CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022351	Klebsiella michiganensis strain K516 plasmid pK516_NDM5, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP022350	Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP022348	Klebsiella michiganensis strain K516 chromosome, complete genome	2 crisprs	cas3,WYL,DEDDh,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	1	12	13	2
NZ_CP022349	Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence	1 crisprs	NA	0	2	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022349_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022349_1

42987-43155

Orphan

Consensus_repeat	Method
ATAATTAAATCATGATTTAATG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP022349_1

>merge|NZ_CP022349|1|42987-43155|PILER-CR
ATAATTAAATCATGATTTCATTTATTTTTATGCTATTGTAATTTAAGTCATTATTGTTTTGCATGTTTTACTGAAATCATTAAATCATGATTTAATGTTGTTCCTTTACCTCAGCTATGTCATAGTTAGCTTAGTTGTAGAACTTGATAATGAAATCATGATTTAATGA

>NZ_CP022349|1|1|42987-43155|PILER-CR
ATAATTAAATCATGATTTCATTT	ATTTTTATGCTATTGTAATTTAAGTCATTATTGTTTTGCATGTTTTACTGAAATCAT
TAAATCATGATTTAATGTTGTTC	CTTTACCTCAGCTATGTCATAGTTAGCTTAGTTGTAGAACTTGATAATG
AAATCATGATTTAATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022349.1\|WP_088903441.1\|32507_32771_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022349.1\|WP_020314652.1\|44239_45514_-\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|179607
NZ_CP022349.1\|WP_020314635.1\|45971_46217_-\|DinI-like-family-protein	unknown	unknown	gnl\|CDD\|368780
NZ_CP022349.1\|WP_020314639.1\|31429_32383_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|227751
NZ_CP022349.1\|WP_020314631.1\|46420_46651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022349.1\|WP_088903438.1\|47085_47709_+\|DNA-methylase	unknown	unknown	gnl\|CDD\|184255
NZ_CP022349.1\|WP_022644718.1\|43166_43793_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP022349.1\|WP_000509966.1\|50697_51303_+\|DNA-resolvase	unknown	unknown	gnl\|CDD\|214861
NZ_CP022349.1\|WP_020314636.1\|45525_45939_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP022349.1\|WP_023307208.1\|47705_50603_-\|Tn3-like-element-Tn5403-family-transposase	unknown	unknown	gnl\|CDD\|376561
NZ_CP022349.1\|WP_020314642.1\|32790_33411_-\|resolvase	unknown	unknown	gnl\|CDD\|239736
NZ_CP022349.1\|WP_100248964.1\|36507_37673_+\|IS3-like-element-ISKpn37-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP022349.1\|WP_075606932.1\|38035_40789_+\|ABC-transporter	unknown	unknown	gnl\|CDD\|213993
NZ_CP022349.1\|WP_088903439.1\|41743_42262_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022349.1\|WP_032635043.1\|40894_41491_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|224872
NZ_CP022349.1\|WP_075606933.1\|33789_35223_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|236696
NZ_CP022349.1\|WP_004194048.1\|51962_53144_+\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|236568
NZ_CP022349.1\|WP_020314634.1\|43837_44065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022349.1\|WP_088903440.1\|35257_36454_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|370247
NZ_CP022349.1\|WP_020804876.1\|30821_31433_+\|DUF2913-family-protein	unknown	unknown	gnl\|CDD\|371392

Protein	Function_ID	Function_description	E-value
NZ_CP022349.1\|WP_020314652.1\|44239_45514_-\|Y-family-DNA-polymerase	gnl\|CDD\|179607	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC.	0
NZ_CP022349.1\|WP_020314635.1\|45971_46217_-\|DinI-like-family-protein	gnl\|CDD\|368780	pfam06183, DinI, DinI-like family. This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity. The structure of DinI is known.	2.94757e-08
NZ_CP022349.1\|WP_020314639.1\|31429_32383_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|227751	COG5464, COG5464, Uncharacterized conserved protein [Function unknown].	2.6724e-120
NZ_CP022349.1\|WP_088903438.1\|47085_47709_+\|DNA-methylase	gnl\|CDD\|184255	PRK13699, PRK13699, putative methylase; Provisional.	1.8647e-130
NZ_CP022349.1\|WP_022644718.1\|43166_43793_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.14227e-14
NZ_CP022349.1\|WP_020314636.1\|45525_45939_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	7.83274e-56
NZ_CP022349.1\|WP_023307208.1\|47705_50603_-\|Tn3-like-element-Tn5403-family-transposase	gnl\|CDD\|376561	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases.	2.76395e-154
NZ_CP022349.1\|WP_020314642.1\|32790_33411_-\|resolvase	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	1.67235e-69
NZ_CP022349.1\|WP_100248964.1\|36507_37673_+\|IS3-like-element-ISKpn37-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	6.21435e-72
NZ_CP022349.1\|WP_075606932.1\|38035_40789_+\|ABC-transporter	gnl\|CDD\|213993	cd07438, PHP_HisPPase_AMP, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase (HisPPase) AMP bound. The PHP domain of this HisPPase family has an unknown function. It has a second domain inserted in the middle that binds adenosine 5-monophosphate (AMP). The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to give histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to the other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	8.7781e-08
NZ_CP022349.1\|WP_032635043.1\|40894_41491_-\|recombinase-family-protein	gnl\|CDD\|224872	COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair].	3.46046e-44
NZ_CP022349.1\|WP_075606933.1\|33789_35223_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|236696	PRK10458, PRK10458, DNA cytosine methylase; Provisional.	0
NZ_CP022349.1\|WP_004194048.1\|51962_53144_+\|Na+/H+-antiporter-NhaA	gnl\|CDD\|236568	PRK09560, nhaA, pH-dependent sodium/proton antiporter; Reviewed.	0
NZ_CP022349.1\|WP_000509966.1\|50697_51303_+\|DNA-resolvase	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.27203e-44
NZ_CP022349.1\|WP_088903440.1\|35257_36454_-\|restriction-endonuclease	gnl\|CDD\|370247	pfam09019, EcoRII-C, EcoRII C terminal. The C-terminal catalytic domain of the Restriction Endonuclease EcoRII has a restriction endonuclease-like fold with a central five-stranded mixed beta-sheet surrounded on both sides by alpha-helices. It cleaves DNA specifically at single 5' CCWGG sites.	7.23048e-92
NZ_CP022349.1\|WP_020804876.1\|30821_31433_+\|DUF2913-family-protein	gnl\|CDD\|371392	pfam11140, DUF2913, Protein of unknown function (DUF2913). This family of proteins with unknown function appear to be restricted to Gammaproteobacteria.	3.06729e-14

>NZ_CP022349.1|WP_088903439.1|41743_42262_-|hypothetical-protein
MYVKPTDVLSPRGHVEVLDVLYDAGEWDVSVARINYRDELNQPFSECTGIRWNGNLDEGSKGMPLSRGYPVWFVIPKEFAACIQARALELNTDNIPAVIAEIKMKVESERASNPNTNMLEYKTARQLSETDVDAILGGLKDVGIFEAFTEGAHTIDINGVHTLMLMFPAKRK
>NZ_CP022349.1|WP_032635043.1|40894_41491_-|recombinase-family-protein
MSRVFAYCRVSTLEQNTENQRREIEAAGFSIRPQRLIEEYISGSVAAAERPGFMRLLDRMENGDVLIVTKLDRLGRNAMDIRKTVELLSASEIRVHCLALGGVDLTSPAGKMTMQVISAVAEFERDLLLERTHAGIARAKASGKRFGRPPALDDEQKKAVFLRLSEGKSISAIAREFDTTRQTILRVKAIMEDADARS
>NZ_CP022349.1|WP_075606932.1|38035_40789_+|ABC-transporter
MNWIGSRWWKFDFHNHTPASDDYGKGPNQAQYMQITHKDWLLNYMRQGIDCVAVTDHNSGAWIDPLKHALKELASESHEDYRPLYLFPGVELTVQGNIHILAIFGEDKTTSDIDSLLGAVRYRATKGKSDGCSECSAVEVIDEIARSGGLAIPAHVDQVSGLFTVCTGNTLEQVLDNKCVFAMEVTDLAKAKPQLYISKNLNWAEILGTDSHHPSGTGNQRYPGSHFTWVKMSEPSYDGLRLALIDGALSLKRSDNFTGDPNIHGQLAIESIVVDDAKYLGRGQSLSCQLNPWLNTIIGGRGTGKSTSLEFLRIALKRKGEIPKSLEKEFTKYSQTSKDRQDEGLLKDSTKITVGFRKDGGRFRITWSNTDDIYSIEEETAPGVWCASEGDIAQRFPVRIYSQKQIFELAKHPQALLQVVDDAAVVNHRDWQLKWDELVSKYFSLRAQEREVQTGLQEESVTKGQLEDVKRKLDVFEKAGHADVLKAYQLRQNQSKAMDSWVTTWEGSAEQVRDISGRLLPAELDLQYFDIGNADDKELFDTIKGIRATFEKLQTEMNSIAQRIDDVKNSWNQTRSDLGISKRITAASHEYTGLLGQLSAADAGDPSAYGVLVKQRQDFEDKLKGFDKKRETLAQHQKSAEEYLVKLHEHRALITKLREDFLKDTLVGNSYVQINVIPFGNKLTVEEEFRNLIGRSSGGFDRDIGVVDGDEGLLAYLTQDQSNTMDDKIEKIKSSLLAIHENDTVAVDSCKDRRFVSHIQGLTPEQIDRIQCWFPGDSLDIRYSLKNGESFKPVEQGSPGQKTAALLAFILSYGNEPLILDQPEDDLDNHLIYDLIVTQLREIKQKRQVLVVTHNANIVVNGDAENVIALDIRSGQTRIVTQGGLQEPSIRDEICRVMEGGREAFTQRYKRINAAIT
>NZ_CP022349.1|WP_100248964.1|36507_37673_+|IS3-like-element-ISKpn37-family-transposase
MIKTRRTKRTFSPEFKLEAIEQVVKYQRDVREVALALELNPDHLRKWIRLYKQELQGIEPAGNAITPEQREIQQLKARIKRLEMEKEIPKAGCRADERNPREAVALITRLKAKWPVRVLCHLFGIHRSVYYAQVKRPVNVQRIELRSRVRAFHALSRGAAGSRAISQMLRQSGVDAGRWLARRLMRECGLTSRQPVKHHYRVNEDKSPPLPNLLNRQFNPAAPNRVWCGDISFIRLQDKWCYLALVVDLYSRRIIGSALSLTADAELVCRALRNALETRPRDGRLLFHSDQGVQYKSNKYRKLLWRYGVMQSMSRRGNCLDNSPMERVFRSLKSEWLPKGGYGDFSHSVRDINQWINGYYNVYRPHTNNDGLPPCLHEEKWKQIIPVS
>NZ_CP022349.1|WP_088903440.1|35257_36454_-|restriction-endonuclease
MTDPLQIAGGNYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFITAHVSSHDCPDSEARAIYYNSRHFGKTRNEKRITRWGRGSPLQDPENTGALTLLAFRLNEHGGDSTAVDIWVCVSPDEEDIIETAIGEVIPGTLISGAAGRILGGLSLQQMPVNHKYTIPEDWQQRFPSGNEIIEYAAGHYVKNSLNPDEQLIDRRRVEYDIFLLVEELHVLDIIRKGFGSVDEFIALANSVSNRRKSRAGKSLELHLEHLFIEHGLRHFATQAVTEGNKKPDFLFPSAEAYHDAEFPAENLRMLAVKTTCKDRWRQILNEANRISPVHLFTLQEGVSQAQYREMQAEGVRLVVPSSIHKKYPEAVRAELMTLGAFIAELTGLYADLA
>NZ_CP022349.1|WP_075606933.1|33789_35223_+|DNA-cytosine-methyltransferase
MSEFELLAQDLLEKAEIDEKLRQENDKKLIEQVLEIYDQKYVAELLRKVGKNEWTRETLNRWINGKCSPKSLTSAEEALLRKMLPEAPAHHPDYAFRFIDLFAGIGGIRKGFEAIGGQCVFTSEWNKEAVRTYKANWFNDEQAHTFNLDIREVTLSDKPEVPETDAYAYIDEHVPDHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFECEAQGTLFFDVARIIRAKKPAVFVLENVKNLKSHDKGKTFKVIMETLDELGYEVADAADMGKSDPKVIDGKHFLPQHRERIVLVGFRRDLNIHQGFTLRDVSRFYPEQRPSFGELLEPVVDSKYILTPKLWEYLYNYAKKHAAKGNGFGFGLVNPENRESVARTLSARYHKDGSEILIDRGWDMATGETDFANEENQAHRPRRLTPRECARLMGFEKPDGRPFRIPVSDTQSYRQFGNSVVVPVFEAVARLLEPYILKAVSAGAGKVDNI
>NZ_CP022349.1|WP_020314642.1|32790_33411_-|resolvase
MFVFGYLRASTSEQDASRAKNVLKAFANQHGHRIAGWYIDNVSGTTMNRPELIRLLGDAEPGDVILIEQVDRLTRLDDAGWETLRKQITDKQLAIVSLDLPTSYLALSSTVSDDFTRSMLKAVNGMMLDMLAAIARKDYEDRRRRQSEGISKAKAEGKYRGRVADAQKHELIRTLRLVNGKSLRETARLAGVSKMTVIRVCSSADK
>NZ_CP022349.1|WP_088903441.1|32507_32771_-|hypothetical-protein
MKTKKIPLVIYTVIVAGLTILGTRLYDSVSDTTDPAIANGPFWAGLCVKTDSKDGMNELICSNIRIFVKAEDYDRSVRKRELSGIPE
>NZ_CP022349.1|WP_020314639.1|31429_32383_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKKKNSTPTPHDATFRQFLTQPDIARDFMELHLPAELQAICDLSTLKLESGSFIEDDLRQYFSDVLYSLKTTAGDGYVHVLIEHQSSPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDPILAGTLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVVSLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQQGIEQGIQLGEQRGIEKGEREATLKIARTMLQNGIDRNTVMKVTGLTEEDLAQIRH
>NZ_CP022349.1|WP_020804876.1|30821_31433_+|DUF2913-family-protein
MALTHKTGHLAWCALVALALARKEQGELSPAQENLFLTRWLATALKQRRFPRDVTPDIEWLLNQGRLLGVRAKLADKLDYVWRSCSGELTEQNDMFRLTYALETAKDMGWNYRVMSDREWAGRYALVLNPGVNGVYLLRTNLDAAFDDNGQQTNPLTARLTGSVAGVMKLLNRCGWQAEPESGASLPHQYSLMAGQGVPGKGD
>NZ_CP022349.1|WP_022644718.1|43166_43793_+|ParA-family-protein
MGKVISIVGQKGGGSKSTEARTLAVGFSEAGWKTHLADIDTKQQTSLKWTERREKSGLSPIDCALYRRVETAVRMKDSCHLLIIDGRPAAETTSLDVADESDLVIITTGTTIDDLEPSLELARELIKKGIDKSKIVFIVSKSPSQSQGEKAQETIKAWGYKVINTVIPFKTSYGEALDTGRALHETPFKSLNETAKQMIEEIHDIINS
>NZ_CP022349.1|WP_020314634.1|43837_44065_+|hypothetical-protein
MKGPGKSIKIEPPKEDEPTLDVTGKGAVPDSAVKPIQIKVPVSKHKEMKAYAAEQGISMTDMLLAGYDMYRNKMK
>NZ_CP022349.1|WP_020314652.1|44239_45514_-|Y-family-DNA-polymerase
MFALADVNSFYASCEKVFRPDLRDRPVIVLSNNDGCVIARSREARAIGIPMGAPWFKVKGLAEKHNVAVFSSNYSLYHSMSERVMRCLEALAPRVEQYSIDEMFLDVAGIDNCVDFEDFGRQLREYVHRHTALTIGVGMGPSKTLAKSAQWASKEWPQFGGVLALTPDNPRRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPAFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERITEYDAMRQAVCQYAERAAEKLRSERQYCRHIAVFVKTSPFAVKEPYYGNMASESLPFPSRDSRDIIAAAVRALGRIWVPEHRYAKAGVMLNDFTPAGVSQLSLFDDVQPRANSEALMNVVDGINHSGLGKVWFAGRGIAPDWQMKRDLLSPAYTTRWADIPSARLC
>NZ_CP022349.1|WP_020314636.1|45525_45939_-|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MFTLPATPSSLQLPLFADACAAGFPSPAGDYVEQELDLNSLCIRHPAATYFLRASGESMKDLGLYDGDILVVDRSETAVDGDVVIAEVDGGFTVKRLRLHPRPALEPMNPAYPTLWPEELTLFGVVMHFIHRTRARL
>NZ_CP022349.1|WP_020314635.1|45971_46217_-|DinI-like-family-protein
MLQISVRFSPEQVKAMRSGTFAALQQEIERRLTPRYPQLWLNIGKSSQTALDVSGARSDKEKSDIMNTLEAIWQDDTWLPE
>NZ_CP022349.1|WP_020314631.1|46420_46651_+|hypothetical-protein
MSPVFRNALRFAGVPVDSSEPVRRQYGSRMIGIVTVCLLPLLVFDVPLWVFVLSQVIWGAGVYIGLSVAGDKSRNR
>NZ_CP022349.1|WP_088903438.1|47085_47709_+|DNA-methylase
MSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRSGRSIAGDKTDEWLAPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKTYASNRRNAKDRRGFVDYRHEGAYVLAKGRPVPPLRPLPDVMPFPYTGNPLHPNQKPVEALQPLIESFSAPGAIVLDPFAGSASTCVAAYRAGRRYMGSVPAEGEMTP
>NZ_CP022349.1|WP_023307208.1|47705_50603_-|Tn3-like-element-Tn5403-family-transposase
MSRRHIFTERQRAALFDLPTDELSLLKFYTLGDDDLENIRQRRRPENRIGFALQLCALRYPGRALAPGEMIPREVLSFVGAQLGVPADALLTYATRRQTRQQHMDTLREIYGYKTFTGRGARDLREWTFGQAEDARSNEDLAHRFIVRCRETSTILPAVSTIERLCADALVAAERRIETRIAENLTADVRDHLDKLLSEMLAGNISRFIWLRNFEVGNNSAAANRLLDRLEFLRTLNINHSALASIPAHRIARLRRQGERYFTDGLRDITSDRRWAILAVCVVEWEAAIADAIVETHDRIVGKTWREAKRQHDETISGSKATLTDTIRTFTALGASLLEARSDGTPLEMAVASSVAWDRLAQLVATGTQLSNTLADEPLAYVGQGYHRFRRYAPRMLRCLKLEAAPVAGPLVAAALSIGEMKGVASPERRFLRPSSKWNRHLRAQEKGDTRLWEVAVLFHLRDAFRSGDVWLAHSRRYGDLKQVLVPMIAAQENAKLAVPSNPQDWLADRKARLTIALKRLARAARNGTIPHGSIEDGTLRIDRLTADVPDGAEALILDLYRRMPSVRITDMLLEVDAALGFTDAFTHLRTGAPCRDRIGLLNVLLAEGLNLGLRKMAEATNTHDYWQLSRLARWHVESEAMNQALAIVVAAQGKLPMSRVWGMGTSASSDGQFFPTARHGEVMNMVNAKYGSVPGLKAYTHVSDQFAPFACQSIPATVSEAPYILDGLLMNEVGRHVREQYADTAGFTDHLFGASSLLGYNLVLRIRDLPSKRLYVFNPDTTPRELRKLVGGKAREDLIVANWPDIFRCAATMTAGKIRPSQLLRKLASYPRQNNLAVALREVGRIERTLFIIEWILDTDMQRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHYRIAGLNLLTAVIIYWNTVHLGHAVTERRNEGLDVPPEFLPHISPLGWAHILLTGEYLWPKEPKA
>NZ_CP022349.1|WP_000509966.1|50697_51303_+|DNA-resolvase
MGHRAAIYCRVSTADQSCERQEFDLRAFAGRAGYDVVGIFKETGSGTKLDRAERKKVLALAQSRQIDAILVTELSRWGRSTLDLLNTLRELENWKVSVIAMNGMAFDLSSPYGRMLATFLSGIAEFERDLISERVKSGLAVAKARGKRLGRQAGVRPKSDRLLPKVVAMRAEGRSYRWIARELGISKNTVADIVQRHRANA
>NZ_CP022349.1|WP_004194048.1|51962_53144_+|Na+/H+-antiporter-NhaA
MTENPIGLTRKVIKPVSNFFSSPVAGGIVLIIASAAAIIVANSPLREGYETLLKYKTAGLSVEHWINDALMAVFFMMVGLEIKRELVTGQLATWSQRALPGFAALGGLAVPALIYVGFNAGHDETLSGWAIPAATDIAFALGVLALLGSRVPVSLKIFLSALAILDDMGAVAIIALFYTSNISLLMLGGAAAMVALLFSLNRAGVTRLLPYLLTGGVLWFFMLQSGVHATVAGILLAFFIPLRTRNAADEVPLDRLEHAINPWVTFMILPLFGFANAGVALSGMTMNDLLSPVPVGVALGLFLGKQAGIFGLSLLAVSLGLAKRPEKSTWLQVYGVSVLCGIGFTMSLFIGNLAFTGSPLLVDEVKVGVLAGSILAALAGILILRFAPSKQVR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP021753	Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence	112606-112662	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	CP052165	Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence	15773-15829	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	CP052160	Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence	52062-52118	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	CP052145	Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence	16181-16237	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP008791	Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence	176746-176802	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP025040	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence	79461-79517	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP022275	Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence	61191-61247	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	MN891677	Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence	51326-51382	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	MN891679	Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence	32331-32387	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP027614	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence	13684-13740	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP022349	Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence	43005-43061	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	KY940546	Klebsiella pneumoniae plasmid pUCLA3, complete sequence	29736-29792	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP021545	Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence	79808-79864	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP006922	Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence	8165-8221	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP020064	Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence	75854-75910	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP038275	Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence	99886-99942	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	68227-68283	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	CP052205	Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence	105904-105960	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP023186	Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence	22497-22553	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_CP026717	Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence	64587-64643	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	NZ_MF788069	Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence	43995-44051	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	MT108213	Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence	30012-30068	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP021753	Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence	112685-112733	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	CP052165	Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence	15702-15750	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	CP052160	Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence	52141-52189	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	CP052145	Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence	16260-16308	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP008791	Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence	176825-176873	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP025040	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence	79540-79588	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP022275	Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence	61120-61168	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	MN891677	Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence	51405-51453	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	MN891679	Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence	32260-32308	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP017590	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ09, complete sequence	107476-107524	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP027614	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence	13763-13811	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP022349	Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence	43084-43132	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	KY940546	Klebsiella pneumoniae plasmid pUCLA3, complete sequence	29815-29863	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP021545	Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence	79887-79935	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP006922	Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence	8244-8292	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP020064	Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence	75783-75831	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP038275	Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence	99815-99863	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	CP050170	Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence	27143-27191	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	68306-68354	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	CP052205	Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence	105983-106031	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP023186	Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence	22426-22474	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_CP026717	Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence	64516-64564	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	NZ_MF788069	Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence	44074-44122	0	1.0
NZ_CP022349_1	1.2\|43090\|49\|NZ_CP022349\|PILER-CR	43090-43138	49	MT108213	Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence	29941-29989	0	1.0
NZ_CP022349_1	1.1\|43010\|57\|NZ_CP022349\|PILER-CR	43010-43066	57	CP050170	Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence	27214-27270	1	0.982

1. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP021753 (Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

2. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to CP052165 (Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

3. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to CP052160 (Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

4. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to CP052145 (Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

5. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP008791 (Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

6. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP025040 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

7. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP022275 (Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

8. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to MN891677 (Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

9. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to MN891679 (Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

10. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP027614 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

11. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP022349 (Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

12. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to KY940546 (Klebsiella pneumoniae plasmid pUCLA3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

13. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP021545 (Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

14. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP006922 (Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

15. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP020064 (Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

16. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP038275 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

17. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP021857 (Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

18. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to CP052205 (Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

19. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP023186 (Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

20. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_CP026717 (Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

21. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to NZ_MF788069 (Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

22. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to MT108213 (Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
*********************************************************

23. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP021753 (Klebsiella pneumoniae strain AR_0113 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

24. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to CP052165 (Klebsiella pneumoniae strain F16KP0082 plasmid pF16KP0082-3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

25. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to CP052160 (Klebsiella pneumoniae strain F16KP0084 plasmid pF16KP0084-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

26. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to CP052145 (Klebsiella pneumoniae strain F17KP0012 plasmid pF17KP0012-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

27. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP008791 (Klebsiella oxytoca KONIH1 plasmid pKPC-727, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

28. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP025040 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

29. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP022275 (Citrobacter freundii strain 18-1 plasmid pBKPC18-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

30. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to MN891677 (Klebsiella pneumoniae strain ZZ41 plasmid pZZ41-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

31. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to MN891679 (Klebsiella pneumoniae strain ZZ40 plasmid pZZ40-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

32. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP017590 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ09, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

33. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP027614 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

34. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP022349 (Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

35. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to KY940546 (Klebsiella pneumoniae plasmid pUCLA3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

36. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP021545 (Klebsiella pneumoniae strain AR_0112 plasmid tig00000001, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

37. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP006922 (Klebsiella pneumoniae 30684/NJST258_2 plasmid pNJST258C1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

38. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP020064 (Klebsiella pneumoniae strain AR_0117 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

39. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP038275 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-101716, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

40. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to CP050170 (Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

41. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP021857 (Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

42. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to CP052205 (Klebsiella pneumoniae strain F16KP0002 plasmid pF16KP0002-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

43. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP023186 (Klebsiella michiganensis strain K518 plasmid pK518_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

44. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_CP026717 (Klebsiella oxytoca strain AR_0028 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

45. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to NZ_MF788069 (Raoultella ornithinolytica strain 23141 plasmid p23141-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

46. spacer 1.2|43090|49|NZ_CP022349|PILER-CR matches to MT108213 (Klebsiella pneumoniae strain ZZ100 plasmid pZZ100-KPC, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	CRISPR spacer
ttgttcctttacctcagctatgtcatagttagcttagttgtagaacttg	Protospacer
*************************************************

47. spacer 1.1|43010|57|NZ_CP022349|PILER-CR matches to CP050170 (Klebsiella pneumoniae plasmid Carbapenemase(KPC-2)_IncFII, complete sequence) position: , mismatch: 1, identity: 0.982

catttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	CRISPR spacer
aatttatttttatgctattgtaatttaagtcattattgttttgcatgttttactgaa	Protospacer
 ********************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23814 : 65629

Salmonella_phage(15.0%)

transposase,integrase

attL 53513:53528|attR 67616:67631

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004199234.1\|23814_24696_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_013213985.1\|24971_25952_-\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
WP_001217881.1\|26074_26632_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_001143760.1\|26794_29800_+\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	100.0
WP_088903446.1\|29846_30188_+	restriction endonuclease	NA	NA	NA	NA
WP_020314648.1\|30225_30504_+	hypothetical protein	NA	NA	NA	NA
WP_020804876.1\|30821_31433_+	DUF2913 family protein	NA	NA	NA	NA
WP_020314639.1\|31429_32383_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	9.5e-75	57.1
WP_088903441.1\|32507_32771_-	hypothetical protein	NA	NA	NA	NA
WP_020314642.1\|32790_33411_-	resolvase	A0A219Y912	Aeromonas_phage	1.0e-08	31.0
WP_075606933.1\|33789_35223_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	8.3e-107	51.8
WP_088903440.1\|35257_36454_-	restriction endonuclease	E5E3X4	Burkholderia_phage	4.6e-34	41.9
WP_100248964.1\|36507_37672_+\|transposase	IS3-like element ISKpn37 family transposase	Q716C2	Shigella_phage	1.3e-73	48.0
WP_075606932.1\|38035_40789_+	ABC transporter	NA	NA	NA	NA
WP_032635043.1\|40894_41491_-	recombinase family protein	A0A219YA40	Aeromonas_phage	1.8e-23	37.2
WP_088903439.1\|41743_42262_-	hypothetical protein	NA	NA	NA	NA
WP_022644718.1\|43166_43793_+	ParA family protein	A0A2H4EW66	Aeromonas_phage	4.5e-25	34.4
WP_020314634.1\|43837_44065_+	hypothetical protein	NA	NA	NA	NA
WP_020314652.1\|44239_45514_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.3e-148	60.7
WP_020314636.1\|45525_45939_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-31	52.0
WP_020314635.1\|45971_46217_-	DinI-like family protein	Q7Y3V9	Yersinia_phage	1.1e-08	39.3
WP_020314631.1\|46420_46651_+	hypothetical protein	NA	NA	NA	NA
WP_088903438.1\|47085_47709_+	DNA methylase	A0A2K9VH43	Faecalibacterium_phage	4.0e-21	34.8
WP_023307208.1\|47705_50603_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	5.5e-182	37.8
WP_000509966.1\|50697_51303_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_004194048.1\|51962_53144_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.9e-120	64.2
53513:53528	attL	NA	NA	NA	NA
WP_000091613.1\|53570_53885_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|54139_54496_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|54485_54887_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|54883_55174_-	nucleotidyltransferase	NA	NA	NA	NA
WP_003100881.1\|55248_58215_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
WP_000427623.1\|58293_59298_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_004197809.1\|59479_59683_-	hypothetical protein	NA	NA	NA	NA
WP_004197808.1\|59696_59900_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004197807.1\|59933_60302_-	hypothetical protein	NA	NA	NA	NA
WP_020805591.1\|60345_60840_-	hypothetical protein	NA	NA	NA	NA
WP_020805590.1\|60870_61443_-	hypothetical protein	NA	NA	NA	NA
WP_000272716.1\|61439_61688_-	hypothetical protein	NA	NA	NA	NA
WP_020315560.1\|62124_62814_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_004193995.1\|62844_63534_-	hypothetical protein	NA	NA	NA	NA
WP_088903437.1\|64015_64381_+	hypothetical protein	NA	NA	NA	NA
WP_080884178.1\|64502_64838_+	hypothetical protein	NA	NA	NA	NA
WP_080884177.1\|64834_65629_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.0e-50	88.4
67616:67631	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP022348

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022348_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022348_1

2377268-2378516

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

20 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP022348_1

>merge|NZ_CP022348|1|2377268-2378516|CRT,PILER-CR,CRISPRCasFinder
GATAATAAGGATGGCGGCGCGGGGAACACGTGTATTGAACTGTTGCCACGTTTCCTCCGGGCGGTTTATCCCCGCTGGCGCGGGGAACACCATTCAGACATCAACCAAGCGTTTCGTGAGTCCGGTTTATCCCCGCTAGCGCGGGGAACACGATGATTGCGCTCGGATCACTTGTTACCATTGCGGTTTATCCCCGCTGACGCGGGGAACACGCAGCCTGAACAGCAAGGGTGCGCTCTGAAGACGGCTTATCCCCGCTGGCGCGGGGAACACGTTTTTGGGGGTGAAAAAAGAAATAGAGTGTGCGGTTTATCCCCGCTGGCGCGGGGAACACGGCTGGATGCCGACATCGTGACATATAGCGGGCGGTTTATCCCCGCTGGCGCGGGGAACACGCGCCTTCTCCAGCGCCTCTACCAGCTCAGCACGGTTTATCCCCGCTGGCGCGGGGAACACCTCTCGTATGCTGACTCGTTGGCCTGGGTGGCCGGTTTATCCCCGCTGGCGCGGGGAACACGTATCGGCTAACTTAAGCACTGTGTCTATTCCCGGTTTATCCCCGCTGGCGCGGGGAACACAAGTAGTCCGAAGAGGAGAACTGGCCATCCACCGGTTTATCCCCGCTGGCGCGGGGAACACCGTTTTGATCAGGCCGCCGAATTCGACGGACGCGGTTTATCCCCGCTGGCGCGGGGAACACGACCTTGTCGCCCATCGCTTCGCCGAGGTCGGCGGTTTATCCCCGCTGGCGCGGGGAACACCAGGCCGGTCGCCAGCCGACACTGTGGGTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGTTTGCGTAAGGCTGCCACCTTGTCGCAATGCGGTTTATCCCCGCTGGCGCGGGGAACACCTGAGAGGTTGACTTATAGATGACCTCGGTTCCGGTTTATCCCCGCTGGCGCGGGGAACACCATATAAGCAGCAAGCCAGTCTCTAACTTTACCGGTTTATCCCCGCTGGCGCGGGGAACACATATCGGCCATTTGGTCGCCTGATACACCAGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGAGCGCCTGAGCATGAGCCAAACGTATAATCCGGTTTATCCCCGCTGGCGCGGGGAACACGAGATAGTTATTTACATCAACGTTAATATAACCGGTTTATCCCCGCTGGCGCGGGGAACACAACTGTGTGCCTGGCTCTTCCGTTCCGCGTTGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP022348|1|1|2377268-2378516|CRT
GATAATAAGGATGGCGGCGCGGGGAACAC	GTGTATTGAACTGTTGCCACGTTTCCTCCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTCAGACATCAACCAAGCGTTTCGTGAGTC
CGGTTTATCCCCGCTAGCGCGGGGAACAC	GATGATTGCGCTCGGATCACTTGTTACCATTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCAGCCTGAACAGCAAGGGTGCGCTCTGAAGA
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GTTTTTGGGGGTGAAAAAAGAAATAGAGTGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTGGATGCCGACATCGTGACATATAGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCCTTCTCCAGCGCCTCTACCAGCTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTCGTATGCTGACTCGTTGGCCTGGGTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCGGCTAACTTAAGCACTGTGTCTATTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAGTAGTCCGAAGAGGAGAACTGGCCATCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTTTGATCAGGCCGCCGAATTCGACGGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCTTGTCGCCCATCGCTTCGCCGAGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGGCCGGTCGCCAGCCGACACTGTGGGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTTGCGTAAGGCTGCCACCTTGTCGCAATG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAGAGGTTGACTTATAGATGACCTCGGTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATATAAGCAGCAAGCCAGTCTCTAACTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATCGGCCATTTGGTCGCCTGATACACCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAGCGCCTGAGCATGAGCCAAACGTATAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGATAGTTATTTACATCAACGTTAATATAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTGTGTGCCTGGCTCTTCCGTTCCGCGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP022348|1|1|2377329-2378516|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTCAGACATCAACCAAGCGTTTCGTGAGTC
CGGTTTATCCCCGCTAGCGCGGGGAACAC	GATGATTGCGCTCGGATCACTTGTTACCATTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCAGCCTGAACAGCAAGGGTGCGCTCTGAAGA
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GTTTTTGGGGGTGAAAAAAGAAATAGAGTGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTGGATGCCGACATCGTGACATATAGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCCTTCTCCAGCGCCTCTACCAGCTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTCGTATGCTGACTCGTTGGCCTGGGTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCGGCTAACTTAAGCACTGTGTCTATTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAGTAGTCCGAAGAGGAGAACTGGCCATCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTTTGATCAGGCCGCCGAATTCGACGGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCTTGTCGCCCATCGCTTCGCCGAGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGGCCGGTCGCCAGCCGACACTGTGGGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTTGCGTAAGGCTGCCACCTTGTCGCAATG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAGAGGTTGACTTATAGATGACCTCGGTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATATAAGCAGCAAGCCAGTCTCTAACTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATCGGCCATTTGGTCGCCTGATACACCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAGCGCCTGAGCATGAGCCAAACGTATAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGATAGTTATTTACATCAACGTTAATATAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTGTGTGCCTGGCTCTTCCGTTCCGCGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP022348|1|1|2377329-2378516|CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTCAGACATCAACCAAGCGTTTCGTGAGTC
CGGTTTATCCCCGCTAGCGCGGGGAACAC	GATGATTGCGCTCGGATCACTTGTTACCATTG
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCAGCCTGAACAGCAAGGGTGCGCTCTGAAGA
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GTTTTTGGGGGTGAAAAAAGAAATAGAGTGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCTGGATGCCGACATCGTGACATATAGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCCTTCTCCAGCGCCTCTACCAGCTCAGCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCTCGTATGCTGACTCGTTGGCCTGGGTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTATCGGCTAACTTAAGCACTGTGTCTATTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAGTAGTCCGAAGAGGAGAACTGGCCATCCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTTTTGATCAGGCCGCCGAATTCGACGGACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACCTTGTCGCCCATCGCTTCGCCGAGGTCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CAGGCCGGTCGCCAGCCGACACTGTGGGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTTGCGTAAGGCTGCCACCTTGTCGCAATG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGAGAGGTTGACTTATAGATGACCTCGGTTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CATATAAGCAGCAAGCCAGTCTCTAACTTTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATCGGCCATTTGGTCGCCTGATACACCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAGCGCCTGAGCATGAGCCAAACGTATAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAGATAGTTATTTACATCAACGTTAATATAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACTGTGTGCCTGGCTCTTCCGTTCCGCGTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022348.1\|WP_004853621.1\|2371304_2371910_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP022348.1\|WP_042934158.1\|2378903_2379824_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP022348.1\|WP_004853617.1\|2369736_2370447_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP022348.1\|WP_014839367.1\|2375918_2376974_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP022348.1\|WP_004853615.1\|2369257_2369737_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP022348.1\|WP_014226593.1\|2388086_2389799_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP022348.1\|WP_004104977.1\|2370466_2370784_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP022348.1\|WP_014839372.1\|2378610_2378904_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP022348.1\|WP_014226586.1\|2368211_2369261_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP022348.1\|WP_014839377.1\|2382278_2382833_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	pfam09485_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP022348.1\|WP_014839376.1\|2381208_2382267_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP022348.1\|WP_014839374.1\|2379826_2380471_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP022348.1\|WP_014226587.1\|2371909_2373337_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP022348.1\|WP_014839375.1\|2380452_2381199_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP022348.1\|WP_042934159.1\|2382829_2384386_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP022348.1\|WP_014226592.1\|2387253_2387988_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP022348.1\|WP_042934157.1\|2374264_2375680_-\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|182606
NZ_CP022348.1\|WP_014839379.1\|2384397_2387058_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP022348.1\|WP_004104981.1\|2373346_2374255_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP022348.1\|WP_014839365.1\|2370924_2371251_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
NZ_CP022348.1\|WP_004853621.1\|2371304_2371910_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	2.10171e-149
NZ_CP022348.1\|WP_042934158.1\|2378903_2379824_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.8931e-156
NZ_CP022348.1\|WP_004853617.1\|2369736_2370447_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	9.27277e-117
NZ_CP022348.1\|WP_014839367.1\|2375918_2376974_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP022348.1\|WP_004853615.1\|2369257_2369737_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.33497e-103
NZ_CP022348.1\|WP_014226593.1\|2388086_2389799_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP022348.1\|WP_004104977.1\|2370466_2370784_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	2.04367e-62
NZ_CP022348.1\|WP_014839372.1\|2378610_2378904_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.90677e-62
NZ_CP022348.1\|WP_014226586.1\|2368211_2369261_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	1.489e-176
NZ_CP022348.1\|WP_014839377.1\|2382278_2382833_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.66409e-27
NZ_CP022348.1\|WP_014839376.1\|2381208_2382267_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.04239e-138
NZ_CP022348.1\|WP_014839374.1\|2379826_2380471_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	8.43412e-72
NZ_CP022348.1\|WP_014226587.1\|2371909_2373337_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP022348.1\|WP_014839375.1\|2380452_2381199_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.06761e-50
NZ_CP022348.1\|WP_042934159.1\|2382829_2384386_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.85553e-173
NZ_CP022348.1\|WP_014226592.1\|2387253_2387988_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.70441e-138
NZ_CP022348.1\|WP_042934157.1\|2374264_2375680_-\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|182606	PRK10637, cysG, siroheme synthase CysG.	0
NZ_CP022348.1\|WP_014839379.1\|2384397_2387058_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.46101e-144
NZ_CP022348.1\|WP_004104981.1\|2373346_2374255_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP022348.1\|WP_014839365.1\|2370924_2371251_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	2.07154e-48

>NZ_CP022348.1|WP_014839367.1|2375918_2376974_+|aminopeptidase
MFSALCRRLLPLALGAGFVFSAAPAFSAPGETANAQARHIATFYPGRMTGTPAEMLSADYLRQQFARMGYQSDVRSFNTRYVYTDSNQRKNWHNATGSTVIAAHEGQSRQQIIIMAHLDTYAPQSDKDVENNLGGLTLQGIDDNAMGLGVMLELAEQLKNVPTRYGIRFVATSGEEEGRLGAQNLLKRMSDAEKKNTLLVINLDNLVVGDKLYFNSGRSTPASVRKLTRDRALAIARSHGIAAFTNPGMNRDFPKGTGCCNDASVFDSAGIPVLSVEATNWSLGKKDGYQQRSKSRSFPQGTSWHDVQLDNLQYIDKALPGRIEHRGRDVMKVMLPLVKELAKAEKIPASK
>NZ_CP022348.1|WP_042934157.1|2374264_2375680_-|uroporphyrinogen-III-C-methyltransferase
MEYLPIFAEVKDRPVLVIGGGEIAARKITFLLRAEAKVQIVAEMLMPELAEKVEREEIQWRATVFEEQQLDDVFLVIAATEDDELNQRVYVAANARYRLVNVVDNQALCSFVFPSIVDRSPLLVAISSSGKAPVLSRILREKIEALLPTNLGRLAETASYWRHHIKTHLKTTAERRRFWERVFTGRFASLMLAGNKDEAEKALEDELRQPEKRPGEIILVGAGPGDAGLLTLRGLQALQQADVVFYDNLVTPEVRELVRRDAETICVGKSAAGVSVPQQEINRLLLEAAKAGKTVIRLKGGDPFIFGRGGEELQAAAEEGIPFQVVPGVTAAAGATAYAGIPLTHRDYAQSVTFITGHFGAENSPLDWARLAQSGQTLAIYMGSLKAAEISAQLIANGRGGDTPVAVISRGTRADQQTKTGTLQQLENLAKDAPMPALLVVGEVVQLHQQLAWFQHTSSSDAFKASVVNLA
>NZ_CP022348.1|WP_004104981.1|2373346_2374255_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLAAERPVLERDGMLMMIDDDRINLQPGEMIKKQMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP022348.1|WP_014226587.1|2371909_2373337_-|sulfate-adenylyltransferase-subunit-CysN
MNTTIAQQIANEGGVEAYLHAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAVNKMDLVDFSEETFNTIREAYLTFAEQLPGDLDIRFVPLSALEGDNVASQSDKMPWYSGPTLLEVLETVEIQRVVESQPLRFPVQYVNRPNLDFRGFSGTVAAGSVSVGQRLKVLPSGVESTVARIVTFDGDLPEAAAGEAITLVLKDEIDISRGDLLVDATVSLPAVQSASVDVVWMAEQALTPGQSYDIKIAGKKTRARVDGVRYQVDINNLTQREVESLPLNGIGLVDLTFDEPLVLDKYQDNPVTGGLIFIDRLTNVTVGAGMVREPNEQAQAGASQYSAFELELNQLIRKHFPHWDARDLLGGK
>NZ_CP022348.1|WP_004853621.1|2371304_2371910_-|adenylyl-sulfate-kinase
MARHDENVVWHAHPVTQAQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHRLGVSTYLLDGDNVRHGLCSDLGFSDDDRKENIRRVGEVAKLMVDAGLVVLTAFISPHRAERQMVRERLGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYESPERAEIHLDGEQLVTNLVHQLLDLLRQSDIIRS
>NZ_CP022348.1|WP_014839365.1|2370924_2371251_-|DUF3561-family-protein
MRNTQNISIIRSEPPPAVSDETTWSLSGAAVGFISWLLALGIPFLIYGSNTLFVFLYTWPFFLALMPVAVVVGIALHSLMDGKLQYSVCATILTVGLMFGLLFLWLLG
>NZ_CP022348.1|WP_004104977.1|2370466_2370784_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGLHDYSRVNDDVSAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTRPGETFYRLVPDASKRNQAAGQQQNNR
>NZ_CP022348.1|WP_004853617.1|2369736_2370447_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATFPGVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHAVAALLANPLIQRVVIAVSPGDVRFSQLPLANHSQITVVDGGTERADSVLAGLKVLGEADWVLVHDAARPCLHQDDLSRLLQLCQTSRTGGILAAPVRDTMKRAEPGRAAIAHTVERNDLWHALTPQFFPRELLVDCLTRALNEGATITDEASALEYCGFHPELVAGRADNIKVTRPEDLALAEFYLTRSRHQEKA
>NZ_CP022348.1|WP_004853615.1|2369257_2369737_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRVPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRIFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLRKAEK
>NZ_CP022348.1|WP_014226586.1|2368211_2369261_-|tRNA-pseudouridine(13)-synthase-TruD
MIAFDELTYLHGKPLSQGLLKANPEDFVVVEDLGFAPDGEGEHVLVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRKLRLGALKGNQFTLVLREISDRDDVETRLQAIAEHGVPNYFGAQRFGIGGSNLLGALRWAESGAPVRDRNKRSFWLSAARSALFNQQVGIRLKKPEFNQVVDGDALQLAGRGSWFVAASEELTELQARVDNRELMITAALVGSGDWGSQRDALAAEQAAVVEETQLQALLVREKVEAARRAMLLYPQQMSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
>NZ_CP022348.1|WP_014839372.1|2378610_2378904_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVMVVTENVPPRLRGRLAIWLLEIRAGVYVGDISKRVREMIWQQVTQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPIKNQ
>NZ_CP022348.1|WP_042934158.1|2378903_2379824_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFVSLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSAGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFHEPPPARRSIEQLRGIEGARVRQTYSLLAKQYGVKWHGRNYDPKDWEKGDVVNQCISAATSCFYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARAPAEPDREVRLACRDIFRSTKLTGKLIPLIEEVLAAGEIEPPQPAADMLPPAIPEPQRLGDGGHRGGG
>NZ_CP022348.1|WP_014839374.1|2379826_2380471_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLAKITLYTSQLLPSQLLQLVDRGEYVMHQWLWELFPGGQERQFLYRREEMQGAFRFFVLSTQPPVESNIFDIEYRLFAPALSSGQILRFNLRANPTICKAGKRHDLLMEAKRQVRGQVNGPDIWQYQQRAAQDWLVRQGEQNGFSLCEVNVDAYRQQQVVRAKSRQMIQFSSVDYSGVLVVNEPGLFLQRLAQGYGKSRAFGCGLMLIKPGD
>NZ_CP022348.1|WP_014839375.1|2380452_2381199_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAALGIRRDEEERLNAFNQHYSFLLCASQEPCWARDYHTVQMPKEVRKARYFSRREELSDPELLSALISRRDYYTDAWWMVALAQTPDAPCSLEQLRDALQHPVFPLYLGRKSHPLALPLAPLLLEGSAPDVLNEAYHQYREKFNKVNIRLAELQPECWWEGEHDGLNANKVLRRRDRPMSRQQWTFGERTVNQGSLFNKEEPCTSQK
>NZ_CP022348.1|WP_014839376.1|2381208_2382267_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGSPKTVVLGGATRLRVSSQSLKRSWRTSELFEQALAGNIGIRSGRIAREAANILIEKGIEPKKAVEWVESIANCFGKVKADKKAKDVLTNAETEQLVHISPVEFEAVKALAHRLAEEKRAPKEEELALLRRDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRKTSLEDAGAGHLGEAGFGSALFYTYICIDRDLLVKNLNGDEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGIDQPRSLAAAFYNPINGTNQLDVAVKRITELRENMNKVYGQQTKSIGFDVMQQQGSMKDVLDFICA
>NZ_CP022348.1|WP_014839377.1|2382278_2382833_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKDDHRATLRRWHQDLQEKRGLRASLRRSKTVNEACLSEGFRSLLMQTHSLWKIDGQEWRFTALALTAALAAHVKSIDERQKFAAQLGQMTGNNPVMSERRFSRLSAVKTSDELLRQLLRAVQLLNGVVNLTSLAEDVFIWCRENDELLSHIRRRQRPTEFIRIRWALEYYQAGEANNDDQ
>NZ_CP022348.1|WP_042934159.1|2382829_2384386_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVHLKDGSTGKLAPVNLADESVVDIAAARADLQGAAWQFLLGVLQCSMAPKNHSRWEDVWFEGLSADALQRALEPLKPAFQFGADTPSFMQDFEQLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNRQTPLWRKLWLNVMPQDSAGMPVPERYDETIFPWLAPTRTSEQASAVTTPEQVNPLQAYWGMPRRIRLDFNATHSGRCDLCESESHELLSGMTVKNYGVNYAGWIHPLTPYRLPLKEGSERYSVKPQPGGLIWRDWLGLNQQGASENNTEYPALVVTTSSARSLKDVKVGLWGFGYDFENMKARCWYEHHLPLILTENIIPELRQAAQTASRNLSLLRSALKEAWFADAKGARGDFSFIDIDFWHLTQGCFLELMRDLENGQNADERLNRWQTNIWLFTRSYFDDHVFTNPYEGIDLKRIMLARKKYFTKSAEKQSAKTARAKKQEAAE
>NZ_CP022348.1|WP_014839379.1|2384397_2387058_-|CRISPR-associated-helicase/endonuclease-Cas3
MFNYWGKSRRGEDDGGDDYHLLCWHSLDVAAVGYWMVQHNIYGINDYLNKLGLHHRVQAAQFFAWLLCWHDIGKFAHSFQQLYRHEELNAQDEYIKYYEAIPHATLGYWLWKDYLSECAELFPESPLSARKLKRVIALWMPLTTGHHGRPPSSVTELKNFRQQDKEAARDFLTRVKSLFPLIEIPDFWDDDNGIALFKHLSWFISAAIVLADWVGSSTQYFPRITKSMEVDEYWQQHALVKAKVAVTVFPPSPDVASFSGITALFPFIQQPTPLQQKALELDIDKQGPQLFILEDVTGAGKTEAALILTHRLMATGKAQGLYFGLPTMATANAMFDRMSESWLALYQPGSRPSLVLAHSARGLMDRFNQSLWSGDLSGSEEPDELQPSSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRMLGLNNKILLADEIHAYDAYMSRILESLIEKQASDGNTTILLSATLSQQQRDRLVTAFAKGAKSRVEAPLLGYGDYPWLTQVTSTSVVSLHVETRKEVERSVKVGWMHCEQECIERIEQAVSQGKCIAWIRNSVDDAIRIYRQLLARGSIPAENLLLFHSRFAFFDRQRIENQALTQFGKKGSVQRAGKVLIATQVIEQSLDIDLDEMISDLAPVDLLIQRAGRLQRHIRDRKGLLKASGQDERTAPELVICAPEWDDVPREDWFSGAMRNSAYVYPDHGRLWLTQRVLREQGEIRMPQSARLLIESVYGEDVDMPAGFAKTEQLQEGKYYCDRAFAKQNTINFASGYSPECSDFLPENLSTRLAEESISLWLAKIIDGAVKPYAPGDHTWEMSMLRVREGWWKKHKDEFERLEGERLRQWCIEQHQKQDFAVVIVVSEVENSGYSAIEGLIGKMEV
>NZ_CP022348.1|WP_014226592.1|2387253_2387988_-|phosphoadenosine-phosphosulfate-reductase
MSVLDLNALNALPKVDRVLQLAETNSQLEKLSAEARVAWALENLPGEYVLSSSFGIQAAVSLHLVNQVRPDIPVILTDTGYLFPETYQFIDELTDKLNLNLKIYRAKESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALEELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP022348.1|WP_014226593.1|2388086_2389799_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHTEAYEWAKKISEHLLPRTRAYAEIWLDQKKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLKIAKIHKGEFRITANQNLIIASVPEDQKAKIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDKVEALMSKHGVGDEHIVTRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRSGTRIPRMYRENITESEILDSIDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE

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Crispr_ID: NZ_CP022348_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022348_2

3444770-3444860

Orphan

Consensus_repeat	Method
CCGCCTGCGATCGGGTAGCCCGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022348_2

>merge|NZ_CP022348|2|3444770-3444860|CRISPRCasFinder
CCGCCTGCGATCGGGTAGCCCGGATAAGGCGACAGCCGCCATCCGGGGGATTCAATCCGCTTCACAGCCGCCTGCGTTCGGGTAGCCCGGA

>NZ_CP022348|2|2|3444770-3444860|CRISPRCasFinder
CCGCCTGCGATCGGGTAGCCCGGA	TAAGGCGACAGCCGCCATCCGGGGGATTCAATCCGCTTCACAG
CCGCCTGCGTTCGGGTAGCCCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022348.1\|WP_086073986.1\|3455936_3456818_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP022348.1\|WP_014839821.1\|3441553_3442468_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176160
NZ_CP022348.1\|WP_014227282.1\|3435816_3436770_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NZ_CP022348.1\|WP_014839817.1\|3438279_3439140_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP022348.1\|WP_014839830.1\|3455456_3455765_+\|CcdB-family-protein	unknown	unknown	gnl\|CDD\|376629
NZ_CP022348.1\|WP_014839828.1\|3451424_3452591_+\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP022348.1\|WP_014227287.1\|3440229_3440700_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP022348.1\|WP_014227284.1\|3437733_3438288_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP022348.1\|WP_014839818.1\|3439164_3439974_-\|lipoprotein-NlpA	unknown	unknown	gnl\|CDD\|182119
NZ_CP022348.1\|WP_014839829.1\|3453678_3455112_+\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|181971
NZ_CP022348.1\|WP_014839816.1\|3436784_3437564_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NZ_CP022348.1\|WP_014839825.1\|3445774_3446899_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_CP022348.1\|WP_014839820.1\|3440830_3441451_-\|phosphatase	unknown	unknown	gnl\|CDD\|226105
NZ_CP022348.1\|WP_009654080.1\|3452751_3453654_+\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP022348.1\|WP_014839826.1\|3446898_3450006_+\|multidrug-efflux-RND-transporter-permease-subunit-EefB	unknown	unknown	gnl\|CDD\|273335
NZ_CP022348.1\|WP_089046399.1\|3442464_3443961_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP022348.1\|WP_014227292.1\|3444904_3445321_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022348.1\|WP_014839827.1\|3450009_3451374_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|182103
NZ_CP022348.1\|WP_014227291.1\|3444041_3444689_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP022348.1\|WP_014227298.1\|3455217_3455454_+\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	unknown	unknown	gnl\|CDD\|377822

Protein	Function_ID	Function_description	E-value
NZ_CP022348.1\|WP_086073986.1\|3455936_3456818_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.33721e-50
NZ_CP022348.1\|WP_014839821.1\|3441553_3442468_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176160	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 2. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.13718e-90
NZ_CP022348.1\|WP_014227282.1\|3435816_3436770_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	2.3633e-104
NZ_CP022348.1\|WP_014839817.1\|3438279_3439140_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.86137e-13
NZ_CP022348.1\|WP_014839830.1\|3455456_3455765_+\|CcdB-family-protein	gnl\|CDD\|376629	pfam01845, CcdB, CcdB protein.	7.29287e-43
NZ_CP022348.1\|WP_014839828.1\|3451424_3452591_+\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.22831e-84
NZ_CP022348.1\|WP_014227287.1\|3440229_3440700_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	5.44062e-96
NZ_CP022348.1\|WP_014227284.1\|3437733_3438288_+\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	2.48486e-36
NZ_CP022348.1\|WP_014839818.1\|3439164_3439974_-\|lipoprotein-NlpA	gnl\|CDD\|182119	PRK09861, PRK09861, lipoprotein NlpA.	0
NZ_CP022348.1\|WP_014839829.1\|3453678_3455112_+\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	gnl\|CDD\|181971	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed.	0
NZ_CP022348.1\|WP_014839816.1\|3436784_3437564_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	2.21338e-20
NZ_CP022348.1\|WP_014839825.1\|3445774_3446899_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	1.17979e-112
NZ_CP022348.1\|WP_014839820.1\|3440830_3441451_-\|phosphatase	gnl\|CDD\|226105	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only].	6.96758e-13
NZ_CP022348.1\|WP_009654080.1\|3452751_3453654_+\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.42234e-175
NZ_CP022348.1\|WP_014839826.1\|3446898_3450006_+\|multidrug-efflux-RND-transporter-permease-subunit-EefB	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP022348.1\|WP_089046399.1\|3442464_3443961_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.27447e-70
NZ_CP022348.1\|WP_014227292.1\|3444904_3445321_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.26999e-11
NZ_CP022348.1\|WP_014839827.1\|3450009_3451374_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|182103	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein.	6.39623e-100
NZ_CP022348.1\|WP_014227291.1\|3444041_3444689_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.23396e-14
NZ_CP022348.1\|WP_014227298.1\|3455217_3455454_+\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	gnl\|CDD\|377822	pfam07362, CcdA, Post-segregation antitoxin CcdA. This family consists of several Enterobacterial post-segregation antitoxin CcdA proteins. The F plasmid-carried bacterial toxin, the CcdB protein, is known to act on DNA gyrase in two different ways. CcdB poisons the gyrase-DNA complex, blocking the passage of polymerases and leading to double-strand breakage of the DNA. Alternatively, in cells that overexpress CcdB, the A subunit of DNA gyrase (GyrA) has been found as an inactive complex with CcdB. Both poisoning and inactivation can be prevented and reversed in the presence of the F plasmid-encoded antidote, the CcdA protein.	8.08152e-21

>NZ_CP022348.1|WP_014227291.1|3444041_3444689_+|TetR/AcrR-family-transcriptional-regulator
MSAQKDNEAPRRPGRPRGQKSGSANREQLMDIALALFARHGIARISLNAIAKEAGVTPAMLHYYFSSREALVEKLVEERFMPLRSEIGQIFVAHGDDPVTAFTLLIETLAAMAEKNAWFAPLWMQEIIGEMPVLRQHMHARFGDEKYHKMLETVRRWQREGKLNPALSPELLFTTLISLVLVPFSRTHTDPRLQSVDRKMIVSHALALTGRGIGG
>NZ_CP022348.1|WP_089046399.1|3442464_3443961_-|MFS-transporter
MTSEIASQPAVPSIRLLFSALLLVMLLSALDQTIVSTALPTIVGELGGLDKLSWVVTAYILSSTIAVPLYGKFGDLFGRKIVLQVAIVLFLAGSALCGLAQNMAQLVLMRGLQGLGGGGLMVISMAAVADVIPPANRGRYQGLFGGVFGLATVIGPLIGGFLVQHASWRWIFYINLPLGLFALLVIGAVFHSSNKRSQHQIDWLGAIYLSMALLCIILFTSEGGSVRAWSDPQLWCILAFGLVGIVGFIHEERLASEPIIPLSLFRNRSFLLCSLIGFVIGMALFGSVTFLPLYLQVVKEATPTEAGLQLIPLMGGLLLTSIVSGRIISRTGKYRVFPIIGTLLGVVGMVLLTRITIHSAMWQLYLFTGVLGAGLGLVMQVLVLAVQNAMPAQMYGVATSGVTLFRSIGGSIGVALFGAVFTHVLQSNLQRLLPEGAQLPRALNPAAVQNLPAEIRLDYLDAFGSAIHAAFLMAACIMAVAFALSWLLKEAPLKTGTR
>NZ_CP022348.1|WP_014839821.1|3441553_3442468_+|LysR-family-transcriptional-regulator
MDRLSAMALLVKVAELGSMSAAARALNMPLTTVSRQIGELENTLGVRLMIRTTRKLTLTDAGVDYVAAVRRILEEVENAERQAAGEYQEPKGELVLSAPTMFGRQHVLPVVTDFLARYPQIRVRLLLSDRNADLVGDHIDLAVRIGTLPDSGMVATRLGEMRIVTCAHPALLEKHGIPERPRELAALPIIRIESPMPYRGWRFNAEEAEDRLVALQPVLSLTTPESAADAARLGAGVARLLHYQAIDGLARGELKLLLQAMEPEPAPVHLLYTSRDLAPLKLRKFIDFAAPALRRALRRIAAAV
>NZ_CP022348.1|WP_014839820.1|3440830_3441451_-|phosphatase
MPAEFLDIAMTPDVMDVQHEMGSDELWQSPHRQRRGERFGASEEAMIATRDSFYLATLSQTGWPYIQHRGGPVGFLHLLDETTLGMADFSGNRQYITTGNLRGSDRACLFLMDYPRRARLKIYATVEVVAVDADPQLLAQVAPENYRARIERIYRFHLQAFDWNCPQHIIPRYTARQVAEYSQTLQQRIDELERENQRLQQLIYPK
>NZ_CP022348.1|WP_014227287.1|3440229_3440700_-|nuclear-transport-factor-2-family-protein
MTEQRPPLPPFTRESAAQKVRAAEDGWNSRDAAKVALAYTVESEWRNRSEFVHGRTQIIDFLQRKWRKEQEYRLIKELWAWSDNRIAVRFAYEWHDDSGNWFRSYGNENWEFDEHGLMQTRYACINDLPITESERLFHWPQGRRPDDHPGLSELGL
>NZ_CP022348.1|WP_014839818.1|3439164_3439974_-|lipoprotein-NlpA
MKLRLRTAAAVVLAGLLLAGCDQKGSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNESTNAGDLDANVFQHRPFLEQDNKAHNYRLVAVGNTFVFPMAGYSRKIKSVAELKDGATIAIPNDPTNLGRALLLLQQEKLITLKAGTGLLPTAVDIIDNPHHLKIMELEGAQLPRVIDDPKVDVAIISTTYLQQTGLSPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKAFIHSYQSPEVAKAAETIFNGGAVPGW
>NZ_CP022348.1|WP_014839817.1|3438279_3439140_-|EamA-family-transporter
MTRQRQADLLLIAATVIAACGWIFSREAIAGMPVFAFLGLRFFFAALLLLPFCRGLRVERQQWPRMIISGLWFALNLCLWIYSVSTTPSLGEGAFIMSLSMLFVPLTAWVMMKARPARAYWECLPIAVVGLGLLSLHMPIAFHPSQGWFLLTALVQSIWFCYTSKSAREVPLIPLTTVQLGITGIVGLGISAAVESWTQPFTLPTFGWLLASIVIATSLRFGLQMKGQKYAAVASAAIIMVLEPLLTVIAAALWYGEQLPLQKIIGGLLILVAQLWFRWRMLKPLR
>NZ_CP022348.1|WP_014227284.1|3437733_3438288_+|NUDIX-hydrolase
MKKKLTSADMHDVEVLADTPWFSMRKVGIDMAPGDRRDFFSIHYPRPAVGIVAMQDDKVLLIRHYRYLIDRVVWAIPSGGVDEGEDPREAALRELREETGWQAQRADEIIRYNPSYGSSDQLFITWLAHDLTWVGMDEDQDEVMETGWFTLEEIGQLIARGEMPDGLSLVPLLHLMAQRRTGLA
>NZ_CP022348.1|WP_014839816.1|3436784_3437564_-|MBL-fold-metallo-hydrolase
MKITHVRNATQLIEYAGKKFLIDPMLSDKGACAGFAGTARSELRNPLVELPFSIETIVDVDAVIVTHTHQDHWDEAAIAAIPKTLPVYVQHDADAQLLRGQGFRDIRLLSEDSAFADVALVKTTSGQHGSDRTYAVPAMAERLGEACGVVLRHPQEKTLWLVGDTIWRDEVEADMLRLRPDVVVLNAGYAHVIGFGPIIMGKEDVLKAHFVLPEAKIVASHMEAVNHCLLSRDELRQYVADNQIAEAVSIPQDGESMVF
>NZ_CP022348.1|WP_014227282.1|3435816_3436770_-|helix-turn-helix-domain-containing-protein
MKLTEVAIVAVDGFSPFHYSVPCMLFGDTVSETKRFNLHICAERPGLLSARDGFALNASGDFSLLAQADIVVVPYWGAVNQRPSQPLLDGLVRARNNGAQIVGLCLGAFVLGYAGLLDDRRAATHWEFEQDFQRQFPQVRLDINALYVDDEGIITSAGTAAALDCCLYLIRQRFGSLVANQIARRMIVPPHREGGQAQFIAQPVPKNTRDARINGLLEYLQQHIREPHNLDSLAQVAAMSRRTLTRHFAKATGMGIADWLAAERLRRSQILLEAGDLPVGQVAEEVGYRSAVTWRQQFKARFGVSPAEWRRTFRRGA
>NZ_CP022348.1|WP_014227292.1|3444904_3445321_-|GNAT-family-N-acetyltransferase
MTLIITENINPADQEELLAGLREYNLRFLDPAQFGELGVYSRDDAGAMRGGLIGKRKGSWLCIEYLWVSEASRGSGLGSELMHEAENQARARGCSHVLVDTFSFQALPFYQKLGYQLQMSLPGFPHVGMQRHYLSKAL
>NZ_CP022348.1|WP_014839825.1|3445774_3446899_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKYTLAPIAAALFLLSGCDNAQNASPQQMTQEVGVVTLHGQPVPVVSSLTGRTTASLSAEVRPQVGGIVQKRLFTEGDMVKAGQALYQIDPSSYRATFNEAAASLKQAQALVIADCQKAQRYAVLVKDNGVSRQDADDAIATCNQDKASVESKKAALESARINLNWTTVTAPIAGRIGISSVTPGALVSADQDTALATIRGLDTIYVDLTRSSVDLLRLRKQSLASNSDTLNVTLTLEDGSTYSEKGRLALTEVAVDESTGSVTLRAVFPNPQHVLLPGMFVRARIDEGIMNDAILAPQQGITRDAKGDATALVVDANNKVEQRSVETGETYGDKWLIVNGLKSGDRLIVEGTGKVAPGQQVKAAEVKNDGGNA
>NZ_CP022348.1|WP_014839826.1|3446898_3450006_+|multidrug-efflux-RND-transporter-permease-subunit-EefB
MFSRFFVRRPVFAWVIAILIMLAGILAIRTLPVAQYPDVAPPAIKISATYTGASAETLENSVTQVIEQQLTGLDNLLYFTSTSSSDGSVSITVTFEQGTDPDTAQVQVQNKVQQAESRLPSEVQQSGVTVEKSQSSFLLILAVYDKNNKATSSDISDWLVSNMQDPMARIEGVGSLQVFGAEYAMRIWMDPTKLASYSLMPSDVQSAIEAQNVQVSAGKIGALPASNAQQLTATVRAQSRLQTVAQFKDIIVKSKSDGSVVRLSDVARVEMGSEDYTASANLNGHPAAGIAVMMAPGANALNTATLVKNKIAEFQRQMPQGYDIAYPKDSTEFIKISVEDVIQTLFEAIILVVCVMYLFLQNFRATLIPAVAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERIMRDEGLPAREATEKSMGEISGALIAIALVLSAVFLPMAFFGGSTGVIYRQFSVTIISAMMLSVVVALTLTPALCGALLSHSKPHTKGFFGAFNRLWGRTEQGYQHRVVGGLRRSAMMMGAFVLICGGMALAMWKLPGSFLPTEDQGEIMIQYTLPAGATAVRTAEVRRQVTDWFLTKEKANTDVIFTVDGFSFSGSGQNAGMAFVSLKNWSERKGEENTAQAIALRATKELGSIRDATLFAMTPPSVDGLGQSNGFTFELMASGGTDRDSLMKMRSQLLAAANQSTELQSVRANDLPQMPQLQVDIDNNKAVSLGLSLSDVTDTLSSAWGGTYVNDFIDRGRVKKVYIQGESDARAVPSDLGKWFVRGSDDSMTPFSAFATTRWQYGPESLVRYNGSAAFEIQGENASGFSSGAAMDKMEALANNLPAGTTWAWSGMSLQEKLASGQAMSLYAISILVVFLCLAALYESWSVPFSVIMVIPLGLLGAALAAWMRGLSNDVYFQVALLTTIGLSSKNAILIVEFAESAVEEGYSLSRAAMRAAQTRLRPIVMTSLAFIAGVLPLAIATGAGANSRVAIGTGIIGGTLTATLLAVFFVPLFFVLVKRFFTRHRSSQE
>NZ_CP022348.1|WP_014839827.1|3450009_3451374_+|efflux-transporter-outer-membrane-subunit
MFRFTLVFVALLTAGCVSLDPHYERPAAPVPATLPGSHGEATAVVSDWQQVVNDARLKKVVNIALTSNRDVQKALADIEAARAQFGETRASLFPTLDAELSHTRSKTVASGLTSSAEADGAVSSFELDLFGKNQSLTRAARETWLASEFTAQNTRLTMIADLTTAWITLAADNSNLALAQDTMASAENSRRIVTRQMEVGTASAGDLSDAESVYQQARASVASYRTLVAQDKNALNLLAGETVPDSLLPGTLESLGDRSITLVPAGVSSSVLLRRPDIQEAEHNLKSANADIGAARANFFPSISLTASAGVGSDSLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYAEAEKKGLIATYEKTIQSAFKDVADALARRETLSEQLDAQNKYVAAEQKSLNIAMKSYQAGVGDYLSVLTAQRTLWSAQATLISLQQTDLENRITLWQSLGGGAS
>NZ_CP022348.1|WP_014839828.1|3451424_3452591_+|multidrug-effflux-MFS-transporter
MSRISLSWVVVLGLLSAIGPLCTDFYLPALPEITQQLSATGTQTQLSLTAALIGLGLGQLFFGPLSDRIGRKKPLALSLLLFIFSSAMCAITYDIHMLIAWRFLQGFAGAGGSVLSRSIARDRYQGTLLTQFFALLMTVNGIAPVLSPVLGGWIITAFDWRILFWAMAAIGVVLLLLSLTVLHETLPAKSTASATRQQADAPVLKNRRFMRYCLIQAFMMAGLFSYIGSSSFVIQSEYAMSAMQFSLLFGLNGIGLIIAALIFSRLARRFSAEALLRGGQLLAVAFAAITLLVAWLPQPTLALVGLFFTVSMMSGISTVAGSEAMNAIHARQSGTASALMGTLMFVFGGIAAPLAGLGGETMLKMSFAMTLCYLAALLIGLKKPRPIA
>NZ_CP022348.1|WP_009654080.1|3452751_3453654_+|N-acetylmuramic-acid-6-phosphate-etherase
MSIDLSKLLTERRNANSANIDILTTEEMLTVINQEDQQVAHAITPYLPQIAQVVDKVAAALQAGGRLIYIGAGTSGRLGILDASECPPTFGTRPEQVVGIIAGGHKAILSAVENVEDNKAQGAMDLQNLNFSSRDVLVGLAASGRTPYVIGAMEYAHSQNAFVAIVSCNPHGEMAQLADVAITPVVGPEVVTGSTRLKAGTAQKLVLNMISTGAMIRIGKVYSNLMVDVEATNAKLIERQVSIVMEATECDRATAQSALEACDRHCKTAIVMVLADLSAADAQALLAKNNGYIRKALSHS
>NZ_CP022348.1|WP_014839829.1|3453678_3455112_+|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC
MAKINKEMIARILQHVGGAGNVAQAGNCMTRLRLTLRDESRADSAAIRQIDGVMGVIVSDEQFQVVLGPGKAQSAAEMMNALLEEAPADAPSLADVAAEKKQALKSKQTSGIQKFLAKFATIFTPLIPGFIAVGLLLGFATLAEQIFVLENAHPNATLMALIGYMKVFSKGMFTFLSILIGYNAQKAFGGSGVNGAIIAALFVLGYNPEATSGFYSGISTFFGHGIDPRGNIIGVLIAAIIGAWVERQVRRIMPANLDMILTSAVTLLIMGAITFTVIMPIGGWLFTGMSWLFLHLNGNPFGSAVLAGLFLLAVMFGVHQGFVPVYFALVDAQGFNSLFPILAMAGAGQVGAALALFWRAKHGSLLRTQIKGAIIPGFLGIGEPLIYGVTLPRMKPFVTACLGGACGGFFLGLIAWLGLPVGLNTVFGPSGLVALPLMTSGSGIYAGMAVYAAGLAVSYLCGFALTWLFGSKNVDLS
>NZ_CP022348.1|WP_014227298.1|3455217_3455454_+|type-II-toxin-antitoxin-system-CcdA-family-antitoxin
MPAAKRNKQNVSVTLDPGLVKQAREVGINLSLTLTNALKSEIHSLEIARWQKENAQAIDYLNNLTEENGLLSDEYRTF
>NZ_CP022348.1|WP_014839830.1|3455456_3455765_+|CcdB-family-protein
MQYYVYKNTGRIAAYPYLLDVQSDIIGKRNTRVVIPLFPLKNYKGPRADRLTPLVTVEGEEYVVMTHELASIPHRVLGKEVCNLNHQREVVKASMDFLFDGI
>NZ_CP022348.1|WP_086073986.1|3455936_3456818_+|EamA-family-transporter
MLNVLIAAVLWGSSGVCAQYIMQQSQMSSPFLTMTRLLFAGLILLMLSFFHGDKIFRVLQNRKDAASLLIFSLFGALTVQYTFLMTIEQSNAATATVLQFLSPTIIVAWFAIARKTRPSPLVLAAIATSLAGTFLLVTHGNPTTLSISPTALFWGIASAFAAAFYTTYPSTLIARYGTLPIVGWSMLLGGAMLLPFYAGQGNHFVVTGGLLLAFFYLVVIGTSLTFSLYLNGAQKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVVLIAMDSRRRVKTA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP022348.1	5057066-5057097	2	0.938

1. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to position: 5057066-5057097, mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcatca	Protospacer
************************** ** **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	KY271395	Klebsiella phage 2b LV-2017, complete genome	25012-25043	0	1.0
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	KY271396	Klebsiella phage 2 LV-2017, complete genome	19535-19566	0	1.0
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	NZ_CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	39944-39975	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	LR134212	Klebsiella aerogenes strain NCTC418 genome assembly, plasmid: 3	7290-7321	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	KY271395	Klebsiella phage 2b LV-2017, complete genome	40078-40109	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	38852-38883	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	KY271396	Klebsiella phage 2 LV-2017, complete genome	4223-4254	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	38852-38883	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	41298-41329	1	0.969
NZ_CP022348_1	1.3\|2377419\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377419-2377450	32	NZ_CP046951	Klebsiella pneumoniae strain BD_DM_914 plasmid punnamed2, complete sequence	97210-97241	1	0.969
NZ_CP022348_1	1.3\|2377419\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377419-2377450	32	NZ_CP046941	Klebsiella pneumoniae strain BD_DM_697 plasmid punnamed2	97204-97235	1	0.969
NZ_CP022348_1	1.3\|2377419\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377419-2377450	32	NZ_CP046383	Klebsiella pneumoniae strain BD_DM_782 plasmid punnamed2, complete sequence	97191-97222	1	0.969
NZ_CP022348_1	1.3\|2377419\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377419-2377450	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	14735-14766	1	0.969
NZ_CP022348_1	1.3\|2377419\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377419-2377450	32	MK416014	Klebsiella phage ST16-OXA48phi5.3, complete genome	13728-13759	1	0.969
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	KY271400	Klebsiella phage 6 LV-2017, complete genome	6975-7006	1	0.969
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	21896-21927	1	0.969
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	21896-21927	1	0.969
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	30615-30646	1	0.969
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	20433-20464	1	0.969
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MT774487	Salmonella phage MG40, complete genome	36189-36220	1	0.969
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MH370387	Salmonella phage S149, complete genome	20284-20315	1	0.969
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MG407615	Salmonella phage Bp96115, partial genome	10203-10234	1	0.969
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	NC_005841	Enterobacteria phage ST104 DNA, complete genome	20285-20316	1	0.969
NZ_CP022348_1	1.1\|2377297\|32\|NZ_CP022348\|CRT	2377297-2377328	32	MK714353	Klebsiella phage ST13-OXA48phi12.5, complete genome	37456-37487	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	HG918041	Klebsiella pneumoniae Kp15 plasmid pENVA complete sequence	118140-118171	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN543575	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence	303342-303373	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN543576	Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence	13686-13717	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	176732-176763	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	136266-136297	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	146288-146319	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP032356	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence	13686-13717	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK416010	Klebsiella phage ST11-OXA245phi3.2, complete genome	32751-32782	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MG432137	Pectobacterium phage PEAT2, complete genome	19275-19306	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK416022	Klebsiella phage ST846-OXA48phi9.2, complete genome	17388-17419	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	KY271399	Klebsiella phage 5 LV-2017, complete genome	13913-13944	2	0.938
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	24228-24259	2	0.938
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	25513-25544	2	0.938
NZ_CP022348_1	1.13\|2378029\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378029-2378060	32	MK714353	Klebsiella phage ST13-OXA48phi12.5, complete genome	30108-30139	2	0.938
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	4363-4394	3	0.906
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	11648-11679	4	0.875
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	24018-24049	4	0.875
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK714353	Klebsiella phage ST13-OXA48phi12.5, complete genome	11391-11422	4	0.875
NZ_CP022348_1	1.3\|2377419\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377419-2377450	32	JQ182729	Enterobacterial phage mEp390, complete genome	34842-34873	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK416013	Klebsiella phage ST16-OXA48phi5.1, complete genome	27065-27096	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN098327	Klebsiella phage Mulock, complete genome	36771-36802	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MT682064	Klebsiella virus KpV2811, complete genome	44817-44848	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN855851	Bacteriophage sp. isolate 246, complete genome	1147-1178	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	10398-10429	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN013086	Klebsiella phage vB_Kpn_Chronis, complete genome	36841-36872	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP044178	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1	30566-30597	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	15644-15675	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN582098	Podoviridae sp. ctKoA10, complete genome	4602-4633	5	0.844
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MN602881	Erwinia phage Midgardsormr38, complete genome	46211-46242	5	0.844
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	14845-14876	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	33614-33645	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MT251347	Klebsiella phage LASTA, complete genome	49264-49295	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MT251348	Klebsiella phage SJM3, complete genome	49264-49295	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	274814-274845	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	KY271395	Klebsiella phage 2b LV-2017, complete genome	14057-14088	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	160989-161020	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	13693-13724	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP024497	Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence	13693-13724	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP024501	Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence	13693-13724	6	0.812
NZ_CP022348_1	1.11\|2377907\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377907-2377938	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	369329-369360	6	0.812
NZ_CP022348_1	1.13\|2378029\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378029-2378060	32	MK327140	Klebsiella phage YX3973, complete genome	727-758	6	0.812
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP014649	Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence	53164-53195	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_021654	Klebsiella pneumoniae plasmid pKN-LS6, complete sequence	188207-188238	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP007729	Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence	152781-152812	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP037929	Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence	257112-257143	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN922301	Klebsiella pneumoniae strain KP-14159 plasmid pKPN-IT-14159, complete sequence	257112-257143	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK422448	Klebsiella phage ST512-KPC3phi13.3, complete genome	28554-28585	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MK422450	Klebsiella phage ST13-OXA48phi12.4, complete genome	33302-33333	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_009425	Enterobacter sp. 638 plasmid pENTE01, complete sequence	58741-58772	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MH399779	Microbacterium phage Jacko, complete genome	42217-42248	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	FN582354	Enterobacteria phage phi80 partial sequence 5' end	7362-7393	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_021190	Enterobacteria phage phi80, complete genome	7336-7367	7	0.781
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	701645-701676	7	0.781
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1780501-1780532	7	0.781
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MG983840	Escherichia phage myPSH1131, complete genome	69473-69504	7	0.781
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MG976803	Escherichia phage myPSH2311, complete genome	61383-61414	7	0.781
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	MN508615	UNVERIFIED: Escherichia phage ES17, complete genome	4800-4831	7	0.781
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP015755	Klebsiella pneumoniae strain W14 plasmid unnamed2, complete sequence	19820-19851	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP016161	Klebsiella pneumoniae strain TH1 isolate TH1 plasmid unnamed2, complete sequence	32510-32541	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_MF144193	Klebsiella pneumoniae strain 205880 plasmid p205880-NR1, complete sequence	83774-83805	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_019789	Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE01, complete sequence	424408-424439	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_012527	Deinococcus deserti VCD115 plasmid 1, complete sequence	264810-264841	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP014767	Pontibacter akesuensis strain AKS 1T plasmid Paks1, complete sequence	11567-11598	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694325	Marine virus AFVG_250M692, complete genome	7620-7651	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694099	Marine virus AFVG_250M963, complete genome	29796-29827	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	KX987127	Thermus phage G20c, complete genome	51535-51566	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694602	Marine virus AFVG_250M1128, complete genome	7622-7653	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694553	Marine virus AFVG_250M961, complete genome	7668-7699	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694728	Marine virus AFVG_250M962, complete genome	7678-7709	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694378	Marine virus AFVG_250M964, complete genome	29854-29885	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694090	Marine virus AFVG_250M1127, complete genome	7617-7648	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	EU100883	Thermus phage P23-45, complete genome	52938-52969	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_009804	Thermus phage P74-26, complete genome	52121-52152	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	MN694691	Marine virus AFVG_250M693, complete genome	7622-7653	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	324241-324272	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	376111-376142	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	466941-466972	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_LR134447	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence	19824-19855	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1081248-1081279	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2446886-2446917	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP010760	Phaeobacter inhibens strain P80 plasmid pP80_d, complete sequence	72246-72277	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP010603	Phaeobacter inhibens strain P83 plasmid pP83_d, complete sequence	72252-72283	8	0.75
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP010709	Phaeobacter inhibens strain P66 plasmid pP66_d, complete sequence	72247-72278	8	0.75
NZ_CP022348_1	1.13\|2378029\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378029-2378060	32	MN855929	Bacteriophage sp. isolate 476, complete genome	2043-2074	8	0.75
NZ_CP022348_1	1.16\|2378212\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378212-2378243	32	LT614807	Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I	126759-126790	8	0.75
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	903204-903235	8	0.75
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	890674-890705	8	0.75
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	14570-14601	8	0.75
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1054462-1054493	8	0.75
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	969641-969672	8	0.75
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	744533-744564	8	0.75
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP033380	Escherichia coli strain L73 plasmid pL73-3, complete sequence	2814-2845	9	0.719
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_CP033801	Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4	5879-5910	9	0.719
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	KM107845	Escherichia coli strain G5 plasmid pSYM9, complete sequence	5568-5599	9	0.719
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NC_009427	Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence	295571-295602	9	0.719
NZ_CP022348_1	1.11\|2377907\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377907-2377938	32	NZ_CP026221	Aeromonas sp. ASNIH4 plasmid pAER-f909, complete sequence	75909-75940	9	0.719
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5757656-5757687	9	0.719
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	MH113815	Pseudomonas phage Alpheus, complete genome	23617-23648	9	0.719
NZ_CP022348_1	1.18\|2378334\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378334-2378365	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	439728-439759	9	0.719
NZ_CP022348_1	1.19\|2378395\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378395-2378426	32	LR214956	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 2	4008-4039	9	0.719
NZ_CP022348_1	1.19\|2378395\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378395-2378426	32	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	106904-106935	9	0.719
NZ_CP022348_1	1.19\|2378395\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378395-2378426	32	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	96496-96527	9	0.719
NZ_CP022348_1	1.19\|2378395\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378395-2378426	32	LR214959	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 5	11245-11276	9	0.719
NZ_CP022348_1	1.19\|2378395\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378395-2378426	32	LR214960	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 6	4974-5005	9	0.719
NZ_CP022348_1	1.19\|2378395\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378395-2378426	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	53183-53214	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	908629-908660	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	829383-829414	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	797832-797863	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	893767-893798	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	895604-895635	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	490238-490269	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	399752-399783	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1560793-1560824	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1246899-1246930	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1154457-1154488	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1515864-1515895	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	516385-516416	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	816277-816308	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	31978-32009	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	115747-115778	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	914837-914868	9	0.719
NZ_CP022348_1	1.20\|2378456\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378456-2378487	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	829387-829418	9	0.719
NZ_CP022348_1	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	562287-562318	10	0.688
NZ_CP022348_1	1.12\|2377968\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377968-2377999	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	2161621-2161652	10	0.688
NZ_CP022348_1	1.16\|2378212\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378212-2378243	32	MN013084	Klebsiella phage vB_KaeM_KaAlpha, complete genome	129266-129297	10	0.688
NZ_CP022348_1	1.16\|2378212\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378212-2378243	32	MN693619	Marine virus AFVG_250M78, complete genome	17367-17398	10	0.688
NZ_CP022348_1	1.16\|2378212\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378212-2378243	32	MN694388	Marine virus AFVG_250M79, complete genome	17360-17391	10	0.688
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	NC_016138	Pseudomonas aeruginosa plasmid pUM505, complete sequence	7090-7121	11	0.656
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	NZ_CP030914	Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence	18932-18963	11	0.656
NZ_CP022348_1	1.14\|2378090\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378090-2378121	32	NC_019202	Pseudomonas aeruginosa plasmid pKLC102, complete sequence	8455-8486	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	MF574151	Vibrio phage JSF25, complete genome	4420-4451	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883643	Vibrio phage JSF28, complete genome	5572-5603	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	HQ641344	Vibrio phage ICP3_2007_A, complete genome	38551-38582	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883646	Vibrio phage JSF32, complete genome	26067-26098	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883651	Vibrio phage JSF20, complete genome	642-673	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	NC_015159	Vibrio phage ICP3, complete genome	38625-38656	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883644	Vibrio phage JSF30, complete genome	4199-4230	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	NC_013651	Vibrio phage N4, complete genome	37970-38001	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	JQ780163	Vibrio phage VP3, complete genome	38956-38987	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	HQ641342	Vibrio phage ICP3_2009_A, partial genome	38496-38527	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883641	Vibrio phage JSF11, complete genome	12917-12948	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	NC_007149	Vibriophage VP4, complete genome	38979-39010	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883653	Vibrio phage JSF34, complete genome	642-673	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	FJ409640	Vibriophage N4, complete genome	37970-38001	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	HQ641341	Vibrio phage ICP3_2009_B, complete genome	38505-38536	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	MG957431	Vibrio phage Rostov-1, complete genome	33859-33890	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883650	Vibrio phage JSF18, complete genome	463-494	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883645	Vibrio phage JSF31, complete genome	8217-8248	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	HQ641343	Vibrio phage ICP3_2008_A, complete genome	38780-38811	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883649	Vibrio phage JSF36, complete genome	12298-12329	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883652	Vibrio phage JSF24, complete genome	642-673	11	0.656
NZ_CP022348_1	1.15\|2378151\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2378151-2378182	32	KY883648	Vibrio phage JSF35, complete genome	37912-37943	11	0.656

1. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271395 (Klebsiella phage 2b LV-2017, complete genome) position: , mismatch: 0, identity: 1.0

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gaccttgtcgcccatcgcttcgccgaggtcgg	Protospacer
********************************

2. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271396 (Klebsiella phage 2 LV-2017, complete genome) position: , mismatch: 0, identity: 1.0

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gaccttgtcgcccatcgcttcgccgaggtcgg	Protospacer
********************************

3. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

4. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to LR134212 (Klebsiella aerogenes strain NCTC418 genome assembly, plasmid: 3) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

5. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to KY271395 (Klebsiella phage 2b LV-2017, complete genome) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

6. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

7. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to KY271396 (Klebsiella phage 2 LV-2017, complete genome) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

8. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

9. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 1, identity: 0.969

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaactgttgccacgtttcctccggg	Protospacer
* ******************************

10. spacer 1.3|2377419|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046951 (Klebsiella pneumoniae strain BD_DM_914 plasmid punnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

gatgattgcgctcggatcacttgttaccattg	CRISPR spacer
gacgattgcgctcggatcacttgttaccattg	Protospacer
**.*****************************

11. spacer 1.3|2377419|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046941 (Klebsiella pneumoniae strain BD_DM_697 plasmid punnamed2) position: , mismatch: 1, identity: 0.969

gatgattgcgctcggatcacttgttaccattg	CRISPR spacer
gacgattgcgctcggatcacttgttaccattg	Protospacer
**.*****************************

12. spacer 1.3|2377419|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046383 (Klebsiella pneumoniae strain BD_DM_782 plasmid punnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

gatgattgcgctcggatcacttgttaccattg	CRISPR spacer
gacgattgcgctcggatcacttgttaccattg	Protospacer
**.*****************************

13. spacer 1.3|2377419|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 1, identity: 0.969

gatgattgcgctcggatcacttgttaccattg	CRISPR spacer
gacgattgcgctcggatcacttgttaccattg	Protospacer
**.*****************************

14. spacer 1.3|2377419|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK416014 (Klebsiella phage ST16-OXA48phi5.3, complete genome) position: , mismatch: 1, identity: 0.969

gatgattgcgctcggatcacttgttaccattg	CRISPR spacer
gacgattgcgctcggatcacttgttaccattg	Protospacer
**.*****************************

15. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271400 (Klebsiella phage 6 LV-2017, complete genome) position: , mismatch: 1, identity: 0.969

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagctcagcg	Protospacer
*******************************.

16. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 1, identity: 0.969

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gaccttgtcccccatcgcttcgccgaggtcgg	Protospacer
********* **********************

17. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 1, identity: 0.969

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gaccttgtcccccatcgcttcgccgaggtcgg	Protospacer
********* **********************

18. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 1, identity: 0.969

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggcagccaccttgtcgcaatg	Protospacer
************** *****************

19. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 1, identity: 0.969

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggcagccaccttgtcgcaatg	Protospacer
************** *****************

20. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 1, identity: 0.969

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggcagccaccttgtcgcaatg	Protospacer
************** *****************

21. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MH370387 (Salmonella phage S149, complete genome) position: , mismatch: 1, identity: 0.969

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggcagccaccttgtcgcaatg	Protospacer
************** *****************

22. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MG407615 (Salmonella phage Bp96115, partial genome) position: , mismatch: 1, identity: 0.969

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggcagccaccttgtcgcaatg	Protospacer
************** *****************

23. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_005841 (Enterobacteria phage ST104 DNA, complete genome) position: , mismatch: 1, identity: 0.969

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggcagccaccttgtcgcaatg	Protospacer
************** *****************

24. spacer 1.1|2377297|32|NZ_CP022348|CRT matches to MK714353 (Klebsiella phage ST13-OXA48phi12.5, complete genome) position: , mismatch: 2, identity: 0.938

gtgtattgaactgttgccacgtttcctccggg	CRISPR spacer
gggtattgaacagttgccacgtttcctccggg	Protospacer
* ********* ********************

25. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to HG918041 (Klebsiella pneumoniae Kp15 plasmid pENVA complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctaccagctcagcg	Protospacer
 ******************************.

26. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN543575 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_fusion, complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccaccgcctctaccagctcagcg	Protospacer
************ ******************.

27. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN543576 (Klebsiella pneumoniae strain GH44TC plasmid pGH44TC_vir, complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccaccgcctctaccagctcagcg	Protospacer
************ ******************.

28. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccaccgcctctaccagctcagcg	Protospacer
************ ******************.

29. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccaccgcctctaccagctcagcg	Protospacer
************ ******************.

30. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccaccgcctctaccagctcagcg	Protospacer
************ ******************.

31. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032356 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_Vir, complete sequence) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccaccgcctctaccagctcagcg	Protospacer
************ ******************.

32. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK416010 (Klebsiella phage ST11-OXA245phi3.2, complete genome) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctactagctcagcg	Protospacer
**********************.********.

33. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MG432137 (Pectobacterium phage PEAT2, complete genome) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagctcaact	Protospacer
*****************************.*

34. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK416022 (Klebsiella phage ST846-OXA48phi9.2, complete genome) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcatca	Protospacer
************************** ** **

35. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 2, identity: 0.938

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcatca	Protospacer
************************** ** **

36. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 2, identity: 0.938

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gaccttatcgcccattgcttcgccgaggtcgg	Protospacer
******.********.****************

37. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 2, identity: 0.938

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gactttgtcgcccatcgcttcgccgaggtcag	Protospacer
***.**************************.*

38. spacer 1.13|2378029|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK714353 (Klebsiella phage ST13-OXA48phi12.5, complete genome) position: , mismatch: 2, identity: 0.938

caggccggtcgccagccgacactgtgggtgcg	CRISPR spacer
caggccggtcgccagccgacgctgtgggtccg	Protospacer
********************.******** **

39. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gcgccttctccagcgcctctaccagc-tcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcaatagc-	Protospacer
**************************  .***

40. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 4, identity: 0.875

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctaccagcgcaaga	Protospacer
 ************************* **. *

41. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 4, identity: 0.875

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgaga	Protospacer
************************** *.. *

42. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK714353 (Klebsiella phage ST13-OXA48phi12.5, complete genome) position: , mismatch: 4, identity: 0.875

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgaga	Protospacer
************************** *.. *

43. spacer 1.3|2377419|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 5, identity: 0.844

gatgattgcgctcggatcacttgttaccattg	CRISPR spacer
caccatcgcactcggatcacttgttaccattg	Protospacer
 *. **.**.**********************

44. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK416013 (Klebsiella phage ST16-OXA48phi5.1, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgagg	Protospacer
************************** *.. .

45. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgagg	Protospacer
************************** *.. .

46. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MT682064 (Klebsiella virus KpV2811, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgagg	Protospacer
************************** *.. .

47. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN855851 (Bacteriophage sp. isolate 246, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgagg	Protospacer
************************** *.. .

48. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgatg	Protospacer
************************** *....

49. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN013086 (Klebsiella phage vB_Kpn_Chronis, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcgagg	Protospacer
************************** *.. .

50. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044178 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctctagcgcctctaccagcgcgtta	Protospacer
**********.*************** *. .*

51. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcccctaccagcgccaga	Protospacer
*****************.******** * . *

52. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN582098 (Podoviridae sp. ctKoA10, complete genome) position: , mismatch: 5, identity: 0.844

gcgccttctccagcgcctctacc---agctcagca	CRISPR spacer
gcgccgtgtccagcgcctctaccactagctca---	Protospacer
***** * ***************   ******

53. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN602881 (Erwinia phage Midgardsormr38, complete genome) position: , mismatch: 5, identity: 0.844

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
agtttgcgtaaggctgcaaccttatcgcaggt	Protospacer
***************** *****.*****.

54. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctaccagcgcgagg	Protospacer
 ************************* *.. .

55. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctagcagcgcgagg	Protospacer
********************* **** *.. .

56. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MT251347 (Klebsiella phage LASTA, complete genome) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgcctcctccagcgcctctaccagcgcgagg	Protospacer
******.******************* *.. .

57. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MT251348 (Klebsiella phage SJM3, complete genome) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgcctcctccagcgcctctaccagcgcgagg	Protospacer
******.******************* *.. .

58. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
ccgccttctccagcgcccctacctgctccggg	Protospacer
 ****************.***** **** * .

59. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY271395 (Klebsiella phage 2b LV-2017, complete genome) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctagcagtgccaga	Protospacer
********************* ***. * . *

60. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctagcaaccccgaa	Protospacer
 ******************** **.*.* * *

61. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctagcaaccccgaa	Protospacer
 ******************** **.*.* * *

62. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctagcaaccccgaa	Protospacer
 ******************** **.*.* * *

63. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctagcaaccccgaa	Protospacer
 ******************** **.*.* * *

64. spacer 1.11|2377907|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

cgttttgatcaggccgccgaattcgacggacg	CRISPR spacer
ctttgcgatcaggccgccgaactggacggaca	Protospacer
* ** .***************.* *******.

65. spacer 1.13|2378029|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK327140 (Klebsiella phage YX3973, complete genome) position: , mismatch: 6, identity: 0.812

caggccggtcgccagccgacactgtgggtgcg	CRISPR spacer
aaagcgcgtcgccagccatcactgtgggtgcg	Protospacer
 *.**  **********. *************

66. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014649 (Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctctaccaatgcgaga	Protospacer
*** ********************.. *.. *

67. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_021654 (Klebsiella pneumoniae plasmid pKN-LS6, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctctaccaatgcgaga	Protospacer
*** ********************.. *.. *

68. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP007729 (Klebsiella pneumoniae subsp. pneumoniae KPNIH10 plasmid pKPN-498, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctctaccaatgcgaga	Protospacer
*** ********************.. *.. *

69. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP037929 (Klebsiella pneumoniae subsp. pneumoniae strain KP-8788 plasmid pKPN-IT-8788, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctctaccaatgcgaga	Protospacer
*** ********************.. *.. *

70. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN922301 (Klebsiella pneumoniae strain KP-14159 plasmid pKPN-IT-14159, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctctaccaatgcgaga	Protospacer
*** ********************.. *.. *

71. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK422448 (Klebsiella phage ST512-KPC3phi13.3, complete genome) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctctaccaatgcgaga	Protospacer
*** ********************.. *.. *

72. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MK422450 (Klebsiella phage ST13-OXA48phi12.4, complete genome) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctataagcgcgagg	Protospacer
*********************. *** *.. .

73. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_009425 (Enterobacter sp. 638 plasmid pENTE01, complete sequence) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
ccgccttctccagcgcttctgccagcgcggtt	Protospacer
 ***************.***.***** *.*.

74. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MH399779 (Microbacterium phage Jacko, complete genome) position: , mismatch: 7, identity: 0.781

gcgccttctccagcgcctctacca---gctcagca	CRISPR spacer
tggccttctccagcgcctcgaccaggggctcc---	Protospacer
  ***************** ****   ****

75. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to FN582354 (Enterobacteria phage phi80 partial sequence 5' end) position: , mismatch: 7, identity: 0.781

gcgccttc-tccagcgcctctaccagctcagca	CRISPR spacer
-catcaccatccagctcctcttccagctcagca	Protospacer
 *..* .* ****** ***** ***********

76. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_021190 (Enterobacteria phage phi80, complete genome) position: , mismatch: 7, identity: 0.781

gcgccttc-tccagcgcctctaccagctcagca	CRISPR spacer
-catcaccatccagctcctcttccagctcagca	Protospacer
 *..* .* ****** ***** ***********

77. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 7, identity: 0.781

gaccttgt---cgcccatcgcttcgccgaggtcgg	CRISPR spacer
---ctcgtgcccgcccatcggctcgccgaggtcga	Protospacer
   **.**   ********* .************.

78. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.781

gaccttgt---cgcccatcgcttcgccgaggtcgg	CRISPR spacer
---ctcgtgcccgcccatcggctcgccgaggtcga	Protospacer
   **.**   ********* .************.

79. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MG983840 (Escherichia phage myPSH1131, complete genome) position: , mismatch: 7, identity: 0.781

agtttgcgtaaggctgccaccttgtcgcaatg-	CRISPR spacer
ggtttgcgtaaggctgctaacttg-agcagcgg	Protospacer
.****************.* ****  ***..*

80. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MG976803 (Escherichia phage myPSH2311, complete genome) position: , mismatch: 7, identity: 0.781

agtttgcgtaaggctgccaccttgtcgcaatg-	CRISPR spacer
ggtttgcgtaaggctgctaacttg-agcagcgg	Protospacer
.****************.* ****  ***..*

81. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN508615 (UNVERIFIED: Escherichia phage ES17, complete genome) position: , mismatch: 7, identity: 0.781

agtttgcgtaaggctgccaccttgtcgcaatg-	CRISPR spacer
ggtttgcgtaaggctgctaacttg-agcagcgg	Protospacer
.****************.* ****  ***..*

82. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP015755 (Klebsiella pneumoniae strain W14 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctaccagagtgatg	Protospacer
 ************************  .....

83. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016161 (Klebsiella pneumoniae strain TH1 isolate TH1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctaccagagtgatg	Protospacer
 ************************  .....

84. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF144193 (Klebsiella pneumoniae strain 205880 plasmid p205880-NR1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tcgccttctccagcgcctctaccagagtgatg	Protospacer
 ************************  .....

85. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_019789 (Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE01, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tccgcttcgccagcgcctcgaccagctcgccg	Protospacer
 *  **** ********** ********. *.

86. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_012527 (Deinococcus deserti VCD115 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
ccgcctgcttcagcgcctctaccacttccggg	Protospacer
 ***** **.************** .** * .

87. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014767 (Pontibacter akesuensis strain AKS 1T plasmid Paks1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gaaccttctccagctcctgtaccagccaaaga	Protospacer
* .*********** *** *******. *. *

88. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694325 (Marine virus AFVG_250M692, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

89. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694099 (Marine virus AFVG_250M963, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

90. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KX987127 (Thermus phage G20c, complete genome) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
ggtacttctccagcgcggctaccagcttggcg	Protospacer
*   ************  *********..**.

91. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694602 (Marine virus AFVG_250M1128, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

92. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694553 (Marine virus AFVG_250M961, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

93. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694728 (Marine virus AFVG_250M962, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt---ctccagcgcctctaccagctcagca	CRISPR spacer
---ttttagactccagctcctccaccagctcagta	Protospacer
   ..**   ******* ****.**********.*

94. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694378 (Marine virus AFVG_250M964, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

95. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694090 (Marine virus AFVG_250M1127, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

96. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to EU100883 (Thermus phage P23-45, complete genome) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
ggtacttctccagcgcggctaccagcttggcg	Protospacer
*   ************  *********..**.

97. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_009804 (Thermus phage P74-26, complete genome) position: , mismatch: 8, identity: 0.75

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
ggtacttctccagcgcggctaccagcttggcg	Protospacer
*   ************  *********..**.

98. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694691 (Marine virus AFVG_250M693, complete genome) position: , mismatch: 8, identity: 0.75

gcgcctt----ctccagcgcctctaccagctcagca	CRISPR spacer
----tttaggactccagctcctccaccagctcagta	Protospacer
    .**    ******* ****.**********.*

99. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gtcgagcgcgcccagcgcttcgccgaggccgg	Protospacer
* *     ****** *************.***

100. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gtcgagcgcgcccagcgcttcgccgaggccgg	Protospacer
* *     ****** *************.***

101. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gtcgagcgcgcccagcgcttcgccgaggccgg	Protospacer
* *     ****** *************.***

102. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR134447 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
caggtcgaagcccatcgcatcgccgaggccgg	Protospacer
 *  *.*  ********* *********.***

103. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gatttccgcgcccaccgcttcggcgaggtcga	Protospacer
**..*.  ******.******* ********.

104. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gatttccgcgcccaccgcttcggcgaggtcga	Protospacer
**..*.  ******.******* ********.

105. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010760 (Phaeobacter inhibens strain P80 plasmid pP80_d, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gatcttgccgcccatcgcttcgcgcgcgtcat	Protospacer
**.****.***************  . ***.

106. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010603 (Phaeobacter inhibens strain P83 plasmid pP83_d, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gatcttgccgcccatcgcttcgcgcgcgtcat	Protospacer
**.****.***************  . ***.

107. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010709 (Phaeobacter inhibens strain P66 plasmid pP66_d, complete sequence) position: , mismatch: 8, identity: 0.75

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
gatcttgccgcccatcgcttcgcgcgcgtcat	Protospacer
**.****.***************  . ***.

108. spacer 1.13|2378029|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN855929 (Bacteriophage sp. isolate 476, complete genome) position: , mismatch: 8, identity: 0.75

caggccggtcgccagccgacactgtgggtgcg	CRISPR spacer
ggcgcagcccgccagcctacactgtgggttcg	Protospacer
 . ** * .******** *********** **

109. spacer 1.16|2378212|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to LT614807 (Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.75

-catataagcagcaagccagtctctaactttac	CRISPR spacer
tcaggt-agcagcaagtcagtctttaacttctg	Protospacer
 ** .* *********.******.******.

110. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.75

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatcgcggccctgcctcttgcgttccgcgttg	Protospacer
.*..*.*  **** ***** ************

111. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 8, identity: 0.75

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatcgcggccctgcctcttgcgttccgcgttg	Protospacer
.*..*.*  **** ***** ************

112. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.75

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatcgcggccctgcctcttgcgttccgcgttg	Protospacer
.*..*.*  **** ***** ************

113. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.75

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatcgcggccctgcctcttgcgttccgcgttg	Protospacer
.*..*.*  **** ***** ************

114. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.75

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatcgcggccctgcctcttgcgttccgcgttg	Protospacer
.*..*.*  **** ***** ************

115. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 8, identity: 0.75

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatcgcggccctgcctcttgcgttccgcgttg	Protospacer
.*..*.*  **** ***** ************

116. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033380 (Escherichia coli strain L73 plasmid pL73-3, complete sequence) position: , mismatch: 9, identity: 0.719

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tccgcttctccagctcctcgaccagctcgagg	Protospacer
 *  ********** **** ********.. .

117. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033801 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tccgcttctccagctcctcgaccagctcgagg	Protospacer
 *  ********** **** ********.. .

118. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KM107845 (Escherichia coli strain G5 plasmid pSYM9, complete sequence) position: , mismatch: 9, identity: 0.719

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
tccgcttctccagctcctcgaccagctcgagg	Protospacer
 *  ********** **** ********.. .

119. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 9, identity: 0.719

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgacttctccagcgcctcgacccggcggccg	Protospacer
*** *************** *** * . . *.

120. spacer 1.11|2377907|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026221 (Aeromonas sp. ASNIH4 plasmid pAER-f909, complete sequence) position: , mismatch: 9, identity: 0.719

cgttttgatcaggccgccgaattcgacggacg	CRISPR spacer
acaggtattcaggccgccgacttcgccggacg	Protospacer
     *. ************ **** ******

121. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
acccagatcgccgatcgcctcgccgaggtcat	Protospacer
. **  .***** *****.***********.

122. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MH113815 (Pseudomonas phage Alpheus, complete genome) position: , mismatch: 9, identity: 0.719

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
ctccttgtcgcccttctcttcgccgccttcct	Protospacer
  *********** ** ********   **

123. spacer 1.18|2378334|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 9, identity: 0.719

agagcgcctgagcatgagccaaacgtataatc	CRISPR spacer
cgagcgcttcagcatgagccaaacgcacctcg	Protospacer
 ******.* ***************.*.  .

124. spacer 1.19|2378395|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to LR214956 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

gagatagttatttacatcaacgttaatataac	CRISPR spacer
ctaaaaattatttacattaatgttaatatatt	Protospacer
  .* *.**********.**.********* .

125. spacer 1.19|2378395|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 9, identity: 0.719

gagatagttatttacatcaacgttaatataac	CRISPR spacer
ctaaaaattatttacattaatgttaatatatt	Protospacer
  .* *.**********.**.********* .

126. spacer 1.19|2378395|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 9, identity: 0.719

gagatagttatttacatcaacgttaatataac	CRISPR spacer
ctaaaaattatttacattaatgttaatatatt	Protospacer
  .* *.**********.**.********* .

127. spacer 1.19|2378395|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to LR214959 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.719

gagatagttatttacatcaacgttaatataac	CRISPR spacer
ctaaaaattatttacattaatgttaatatatt	Protospacer
  .* *.**********.**.********* .

128. spacer 1.19|2378395|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to LR214960 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 6) position: , mismatch: 9, identity: 0.719

gagatagttatttacatcaacgttaatataac	CRISPR spacer
ctaaaaattatttacattaatgttaatatatt	Protospacer
  .* *.**********.**.********* .

129. spacer 1.19|2378395|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gagatagttatttacatcaacgttaatataac	CRISPR spacer
agaagacatatctacatcatcgttaatataag	Protospacer
...* *  ***.******* ***********

130. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

131. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

132. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

133. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

134. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

135. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

136. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

137. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

138. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

139. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

140. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gctcgcggccctgcctcttccgttcggcgttg	Protospacer
. ..*.*  **** *********** ******

141. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
gatctcggccctgcctcttgcgttccgcgttg	Protospacer
.*.. .*  **** ***** ************

142. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

143. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

144. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

145. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

146. spacer 1.20|2378456|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.719

aactgtgtgcctggctcttccgttccgcgttg	CRISPR spacer
ggtcgcggccctgcctcttgcgttccgcgttg	Protospacer
....*.*  **** ***** ************

147. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.688

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
cctacttctccagtgcctcgaccagctggctc	Protospacer
 *  *********.***** ******* . .

148. spacer 1.12|2377968|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 10, identity: 0.688

gaccttgtcgcccatcgcttcgccgaggtcgg	CRISPR spacer
cagcttgtcgcctatcgcttcggcgactggaa	Protospacer
 * *********.********* ***    ..

149. spacer 1.16|2378212|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN013084 (Klebsiella phage vB_KaeM_KaAlpha, complete genome) position: , mismatch: 10, identity: 0.688

catataagcagcaagccagtctctaactttac	CRISPR spacer
tcaagtagcagcaagtcagtctttaacttctg	Protospacer
.  *  *********.******.******.

150. spacer 1.16|2378212|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN693619 (Marine virus AFVG_250M78, complete genome) position: , mismatch: 10, identity: 0.688

catataagcagcaagccagtctctaactttac	CRISPR spacer
ttgctgggcagcaagccattctctaattttgt	Protospacer
.   *..*********** *******.***..

151. spacer 1.16|2378212|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MN694388 (Marine virus AFVG_250M79, complete genome) position: , mismatch: 10, identity: 0.688

catataagcagcaagccagtctctaactttac	CRISPR spacer
ttgctgggcagcaagccattctctaattttgt	Protospacer
.   *..*********** *******.***..

152. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_016138 (Pseudomonas aeruginosa plasmid pUM505, complete sequence) position: , mismatch: 11, identity: 0.656

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
gcaaggcgggaggctgccaccttgtcgctcca	Protospacer
.    *** .******************  ..

153. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030914 (Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence) position: , mismatch: 11, identity: 0.656

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
gcaaggcgggaggctgccaccttgtcgctcca	Protospacer
.    *** .******************  ..

154. spacer 1.14|2378090|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_019202 (Pseudomonas aeruginosa plasmid pKLC102, complete sequence) position: , mismatch: 11, identity: 0.656

agtttgcgtaaggctgccaccttgtcgcaatg	CRISPR spacer
gcaaggcgggaggctgccaccttgtcgctcca	Protospacer
.    *** .******************  ..

155. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MF574151 (Vibrio phage JSF25, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

156. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883643 (Vibrio phage JSF28, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

157. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to HQ641344 (Vibrio phage ICP3_2007_A, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

158. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883646 (Vibrio phage JSF32, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

159. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883651 (Vibrio phage JSF20, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

160. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_015159 (Vibrio phage ICP3, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

161. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883644 (Vibrio phage JSF30, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

162. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_013651 (Vibrio phage N4, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

163. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to JQ780163 (Vibrio phage VP3, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

164. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to HQ641342 (Vibrio phage ICP3_2009_A, partial genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

165. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883641 (Vibrio phage JSF11, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

166. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NC_007149 (Vibriophage VP4, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

167. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883653 (Vibrio phage JSF34, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

168. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to FJ409640 (Vibriophage N4, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

169. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to HQ641341 (Vibrio phage ICP3_2009_B, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

170. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to MG957431 (Vibrio phage Rostov-1, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

171. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883650 (Vibrio phage JSF18, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

172. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883645 (Vibrio phage JSF31, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

173. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to HQ641343 (Vibrio phage ICP3_2008_A, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

174. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883649 (Vibrio phage JSF36, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

175. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883652 (Vibrio phage JSF24, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

176. spacer 1.15|2378151|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to KY883648 (Vibrio phage JSF35, complete genome) position: , mismatch: 11, identity: 0.656

ctgagaggttgacttatagatgacctcggttc	CRISPR spacer
atgagagtttcacttatagatgactcacagaa	Protospacer
 ****** ** *************..  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4343 : 11593

Klebsiella_phage(42.86%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157698326.1\|4343_4667_+	DUF3168 domain-containing protein	K7PM93	Enterobacterial_phage	1.2e-26	59.0
WP_014838146.1\|4723_5434_+\|tail	tail protein	K7PHL2	Enterobacterial_phage	9.9e-85	69.5
WP_089046352.1\|5504_5870_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	2.0e-28	54.5
WP_014838149.1\|6631_10237_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	4.7e-207	55.4
WP_042934071.1\|10257_10731_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.2e-55	63.2
WP_014838151.1\|10717_11203_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	2.3e-53	66.2
WP_042934072.1\|11212_11593_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.2e-57	81.0

DBSCAN-SWA_2

239583 : 274628

Cronobacter_phage(16.67%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014838267.1\|239583_240927_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_014838268.1\|240923_241589_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_042934081.1\|241585_243274_+	OmpA family protein	NA	NA	NA	NA
WP_014838270.1\|243418_243910_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_089046359.1\|244156_246799_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.6e-95	32.3
WP_014838274.1\|246795_249291_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.8e-19	33.0
WP_014838275.1\|249543_251511_+	membrane protein	A0A077K801	Ralstonia_phage	1.7e-62	32.4
WP_014229081.1\|251512_251773_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_014838276.1\|251772_253206_+	hypothetical protein	NA	NA	NA	NA
WP_124235024.1\|253212_256581_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_014838278.1\|256676_256955_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_014838279.1\|256967_258728_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_014838280.1\|258691_259777_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_032749377.1\|259754_260294_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_014838282.1\|260295_260751_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_014838283.1\|260774_262109_+	hypothetical protein	NA	NA	NA	NA
WP_014838284.1\|262271_263951_-	glycoside hydrolase family 43 protein	NA	NA	NA	NA
WP_014838285.1\|264005_265460_-	MFS transporter	NA	NA	NA	NA
WP_001339197.1\|265695_266904_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_000428546.1\|267417_268011_+	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_001089068.1\|268123_269329_-	tetracycline efflux MFS transporter Tet(B)	A0A2H4UVM2	Bodo_saltans_virus	3.0e-09	24.4
WP_001322387.1\|269407_270034_+	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001284954.1\|270011_270698_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000460651.1\|270705_271092_-	hypothetical protein	NA	NA	NA	NA
WP_000562370.1\|271084_271405_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_000599533.1\|271848_273054_+	sodium/glutamate symporter	NA	NA	NA	NA
WP_001352368.1\|273419_274628_-\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0

DBSCAN-SWA_3

315037 : 320421

Enterobacterial_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009653037.1\|315037_315574_+	helix-turn-helix transcriptional regulator	K7PKK1	Enterobacteria_phage	5.2e-30	49.7
WP_014229124.1\|316034_316397_+	hypothetical protein	C6ZR44	Salmonella_phage	7.1e-31	57.5
WP_014838313.1\|316473_316866_+	membrane protein	K7PHB9	Enterobacterial_phage	6.5e-38	65.4
WP_032749344.1\|316855_317128_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.2e-16	55.4
WP_014838315.1\|317135_317678_+	glycoside hydrolase family 108 protein	A0A0U2I1S0	Escherichia_phage	4.0e-70	66.9
WP_032693413.1\|317904_318270_+	hypothetical protein	NA	NA	NA	NA
WP_004101621.1\|318597_318870_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_014229134.1\|318866_319307_-	heat shock protein HslJ	NA	NA	NA	NA
WP_004112629.1\|319431_320421_-	2-hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	1.9e-70	45.7

DBSCAN-SWA_4

979213 : 1030542

Escherichia_phage(40.0%)

integrase,plate,protease

attL 973034:973050|attR 996410:996426

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
973034:973050	attL	NA	NA	NA	NA
WP_014229630.1\|979213_979762_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	7.2e-51	51.9
WP_014229631.1\|980218_980737_+	fimbrial protein	NA	NA	NA	NA
WP_014229632.1\|980837_981527_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_089046369.1\|981586_984157_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_042934104.1\|984172_985174_+	fimbrial protein	NA	NA	NA	NA
WP_014229635.1\|985219_985747_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_014838689.1\|985784_986336_-\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	2.6e-53	55.1
WP_014229637.1\|986740_987412_+	cyclic nucleotide-binding protein	NA	NA	NA	NA
WP_014838691.1\|987526_988435_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_004851627.1\|988750_988891_+	hypothetical protein	NA	NA	NA	NA
WP_014229639.1\|988921_989092_-	sodium:proton antiporter	NA	NA	NA	NA
WP_004136705.1\|989855_990068_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_014229640.1\|990096_990969_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	4.3e-05	27.3
WP_004851637.1\|991075_991855_+	acetolactate decarboxylase	NA	NA	NA	NA
WP_014838692.1\|991865_993545_+	acetolactate synthase AlsS	NA	NA	NA	NA
WP_014838693.1\|993568_994339_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA
WP_014838694.1\|994395_995466_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-28	32.4
WP_014229644.1\|995458_997228_-	iron ABC transporter permease	NA	NA	NA	NA
996410:996426	attR	NA	NA	NA	NA
WP_014838695.1\|997299_998388_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014838696.1\|998888_999434_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_014229647.1\|999411_1000497_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014838697.1\|1000460_1002215_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_071881737.1\|1002314_1002593_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_014838699.1\|1003082_1006553_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_032719380.1\|1006549_1007773_-	hypothetical protein	NA	NA	NA	NA
WP_042934106.1\|1007859_1008669_-	hypothetical protein	NA	NA	NA	NA
WP_032719381.1\|1008702_1009503_-	hypothetical protein	NA	NA	NA	NA
WP_042934107.1\|1009536_1010337_-	hypothetical protein	NA	NA	NA	NA
WP_042945317.1\|1010370_1011180_-	hypothetical protein	NA	NA	NA	NA
WP_038424617.1\|1011213_1012020_-	hypothetical protein	NA	NA	NA	NA
WP_014838702.1\|1012031_1015169_-	hypothetical protein	NA	NA	NA	NA
WP_042934367.1\|1016006_1016747_-	hypothetical protein	NA	NA	NA	NA
WP_089046370.1\|1016851_1017616_-	hypothetical protein	NA	NA	NA	NA
WP_014838705.1\|1017720_1018446_-	hypothetical protein	NA	NA	NA	NA
WP_077253191.1\|1018550_1019291_-	hypothetical protein	NA	NA	NA	NA
WP_042934109.1\|1019391_1022511_-	hypothetical protein	NA	NA	NA	NA
WP_014838708.1\|1022535_1023408_-	hypothetical protein	NA	NA	NA	NA
WP_014838709.1\|1023407_1025750_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.7e-03	25.0
WP_089046371.1\|1025746_1026112_-\|protease	Clp protease	NA	NA	NA	NA
WP_014838711.1\|1026398_1026890_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_014838713.1\|1028515_1029205_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_014838714.1\|1029201_1030542_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_5

1543286 : 1551865

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014838941.1\|1543286_1544291_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	2.3e-31	29.2
WP_004138729.1\|1544763_1544886_+	small membrane protein	NA	NA	NA	NA
WP_014838943.1\|1545466_1546633_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	1.8e-112	54.5
WP_014230057.1\|1546806_1547361_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	7.3e-51	56.7
WP_014230058.1\|1547376_1548267_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.4e-27	32.1
WP_004122480.1\|1548298_1549168_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.7e-110	67.7
WP_014838944.1\|1549181_1550246_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.4e-104	54.4
WP_014838945.1\|1550458_1551865_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.3e-39	28.9

DBSCAN-SWA_6

1609734 : 1679595

Escherichia_phage(36.36%)

transposase,tail,capsid,portal,holin,terminase,plate,head,coat,lysis,integrase,tRNA

attL 1613818:1613840|attR 1646773:1646795

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014838977.1\|1609734_1611270_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	6.3e-28	27.6
WP_014230101.1\|1611266_1611989_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	2.4e-30	32.7
WP_014230102.1\|1612307_1613669_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	4.7e-200	91.8
1613818:1613840	attL	NA	NA	NA	NA
WP_071886339.1\|1613938_1614160_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	2.2e-27	72.6
WP_014838979.1\|1614244_1615402_-	phage late control D family protein	Q7Y4C6	Escherichia_virus	8.6e-171	79.2
WP_042934389.1\|1615401_1615881_-\|tail	phage tail protein	A0A0F7LBX3	Escherichia_phage	6.5e-64	86.7
WP_014838981.1\|1615892_1618331_-\|tail	phage tail tape measure protein	U5N0T4	Enterobacteria_phage	1.4e-308	74.9
WP_014838982.1\|1618323_1618443_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.6e-14	89.7
WP_014838983.1\|1618475_1618751_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	3.2e-31	76.7
WP_014838984.1\|1618811_1619327_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	8.5e-70	76.2
WP_014838985.1\|1619340_1620522_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.9e-195	86.6
WP_089046380.1\|1620632_1621706_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	8.6e-40	53.0
WP_014838987.1\|1621757_1622876_-	hypothetical protein	A0A248XD67	Klebsiella_phage	5.8e-55	38.0
WP_042934131.1\|1622885_1624835_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	3.9e-06	50.9
WP_014838989.1\|1624914_1625496_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.6e-53	54.6
WP_014838990.1\|1625503_1626412_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.1e-112	71.5
WP_014838991.1\|1626416_1626764_-\|plate	baseplate assembly protein	Q7Y4D7	Escherichia_virus	8.3e-45	77.4
WP_042934132.1\|1626760_1627402_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	1.7e-91	77.0
WP_014838993.1\|1627800_1628757_-	hypothetical protein	NA	NA	NA	NA
WP_042934133.1\|1628799_1629720_-	hypothetical protein	NA	NA	NA	NA
WP_014838995.1\|1629920_1630370_-	phage virion morphogenesis protein	O80313	Escherichia_phage	2.5e-49	68.7
WP_014838996.1\|1630362_1630830_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	2.4e-63	75.5
WP_014838998.1\|1630925_1631357_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	9.0e-41	65.5
WP_014838999.1\|1631353_1631851_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	1.1e-79	85.5
WP_004175164.1\|1631837_1632128_-\|holin	holin	O80308	Escherichia_phage	1.2e-36	84.7
WP_014839000.1\|1632132_1632336_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	4.2e-25	80.6
WP_014839001.1\|1632335_1632842_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	7.8e-60	82.8
WP_014839002.1\|1632938_1633682_-\|terminase	terminase endonuclease subunit	Q94MJ2	Enterobacteria_phage	1.6e-98	79.1
WP_014839003.1\|1633685_1634744_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	1.5e-161	81.8
WP_014839004.1\|1634817_1635672_-\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	2.8e-126	79.6
WP_014839005.1\|1635837_1637607_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	3.7e-306	87.8
WP_014839006.1\|1637606_1638650_+\|portal	phage portal protein	M1SV64	Escherichia_phage	5.2e-167	82.4
WP_014839007.1\|1639356_1639788_+	hypothetical protein	S4TUD6	Salmonella_phage	1.1e-67	90.2
WP_089046381.1\|1639920_1640961_+	Fic family protein	S4TP71	Salmonella_phage	7.0e-164	80.3
WP_049824829.1\|1641342_1643631_-	replication endonuclease	U5N0W3	Enterobacteria_phage	0.0e+00	74.3
WP_014839009.1\|1643620_1643896_-	hypothetical protein	M1TAP2	Escherichia_phage	1.5e-25	61.5
WP_014839010.1\|1643912_1644128_-	DUF2732 family protein	NA	NA	NA	NA
WP_042934135.1\|1644192_1644693_-	hypothetical protein	M1SV55	Escherichia_phage	6.1e-81	86.1
WP_016831472.1\|1644862_1645138_-	hypothetical protein	Q1JS60	Enterobacteria_phage	4.0e-42	85.7
WP_016831471.1\|1645260_1645560_+	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	5.7e-34	69.7
WP_014839012.1\|1645674_1646688_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	4.0e-164	82.5
WP_009654032.1\|1646868_1647762_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	8.8e-14	28.9
1646773:1646795	attR	NA	NA	NA	NA
WP_014230103.1\|1647762_1648233_-	hypothetical protein	NA	NA	NA	NA
WP_038423091.1\|1648219_1649020_-	CadC family transcriptional regulator	NA	NA	NA	NA
WP_014230105.1\|1649436_1650210_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-27	37.7
WP_014230106.1\|1650220_1651084_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-11	28.5
WP_014230107.1\|1651055_1651961_-	ABC transporter permease	NA	NA	NA	NA
WP_014839013.1\|1651957_1652995_-	ABC transporter permease	NA	NA	NA	NA
WP_014839014.1\|1652991_1654614_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_042934136.1\|1654733_1655888_-	mandelate racemase	NA	NA	NA	NA
WP_014839017.1\|1656187_1656850_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_004852573.1\|1656898_1658176_-	MFS transporter	NA	NA	NA	NA
WP_014839018.1\|1658245_1659709_-	xylulokinase	NA	NA	NA	NA
WP_014839019.1\|1659718_1661086_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	4.7e-43	28.0
WP_014839020.1\|1661292_1662234_+	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_042934137.1\|1662248_1663250_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_014230117.1\|1663529_1664258_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_014839022.1\|1664288_1665896_+	FGGY-family carbohydrate kinase	NA	NA	NA	NA
WP_004852587.1\|1665990_1667043_-	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_014230119.1\|1667292_1668576_+	MFS transporter	NA	NA	NA	NA
WP_014839024.1\|1668572_1669577_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	5.4e-12	26.3
WP_014839025.1\|1669573_1670530_+	sugar kinase	NA	NA	NA	NA
WP_004122693.1\|1670503_1671250_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_004852589.1\|1671306_1672107_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_014839026.1\|1672103_1672877_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_020244646.1\|1673214_1673922_-	hypothetical protein	NA	NA	NA	NA
WP_014839027.1\|1675358_1675862_+	hypothetical protein	NA	NA	NA	NA
WP_020244644.1\|1676933_1678220_+	hypothetical protein	NA	NA	NA	NA
WP_001339197.1\|1678386_1679595_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0

DBSCAN-SWA_7

1781744 : 1836216

Pseudomonas_phage(18.18%)

plate,protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014230184.1\|1781744_1782197_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_032693685.1\|1782189_1782732_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_032693684.1\|1782706_1783810_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_014839078.1\|1783764_1785528_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_032693683.1\|1785551_1786286_-	hypothetical protein	NA	NA	NA	NA
WP_014230189.1\|1786350_1786545_-	hypothetical protein	NA	NA	NA	NA
WP_014839080.1\|1786534_1786897_-	type VI secretion protein	NA	NA	NA	NA
WP_014230191.1\|1786896_1790316_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_014839082.1\|1790302_1791463_-	hypothetical protein	NA	NA	NA	NA
WP_014230193.1\|1791466_1791733_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_014230194.1\|1791762_1792443_-	hypothetical protein	NA	NA	NA	NA
WP_014230195.1\|1792439_1794344_-	LysM peptidoglycan-binding domain-containing protein	S6BFI4	Thermus_phage	3.2e-05	53.5
WP_014230196.1\|1794352_1794892_-	hypothetical protein	NA	NA	NA	NA
WP_014839083.1\|1794884_1797500_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_014230199.1\|1797791_1798433_-	hypothetical protein	NA	NA	NA	NA
WP_014839086.1\|1800042_1800534_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_014839087.1\|1800538_1802167_-	OmpA family protein	NA	NA	NA	NA
WP_014839088.1\|1802266_1802920_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_014839089.1\|1802916_1804254_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_014230204.1\|1804272_1805823_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_014230205.1\|1805859_1806357_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_009653963.1\|1807338_1808445_+	AI-2E family transporter	NA	NA	NA	NA
WP_014230206.1\|1808647_1809139_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_014230207.1\|1809183_1810818_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_014230208.1\|1811097_1812345_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	9.5e-67	44.3
WP_014230209.1\|1812307_1813744_-	magnesium transporter	NA	NA	NA	NA
WP_014230210.1\|1813912_1815556_-	multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-08	22.6
WP_014839091.1\|1815632_1816283_-	DNA oxidative demethylase AlkB	NA	NA	NA	NA
WP_014839092.1\|1816282_1817347_-	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	L7Y5F8	Megavirus	1.4e-18	47.2
WP_014230213.1\|1817419_1818472_-	FAD:protein FMN transferase ApbE	NA	NA	NA	NA
WP_014230214.1\|1818574_1819693_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.9e-119	60.5
WP_014230215.1\|1820464_1823125_+	phosphotransferase RcsD	NA	NA	NA	NA
WP_004103995.1\|1823141_1823792_+	transcriptional regulator RcsB	NA	NA	NA	NA
WP_014839093.1\|1823836_1826683_-	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	7.5e-43	26.3
WP_014839094.1\|1826813_1829447_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	6.2e-92	30.7
WP_014839095.1\|1829632_1830361_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
WP_014839096.1\|1830705_1832991_+	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	3.5e-285	63.9
WP_004852757.1\|1833094_1834225_+	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	7.3e-175	78.9
WP_004104002.1\|1834224_1834479_+	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	8.2e-26	64.0
WP_014230219.1\|1834671_1836216_+\|holin	glucose-methanol-choline oxidoreductase	A0A1V0SI18	Klosneuvirus	3.0e-38	28.3

DBSCAN-SWA_8

2188320 : 2195496

Enterobacteria_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014839246.1\|2188320_2188887_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_014839247.1\|2188904_2189150_-	hypothetical protein	Q7M294	Enterobacteria_phage	2.7e-18	55.6
WP_014839248.1\|2189146_2189884_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	2.6e-72	59.8
WP_089046386.1\|2190686_2191235_+	ash family protein	Q7M2A7	Enterobacteria_phage	5.9e-29	67.6
WP_004185275.1\|2191231_2191459_+	hypothetical protein	NA	NA	NA	NA
WP_002889897.1\|2191455_2191776_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_089046387.1\|2191790_2194133_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	81.3
WP_014839253.1\|2194596_2195496_+	hypothetical protein	Q7Y4D2	Escherichia_virus	1.4e-147	86.3

DBSCAN-SWA_9

4134692 : 4204551

Klosneuvirus(10.0%)

protease,integrase,tRNA,transposase

attL 4144928:4144943|attR 4199130:4199145

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014227673.1\|4134692_4135451_+\|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	NA	NA	NA	NA
WP_014837223.1\|4135491_4136514_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004098126.1\|4136666_4137170_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004098127.1\|4137292_4140148_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	6.0e-141	36.8
WP_004098129.1\|4140147_4140591_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_014837224.1\|4140713_4142225_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	2.7e-47	38.0
WP_004098132.1\|4142618_4143716_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_014227676.1\|4143715_4144798_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_014227677.1\|4144839_4146342_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	8.8e-83	44.0
4144928:4144943	attL	NA	NA	NA	NA
WP_014837225.1\|4146428_4147250_-	TIM barrel protein	NA	NA	NA	NA
WP_014837226.1\|4147611_4149117_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_014227680.1\|4149135_4149945_+	5-deoxy-glucuronate isomerase	NA	NA	NA	NA
WP_004098142.1\|4150141_4150999_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_014837227.1\|4151150_4153064_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA
WP_014227682.1\|4153589_4155530_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA
WP_004098145.1\|4155578_4156592_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_004098146.1\|4156633_4157518_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_004098147.1\|4157543_4158443_+	myo-inosose-2 dehydratase	NA	NA	NA	NA
WP_014837229.1\|4160286_4161597_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014227685.1\|4161589_4162663_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.4e-28	33.2
WP_004117574.1\|4162668_4163493_-	phosphodiesterase	NA	NA	NA	NA
WP_014227686.1\|4163503_4164391_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_014227687.1\|4164380_4165253_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_004128305.1\|4165443_4166463_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L7I1	Tupanvirus	2.6e-46	32.3
WP_014837230.1\|4166602_4167181_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014837231.1\|4167180_4168194_-	HNH endonuclease	NA	NA	NA	NA
WP_014837232.1\|4168786_4170058_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	8.2e-82	39.3
WP_071886304.1\|4170189_4170480_+	hypothetical protein	NA	NA	NA	NA
WP_014837233.1\|4171318_4172098_+	hypothetical protein	NA	NA	NA	NA
WP_040216732.1\|4172172_4172655_+	hypothetical protein	NA	NA	NA	NA
WP_014837235.1\|4173644_4174727_+	hypothetical protein	NA	NA	NA	NA
WP_003031967.1\|4175000_4175969_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_089046404.1\|4176568_4176910_-	hypothetical protein	NA	NA	NA	NA
WP_014837237.1\|4177233_4178757_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	9.6e-45	31.4
WP_014837239.1\|4179991_4182076_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_077253178.1\|4182086_4184684_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_065810012.1\|4184872_4188487_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_014837241.1\|4188532_4192174_-	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_014837242.1\|4192185_4192788_-	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_089046459.1\|4192784_4193387_-	DUF1819 family protein	NA	NA	NA	NA
WP_001118618.1\|4194012_4194936_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	4.9e-177	99.7
WP_122117645.1\|4195289_4195577_+	hypothetical protein	NA	NA	NA	NA
WP_014837245.1\|4195976_4197194_-	M24 family metallopeptidase	NA	NA	NA	NA
WP_014837246.1\|4197280_4198234_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_074075384.1\|4198390_4199239_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
4199130:4199145	attR	NA	NA	NA	NA
WP_042933959.1\|4199262_4199934_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_074075383.1\|4199930_4200593_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_014837252.1\|4200597_4201416_+	amino acid ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.8e-13	28.0
WP_014837253.1\|4201412_4202357_+	DMT family transporter	NA	NA	NA	NA
WP_103433584.1\|4202491_4202707_+\|transposase	transposase	NA	NA	NA	NA
WP_014837254.1\|4202937_4204551_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.5e-83	37.4

DBSCAN-SWA_10

5040824 : 5106868

Salmonella_phage(20.29%)

holin,terminase,tail,integrase,tRNA

attL 5088275:5088294|attR 5111222:5111241

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089046428.1\|5040824_5042210_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.0e-45	35.1
WP_004099787.1\|5042504_5042717_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004099791.1\|5042718_5043585_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	6.5e-30	34.8
WP_157698325.1\|5044017_5044854_-\|integrase	tyrosine-type recombinase/integrase	G8C7S0	Escherichia_phage	1.5e-140	87.1
WP_004223135.1\|5045057_5045393_-	excisionase family DNA-binding protein	NA	NA	NA	NA
WP_042934012.1\|5045405_5045645_-	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	3.9e-09	43.6
WP_032419565.1\|5045644_5045863_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	3.3e-15	58.6
WP_023304908.1\|5045864_5046083_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.6e-09	47.2
WP_014837627.1\|5046079_5046847_-	hypothetical protein	D5LH17	Escherichia_phage	1.4e-65	53.2
WP_014837628.1\|5046843_5047371_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	5.5e-56	61.0
WP_071886314.1\|5047367_5047526_-	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	8.7e-10	60.0
WP_040218321.1\|5047522_5048146_-	YqaJ-like viral recombinase	S0A2A9	Cellulophaga_phage	1.3e-45	48.1
WP_020804996.1\|5048142_5048646_-	hypothetical protein	A0A0F7L7F5	uncultured_marine_virus	6.0e-12	29.5
WP_042934013.1\|5048887_5049172_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	2.3e-29	61.7
WP_014837629.1\|5049179_5050151_-	hypothetical protein	M9P0E1	Enterobacteria_phage	1.8e-65	91.0
WP_008807814.1\|5050230_5050437_-	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_038989578.1\|5051103_5051880_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_038989577.1\|5051867_5052410_-	hypothetical protein	NA	NA	NA	NA
WP_014837632.1\|5052559_5052679_-	hypothetical protein	NA	NA	NA	NA
WP_024622727.1\|5052701_5053391_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
WP_004178811.1\|5053495_5053729_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
WP_004141720.1\|5053768_5054089_+	hypothetical protein	A0A0M4RU01	Salmonella_phage	3.8e-36	68.9
WP_042934285.1\|5054223_5054952_+	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.6e-37	73.0
WP_014837634.1\|5054948_5055725_+	Origin specific replication-binding factor	A0A193GYX1	Enterobacter_phage	3.0e-95	65.4
WP_014837636.1\|5056023_5056464_+	hypothetical protein	R9TME7	Aeromonas_phage	4.9e-10	35.8
WP_042934014.1\|5056460_5056736_+	DUF4752 family protein	T1S9K2	Salmonella_phage	3.5e-30	76.2
WP_014837640.1\|5057546_5058059_+	hypothetical protein	G9L6B3	Escherichia_phage	6.2e-73	74.9
WP_014837641.1\|5058864_5059053_+	hypothetical protein	R9TNE4	Aeromonas_phage	1.0e-20	80.0
WP_014837643.1\|5059306_5059774_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	9.8e-33	46.2
WP_004243010.1\|5059754_5059922_+	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
WP_014837644.1\|5059918_5060590_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	7.3e-98	71.6
WP_042934015.1\|5060582_5061164_+	protein ninG	E7C9S3	Salmonella_phage	2.1e-40	49.8
WP_014837646.1\|5061160_5061301_+	YlcG family protein	NA	NA	NA	NA
WP_042934016.1\|5061297_5061795_+	antiterminator	G8C7V7	Escherichia_phage	1.9e-87	92.7
WP_031280382.1\|5062609_5062909_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	2.9e-46	99.0
WP_014837648.1\|5062905_5063448_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.1e-78	78.1
WP_019705419.1\|5063700_5063916_-	KTSC domain-containing protein	A0A0K1LMB5	Caulobacter_phage	2.0e-12	54.3
WP_042934018.1\|5064119_5064896_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	3.5e-11	62.3
WP_014837651.1\|5064846_5066247_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	2.3e-186	68.8
WP_042934019.1\|5066484_5067936_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	2.5e-191	68.1
WP_042934020.1\|5067991_5068540_+	phage Mu F like family protein	A0A0M4REK0	Salmonella_phage	2.6e-48	54.6
WP_014837655.1\|5068801_5070001_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	9.4e-104	54.6
WP_014837656.1\|5070012_5070507_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	64.4
WP_014837657.1\|5070518_5071460_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	5.4e-139	76.8
WP_014837658.1\|5071505_5071766_+	hypothetical protein	NA	NA	NA	NA
WP_042934022.1\|5071734_5072151_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.4e-38	60.7
WP_014837660.1\|5072150_5072651_+	hypothetical protein	NA	NA	NA	NA
WP_014837661.1\|5072650_5073037_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	2.6e-47	76.6
WP_014837662.1\|5073131_5073572_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	3.0e-39	52.4
WP_014837663.1\|5073575_5074721_+	DUF3383 family protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.9e-162	75.6
WP_004199809.1\|5074731_5075172_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_014837664.1\|5075175_5075601_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	1.5e-40	64.2
WP_004152565.1\|5075636_5075789_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_014837665.1\|5075778_5077704_+	hypothetical protein	A0A0M4REK7	Salmonella_phage	1.1e-189	73.5
WP_042934023.1\|5077703_5078294_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	5.9e-59	64.1
WP_014837667.1\|5078294_5078597_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	2.3e-27	55.0
WP_014837668.1\|5078599_5079631_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	6.6e-98	53.4
WP_014837669.1\|5079731_5079965_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	2.9e-17	51.3
WP_071886315.1\|5079970_5080336_+	hypothetical protein	NA	NA	NA	NA
WP_014837670.1\|5080383_5081040_+	hypothetical protein	A0A0M5M1K7	Salmonella_phage	1.6e-68	58.0
WP_014837671.1\|5081036_5081390_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	3.3e-49	78.6
WP_089046429.1\|5081389_5082589_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	2.9e-161	74.7
WP_042934025.1\|5082585_5083359_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	3.8e-66	50.2
WP_042934026.1\|5083358_5084144_+\|tail	tail fiber protein	A0A0K2FIZ6	Escherichia_phage	1.4e-26	44.3
WP_042934027.1\|5084143_5084722_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.1e-48	50.3
WP_009308066.1\|5087040_5087298_+	hypothetical protein	NA	NA	NA	NA
WP_042934028.1\|5087661_5087982_+	hypothetical protein	K7PGV5	Enterobacterial_phage	7.7e-21	49.0
5088275:5088294	attL	NA	NA	NA	NA
WP_042934029.1\|5088327_5089542_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.6e-125	52.8
WP_014837677.1\|5089685_5090618_+	hypothetical protein	NA	NA	NA	NA
WP_029602956.1\|5090729_5090942_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	3.2e-07	47.2
WP_042934030.1\|5090941_5091373_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	5.3e-25	48.2
WP_042934031.1\|5091386_5091989_+	antirepressor protein	A0A1W6JPH8	Morganella_phage	1.2e-51	55.3
WP_014837681.1\|5091988_5092168_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_014837682.1\|5092164_5093124_+	ash family protein	A0A291AWU3	Escherichia_phage	3.8e-07	44.3
WP_042934032.1\|5093120_5093624_+	hypothetical protein	NA	NA	NA	NA
WP_042934033.1\|5093620_5093830_+	hypothetical protein	NA	NA	NA	NA
WP_042934034.1\|5093826_5094453_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.4e-26	38.5
WP_014837686.1\|5094462_5094813_+	hypothetical protein	A0A1B5FPL8	Escherichia_phage	8.9e-39	68.2
WP_089046430.1\|5094805_5097562_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.7e-289	55.3
WP_071886316.1\|5097745_5098189_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_014837689.1\|5098209_5099187_+	helix-turn-helix domain-containing protein	F1C596	Cronobacter_phage	1.1e-83	56.7
WP_107326859.1\|5099218_5100037_-	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	3.6e-38	48.0
WP_042934035.1\|5100329_5100428_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_014837691.1\|5100956_5101283_+	hypothetical protein	M1PRT9	Cellulophaga_phage	1.8e-33	77.7
WP_014837692.1\|5101416_5101602_+	hypothetical protein	NA	NA	NA	NA
WP_014837693.1\|5102067_5103207_+	hypothetical protein	NA	NA	NA	NA
WP_004213174.1\|5103543_5103870_+	hypothetical protein	NA	NA	NA	NA
WP_014837694.1\|5103877_5106868_+\|tail	phage tail length tape-measure protein 1	F1C5E9	Cronobacter_phage	1.1e-73	33.3
5111222:5111241	attR	NA	NA	NA	NA

DBSCAN-SWA_11

5588154 : 5627708

Klebsiella_phage(20.0%)

integrase,terminase,transposase,holin

attL 5590473:5590488|attR 5631599:5631614

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064404689.1\|5588154_5588379_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	6.8e-16	58.1
WP_123828190.1\|5588421_5588655_-	hypothetical protein	NA	NA	NA	NA
WP_025108072.1\|5588720_5589014_-	hypothetical protein	NA	NA	NA	NA
WP_025108070.1\|5589604_5590009_-	helix-turn-helix domain-containing protein	B1B6L9	Salmonella_phage	1.2e-13	54.9
WP_009653783.1\|5590088_5590316_+	transcriptional regulator	K7PHK4	Enterobacteria_phage	1.4e-08	44.3
WP_009653775.1\|5590299_5590725_+	Rha family transcriptional regulator	NA	NA	NA	NA
5590473:5590488	attL	NA	NA	NA	NA
WP_071886321.1\|5590738_5590993_+	hypothetical protein	NA	NA	NA	NA
WP_009653780.1\|5590989_5592066_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	4.7e-30	42.6
WP_014837897.1\|5592078_5592336_+	hypothetical protein	NA	NA	NA	NA
WP_029946971.1\|5592395_5592614_+	hypothetical protein	NA	NA	NA	NA
WP_004111726.1\|5593051_5593345_+	hypothetical protein	NA	NA	NA	NA
WP_014837900.1\|5594124_5594307_+	hypothetical protein	NA	NA	NA	NA
WP_025108065.1\|5594473_5595067_+	hypothetical protein	A0A0M4RU10	Salmonella_phage	3.9e-42	48.5
WP_014837902.1\|5595063_5595960_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.7e-127	73.4
WP_014837903.1\|5595952_5597935_+	DNA methyltransferase	H9C171	Pectobacterium_phage	2.8e-193	51.9
WP_089046440.1\|5597931_5598072_+	YlcG family protein	NA	NA	NA	NA
WP_025108063.1\|5598068_5598677_+	hypothetical protein	H9C175	Pectobacterium_phage	1.5e-70	60.2
WP_031280382.1\|5599389_5599689_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	2.9e-46	99.0
WP_004849279.1\|5599685_5600228_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	2.0e-77	76.4
WP_014837905.1\|5600224_5600569_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.5e-43	82.5
WP_014837906.1\|5600565_5600841_+	hypothetical protein	G8C7W1	Escherichia_phage	3.0e-05	35.6
WP_014837907.1\|5601076_5601361_-	hypothetical protein	NA	NA	NA	NA
WP_014837908.1\|5601499_5601793_+	hypothetical protein	G8C7W3	Escherichia_phage	4.0e-32	73.2
WP_014228564.1\|5601917_5602103_+	hypothetical protein	NA	NA	NA	NA
WP_014837909.1\|5602253_5602454_+	hypothetical protein	A0A1L6Z528	Klebsiella_phage	1.0e-18	73.3
WP_042934307.1\|5602520_5602892_+	hypothetical protein	Q76H27	Enterobacteria_phage	2.4e-50	76.3
WP_014837910.1\|5602895_5603867_+\|terminase	terminase small subunit	Q6J1S5	Burkholderia_virus	5.6e-30	38.5
WP_014837911.1\|5603868_5605461_+\|terminase	phage terminase	Q775B9	Bordetella_phage	8.7e-97	40.4
WP_014837912.1\|5605461_5605683_+	hypothetical protein	NA	NA	NA	NA
WP_014837913.1\|5605724_5607296_+	hypothetical protein	A0A1B1ITN4	uncultured_Mediterranean_phage	5.6e-56	29.7
WP_014837914.1\|5607292_5607586_+	hypothetical protein	NA	NA	NA	NA
WP_014837915.1\|5607621_5608587_+	hypothetical protein	NA	NA	NA	NA
WP_014837916.1\|5608724_5609576_+	hypothetical protein	NA	NA	NA	NA
WP_014837917.1\|5609586_5609853_+	hypothetical protein	NA	NA	NA	NA
WP_014837918.1\|5609901_5610327_+	hypothetical protein	NA	NA	NA	NA
WP_042934047.1\|5610326_5610953_+	hypothetical protein	NA	NA	NA	NA
WP_014837920.1\|5610961_5613646_+	hypothetical protein	A0A2I7RHD1	Vibrio_phage	7.4e-24	26.5
WP_049824817.1\|5613635_5614079_+	hypothetical protein	NA	NA	NA	NA
WP_049824818.1\|5614053_5614869_+	hypothetical protein	NA	NA	NA	NA
WP_042934310.1\|5615403_5617488_+	lytic transglycosylase domain-containing protein	T1SBJ1	Salmonella_phage	1.6e-106	48.1
WP_014837924.1\|5617484_5619293_+	hypothetical protein	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	2.2e-237	70.9
WP_001067858.1\|5619980_5620685_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000845048.1\|5620759_5621773_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001389366.1\|5621930_5622404_+	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IBQ4	Erwinia_phage	7.6e-17	33.1
WP_000503573.1\|5622534_5623323_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
WP_000679427.1\|5623528_5623876_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|5623869_5624709_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376616.1\|5624836_5625040_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|5625195_5626401_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|5626411_5626717_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|5626943_5627708_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
5631599:5631614	attR	NA	NA	NA	NA

DBSCAN-SWA_12

5642748 : 5649421

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|5642748_5643453_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001387387.1\|5643499_5643901_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000027057.1\|5644050_5644911_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067855.1\|5645495_5646200_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_042934048.1\|5646555_5646972_+	hypothetical protein	K7P834	Enterobacteria_phage	1.2e-26	48.4
WP_038423245.1\|5647431_5648634_+	serine-type D-Ala-D-Ala carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.7e-95	46.7
WP_004849345.1\|5648662_5649421_-	DNA-binding transcriptional repressor DeoR	A0A077SK06	Escherichia_phage	2.0e-11	27.2

DBSCAN-SWA_13

6076803 : 6121055

Salmonella_phage(15.56%)

capsid,portal,protease,holin,terminase,head,tail,integrase,tRNA

attL 6069556:6069571|attR 6083515:6083530

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6069556:6069571	attL	NA	NA	NA	NA
WP_004849976.1\|6076803_6077910_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_014838108.1\|6077948_6078425_-	NUDIX hydrolase	NA	NA	NA	NA
WP_014838109.1\|6078434_6079097_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_014228876.1\|6079333_6080584_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_008806033.1\|6080696_6081839_-\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	1.2e-172	81.9
WP_008806034.1\|6081828_6082065_-	excisionase	NA	NA	NA	NA
WP_040235764.1\|6082365_6082602_-	hypothetical protein	G8C7S3	Escherichia_phage	2.9e-09	53.4
WP_014838111.1\|6082594_6083146_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	7.0e-30	46.0
WP_042934056.1\|6083142_6083370_-	hypothetical protein	NA	NA	NA	NA
WP_042934057.1\|6083797_6084142_-	hypothetical protein	NA	NA	NA	NA
6083515:6083530	attR	NA	NA	NA	NA
WP_014838115.1\|6084269_6085055_-	hypothetical protein	C7BGF1	Burkholderia_phage	4.5e-62	51.8
WP_023343167.1\|6085047_6085248_-	hypothetical protein	NA	NA	NA	NA
WP_042934058.1\|6085247_6085775_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	9.3e-64	70.9
WP_014838117.1\|6085910_6086741_-	YfdQ family protein	Q8HAA2	Salmonella_phage	9.3e-127	82.4
WP_014838118.1\|6086793_6087165_-	hypothetical protein	Q8HAA1	Salmonella_phage	4.8e-51	80.5
WP_087855718.1\|6087981_6088497_+	hypothetical protein	NA	NA	NA	NA
WP_038808210.1\|6088769_6089402_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	6.0e-33	43.0
WP_025714631.1\|6089499_6089730_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	2.7e-12	51.6
WP_014838120.1\|6089963_6090431_-	hypothetical protein	NA	NA	NA	NA
WP_014838121.1\|6090511_6091060_+	hypothetical protein	A0A1C9II13	Salmonella_phage	3.0e-65	66.9
WP_023322342.1\|6091232_6091412_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.6e-13	67.3
WP_014838122.1\|6091401_6092313_+	GntR family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	9.8e-53	75.2
WP_038808205.1\|6092309_6092768_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_014838123.1\|6092755_6094138_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.5e-105	48.4
WP_042934060.1\|6094130_6096113_+	DNA methyltransferase	H9C171	Pectobacterium_phage	4.4e-199	53.1
WP_014838125.1\|6096109_6096586_+\|protease	SOS-response repressor and protease LexA	NA	NA	NA	NA
WP_042934062.1\|6096582_6096981_+	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	1.2e-44	70.6
WP_049824822.1\|6097070_6097892_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	1.8e-90	65.8
WP_014838127.1\|6097973_6098960_+	DUF968 domain-containing protein	Q8SBE5	Shigella_phage	1.5e-91	48.9
WP_042934063.1\|6098978_6099809_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.7e-59	47.2
WP_023343183.1\|6100018_6100210_+	hypothetical protein	Q8SBE3	Shigella_phage	2.1e-21	81.0
WP_014838128.1\|6100359_6101412_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.8e-168	76.9
WP_130951362.1\|6101833_6102412_+	SocA family protein	A0A088CD78	Shigella_phage	6.3e-05	62.5
WP_014838130.1\|6103065_6103215_+	hypothetical protein	NA	NA	NA	NA
WP_042934064.1\|6103475_6103865_+	membrane protein	K7PHB9	Enterobacterial_phage	1.2e-47	78.1
WP_042934065.1\|6103854_6104133_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.4e-34	77.8
WP_014838132.1\|6104222_6104762_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.6e-101	98.9
WP_042934066.1\|6104758_6105106_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.0e-39	80.0
WP_014838134.1\|6105102_6105378_+	hypothetical protein	NA	NA	NA	NA
WP_014838135.1\|6105927_6106173_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	2.3e-17	64.2
WP_014838136.1\|6106496_6106838_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	1.3e-47	73.9
WP_014838137.1\|6106955_6107420_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	6.3e-48	62.1
WP_077253184.1\|6107373_6109110_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	1.1e-137	44.9
WP_042934068.1\|6109116_6110436_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	1.2e-139	59.3
WP_014838140.1\|6110411_6111119_+\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	6.4e-68	63.0
WP_014838141.1\|6111128_6112349_+\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	1.2e-141	64.8
WP_014838142.1\|6112394_6112649_+	hypothetical protein	NA	NA	NA	NA
WP_032734570.1\|6112654_6112987_+\|head,tail	phage gp6-like head-tail connector protein	Q6JIM5	Burkholderia_virus	8.8e-12	31.6
WP_042934069.1\|6112999_6113338_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	2.1e-37	66.1
WP_014838144.1\|6113334_6113784_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	5.1e-63	81.9
WP_014838145.1\|6113780_6114128_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	1.5e-30	58.4
WP_014838146.1\|6114184_6114895_+\|tail	tail protein	K7PHL2	Enterobacterial_phage	9.9e-85	69.5
WP_014838147.1\|6114925_6115330_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	2.1e-31	55.0
WP_042934070.1\|6115332_6115638_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	2.8e-28	65.0
WP_071886327.1\|6115692_6116034_+	hypothetical protein	Q5G8W9	Enterobacteria_phage	5.7e-06	46.8
WP_014838149.1\|6116093_6119699_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	4.7e-207	55.4
WP_042934071.1\|6119719_6120193_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.2e-55	63.2
WP_014838151.1\|6120179_6120665_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	2.3e-53	66.2
WP_042934072.1\|6120674_6121055_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.2e-57	81.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP022348.1|WP_023304908.1|5045864_5046083_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP022348.1|WP_014837686.1|5094462_5094813_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP022348.1|WP_023304908.1|5045864_5046083_-|hypothetical-protein

5045864_5046083_-

72 aa aa

5040824-5106868

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP022348_1	TypeI-E	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	5057097-5057066	2

1. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022348 position: 5057097-5057066, mismatch: 2

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcatca	Protospacer
************************** ** **

NZ_CP022348.1|WP_014837686.1|5094462_5094813_+|hypothetical-protein

5094462_5094813_+

116 aa aa

5040824-5106868

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP022348_1	TypeI-E	1.7\|2377663\|32\|NZ_CP022348\|CRT,PILER-CR,CRISPRCasFinder	2377663-2377694	32	5057097-5057066	2

1. spacer 1.7|2377663|32|NZ_CP022348|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022348 position: 5057097-5057066, mismatch: 2

gcgccttctccagcgcctctaccagctcagca	CRISPR spacer
gcgccttctccagcgcctctaccagcgcatca	Protospacer
************************** ** **

3. NZ_CP022350

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

24884 : 81059

Escherichia_phage(15.0%)

transposase,integrase

attL 54079:54100|attR 58897:58918

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019445.1\|24884_25865_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_089046470.1\|25907_26804_+	hypothetical protein	NA	NA	NA	NA
WP_032072920.1\|27956_28616_-	endonuclease III	NA	NA	NA	NA
WP_001183923.1\|30165_30465_+	DUF2293 domain-containing protein	NA	NA	NA	NA
WP_000376617.1\|30548_30791_-	hypothetical protein	NA	NA	NA	NA
WP_032072921.1\|30918_31758_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	2.9e-11	27.5
WP_015460530.1\|32136_33102_-	TniQ family protein	NA	NA	NA	NA
WP_015460531.1\|33103_34036_-	AAA family ATPase	NA	NA	NA	NA
WP_016479967.1\|34032_34719_-	hypothetical protein	NA	NA	NA	NA
WP_032072922.1\|34752_35514_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003149906.1\|36256_37786_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000855769.1\|38082_38928_+	RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_004201164.1\|39485_40298_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|40301_40667_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|40671_41310_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|41320_42352_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004201171.1\|42356_42686_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201172.1\|42879_43170_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201176.1\|43225_44866_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_087728544.1\|46516_47533_-\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.4e-187	100.0
WP_016479963.1\|47664_48195_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_022652312.1\|48198_48468_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_022652311.1\|49323_50313_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	5.0e-103	61.2
WP_089046468.1\|52053_53173_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.0e-51	42.8
54079:54100	attL	NA	NA	NA	NA
WP_016479957.1\|54110_55433_+	GntP family transporter	NA	NA	NA	NA
WP_008322208.1\|55631_56423_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.4e-50	88.4
WP_008322211.1\|56412_56727_-	hypothetical protein	NA	NA	NA	NA
WP_008322213.1\|56728_57034_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_032934863.1\|57035_57254_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_016479955.1\|59025_61608_+	EAL domain-containing protein	G3MA91	Bacillus_virus	1.6e-23	36.2
58897:58918	attR	NA	NA	NA	NA
WP_001067855.1\|61641_62346_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_016479953.1\|64364_65609_-	capsular biosynthesis protein	NA	NA	NA	NA
WP_016479952.1\|65698_67702_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_001118645.1\|68745_69669_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.0e-166	93.2
WP_016479950.1\|69774_70407_-	LacI family DNA-binding transcriptional regulator	M9Q1K0	Clostridium_phage	1.6e-06	29.7
WP_015493083.1\|70769_71975_+	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
WP_016479949.1\|71971_72943_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
WP_015493081.1\|73078_74350_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	6.1e-154	63.0
WP_015493080.1\|74349_74772_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
WP_000343760.1\|74831_76052_-\|transposase	ISL3-like element ISKox3 family transposase	NA	NA	NA	NA
WP_015493079.1\|76275_76947_-	Gifsy-2 prophage protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
WP_002211749.1\|77305_77983_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
WP_015493077.1\|77982_78204_+	hypothetical protein	NA	NA	NA	NA
WP_016479994.1\|78214_78634_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_015493075.1\|78687_79467_+	hypothetical protein	NA	NA	NA	NA
WP_015493074.1\|79871_80378_+	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
WP_015493073.1\|80420_80612_+	hypothetical protein	NA	NA	NA	NA
WP_032072906.1\|80798_81059_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022349

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP022348

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

3. NZ_CP022350

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection