CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP022140	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP022139	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K chromosome, complete genome	2 crisprs	PD-DExK,WYL,csa3,cas3,cas1,DEDDh,DinG	13	38	8	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17666 : 67280

uncultured_virus(23.08%)

transposase,bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080226157.1\|17666_17927_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_080226156.1\|17929_19678_-	colicin	NA	NA	NA	NA
WP_080226155.1\|20061_20544_-	hypothetical protein	NA	NA	NA	NA
WP_088744861.1\|22820_23426_-	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	1.8e-18	34.2
WP_088744863.1\|23520_26418_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.0e-180	37.5
WP_080227279.1\|27740_28586_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_080227289.1\|30270_30486_-	hypothetical protein	NA	NA	NA	NA
WP_080227280.1\|30777_31605_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_080227281.1\|31668_35259_-	hypothetical protein	NA	NA	NA	NA
WP_080227283.1\|36506_36704_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_080227284.1\|37138_37324_+	hypothetical protein	NA	NA	NA	NA
WP_088744865.1\|37527_38736_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.6e-50	50.8
WP_080227287.1\|39696_39966_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_080227286.1\|39969_40500_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_088744867.1\|40598_41807_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.9e-50	50.8
WP_088744869.1\|41881_43212_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	3.6e-72	69.3
WP_088744871.1\|43342_44597_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.4e-27	31.6
WP_080227760.1\|44939_45950_-	replication initiation protein	J9Q7H0	Salmonella_phage	2.6e-86	56.3
WP_023994210.1\|46695_47862_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.2e-220	96.4
WP_080227759.1\|47861_48821_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	9.1e-134	76.9
WP_023994162.1\|49621_50104_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001195098.1\|50094_50379_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_080227067.1\|50499_50754_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_080227076.1\|56348_56459_+\|transposase	transposase	A0A077SLN2	Escherichia_phage	5.1e-09	74.3
WP_080227069.1\|57674_58877_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.2e-76	71.0
WP_080227070.1\|60180_60384_+	hypothetical protein	NA	NA	NA	NA
WP_080227071.1\|60425_60677_-	hypothetical protein	A0A248SLB9	Klebsiella_phage	2.1e-05	49.1
WP_080227072.1\|62329_62662_+	nikA protein	NA	NA	NA	NA
WP_080227073.1\|62671_65371_+	IncI1-type relaxase NikB	NA	NA	NA	NA
WP_080227074.1\|65587_65776_-	hypothetical protein	NA	NA	NA	NA
WP_088744873.1\|66351_66639_+	transcriptional regulator	NA	NA	NA	NA
WP_080227077.1\|66911_67280_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	2.2e-11	44.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP022139

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022139_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022139_1

1045037-1047079

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGTCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CRT

33 spacers

The CRISPR arrays of NZ_CP022139_1

>merge|NZ_CP022139|1|1045037-1047079|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGTCAGCGGGGATAAACCGAAAAACCTGCGACCACGGAATATCCAAATTTCGTGTTCCCCGCGTCAGCGGGGATAAACCGAATTAGAAATGATCGATGTAGCCAGGAACGGAGTGTTCCCCGCGTCAGCGGGGATAAACCGCAGGCCTAACTCAACGGCCCGGGCGAAATTTTGTGTTCCCCGCGTCAGCGGGGATAAACCGCCTTCATGTTCGATGATAACTGTTTTATTACTGTGTTCCCCGCGTCAGCGGGGATAAACCTCAGGTACTCTATCCTGATAATGTTCTTCAGCCGTGTTCCCCGCGTCAGCGGGGATAAACCGGAATTACGAGAGAGAAATGAAAACTTTAGTTAGTGTTCCCCGCGTCAGCGGGGATAAACCGTTAACTGCGTCAATATCGGTGATGATAACTCTGTGTTCCCCGCGTCAGCGGGGATAAACCGCGGTCGATGTCGCGTCGTCCCCGTACACCGCCGTGTTCCCCGCGTCAGCGGGGATAAACCCAGTGCCGGGCCAACTGGCAGGGATATCAAATAGTGTTCCCCGCGTCAGCGGGGATAAACCGGGCGACGGCGTAGAGCTTGCCTTGGGTACGCCGTGTTCCCCGCGTCAGCGGGGATAAACCGCAAAACCACCACGTGAAACAACCTTGTCCTGAGTGTTCCCCGCGTCAGCGGGGATAAACCGGGACTAAATCGCAGATACTGCTGTCCAGAGCAGTGTTCCCCGCGTCAGCGGGGATAAACCGACACTCCCATTTGAAGAACAGCGCCATATGACGTGTTCCCCGCGTCAGCGGGGATAAACCGTTCCCGCTGTTTATATCCGGTGTATTGCAGGAGTGTTCCCCGCGTCAGCGGGGATAAACCGACACTCCCATTTGAAGAACAGCGCCATATGACGTGTTCCCCGCGTCAGCGGGGATAAACCGCTAAACATCGTTATAAGCTAAAACCTCCCCGTGTGTTCCCCGCGTCAGCGGGGATAAACCGAATTTTCAGCAGAAAAACGTATATGAAATCTACGTGTTCCCCGCGTCAGCGGGGATAAACCGGTGTTTAGGGAGGTTAGGGATTCTCTTGGAATGTGTTCCCCGCGTCAGCGGGGATAAACCGGGAACCGTCCTCGGGGAGATGTTCGTTATCGTGTGTTCCCCGCGTCAGCGGGGATAAACCGACCTATACCGCCAGCGAACTGGCTATTGGGCTGTGTTCCCCGCGTCAGCGGGGATAAACCGCGGTAACGCAAATTCTTGGTTCGACCTTGTACGTGTTCCCCGCGTCAGCGGGGATAAACCGAAAAACTGACGTGGTTTGAACGCAGGGTGCTGGTGTTCCCCGCGTCAGCGGGGATAAACCAGTCATTCCCGTTTCTGGAAATCGTGGGGGAACGTGTTCCCCGCGTCAGCGGGGATAAACCGTGATTCGCCGTAGTATGTTAGCCTCAACGTAAGTGTTCCCCGCGTCAGCGGGGATAAACCGTTTTCGCGCCGTCCTGAATTGAAATGGAAACAGTGTTCCCCGCGTCAGCGGGGATAAACCGATGCGCCTGTCTTTTTTCCACTTCAGGCTCGGGTGTTCCCCGCGTCAGCGGGGATAAACCGAAAACATATAGAAATGAGCGTTTCATGCATTAGTGTTCCCCGCGTCAGCGGGGATAAACCGTTTACCCGCCGCGAGGTTCTCTTTGGTATTGAGTGTTCCCCGCGTCAGCGGGGATAAACCGTTGACCGGACGCGCGGTTATTCAACTAACCGTGTGTTCCCCGCGTCAGCGGGGATAAACCGTGTCCGATTATTTTATCGCTATTTGTGAAACTGTGTTCCCCGCGTCAGCGGGGATAAACCGGCATCAGCGGTCATGACTACAGGTTCAGTCCTGTGTTCCCCGCATCAGCGGGGATAAACCGACAGGGGGAACCGGGAGCCTCCGCAAGCTTGAGTGTTCCCCGCGTCAGCGGGGATAAACCCCACGAAGGGTCCGGTTGTTTTTGGATGCCCCCGTGTTCCCCGCGTCAGCGGGGATAGCCGT

>NZ_CP022139|1|1|1045037-1047017|PILER-CR
GTGTTCCCCGCGTCAGCGGGGATAAACC	GAAAAACCTGCGACCACGGAATATCCAAATTTC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GAATTAGAAATGATCGATGTAGCCAGGAACGGA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GCAGGCCTAACTCAACGGCCCGGGCGAAATTTT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GCCTTCATGTTCGATGATAACTGTTTTATTACT
GTGTTCCCCGCGTCAGCGGGGATAAACC	TCAGGTACTCTATCCTGATAATGTTCTTCAGCC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GGAATTACGAGAGAGAAATGAAAACTTTAGTTA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTTAACTGCGTCAATATCGGTGATGATAACTCT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GCGGTCGATGTCGCGTCGTCCCCGTACACCGCC
GTGTTCCCCGCGTCAGCGGGGATAAACC	CAGTGCCGGGCCAACTGGCAGGGATATCAAATA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GGGCGACGGCGTAGAGCTTGCCTTGGGTACGCC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GCAAAACCACCACGTGAAACAACCTTGTCCTGA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GGGACTAAATCGCAGATACTGCTGTCCAGAGCA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GACACTCCCATTTGAAGAACAGCGCCATATGAC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTTCCCGCTGTTTATATCCGGTGTATTGCAGGA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GACACTCCCATTTGAAGAACAGCGCCATATGAC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GCTAAACATCGTTATAAGCTAAAACCTCCCCGT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GAATTTTCAGCAGAAAAACGTATATGAAATCTAC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GGTGTTTAGGGAGGTTAGGGATTCTCTTGGAAT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GGGAACCGTCCTCGGGGAGATGTTCGTTATCGT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GACCTATACCGCCAGCGAACTGGCTATTGGGCT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GCGGTAACGCAAATTCTTGGTTCGACCTTGTAC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GAAAAACTGACGTGGTTTGAACGCAGGGTGCTG
GTGTTCCCCGCGTCAGCGGGGATAAACC	AGTCATTCCCGTTTCTGGAAATCGTGGGGGAAC
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTGATTCGCCGTAGTATGTTAGCCTCAACGTAA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTTTTCGCGCCGTCCTGAATTGAAATGGAAACA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GATGCGCCTGTCTTTTTTCCACTTCAGGCTCGG
GTGTTCCCCGCGTCAGCGGGGATAAACC	GAAAACATATAGAAATGAGCGTTTCATGCATTA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTTTACCCGCCGCGAGGTTCTCTTTGGTATTGA
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTTGACCGGACGCGCGGTTATTCAACTAACCGT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GTGTCCGATTATTTTATCGCTATTTGTGAAACT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GGCATCAGCGGTCATGACTACAGGTTCAGTCCT
GTGTTCCCCGCATCAGCGGGGATAAACC	GACAGGGGGAACCGGGAGCCTCCGCAAGCTTGA
GTGTTCCCCGCGTCAGCGGGGATAAACC

>NZ_CP022139|1|1|1045037-1047079|CRISPRCasFinder
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AAAAACCTGCGACCACGGAATATCCAAATTTC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AATTAGAAATGATCGATGTAGCCAGGAACGGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAGGCCTAACTCAACGGCCCGGGCGAAATTTT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CCTTCATGTTCGATGATAACTGTTTTATTACT
GTGTTCCCCGCGTCAGCGGGGATAAACCT	CAGGTACTCTATCCTGATAATGTTCTTCAGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GAATTACGAGAGAGAAATGAAAACTTTAGTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTAACTGCGTCAATATCGGTGATGATAACTCT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CGGTCGATGTCGCGTCGTCCCCGTACACCGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCC	AGTGCCGGGCCAACTGGCAGGGATATCAAATA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGACGGCGTAGAGCTTGCCTTGGGTACGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAACCACCACGTGAAACAACCTTGTCCTGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGACTAAATCGCAGATACTGCTGTCCAGAGCA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACACTCCCATTTGAAGAACAGCGCCATATGAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTCCCGCTGTTTATATCCGGTGTATTGCAGGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACACTCCCATTTGAAGAACAGCGCCATATGAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTAAACATCGTTATAAGCTAAAACCTCCCCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AATTTTCAGCAGAAAAACGTATATGAAATCTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GTGTTTAGGGAGGTTAGGGATTCTCTTGGAAT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGAACCGTCCTCGGGGAGATGTTCGTTATCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACCTATACCGCCAGCGAACTGGCTATTGGGCT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CGGTAACGCAAATTCTTGGTTCGACCTTGTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AAAAACTGACGTGGTTTGAACGCAGGGTGCTG
GTGTTCCCCGCGTCAGCGGGGATAAACCA	GTCATTCCCGTTTCTGGAAATCGTGGGGGAAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TGATTCGCCGTAGTATGTTAGCCTCAACGTAA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTTTCGCGCCGTCCTGAATTGAAATGGAAACA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATGCGCCTGTCTTTTTTCCACTTCAGGCTCGG
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AAAACATATAGAAATGAGCGTTTCATGCATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTTACCCGCCGCGAGGTTCTCTTTGGTATTGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGACCGGACGCGCGGTTATTCAACTAACCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TGTCCGATTATTTTATCGCTATTTGTGAAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCATCAGCGGTCATGACTACAGGTTCAGTCCT
GTGTTCCCCGCATCAGCGGGGATAAACCG	ACAGGGGGAACCGGGAGCCTCCGCAAGCTTGA
GTGTTCCCCGCGTCAGCGGGGATAAACCC	CACGAAGGGTCCGGTTGTTTTTGGATGCCCCC
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

>NZ_CP022139|1|1|1045037-1047079|CRT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AAAAACCTGCGACCACGGAATATCCAAATTTC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AATTAGAAATGATCGATGTAGCCAGGAACGGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAGGCCTAACTCAACGGCCCGGGCGAAATTTT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CCTTCATGTTCGATGATAACTGTTTTATTACT
GTGTTCCCCGCGTCAGCGGGGATAAACCT	CAGGTACTCTATCCTGATAATGTTCTTCAGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GAATTACGAGAGAGAAATGAAAACTTTAGTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTAACTGCGTCAATATCGGTGATGATAACTCT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CGGTCGATGTCGCGTCGTCCCCGTACACCGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCC	AGTGCCGGGCCAACTGGCAGGGATATCAAATA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGACGGCGTAGAGCTTGCCTTGGGTACGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CAAAACCACCACGTGAAACAACCTTGTCCTGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGACTAAATCGCAGATACTGCTGTCCAGAGCA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACACTCCCATTTGAAGAACAGCGCCATATGAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTCCCGCTGTTTATATCCGGTGTATTGCAGGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACACTCCCATTTGAAGAACAGCGCCATATGAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTAAACATCGTTATAAGCTAAAACCTCCCCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AATTTTCAGCAGAAAAACGTATATGAAATCTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GTGTTTAGGGAGGTTAGGGATTCTCTTGGAAT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGAACCGTCCTCGGGGAGATGTTCGTTATCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ACCTATACCGCCAGCGAACTGGCTATTGGGCT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CGGTAACGCAAATTCTTGGTTCGACCTTGTAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AAAAACTGACGTGGTTTGAACGCAGGGTGCTG
GTGTTCCCCGCGTCAGCGGGGATAAACCA	GTCATTCCCGTTTCTGGAAATCGTGGGGGAAC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TGATTCGCCGTAGTATGTTAGCCTCAACGTAA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTTTCGCGCCGTCCTGAATTGAAATGGAAACA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATGCGCCTGTCTTTTTTCCACTTCAGGCTCGG
GTGTTCCCCGCGTCAGCGGGGATAAACCG	AAAACATATAGAAATGAGCGTTTCATGCATTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTTACCCGCCGCGAGGTTCTCTTTGGTATTGA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TTGACCGGACGCGCGGTTATTCAACTAACCGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TGTCCGATTATTTTATCGCTATTTGTGAAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCATCAGCGGTCATGACTACAGGTTCAGTCCT
GTGTTCCCCGCATCAGCGGGGATAAACCG	ACAGGGGGAACCGGGAGCCTCCGCAAGCTTGA
GTGTTCCCCGCGTCAGCGGGGATAAACCC	CACGAAGGGTCCGGTTGTTTTTGGATGCCCCC
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022139.1\|WP_079809415.1\|1057015_1057924_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP022139.1\|WP_080226278.1\|1028568_1028820_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271182
NZ_CP022139.1\|WP_080226269.1\|1037585_1039820_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP022139.1\|WP_080226266.1\|1044068_1044740_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP022139.1\|WP_000108313.1\|1048062_1048425_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP022139.1\|WP_080226963.1\|1053360_1054311_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP022139.1\|WP_080227866.1\|1050528_1052241_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP022139.1\|WP_088744617.1\|1052349_1053084_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP022139.1\|WP_080226270.1\|1036238_1037534_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP022139.1\|WP_080227865.1\|1048729_1050529_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP022139.1\|WP_080226275.1\|1031401_1031812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022139.1\|WP_141030836.1\|1054706_1055075_-\|CRISPR-associated-protein-Cas3	unknown	unknown	unknown
NZ_CP022139.1\|WP_080226267.1\|1042633_1043932_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP022139.1\|WP_088744615.1\|1033424_1036181_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP022139.1\|WP_000210863.1\|1040913_1042551_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP022139.1\|WP_080226276.1\|1029963_1031421_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|269829
NZ_CP022139.1\|WP_088744616.1\|1047175_1047973_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP022139.1\|WP_080226965.1\|1057933_1059373_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP022139.1\|WP_080226964.1\|1055717_1056764_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP022139.1\|WP_080226268.1\|1039894_1040686_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569

Protein	Function_ID	Function_description	E-value
NZ_CP022139.1\|WP_079809415.1\|1057015_1057924_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP022139.1\|WP_080226278.1\|1028568_1028820_+\|hypothetical-protein	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.78954e-07
NZ_CP022139.1\|WP_080226269.1\|1037585_1039820_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP022139.1\|WP_080226266.1\|1044068_1044740_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.57918e-153
NZ_CP022139.1\|WP_000108313.1\|1048062_1048425_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP022139.1\|WP_080226963.1\|1053360_1054311_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	1.30424e-175
NZ_CP022139.1\|WP_080227866.1\|1050528_1052241_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP022139.1\|WP_088744617.1\|1052349_1053084_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.63211e-137
NZ_CP022139.1\|WP_080226270.1\|1036238_1037534_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP022139.1\|WP_080227865.1\|1048729_1050529_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP022139.1\|WP_080226267.1\|1042633_1043932_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP022139.1\|WP_088744615.1\|1033424_1036181_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP022139.1\|WP_000210863.1\|1040913_1042551_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP022139.1\|WP_080226276.1\|1029963_1031421_+\|hypothetical-protein	gnl\|CDD\|269829	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family of mostly beta- and gamma-proteobacteria, and forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). Most members contain C-terminal domain extensions corresponding to several uncharacterized domains such as S-type pyocin, DUF2235, DUF2345 and cytotoxic proteins. However, these terminal domains are exposed to solution, and do not distort the binding site of VgrG. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes.	3.19705e-20
NZ_CP022139.1\|WP_088744616.1\|1047175_1047973_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.1528e-97
NZ_CP022139.1\|WP_080226965.1\|1057933_1059373_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP022139.1\|WP_080226964.1\|1055717_1056764_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP022139.1\|WP_080226268.1\|1039894_1040686_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.17039e-158

>NZ_CP022139.1|WP_080226266.1|1044068_1044740_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLYSILAKTKESDKWGAASSEDLLAVINRQSYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKTRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP022139.1|WP_080226267.1|1042633_1043932_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGRKEIKGQA
>NZ_CP022139.1|WP_000210863.1|1040913_1042551_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP022139.1|WP_080226268.1|1039894_1040686_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLNIMQRLRDPEGGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP022139.1|WP_080226269.1|1037585_1039820_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGHLRAEMKNEGVMAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELTHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGN
>NZ_CP022139.1|WP_080226270.1|1036238_1037534_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDPFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPILAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHDLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP022139.1|WP_088744615.1|1033424_1036181_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESLGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESVIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLGGKRLAYVEPNATAAQCTLDLLSDMPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHAEPLLMDASKIAMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANIAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVARETKKILG
>NZ_CP022139.1|WP_080226275.1|1031401_1031812_+|hypothetical-protein
MKTLLNNHPNLPIYLGMIYMIAFILILIISFINTFCYKKIVKLYTDKYGSLPITASMAKYSSLIATPGAYHAKIGFIMDSLILPYNRFSNHDMTKEQYEYINKLPIKLTIWFRIEGVLWIISIPTLAMTFIMFGMN
>NZ_CP022139.1|WP_080226276.1|1029963_1031421_+|hypothetical-protein
MGRAYFLVVGDKTTCGGSIVSGCTNHTIHGQSTACEGDQYICGSDKQLHQIVGGQPDYFIHGRRAAGTAHSVGTCSCRCRFINSHFDVTYGYESKIVSAPKPVTRIAPVAPQNAPKPLTMAPGPSCPVEADEPSREPVDAGFCVLPYGATPSSYESWFFINPPDGARELYHKLNPDMKKQPGSILIVVDPEKQDQQQIETLQKARDRIDKALAPLSLEEAKLLHDNRAVVDTFSYQLYGDYLGKAGDGFGYISEIGKGYYEEISSILKEIETLYRKTYIHNNGIISGEEFFGQRSSLFKRLDTVLNKFSKSQLNLKEYNSIKKALGLSTSSIMHKWDKAGVDNIEGYANYIENSAKLIKVMKNVGYIGVGLDFAGYSANVYDACSKGREDACKKAAIAEYTKFGFKQGASMGVGWATGLAARGACMWVLGLATAEVGGLGSGLCFVTGLGVSIGAAKFSESYGENIGNTIGTYVGEHIIYENTIK
>NZ_CP022139.1|WP_080226278.1|1028568_1028820_+|hypothetical-protein
MYDADNNKLTIAKEFTKLNRNNVISICASAKRILEEQTKRYPDSDFYFPGRNYEKQQKVYNAKVKAAPLKRALKPTMGFGLNQ
>NZ_CP022139.1|WP_088744616.1|1047175_1047973_+|MBL-fold-metallo-hydrolase
MALTIRVLLENHKGPGADKSLRAKPGLSLLVQDESTSILFDTGPDGSFIQNALTMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMVYTRDPRPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPFTLWRVRRFLHEQKPEKLCGCHCTGAWGRLWLPEIIAPATGDVLRF
>NZ_CP022139.1|WP_000108313.1|1048062_1048425_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP022139.1|WP_080227865.1|1048729_1050529_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPALDGKMPGITLISASQTGNARRVAEALRDDLLAASLNVTLVNAGDYKFKQIASEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPTLNDTAFAVFSMGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAINEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEALQWHFELTVNTAGIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPAQLDADALVGLLRPLTPRLYSIASSQAEVENEAHLTVGVVRYDIEGRARAGGASSFLADRIKEDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAENAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLCEQGAELWRWINDGAHIYVCGDARRMAADVETALLQVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP022139.1|WP_080227866.1|1050528_1052241_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTAQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHAVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGMETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIVASVPESQKAKIETLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEALMTKHGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKAREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP022139.1|WP_088744617.1|1052349_1053084_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNDLPKVDRILALAETNAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLINQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWEQGYLSVGDTHTTRKWESGMAEEETRFFGLKRECGLHEG
>NZ_CP022139.1|WP_080226963.1|1053360_1054311_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLNFGNHQNYTLNETRLAHLLSSDREKATHMGSWDKLQEHFRTEKKGHALEILYDIIHGRGPEKPGEMEVDVEDMNKIYAFKQLQYLACPAHQDLFKIEMDASQTQFLFMVGDTVISQSKIQDILNVSDNVVIPAMNKEEKHLFLKICEVLGSNITWHPELFQTSVSDLRKAVTATPEIKEAVYKMMRPAETNDYAPVAWRPCLNEGDREKLACLNAGHFDITTQFSKIGYREVQGEVTFDIIHPCITYLLHSYSPMTEFKNANATFLDRFNEGFNNYYKNKVDIDPLLERIYIKHEHSLRISKDGAYRNILL
>NZ_CP022139.1|WP_141030836.1|1054706_1055075_-|CRISPR-associated-protein-Cas3
MATQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDTGEASYYSKRFGLVG
>NZ_CP022139.1|WP_080226964.1|1055717_1056764_-|aminopeptidase
MFSATRRFTVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYITKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKGIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYDIAASTNPGRNPSSPKGTGCCNDAEVFDKAGMSVLSVEATNWNLGKKDGYQQRTKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP022139.1|WP_079809415.1|1057015_1057924_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTASAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP022139.1|WP_080226965.1|1057933_1059373_+|sulfate-adenylyltransferase-subunit-CysN
MNTTLAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMPWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYVGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANEALAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVREPVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA

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Crispr_ID: NZ_CP022139_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022139_2

1055126-1055703

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

9 spacers

The CRISPR arrays of NZ_CP022139_2

>merge|NZ_CP022139|2|1055126-1055703|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGATCTTGCGCCAATGCTTTTTTACTCTTCCCTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAACAACTACCGGTTAATTGTGGCAATTGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACGAATGAGAACCCATTTAGAGGTCGAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGATATTTAAATATGGTAACTAAAATATATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAAACACTCGCAGAGCTGCTTGGTATCACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGACGAGAAGAGAAAACAGATTTTAACGGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGACATGCAAGCAGACGTCGTGAAAAAACTCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATAACGCTCAGATACCACCAAAGCAGGTAGTGTTCCCCGCGCCAGCGGGGATAAACCCAGGGGGATATGATTATTACATGGATTGATTCAGTGTTCCCCGCGTCAGCGGGGATAAACGC

>NZ_CP022139|2|2|1055126-1055702|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATCTTGCGCCAATGCTTTTTTACTCTTCCCTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAAACAACTACCGGTTAATTGTGGCAATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTACGAATGAGAACCCATTTAGAGGTCGAATC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGGATATTTAAATATGGTAACTAAAATATATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCAAACACTCGCAGAGCTGCTTGGTATCACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGACGAGAAGAGAAAACAGATTTTAACGGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGACATGCAAGCAGACGTCGTGAAAAAACTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAGATAACGCTCAGATACCACCAAAGCAGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	CAGGGGGATATGATTATTACATGGATTGATTCA
GTGTTCCCCGCGTCAGCGGGGATAAACG

>NZ_CP022139|2|2|1055126-1055703|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTTGCGCCAATGCTTTTTTACTCTTCCCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAACTACCGGTTAATTGTGGCAATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGAATGAGAACCCATTTAGAGGTCGAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGATATTTAAATATGGTAACTAAAATATATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAAACACTCGCAGAGCTGCTTGGTATCACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGAGAAGAGAAAACAGATTTTAACGGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACATGCAAGCAGACGTCGTGAAAAAACTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATAACGCTCAGATACCACCAAAGCAGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGGGGATATGATTATTACATGGATTGATTCA
GTGTTCCCCGCGTCAGCGGGGATAAACGC

>NZ_CP022139|2|2|1055126-1055703|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTTGCGCCAATGCTTTTTTACTCTTCCCTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAACTACCGGTTAATTGTGGCAATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGAATGAGAACCCATTTAGAGGTCGAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGATATTTAAATATGGTAACTAAAATATATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAAACACTCGCAGAGCTGCTTGGTATCACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGACGAGAAGAGAAAACAGATTTTAACGGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACATGCAAGCAGACGTCGTGAAAAAACTCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATAACGCTCAGATACCACCAAAGCAGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGGGGGATATGATTATTACATGGATTGATTCA
GTGTTCCCCGCGTCAGCGGGGATAAACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022139.1\|WP_001221538.1\|1063075_1063837_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP022139.1\|WP_079809415.1\|1057015_1057924_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP022139.1\|WP_080226266.1\|1044068_1044740_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP022139.1\|WP_080226968.1\|1060859_1061570_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP022139.1\|WP_000108313.1\|1048062_1048425_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP022139.1\|WP_080226963.1\|1053360_1054311_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP022139.1\|WP_080227866.1\|1050528_1052241_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP022139.1\|WP_080226967.1\|1059982_1060339_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP022139.1\|WP_080227865.1\|1048729_1050529_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP022139.1\|WP_080226966.1\|1059359_1059965_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP022139.1\|WP_141030836.1\|1054706_1055075_-\|CRISPR-associated-protein-Cas3	unknown	unknown	unknown
NZ_CP022139.1\|WP_080226267.1\|1042633_1043932_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP022139.1\|WP_000517481.1\|1060529_1060841_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP022139.1\|WP_080226970.1\|1062045_1063095_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP022139.1\|WP_088744617.1\|1052349_1053084_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP022139.1\|WP_000210863.1\|1040913_1042551_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP022139.1\|WP_080226969.1\|1061569_1062049_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP022139.1\|WP_080226964.1\|1055717_1056764_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP022139.1\|WP_080226965.1\|1057933_1059373_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP022139.1\|WP_088744616.1\|1047175_1047973_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
NZ_CP022139.1\|WP_001221538.1\|1063075_1063837_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP022139.1\|WP_079809415.1\|1057015_1057924_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP022139.1\|WP_080226266.1\|1044068_1044740_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	2.57918e-153
NZ_CP022139.1\|WP_080226968.1\|1060859_1061570_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.12004e-118
NZ_CP022139.1\|WP_000108313.1\|1048062_1048425_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP022139.1\|WP_080226963.1\|1053360_1054311_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	1.30424e-175
NZ_CP022139.1\|WP_080227866.1\|1050528_1052241_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP022139.1\|WP_080226967.1\|1059982_1060339_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	5.9904e-49
NZ_CP022139.1\|WP_080227865.1\|1048729_1050529_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP022139.1\|WP_080226966.1\|1059359_1059965_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	2.11934e-144
NZ_CP022139.1\|WP_080226267.1\|1042633_1043932_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP022139.1\|WP_000517481.1\|1060529_1060841_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	9.72909e-65
NZ_CP022139.1\|WP_080226970.1\|1062045_1063095_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP022139.1\|WP_088744617.1\|1052349_1053084_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.63211e-137
NZ_CP022139.1\|WP_000210863.1\|1040913_1042551_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP022139.1\|WP_080226969.1\|1061569_1062049_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	8.05194e-104
NZ_CP022139.1\|WP_080226964.1\|1055717_1056764_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP022139.1\|WP_080226965.1\|1057933_1059373_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP022139.1\|WP_088744616.1\|1047175_1047973_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.1528e-97

>NZ_CP022139.1|WP_141030836.1|1054706_1055075_-|CRISPR-associated-protein-Cas3
MATQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDTGEASYYSKRFGLVG
>NZ_CP022139.1|WP_080226963.1|1053360_1054311_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLNFGNHQNYTLNETRLAHLLSSDREKATHMGSWDKLQEHFRTEKKGHALEILYDIIHGRGPEKPGEMEVDVEDMNKIYAFKQLQYLACPAHQDLFKIEMDASQTQFLFMVGDTVISQSKIQDILNVSDNVVIPAMNKEEKHLFLKICEVLGSNITWHPELFQTSVSDLRKAVTATPEIKEAVYKMMRPAETNDYAPVAWRPCLNEGDREKLACLNAGHFDITTQFSKIGYREVQGEVTFDIIHPCITYLLHSYSPMTEFKNANATFLDRFNEGFNNYYKNKVDIDPLLERIYIKHEHSLRISKDGAYRNILL
>NZ_CP022139.1|WP_088744617.1|1052349_1053084_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNDLPKVDRILALAETNAELETLTAEERVTWALENLPGEYVLSSSFGIQAAVSLHLINQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALQELNAQTWFAGLRREQSGSRAHLPVLAIQRGIFKVLPIIDWDNRTVYQYLQKQGLKYHPLWEQGYLSVGDTHTTRKWESGMAEEETRFFGLKRECGLHEG
>NZ_CP022139.1|WP_080227866.1|1050528_1052241_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTAQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHAVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGMETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIVASVPESQKAKIETLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFVDKVEALMTKHGVGDEHIVLRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKAREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP022139.1|WP_080227865.1|1048729_1050529_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPALDGKMPGITLISASQTGNARRVAEALRDDLLAASLNVTLVNAGDYKFKQIASEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPTLNDTAFAVFSMGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQTAAAQWRARVVDVLKSRTPVVTPAQPVASGAINEIHTSPYTKEAPLRASLSLNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKLLPLAEALQWHFELTVNTAGIVENYATLTRSESLLPLVGDKAQLQHYAAATPIVDMVRFSPAQLDADALVGLLRPLTPRLYSIASSQAEVENEAHLTVGVVRYDIEGRARAGGASSFLADRIKEDGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAAENAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLCEQGAELWRWINDGAHIYVCGDARRMAADVETALLQVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP022139.1|WP_000108313.1|1048062_1048425_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP022139.1|WP_088744616.1|1047175_1047973_+|MBL-fold-metallo-hydrolase
MALTIRVLLENHKGPGADKSLRAKPGLSLLVQDESTSILFDTGPDGSFIQNALTMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMVYTRDPRPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPFTLWRVRRFLHEQKPEKLCGCHCTGAWGRLWLPEIIAPATGDVLRF
>NZ_CP022139.1|WP_080226266.1|1044068_1044740_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLYSILAKTKESDKWGAASSEDLLAVINRQSYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKTRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP022139.1|WP_080226267.1|1042633_1043932_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGRKEIKGQA
>NZ_CP022139.1|WP_000210863.1|1040913_1042551_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP022139.1|WP_080226964.1|1055717_1056764_-|aminopeptidase
MFSATRRFTVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYITKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKGIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYDIAASTNPGRNPSSPKGTGCCNDAEVFDKAGMSVLSVEATNWNLGKKDGYQQRTKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP022139.1|WP_079809415.1|1057015_1057924_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTASAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP022139.1|WP_080226965.1|1057933_1059373_+|sulfate-adenylyltransferase-subunit-CysN
MNTTLAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMPWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYVGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANEALAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIETIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVREPVERGVTPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP022139.1|WP_080226966.1|1059359_1059965_+|adenylyl-sulfate-kinase
MALHDENVVWYSHSVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVQERVGHDRFIEIYVDTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPESPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP022139.1|WP_080226967.1|1059982_1060339_+|DUF3561-family-protein
MPGMVKVTGFDMRNSHNITFTRSDAFIVDDDTTSSLPGAVVGFVSWLLALGMPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP022139.1|WP_000517481.1|1060529_1060841_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTNR
>NZ_CP022139.1|WP_080226968.1|1060859_1061570_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAETQWVLVHDAARPCLHRDDLARLLAISENSRVGGILASPVRDTMKRGEPGKTAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALIEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP022139.1|WP_080226969.1|1061569_1062049_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAATLGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP022139.1|WP_080226970.1|1062045_1063095_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLYGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNTFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQREALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP022139.1|WP_001221538.1|1063075_1063837_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NZ_CP022141.1	27378-27410	0	1.0
NZ_CP022139_1	1.25\|1046530\|33\|NZ_CP022139\|PILER-CR	1046530-1046562	33	NZ_CP022139.1	1662710-1662742	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NZ_CP022141.1	27379-27410	0	1.0
NZ_CP022139_1	1.57\|1046531\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046531-1046562	32	NZ_CP022139.1	1662711-1662742	0	1.0
NZ_CP022139_1	1.65\|1047019\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1047019-1047050	32	NZ_CP022139.1	4655754-4655785	0	1.0
NZ_CP022139_2	2.1\|1055154\|33\|NZ_CP022139\|PILER-CR	1055154-1055186	33	NZ_CP022139.1	2562345-2562377	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NZ_CP022141.1	56955-56987	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NZ_CP022141.1	53621-53653	0	1.0
NZ_CP022139_2	2.10\|1055155\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055155-1055186	32	NZ_CP022139.1	2562346-2562377	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NZ_CP022141.1	56955-56986	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NZ_CP022141.1	53621-53652	0	1.0
NZ_CP022139_1	1.26\|1046591\|33\|NZ_CP022139\|PILER-CR	1046591-1046623	33	NZ_CP022139.1	1649667-1649699	2	0.939
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	NZ_CP022139.1	1649668-1649699	2	0.938

1. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to position: 27378-27410, mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

2. spacer 1.25|1046530|33|NZ_CP022139|PILER-CR matches to position: 1662710-1662742, mismatch: 0, identity: 1.0

gttttcgcgccgtcctgaattgaaatggaaaca	CRISPR spacer
gttttcgcgccgtcctgaattgaaatggaaaca	Protospacer
*********************************

3. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 27379-27410, mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

4. spacer 1.57|1046531|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 1662711-1662742, mismatch: 0, identity: 1.0

ttttcgcgccgtcctgaattgaaatggaaaca	CRISPR spacer
ttttcgcgccgtcctgaattgaaatggaaaca	Protospacer
********************************

5. spacer 1.65|1047019|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 4655754-4655785, mismatch: 0, identity: 1.0

cacgaagggtccggttgtttttggatgccccc	CRISPR spacer
cacgaagggtccggttgtttttggatgccccc	Protospacer
********************************

6. spacer 2.1|1055154|33|NZ_CP022139|PILER-CR matches to position: 2562345-2562377, mismatch: 0, identity: 1.0

gatcttgcgccaatgcttttttactcttccctt	CRISPR spacer
gatcttgcgccaatgcttttttactcttccctt	Protospacer
*********************************

7. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to position: 56955-56987, mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

8. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to position: 53621-53653, mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

9. spacer 2.10|1055155|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 2562346-2562377, mismatch: 0, identity: 1.0

atcttgcgccaatgcttttttactcttccctt	CRISPR spacer
atcttgcgccaatgcttttttactcttccctt	Protospacer
********************************

10. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 56955-56986, mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

11. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 53621-53652, mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

12. spacer 1.26|1046591|33|NZ_CP022139|PILER-CR matches to position: 1649667-1649699, mismatch: 2, identity: 0.939

gatgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
gatgcgcctgccttttttccacatcaggctcgg	Protospacer
**********.*********** **********

13. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to position: 1649668-1649699, mismatch: 2, identity: 0.938

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
atgcgcctgccttttttccacatcaggctcgg	Protospacer
*********.*********** **********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	74677-74709	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	42401-42433	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	87656-87688	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	1679-1711	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	74535-74567	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	4747-4779	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	27378-27410	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	18081-18113	0	1.0
NZ_CP022139_1	1.12\|1045736\|33\|NZ_CP022139\|PILER-CR	1045736-1045768	33	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	1312-1344	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	4748-4779	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	27379-27410	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	18082-18113	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	74677-74708	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	42401-42432	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	1313-1344	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	87656-87687	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	1679-1710	0	1.0
NZ_CP022139_1	1.44\|1045737\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045737-1045768	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	74535-74566	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	33190-33222	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	56955-56987	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	50373-50405	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	42585-42617	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	13275-13307	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	33404-33436	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	130672-130704	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	57702-57734	0	1.0
NZ_CP022139_2	2.5\|1055398\|33\|NZ_CP022139\|PILER-CR	1055398-1055430	33	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	42244-42276	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	29853-29885	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	53621-53653	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	47036-47068	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	30069-30101	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	45920-45952	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	16611-16643	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	134008-134040	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	61037-61069	0	1.0
NZ_CP022139_2	2.8\|1055581\|33\|NZ_CP022139\|PILER-CR	1055581-1055613	33	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	45581-45613	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	33190-33221	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	56955-56986	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	50373-50404	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	42586-42617	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	13276-13307	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	33404-33435	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	130673-130704	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	57703-57734	0	1.0
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	42245-42276	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	CP034708	Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence	29853-29884	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	53621-53652	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	47036-47067	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	45921-45952	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NZ_LS997975	Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1	16612-16643	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	30069-30100	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	134009-134040	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	61038-61069	0	1.0
NZ_CP022139_2	2.17\|1055582\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055582-1055613	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	45582-45613	0	1.0
NZ_CP022139_1	1.21\|1046286\|33\|NZ_CP022139\|PILER-CR	1046286-1046318	33	MT261384	Salmonella virus PAT1, complete genome	17895-17927	2	0.939
NZ_CP022139_1	1.21\|1046286\|33\|NZ_CP022139\|PILER-CR	1046286-1046318	33	MT580116	Salmonella phage 65FD, complete genome	25088-25120	2	0.939
NZ_CP022139_1	1.21\|1046286\|33\|NZ_CP022139\|PILER-CR	1046286-1046318	33	MT580117	Salmonella phage 66FD, complete genome	15926-15958	2	0.939
NZ_CP022139_1	1.22\|1046347\|33\|NZ_CP022139\|PILER-CR	1046347-1046379	33	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	1967-1999	2	0.939
NZ_CP022139_1	1.22\|1046347\|33\|NZ_CP022139\|PILER-CR	1046347-1046379	33	NC_049393	Escherichia phage ESSI2_ev040 genome assembly, chromosome: 1	1745-1777	2	0.939
NZ_CP022139_1	1.22\|1046347\|33\|NZ_CP022139\|PILER-CR	1046347-1046379	33	LR597637	Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1	2037-2069	2	0.939
NZ_CP022139_1	1.22\|1046347\|33\|NZ_CP022139\|PILER-CR	1046347-1046379	33	NC_049394	Escherichia phage ESSI2_ev129 genome assembly, chromosome: 1	1962-1994	2	0.939
NZ_CP022139_1	1.23\|1046408\|33\|NZ_CP022139\|PILER-CR	1046408-1046440	33	LR597637	Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1	22166-22198	2	0.939
NZ_CP022139_1	1.53\|1046287\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046287-1046318	32	MT261384	Salmonella virus PAT1, complete genome	17896-17927	2	0.938
NZ_CP022139_1	1.53\|1046287\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046287-1046318	32	MT580116	Salmonella phage 65FD, complete genome	25088-25119	2	0.938
NZ_CP022139_1	1.53\|1046287\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046287-1046318	32	MT580117	Salmonella phage 66FD, complete genome	15926-15957	2	0.938
NZ_CP022139_1	1.54\|1046348\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046348-1046379	32	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	1967-1998	2	0.938
NZ_CP022139_1	1.54\|1046348\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046348-1046379	32	NC_049393	Escherichia phage ESSI2_ev040 genome assembly, chromosome: 1	1745-1776	2	0.938
NZ_CP022139_1	1.54\|1046348\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046348-1046379	32	LR597637	Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1	2037-2068	2	0.938
NZ_CP022139_1	1.54\|1046348\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046348-1046379	32	NC_049394	Escherichia phage ESSI2_ev129 genome assembly, chromosome: 1	1962-1993	2	0.938
NZ_CP022139_1	1.55\|1046409\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046409-1046440	32	LR597637	Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1	22166-22197	2	0.938
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	18380-18411	4	0.875
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	4077-4108	4	0.875
NZ_CP022139_1	1.26\|1046591\|33\|NZ_CP022139\|PILER-CR	1046591-1046623	33	NZ_CP022925	Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B	18379-18411	5	0.848
NZ_CP022139_1	1.26\|1046591\|33\|NZ_CP022139\|PILER-CR	1046591-1046623	33	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	4076-4108	5	0.848
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	KU052037	Escherichia phage Rac-SA53, complete genome	8231-8262	5	0.844
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	15482-15513	5	0.844
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	KY271399	Klebsiella phage 5 LV-2017, complete genome	8191-8222	5	0.844
NZ_CP022139_1	1.26\|1046591\|33\|NZ_CP022139\|PILER-CR	1046591-1046623	33	KU052037	Escherichia phage Rac-SA53, complete genome	8230-8262	6	0.818
NZ_CP022139_1	1.26\|1046591\|33\|NZ_CP022139\|PILER-CR	1046591-1046623	33	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	15481-15513	6	0.818
NZ_CP022139_1	1.26\|1046591\|33\|NZ_CP022139\|PILER-CR	1046591-1046623	33	KY271399	Klebsiella phage 5 LV-2017, complete genome	8190-8222	6	0.818
NZ_CP022139_1	1.42\|1045615\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045615-1045646	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	89499-89530	6	0.812
NZ_CP022139_1	1.42\|1045615\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045615-1045646	32	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	122051-122082	6	0.812
NZ_CP022139_1	1.5\|1045309\|33\|NZ_CP022139\|PILER-CR	1045309-1045341	33	CP024689	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence	120737-120769	7	0.788
NZ_CP022139_1	1.10\|1045614\|33\|NZ_CP022139\|PILER-CR	1045614-1045646	33	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	89499-89531	7	0.788
NZ_CP022139_1	1.10\|1045614\|33\|NZ_CP022139\|PILER-CR	1045614-1045646	33	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	122051-122083	7	0.788
NZ_CP022139_1	1.34\|1045127\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045127-1045158	32	MH572385	Microviridae sp. isolate SD_SF_10, complete genome	1534-1565	7	0.781
NZ_CP022139_1	1.34\|1045127\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045127-1045158	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	2187363-2187394	7	0.781
NZ_CP022139_1	1.37\|1045310\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045310-1045341	32	CP024689	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence	120737-120768	7	0.781
NZ_CP022139_1	1.42\|1045615\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045615-1045646	32	MT889376	Arthrobacter phage Phives, complete genome	39969-40000	7	0.781
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	MK448904	Streptococcus phage Javan316, complete genome	17047-17078	7	0.781
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	944815-944846	7	0.781
NZ_CP022139_2	2.13\|1055338\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055338-1055369	32	NZ_CP045276	Bacillus megaterium strain FDU301 plasmid pFDU301D, complete sequence	23779-23810	7	0.781
NZ_CP022139_1	1.2\|1045126\|33\|NZ_CP022139\|PILER-CR	1045126-1045158	33	MH572385	Microviridae sp. isolate SD_SF_10, complete genome	1534-1566	8	0.758
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	KX397366	Erwinia phage vB_EamM_ChrisDB, complete genome	127539-127571	8	0.758
NZ_CP022139_1	1.10\|1045614\|33\|NZ_CP022139\|PILER-CR	1045614-1045646	33	MT889376	Arthrobacter phage Phives, complete genome	39969-40001	8	0.758
NZ_CP022139_1	1.39\|1045432\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045432-1045463	32	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	68235-68266	8	0.75
NZ_CP022139_1	1.39\|1045432\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045432-1045463	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	316197-316228	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	NZ_KX443401	Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence	94851-94882	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	NZ_KX443399	Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence	99103-99134	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	NZ_KX443400	Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence	99128-99159	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	NZ_KX443398	Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence	99116-99147	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	NZ_KP851975	Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence	99242-99273	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	NZ_KF439868	Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence	98244-98275	8	0.75
NZ_CP022139_1	1.40\|1045493\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045493-1045524	32	KX397366	Erwinia phage vB_EamM_ChrisDB, complete genome	127539-127570	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_KU130396	Escherichia coli strain S68 plasmid pS68, complete sequence	27756-27787	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP010130	Escherichia coli strain C9 plasmid A, complete genome	56485-56516	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP010233	Escherichia coli strain S30 plasmid B, complete sequence	99317-99348	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP032445	Salmonella enterica subsp. enterica serovar Fresno strain USMARC-69835 plasmid pSFR1-USMARC-69835, complete sequence	40880-40911	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP033963	Klebsiella pneumoniae strain L482 plasmid p4_L382, complete sequence	59132-59163	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP020547	Escherichia coli strain ZJ3920 plasmid pZJ3920-2, complete sequence	75629-75660	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MN915010	Escherichia coli strain TJ-33 plasmid pNDM-TJ33, complete sequence	154313-154344	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MN915012	Escherichia coli strain GD-33 plasmid pNDM33-2, complete sequence	43979-44010	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MN915013	Escherichia coli strain TD-33 plasmid pNDM-TD33, complete sequence	81762-81793	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP045189	Escherichia coli strain NT1F31 plasmid pNT1F31-96kb, complete sequence	93554-93585	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP027327	Escherichia coli strain 2013C-4830 plasmid unnamed2, complete sequence	67662-67693	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP045756	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid p2CFSAN000752, complete sequence	2717-2748	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP025239	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 plasmid pSNE2-1928, complete sequence	54028-54059	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MK181565	Escherichia coli plasmid pESBL20140131, complete sequence	64926-64957	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MK181566	Escherichia coli plasmid p15078279, complete sequence	64186-64217	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	CP034251	Salmonella enterica subsp. enterica serovar Derby strain Sa64 plasmid pSa64T-188, complete sequence	177385-177416	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	CP034252	Salmonella enterica subsp. enterica serovar Derby strain Sa64 plasmid pSa64-96, complete sequence	64169-64200	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_024980	Escherichia coli strain ESBL-315 plasmid pESBL-315, complete sequence	57041-57072	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_024978	Escherichia coli strain ESBL-283 plasmid pESBL-283, complete sequence	67128-67159	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP040548	Klebsiella pneumoniae strain CR-HvKP5 plasmid pCR-HvKP5-p3, complete sequence	55970-56001	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_019043	Escherichia coli plasmid pND11_107, complete sequence	61093-61124	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP022734	Escherichia coli strain SA186 plasmid pSA186_5, complete sequence	24794-24825	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP039490	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid pCFSAN000752, complete sequence	86140-86171	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP031615	Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C2, complete sequence	28479-28510	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP024976	Escherichia coli strain CV839-15 plasmid pCV839-15-p2, complete sequence	65031-65062	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP030191	Salmonella enterica strain SA20104250 plasmid pSA20104250.1, complete sequence	65433-65464	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MG516908	Escherichia coli plasmid pEc42, complete sequence	69857-69888	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	CP010831	Shigella sonnei strain FORC_011 plasmid pFORC11.2, complete sequence	25742-25773	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP025751	Escherichia coli strain CV839-06 plasmid pCV839-06-p1, complete sequence	74889-74920	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	CP051282	Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Junco_ST-35 plasmid pST35-95663.1B, complete sequence	36632-36663	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP032495	Salmonella enterica subsp. enterica serovar Typhimurium strain SO21 plasmid pSO21_118, complete sequence	74847-74878	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP040542	Klebsiella pneumoniae strain CR-HvKP4 plasmid pCR-HvKP4-p3, complete sequence	55975-56006	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MN419435	Escherichia coli strain 2016-40-14263 plasmid p14263, complete sequence	2574-2605	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_019111	Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSal8934a, complete sequence	44795-44826	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_016904	Escherichia coli KO11FL plasmid pEKO1101, complete sequence	42670-42701	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_017665	Escherichia coli W plasmid pRK1, complete sequence	16504-16535	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP032888	Escherichia coli strain SCEC020022 plasmid pCTXM14_020022, complete sequence	65806-65837	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP041441	Escherichia coli strain YPE12 plasmid pYPE12-122k, complete sequence	78600-78631	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_MH674341	Escherichia coli strain EC07 plasmid pUR-EC07, complete sequence	62085-62116	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_MN241905	Salmonella enterica subsp. enterica serovar Typhimurium strain STM3224 plasmid pUY_STM96, complete sequence	44892-44923	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP041394	Escherichia coli strain ECOL-18-VL-LA-PA-Ryan-0026 plasmid p45407_2	21916-21947	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MN262643	Escherichia coli strain EC009 plasmid pEC009.2, complete sequence	70864-70895	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MN124285	Escherichia coli strain RKI3099 plasmid pRKI3099a, complete sequence	71674-71705	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_KY748189	Escherichia coli strain EC007 plasmid pEC007, complete sequence	63151-63182	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_KY865323	Escherichia coli strain SY286M plasmid pECM13, complete sequence	67593-67624	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_KY748188	Escherichia coli strain EC006 plasmid pEC006, complete sequence	63151-63182	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_KY748190	Escherichia coli strain EC008 plasmid pEC008, complete sequence	80383-80414	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_MG948333	Escherichia coli strain 2454 plasmid p2454, complete sequence	44386-44417	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_023326	Escherichia coli ACN001 plasmid pACN001-F, complete sequence	75514-75545	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NC_019104	Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A_95, complete sequence	52666-52697	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	70214-70245	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP048361	Escherichia coli strain 53 plasmid p53_B, complete sequence	44471-44502	8	0.75
NZ_CP022139_1	1.46\|1045859\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045859-1045890	32	NZ_CP040536	Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-p3, complete sequence	55970-56001	8	0.75
NZ_CP022139_1	1.54\|1046348\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046348-1046379	32	GU323318	Enterobacteria phage CC31, complete genome	163051-163082	8	0.75
NZ_CP022139_1	1.62\|1046836\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046836-1046867	32	MH884512	Bacillus phage vB_BpsS-140, complete genome	35801-35832	8	0.75
NZ_CP022139_1	1.64\|1046958\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046958-1046989	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	282732-282763	8	0.75
NZ_CP022139_2	2.1\|1055154\|33\|NZ_CP022139\|PILER-CR	1055154-1055186	33	NZ_CP038614	Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence	49331-49363	8	0.758
NZ_CP022139_2	2.10\|1055155\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055155-1055186	32	NZ_CP038614	Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence	49332-49363	8	0.75
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	NZ_KX443401	Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence	94851-94883	9	0.727
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	NZ_KX443399	Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence	99103-99135	9	0.727
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	NZ_KX443400	Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence	99128-99160	9	0.727
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	NZ_KX443398	Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence	99116-99148	9	0.727
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	NZ_KP851975	Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence	99242-99274	9	0.727
NZ_CP022139_1	1.8\|1045492\|33\|NZ_CP022139\|PILER-CR	1045492-1045524	33	NZ_KF439868	Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence	98244-98276	9	0.727
NZ_CP022139_1	1.22\|1046347\|33\|NZ_CP022139\|PILER-CR	1046347-1046379	33	GU323318	Enterobacteria phage CC31, complete genome	163050-163082	9	0.727
NZ_CP022139_1	1.30\|1046835\|33\|NZ_CP022139\|PILER-CR	1046835-1046867	33	MH884512	Bacillus phage vB_BpsS-140, complete genome	35800-35832	9	0.727
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	NC_047733	Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome	34842-34873	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	JF974289	Synechococcus phage S-RIM8 A.HR3, complete genome	34841-34872	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	MK493323	Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome	34839-34870	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	MK493325	Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome	35091-35122	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	MK493322	Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome	35091-35122	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	KX349288	Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome	35091-35122	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	NC_020486	Synechococcus phage S-RIM8 A.HR1, complete genome	34841-34872	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	KX349286	Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome	35422-35453	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	HQ317385	Synechococcus phage S-RIM8 A.HR5, complete genome	34841-34872	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	MK493324	Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome	35091-35122	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	KX349290	Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome	35091-35122	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	KX349285	Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome	34839-34870	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	KX349287	Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome	35091-35122	9	0.719
NZ_CP022139_1	1.36\|1045249\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045249-1045280	32	JF974293	Cyanophage KBS-M-1A genomic sequence	11249-11280	9	0.719
NZ_CP022139_1	1.51\|1046165\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046165-1046196	32	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	344536-344567	9	0.719
NZ_CP022139_2	2.13\|1055338\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055338-1055369	32	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	39204-39235	9	0.719
NZ_CP022139_2	2.13\|1055338\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055338-1055369	32	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	74364-74395	9	0.719
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	JF974293	Cyanophage KBS-M-1A genomic sequence	11248-11280	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	NC_047733	Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome	34842-34874	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	JF974289	Synechococcus phage S-RIM8 A.HR3, complete genome	34841-34873	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	MK493323	Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome	34839-34871	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	MK493325	Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome	35091-35123	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	MK493322	Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome	35091-35123	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	KX349288	Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome	35091-35123	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	NC_020486	Synechococcus phage S-RIM8 A.HR1, complete genome	34841-34873	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	KX349286	Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome	35422-35454	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	HQ317385	Synechococcus phage S-RIM8 A.HR5, complete genome	34841-34873	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	MK493324	Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome	35091-35123	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	KX349290	Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome	35091-35123	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	KX349285	Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome	34839-34871	10	0.697
NZ_CP022139_1	1.4\|1045248\|33\|NZ_CP022139\|PILER-CR	1045248-1045280	33	KX349287	Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome	35091-35123	10	0.697
NZ_CP022139_1	1.35\|1045188\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045188-1045219	32	NZ_CP033873	Caulobacter sp. FWC26 plasmid p1, complete sequence	262167-262198	10	0.688
NZ_CP022139_1	1.38\|1045371\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045371-1045402	32	NZ_CP041067	Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence	47029-47060	10	0.688
NZ_CP022139_1	1.52\|1046226\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046226-1046257	32	NZ_CP050094	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence	239891-239922	10	0.688
NZ_CP022139_1	1.58\|1046592\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046592-1046623	32	NZ_CP025946	Escherichia coli strain SCEC020023 plasmid p2_020023, complete sequence	6361-6392	10	0.688
NZ_CP022139_1	1.60\|1046714\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046714-1046745	32	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	521518-521549	10	0.688
NZ_CP022139_1	1.60\|1046714\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046714-1046745	32	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	482097-482128	10	0.688
NZ_CP022139_2	2.13\|1055338\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055338-1055369	32	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	43285-43316	10	0.688
NZ_CP022139_1	1.37\|1045310\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1045310-1045341	32	AP017993	Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence	71103-71134	11	0.656
NZ_CP022139_1	1.60\|1046714\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1046714-1046745	32	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	354209-354240	11	0.656
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NC_048647	UNVERIFIED: Klebsiella phage KNP2 genomic sequence	12556-12587	11	0.656
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	MK024806	Proteus phage Mydo, complete genome	132169-132200	11	0.656
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	KX452695	UNVERIFIED: Klebsiella phage KPN2 genomic sequence	12556-12587	11	0.656
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NC_048656	Klebsiella phage vB_KpnM_BIS47, complete genome	5274-5305	11	0.656
NZ_CP022139_2	2.14\|1055399\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055399-1055430	32	NC_028659	Klebsiella phage vB_KpnM_KB57, complete genome	23048-23079	11	0.656
NZ_CP022139_2	2.18\|1055643\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055643-1055674	32	MN047793	Xanthomonas phage Xoo-sp13, complete genome	111968-111999	11	0.656

1. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

2. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

3. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

4. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

5. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

6. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

7. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

8. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

9. spacer 1.12|1045736|33|NZ_CP022139|PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gggactaaatcgcagatactgctgtccagagca	CRISPR spacer
gggactaaatcgcagatactgctgtccagagca	Protospacer
*********************************

10. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

11. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

12. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

13. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

14. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

15. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

16. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

17. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

18. spacer 1.44|1045737|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

ggactaaatcgcagatactgctgtccagagca	CRISPR spacer
ggactaaatcgcagatactgctgtccagagca	Protospacer
********************************

19. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

20. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

21. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

22. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

23. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

24. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

25. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

26. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

27. spacer 2.5|1055398|33|NZ_CP022139|PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
gcgcaaacactcgcagagctgcttggtatcaca	Protospacer
*********************************

28. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

29. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

30. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

31. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

32. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

33. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

34. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

35. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

36. spacer 2.8|1055581|33|NZ_CP022139|PILER-CR matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

gcagataacgctcagataccaccaaagcaggta	CRISPR spacer
gcagataacgctcagataccaccaaagcaggta	Protospacer
*********************************

37. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

38. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

39. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

40. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

41. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

42. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

43. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

44. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

45. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
cgcaaacactcgcagagctgcttggtatcaca	Protospacer
********************************

46. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP034708 (Salmonella enterica subsp. enterica serovar Waycross strain RSE24 plasmid pRSE24, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

47. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

48. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

49. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

50. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_LS997975 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pBT1) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

51. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

52. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

53. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

54. spacer 2.17|1055582|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 0, identity: 1.0

cagataacgctcagataccaccaaagcaggta	CRISPR spacer
cagataacgctcagataccaccaaagcaggta	Protospacer
********************************

55. spacer 1.21|1046286|33|NZ_CP022139|PILER-CR matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 2, identity: 0.939

gcggtaacgcaaattcttggttcgaccttgtac	CRISPR spacer
gcggtaacgcaaatacatggttcgaccttgtac	Protospacer
************** * ****************

56. spacer 1.21|1046286|33|NZ_CP022139|PILER-CR matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 2, identity: 0.939

gcggtaacgcaaattcttggttcgaccttgtac	CRISPR spacer
gcggtaacgcaaatacatggttcgaccttgtac	Protospacer
************** * ****************

57. spacer 1.21|1046286|33|NZ_CP022139|PILER-CR matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 2, identity: 0.939

gcggtaacgcaaattcttggttcgaccttgtac	CRISPR spacer
gcggtaacgcaaatacatggttcgaccttgtac	Protospacer
************** * ****************

58. spacer 1.22|1046347|33|NZ_CP022139|PILER-CR matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

gaaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
gaaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
*************************..******

59. spacer 1.22|1046347|33|NZ_CP022139|PILER-CR matches to NC_049393 (Escherichia phage ESSI2_ev040 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

gaaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
gaaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
*************************..******

60. spacer 1.22|1046347|33|NZ_CP022139|PILER-CR matches to LR597637 (Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

gaaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
gaaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
*************************..******

61. spacer 1.22|1046347|33|NZ_CP022139|PILER-CR matches to NC_049394 (Escherichia phage ESSI2_ev129 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

gaaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
gaaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
*************************..******

62. spacer 1.23|1046408|33|NZ_CP022139|PILER-CR matches to LR597637 (Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.939

agtcattcccgtttctggaaatcgtgggggaac	CRISPR spacer
agtctttcccgtttcttgaaatcgtgggggaac	Protospacer
**** *********** ****************

63. spacer 1.53|1046287|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MT261384 (Salmonella virus PAT1, complete genome) position: , mismatch: 2, identity: 0.938

cggtaacgcaaattcttggttcgaccttgtac	CRISPR spacer
cggtaacgcaaatacatggttcgaccttgtac	Protospacer
************* * ****************

64. spacer 1.53|1046287|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MT580116 (Salmonella phage 65FD, complete genome) position: , mismatch: 2, identity: 0.938

cggtaacgcaaattcttggttcgaccttgtac	CRISPR spacer
cggtaacgcaaatacatggttcgaccttgtac	Protospacer
************* * ****************

65. spacer 1.53|1046287|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MT580117 (Salmonella phage 66FD, complete genome) position: , mismatch: 2, identity: 0.938

cggtaacgcaaattcttggttcgaccttgtac	CRISPR spacer
cggtaacgcaaatacatggttcgaccttgtac	Protospacer
************* * ****************

66. spacer 1.54|1046348|32|NZ_CP022139|CRISPRCasFinder,CRT matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

aaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
aaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
************************..******

67. spacer 1.54|1046348|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_049393 (Escherichia phage ESSI2_ev040 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

aaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
aaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
************************..******

68. spacer 1.54|1046348|32|NZ_CP022139|CRISPRCasFinder,CRT matches to LR597637 (Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

aaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
aaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
************************..******

69. spacer 1.54|1046348|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_049394 (Escherichia phage ESSI2_ev129 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

aaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
aaaaactgacgtggtttgaacgcaaagtgctg	Protospacer
************************..******

70. spacer 1.55|1046409|32|NZ_CP022139|CRISPRCasFinder,CRT matches to LR597637 (Escherichia phage ESSI2_ev239 genome assembly, chromosome: 1) position: , mismatch: 2, identity: 0.938

gtcattcccgtttctggaaatcgtgggggaac	CRISPR spacer
gtctttcccgtttcttgaaatcgtgggggaac	Protospacer
*** *********** ****************

71. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 4, identity: 0.875

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
atttgcctgtcttttcaccacttcaggctcgg	Protospacer
** .***********. ***************

72. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 4, identity: 0.875

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
atttgcctgtcttttcaccacttcaggctcgg	Protospacer
** .***********. ***************

73. spacer 1.26|1046591|33|NZ_CP022139|PILER-CR matches to NZ_CP022925 (Klebsiella pneumoniae strain ST307PT01 plasmid pJYC01B) position: , mismatch: 5, identity: 0.848

gatgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
tatttgcctgtcttttcaccacttcaggctcgg	Protospacer
 ** .***********. ***************

74. spacer 1.26|1046591|33|NZ_CP022139|PILER-CR matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 5, identity: 0.848

gatgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
tatttgcctgtcttttcaccacttcaggctcgg	Protospacer
 ** .***********. ***************

75. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KU052037 (Escherichia phage Rac-SA53, complete genome) position: , mismatch: 5, identity: 0.844

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
gtatgcctgtctttttaccactttaggctcgg	Protospacer
.*..************ ******.********

76. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
gtttgcctgtcttttaaccacttcaggctcgg	Protospacer
.* .***********  ***************

77. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 5, identity: 0.844

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
gtatgcctgtcttttaaccacttcaggctcgg	Protospacer
.*..***********  ***************

78. spacer 1.26|1046591|33|NZ_CP022139|PILER-CR matches to KU052037 (Escherichia phage Rac-SA53, complete genome) position: , mismatch: 6, identity: 0.818

gatgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
tgtatgcctgtctttttaccactttaggctcgg	Protospacer
 .*..************ ******.********

79. spacer 1.26|1046591|33|NZ_CP022139|PILER-CR matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 6, identity: 0.818

gatgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
tgtttgcctgtcttttaaccacttcaggctcgg	Protospacer
 .* .***********  ***************

80. spacer 1.26|1046591|33|NZ_CP022139|PILER-CR matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 6, identity: 0.818

gatgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
tgtatgcctgtcttttaaccacttcaggctcgg	Protospacer
 .*..***********  ***************

81. spacer 1.42|1045615|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgacggcgtagagcttgccttgggtacgcc	CRISPR spacer
ggcgagggcgtcgagcttgccttgggtctgtg	Protospacer
***** ***** *************** .*.

82. spacer 1.42|1045615|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 6, identity: 0.812

ggcgacggcgtagagcttgccttgggtacgcc	CRISPR spacer
ggcgagggcgtcgagcttgccttgggtctgtg	Protospacer
***** ***** *************** .*.

83. spacer 1.5|1045309|33|NZ_CP022139|PILER-CR matches to CP024689 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence) position: , mismatch: 7, identity: 0.788

tcaggtactctatcctgataatgttcttcagcc	CRISPR spacer
tatgcgactctatcatgataatgtttttcagct	Protospacer
*  *  ******** **********.******.

84. spacer 1.10|1045614|33|NZ_CP022139|PILER-CR matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 7, identity: 0.788

gggcgacggcgtagagcttgccttgggtacgcc	CRISPR spacer
tggcgagggcgtcgagcttgccttgggtctgtg	Protospacer
 ***** ***** *************** .*.

85. spacer 1.10|1045614|33|NZ_CP022139|PILER-CR matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 7, identity: 0.788

gggcgacggcgtagagcttgccttgggtacgcc	CRISPR spacer
tggcgagggcgtcgagcttgccttgggtctgtg	Protospacer
 ***** ***** *************** .*.

86. spacer 1.34|1045127|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MH572385 (Microviridae sp. isolate SD_SF_10, complete genome) position: , mismatch: 7, identity: 0.781

aattagaaatgatcgatgtagccaggaacgga	CRISPR spacer
acctagaaatgatcgattaagccaggaacact	Protospacer
* .**************  **********.

87. spacer 1.34|1045127|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 7, identity: 0.781

aattagaaa---tgatcgatgtagccaggaacgga	CRISPR spacer
---ccgaaatcgtgatcgatggcgccaggaacgga	Protospacer
   . ****   *********  ************

88. spacer 1.37|1045310|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP024689 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-5-125K, complete sequence) position: , mismatch: 7, identity: 0.781

caggtactctatcctgataatgttcttcagcc	CRISPR spacer
atgcgactctatcatgataatgtttttcagct	Protospacer
  *  ******** **********.******.

89. spacer 1.42|1045615|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MT889376 (Arthrobacter phage Phives, complete genome) position: , mismatch: 7, identity: 0.781

ggcgacggcgtagagcttgccttgggtacgcc	CRISPR spacer
ggcggcggcgtagagcttgccttcggcgatct	Protospacer
****.****************** **..  *.

90. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK448904 (Streptococcus phage Javan316, complete genome) position: , mismatch: 7, identity: 0.781

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
aagcgcctgtctttttaccacttcaatctaac	Protospacer
* ************** ********. ** .

91. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.781

atgcgcctgtcttttttccacttca--ggctcgg	CRISPR spacer
atgggcctgtcatttttccacttgaacgactt--	Protospacer
*** ******* *********** *  *.**.

92. spacer 2.13|1055338|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP045276 (Bacillus megaterium strain FDU301 plasmid pFDU301D, complete sequence) position: , mismatch: 7, identity: 0.781

---aggatatttaaatatggtaactaaaatatatt	CRISPR spacer
ttttgaata---aactatggtaaataaaatatatt	Protospacer
    *.***   ** ******** ***********

93. spacer 1.2|1045126|33|NZ_CP022139|PILER-CR matches to MH572385 (Microviridae sp. isolate SD_SF_10, complete genome) position: , mismatch: 8, identity: 0.758

gaattagaaatgatcgatgtagccaggaacgga	CRISPR spacer
cacctagaaatgatcgattaagccaggaacact	Protospacer
 * .**************  **********.

94. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 8, identity: 0.758

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ggcgttccggtcgtgtcgtcgccgtacaccgcc	Protospacer
*  **.   ****.****** ************

95. spacer 1.10|1045614|33|NZ_CP022139|PILER-CR matches to MT889376 (Arthrobacter phage Phives, complete genome) position: , mismatch: 8, identity: 0.758

gggcgacggcgtagagcttgccttgggtacgcc	CRISPR spacer
cggcggcggcgtagagcttgccttcggcgatct	Protospacer
 ****.****************** **..  *.

96. spacer 1.39|1045432|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 8, identity: 0.75

ttaactgcgtcaatatcggtgatgataactct	CRISPR spacer
atgacatcgtcaagatcggtgatgatagctac	Protospacer
 *.**  ****** *************.** .

97. spacer 1.39|1045432|32|NZ_CP022139|CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.75

ttaactgcgtcaatatcggtgatgataactct	CRISPR spacer
aaagttccgtccatatcggtgacgataacttt	Protospacer
  *..* **** **********.*******.*

98. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KX443401 (Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
cggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
*******************  ***  .* .*

99. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KX443399 (Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
cggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
*******************  ***  .* .*

100. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KX443400 (Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
cggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
*******************  ***  .* .*

101. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KX443398 (Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
cggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
*******************  ***  .* .*

102. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KP851975 (Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
cggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
*******************  ***  .* .*

103. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KF439868 (Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
cggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
*******************  ***  .* .*

104. spacer 1.40|1045493|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 8, identity: 0.75

cggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
gcgttccggtcgtgtcgtcgccgtacaccgcc	Protospacer
  **.   ****.****** ************

105. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KU130396 (Escherichia coli strain S68 plasmid pS68, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

106. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP010130 (Escherichia coli strain C9 plasmid A, complete genome) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

107. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP010233 (Escherichia coli strain S30 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

108. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP032445 (Salmonella enterica subsp. enterica serovar Fresno strain USMARC-69835 plasmid pSFR1-USMARC-69835, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

109. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP033963 (Klebsiella pneumoniae strain L482 plasmid p4_L382, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

110. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP020547 (Escherichia coli strain ZJ3920 plasmid pZJ3920-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

111. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN915010 (Escherichia coli strain TJ-33 plasmid pNDM-TJ33, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

112. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN915012 (Escherichia coli strain GD-33 plasmid pNDM33-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

113. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN915013 (Escherichia coli strain TD-33 plasmid pNDM-TD33, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

114. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP045189 (Escherichia coli strain NT1F31 plasmid pNT1F31-96kb, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

115. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP027327 (Escherichia coli strain 2013C-4830 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

116. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP045756 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid p2CFSAN000752, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

117. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP025239 (Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 plasmid pSNE2-1928, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

118. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK181565 (Escherichia coli plasmid pESBL20140131, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

119. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK181566 (Escherichia coli plasmid p15078279, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

120. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP034251 (Salmonella enterica subsp. enterica serovar Derby strain Sa64 plasmid pSa64T-188, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

121. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP034252 (Salmonella enterica subsp. enterica serovar Derby strain Sa64 plasmid pSa64-96, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

122. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_024980 (Escherichia coli strain ESBL-315 plasmid pESBL-315, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

123. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_024978 (Escherichia coli strain ESBL-283 plasmid pESBL-283, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

124. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP040548 (Klebsiella pneumoniae strain CR-HvKP5 plasmid pCR-HvKP5-p3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

125. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019043 (Escherichia coli plasmid pND11_107, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

126. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022734 (Escherichia coli strain SA186 plasmid pSA186_5, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

127. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP039490 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid pCFSAN000752, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

128. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP031615 (Klebsiella pneumoniae strain ZYST1 plasmid pZYST1C2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

129. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP024976 (Escherichia coli strain CV839-15 plasmid pCV839-15-p2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

130. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP030191 (Salmonella enterica strain SA20104250 plasmid pSA20104250.1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

131. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MG516908 (Escherichia coli plasmid pEc42, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

132. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP010831 (Shigella sonnei strain FORC_011 plasmid pFORC11.2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

133. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP025751 (Escherichia coli strain CV839-06 plasmid pCV839-06-p1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

134. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to CP051282 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Junco_ST-35 plasmid pST35-95663.1B, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

135. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP032495 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO21 plasmid pSO21_118, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

136. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP040542 (Klebsiella pneumoniae strain CR-HvKP4 plasmid pCR-HvKP4-p3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

137. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN419435 (Escherichia coli strain 2016-40-14263 plasmid p14263, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

138. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019111 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSal8934a, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

139. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_016904 (Escherichia coli KO11FL plasmid pEKO1101, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

140. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_017665 (Escherichia coli W plasmid pRK1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

141. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP032888 (Escherichia coli strain SCEC020022 plasmid pCTXM14_020022, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

142. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP041441 (Escherichia coli strain YPE12 plasmid pYPE12-122k, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

143. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_MH674341 (Escherichia coli strain EC07 plasmid pUR-EC07, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

144. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_MN241905 (Salmonella enterica subsp. enterica serovar Typhimurium strain STM3224 plasmid pUY_STM96, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

145. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP041394 (Escherichia coli strain ECOL-18-VL-LA-PA-Ryan-0026 plasmid p45407_2) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

146. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN262643 (Escherichia coli strain EC009 plasmid pEC009.2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

147. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN124285 (Escherichia coli strain RKI3099 plasmid pRKI3099a, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

148. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KY748189 (Escherichia coli strain EC007 plasmid pEC007, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

149. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KY865323 (Escherichia coli strain SY286M plasmid pECM13, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

150. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KY748188 (Escherichia coli strain EC006 plasmid pEC006, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

151. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_KY748190 (Escherichia coli strain EC008 plasmid pEC008, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

152. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_MG948333 (Escherichia coli strain 2454 plasmid p2454, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

153. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_023326 (Escherichia coli ACN001 plasmid pACN001-F, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

154. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_019104 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A_95, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

155. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

156. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP048361 (Escherichia coli strain 53 plasmid p53_B, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

157. spacer 1.46|1045859|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP040536 (Klebsiella pneumoniae strain CR-HvKP1 plasmid pCR-HvKP1-p3, complete sequence) position: , mismatch: 8, identity: 0.75

ttcccgctgtttatatccggtgtattgcagga	CRISPR spacer
tcttccatttttatatccggagtatagcagga	Protospacer
*...*  * *********** **** ******

158. spacer 1.54|1046348|32|NZ_CP022139|CRISPRCasFinder,CRT matches to GU323318 (Enterobacteria phage CC31, complete genome) position: , mismatch: 8, identity: 0.75

aaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
catagatgacgttgtttgaacgcatggtgcga	Protospacer
 * *. ****** *********** ***** .

159. spacer 1.62|1046836|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MH884512 (Bacillus phage vB_BpsS-140, complete genome) position: , mismatch: 8, identity: 0.75

tgtccgattattttatcgctatttgtgaaact	CRISPR spacer
tggaagattattttattgctattggtgaaggc	Protospacer
**   ***********.****** *****. .

160. spacer 1.64|1046958|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 8, identity: 0.75

acagggggaaccgggagcctccgcaagcttga	CRISPR spacer
aacgcgggaaccggaaacctccgcaagcgtcg	Protospacer
*  * *********.*.*********** * .

161. spacer 2.1|1055154|33|NZ_CP022139|PILER-CR matches to NZ_CP038614 (Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence) position: , mismatch: 8, identity: 0.758

gatcttgcgccaatgcttttttactcttccctt	CRISPR spacer
gatcttccgccaaggcttttttacgcataatct	Protospacer
****** ****** ********** * *  ..*

162. spacer 2.10|1055155|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP038614 (Arsenophonus nasoniae strain FIN plasmid pArsFIN2, complete sequence) position: , mismatch: 8, identity: 0.75

atcttgcgccaatgcttttttactcttccctt	CRISPR spacer
atcttccgccaaggcttttttacgcataatct	Protospacer
***** ****** ********** * *  ..*

163. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to NZ_KX443401 (Rhodococcus hoagii strain PAM1572 plasmid pVAPN1572, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ccggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
 *******************  ***  .* .*

164. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to NZ_KX443399 (Rhodococcus hoagii strain PAM1354 plasmid pVAPA1354, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ccggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
 *******************  ***  .* .*

165. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to NZ_KX443400 (Rhodococcus hoagii strain PAM1557 plasmid pVAPN1557, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ccggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
 *******************  ***  .* .*

166. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to NZ_KX443398 (Rhodococcus hoagii strain PAM1204 plasmid pVAPN1204, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ccggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
 *******************  ***  .* .*

167. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to NZ_KP851975 (Rhodococcus hoagii strain PAM2012 plasmid pVAPN2012, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ccggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
 *******************  ***  .* .*

168. spacer 1.8|1045492|33|NZ_CP022139|PILER-CR matches to NZ_KF439868 (Rhodococcus hoagii strain PAM1571 plasmid pVAPN1571, complete sequence) position: , mismatch: 9, identity: 0.727

gcggtcgatgtcgcgtcgtccccgtacaccgcc	CRISPR spacer
ccggtcgatgtcgcgtcgtcgacgtcggcgacg	Protospacer
 *******************  ***  .* .*

169. spacer 1.22|1046347|33|NZ_CP022139|PILER-CR matches to GU323318 (Enterobacteria phage CC31, complete genome) position: , mismatch: 9, identity: 0.727

gaaaaactgacgtggtttgaacgcagggtgctg	CRISPR spacer
tcatagatgacgttgtttgaacgcatggtgcga	Protospacer
  * *. ****** *********** ***** .

170. spacer 1.30|1046835|33|NZ_CP022139|PILER-CR matches to MH884512 (Bacillus phage vB_BpsS-140, complete genome) position: , mismatch: 9, identity: 0.727

gtgtccgattattttatcgctatttgtgaaact	CRISPR spacer
atggaagattattttattgctattggtgaaggc	Protospacer
.**   ***********.****** *****. .

171. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_047733 (Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

172. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to JF974289 (Synechococcus phage S-RIM8 A.HR3, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

173. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK493323 (Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

174. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK493325 (Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

175. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK493322 (Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

176. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX349288 (Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

177. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_020486 (Synechococcus phage S-RIM8 A.HR1, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

178. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX349286 (Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

179. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to HQ317385 (Synechococcus phage S-RIM8 A.HR5, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

180. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK493324 (Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

181. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX349290 (Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

182. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX349285 (Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

183. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX349287 (Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

184. spacer 1.36|1045249|32|NZ_CP022139|CRISPRCasFinder,CRT matches to JF974293 (Cyanophage KBS-M-1A genomic sequence) position: , mismatch: 9, identity: 0.719

ccttcatgttcgatgataactgttttattact	CRISPR spacer
atacaatcttcgatgataacggttttattcat	Protospacer
 . . ** ************ ********  *

185. spacer 1.51|1046165|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 9, identity: 0.719

ggaaccgtcctcggggagatgttcgttatcgt	CRISPR spacer
ggaaccgtcctcggggagaggttatgaacgac	Protospacer
******************* ***    *. ..

186. spacer 2.13|1055338|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 9, identity: 0.719

aggatatttaaatatggtaactaaaatatatt	CRISPR spacer
ttattatttaaatatggtaaatcaaatttttc	Protospacer
  . **************** * **** * *.

187. spacer 2.13|1055338|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 9, identity: 0.719

aggatatttaaatatggtaactaaaatatatt	CRISPR spacer
ttattatttaaatatggtaaatcaaatttttc	Protospacer
  . **************** * **** * *.

188. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to JF974293 (Cyanophage KBS-M-1A genomic sequence) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

189. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to NC_047733 (Synechococcus phage S-RIM8 isolate RW_22_0300, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

190. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to JF974289 (Synechococcus phage S-RIM8 A.HR3, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

191. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to MK493323 (Synechococcus phage S-RIM8 isolate RW_03_0617, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

192. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to MK493325 (Synechococcus phage S-RIM8 isolate RW_62_0316, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

193. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to MK493322 (Synechococcus phage S-RIM8 isolate RW_01_0115_WH8101, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

194. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to KX349288 (Synechococcus phage S-RIM8 isolate RW_08_0711, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

195. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to NC_020486 (Synechococcus phage S-RIM8 A.HR1, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

196. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to KX349286 (Synechococcus phage S-RIM8 isolate RW_03_0807_WH8101, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

197. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to HQ317385 (Synechococcus phage S-RIM8 A.HR5, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

198. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to MK493324 (Synechococcus phage S-RIM8 isolate RW_22_0214, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

199. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to KX349290 (Synechococcus phage S-RIM8 isolate RW_25_1112, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

200. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to KX349285 (Synechococcus phage S-RIM8 isolate RW_01_0212_WH8101, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

201. spacer 1.4|1045248|33|NZ_CP022139|PILER-CR matches to KX349287 (Synechococcus phage S-RIM8 isolate RW_06_0613, complete genome) position: , mismatch: 10, identity: 0.697

gccttcatgttcgatgataactgttttattact	CRISPR spacer
catacaatcttcgatgataacggttttattcat	Protospacer
  . . ** ************ ********  *

202. spacer 1.35|1045188|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP033873 (Caulobacter sp. FWC26 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

caggcctaactcaacggcccgggcgaaatttt	CRISPR spacer
gtcgccgaactcaacggccagggcgaggtcgc	Protospacer
   *** ************ ******..*. .

203. spacer 1.38|1045371|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP041067 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_3, complete sequence) position: , mismatch: 10, identity: 0.688

gaattacgagagagaaatgaaaactttagtta	CRISPR spacer
gaataacgatagagaaatgaaaaaatggcgcc	Protospacer
**** **** *************  * .  .

204. spacer 1.52|1046226|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 10, identity: 0.688

acctataccgccagcgaactggctattgggct	CRISPR spacer
ctgtcgctcgccagcgaaccggcgattgggcc	Protospacer
 . *   .***********.*** *******.

205. spacer 1.58|1046592|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP025946 (Escherichia coli strain SCEC020023 plasmid p2_020023, complete sequence) position: , mismatch: 10, identity: 0.688

atgcgcctgtcttttttccacttcaggctcgg	CRISPR spacer
agtagcctgtattttttccacttgaggggaaa	Protospacer
*   ****** ************ ***   ..

206. spacer 1.60|1046714|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.688

tttacccgccgcgaggttctctttggtattga	CRISPR spacer
gacggccgccgcgagcttttctttggtaggaa	Protospacer
  .. ********** **.*********  .*

207. spacer 1.60|1046714|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.688

tttacccgccgcgaggttctctttggtattga	CRISPR spacer
gacggccgccgcgagcttttctttggtaggaa	Protospacer
  .. ********** **.*********  .*

208. spacer 2.13|1055338|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 10, identity: 0.688

aggatatttaaatatggtaactaaaatatatt	CRISPR spacer
aatgcatttgaatattgtaactaaaatagggg	Protospacer
*. ..****.***** ************ .

209. spacer 1.37|1045310|32|NZ_CP022139|CRISPRCasFinder,CRT matches to AP017993 (Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence) position: , mismatch: 11, identity: 0.656

caggtactctatcctgataatgttcttcagcc	CRISPR spacer
ggctggatctatcctgataatgatcttgagtt	Protospacer
 .   . *************** **** **..

210. spacer 1.60|1046714|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 11, identity: 0.656

tttacccgccgcgaggttctctttggtattga	CRISPR spacer
ttgacccgccgcgaagttctcttctcccgctt	Protospacer
** ***********.********.  .  .

211. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_048647 (UNVERIFIED: Klebsiella phage KNP2 genomic sequence) position: , mismatch: 11, identity: 0.656

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
attctgttttcgcagagctgcttggtgtaaca	Protospacer
  .  .. .*****************.* ***

212. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MK024806 (Proteus phage Mydo, complete genome) position: , mismatch: 11, identity: 0.656

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
attctgttttcgcagagctgcttggtgtaaca	Protospacer
  .  .. .*****************.* ***

213. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to KX452695 (UNVERIFIED: Klebsiella phage KPN2 genomic sequence) position: , mismatch: 11, identity: 0.656

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
attctgttttcgcagagctgcttggtgtaaca	Protospacer
  .  .. .*****************.* ***

214. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_048656 (Klebsiella phage vB_KpnM_BIS47, complete genome) position: , mismatch: 11, identity: 0.656

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
attctgttttcgcagagctgcttggtgtaaca	Protospacer
  .  .. .*****************.* ***

215. spacer 2.14|1055399|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NC_028659 (Klebsiella phage vB_KpnM_KB57, complete genome) position: , mismatch: 11, identity: 0.656

cgcaaacactcgcagagctgcttggtatcaca	CRISPR spacer
attctgttttcgcagagctgcttggtgtaaca	Protospacer
  .  .. .*****************.* ***

216. spacer 2.18|1055643|32|NZ_CP022139|CRISPRCasFinder,CRT matches to MN047793 (Xanthomonas phage Xoo-sp13, complete genome) position: , mismatch: 11, identity: 0.656

agggggatatgattattacatggattgattca	CRISPR spacer
caatccatatgattatcatatggattgataat	Protospacer
 ..   **********.*.**********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1205658 : 1219473

Enterobacteria_phage(88.89%)

integrase

attL 1214873:1214888|attR 1222087:1222102

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080225851.1\|1205658_1206225_-	flagellar phase variation DNA invertase Hin	A0A0A7NPV4	Enterobacteria_phage	1.6e-69	72.8
WP_080225852.1\|1206316_1207804_+	flagellin FliC	NA	NA	NA	NA
WP_080225853.1\|1207871_1208411_+	phase 1 flagellin gene repressor FljA	NA	NA	NA	NA
WP_080225854.1\|1209202_1211536_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.4
WP_000743150.1\|1211550_1211871_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_001145746.1\|1211867_1212128_-	hypothetical protein	NA	NA	NA	NA
WP_000459283.1\|1212201_1212651_-	hypothetical protein	Q7M298	Enterobacteria_phage	1.5e-43	70.5
WP_000556707.1\|1212643_1212943_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	6.1e-28	70.7
WP_001750323.1\|1212932_1213535_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.2e-44	70.8
WP_000149859.1\|1214345_1215083_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.7e-76	62.3
1214873:1214888	attL	NA	NA	NA	NA
WP_000984203.1\|1215079_1215325_+	transcriptional regulator	Q7M294	Enterobacteria_phage	5.3e-30	75.3
WP_080225855.1\|1215341_1215908_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.2e-55	62.2
WP_077918899.1\|1216441_1217092_-	hypothetical protein	NA	NA	NA	NA
WP_046093961.1\|1217102_1217897_-	hypothetical protein	NA	NA	NA	NA
WP_046093960.1\|1218261_1219473_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	2.8e-108	49.9
1222087:1222102	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1644607 : 1661662

Salmonella_phage(47.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080226949.1\|1644607_1645189_-	DNA-binding protein	I6R977	Salmonella_phage	1.0e-31	59.3
WP_080226950.1\|1645668_1646847_-	recombinase	A0A2D1GN00	Marinobacter_phage	1.5e-32	30.8
WP_031605603.1\|1646852_1647059_-	hypothetical protein	NA	NA	NA	NA
WP_080226951.1\|1647123_1648929_-	hypothetical protein	A0A0U2I1R6	Escherichia_phage	4.8e-11	25.4
WP_080226952.1\|1648939_1649161_-	hypothetical protein	NA	NA	NA	NA
WP_080226953.1\|1649235_1649424_-	DUF1482 family protein	NA	NA	NA	NA
WP_080226954.1\|1649420_1649624_-	hypothetical protein	NA	NA	NA	NA
WP_157698293.1\|1649771_1650086_+	hypothetical protein	NA	NA	NA	NA
WP_080226956.1\|1650297_1650453_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.4e-07	57.4
WP_088744826.1\|1650668_1650998_-	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	1.3e-15	43.4
WP_080227579.1\|1651166_1651601_+	hypothetical protein	A0A0M4QX15	Salmonella_phage	3.4e-19	61.0
WP_080227578.1\|1651613_1652786_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	5.3e-35	52.9
WP_080227577.1\|1652739_1653186_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.6e-45	57.2
WP_080227576.1\|1653199_1653469_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_141030866.1\|1653455_1653674_+	hypothetical protein	NA	NA	NA	NA
WP_080227575.1\|1653670_1654093_+	hypothetical protein	A0A0N6WGF1	Salmonella_phage	2.0e-40	67.7
WP_080227574.1\|1654089_1654680_+	hypothetical protein	M1F3E2	Salmonella_phage	4.5e-43	48.9
WP_080227573.1\|1654676_1655078_+	ParB/RepB/Spo0J family partition protein	S4TTI6	Salmonella_phage	2.7e-71	98.5
WP_080227571.1\|1655074_1655395_+	hypothetical protein	H6WRY0	Salmonella_phage	5.3e-22	58.3
WP_001749881.1\|1655395_1655599_+	hypothetical protein	NA	NA	NA	NA
WP_080227581.1\|1655602_1655848_+	hypothetical protein	Q5G8U9	Enterobacteria_phage	3.0e-33	88.6
WP_080227570.1\|1655847_1656321_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	7.3e-68	78.8
WP_080227569.1\|1656352_1656628_+	hypothetical protein	I6R982	Salmonella_phage	8.8e-50	95.6
WP_080227567.1\|1656615_1656864_+	hypothetical protein	A0A0N7CG33	Salmonella_phage	5.9e-37	85.4
WP_088744657.1\|1657209_1657839_+	hypothetical protein	NA	NA	NA	NA
WP_157698294.1\|1658007_1658172_+	hypothetical protein	NA	NA	NA	NA
WP_080227564.1\|1658284_1658575_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	4.1e-21	49.5
WP_080227563.1\|1658574_1658934_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	4.3e-36	57.4
WP_088744658.1\|1658930_1660331_+	DNA cytosine methyltransferase	A0A1B0V7P0	Salmonella_phage	1.7e-128	52.1
WP_088744827.1\|1660330_1660936_+	hypothetical protein	H9C175	Pectobacterium_phage	1.7e-69	60.5
WP_143540051.1\|1660942_1661662_-	hypothetical protein	S5W9D9	Leptospira_phage	2.5e-19	28.7

DBSCAN-SWA_3

1665087 : 1687441

Salmonella_phage(31.82%)

head,terminase,portal,capsid,plate,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080227851.1\|1665087_1665513_+	lysozyme	A0A0S2SYD0	Pseudomonas_phage	7.5e-32	51.4
WP_080227852.1\|1665808_1666327_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	1.7e-62	68.0
WP_080227853.1\|1666356_1666548_+	hypothetical protein	NA	NA	NA	NA
WP_080227854.1\|1666602_1667037_-	hypothetical protein	NA	NA	NA	NA
WP_080227855.1\|1667159_1667396_+	hypothetical protein	NA	NA	NA	NA
WP_080227856.1\|1667395_1667755_+	HNH endonuclease	Q8SBD7	Shigella_phage	8.1e-27	55.9
WP_080227857.1\|1667909_1668380_+\|terminase	phage terminase small subunit P27 family	Q8W632	Enterobacteria_phage	2.0e-73	83.3
WP_088744661.1\|1668376_1670107_+\|terminase	terminase large subunit	Q8W631	Enterobacteria_phage	3.0e-305	86.6
WP_080227000.1\|1670121_1671342_+\|portal	phage portal protein	Q8W629	Enterobacteria_phage	2.0e-173	70.9
WP_080226998.1\|1671319_1671970_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	1.6e-86	71.3
WP_080226999.1\|1671980_1673189_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	2.2e-148	64.0
WP_080226997.1\|1673230_1673551_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	1.8e-22	50.5
WP_080226996.1\|1673547_1673979_+\|head	phage head closure protein	NA	NA	NA	NA
WP_080226995.1\|1673962_1674505_+	hypothetical protein	Q8HAC8	Salmonella_phage	3.8e-44	54.5
WP_080226994.1\|1674504_1675080_+	hypothetical protein	A0A192Y5U4	Salmonella_phage	3.0e-55	55.9
WP_080226993.1\|1675091_1676597_+\|tail	phage tail protein	Q8HAC5	Salmonella_phage	1.5e-154	56.7
WP_080226992.1\|1676596_1676953_+\|tail	phage tail protein	U5P076	Shigella_phage	1.4e-44	72.0
WP_080226991.1\|1676949_1677240_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_080226990.1\|1677375_1679169_+\|tail	phage tail tape measure protein	Q8W620	Enterobacteria_phage	8.5e-101	38.9
WP_080226989.1\|1679203_1680499_+	hypothetical protein	Q8SBG8	Shigella_phage	3.5e-96	43.5
WP_080226988.1\|1680495_1681581_+\|plate	baseplate protein	U5P0H6	Shigella_phage	8.2e-99	52.2
WP_080226987.1\|1681580_1682369_+\|plate	phage baseplate assembly protein V	Q8W617	Enterobacteria_phage	4.0e-26	54.8
WP_080226986.1\|1682365_1682782_+	hypothetical protein	A0A192Y6D0	Salmonella_phage	5.6e-40	57.8
WP_080226985.1\|1682774_1683836_+\|plate	baseplate J/gp47 family protein	Q8W615	Enterobacteria_phage	7.5e-113	56.7
WP_080226984.1\|1683823_1684456_+	DUF2313 domain-containing protein	O22003	Shigella_phage	8.5e-56	52.3
WP_080226983.1\|1684418_1685234_+	hypothetical protein	U5P0I1	Shigella_phage	1.8e-18	57.5
WP_080226982.1\|1685230_1685815_+	hypothetical protein	NA	NA	NA	NA
WP_080226981.1\|1685893_1687441_+	hypothetical protein	A0A1L5C071	Aquamicrobium_phage	1.2e-07	55.4

DBSCAN-SWA_4

1762249 : 1770816

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080227484.1\|1762249_1763197_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	4.0e-09	27.4
WP_080227485.1\|1763180_1763912_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1763892_1764000_-	protein YohO	NA	NA	NA	NA
WP_080227486.1\|1764059_1764791_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.5e-99	86.4
WP_080227487.1\|1765013_1766699_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.9e-276	90.4
WP_080227488.1\|1766695_1767415_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_080227489.1\|1767461_1767932_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	8.0e-75	90.4
WP_080227490.1\|1768083_1768542_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	2.2e-53	73.2
WP_080226842.1\|1768782_1770816_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	3.6e-55	27.6

DBSCAN-SWA_5

2529643 : 2576488

Burkholderia_phage(24.39%)

integrase,terminase,tail

attL 2549377:2549393|attR 2584394:2584410

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088744714.1\|2529643_2531269_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	4.8e-10	35.5
WP_080226530.1\|2531438_2532557_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	2.6e-31	29.5
WP_080226531.1\|2532588_2532864_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_157698300.1\|2533236_2533608_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_080226533.1\|2533610_2534726_-	hypothetical protein	A0A2H4P6V2	Pseudomonas_phage	7.1e-05	35.7
WP_080226534.1\|2534732_2535977_-	hypothetical protein	Q6IWQ6	Burkholderia_phage	2.8e-18	40.3
WP_080226535.1\|2535973_2536654_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	1.5e-45	44.3
WP_157698301.1\|2536650_2537847_-	hypothetical protein	Q6IWQ3	Burkholderia_phage	8.6e-73	45.2
WP_080226537.1\|2537839_2538184_-	hypothetical protein	NA	NA	NA	NA
WP_080226538.1\|2538193_2538925_-	hypothetical protein	Q6IWQ1	Burkholderia_phage	6.4e-47	54.3
WP_080226539.1\|2538917_2539742_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	2.7e-54	43.8
WP_141030821.1\|2539738_2540041_-	hypothetical protein	NA	NA	NA	NA
WP_080226541.1\|2540037_2540583_-	hypothetical protein	Q6IWP8	Burkholderia_phage	6.5e-20	38.1
WP_080226542.1\|2540582_2542238_-	hypothetical protein	A0A1W6JPF2	Morganella_phage	4.1e-17	23.9
WP_080226543.1\|2542299_2542989_-	hypothetical protein	NA	NA	NA	NA
WP_080226544.1\|2543245_2543689_-	hypothetical protein	Q6IWV4	Burkholderia_phage	2.3e-31	55.4
WP_080226545.1\|2543688_2544132_-	hypothetical protein	I7ATP4	Escherichia_phage	1.2e-35	52.4
WP_080226546.1\|2544141_2545683_-	DUF3383 domain-containing protein	I7B2P4	Escherichia_phage	1.7e-94	40.0
WP_080226547.1\|2545685_2546225_-	hypothetical protein	NA	NA	NA	NA
WP_080226548.1\|2546217_2546586_-	hypothetical protein	A0A0F6YPT0	Pseudomonas_phage	8.8e-21	39.3
WP_088744715.1\|2546582_2547029_-	hypothetical protein	NA	NA	NA	NA
WP_080226550.1\|2547058_2547511_-	DUF4054 domain-containing protein	A0A0U2CI04	Pseudomonas_phage	1.2e-22	42.9
WP_080226551.1\|2547513_2547891_-	hypothetical protein	Q6IWU7	Burkholderia_phage	8.2e-14	37.7
WP_080226552.1\|2547905_2549021_-	DUF2184 domain-containing protein	I6ZXX2	Escherichia_phage	4.7e-89	47.5
WP_080226553.1\|2549032_2549527_-	hypothetical protein	NA	NA	NA	NA
2549377:2549393	attL	NA	NA	NA	NA
WP_080226554.1\|2549526_2550711_-	DUF2213 domain-containing protein	A0A2H5BG39	Pseudoalteromonas_phage	5.2e-46	37.0
WP_157698302.1\|2550707_2551580_-	hypothetical protein	Q6IWU3	Burkholderia_phage	6.0e-60	41.3
WP_080226556.1\|2551494_2553033_-	DUF1073 domain-containing protein	Q6IWU2	Burkholderia_phage	4.6e-111	48.2
WP_080226557.1\|2553032_2554667_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	4.4e-229	69.7
WP_080226558.1\|2554666_2555686_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	7.1e-60	54.8
WP_088744831.1\|2555685_2555937_-	hypothetical protein	NA	NA	NA	NA
WP_080226560.1\|2555936_2556806_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	6.2e-81	53.3
WP_080226561.1\|2556798_2557590_-	transcriptional regulator	R4TG31	Halovirus	1.0e-50	45.2
WP_080226562.1\|2557789_2558038_-	hypothetical protein	NA	NA	NA	NA
WP_088744832.1\|2558141_2558333_-	hypothetical protein	NA	NA	NA	NA
WP_080228015.1\|2558473_2558866_-	M15 family metallopeptidase	A0A1P8DTR0	Salmonella_phage	5.1e-51	72.4
WP_088744716.1\|2559234_2559849_+	DUF3828 domain-containing protein	NA	NA	NA	NA
WP_157698303.1\|2559939_2560089_-	hypothetical protein	NA	NA	NA	NA
WP_088744717.1\|2560097_2560406_-	hypothetical protein	NA	NA	NA	NA
WP_157698304.1\|2560632_2560788_-	hypothetical protein	NA	NA	NA	NA
WP_080228001.1\|2560784_2561207_-	tellurite resistance TerB family protein	Q71TK7	Escherichia_phage	2.1e-50	77.8
WP_080228002.1\|2561579_2561870_+	hypothetical protein	NA	NA	NA	NA
WP_080227984.1\|2562186_2562762_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	3.0e-55	59.0
WP_080227983.1\|2562758_2563055_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	5.6e-34	65.3
WP_080227982.1\|2563051_2563645_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.8e-47	47.2
WP_080227985.1\|2563707_2563908_-	hypothetical protein	NA	NA	NA	NA
WP_080227566.1\|2564073_2564703_-	hypothetical protein	NA	NA	NA	NA
WP_080228011.1\|2565416_2565674_-	hypothetical protein	A0A192Y5W0	Salmonella_phage	6.3e-42	98.8
WP_115276863.1\|2565675_2566164_-	hypothetical protein	A0A1V0E5L5	Salmonella_phage	1.6e-38	92.1
WP_001749881.1\|2566167_2566371_-	hypothetical protein	NA	NA	NA	NA
WP_088744833.1\|2566371_2566587_-	hypothetical protein	Q5G8U8	Enterobacteria_phage	5.9e-17	74.5
WP_088744834.1\|2567831_2568650_-	replication protein	V5URT9	Shigella_phage	8.2e-51	66.4
WP_080226960.1\|2568678_2569161_-	hypothetical protein	NA	NA	NA	NA
WP_080226959.1\|2569138_2569369_-	transcriptional regulator	NA	NA	NA	NA
WP_088744835.1\|2569465_2569858_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.2e-30	54.5
WP_080226958.1\|2569879_2570254_+	hypothetical protein	NA	NA	NA	NA
WP_080226957.1\|2570246_2570630_+	hypothetical protein	A0A2H4FNB7	Salmonella_phage	4.9e-14	47.8
WP_080226956.1\|2570841_2570997_+	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	1.4e-07	57.4
WP_157698305.1\|2571017_2571155_+	hypothetical protein	NA	NA	NA	NA
WP_079941873.1\|2571166_2571373_+	cell division inhibitor protein	I6PBM9	Cronobacter_phage	7.4e-09	41.2
WP_080226504.1\|2571437_2571734_+	hypothetical protein	NA	NA	NA	NA
WP_080226503.1\|2571744_2573994_+	hypothetical protein	H9C157	Pectobacterium_phage	5.5e-105	35.1
WP_080226507.1\|2574020_2574485_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.5e-36	53.5
WP_080226502.1\|2574499_2574937_+	hypothetical protein	NA	NA	NA	NA
WP_080226501.1\|2575004_2575217_+	hypothetical protein	A0A0U2RY08	Escherichia_phage	8.4e-16	54.9
WP_088744718.1\|2575213_2576488_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	8.4e-127	55.0
2584394:2584410	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2961781 : 2969415

Morganella_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080226702.1\|2961781_2963212_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	8.0e-102	56.6
WP_080226703.1\|2963285_2963981_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	1.8e-06	26.6
WP_080226704.1\|2964105_2964372_-	hypothetical protein	NA	NA	NA	NA
WP_080226706.1\|2965022_2966216_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.1e-112	57.8
WP_024131163.1\|2966457_2966646_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2966656_2966869_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_080226708.1\|2967210_2968479_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.9e-229	92.4
WP_080226709.1\|2968481_2968901_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.2e-36	59.8
WP_080226710.1\|2969220_2969415_-	hypothetical protein	A0A0M4RTP2	Salmonella_phage	8.2e-18	51.5

DBSCAN-SWA_7

3648067 : 3686957

Enterobacteria_phage(28.57%)

transposase,integrase,plate

attL 3640457:3640472|attR 3665537:3665552

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3640457:3640472	attL	NA	NA	NA	NA
WP_021553258.1\|3648067_3649282_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.9e-129	55.0
WP_080224984.1\|3649648_3650899_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-97	46.5
WP_061376311.1\|3650910_3652014_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	9.0e-61	39.8
WP_080224983.1\|3652296_3653349_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	3.9e-114	59.0
WP_088744776.1\|3653450_3653852_-	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_080224982.1\|3653909_3655154_-	esterase FrsA	NA	NA	NA	NA
WP_001292018.1\|3655242_3655701_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_080224981.1\|3655949_3657407_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_080224980.1\|3657666_3658722_-	DNA polymerase IV	NA	NA	NA	NA
WP_080224979.1\|3658972_3659713_+	murein L,D-transpeptidase	NA	NA	NA	NA
WP_080224978.1\|3659683_3660451_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_000284051.1\|3660663_3661242_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.3e-13	30.8
WP_080224977.1\|3661481_3663926_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_080224976.1\|3664034_3664802_+	amidohydrolase	NA	NA	NA	NA
WP_080224975.1\|3664963_3665371_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_080224973.1\|3665612_3668180_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
3665537:3665552	attR	NA	NA	NA	NA
WP_080224972.1\|3668498_3669218_+	adhesin/invasin protein PagN	NA	NA	NA	NA
WP_088744777.1\|3671483_3672178_-\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	1.6e-119	86.6
WP_088744839.1\|3672304_3672700_-	hypothetical protein	NA	NA	NA	NA
WP_080224970.1\|3672787_3674896_-	hypothetical protein	NA	NA	NA	NA
WP_088744778.1\|3674907_3677037_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.9e-21	24.2
WP_001142963.1\|3677275_3677794_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_080226037.1\|3678485_3678983_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_080226038.1\|3679006_3680491_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_088744840.1\|3680493_3680919_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_080226040.1\|3680923_3682765_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_080226041.1\|3682728_3683778_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_080226042.1\|3683782_3685078_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_080226043.1\|3685074_3685608_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_080226044.1\|3685610_3686957_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_8

4453364 : 4500337

Burkholderia_phage(47.06%)

tRNA,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080225211.1\|4453364_4454363_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_080225210.1\|4454450_4455761_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_023231879.1\|4456007_4456523_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4456620_4456830_-	CsbD family protein	NA	NA	NA	NA
WP_080225209.1\|4456961_4458287_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4458470_4459079_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4459187_4459556_-	diacylglycerol kinase	NA	NA	NA	NA
WP_080225208.1\|4459726_4462147_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_080225207.1\|4462225_4463272_-	pilus assembly protein	NA	NA	NA	NA
WP_079775533.1\|4463268_4464006_-	molecular chaperone	NA	NA	NA	NA
WP_080225206.1\|4464021_4466553_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_023184580.1\|4466637_4467210_-	fimbrial-like protein	NA	NA	NA	NA
WP_080225205.1\|4468019_4468892_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_080225204.1\|4468905_4469403_-	chorismate lyase	NA	NA	NA	NA
WP_080225203.1\|4469582_4470500_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973642.1\|4470662_4472021_-	maltoporin	NA	NA	NA	NA
WP_000179169.1\|4472118_4473228_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_080225202.1\|4473589_4474780_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_080225201.1\|4474909_4476454_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252081.1\|4476468_4477359_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_080225200.1\|4477702_4479178_+	D-xylose transporter XylE	NA	NA	NA	NA
WP_080225199.1\|4479224_4479635_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_080225198.1\|4479776_4481873_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_080225197.1\|4481872_4482610_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_080225196.1\|4482606_4483245_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_023165043.1\|4483308_4483551_-	hypothetical protein	NA	NA	NA	NA
WP_080225195.1\|4483993_4485643_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_080225194.1\|4486031_4487381_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4487507_4487855_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_023184600.1\|4488430_4488718_+	hypothetical protein	Q6QIC8	Burkholderia_phage	1.8e-16	49.1
WP_080225193.1\|4488720_4489326_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	4.3e-57	56.4
WP_080225192.1\|4489338_4489653_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_080225191.1\|4489812_4490268_+	hypothetical protein	NA	NA	NA	NA
WP_080225190.1\|4490264_4490462_+	hypothetical protein	Q6QIB1	Burkholderia_phage	1.1e-06	52.9
WP_080225189.1\|4490451_4491867_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	5.7e-185	69.2
WP_000907500.1\|4491866_4492391_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	4.0e-67	69.0
WP_023177420.1\|4492442_4492760_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001728452.1\|4492719_4492848_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_080225188.1\|4492941_4495227_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	2.3e-66	28.3
WP_080225187.1\|4495226_4496180_+	chemotaxis protein	A4JWL1	Burkholderia_virus	1.2e-37	52.3
WP_023177426.1\|4496179_4496389_+	phage Tail protein X	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_080225186.1\|4496376_4497417_+	phage late control D family protein	A4JWL3	Burkholderia_virus	1.0e-74	46.2
WP_080225185.1\|4497426_4498149_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_001093500.1\|4498246_4498606_+	hypothetical protein	Q6QIA0	Burkholderia_phage	1.4e-34	64.2
WP_080225184.1\|4498596_4499712_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.1e-101	52.5
WP_080225183.1\|4499704_4500337_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	2.3e-24	56.4

Anti-CRISPR protein detection

Acr_ID: NZ_CP022139.1|WP_080227991.1|1662852_1663044_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP022139.1|WP_080226504.1|2571437_2571734_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP022139.1|WP_080227991.1|1662852_1663044_-|hypothetical-protein

1662852_1663044_-

63 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|68	0.5555555555555556	1	1.0

NZ_CP022139.1|WP_080226504.1|2571437_2571734_+|hypothetical-protein

2571437_2571734_+

98 aa aa

2529643-2576488

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP022139_2	Orphan	2.1\|1055154\|33\|NZ_CP022139\|PILER-CR	1055154-1055186	33	2562345-2562377	0
NZ_CP022139_2	Orphan	2.10\|1055155\|32\|NZ_CP022139\|CRISPRCasFinder,CRT	1055155-1055186	32	2562346-2562377	0

1. spacer 2.1|1055154|33|NZ_CP022139|PILER-CR matches to NZ_CP022139 position: 2562345-2562377, mismatch: 0

gatcttgcgccaatgcttttttactcttccctt	CRISPR spacer
gatcttgcgccaatgcttttttactcttccctt	Protospacer
*********************************

2. spacer 2.10|1055155|32|NZ_CP022139|CRISPRCasFinder,CRT matches to NZ_CP022139 position: 2562346-2562377, mismatch: 0

atcttgcgccaatgcttttttactcttccctt	CRISPR spacer
atcttgcgccaatgcttttttactcttccctt	Protospacer
********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022141

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP022140

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP022139

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information