1969850_1970435_-	hypothetical protein	H9C0W2	Aeromonas_phage	1.6e-16	30.1
WP_053445472.1\|1970428_1970884_-	DUF4054 domain-containing protein	A0A068CGG9	Acinetobacter_phage	4.8e-16	41.5
WP_053445473.1\|1970890_1971238_-	hypothetical protein	H9C0V9	Aeromonas_phage	3.9e-10	40.2
WP_053445474.1\|1971241_1972270_-	hypothetical protein	A0A219YBB0	Aeromonas_phage	1.0e-82	48.7
WP_001525451.1\|1972269_1972752_-	hypothetical protein	A0A1X9SFC3	Acinetobacter_phage	1.1e-26	48.8
WP_023220053.1\|1972753_1974100_-	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	4.2e-68	37.2
WP_000552017.1\|1974096_1974786_-\|head	head morphogenesis protein	H9C0V1	Aeromonas_phage	4.5e-58	49.6
WP_053445475.1\|1974826_1976347_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	1.4e-104	43.9
WP_023257592.1\|1976346_1977966_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	1.7e-262	81.6
WP_023257591.1\|1977968_1978598_-	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	2.5e-108	98.6
WP_001113128.1\|1978668_1978851_-	DUF826 domain-containing protein	NA	NA	NA	NA
WP_053445476.1\|1979077_1979542_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	3.7e-56	81.7
WP_053445477.1\|1979642_1980182_-	lysozyme	Q6H9V6	Enterobacteria_phage	2.8e-76	71.2
WP_001525456.1\|1980159_1980462_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_052938913.1\|1980980_1981517_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	3.5e-66	67.4
WP_052938933.1\|1981513_1981795_-	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	2.8e-35	78.0
WP_053445478.1\|1981982_1982420_-	NinB protein	G8C7V3	Escherichia_phage	1.8e-52	68.8
WP_053445479.1\|1982593_1982899_-	hypothetical protein	NA	NA	NA	NA
WP_157727827.1\|1983180_1983864_-	T3SS effector NleG family protein	B6DZB9	Enterobacteria_phage	5.3e-19	50.0
WP_047588288.1\|1984105_1984501_-	DUF977 family protein	A0A088CBK9	Shigella_phage	4.4e-18	38.5
WP_000788951.1\|1984518_1985271_-	ATP-binding protein	A0A088CBP4	Shigella_phage	1.7e-103	76.5
WP_053445480.1\|1985277_1986159_-	hypothetical protein	A0A088CD36	Shigella_phage	7.0e-32	58.5
WP_053445481.1\|1986203_1986698_-	hypothetical protein	NA	NA	NA	NA
WP_001033909.1\|1986684_1986939_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
WP_023165607.1\|1987035_1987461_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	9.3e-14	56.3
WP_071992601.1\|1987770_1987926_+	DUF1391 family protein	M4QQ57	Salicola_phage	8.0e-08	55.3
WP_137975606.1\|1988227_1988425_-	hypothetical protein	NA	NA	NA	NA
WP_053445482.1\|1988861_1989146_+	hypothetical protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2

DBSCAN-SWA_5

1992378 : 1998742

uncultured_Caudovirales_phage(28.57%)

integrase

attL 1996822:1996836|attR 2001758:2001772

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001534364.1\|1992378_1993209_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
WP_000070063.1\|1993243_1993477_+	hypothetical protein	S4TVX5	Salmonella_phage	3.3e-13	47.7
WP_053445484.1\|1993473_1994316_+	DNA adenine methylase	A0A0K1LM14	Caulobacter_phage	4.0e-69	49.8
WP_000276802.1\|1994303_1994483_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	4.3e-13	62.1
WP_053445485.1\|1994576_1994834_+	hypothetical protein	NA	NA	NA	NA
WP_053445486.1\|1994830_1996924_+	DNA methyltransferase	H9C171	Pectobacterium_phage	5.7e-197	51.6
1996822:1996836	attL	NA	NA	NA	NA
WP_001518052.1\|1997112_1997337_+	hypothetical protein	NA	NA	NA	NA
WP_038390080.1\|1997409_1997682_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	4.0e-10	39.7
WP_038390082.1\|1997662_1998742_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.5e-100	51.7
2001758:2001772	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2105410 : 2112643

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023232059.1\|2105410_2106841_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_000377042.1\|2106914_2107610_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_072161664.1\|2107689_2108001_-	hypothetical protein	NA	NA	NA	NA
WP_053445508.1\|2108650_2109829_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.2e-108	57.0
WP_024131163.1\|2110086_2110275_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2110285_2110498_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457658.1\|2110952_2112221_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.4e-227	92.2
WP_000394197.1\|2112223_2112643_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_7

2194591 : 2205098

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000126349.1\|2194591_2195905_-	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1
WP_000565903.1\|2195931_2197011_-	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
WP_000648785.1\|2197015_2197789_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_053445039.1\|2197804_2198779_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_072161618.1\|2198784_2199336_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000857529.1\|2199336_2200215_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_001023662.1\|2200262_2201162_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000697846.1\|2201161_2202247_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
WP_000981469.1\|2202623_2203517_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_053445037.1\|2203694_2205098_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.8e-21	26.5

DBSCAN-SWA_8

2273157 : 2282328

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195335.1\|2273157_2275191_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703137.1\|2275431_2275890_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_001197951.1\|2276061_2276592_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950422.1\|2276648_2277116_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.1e-73	89.7
WP_000598637.1\|2277162_2277882_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272845.1\|2277878_2279564_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_001240418.1\|2279786_2280518_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|2280577_2280685_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|2280665_2281397_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|2281380_2282328_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2

DBSCAN-SWA_9

2752138 : 2855694

Salmonella_phage(72.73%)

portal,terminase,integrase,transposase,plate,capsid,head,lysis,tRNA,tail

attL 2763304:2763319|attR 2856120:2856135

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053445211.1\|2752138_2752876_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219174.1\|2753005_2754340_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_077248476.1\|2754357_2755257_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000188415.1\|2755359_2755947_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627811.1\|2756008_2756392_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000179978.1\|2756710_2757400_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000997368.1\|2757515_2758553_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098732.1\|2758756_2759176_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
WP_000183642.1\|2759248_2759929_+	DTW domain-containing protein	NA	NA	NA	NA
WP_000082637.1\|2759982_2762643_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949286.1\|2762757_2764113_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
2763304:2763319	attL	NA	NA	NA	NA
WP_053445213.1\|2764157_2764481_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000807818.1\|2764477_2765779_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.2e-43	30.4
WP_053445214.1\|2765882_2766338_-	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.0e-34	50.0
WP_001235094.1\|2772506_2775080_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	9.0e-128	35.6
WP_053444919.1\|2775209_2775941_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079130.1\|2775937_2776918_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197660.1\|2777049_2777787_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178449.1\|2778058_2778397_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_010989056.1\|2778500_2778548_+	hypothetical protein	NA	NA	NA	NA
WP_000200080.1\|2778647_2779808_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_053444918.1\|2779768_2780677_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000225188.1\|2780734_2781856_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168062.1\|2781865_2782936_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_001212379.1\|2783375_2783894_+	YfiR family protein	NA	NA	NA	NA
WP_053444917.1\|2783886_2785107_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	1.7e-07	37.0
WP_000065257.1\|2785263_2785611_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000469807.1\|2785651_2786419_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043266.1\|2786463_2787012_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256453.1\|2787030_2787279_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460052.1\|2787531_2788893_-	signal recognition particle protein	NA	NA	NA	NA
WP_001537507.1\|2789058_2789850_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_127908301.1\|2789869_2791156_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_053444916.1\|2791285_2791891_+	hypothetical protein	NA	NA	NA	NA
WP_001518875.1\|2791931_2792522_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059155.1\|2792644_2793523_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880965.1\|2793608_2795270_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203445.1\|2795418_2795757_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001112990.1\|2795922_2796213_-	RnfH family protein	NA	NA	NA	NA
WP_000242603.1\|2796202_2796679_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001518569.1\|2796828_2797311_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_053444915.1\|2797925_2809400_+	biofilm-associated protein BapA	NA	NA	NA	NA
WP_053444914.1\|2809464_2810874_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_000196135.1\|2810870_2813051_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0
WP_072102794.1\|2813058_2814222_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_023232928.1\|2814726_2815317_-	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	2.3e-47	76.7
WP_000972388.1\|2815601_2815820_-	hypothetical protein	Q53ZE7	Salmonella_virus	8.3e-27	76.4
WP_023232927.1\|2815886_2816987_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.3e-189	97.3
WP_000980409.1\|2816983_2817469_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	99.2
WP_053444913.1\|2817465_2820273_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	98.8
WP_000763317.1\|2820265_2820385_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.8e-15	97.4
WP_001280967.1\|2820399_2820702_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
WP_001207650.1\|2820756_2821272_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.3e-91	98.8
WP_000046109.1\|2821281_2822454_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
WP_001165558.1\|2822556_2823114_-	serine-type DNA invertase Fin	A0A1S6L009	Salmonella_phage	5.5e-99	98.4
WP_080186706.1\|2823083_2824010_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	2.3e-158	98.6
WP_053444904.1\|2824012_2824552_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	5.5e-96	97.8
WP_077248486.1\|2824555_2825173_-\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	1.3e-109	96.4
WP_080186707.1\|2825142_2826717_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	8.7e-158	61.3
WP_010835366.1\|2826713_2827319_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.4e-118	99.5
WP_053444902.1\|2827311_2828220_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	4.2e-157	98.3
WP_023225974.1\|2828206_2828566_-\|plate,tail	base plate tail-like protein	E5G6N7	Salmonella_phage	6.1e-59	98.3
WP_000993749.1\|2828562_2829141_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.9e-108	99.5
WP_023232918.1\|2829209_2829656_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	7.6e-67	91.1
WP_053444901.1\|2829648_2830080_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	5.6e-75	98.6
WP_053444900.1\|2830175_2830604_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	2.1e-58	87.1
WP_053444899.1\|2830600_2831116_-	lysozyme	E5G6N1	Salmonella_phage	2.4e-72	75.9
WP_014884902.1\|2831096_2831312_-	hypothetical protein	E5G6N0	Salmonella_phage	2.0e-20	66.2
WP_000868184.1\|2831315_2831519_-\|tail	tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
WP_014884903.1\|2831518_2831986_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.3e-48	58.7
WP_006777754.1\|2832084_2832738_-\|terminase	Small terminase subunit	E5G6M7	Salmonella_phage	5.2e-56	56.1
WP_053444898.1\|2832741_2833890_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	3.5e-132	68.8
WP_053444897.1\|2833905_2834733_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.6e-73	67.6
WP_017382378.1\|2834882_2836646_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	3.2e-312	87.7
WP_053444896.1\|2836645_2837695_+\|portal	phage portal protein	E5G6M3	Salmonella_phage	9.2e-156	79.1
WP_053444895.1\|2837803_2838523_-	RloB domain-containing protein	NA	NA	NA	NA
WP_053444894.1\|2838524_2839790_-	ATP-binding protein	NA	NA	NA	NA
WP_000508501.1\|2840205_2841207_+	hypothetical protein	NA	NA	NA	NA
WP_001085272.1\|2841206_2842286_+	hypothetical protein	NA	NA	NA	NA
WP_047079042.1\|2842272_2842956_+	hypothetical protein	NA	NA	NA	NA
WP_001217570.1\|2843051_2843285_-	DinI family protein	A0A1S6L014	Salmonella_phage	1.3e-33	93.5
WP_048977490.1\|2843296_2843485_-	hypothetical protein	A0A1S6L006	Salmonella_phage	1.4e-25	96.8
WP_053444893.1\|2843646_2846055_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	96.5
WP_053444892.1\|2846045_2846903_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	4.6e-129	80.4
WP_000785509.1\|2846899_2847127_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.3e-35	93.3
WP_001244234.1\|2847126_2847360_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	2.0e-26	84.4
WP_000963195.1\|2847427_2847769_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.2e-49	85.0
WP_000166366.1\|2847988_2848447_+	hypothetical protein	NA	NA	NA	NA
WP_053444891.1\|2848394_2848628_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-12	60.6
WP_053444890.1\|2848635_2849145_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	3.6e-89	99.4
WP_000102104.1\|2849180_2849420_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
WP_000052560.1\|2849536_2850169_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-66	58.6
WP_001536726.1\|2850172_2851198_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	9.9e-203	100.0
WP_053444889.1\|2851564_2852809_+\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	1.7e-100	47.1
WP_053444888.1\|2853150_2854014_+	hypothetical protein	NA	NA	NA	NA
WP_053444887.1\|2853997_2854426_+	hypothetical protein	NA	NA	NA	NA
WP_094078614.1\|2854582_2855694_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.9e-06	25.0
2856120:2856135	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020493

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP020492

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection