CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022073	Citrobacter koseri strain FDAARGOS_287 chromosome, complete genome	20 crisprs	DEDDh,cas3,PD-DExK,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	0	17	6	0
NZ_CP022075	Citrobacter koseri strain FDAARGOS_287 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022073_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_1

682452-682530

Orphan

Consensus_repeat	Method
GCTTATCGGGCCTACAAATGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_1

>merge|NZ_CP022073|1|682452-682530|CRISPRCasFinder
GCTTATCGGGCCTACAAATGATGCAAATCCCGGCTGATAATGCCCGGTGGCGCTCCGCTTATCGGGCCTACAAACGATG

>NZ_CP022073|1|1|682452-682530|CRISPRCasFinder
GCTTATCGGGCCTACAAATGATG	CAAATCCCGGCTGATAATGCCCGGTGGCGCTCC
GCTTATCGGGCCTACAAACGATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058668568.1\|691906_692413_-\|secA-regulator-SecM	unknown	unknown	gnl\|CDD\|235088
NZ_CP022073.1\|WP_049008869.1\|680877_681441_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP022073.1\|WP_012134054.1\|680026_680881_-\|beta-lactamase-regulator-AmpE	unknown	unknown	gnl\|CDD\|374997
NZ_CP022073.1\|WP_058668570.1\|687050_687671_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP022073.1\|WP_012134051.1\|676050_677424_+\|aromatic-amino-acid-transporter-AroP	unknown	unknown	gnl\|CDD\|182324
NZ_CP022073.1\|WP_047458901.1\|682722_683160_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP022073.1\|WP_047458916.1\|689139_691845_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP022073.1\|WP_058668572.1\|684545_685748_+\|protein-transport-protein-HofC	unknown	unknown	gnl\|CDD\|182559
NZ_CP022073.1\|WP_058668573.1\|683170_684556_+\|type-II-secretion-system-protein-GspE	unknown	unknown	gnl\|CDD\|236694
NZ_CP022073.1\|WP_012134049.1\|674746_675511_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP022073.1\|WP_058668569.1\|688691_689081_-\|8-oxo-dGTP-diphosphatase-MutT	unknown	unknown	gnl\|CDD\|182721
NZ_CP022073.1\|WP_058668574.1\|678985_679936_+\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|226449
NZ_CP022073.1\|WP_012134063.1\|687670_688414_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|226948
NZ_CP022073.1\|WP_058668575.1\|677579_678986_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_CP022073.1\|WP_047463778.1\|668385_669810_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP022073.1\|WP_012134048.1\|671919_674583_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP022073.1\|WP_047458910.1\|688423_688618_+\|DNA-gyrase-inhibitor-YacG	unknown	unknown	gnl\|CDD\|234754
NZ_CP022073.1\|WP_058668576.1\|670012_671905_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP022073.1\|WP_058668571.1\|685781_686825_-\|GMP-reductase	unknown	unknown	gnl\|CDD\|235343
NZ_CP022073.1\|WP_012134056.1\|681528_682422_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|181612

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058668568.1\|691906_692413_-\|secA-regulator-SecM	gnl\|CDD\|235088	PRK02943, PRK02943, secA regulator SecM.	6.65455e-102
NZ_CP022073.1\|WP_049008869.1\|680877_681441_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	2.18668e-139
NZ_CP022073.1\|WP_012134054.1\|680026_680881_-\|beta-lactamase-regulator-AmpE	gnl\|CDD\|374997	pfam17113, AmpE, Regulatory signalling modulator protein AmpE. AmpE is a family of bacterial regulatory proteins. AmpE in conjunction with AmpD sense the effect of beta-lactam on peptidoglycan synthesis and relay this signal to AmpR. AmpR regulates the production of beta-lactamase.	0
NZ_CP022073.1\|WP_058668570.1\|687050_687671_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	6.96783e-98
NZ_CP022073.1\|WP_012134051.1\|676050_677424_+\|aromatic-amino-acid-transporter-AroP	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NZ_CP022073.1\|WP_047458901.1\|682722_683160_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	4.42498e-103
NZ_CP022073.1\|WP_047458916.1\|689139_691845_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP022073.1\|WP_058668572.1\|684545_685748_+\|protein-transport-protein-HofC	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	0
NZ_CP022073.1\|WP_058668573.1\|683170_684556_+\|type-II-secretion-system-protein-GspE	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	0
NZ_CP022073.1\|WP_012134049.1\|674746_675511_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	3.35038e-165
NZ_CP022073.1\|WP_058668569.1\|688691_689081_-\|8-oxo-dGTP-diphosphatase-MutT	gnl\|CDD\|182721	PRK10776, PRK10776, 8-oxo-dGTP diphosphatase MutT.	2.30969e-89
NZ_CP022073.1\|WP_058668574.1\|678985_679936_+\|family-43-glycosylhydrolase	gnl\|CDD\|226449	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only].	0
NZ_CP022073.1\|WP_012134063.1\|687670_688414_+\|cell-division-protein-ZapD	gnl\|CDD\|226948	COG4582, COG4582, Uncharacterized protein conserved in bacteria [Function unknown].	6.89616e-148
NZ_CP022073.1\|WP_058668575.1\|677579_678986_+\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	1.39908e-180
NZ_CP022073.1\|WP_047463778.1\|668385_669810_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP022073.1\|WP_012134048.1\|671919_674583_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP022073.1\|WP_047458910.1\|688423_688618_+\|DNA-gyrase-inhibitor-YacG	gnl\|CDD\|234754	PRK00418, PRK00418, DNA gyrase inhibitor YacG.	6.68399e-36
NZ_CP022073.1\|WP_058668576.1\|670012_671905_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP022073.1\|WP_058668571.1\|685781_686825_-\|GMP-reductase	gnl\|CDD\|235343	PRK05096, PRK05096, guanosine 5'-monophosphate oxidoreductase; Provisional.	0
NZ_CP022073.1\|WP_012134056.1\|681528_682422_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|181612	PRK09016, PRK09016, carboxylating nicotinate-nucleotide diphosphorylase.	0

>NZ_CP022073.1|WP_012134056.1|681528_682422_+|carboxylating-nicotinate-nucleotide-diphosphorylase
MPPRRYNPDYRRDALLERINLDIPTAVAQALREDLGGEVDANNDITAQLLPENTRSHATVITREDGVFCGKRWVEEVFIQLAGDDVSITWRVQDGDSIKANQPLFELDGPSRILLTGERTALNFVQTLSGVASEVRKYVDLLAGTKTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFETDQMREAVKRTNGQARLEVSGNVTDETLREFAETGVDFISVGALTKHVRALDLSMRFR
>NZ_CP022073.1|WP_049008869.1|680877_681441_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MLLDKGWLAEARRVPSPHFDCRPDDETPSLLVVHNISLPPGEFGGPWIDALFTGTLDPAAHPFFAEIVHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSNYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRTLIALYPAIADNMTGHCNIAPERKTDPGPSFDWAKFRALVTASSHKEMT
>NZ_CP022073.1|WP_012134054.1|680026_680881_-|beta-lactamase-regulator-AmpE
MTLFTTLLVLIVERLFKLGEHWHLDHRLEVLFRRTTHFSMVRTLGMTIVAMAVTFLLLRALEGLLFNAPTLVVWILIGVLCIGAGKVRLHYHAYLNAASRNDAHAREAMANELTLIHGVPPDCNEREFLRELQNALLWINFRFYLAPLFWFIVGGPWGPVTLVGYAFLRAWQSWLARYQTPHQRLQSGIDAILHVLDWIPVRLAGVVYALLGHGEKALPAWFVSLADLRTSQYQVLTRLAQFSLAREPHTDKVETPKAAVSMAKKTSLAVVVAIAFLTIYGALV
>NZ_CP022073.1|WP_058668574.1|678985_679936_+|family-43-glycosylhydrolase
MQNWPNPFIEQRADPFILRDGNHYYFIASVPEYDRLEIRRANSLENLRTASPVVVWRKPESGPMCELIWAPEIHRIGGKWYIYFAAAHTQALDKLGMFQHRMFVLECTDADPLSGVWEEKGQVKTPFDTFALDATTFSHQGKQWYLWAQKAPDIAGNSNIYLAGLENPWTIKGAPVMLSKPEYDWECRGFRVNEGPAVITHGDKLFISYSASATDENYCMGLLWIDMHADPQNPANWHKSPRPVFTTSNENRQYGPGHNSFTQTPEGDDVLVYHARNYTEIEGDPLYDPNRHTRLKLIRWDENGMPDFGIPPADTV
>NZ_CP022073.1|WP_058668575.1|677579_678986_+|MFS-transporter
MEKGKLSIKEKIGYGMGDAGCNIIFGAIMLFVNYFYTDIFGLAPALVGVLLLSVRVIDAVTDPIMGAIADRTQSKYGRFRPWLLWVAFPYALFSILMFTTPEWTYNSKVIYAFVTYFLLSITYTAINIPYCSLGGVITNDPQERVACQSYRFVLVGIATLLLSLTLLPMVEWFGGDNKAKGYQMAMTVLAIIGMCMFLFCFATVRERIRPAVPTHDDMKNDFKDVWKNDQWVRILLLTLCNVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVVGMMIGSMLAKVLTDRWCKLKVFFWTNIALALFSCAFYFFDPKATTLIVVLYFLLNILHQIPSPLHWSLMADVDDYGEWKTGKRITGISFSGNLFFLKLGLAIAGAMVGFLLSWYGYDAGAKAQSNTAIGGIVLLFTVIPGVGYLITAGVVRLLKVDRELMKQIQKDLEKRRANYRELNDDPQFNVAETVRKA
>NZ_CP022073.1|WP_012134051.1|676050_677424_+|aromatic-amino-acid-transporter-AroP
MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGGFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWWPEIPTWVSAAAFFVLINAINLTNVKVFGEMEFWFAIIKVIAVVAMILFGGWLLFSGNGGPQATVRNLWEQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLLPWTRVTADTSPFVLIFHELGDTLVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKVFLSVDKRGVPVNTILVSALVTALCVLINYMAPDSAFGLLMALVVSALVINWAMISLAHIKFRRAKQQQGVKTRFPALFYPLGNWVCLLFMAAVLVIMLMTPGMAISVYLIPVWIVILGVGYLCKQKTAKTVKAH
>NZ_CP022073.1|WP_012134049.1|674746_675511_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQFDLLETRHALEGIAAYYAALRSTDEDKTRIRELHHAIELAQQSGDLDAESDAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYARREMLPLVSSHRTRIFEAIIAGNPIDAREASHRHLAFIEEILLDRSREESRRERALRRLEQRKN
>NZ_CP022073.1|WP_012134048.1|671919_674583_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLSEARKGGVKVAAGAGASNYVNTIAVEDEPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATVYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTEEQMDNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFIINCNLQRLDGPVTGNGKIVNELEGIFDGAGWNVIKVMWGGRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKVYAALKKAQETKGKATVILAHTIKGYGMGDTAEGKNIAHQVKKMNMDGVRYVRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPTLEDFGALLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGSSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPSYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETLEGKKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIDKKVVAEAITKFNIDADKVNPRLA
>NZ_CP022073.1|WP_058668576.1|670012_671905_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MAIEINVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGVVKEIKVSVGDKTATGALIMIFDSADGAADAAPAPAEEKKEAAPATAPAAAAAKDVHVPDIGGDEVEVTEILVKVGDTVAAEQSLITVEGDKASMEVPAPFAGTVKEIKVNAGDKVSTGSLIMVFEVAGAAPAAAPAQAAAPAAAAPAAAAGAKDVNVPDIGGDEVEVTEVMVKVGDKVEAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVSTGSLIMVFEVEGAAPAAAPAAAAPAPAAAPAQAAKPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKDAIKRAESAPAGATGGSLPGLLPWPKVDFSKFGEVEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITDLEAFRKQQNAEAEKRKLDVKFTPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKSITELSRELTTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFTPRLMMPISLSFDHRVIDGADGARFITIINNTLSDIRRLVM
>NZ_CP022073.1|WP_047463778.1|668385_669810_-|dihydrolipoyl-dehydrogenase
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKSVPKRLLVMGGGIIGLEMGTVYHALGSEIDVVEMFDQVIPAADKDIVKVFTKRIGKKFNLMLETKVTAVEAKEDGIYVSMEGKKAPAEAQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
>NZ_CP022073.1|WP_047458901.1|682722_683160_+|prepilin-peptidase-dependent-pilin
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGIATCDASSNGIPSPTTTRYVSGMSIEKGVVMLTGQESLNGLSITMTPNWDNANGITGWTRSCNIQSDSALQQACEDVFRFDAS
>NZ_CP022073.1|WP_058668573.1|683170_684556_+|type-II-secretion-system-protein-GspE
MNITQLTALCLRHQGILLDADNEVVHVAVVDSPSHELLDALHFATTKRIDIVCWTRQQMEGHMHKPRKMLPAVIADDSRTAAELLQQTLESALAKRASDIHIEPAENHYRIRLRVDGVLHALPGVSSVTGAALTARLKVLGNLDIAEHRLPQDGQFTVTLAGNAVSFRVAILPCRDGEKVVLRLLHQVEQALDLNALGMPDTQLALLMQALRQPQGLVLVTGPTGSGKTVTLYSALQARNTQDVNLCSVEDPVEIPVEGLNQTQIHPRAGLTFQSVLRALLRQDPDIIMVGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPYCRHLAAEPVSLPAALWPTTLPRWQAPGCERCYHGFYGRTALFEVLPVTPALRQLLINNATVEALESCARQEGMSTLFENGCHAVEQGLTTFEELLRVLGLPHVS
>NZ_CP022073.1|WP_058668572.1|684545_685748_+|protein-transport-protein-HofC
MSAKQLWRWQGINATGHSEEGALWADDRAALLVALEHQHIMPIRAKRLSVKAAHWHAEQSAEIVHQLATLLKAGLTLSEGLTLLAGQHPSRQWQALLQTLAHNLEQGAPLSSALAQWPQVFPPLYQAMIRTGELTGKLDECCFELARQQNAQKQLADKVKKALRYPIIILTMAVMVVFAMLHFVLPEFAAIYRTFNTPLPALTQGIITLAQWSAQWGWLMALPGVAMGVIYGLIIKKPYWQIQRQRLLLRCPVIARLVRGQKLTQIFTILALTQRAGIPFSQGLESVAETLNCPYWSQRLAQVHRDIHAGKPVWQALKNAGEFSPLCIQLVMTGETSGALDAMLHNLARHHGENTLSLADNLAALLEPALLVITGVIIGTLVVAMYLPVFHLGDAMSGMG
>NZ_CP022073.1|WP_058668571.1|685781_686825_-|GMP-reductase
MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQTWSGVPIIAANMDTVGTFEMASALASFDILTAVHKHYSVEDWNAFTSTASEDVLRHVMVSTGTSDADFEKTKQILAQSPALNFVCIDVANGYSEHFVQFVSKAREAWPTKTICAGNVVTGEMCEELVLSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTMPGDVAKAFGGGADFVMLGGMLAGHEESGGKIVEENGEKFMLFYGMSSESAMTRHVGGVAQYRAAEGKTVKLPLRGPVEYTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNSL
>NZ_CP022073.1|WP_058668570.1|687050_687671_+|dephospho-CoA-kinase
MRYTVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGQPALMAIAEHFGSALIAPDGSLQRRMLRERIFASPEEKSWLNALLHPLIQQETRRQFQQATSPYVLWVVPLLVENALYKQANRVLVVDVTPETQLLRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPDAIASDVARLHARYLQLASQFVSQEKP
>NZ_CP022073.1|WP_012134063.1|687670_688414_+|cell-division-protein-ZapD
MHTQVLFEHPLNEKMRTWLRIEFLIQQLSVNLPLADHADALHFFRNIGDLLDVFERGEVRTELLKELERQQRKLQAWVEVPGVDQSRIEALRQQLKTAGSILISAPRIGQQLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQEQRDAQVETWIASLNPLNQALTLILDLIRNSSPFRKQTSLNGFYQDNGDDADLLRLQLALDSQLYPQISGHKSRFAIRFMPLDSENGLVPERLDFELACC
>NZ_CP022073.1|WP_047458910.1|688423_688618_+|DNA-gyrase-inhibitor-YacG
MSETITVSCPTCGKTVVWGEVSPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWSEEQK
>NZ_CP022073.1|WP_058668569.1|688691_689081_-|8-oxo-dGTP-diphosphatase-MutT
MKKLQIAVGIIRNPNHEIFITQRAADAHMANKLEFPGGKIEAGETPEQALIRELQEEVGITPRDATLFEKQEYQFPDRHITLWFWLVDHWEGEPWGKEGQPGRWIAQNALNAEDFPPANAPVIEKLIAG
>NZ_CP022073.1|WP_047458916.1|689139_691845_-|preprotein-translocase-subunit-SecA
MLIKLLTKVFGSRNDRTLRRMRKAVGIINAMEPEMEKLSDDELKGKTAEFRARLEKGESVESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVNKIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVLIEELLVKEGIMDEGESLYSPGNIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDMPDLVYMTEAEKIQAIIEDIKERTANGQPVLVGTISIEKSEVVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAELENPTPEQIAQIKADWQVRHEAVLASGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYTQRNELLDVSDVSETINSIREDVFKVTIDAYIPPQSLEEMWDIPGLQERLKNDFDLDMPIAEWLDKEPELHEETLRERILAHSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVVSTLSKVQVRMPEEVEAMEQQRREEAERLAQMQQLSHQDDDSAAAAALAAQTGDRKVGRNDPCPCGSGKKYKQCHGRLS
>NZ_CP022073.1|WP_058668568.1|691906_692413_-|secA-regulator-SecM
MSGILTRWRQLGRRYFWPHLLLGMVAASFGLPALSNAAEPNTPAKATASNHDQSAKVNFSQLALLEASNRRPNFTVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESSPLQAHHIALLNTLSAMLTQEGTPPTIVRRVARAHFTPQASFSVPAWISQAQGIRAGPQRLS

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Crispr_ID: NZ_CP022073_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_2

780584-780663

Orphan

Consensus_repeat	Method
TTACGCTTACCGGGCCTACAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_2

>merge|NZ_CP022073|2|780584-780663|CRISPRCasFinder
TTACGCTTACCGGGCCTACAAGAGGCTTGTTTTGGGCTACCTGTTTGCCCGGTGGCGCTACGCTTACCGGGCCTACAAGA

>NZ_CP022073|2|2|780584-780663|CRISPRCasFinder
TTACGCTTACCGGGCCTACAAGA	GGCTTGTTTTGGGCTACCTGTTTGCCCGGTGGCG
CTACGCTTACCGGGCCTACAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058668548.1\|776768_778406_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP022073.1\|WP_001518655.1\|785326_785590_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP022073.1\|WP_058668551.1\|771500_772130_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|178546
NZ_CP022073.1\|WP_047459022.1\|780717_781206_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_CP022073.1\|WP_049008862.1\|785023_785224_-\|DUF2575-domain-containing-protein	unknown	unknown	gnl\|CDD\|287773
NZ_CP022073.1\|WP_012134149.1\|779135_780086_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP022073.1\|WP_058668547.1\|781205_784022_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP022073.1\|WP_012134160.1\|791542_792109_+\|acetate-uptake-transporter	unknown	unknown	gnl\|CDD\|182625
NZ_CP022073.1\|WP_058668550.1\|773116_774031_-\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
NZ_CP022073.1\|WP_077956851.1\|785687_786590_-\|transcriptional-activator-NhaR	unknown	unknown	gnl\|CDD\|182938
NZ_CP022073.1\|WP_012134158.1\|789224_791141_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP022073.1\|WP_024130722.1\|774179_775043_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP022073.1\|WP_012134153.1\|784059_784998_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP022073.1\|WP_047463780.1\|788003_789137_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236757
NZ_CP022073.1\|WP_012134142.1\|772220_773120_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP022073.1\|WP_106068017.1\|780087_780537_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP022073.1\|WP_058668552.1\|770492_771314_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP022073.1\|WP_058668546.1\|786652_787819_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|181955
NZ_CP022073.1\|WP_049010161.1\|778395_779088_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP022073.1\|WP_012134145.1\|775067_776435_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058668548.1\|776768_778406_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.41868e-165
NZ_CP022073.1\|WP_001518655.1\|785326_785590_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	2.59008e-26
NZ_CP022073.1\|WP_058668551.1\|771500_772130_-\|hypothetical-protein	gnl\|CDD\|178546	PLN02961, PLN02961, alanine-tRNA ligase.	8.11624e-23
NZ_CP022073.1\|WP_047459022.1\|780717_781206_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	4.52637e-76
NZ_CP022073.1\|WP_049008862.1\|785023_785224_-\|DUF2575-domain-containing-protein	gnl\|CDD\|287773	pfam10837, DUF2575, Protein of unknown function (DUF2575). This family of proteins appears to be restricted to Enterobacteriaceae. Members in the family are annotated as yaaY but currently there is no known function.	9.21716e-29
NZ_CP022073.1\|WP_012134149.1\|779135_780086_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP022073.1\|WP_058668547.1\|781205_784022_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP022073.1\|WP_012134160.1\|791542_792109_+\|acetate-uptake-transporter	gnl\|CDD\|182625	PRK10659, PRK10659, acetate uptake transporter.	1.95296e-108
NZ_CP022073.1\|WP_058668550.1\|773116_774031_-\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
NZ_CP022073.1\|WP_077956851.1\|785687_786590_-\|transcriptional-activator-NhaR	gnl\|CDD\|182938	PRK11062, nhaR, transcriptional activator NhaR; Provisional.	0
NZ_CP022073.1\|WP_012134158.1\|789224_791141_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP022073.1\|WP_024130722.1\|774179_775043_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	5.80934e-84
NZ_CP022073.1\|WP_012134153.1\|784059_784998_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	2.46607e-176
NZ_CP022073.1\|WP_047463780.1\|788003_789137_-\|molecular-chaperone-DnaJ	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
NZ_CP022073.1\|WP_012134142.1\|772220_773120_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.36875e-70
NZ_CP022073.1\|WP_106068017.1\|780087_780537_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	7.99901e-107
NZ_CP022073.1\|WP_058668552.1\|770492_771314_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	4.37663e-142
NZ_CP022073.1\|WP_058668546.1\|786652_787819_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|181955	PRK09561, nhaA, sodium/proton antiporter NhaA.	0
NZ_CP022073.1\|WP_049010161.1\|778395_779088_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	1.8451e-67
NZ_CP022073.1\|WP_012134145.1\|775067_776435_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	6.49917e-165

>NZ_CP022073.1|WP_106068017.1|780087_780537_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSKSVQSNSAVLVHFTLKLDDGSTAESTRNNGKPALFRLGDGSLSEGLEQHLLGLKDGDKTTFSLEPDAAFGVPSPDLVQYFSRRKFMDAGEPEVGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGHTVHFDIEVLEIDPALEA
>NZ_CP022073.1|WP_012134149.1|779135_780086_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVLSLDVKNEGKLSFMTQTTLSVDDTSDVIDALRQRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGKAAFLIDDATDIQEAWVKEAKCVGVTAGASAPDILVQNVIARLQELGGGEAIPLEGREENIVFEVPKELRVDVREVE
>NZ_CP022073.1|WP_049010161.1|778395_779088_+|response-regulator
MQPELIDVLIVEDENELAQLHAELIDKHPRLRLAGIASTLADARQKLNQLRPQLLLLDNYLPDGKGITLISDPLVMNTNCSVIFITAASDMDTCSLAIRNGAFDYILKPISWKRLSQSLERFVQFAEQQRVWKIVDQQNVDSLYLLQAKNYRQENGSKGIEEITLALVQKLFTENSTRSFSVDDVVAGTGLSKTTARRYVEHGVETGFLRVEMLYGKPGHPRRMYRLSET
>NZ_CP022073.1|WP_058668548.1|776768_778406_+|sensor-histidine-kinase
MKVSFQIKLFISLIAFFSILFALLGGYYYMHVEKQLYQEMGARAKIQAEEIALIPNLRKEVVERDTTAIHQFMQKIAAHSDASFIVIGDKEGIHLFHSVYADRVGKKLVGDDNTEVLHGKSTTTIRRGGLGISLRSKAPIVDDQGEVIGIVSVGYLTSYLNTITVNKAVSILVAAILLLISLFVFSWFFTRSIKKQIFSLEPREIGLLVRQQKAMMESIYEGVIAIDNNLHIEVINQAARELLGLGQPAQAIRGQHITEVITPSPFFLKEVMLKNDTHDEICRFNELTVIASRVRIMLENSLQGWVITFRDRNEIDSLSAQLSQVKRYVDNLRIMRHEQLNCMTTLSGLLHMGRYNEAIDYIQAQSEHAQELLDFISSRFSSPTLCGLLLGKAARAGEKGVELNFDPSCRMDGPFPPLAESELISILGNLLDNAIEATQRSTLPHAPVDVLIRLNEHELIIEVADQGVGIKPEIREHIFERGVTTKTRGDHGIGLYLIESYVTQAGGVIEVADNSPRGAIFTLFIPATGISRSPVQELEGTDYAT
>NZ_CP022073.1|WP_012134145.1|775067_776435_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDDSFSVTHEPLNIQRLSLKERWWHIMDTWKIGIIPLPMFLLAGALIAIDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPIVGKLGAAAICATFIPSALVYYGLLPDVVVESTTKFYKSTNILYLYICCIIVGSIMSMNRTVLIQGFLRIFFPMLCGEIVGMVVGMGVGLALGLEPFQIFFFIILPIMAGGVGEGAIPLSIGYATLLHMDQGVALGRILPMVMLGSLTAIIISGCLNQLGKRFPHLTGEGQLMPNRANADEQSPSLAEGVSGKTDVTTIAAGALLAILLYMLGMLGHKLIGLPAPVGMLFVAVLVKLVNGVSPRVLEGSQVVYKFFQTSVTYPILFAVGVAITPWEELVNAFTLTNLLVIISTVAALVATGFFVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSISLLVLGNFLI
>NZ_CP022073.1|WP_024130722.1|774179_775043_-|fumarylacetoacetate-hydrolase-family-protein
MKLASFLYQGTRSYGIVTAGGVIDLGNRIGDQYRDLKALLQGDGLEQARRFAQAPVDLKMDAITFLPVIERPEKILCVGMNYAEKRQEFDQHDPAPTLFVRFADSQTGHNMPVLKPRHSHEFDYEGELAVIIGNGGENISRDHALDHVAGYSCYMDGSARDWQHSWFTAGKNWRQTGAFGPWMVTADEIPDPHQLAIRTWLNGRMVQEDNTSSMIHKVAELIEYISTFTRLNSGDVIITGSPGGVGKKRNPPLFMQEGDRIEVEIEHIGHLSNVIMEAPLQAFAAAH
>NZ_CP022073.1|WP_058668550.1|773116_774031_-|ribonucleoside-hydrolase-RihC
MRLPIILDTDPGIDDAAAIAAALFAPQLDLQLMTTVAGNVSVEKTTRNALQLLHFWNVDIPLAQGAATPLLRPLRDAAYVHGESGMEGYDFVAHDCQPLAKPAFIAIRDALMSAPEPVTLVAIGPLTNIALLLTHYPECAFNIRRLVIMGGSAGRGNFTPNAEFNIAVDPEAASRVFQSGIEIVMCGLDVTNQALLAPDYLAKLPELNRTGKMLHALFSHYRSGSMNTGLRMHDLCAIAWLVRPDLFTVKPCFVAVETQGEYTAGTTVVDIEGLLGKSPNVQVALEIDVAGFQQWVADVLALAP
>NZ_CP022073.1|WP_012134142.1|772220_773120_+|LysR-family-transcriptional-regulator
MNLTLLPDLATFVLIVDHGSFSAAARAAGVTPSAMSRSVSRLERETGSQLLHRSTRKLALSETGKMVYEHAKMMLEAARQAIDSGGSVQHVPQGKITLSVPKAVGRFVIHPLIPQFLERFPLVDVCLRLEDRYMDLIDDGVDLALQITNTPSPGLHGKPLMPITHILCATPEYLQKQGTPTHPEDLRQHSCISLGETPTDSRWKFRKQGKTEVVQTTGRYAANHTGVRLDAVKRHLGIGSLPAFTAREALQDGEIMQVLPEWTFISNYSGELWLLWAGNKHMPLKIRAMIDYLSQQLKS
>NZ_CP022073.1|WP_058668551.1|771500_772130_-|hypothetical-protein
MTERLYYNTDDTEGMVCVTGCSPQMDGLYAVTLDKTLFHPQGGGQPADKGWIADIPVCGIMLRDNQIIHILPQPVAAGVVQLKVDAQTRLLNSRLHSAGHLIGCAGETWGWSPVKAHHWPGEGRITFSAGEHARLPDAENLLACIEQWQAKDYARRIEFDGERRKVGFGELPMYFCGGTHVTSLGQLGRIMIGGIKMKKGQLIINYSIE
>NZ_CP022073.1|WP_058668552.1|770492_771314_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDAQIRVAIAGAGGRMGRQLIQAALGMDGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLEAVKDDFDIFIDFTRPEGTLSHLAFCRQHGKGIVIGTTGFDDAGKQAIRDAAQDIGIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKACAVYSREGYTGERVPGTIGFATVRAGDIVGEHTAMFADIGERIEITHKASSRMTFANGAVRSAIWLKSKPNGLFDMRDVLDLNNL
>NZ_CP022073.1|WP_047459022.1|780717_781206_-|lipoprotein-signal-peptidase
MSKPLCSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVSLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGICVILMVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADSAICIGAALIVLEGFLPKKQA
>NZ_CP022073.1|WP_058668547.1|781205_784022_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGFDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFHAADQDAVKATFGVSSVNGPISLVIWTTTPWTLPANRAISLAPDFDYALVQIDGQALILAKDLVESVMQRLGAADYTILGTVKGAELELLRFTHPFMDFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGAYLPGTYPTLDGVNVFKANDIVVALLREKGALLHVEKLQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLREQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRAIELMEEVAKRVEVDGIQAWWDLDPKEILGDDADQYVKVPDTLDVWFDSGSTHASVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPVKDMVKPEEMVVLDRWAVGCAKAAQDDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQSALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYEGLFGLGETEAMNDAYWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGAKVADYAEASADAQQSELLKGLKVALSKAEGEKCPRCWHYTTDVGKVAEHAEICGRCVSNIAGDGEKRKFA
>NZ_CP022073.1|WP_012134153.1|784059_784998_-|bifunctional-riboflavin-kinase/FAD-synthetase
MKLIRGIHNLSQAPHGCVLTIGNFDGVHRGHRALLQGLREEGRKRGLPVMVMIFEPQPLELFATEKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKRLGVRFLAVGDDFRFGAGREGDFLLLQKAGAEYGFDITNTQTFCEGGVRISSTAVRQALAEDNLPLAESLLGHPFTISGRVVHGDELGRTIGFPTANLPLRRQVSPVKGVYAVEVMGLGDKPMPGVANIGTRPTVAGVRQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFASLDELKAQIARDELTARDFFGLSKPA
>NZ_CP022073.1|WP_049008862.1|785023_785224_-|DUF2575-domain-containing-protein
MWRHSLRSDGAGFYQLAGREYSFSTIKITLNGQFLVLICPITMKTIFFMFHRGNRRLTLTAVQGIL
>NZ_CP022073.1|WP_001518655.1|785326_785590_+|30S-ribosomal-protein-S20
MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAALKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
>NZ_CP022073.1|WP_077956851.1|785687_786590_-|transcriptional-activator-NhaR
MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIKALEERLQGKLFKRKGRGLEPSELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSNVLDAAVVDDEQIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECSVSFWCTKPLPAKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGATHNAIFVAPTLYAHDFYADESIVEIGRVENVMEEYHAIFAERMIQHPAVQRICHADYSALFSHKG
>NZ_CP022073.1|WP_058668546.1|786652_787819_-|Na+/H+-antiporter-NhaA
MKHLHRFFSSDASGGIILIIAAVLAMLMANSGFTSGWYHAFLETPVQLRVGAFEINKNMLLWINDALMAVFFLLIGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYSDPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIVIIALFYTSDLSMVSLGVAAFAIVLLAVLNLCDVRRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAKLPEGTRFQQIMAVGILCGIGFTMSIFIASLAFGSVDPALINWAKLGILIGSLLSAVIGYSWLRTRLSPVV
>NZ_CP022073.1|WP_047463780.1|788003_789137_-|molecular-chaperone-DnaJ
MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGGGFGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVEKTKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPHETQTGKLFRMRGRGVKSVRGGAQGDLLCRVVVETPVGLNEKQKQLLKDLQESFGGPTGEKNSPRSKSFFDGVKKFFDDLTR
>NZ_CP022073.1|WP_012134158.1|789224_791141_-|molecular-chaperone-DnaK
MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRMINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTALISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHSTRKQVEEAGDQLPADDKTAIESALSALETALKGEDKAAIEAKMQELAQASQKLMEIAQQQHAQQQAGGADASANNAKDDDVVDAEFEEVKDKK
>NZ_CP022073.1|WP_012134160.1|791542_792109_+|acetate-uptake-transporter
MGNTKLANPAPLGLMGFGMTTILLNLHNAGFFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKMGLTEAPNAQFLGAYLGLWGVFTLFMFFGTLKAARALQFVFLSLTVLFALLAFGNIAGNEAVIHVAGWIGLVCGASAIYLAMGEVLNEQFGRTILPIGEAH

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Crispr_ID: NZ_CP022073_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_3

964507-964631

Orphan

Consensus_repeat	Method
TGCGCCGGATGGCGGCTCCGCCTTATCCGGCCTACGACAGTGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_3

>merge|NZ_CP022073|3|964507-964631|CRISPRCasFinder
TGCGCCGGATGGCGGCTCCGCCTTATCCGGCCTACGACAGTGCCGTTTGTAGGCCCGGTAAGCACCAGCGCCACCGGGCATTGCGCCGGATGGCGGCTCCGCCTTATCCGGCCTACGGCAGTGCC

>NZ_CP022073|3|3|964507-964631|CRISPRCasFinder
TGCGCCGGATGGCGGCTCCGCCTTATCCGGCCTACGACAGTGCC	GTTTGTAGGCCCGGTAAGCACCAGCGCCACCGGGCAT
TGCGCCGGATGGCGGCTCCGCCTTATCCGGCCTACGGCAGTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_024130767.1\|961902_962391_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_CP022073.1\|WP_047463800.1\|966971_969680_-\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|236705
NZ_CP022073.1\|WP_058668482.1\|960271_961675_+\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP022073.1\|WP_012134348.1\|970103_971051_+\|HTH-type-transcriptional-regulator-TreR	unknown	unknown	gnl\|CDD\|181905
NZ_CP022073.1\|WP_058668481.1\|964100_964487_+\|2-iminobutanoate/2-iminopropanoate-deaminase	unknown	unknown	gnl\|CDD\|105214
NZ_CP022073.1\|WP_012134334.1\|958164_959097_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NZ_CP022073.1\|WP_058668480.1\|971227_972646_+\|PTS-trehalose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|182896
NZ_CP022073.1\|WP_012134340.1\|962617_963553_+\|aspartate-carbamoyltransferase	unknown	unknown	gnl\|CDD\|223614
NZ_CP022073.1\|WP_047459361.1\|964671_965958_-\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509
NZ_CP022073.1\|WP_012134354.1\|976139_977537_+\|PTS-lactose-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|224218
NZ_CP022073.1\|WP_012134341.1\|963564_964026_+\|aspartate-carbamoyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|234859
NZ_CP022073.1\|WP_058668483.1\|959209_960214_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NZ_CP022073.1\|WP_024130768.1\|962480_962615_+\|pyr-operon-leader-peptide	unknown	unknown	gnl\|CDD\|285317
NZ_CP022073.1\|WP_012134344.1\|965988_966498_-\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP022073.1\|WP_058668479.1\|972695_974351_+\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|182849
NZ_CP022073.1\|WP_058668478.1\|977551_980170_+\|alpha-mannosidase	unknown	unknown	gnl\|CDD\|182093
NZ_CP022073.1\|WP_012134352.1\|975299_975959_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP022073.1\|WP_047459367.1\|974548_975295_+\|membrane-protein	unknown	unknown	gnl\|CDD\|368776
NZ_CP022073.1\|WP_077956855.1\|962381_962501_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_012134333.1\|956933_958154_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_024130767.1\|961902_962391_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	1.01431e-50
NZ_CP022073.1\|WP_047463800.1\|966971_969680_-\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|236705	PRK10517, PRK10517, magnesium-transporting P-type ATPase MgtA.	0
NZ_CP022073.1\|WP_058668482.1\|960271_961675_+\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP022073.1\|WP_012134348.1\|970103_971051_+\|HTH-type-transcriptional-regulator-TreR	gnl\|CDD\|181905	PRK09492, treR, HTH-type transcriptional regulator TreR.	0
NZ_CP022073.1\|WP_058668481.1\|964100_964487_+\|2-iminobutanoate/2-iminopropanoate-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	1.68379e-64
NZ_CP022073.1\|WP_012134334.1\|958164_959097_+\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NZ_CP022073.1\|WP_058668480.1\|971227_972646_+\|PTS-trehalose-transporter-subunit-IIBC	gnl\|CDD\|182896	PRK11007, PRK11007, PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional.	0
NZ_CP022073.1\|WP_012134340.1\|962617_963553_+\|aspartate-carbamoyltransferase	gnl\|CDD\|223614	COG0540, PyrB, Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism].	8.75262e-165
NZ_CP022073.1\|WP_047459361.1\|964671_965958_-\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	8.29284e-144
NZ_CP022073.1\|WP_012134354.1\|976139_977537_+\|PTS-lactose-transporter-subunit-IIB	gnl\|CDD\|224218	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism].	1.25529e-64
NZ_CP022073.1\|WP_012134341.1\|963564_964026_+\|aspartate-carbamoyltransferase-regulatory-subunit	gnl\|CDD\|234859	PRK00893, PRK00893, aspartate carbamoyltransferase regulatory subunit; Reviewed.	3.06625e-84
NZ_CP022073.1\|WP_058668483.1\|959209_960214_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP022073.1\|WP_024130768.1\|962480_962615_+\|pyr-operon-leader-peptide	gnl\|CDD\|285317	pfam08052, PyrBI_leader, PyrBI operon leader peptide. This family consists of the pyrBI operon leader peptides. The expression of the pyrBI operon, which encodes the subunits of the pyrimidine biosynthetic enzyme aspartate transcarbamylase. is regulated primarily through a UTP-sensitive transcriptional attenuation control mechanism. In this mechanism, the concentration of UTP determines the extent of coupling between transcription and translation within the pyrBI leader region, hence determining the level of rho-independent transcriptional termination at an attenuator preceding the pyrB gene.	2.57484e-21
NZ_CP022073.1\|WP_012134344.1\|965988_966498_-\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	1.29195e-30
NZ_CP022073.1\|WP_058668479.1\|972695_974351_+\|alpha,alpha-phosphotrehalase	gnl\|CDD\|182849	PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional.	0
NZ_CP022073.1\|WP_058668478.1\|977551_980170_+\|alpha-mannosidase	gnl\|CDD\|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	0
NZ_CP022073.1\|WP_012134352.1\|975299_975959_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.42864e-26
NZ_CP022073.1\|WP_047459367.1\|974548_975295_+\|membrane-protein	gnl\|CDD\|368776	pfam06178, KdgM, Oligogalacturonate-specific porin protein (KdgM). This family consists of several bacterial proteins which are homologous to the oligogalacturonate-specific porin protein KdgM from Erwinia chrysanthemi. The phytopathogenic Gram-negative bacteria Erwinia chrysanthemi secretes pectinases, which are able to degrade the pectic polymers of plant cell walls, and uses the degradation products as a carbon source for growth. KdgM is a major outer membrane protein, whose synthesis is strongly induced in the presence of pectic derivatives. KdgM behaves like a voltage-dependent porin that is slightly selective for anions and that exhibits fast block in the presence of trigalacturonate. In contrast to most porins, KdgM seems to be monomeric.	1.41657e-22
NZ_CP022073.1\|WP_012134333.1\|956933_958154_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0

>NZ_CP022073.1|WP_058668481.1|964100_964487_+|2-iminobutanoate/2-iminopropanoate-deaminase
MSKTIATENAPAAIGPYVQGVDLGSMIITSGQIPVDPKTGSVPDDVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTGHNATFPARSCVEVARLPKDVKIEIEAIAVRR
>NZ_CP022073.1|WP_012134341.1|963564_964026_+|aspartate-carbamoyltransferase-regulatory-subunit
MTHDNKLQVEAIKRGTVIDHIPAQVGFKLLTLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLTEEQVNQLSLYAPQATVNRIDNYDVVGKSRPSLPDRIDNVLVCPNSNCISHAEPVSSSFAVKKRTDDIALKCKYCEKEFSHYVVLAN
>NZ_CP022073.1|WP_012134340.1|962617_963553_+|aspartate-carbamoyltransferase
MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGANQHPTQTLLDLFTIQETQGRLDNLNIAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSAIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLNGARENMKVLHPLPRIDEITTDVDKTPHAWYFQQAGNGIFARQALLALVLNSDLAL
>NZ_CP022073.1|WP_024130768.1|962480_962615_+|pyr-operon-leader-peptide
MVQCVRHSVLPRLKTDAGLPFFFPLLTYSRPLIEGLFFCPGVRR
>NZ_CP022073.1|WP_077956855.1|962381_962501_-|hypothetical-protein
MSYTLNHTSSRQIVRDYTQLCYGIKRLMHILFIANGSHE
>NZ_CP022073.1|WP_024130767.1|961902_962391_+|arginine-repressor
MKEYNDCSAKEQQQLAVCQRLITEKSYLSQEEIRRDLQNHGFEGISQSTVSRLLKLLGVIKIRNTKGQKIYSVNPQLRPAPDAARSISEMVVSVEHNSEFILIHTVAGYGRAVARILDYHALPEILGVIAGSSIVWVAPRVVQRTGLVHKQINYLLKMNSYS
>NZ_CP022073.1|WP_058668482.1|960271_961675_+|YfcC-family-protein
MGKFKFPSAYTILFILIALVAVMTWIVPAGKYQMAMNPTLGKEVPVAGTYAPAESHPQGITAVLLAPIDGLYNHETYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTVRLNGKEEWMIPILMGLFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAAATVLLGAGIGTLGSTINPFATVIAANAAGIPFTQGMLLRIILLVVGYVICVVWVMRYARKVRSNPELSIVADKMEENRAHFLGNRSSTLLEFTATRKWILLIFAAAFAVMIYGVAVLGWWMAEISGVFLASAIIVGVIARMSEESFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLSTTIFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGIVNLITPTSAVVMGGLAIARVPYVRYLKWVAPLLLILTLLNMAVLSVGAML
>NZ_CP022073.1|WP_058668483.1|959209_960214_+|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDFTPTEIQYLIDLAIELKAAKKARREKQTLVGKNIALIFEKTSTRTRCAFEVGAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIEYRGFGQQIVEELGQYAGVPVWNGLTDEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDDALVAQCRDIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMKPYQINQQVINATGNPNVKFMHCLPAFHNEHTKVGREIEAAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>NZ_CP022073.1|WP_012134334.1|958164_959097_+|carbamate-kinase
MDNKPTLVVALGGNALLKRGEPLEADIQRKNIDLAAKTIAQLTQQWRVVLVHGNGPQVGLLALQNSAYDRVTPYPLDILGAESQGMIGYMLQQSLKNQLPQREISVLLTQVEVDADDPAFRNPTKYIGPVYDGDQANALQAEKGWIFKADGKAFRRVVPSPQPKRIVESDAIRALIARDHLVICNGGGGVPVVEKADGFHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLSEMQFDAGSMGPKVTACAEFVSHCQGIAGIGSLADGPAILSGDKGTLIRPETVDYDA
>NZ_CP022073.1|WP_012134333.1|956933_958154_+|arginine-deiminase
MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDVIEAKTWLLETQISDYRLGPTFAADIRAWLADMPHRELARHLSGGLTYGEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKTARQRETNNLRAIYRWHPQFADGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQGIEFLAQSLFKHRQAERVIAVELPKHRSCMHLDTVMTHIDIDTFSVYPEVVRPDVQCWTLTPDGRGGLKRTQESTLVHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLERDGI
>NZ_CP022073.1|WP_047459361.1|964671_965958_-|TRAP-transporter-large-permease
MDAFILVFTLGIMLAIGVPVAYAVGISAIIGAWYIDIPLEAVMIQLTSGVNKFSLLAIPFFILAGAIMAEGGIARRLVNFAYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSVMIPEMDKKGYPRDFAAAVTASGSVQAILTPPSHNSVIYSLATGGTVSIAALFIAGILPGLLLSFTLMVMCVGFAHKRGYPKGERVPFRQALKIFVDTLWGLMTVVIIMGGILSGIFTATESAAIACLWAFFVTMFIYRDYKWSELPKLMYRTVKTVTIVMILIGFAAAFGAIMTYMQLPMRITEAFTSISDNKYVILMCINIMLLLIGTLMDMAPLILILTPVLLPVTTALGIDPVHFGMIMLVNLGIGLITPPVGSVLFVASAVSKQKIEQVVKAMLPFYAVLFLVLMLVTYIPAISLFLPKLFGVM
>NZ_CP022073.1|WP_012134344.1|965988_966498_-|TRAP-transporter-small-permease
MGEFYSSVMDLFYRISMWVAGLALLIMVAVIPVGIFARYVMNSALSWPEPVAILCMVTFTFVGAAVSYRAGSHIAVSMVTDRLSEGAQRICFIVADLMLMAVSLFILWYGSLLCYDLWEQPVAEFPLLSAGENYLPLPVGSAITLLFIIEKIFRGSQYQRPVVMLGSTH
>NZ_CP022073.1|WP_047463800.1|966971_969680_-|magnesium-translocating-P-type-ATPase
MLKNITRELFARLNRHLPHRLVHRDPLPSAQSVANTPIPPSLSDRCLKMAVMEEAALWRAFDAHPEGLNVAEVEDAREKYGENQLPTQKPTPWWRHLWVCYRNPFNILLTILGVISYATEDLFAAGVIALMVGISTLLNFVQEARSTKAADALKAMVSNTATVLRVINEKGENSWVELPIDQLVPGDIIKLAAGDMIPADLRVIQARDLFVAQASLTGESLPVEKVATTRDPKQSNPLECDTLCFMGTNVVSGTAQAIVIATGGETWFGQLAGRVSEQESEQNAFQKGISRVSMLLIRFMLVMAPIVLIINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDVSGKPSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARQLSGRWQKIDEIPFDFERRRMSVVVAEEADVHQLVCKGALQEILSVCTQVRHNGDIVPMDDNMLRRVKRVTDTLNRQGLRVVAVATKYLPAREGDYQRIDESDLILEGYIAFLDPPKETTAPALKALKESGITVKILTGDSELVAAKVCHEVGLDAGDVVTGSDIEGLSDDELAELAARTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFSNMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANVPEAQTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSRAAWPLMLMTLVVMVVGIALPFSPLAGYLQLQALPLSYFPWLIAILAGYMTLTQLVKGFYSRRYGWQ
>NZ_CP022073.1|WP_012134348.1|970103_971051_+|HTH-type-transcriptional-regulator-TreR
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPELVEEHLGMLRRRNIDGVVLFGFTGICEEMLAPWQASLVLLARDASGFASVCYDDEGAIHTLMQRLYDQGHRAISFLGVPHSDVTTGKRRHEAYLSFCKKNKLHPVAALPGLAMKQGYEHAADVITPDTSALVCATDTLALGASKYLQEQRIDSLQLASVGNTPLMKFLHPEIITVDPGYAEAGKQAALQLIEQINGRSDPRQIVIPSTLS
>NZ_CP022073.1|WP_058668480.1|971227_972646_+|PTS-trehalose-transporter-subunit-IIBC
MSKVKQADIDQLIELVGGRDNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTDVGDYYNALLATTGQAHADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMHPALKTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQAPEVWDFGMFSIAKVGYQAQVIPALLAGLALGFIETRMKRIVPDYLYLVVVPVCSLILAVFLAHAFIGPFGRMIGDGVAFAVRHLMTGSFAPVGAALFGFLYAPLVITSVHQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIIISSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFSMAMAIAVVIPIVLTSVIYQRKYRQGTLQIV
>NZ_CP022073.1|WP_058668479.1|972695_974351_+|alpha,alpha-phosphotrehalase
MNTLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQKLGVDAIWLTPFYVSPQIDNGYDVANYTAIDPAYGTLDDFDELAAQAKARGIRIILDMVFNHTSTQHAWFHNALNKESPHREFYIWRDGTPDAPPNNWRSKFGGSAWRWHAQSEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDQRFPNDLDGDGRRFYTDGPRAHEFLHEMNRDVFTPRNLMTVGEMSSTTLENCQRYAALDGSELSMTFNFHHLKVDYPGGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGELRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFSHITDYRDVESHNMFAWLRAQGREANDLLAILASKSRDNSRTPMQWDSSANAGFTQGEPWINLCDNYADINVAAALNDEDSVFYTYQRLIALRKTEPVLTWGNYQDLLPDSPHVWCYRREWQGQRLLVVANLSNACQAWLPEHHEGNWQALMHNYDEVATRPAAMTLRPFEAVWWLQK
>NZ_CP022073.1|WP_047459367.1|974548_975295_+|membrane-protein
MNKPLIKLSLLSALLISSQGWCGNTSVDLRFGHNTNSEANDSRIKVMHQADNGFYFSVEAAQNHNDTFFGDTDRYSSDDKGVTEAAQEIETRWRFDLGDGYSVAPGMVTVFTSSNTHYRPFIQGWKSFDNGLNLSARYRYNTVNDAHSDRELDGSGYTRRESHQFDIWFAYNIGNFGMSYNPRFRYQDGVDQGTGDDTYWEHTLAFNYKLDDGWTPYVELVSLDKTYINDDGHHENDYAVRLGIVKQL
>NZ_CP022073.1|WP_012134352.1|975299_975959_-|MurR/RpiR-family-transcriptional-regulator
MNSFQGSERLIFEYIQCHAHEISGISAKVIASETFTTTTSVNRVCKKMGYRSYTELRYQFSRDRLIAEPVRYVVGDEKEETITQLCNILVNSSHIFLYARGASLTSLNYLSRFLSLASLPHLILNDVHQLTRVSKGTLVLISKSGETASLVEMARNALRKGLKIIAITKRESTLATISTLCWPLDIDIDAISLYQREGQLELLTVVDRIGCYLLQYDAA
>NZ_CP022073.1|WP_012134354.1|976139_977537_+|PTS-lactose-transporter-subunit-IIB
MTRQKVVAITACPTGIAHTFMAANKIAAWGEENNVIVKVETQGSDGVKNKLSRQDIASADAVILAIDVPIQDAERFDNVPHLKIRTQELIKNTDRYLRQALAMDKTVTAACEEQEEARSAWQTFIGHIMAAISYMLPVVVLGGLLMAVAKITGQFIPIAGTPFEVLDKLGFMVIKFMYPVFAMYLAFSIAGKPALIPGLIGGIMSDEVYKRFFDLDGFMPSGFFGAIAIGFFVGHLVQWLNNTINVRAQLTTIKTMLIVPLCTGITLVIVMQYLINPFFGAINQAMVEFFTSAGDTGRGFYAMMIAAGTAFDLGGPINKAAGSVALGLNGVSETFDLTARELAIVIPSIGVGLAALLNNRFGLPNVFSSEEKTVGGTSLLLGFIGISEGAIPFILKNPRLIPVFMVGAMSGALIAIALGVKQSLPLPAIWGWPLATNVTGYLISVFAGSLVCALGVLFASPKIAK
>NZ_CP022073.1|WP_058668478.1|977551_980170_+|alpha-mannosidase
MSNIHVIAHTHWDQEWYFTLQDSNILASWNFADVIRTLEQNPAYTCYHFDGQTAVVEDFLAVNPQYCERLKQLVADRRLFIGPWYTQTDTYNVHGESIIRNLKYGILSARKLGHAMMVGYLPDTFGHNSQLPTLLRGCNLDNIVFWRGINHDTQVEKSQFIWQAPSGAQVIACAMPFGYGAAKNIRADDAHLHDKIFPIVNHIRQRSGLNDLLLPCGGDQVNIDPHLPEILRIASACSPEGDRFQISSLEAYIDRLRQQASGYDRWQGELKSPRYTRIHKTIGSVRYDIKKKNYDVEQFLLGKLEPTIALARYQGIEVNVQWVDQIWKNLLRNHAHDSIGGCNSDATNRDILHRLEQTEQLSHSLWNLVVKELATASCEEGDLFVINPSATAWSGIIKATLYSRTAGIELSHHARPLPFSVLERTQVSGGRTVQVTVQGEKEVELPPYYRWQVAIDAPALPPLGYTHIQVQESSRTAPAMRNCAESAIENNDYRLALHAGSLSLHDKRNGRVISDLLTFEDCADAGDSYDFSPLEGDVPQRCHTFTLIACEKGPHIERMTLSATLMLPPSLAARAAQDVQPYLVRLVCELRQHDAQLFIDVSLENTVCDHRLRLLINSDIRTTESIASQPFAVIRRPVTDAPADWRQHYREKPVDIETSEGIIAIEENNRSLIINSLGMKEFQICQNETAQIALTLFKSTGVLGRDDLDWRPGRASGINNTVVNTPDAQLLKPLHFSLTLALADRADPMTLRHLETRVTRQPFTWQNQTLNTLDNRLERFTLNFASRSLPETFSLLTLPEPLMLSAIPHAHTVDGTIIRIFNAGEHPVPLPPSLRNIPQINYLEEPVADCTAILPCSTCDFLFTHQERNEKV

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Crispr_ID: NZ_CP022073_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_4

1418096-1418214

Orphan

Consensus_repeat	Method
TGCCTTATCCGGCCTACAAAATAGTCCGTAGGCCCGGTAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_4

>merge|NZ_CP022073|4|1418096-1418214|CRISPRCasFinder
TGCCTTATCCGGCCTACAAAATAGTCCGTAGGCCCGGTAAGCGGTAGCGCCACCGGGCGTCTGCCGGATGGCGGCTATGCCTTATCCGGCCTACAAAACAGTCCGTAGGCCCGGTAAGC

>NZ_CP022073|4|4|1418096-1418214|CRISPRCasFinder
TGCCTTATCCGGCCTACAAAATAGTCCGTAGGCCCGGTAAGC	GGTAGCGCCACCGGGCGTCTGCCGGATGGCGGCTA
TGCCTTATCCGGCCTACAAAACAGTCCGTAGGCCCGGTAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058668367.1\|1424199_1425078_+\|sulfofructosephosphate-aldolase	unknown	unknown	gnl\|CDD\|226209
NZ_CP022073.1\|WP_024130674.1\|1423280_1424177_+\|sulfolactaldehyde-3-reductase	unknown	unknown	gnl\|CDD\|185358
NZ_CP022073.1\|WP_060815952.1\|1418230_1420945_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|237940
NZ_CP022073.1\|WP_058668365.1\|1426445_1428470_+\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|236691
NZ_CP022073.1\|WP_012133934.1\|1428515_1429898_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273270
NZ_CP022073.1\|WP_024130670.1\|1415061_1416003_-\|fatty-acid-biosynthesis-protein-FabY	unknown	unknown	gnl\|CDD\|370533
NZ_CP022073.1\|WP_012133935.1\|1429943_1431338_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273270
NZ_CP022073.1\|WP_047459887.1\|1416047_1416485_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP022073.1\|WP_012133924.1\|1416481_1417354_-\|virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|179313
NZ_CP022073.1\|WP_096753920.1\|1408649_1411700_+\|formate-dehydrogenase-N-subunit-alpha	unknown	unknown	gnl\|CDD\|273689
NZ_CP022073.1\|WP_047459878.1\|1414209_1414584_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350304
NZ_CP022073.1\|WP_012133920.1\|1414583_1414832_-\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|279710
NZ_CP022073.1\|WP_058668366.1\|1425093_1426335_+\|sulfoquinovose-isomerase	unknown	unknown	gnl\|CDD\|225493
NZ_CP022073.1\|WP_012133916.1\|1411712_1412615_+\|formate-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|273705
NZ_CP022073.1\|WP_058668371.1\|1412611_1413247_+\|formate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|182608
NZ_CP022073.1\|WP_058668370.1\|1417347_1417947_-\|glucose-1-phosphatase	unknown	unknown	gnl\|CDD\|181872
NZ_CP022073.1\|WP_047459875.1\|1413243_1414173_+\|formate-dehydrogenase-accessory-protein-FdhE	unknown	unknown	gnl\|CDD\|179595
NZ_CP022073.1\|WP_058668368.1\|1421381_1422185_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP022073.1\|WP_060815953.1\|1422217_1423114_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238920
NZ_CP022073.1\|WP_024130675.1\|1431426_1432119_+\|porin-OmpL	unknown	unknown	gnl\|CDD\|182179

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058668367.1\|1424199_1425078_+\|sulfofructosephosphate-aldolase	gnl\|CDD\|226209	COG3684, LacD, Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism].	3.07298e-146
NZ_CP022073.1\|WP_024130674.1\|1423280_1424177_+\|sulfolactaldehyde-3-reductase	gnl\|CDD\|185358	PRK15461, PRK15461, sulfolactaldehyde 3-reductase.	0
NZ_CP022073.1\|WP_060815952.1\|1418230_1420945_-\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|237940	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL.	0
NZ_CP022073.1\|WP_058668365.1\|1426445_1428470_+\|alpha-glucosidase	gnl\|CDD\|236691	PRK10426, PRK10426, alpha-glucosidase; Provisional.	0
NZ_CP022073.1\|WP_012133934.1\|1428515_1429898_+\|MFS-transporter	gnl\|CDD\|273270	TIGR00792, Melibiose_carrier_protein, sugar (Glycoside-Pentoside-Hexuronide) transporter. The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family (TC 2.A.2) GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP022073.1\|WP_024130670.1\|1415061_1416003_-\|fatty-acid-biosynthesis-protein-FabY	gnl\|CDD\|370533	pfam09500, YiiD_C, Putative thioesterase (yiiD_Cterm). This entry consists of a broadly distributed uncharacterized domain often found as a standalone protein. The member from Shewanella oneidensis is described from crystallography work as a putative thioesterase because it belongs to the HotDog clan of enzymes. About half of the members of this family are fused to an Acetyltransf_1 domain pfam00583.	1.07764e-62
NZ_CP022073.1\|WP_012133935.1\|1429943_1431338_+\|MFS-transporter	gnl\|CDD\|273270	TIGR00792, Melibiose_carrier_protein, sugar (Glycoside-Pentoside-Hexuronide) transporter. The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family (TC 2.A.2) GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.2427e-178
NZ_CP022073.1\|WP_047459887.1\|1416047_1416485_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	5.67448e-98
NZ_CP022073.1\|WP_012133924.1\|1416481_1417354_-\|virulence-factor-BrkB-family-protein	gnl\|CDD\|179313	PRK01637, PRK01637, virulence factor BrkB family protein.	5.08033e-178
NZ_CP022073.1\|WP_096753920.1\|1408649_1411700_+\|formate-dehydrogenase-N-subunit-alpha	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	0
NZ_CP022073.1\|WP_047459878.1\|1414209_1414584_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350304	cd18737, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.16721e-58
NZ_CP022073.1\|WP_012133920.1\|1414583_1414832_-\|CopG-family-transcriptional-regulator	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.00210676
NZ_CP022073.1\|WP_058668366.1\|1425093_1426335_+\|sulfoquinovose-isomerase	gnl\|CDD\|225493	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism].	6.48031e-148
NZ_CP022073.1\|WP_012133916.1\|1411712_1412615_+\|formate-dehydrogenase-subunit-beta	gnl\|CDD\|273705	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing. This model represents the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (TIGR01553) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	3.1982e-162
NZ_CP022073.1\|WP_058668371.1\|1412611_1413247_+\|formate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|182608	PRK10639, PRK10639, formate dehydrogenase cytochrome b556 subunit.	4.85162e-146
NZ_CP022073.1\|WP_058668370.1\|1417347_1417947_-\|glucose-1-phosphatase	gnl\|CDD\|181872	PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional.	2.30373e-156
NZ_CP022073.1\|WP_047459875.1\|1413243_1414173_+\|formate-dehydrogenase-accessory-protein-FdhE	gnl\|CDD\|179595	PRK03564, PRK03564, formate dehydrogenase accessory protein FdhE; Provisional.	0
NZ_CP022073.1\|WP_058668368.1\|1421381_1422185_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	9.63413e-88
NZ_CP022073.1\|WP_060815953.1\|1422217_1423114_-\|sugar-kinase	gnl\|CDD\|238920	cd01945, ribokinase_group_B, Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .	9.35349e-102
NZ_CP022073.1\|WP_024130675.1\|1431426_1432119_+\|porin-OmpL	gnl\|CDD\|182179	PRK09980, ompL, porin OmpL.	3.16854e-141

>NZ_CP022073.1|WP_058668370.1|1417347_1417947_-|glucose-1-phosphatase
MLYIFDLGNVIVDIDFNRVLGAWSDLSCVPLASLKQSFTMGEAFHQHERGEITDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIDIMHKLREQGHRVVVLSNTNRLHTTFWPDEYPEVRQAADHIYLSQELGMRKPEVRIYQHVLQTEGFSSADTVFFDDNADNIEGANQLGITSILVTDKTTIPDYFAKLLC
>NZ_CP022073.1|WP_012133924.1|1416481_1417354_-|virulence-factor-BrkB-family-protein
MLKNVHQKARHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSLQLRHFIFANFIPATGDVIQRYIEQFVANSNKMTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASELNTVIDNVLRVFPLILSWISFWLLYSIVPTTRVPNRDAVVGAFVAAVLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQAAEQEEADQS
>NZ_CP022073.1|WP_047459887.1|1416047_1416485_-|D-tyrosyl-tRNA(Tyr)-deacylase
MIALIQRVTRASVTVEGEVTGEIGQGLLVLLGVERDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPGFSRGAAPDRAEALYEYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV
>NZ_CP022073.1|WP_024130670.1|1415061_1416003_-|fatty-acid-biosynthesis-protein-FabY
MYHLRVPQTEEELARYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEEGNLVAVGRLYINADNEASIRFMAVEPSVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVAFFAKLGFVNQGEITTPQTTPVRHFLMIKPVATLDDILHRGDWCGQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHIRYSRPISGKPSAIADLGSLSGDLDRLARGRKARVQLQVELFGDETSGAVFEGIYIVLPAKPFGPYEEGGNEEE
>NZ_CP022073.1|WP_012133920.1|1414583_1414832_-|CopG-family-transcriptional-regulator
MSMMAGMEMGRILLDLSDEVIKRLDDLKQQRNLPRAELLREAVEQYLERQGQAETTISDALGLWQGCEEDGVEYERKLREEW
>NZ_CP022073.1|WP_047459878.1|1414209_1414584_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MIKGPVLFDTNILIDLFSGRDEAKKALEAYSPQNAISLITWMEVMVGAKKYHQESRTRIALSAFNVIGVSQDIAERSVSLRQEYGMKLPDAVILATAHIHRFALVTRNTKDFAGIPGVITPYHL
>NZ_CP022073.1|WP_047459875.1|1413243_1414173_+|formate-dehydrogenase-accessory-protein-FdhE
MSIRIIPQDELEKSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEANAQGKPPLDIHVLPRDKHWQKLLHSLIAELKPEMSGPALAVIENLEKASEQELEQMASALFESDFASVSSDKAPFIWAALSLYWAQMASLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSRDLHYWSLDNEQASIKAESCGDCGTYLKILYQEKDPKVEAVADDLASLVLDARMEQEGFARSSINPFLFPGEGE
>NZ_CP022073.1|WP_058668371.1|1412611_1413247_+|formate-dehydrogenase-cytochrome-b556-subunit
MKRRDTIVRYTAPERINHWVTAFCFVLAAVSGLGFLFPSFNWLMHIMGTPQLARIVHPFVGVIMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITAMVEGWVTRSWAKKHHPRWFREVRQKQEKSSE
>NZ_CP022073.1|WP_012133916.1|1411712_1412615_+|formate-dehydrogenase-subunit-beta
MAYQSQDIIRRSATNGFTPAPQARDHQQEVAKLIDVTTCIGCKACQVACSEWNDIRDEVGSNIGVYDNPADLTAKSWTVMRFSEVEQDDKLEWLIRKDGCMHCADPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDVPRLNPDDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGSKEAMKTLAGERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISATVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEEDNLHEEKDEVRK
>NZ_CP022073.1|WP_096753920.1|1408649_1411700_+|formate-dehydrogenase-N-subunit-alpha
MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVSRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDKWQQISWDEAFDRIAKLMKEDRDANYVAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDMKNANLIVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTASVADFYAPIRSGTDIAFLSGVLLYLLNNEKYNREYTEAYTNASLIVREDFGFEDGLFTGYDADKRKYDKTSWAYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPEVVENICGTPKADFLKVCAYIAETSVKDKTASFLYALGWTQHSIGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLTGYMTLPSEKQTDLQTYLAANTPKPLLEGQVNYWSNYPKFFVSMMKAFFGDNATKDNDWGFDWLPKWDKGYDVLQYFEMMNEGKVNGYLCQGFNPVASFPNKNKVVASLSKLKFLVTIDPLNTETSTFWQNHGESNDVDPSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGDAVTDGEILAGIFLRLRKMYAEQGGANPEQVLNMTWNYSTPHEPSSEEVAMESNGKALADLIDPATGAVIVKKGQQLSSFAQLRDDGTTSSGCWIFAGSWTPEGNQMARRDNSDPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQILKWDGAKWGGMDIPDYSAAAPGSNVGPFIMQPEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKGDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAIAQPEQFVEIGEKLANKLGIAHGDTVKVSSNRGYIKAKAVVTKRIRTLKADGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV
>NZ_CP022073.1|WP_060815952.1|1418230_1420945_-|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MKSSRLIQKTPIPAKLALCIASALALSGQAVAGCSYTSTAQLFCDNTTIYHYGNPLGGAARDYSGFDEVRIDTTSEGTTSGLTGWGVYIDNIGYKFKNLVINTTGTAADGIHSKNAGGKLVADNIYITATGSSADGINIGRELQADYSIVEVNGDVTVDAENGMGLRANASANKDNAQSSIIIHGDTDIVTRGPGGANTGYGIYAGRDPAQFTGTAKGDASITVNGTASVATSGRSAHAVYVARKGLINLNNVDLKTSGVSAHGVYAYSSTDSATVNLSGDSKIQVTDSGAYAIYAYGSQALVRSWDYATDSAGSGVYDIEGNLRAYYGGTMDLRMEEGSRFVGQADSSQQNSNANYHGTLDLDINGANSEWTMTGNSVVSTLTLNQAALRYSADGVSRDDESTFKTLTVMGNYTGTDALLVLNTVLEGDDSFTDKLIVKGDTSGNTNVGINNIGGVGDLTLNGIEIVDVEGVSDGTFTKAGRIVAGGYDYDVVKNASNWYLTSQLSPVEPEPEPEPEPEPENPDPVDPPTPPGPVDPVDPPAPPGPVDPVEPPTPPGPVDPVDPPAPPEPPLPPAPEPGEHQYRPEFGSYLANNYAANTLFITRLHDRLGETQYTDILTGEQKVTSMWMRNVGGHMRFTDGSKQLKTQANRYVLQIGGDLAQWSSDGLDRWHLGVMAGYANQKSKTHNTHNGYASRGHVNGYSAGLYATWYANEADKTGTYLDSWVLYNWFDNTVQGDHLASEKYKSDGITASIEGGYTFLIGESERTSYWLQPKAQVTWMDVQADSHRESNGTQVKDKTDGNLMTRLGVRAYLKGHNAIDDGKDREFQPFVEANWLHNTHNQSVQMGAIRDEISGTKNIGELKVGVEGQINPRLQVWGNVAQQVGDNSYSDTAAMLGVKYSF
>NZ_CP022073.1|WP_058668368.1|1421381_1422185_-|DeoR/GlpR-transcriptional-regulator
MSLTELTGNPRHDQLLALIGERGYMNIDELAGLLDVSTQTVRRDIRKLSDQGLITRHHGGAGRASSVVNTAFEQREVSWTEEKKAIAEAVADYIPDGSTVFITIGTTVEQVARALLNHNHLRIITNSLRVAHILYNNPRFEVMVPGGTLRPHNSGIIGPSATAFVAGFRADYLVTSVGAIESDGALLEFDVNEASVVKTMMAHSRHILLAADHTKYHASAAVEIGNVSQVTALFTDEYPGPALHNLLQSQQVEIVQVSPGLDDATSV
>NZ_CP022073.1|WP_060815953.1|1422217_1423114_-|sugar-kinase
MIRVACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAATAAVAAAKLGAQVDFIGRVGDDDTGNSLLAELESLGVNTRYTRRYAGAKSSQSAVIVDAKGERIIVNYPSPDLLHDADWLNEIDFSQWDVVLADVRWHEGAKRAFTLARRAGVMTVLDGDVTPQDISELVALSDHAAFSEPGLARLTGIQDTVSALKKSQMLTNGHVYVTRGGEGCDWLDDNDLRHQPGFLVEVVDTTGAGDVFHGALAFSLAGGTPIEEAVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV
>NZ_CP022073.1|WP_024130674.1|1423280_1424177_+|sulfolactaldehyde-3-reductase
MAVIAFVGLGQMGSPMASNLLKQGHQLSVFDVNPDAIQTLVEKGARPASSPAQAAKEAEFVITMLPNGDLVRSVLFGDQGVCEGLSQDALVIDMSTIHPLQTDKLIADMRARGFSMMDVPVGRTSDHAIAGTLLLLAGGSAEQVERATPVLMAMGNELINAGGPGMGIRVKLINNYMSIALNALSAEAAALCEALGLSFDVALKVMSGTPAGKGHFTTSWPNKVLKGDLSPSFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYNQARAAGRGREDWTAILEQVRNSAGLPNKFKM
>NZ_CP022073.1|WP_058668367.1|1424199_1425078_+|sulfofructosephosphate-aldolase
MNNYTIKDITRASGGFAMLAVDQREAMRLMFAAAGAKSPVADSVLTDFKVNAAKALSPYASAILIDQQFCYRQVVEQNAIAKNCAMIVAADAFIPGNGIPVDSVVIDKKINPQAIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNEMCHSNGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGAQHDLLAASQRLNEHINMPWVILSSGIDEKLFPRAVRVAMTAGASGFLAGRAVWSSVIGLPDTELMLRDISVPKLQRLGEIVDEMMAHRR
>NZ_CP022073.1|WP_058668366.1|1425093_1426335_+|sulfoquinovose-isomerase
MKWFNTLSHNRWLEQETDRIFDFGKKSVVATGFGWLGNQGQIRAEMGTHLWITARMLHVYSVAASMGRPGAYQLVDHGINALNGALRDRRYGGWYACVNDEGVMDASKQGYQHFFVLLGAASAVTTGHPQARKLLDDAIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDRKWLDRALRIASVIIHDVARNGDYRVNEHFDAQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATLRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTGDSQYEAWYQKWWDYCITYLMDYENGSWWQELDTNNQVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDSNAK
>NZ_CP022073.1|WP_058668365.1|1426445_1428470_+|alpha-glucosidase
MHTLHNITLTTIDNGFTLSWQDRLLLSHSAENPCLWIGAGVADIDMFRGNFSIKDKLNEKIALTDATISQSPDGWLIHFNRGDAISAALHIATDEAGRLTLKLQNSDLTHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKNSYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDNATLRFECADSYIALLEKLTALLGRQPVLPDWVYDGVTLGIQGGTDVCQQKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSDNYPQLDTRIKQWQEEGVQFLSYINPYVASDKDLCAEAARHGYLAKDAAGDDYLVEFGEFYGGVVDLTNPEAYDWFKNVIKKNMIELGCGGWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALQETGKLGEILFFMRAGYTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGYTTLFDMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKQAVAQNARTGLPVMRPLFLHYEDDAQTYTLKYQYLLGRDLLVAPVHEQGRRDWTLYLPEDNWINAWTGETLRGGEITVDAPLGKPPVFYRAESEWASLFASLRTI
>NZ_CP022073.1|WP_012133934.1|1428515_1429898_+|MFS-transporter
MSQTSSNPATLRLPFKEKLAYGMGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLIAKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEITGKTVMATVLFMLYGLFFSMMNCSYGAMVPAITKNPDERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVEVKPVEATEKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSWMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLVWVIGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVVQSAGTVEGLRQLIFIYPCALAVITIIAMGCFYNLNEKMYVRIVEEIEARKQTA
>NZ_CP022073.1|WP_012133935.1|1429943_1431338_+|MFS-transporter
MSDHDPLTLKLSLREKYAYGMGDFGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGVLLDSRRHIGAKGKFRPFILYASFPVALVASAQFLATDFTLTVKTALATVLFMLFGLFYSLMNCSYGAMVPAITRNPHERAQLAAWRQGGATLGLLLCTVGFMPIQALFTQSSSLGYLVAALIFSVCGLFSMWWCFSGVKERYIDIVPAHHKPSILKSFCAIFRNPPLLVLCVANLCTLAAFNIKLAIQVYYTQYVLNDIHLLSWMGFFSMGCILVGVLLVPVTVKRFGKKQVYLGGLTLWAIGDVLNFLWGGTSFLFVIFSCMAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFSRKISAALAGFLPGIMLTQIGYVPNIAQSAETLLGLRQLIFLWPCGLAIIAALTMGFFYKLNEKRFAFIIEEISQRKKQSIQTGVVSH
>NZ_CP022073.1|WP_024130675.1|1431426_1432119_+|porin-OmpL
MKTLNTIMLLSSVISTSVFAGAYVENREAYNLASDQMEFMLRVGYNSDMGAGIMLTNTYTLQRDDELKHGYNEIEGWYPLFKPTDRLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNLTVRNRYNHNNYSSTDLNGELDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNVNDFNSSNGTKHHWEITNTFRYRINQNWLPYLELRWLDRNVEPYHREQNQIRVGVKYFF

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Crispr_ID: NZ_CP022073_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_5

2489530-2489648

Orphan

Consensus_repeat	Method
GCCGGATGGCGGCTTTGCCTTATCCGGCCTACGTTTTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_5

>merge|NZ_CP022073|5|2489530-2489648|CRISPRCasFinder
GCCGGATGGCGGCTTTGCCTTATCCGGCCTACGTTTTGCATCTCTGTAGGCCCGGTAAGCGTAGCGCCACCGGGCACAAAGCCGGATGGCGGCTTTGCCTTATCCGGCCTACGTTTTGC

>NZ_CP022073|5|5|2489530-2489648|CRISPRCasFinder
GCCGGATGGCGGCTTTGCCTTATCCGGCCTACGTTTTGC	ATCTCTGTAGGCCCGGTAAGCGTAGCGCCACCGGGCACAAA
GCCGGATGGCGGCTTTGCCTTATCCGGCCTACGTTTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_024130919.1\|2493566_2494286_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP022073.1\|WP_058668054.1\|2497729_2499067_-\|fimbrial-usher-protein-StbD	unknown	unknown	gnl\|CDD\|185159
NZ_CP022073.1\|WP_058669118.1\|2496695_2496968_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225261
NZ_CP022073.1\|WP_049011223.1\|2491440_2492136_-\|lactate-utilization-protein-C	unknown	unknown	gnl\|CDD\|224473
NZ_CP022073.1\|WP_070518326.1\|2496981_2497764_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185158
NZ_CP022073.1\|WP_012134992.1\|2489698_2490244_-\|isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235156
NZ_CP022073.1\|WP_047461459.1\|2496453_2496684_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226120
NZ_CP022073.1\|WP_049008966.1\|2485073_2486807_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
NZ_CP022073.1\|WP_047461453.1\|2492128_2493556_-\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|129374
NZ_CP022073.1\|WP_058668059.1\|2480004_2480664_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|185044
NZ_CP022073.1\|WP_096753903.1\|2486893_2487992_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP022073.1\|WP_058668058.1\|2480817_2481798_-\|tRNA-modifying-protein-YgfZ	unknown	unknown	gnl\|CDD\|236567
NZ_CP022073.1\|WP_012134997.1\|2484354_2485068_+\|bifunctional-protein-disulfide-isomerase/oxidoreductase-DsbC	unknown	unknown	gnl\|CDD\|182802
NZ_CP022073.1\|WP_012134993.1\|2488001_2489519_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|171504
NZ_CP022073.1\|WP_024130922.1\|2482054_2482321_+\|FAD-assembly-factor-SdhE	unknown	unknown	gnl\|CDD\|182803
NZ_CP022073.1\|WP_058668057.1\|2490444_2491191_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|236782
NZ_CP022073.1\|WP_012134999.1\|2482806_2483331_-\|flavodoxin-FldB	unknown	unknown	gnl\|CDD\|183471
NZ_CP022073.1\|WP_058668056.1\|2494778_2496332_+\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP022073.1\|WP_012134998.1\|2483434_2484331_+\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
NZ_CP022073.1\|WP_024130921.1\|2482301_2482709_+\|membrane-protein	unknown	unknown	gnl\|CDD\|369290

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_024130919.1\|2493566_2494286_-\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.35322e-50
NZ_CP022073.1\|WP_058668054.1\|2497729_2499067_-\|fimbrial-usher-protein-StbD	gnl\|CDD\|185159	PRK15247, PRK15247, fimbrial usher protein StbD.	0
NZ_CP022073.1\|WP_058669118.1\|2496695_2496968_+\|N-acetyltransferase	gnl\|CDD\|225261	COG2388, COG2388, Predicted acetyltransferase [General function prediction only].	5.5914e-31
NZ_CP022073.1\|WP_049011223.1\|2491440_2492136_-\|lactate-utilization-protein-C	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	3.76424e-88
NZ_CP022073.1\|WP_070518326.1\|2496981_2497764_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185158	PRK15246, PRK15246, fimbrial assembly chaperone.	2.15786e-64
NZ_CP022073.1\|WP_012134992.1\|2489698_2490244_-\|isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235156	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase.	3.34553e-113
NZ_CP022073.1\|WP_047461459.1\|2496453_2496684_+\|hypothetical-protein	gnl\|CDD\|226120	COG3592, COG3592, Uncharacterized conserved protein [Function unknown].	6.23676e-42
NZ_CP022073.1\|WP_049008966.1\|2485073_2486807_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
NZ_CP022073.1\|WP_047461453.1\|2492128_2493556_-\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|129374	TIGR00273, Uncharacterized_electron_transport_protein_YkgF, iron-sulfur cluster-binding protein. Members of this family have a perfect 4Fe-4S binding motif C-x(2)-C-x(2)-C-x(3)-CP followed by either a perfect or imperfect (the first Cys replaced by Ser) second copy. Members probably bind two 4fe-4S iron-sulfur clusters. [Energy metabolism, Electron transport].	0
NZ_CP022073.1\|WP_058668059.1\|2480004_2480664_+\|hemolysin-III-family-protein	gnl\|CDD\|185044	PRK15087, PRK15087, hemolysin; Provisional.	1.00403e-137
NZ_CP022073.1\|WP_096753903.1\|2486893_2487992_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP022073.1\|WP_058668058.1\|2480817_2481798_-\|tRNA-modifying-protein-YgfZ	gnl\|CDD\|236567	PRK09559, PRK09559, putative global regulator; Reviewed.	0
NZ_CP022073.1\|WP_012134997.1\|2484354_2485068_+\|bifunctional-protein-disulfide-isomerase/oxidoreductase-DsbC	gnl\|CDD\|182802	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional.	1.17209e-178
NZ_CP022073.1\|WP_012134993.1\|2488001_2489519_+\|lysine--tRNA-ligase	gnl\|CDD\|171504	PRK12445, PRK12445, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP022073.1\|WP_024130922.1\|2482054_2482321_+\|FAD-assembly-factor-SdhE	gnl\|CDD\|182803	PRK10878, PRK10878, FAD assembly factor SdhE.	1.29505e-49
NZ_CP022073.1\|WP_058668057.1\|2490444_2491191_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	4.76399e-74
NZ_CP022073.1\|WP_012134999.1\|2482806_2483331_-\|flavodoxin-FldB	gnl\|CDD\|183471	PRK12359, PRK12359, flavodoxin FldB; Provisional.	3.12772e-128
NZ_CP022073.1\|WP_058668056.1\|2494778_2496332_+\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	1.19286e-116
NZ_CP022073.1\|WP_012134998.1\|2483434_2484331_+\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	0
NZ_CP022073.1\|WP_024130921.1\|2482301_2482709_+\|membrane-protein	gnl\|CDD\|369290	pfam07254, Cpta_toxin, Membrane-bound toxin component of toxin-antitoxin system. CptA is a family of bacterial proteins named for the member of this family, YGFX_ECOLI. YgfX was previously thought to be the toxic part of a toxin-antitoxin module along with the antitoxin, pfam03937 Sdh5. However, studies have shown that, YgfX interferes with correct cell division and morphology. Furthermore, the function of YgfX-SdhE as a TA system could not be demonstrated in either E. coli or Serratia sp. ATCC 39006. YgfX is predicted to have a short N-terminal cytoplasmic domain followed by two transmembrane helices (TMHs) separated by a short periplasmic loop and finally, a larger C-terminal cytoplasmic domain. The TMHs of YgfX are required for activity, but the sequence of the cytoplasmic 13 N-terminal amino acids is not essential. Furthermore, the amino acids W34 and D117 are not required for localization but are necessary for YgfX multimerization, interaction with SdhE, and YgfX activity. It is proposed that the formation of YgfX multimeric membrane-bound proteins are required to enable the interaction with the cytoplasmic SDH assembly factor SdhE. Another study has demonstrated that sdhEygfX (bicistronic operon) affects pig biosynthesis, directly or indirectly, at the level of transcription of the biosynthetic operon (pigA-O). It has also been suggested that, in addition to indirect transcriptional activation of pigA-O, YgfX might facilitate the formation of a terminal pig biosynthetic complex consisting of PigB and PigC.	1.22338e-57

>NZ_CP022073.1|WP_012134993.1|2488001_2489519_+|lysine--tRNA-ligase
MSEQHAQGADAVTDLNNELKTRREKLASLREQGIPFPNDFRRDHTSDQLHADFDAKENEELEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK
>NZ_CP022073.1|WP_096753903.1|2486893_2487992_+|peptide-chain-release-factor-2
MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLEDVSGLLELAVEADDEETFNEAVAELDTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL
>NZ_CP022073.1|WP_049008966.1|2485073_2486807_+|single-stranded-DNA-specific-exonuclease-RecJ
MKQQIQLRRREADETAELPADLPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKAVEILYNAFREGTRIVVVGDFDADGATSTALSVLGMRSLGCNNISYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHTGVEHARALGIPVVVTDHHLPGDTLPDAEAIINPNLRDCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGITPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRAGKCRPGIKALLEVSNRDPQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSRETLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEAQFEHFQQRFGELVTEWLDPSLLQGEVVSDGPLSVAEMTMEVAQLLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTACWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
>NZ_CP022073.1|WP_012134997.1|2484354_2485068_+|bifunctional-protein-disulfide-isomerase/oxidoreductase-DsbC
MKKRFMMFTLLAAAFSGMVHADDAAIRQSLTKLGVQSTEIQPAPVAGMKTVLTNSGVLYVTDDGKHIIQGPMYDVSGASPVNVTNQLLMKHLNALEKEMIVYKAPQEKHVITIFTDITCGYCHKLHEEMKDYNALGITVRYLAFPRQGLESQAEQDMKSIWCAKDRNKAFDEAMAGKGVKAATCDIDIANHYALGVQFGVSGTPAIVLSNGYVVPGYQGPKEMKAFLDAHQKQTSGK
>NZ_CP022073.1|WP_012134998.1|2483434_2484331_+|site-specific-tyrosine-recombinase-XerD
MDKDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVEWLHHRGKTLATVQSDDLQTLLAERMDGGYKATSSARLLSATRRFFQHLYREKFREDDPSAQLASPKLPQRLPKDLSEAQVERLLQSPVVDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
>NZ_CP022073.1|WP_012134999.1|2482806_2483331_-|flavodoxin-FldB
MNIGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPTLMEQYDVLILGIPTWDFGEIQEDWEAVWNQLDDLKLEGKIVALYGMGDQLGYGEWFLDALGMLHDKLVTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQAWCEQILGEMAEHYSC
>NZ_CP022073.1|WP_024130921.1|2482301_2482709_+|membrane-protein
MVLWQSDLRVSWRAQWLSLLIHGLVAALVLLMPWPLSYTPLWLILLSLVVFDCVRSQRRINTRQGEIKLLMDGRLRWQGQDWTIQGPPWMLKTGMMLRLRADSGKRQHLWLAADSMDDAEWRDLRRLMLQQATQG
>NZ_CP022073.1|WP_024130922.1|2482054_2482321_+|FAD-assembly-factor-SdhE
MDINNKARIHWACRRGMRELDISIMPFFEHEYDNLSDEEKCIFVRLLECDDPDLFNWLMNHGKPGDAELEQMVKLIQTRNRERGPVAI
>NZ_CP022073.1|WP_058668058.1|2480817_2481798_-|tRNA-modifying-protein-YgfZ
MAFTPFPPRQPSASARLPLTLITLDDWALASITGADSEKYMQGQVTADVNQLTEQQHLLVAHCDAKGKMWSNLRLFRDGDGFAWIERRSLREAQLTELKKYAVFSKVAIVPDDERVLLGIAGFQARAALANIFSELPNSEKQVVSEGASTLLWFEHPAERFLLITDVATAESLTEKLRGEAALNNSQQWLALDIEAGIPVIDSANSGQFIPQATNLQALGGISFKKGCYSGQEMVARAKFRGANKRALWSLAGKASRVPEAGEDLELQMGENWRRTGTVLAAVQLDDGQVLVQVVMNNDMEADSVFRVRDDANTLHIVPLPYSLEE
>NZ_CP022073.1|WP_058668059.1|2480004_2480664_+|hemolysin-III-family-protein
MVQKPLIAQGYSLAEEIANSISHGIGLVFGIVGLVLLLVQAVDANASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKIWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGMMIVIWSLALLGILFKLTIAHRFKVLSLVTYLTMGWLSLIVVYQLAIKLAAGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQV
>NZ_CP022073.1|WP_012134992.1|2489698_2490244_-|isopentenyl-diphosphate-Delta-isomerase
MTGEHVILLDEQGNPDGILEKYAAHTSDTLLHLAFSCWLFNAQGQLLVTRRSLSKKAWPGVWTNSVCGHPQQGESTEAAIIRRSRFELGVEITNLTPVYPDFRYRATDPNGIVENEVCPVYAAQVTSALQVNPDEVMDYQWSGLETVLQALSAAPWAFSPWMVLQASDDKARELLREYNQG
>NZ_CP022073.1|WP_058668057.1|2490444_2491191_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MSAGRLNNKSLSIVMLLCAGLLLAGCSSNQSSDSGSVYTVKRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGGAKRSGSSRATTAKSSTKTAAVRPSSSVPQSSWPPVGQRCWRWPASGKVILPYSTAEGGNKGIDISAARGTPIYAAGAGKVVYVGNQLRGYGNLIMIKHNEDYITAYAHNDTLLVNNGQSVKAGQKIATMGSTDADSVRLHFQIRYRATAIDPLRYLPPQGSKPKC
>NZ_CP022073.1|WP_049011223.1|2491440_2492136_-|lactate-utilization-protein-C
MDNRSAFLNTIAQALGRPLRFEPQADTLPVNNYANERLTELSQQQRCDAFIQFASDVMLVRCELTSEAQAPEAALRLCEELGHKSVVLSGDSRLVELGITERLQQECNAVVWDPTRGAENVTQAEQAKVGVVYAEYGLTESGGVVLFSAPERGRSLSLLPESSIFVLRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC
>NZ_CP022073.1|WP_047461453.1|2492128_2493556_-|iron-sulfur-cluster-binding-protein
MSIKTSDVEFKLRIRQQIEDPIMRKAVANAQERIGANRQKMVDELGHWDEWRDRASQIRDHVLSNLDAYLYQLTEKVTENGGHVYFAKTKEEATRYILQVAQSKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHKDRYQIRRVLHERLGYDGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGRSQVLGSEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEEGITPKAERRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKVGAIGDWMEARDLPDADGESFRSWFKKHQAEEKKNG
>NZ_CP022073.1|WP_024130919.1|2493566_2494286_-|(Fe-S)-binding-protein
MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQPAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLVDEPEWALRAEKVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLTRKLGVKEEPLTLLKNVRGLELLTFADQDTCCGFGGTFSVKMAEISGEMVKEKVLHLMDARPEYLIGADVSCLLNIGGRLQREGQPVKVMHIAEVLMSR
>NZ_CP022073.1|WP_058668056.1|2494778_2496332_+|L-lactate-permease
MNEYFMFALALSPLLLMVFLILKLKMPIHYSVLISLAFTAALSAIFWDMPVQNLKASMGYGALKGLWPIVIVILGAIFSYNVMQATKALDILRDILASISEDKRIQVLLISWCFGGFLEAAAGYGTAVAIPIGILIALGFNPLKAAIASLVANTVPTAFGAVGIPVSILAEQVNLPVYTLGGTIILQLALFNILLPFVIICIIGGGLKAIRGVFLITLLCGITTLVPQYFVAIHLGAELPAFAGSLVSLFAVAIASRLRKGKTDPEWRIEVSHTRETTPRSAKVLFRVGSIYLFIFVFILLCSPLFPTIKAAASQLASVLHFTLADGKTLALKVEWVTTPGMLIIFATIIGGFIQGASARGMLEVFVKTVFQLKNSIVAIMAIVALATVMDLSGIISTLAQSIVDLTGSSYVFLAPVIGALGTFVTGSDTNSNILFGKLQTIAASKLNIDPNWLAAANTSGATGGKMISPQSIAIAVSATKMEGQANQIMSGTMKYCCAYIVILGLKVGLFYYWFMT
>NZ_CP022073.1|WP_047461459.1|2496453_2496684_+|hypothetical-protein
MDQELLDAGYRAYTGEKIDVYFNTAICQHSGNCVRGSAKLFNLKRKPWIIPDEVDVATVVRVIDTCPSGALKYRQK
>NZ_CP022073.1|WP_058669118.1|2496695_2496968_+|N-acetyltransferase
MEILEGHNKFYVNDAAGNQVAEIVFVPTGEHLSIIEHTDVDPSLKGQGVGKQLVAKVVEKMREENRKVIPLCPFAKHEFDKTREYDDIRA
>NZ_CP022073.1|WP_070518326.1|2496981_2497764_-|fimbria/pilus-periplasmic-chaperone
MHSSRWWSVFSNWPTYTLLIVWTGWTAPPARAVVNTEVTRVIFNAGESHYSLALANSAQHPALVQIWTDEGDPLSQPAETITPIVAIPPVFKMQPTEIRTVKLQLAEKPGLARERESLYWLNIYQIPPMTVQDAKTRQKLVLPLRIRMKVFIRPQGVGPLREQDGERLTFTFQPQETQLYVNNPTPWYITLAALACDNTSATPLMIAPLSSQPLALSGKAGHCRTVRYELINDHGNRWVYEKPIINSGAPENTVGRNPRR
>NZ_CP022073.1|WP_058668054.1|2497729_2499067_-|fimbrial-usher-protein-StbD
MKIRQLFYGLLFSGMVAHPALSACIKVTSASPLSQAAKDAGYVGASWGGVGDGDVKGKLGLPGVITLSNGTGFQSEGTLLGSAAASFVPNGRTQGVTANQIMFRCTVSEIGQVYEYYATNGDDYWGGMVDVPGIDGAYYTYVKNVAVRLTNLKTGEYYSRYWKARAIPESEMFNDGTYIYIPASAFSDVFVELFRVDDSARGVDGSNRYTYPYAGPAGYIAFHGGGMSSGLFEGADSRTNYSGWGAAQWPGGWTLTSQTVFVRGAACRVNDYPAIVRLPPASVGELISGGSSQAPFSISVECETGALSGTTASTSLRAYVAMGFLVSNPTAANAASQLGLKTGSGAYTWLLDNHYGVNGVASGVGIRLYSDKQNGNALNLLPNRIATATGNAGGWYGYQDLTTQTASGSTSLYSGDFTASLEAIPGENVTAGTVYAQLQVVVSFQ

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Crispr_ID: NZ_CP022073_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_6

2517545-2517651

Orphan

Consensus_repeat	Method
CTTTGCCTGATGGCGCTACGCTTATCAGGCCTACAGACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_6

>merge|NZ_CP022073|6|2517545-2517651|CRISPRCasFinder
CTTTGCCTGATGGCGCTACGCTTATCAGGCCTACAGACGGTGCTATATCACAGGCCGGATAAGGCGTCTTTGCCTGATGGCGCTACGCTTATCAGGCCTACGGACGG

>NZ_CP022073|6|6|2517545-2517651|CRISPRCasFinder
CTTTGCCTGATGGCGCTACGCTTATCAGGCCTACAGACGG	TGCTATATCACAGGCCGGATAAGGCGT
CTTTGCCTGATGGCGCTACGCTTATCAGGCCTACGGACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058668044.1\|2516260_2517523_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|236867
NZ_CP022073.1\|WP_058668045.1\|2514521_2515214_+\|aspartate/glutamate-racemase	unknown	unknown	gnl\|CDD\|182300
NZ_CP022073.1\|WP_012134960.1\|2515200_2516136_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236819
NZ_CP022073.1\|WP_012134968.1\|2507824_2509054_-\|transporter	unknown	unknown	gnl\|CDD\|273283
NZ_CP022073.1\|WP_047461516.1\|2526430_2527123_-\|DNA-mismatch-repair-endonuclease-MutH	unknown	unknown	gnl\|CDD\|179923
NZ_CP022073.1\|WP_058668046.1\|2512312_2513149_+\|5-dehydro-4-deoxy-D-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|179169
NZ_CP022073.1\|WP_047461513.1\|2524113_2525154_-\|NADP(H)-dependent-aldo-keto-reductase	unknown	unknown	gnl\|CDD\|236727
NZ_CP022073.1\|WP_060815925.1\|2510740_2511919_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP022073.1\|WP_005123393.1\|2513205_2513967_+\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	unknown	unknown	gnl\|CDD\|181605
NZ_CP022073.1\|WP_012134945.1\|2528351_2530598_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|182937
NZ_CP022073.1\|WP_047461505.1\|2518734_2519763_-\|HTH-type-transcriptional-regulator-GalR	unknown	unknown	gnl\|CDD\|182681
NZ_CP022073.1\|WP_024130912.1\|2509195_2509651_-\|multidrug/biocide-efflux-PACE-transporter	unknown	unknown	gnl\|CDD\|226610
NZ_CP022073.1\|WP_049012027.1\|2525638_2526352_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP022073.1\|WP_058668042.1\|2520356_2522516_+\|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase	unknown	unknown	gnl\|CDD\|181207
NZ_CP022073.1\|WP_024130909.1\|2527807_2528338_+\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_CP022073.1\|WP_058668043.1\|2517701_2518721_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380494
NZ_CP022073.1\|WP_047461486.1\|2509754_2510633_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP022073.1\|WP_012134951.1\|2525273_2525492_-\|lipoprotein-YgdR	unknown	unknown	gnl\|CDD\|380215
NZ_CP022073.1\|WP_047461510.1\|2522508_2523705_+\|lysophospholipid-transporter-LplT	unknown	unknown	gnl\|CDD\|236879
NZ_CP022073.1\|WP_012134962.1\|2514052_2514379_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380366

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058668044.1\|2516260_2517523_+\|diaminopimelate-decarboxylase	gnl\|CDD\|236867	PRK11165, PRK11165, diaminopimelate decarboxylase; Provisional.	0
NZ_CP022073.1\|WP_058668045.1\|2514521_2515214_+\|aspartate/glutamate-racemase	gnl\|CDD\|182300	PRK10200, PRK10200, putative racemase; Provisional.	1.33714e-167
NZ_CP022073.1\|WP_012134960.1\|2515200_2516136_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|236819	PRK11013, PRK11013, DNA-binding transcriptional regulator LysR; Provisional.	0
NZ_CP022073.1\|WP_012134968.1\|2507824_2509054_-\|transporter	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	3.19068e-156
NZ_CP022073.1\|WP_047461516.1\|2526430_2527123_-\|DNA-mismatch-repair-endonuclease-MutH	gnl\|CDD\|179923	PRK05070, PRK05070, DNA mismatch repair protein; Provisional.	1.16938e-161
NZ_CP022073.1\|WP_058668046.1\|2512312_2513149_+\|5-dehydro-4-deoxy-D-glucuronate-isomerase	gnl\|CDD\|179169	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional.	0
NZ_CP022073.1\|WP_047461513.1\|2524113_2525154_-\|NADP(H)-dependent-aldo-keto-reductase	gnl\|CDD\|236727	PRK10625, tas, putative aldo-keto reductase; Provisional.	0
NZ_CP022073.1\|WP_060815925.1\|2510740_2511919_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP022073.1\|WP_005123393.1\|2513205_2513967_+\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	gnl\|CDD\|181605	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD.	0
NZ_CP022073.1\|WP_012134945.1\|2528351_2530598_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|182937	PRK11061, PRK11061, phosphoenolpyruvate--protein phosphotransferase.	0
NZ_CP022073.1\|WP_047461505.1\|2518734_2519763_-\|HTH-type-transcriptional-regulator-GalR	gnl\|CDD\|182681	PRK10727, PRK10727, HTH-type transcriptional regulator GalR.	0
NZ_CP022073.1\|WP_024130912.1\|2509195_2509651_-\|multidrug/biocide-efflux-PACE-transporter	gnl\|CDD\|226610	COG4125, COG4125, Predicted membrane protein [Function unknown].	4.68053e-67
NZ_CP022073.1\|WP_049012027.1\|2525638_2526352_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.1722e-77
NZ_CP022073.1\|WP_058668042.1\|2520356_2522516_+\|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase	gnl\|CDD\|181207	PRK08043, PRK08043, bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase.	0
NZ_CP022073.1\|WP_024130909.1\|2527807_2528338_+\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	1.18803e-104
NZ_CP022073.1\|WP_058668043.1\|2517701_2518721_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380494	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type 1 periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar binding of ABC-type transport systems.	8.63905e-127
NZ_CP022073.1\|WP_047461486.1\|2509754_2510633_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.35598e-42
NZ_CP022073.1\|WP_012134951.1\|2525273_2525492_-\|lipoprotein-YgdR	gnl\|CDD\|380215	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein. Members of this family are exclusively lipoproteins of small size, including YgdI and YgdR from E. coli K-12.	1.48728e-34
NZ_CP022073.1\|WP_047461510.1\|2522508_2523705_+\|lysophospholipid-transporter-LplT	gnl\|CDD\|236879	PRK11195, PRK11195, lysophospholipid transporter LplT; Provisional.	0
NZ_CP022073.1\|WP_012134962.1\|2514052_2514379_-\|cupin-domain-containing-protein	gnl\|CDD\|380366	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain. This family includes bacterial and archaeal pectin degradation protein KdgF that catalyzes the linearization of unsaturated uronates from both pectin and alginate, which are polysaccharides found in the cell walls of plants and brown algae, respectively, and represent an important source of carbon. These polysaccharides, mostly consisting of chains of uronates, can be metabolized by bacteria through a pathway of enzymatic steps to the key metabolite 2-keto-3-deoxygluconate (KDG). Pectin degradation is used by many plant-pathogenic bacteria during infection, and also, pectin and alginate can both represent abundant sources of carbohydrate for the production of biofuels. These proteins belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	2.72055e-54

>NZ_CP022073.1|WP_058668044.1|2516260_2517523_+|diaminopimelate-decarboxylase
MPHSLNCTDTDLSAENLLRLPAEFGCPVWVYDAQIIRRQIAALQQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYDPQNHPDDIVFTADVIDAATLARVSELRIPVNAGSVDMLDQLGQVSPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVMQRHRLQLVGVHMHIGSGVDYGHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYHEGEEAVDTQHYFGLWNAAREQIARHLGHRVKLEIEPGRFLVAQSGVLVTQVRSVKEMGRRHFVLVDAGFNDLMRPAMYGSYHHITALAADGRSLEHAPLLDTVVAGPLCESGDVFTQQEGGNVETRALPAVAPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGKARLIRRRQTIEELLALEVF
>NZ_CP022073.1|WP_012134960.1|2515200_2516136_-|LysR-family-transcriptional-regulator
MAAVNLRHIEIFHAVMTAGNLTEAARLLHTSQPTVSRELARFEKVLGLKLFERTRGRLHPTVQGLRLFEEVQRSWYGLDRIVNAAESLREFRQGELSIVCLPVFSQSFLPTLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTALLTLNEVCVLPPGHPLATKSVLTPGDFQGENYISLSRTDSYRQLLDALFNEHQVKRRMVVETHSAASVCAMVRAGAGLSVVNPLTALDYAASGVTVRRFSVDVPFTVSLIRPLHRPSSALVDAFSEHLQTSLPRLVDPLEAILEPVTKA
>NZ_CP022073.1|WP_058668045.1|2514521_2515214_+|aspartate/glutamate-racemase
MKTIGLLGGMSWESTIPYYRLINEGIKARLGGLHSASLLLHSVDFHEIEECQRQGEWDKTGDILAQAALGLQQAGAEAIVLCTNTMHKVAETIESRCSLPFLHIADATGRAIARKNMTRVALLGTRYTMEQDFYRGRLEQRFAIETLVPETDDRAQINQIIFDELCLGEFSERSRQYYLQVIERLAAQGAQGVIFGCTEIGLLVPEAQSALPVFDTAAIHAADAVEFMLS
>NZ_CP022073.1|WP_012134962.1|2514052_2514379_-|cupin-domain-containing-protein
MFIFHNETTLEDLGNGVTRRILAHDGNMMAVEVNFEKGAIGPLHNHPHEQLTYVLSGEFEFTIGEEKHVVRAGDTLYKRPNIMHGCVCLQPGTLLDTFTPVREDFLNA
>NZ_CP022073.1|WP_005123393.1|2513205_2513967_+|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD
MILNAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIERVTALGRRFLSLTADLRQIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIDFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTVAVDGGWLAR
>NZ_CP022073.1|WP_058668046.1|2512312_2513149_+|5-dehydro-4-deoxy-D-glucuronate-isomerase
MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDRIIVGGIMPVAKTVSVGGEVGKQLGVTYFLERRELGVINIGGPGTIAVDGQCYEIGHRDALYVGKGAKEVVFASVDGAKPAKFYYNCAPAHTTYPTKKVTPADVAPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMEENACVFHMMGQPQETRHIVMHNEQAVISPSWSIHSGVGTQAYTFIWGMVGENQVFDDMDHVAVKDLR
>NZ_CP022073.1|WP_060815925.1|2510740_2511919_+|acetyl-CoA-C-acetyltransferase
MKEVVIVGALRTPIGCFQGTLSRHSAVELGSMVVKALMERTGVDVHAIDEVILGQVLTAGAGQNPARQSAIKGGLPNTVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHMGVTAENLAREYGISRELQDAYALSSQQKARAAIDAGRFKAEIVPVVTQRNGQPVVVDTDEQPRTDASAEGLAQLNPAFDLLGSVTAGNASSINDGAAAVMMMSEAKAQELDLPILARIRAFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALAIERD
>NZ_CP022073.1|WP_047461486.1|2509754_2510633_+|LysR-family-transcriptional-regulator
MRYSPEALIAFVETVSCGSFSAAARRLRKSQSTVSTAIAHLEADLGFSLFDRSSRQPVLTEEGKRVLSYVQAILSASDRLDEVALSLSGETETRLTFVLSDTLHPDVLEELMVQFDRQFPHTEFECLIGEDEDVIDLLQKGRAQVGLIEARNHYPTEMGVTRLPMQTWMGLYVAASHPLAAQKTLQWDQLHTWRELRLNTYLESGASVARGPAWSAPNYLLLLSMAVQGFGWCALPCALVEEFAAEKPLVQLDVPGWPKAISIDLLWNKKSPPGAAGSWLRDHLQQGRIPAD
>NZ_CP022073.1|WP_024130912.1|2509195_2509651_-|multidrug/biocide-efflux-PACE-transporter
MQHDLVQRRSLLERIFHAVCFEGIATAILAPTTAWLMQRSVLEMGGLTILLATTAMIWNIIYNALFDRFWPSHVVTRTAKVRALHALGFESGFIVIGVSIVAWALNVSLLQAFTLEIGFFLFFLPYTMFYNWAYDTLRLRVVRRRQQRVTA
>NZ_CP022073.1|WP_012134968.1|2507824_2509054_-|transporter
MSKIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGSLITSLYFIAFFVVVLIYAVAITNSLTEQLAKQMTIDLRVRVLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSLYLTGSWQPALLTSQMSFDRHTLHQVWISIPVMVFAFSHTPIISTFAIDRRERYGEQAMGKCKKIMKVAYLIICLSVLFFVFSCLLSIPPSYIEAAKHEGVTILSALSMMPAAPAWLSISGIIVAVIAMSKSFLGTYFGVIEGATEIVRTALLQTGVKKSRAFNRALSIMLVSLITFVVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPYRSLGNLLTLIVGLLCVSVMFFG
>NZ_CP022073.1|WP_058668043.1|2517701_2518721_-|LacI-family-DNA-binding-transcriptional-regulator
MTTMLDVSRRAGVSKATVSRVLNGTGQVKESTRQKVFKAMQALDYRPNFLARSLANRTSNSIGLVVSTFDGFYFGRLLQQASRQTESHGKQLIVTDGHDTPEREQEAVQMLADRQCDAIILYTRYMSEKTIISLINTIETPLVVINRDVSLARDRAIFFEQEDAAFQAVDYLISQGHRDIACITVPNHTPTGKSRLTGYRKALEKNGIAWDPAKVKYGDSSMTRGYEACRELLEDGIAFTALFACNDDMALGASKALHQAGLRIPQDISLFGFDDAPSAKWLEPALSTVYLPIDSMITTAIDQAIRLASGEELEPIPPFTGTLVLRDSVTTGPFFQSDC
>NZ_CP022073.1|WP_047461505.1|2518734_2519763_-|HTH-type-transcriptional-regulator-GalR
MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLSYHPNANARALAQQSTETIGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFEQRCVALDDRYGAWLATRHLIQQGHTRIGYICSNHSISDAEDRLKGYYDALEESHIPANDRLVTFGEPDESGGEQAMTELLGRGRNFTAIACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAAELALALAEKRPVPEITHVFSPTLVRRHSVSTPSETGNSSSND
>NZ_CP022073.1|WP_058668042.1|2520356_2522516_+|bifunctional-acyl-ACP--phospholipid-O-acyltransferase/long-chain-fatty-acid--ACP-ligase
MLFGFFRNLFRVLYRVRVTGDARALQGERILITPNHVSFIDGILLALFLPVRPVFAVYSSISQQWYMRWLKSLIDFVPLDPTKPMAIKHLVRLVEQGRPVVIFPEGRISVSGSLMKIYDGAGFVAAKSGATVVPVRIEGAELTHFSRLKGLVKQRFFPRIHLHILPPTHLPMPEAPRARERRKLAGEMLHQIMMEARMAVRPRETLYESLLAAQYRYGAGKNCVEDINFTPDTYRKLLTKTLFVGRILEKYSAQGENIGLMLPNAAISAAVIFGAVSRGRIPAMMNYTAGVKGLTSAITAAEIKTVFTSRQFLEKGKLWHLPEQLTQVRWIYLEDLKADVTLADKLWIFAHLLMPRLAQVKQRPEEAAMILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTANDRFMSALPLFHSFGLTVGLLTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFYRLRYVVAGAEKLQDSTRQLWQDKFGLRVLEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLAVPGIDDGGRLQLKGPNIMNGYLRVEKPGVLEAPAAENALGDVEQGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKMHATAIKSDASKGEALVLFTTDSELTRESLLQYARTHGIPELAVPRDIRYLKQLPLLGSGKPDFVTLKSWVDEPEKQHA
>NZ_CP022073.1|WP_047461510.1|2522508_2523705_+|lysophospholipid-transporter-LplT
MRESVHTNTSIWSKGMMSVIAAQFLSAFGDNALLFATLALLKAQFYPDWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGFNPFVGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMEASTIAAILLGSVAGGVLADWHVIAALVACALAYAGAVVANLFIPKLAAARPGQSWHLRKMVRSFFCACMSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVARCMPAGILIGVVVLIFSLQHALLPAYALLTLIGVLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGLYSLAVLVGIPVVAIGIGFGGLFALAIAALWIWQRRQM
>NZ_CP022073.1|WP_047461513.1|2524113_2525154_-|NADP(H)-dependent-aldo-keto-reductase
MHYHRIPHSSLEISTLGLGTMTFGEQNSEADAHAQLDYAVDQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLVIASKVSGPSRNNDSGIRPNQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPVVTLLETLDALTEFQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSYEVGLAEVSQYEGVELLAYSCLAFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQAQKAVAAYVDIARRHNLDPAQMALAFVRRQPFVASTLLGATTMAQLKTNVESLHLELSEEVLAEIEAVHQVYTYPAP
>NZ_CP022073.1|WP_012134951.1|2525273_2525492_-|lipoprotein-YgdR
MKKWAVVISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDEVSQIIER
>NZ_CP022073.1|WP_049012027.1|2525638_2526352_-|TerC-family-protein
MLFAWVTDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRNHARRLGLAAAMVMRLALLASIAWVTRLTNPLFEVFGEAISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKTRVSSFLGAIVQIMMLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARPIGEFVDRHPSVKMLALSFLILVGFTLILESFDVHVPKGYIYFAMFFSIAVESLNLMRNKKNPL
>NZ_CP022073.1|WP_047461516.1|2526430_2527123_-|DNA-mismatch-repair-endonuclease-MutH
MPGLRPLLSPPASEALLLAQAQQLSGYSLGELAALAGLVAPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLADRRVGSPLLWSPNEEEDQQLRLDWEELMDMIVLGQVERITARHGEFLQLRPKAANAKALTEAIGAQGETILTLPRGFYLKKNFTRTLLARHFLLQG
>NZ_CP022073.1|WP_024130909.1|2527807_2528338_+|RNA-pyrophosphohydrolase
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINSGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMSADAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQESTPKPQNAPAWRRKRG
>NZ_CP022073.1|WP_012134945.1|2528351_2530598_+|phosphoenolpyruvate--protein-phosphotransferase
MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQTQLTALFGQYRHTRIRALPAAPGVAIAEGWQDATLPLMEQVYEASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKVIEKFAEQFAALTDGYLKERAGDLRALGQRLLFHLDDTIQGPNTWPERFVLVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHHRTLVVDGYRGELLVDPEPVLLQEYQRLISEENELSRLAEDDVNLPAHLKSGERVKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVTSIDEVDEARRLIERAGREVEEMIGYAIPRPRIGIMLEVPSMVFMLPQLANRVDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPGMLRALAMIAQEAEKQGLDLRLCGEMAGDPMCVAILIGLGFRHLSMNGRSVARVKYLLRHIDYEDAQTLAQRSLEAQMATEVRHQVAAFMERRGMGGLIRGGL

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Crispr_ID: NZ_CP022073_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_7

2622729-2622863

Orphan

Consensus_repeat	Method
CGCCTTATCCGGCCTACTTATTGTGATGCTTCTTGTAGGCCCGGTAAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_7

>merge|NZ_CP022073|7|2622729-2622863|CRISPRCasFinder
CGCCTTATCCGGCCTACTTATTGTGATGCTTCTTGTAGGCCCGGTAAGCGCAGCGCCACCGGGCGTTGTGCCGGATGGCGGCTGGCGCCTTATCCGGCCTACGTATTGTGATGCTTCTTGTAGGCCCGGTAAGCG

>NZ_CP022073|7|7|2622729-2622863|CRISPRCasFinder
CGCCTTATCCGGCCTACTTATTGTGATGCTTCTTGTAGGCCCGGTAAGCG	CAGCGCCACCGGGCGTTGTGCCGGATGGCGGCTGG
CGCCTTATCCGGCCTACGTATTGTGATGCTTCTTGTAGGCCCGGTAAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_024130896.1\|2629215_2629560_+\|nitrous-oxide-stimulated-promoter-family-protein	unknown	unknown	gnl\|CDD\|371708
NZ_CP022073.1\|WP_012134862.1\|2614501_2614981_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP022073.1\|WP_058668015.1\|2614977_2616027_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP022073.1\|WP_012134848.1\|2626435_2627296_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	unknown	unknown	gnl\|CDD\|334323
NZ_CP022073.1\|WP_012134859.1\|2616762_2617389_+\|protein-L-isoaspartate-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP022073.1\|WP_058668011.1\|2627292_2628114_-\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	unknown	unknown	gnl\|CDD\|185016
NZ_CP022073.1\|WP_012134860.1\|2616007_2616769_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP022073.1\|WP_058668014.1\|2619865_2620270_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP022073.1\|WP_060816201.1\|2621030_2622458_+\|UbiD-family-decarboxylase	unknown	unknown	gnl\|CDD\|223121
NZ_CP022073.1\|WP_058668009.1\|2630109_2632188_-\|formate-hydrogenlyase-transcriptional-activator-FlhA	unknown	unknown	gnl\|CDD\|237965
NZ_CP022073.1\|WP_012134852.1\|2622468_2622705_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_047461652.1\|2628110_2629028_-\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	unknown	unknown	gnl\|CDD\|238557
NZ_CP022073.1\|WP_000081498.1\|2618717_2619710_+\|RNA-polymerase-sigma-factor-RpoS	unknown	unknown	gnl\|CDD\|235548
NZ_CP022073.1\|WP_058668013.1\|2620437_2621031_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241
NZ_CP022073.1\|WP_058668012.1\|2625596_2626445_-\|iron/manganese-ABC-transporter-permease-subunit-SitD	unknown	unknown	gnl\|CDD\|224033
NZ_CP022073.1\|WP_047461655.1\|2632663_2633674_-\|hydrogenase-expression/formation-protein-HypE	unknown	unknown	gnl\|CDD\|273984
NZ_CP022073.1\|WP_012134844.1\|2629636_2630065_-\|transporter	unknown	unknown	gnl\|CDD\|182640
NZ_CP022073.1\|WP_024130899.1\|2617527_2618655_+\|murein-hydrolase-activator-NlpD	unknown	unknown	gnl\|CDD\|236782
NZ_CP022073.1\|WP_012134841.1\|2633670_2634792_-\|hydrogenase-formation-protein-HypD	unknown	unknown	gnl\|CDD\|237892
NZ_CP022073.1\|WP_012134851.1\|2622886_2625448_-\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_024130896.1\|2629215_2629560_+\|nitrous-oxide-stimulated-promoter-family-protein	gnl\|CDD\|371708	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter. The function of ygaB is not known but it is a promoter that is stimulated by the presence of nitrous oxide. It is regulated by the gene-product of the bacterial nsrR gene.	9.54956e-51
NZ_CP022073.1\|WP_012134862.1\|2614501_2614981_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.22709e-103
NZ_CP022073.1\|WP_058668015.1\|2614977_2616027_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP022073.1\|WP_012134848.1\|2626435_2627296_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	4.68144e-82
NZ_CP022073.1\|WP_012134859.1\|2616762_2617389_+\|protein-L-isoaspartate-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	2.46732e-128
NZ_CP022073.1\|WP_058668011.1\|2627292_2628114_-\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	gnl\|CDD\|185016	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein.	0
NZ_CP022073.1\|WP_012134860.1\|2616007_2616769_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	8.26076e-149
NZ_CP022073.1\|WP_058668012.1\|2625596_2626445_-\|iron/manganese-ABC-transporter-permease-subunit-SitD	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.84632e-73
NZ_CP022073.1\|WP_058668014.1\|2619865_2620270_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.67989e-18
NZ_CP022073.1\|WP_060816201.1\|2621030_2622458_+\|UbiD-family-decarboxylase	gnl\|CDD\|223121	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism].	1.40298e-170
NZ_CP022073.1\|WP_058668009.1\|2630109_2632188_-\|formate-hydrogenlyase-transcriptional-activator-FlhA	gnl\|CDD\|237965	PRK15429, PRK15429, formate hydrogenlyase transcriptional activator FlhA.	0
NZ_CP022073.1\|WP_047461652.1\|2628110_2629028_-\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	gnl\|CDD\|238557	cd01137, PsaA, Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	1.16793e-144
NZ_CP022073.1\|WP_000081498.1\|2618717_2619710_+\|RNA-polymerase-sigma-factor-RpoS	gnl\|CDD\|235548	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated.	0
NZ_CP022073.1\|WP_058668013.1\|2620437_2621031_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	1.02976e-109
NZ_CP022073.1\|WP_047461655.1\|2632663_2633674_-\|hydrogenase-expression/formation-protein-HypE	gnl\|CDD\|273984	TIGR02124, Hydrogenase_expression/formation_protein_HypE, hydrogenase expression/formation protein HypE. This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes.	5.27717e-173
NZ_CP022073.1\|WP_012134844.1\|2629636_2630065_-\|transporter	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	2.44113e-22
NZ_CP022073.1\|WP_024130899.1\|2617527_2618655_+\|murein-hydrolase-activator-NlpD	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	0
NZ_CP022073.1\|WP_012134841.1\|2633670_2634792_-\|hydrogenase-formation-protein-HypD	gnl\|CDD\|237892	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional.	0
NZ_CP022073.1\|WP_012134851.1\|2622886_2625448_-\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0

>NZ_CP022073.1|WP_012134852.1|2622468_2622705_+|hypothetical-protein
MICPRCADEHIELMATSPVKGIWTVYQCQHCLYTWRDTEPLRRTSREHYPQAFRMTQKDIDQAPMVPGIPPLLAEDKR
>NZ_CP022073.1|WP_060816201.1|2621030_2622458_+|UbiD-family-decarboxylase
MAFDDLRSFLQALDEQGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDTFPVAPERRVNPAWAENTVDGEAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDHFGKQNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVCDLPETKAWAEKLTAMLTNRK
>NZ_CP022073.1|WP_058668013.1|2620437_2621031_+|UbiX-family-flavin-prenyltransferase
MRLIVGMTGATGAPLGIALLQALRQMPTVETHLVMSKWAKTTIELETPYSARDVAGLADYCHNPADQAATISSGSFRTDGMIIIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNYPQTIDDITQHIVARVLDQFGLEHPHARRWQGLQQAQNFSQENE
>NZ_CP022073.1|WP_058668014.1|2619865_2620270_-|MarR-family-transcriptional-regulator
MELRNTAFHLLRQLFQQHTSRWQHELPELTKPQYAVMRAIAEHPGIEQIALMEAAVSTKATLAEMLSRMESRGLVTRESDPQDKRRRFVYLTGEGETLLTGAMPLGDRVDDEFLGRLSDDERKQFTQLVRKMMG
>NZ_CP022073.1|WP_000081498.1|2618717_2619710_+|RNA-polymerase-sigma-factor-RpoS
MSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
>NZ_CP022073.1|WP_024130899.1|2617527_2618655_+|murein-hydrolase-activator-NlpD
MSAGSPKFTVSRIAALSLVSLWLAGCSNSSNPPAPVSSVNGNAPSSTSSGMLITPPPKMGTTAQQTPQIQPVQPVQPVAQSRQIQPVAEQPVQMENGRIVYNRQYGNIPKGSYTGGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNVPAPYGLNVGQTLQVGNASGTPITGGNAITQADAVEQGVVTKPAQNSTVVVASKPTITYSEDSGEQSANKMLPNNKPAGTVVTAPVTAPTASTTEPTASSTSTSSPISTWRWPTEGKVIENFAATEGGNKGIDIAGSKGQAIVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR
>NZ_CP022073.1|WP_012134859.1|2616762_2617389_+|protein-L-isoaspartate-O-methyltransferase
MVSRRVHTLLEQLRAQGIKDEQVLDALAAVPREKFIDEAFEHKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA
>NZ_CP022073.1|WP_012134860.1|2616007_2616769_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHQHYETAAAVTCSILRALRREPLRTGRILNINVPDLPLDQIKGIRVTRCGSRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPDTDFAAVDEGYVSVTPLHVDLTAYSAHDVVSDWLDSVGVDAQW
>NZ_CP022073.1|WP_058668015.1|2614977_2616027_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFENLTYLHGKPQGAGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQIEGCKVLEYARHKRKLRLGALKGNAFTLVLREVSHRDDVEARLQAINTRGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVNERVKKPDFNQVVDGDALQLAGRGSWFVATQEEQAELQRRVDEKELMITAALPGSGEWGTLRDALAFEEAAIADESELQSLLLREKVEAARRAMLLYPQQLRWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP022073.1|WP_012134862.1|2614501_2614981_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYDKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKAAK
>NZ_CP022073.1|WP_012134851.1|2622886_2625448_-|DNA-mismatch-repair-protein-MutS
MSTIDNLDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDARRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGYGYATLDISSGRFRLSEPVDRETMAAELQRTNPAELLYAEDFAEMALIDGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLIGFGVENAPRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTKTLIERQQTIGALQDVTSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVTSAPVQNLREKMGEFTELRDLLERAIIDAPPVLVRDGGVIAPGYNEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLAELQQSANALAELDVLVNLAERAYTLNYTCPTFSDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESLSPNAAATQVDGTQMSLLSVAEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
>NZ_CP022073.1|WP_058668012.1|2625596_2626445_-|iron/manganese-ABC-transporter-permease-subunit-SitD
MRLTALLEPFQFDFMINALMVSAIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGIVLAYIAGIPLAIGAFIAGLFCAVATGYLDDNSRIKRDTIMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSISDILQTALIALGIALIIGLKWKDFLLHAFDPHQAKASGLNTSLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALMLAVTLSVVTSFLGVYLSFFLDSAPAPTIVVLFTAIFIVAFIYATLRERRSEMRLKQQL
>NZ_CP022073.1|WP_012134848.1|2626435_2627296_-|iron/manganese-ABC-transporter-permease-subunit-SitC
MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPMSVNIQTIILGNVLAIAPEDILQLAIIGTVSLVILLLKWKDLMVTFFDENHARSIGLNPARLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLTIAVAIGSLTSFFGAWLSYWLDGATGGIIVVLQTLLFLLAFIFAPKHGLLANRRRARLNKETPCA
>NZ_CP022073.1|WP_058668011.1|2627292_2628114_-|iron/manganese-ABC-transporter-ATP-binding-protein-SitB
MSQSAITVDRVTVTYRNGHTALRDTTFQVPGGSIAALVGVNGSGKSTLFKALMGFVRLAKGEIAILQQPVNKALKQNLIAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPSARDRESVDAALARVDMLEYRYRQIGELSGGQKKRVFLARAIAQDGQVILLDEPFTGVDVKTEARIIALLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAENLELAFSGVLRHVALSGGEEHIITDDERPFISRRAAGGGESS
>NZ_CP022073.1|WP_047461652.1|2628110_2629028_-|iron/manganese-ABC-transporter-substrate-binding-protein-SitA
MPHLLRLKSILLASALAMLALSPAYAKDKFKVITTFTVIADMAKNVAGDAADVSSITKPGAEIHEYQPTPGDIKRAQGAQLILSNGLNLELWFARFYQHLSGVPEVTVSNGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAATYQKNAENYKAQIRQTLDPLRDALAKIPADKRWLVTSEGAFSYLARDNDLKELYLWPINADQQGTPKQVRKVIDAIREHHIPAVFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVSGITDGLRSQK
>NZ_CP022073.1|WP_024130896.1|2629215_2629560_+|nitrous-oxide-stimulated-promoter-family-protein
MSGKRIAREKLTIKKMIALYESQCPQASNEQGHYDALFAYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTIRHLIDDKRPVPELPEKYQRKK
>NZ_CP022073.1|WP_012134844.1|2629636_2630065_-|transporter
MAVSARNQLTGTVSAVATGAVNDEVELTLAGGAKLVAIVTHSSQQALGLTNGKDAIALIKAPWVTLASEDCGLKFSARNQFAGSVSQVTEGAVNATVHIKTDAGFEIVAVVTNESQEEMKLAQGSRVIALIKASAILIATKA
>NZ_CP022073.1|WP_058668009.1|2630109_2632188_-|formate-hydrogenlyase-transcriptional-activator-FlhA
MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKHSALADSAAIVLWQPQTQRARYYATRENGKPVAYEDETVLAHGPVRRILSRPDALHCNHHEFSETWPQLATNGLYGEFGHYCLLPLAAEGRIFGGCEFIRQNDQPWSEKEYERLQTFTQIVAVVAEQIQCRVSNNVDYDLLCRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAISIVLHSSRKNKLSIYSTHYLDEHNPAHEQSEVDEAGTLSERVFKSKEMLLINLNERDTLAPYERMLFDTWGNQIQTLCLLPLMSGNTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNARRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNINSIPAETLRTLSNMEWPGNVRELENVVERAVLLTRGNVLQLSLPDMGMLTPGAPPVATEVAQEGEDEFQLIMRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKDALV
>NZ_CP022073.1|WP_047461655.1|2632663_2633674_-|hydrogenase-expression/formation-protein-HypE
MNSVQLAHGSGGLAMQQLINSLFMEAFANPWLAEQEDQARLELAQLAAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKSVVNSMAATAREAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWGAQTLSVGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVAHEFAAACGFGIELSESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERQAADAVLDALRAHPLGRDAAPIGEVVERRGVRLAGLYGVKRTLDLPHAEPLPRIC
>NZ_CP022073.1|WP_012134841.1|2633670_2634792_-|hydrogenase-formation-protein-HypD
MRFVDEYRAPEQVMQLIDHLRERAAHLPYTAERPLRIMEVCGGHTHAIFKFGLDQLLPDNVEFIHGPGCPVCVLPMGRIDSCVEIASHPEVIFCTFGDAIRVPGKQGSLLQAKARGADIRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKLRNVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYSFIATDFHRPLVVAGFEPLDLLQGVVMLVEQKIASHSQVENQYRRVVPDAGNLLAQQAIAEVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGTTCNPQTAFGALMVSSEGACAAWYQYRQQECEA

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Crispr_ID: NZ_CP022073_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_8

2732279-2732388

Orphan

Consensus_repeat	Method
CTGTAGGCCGGATAAGGCGGTTACGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_8

>merge|NZ_CP022073|8|2732279-2732388|CRISPRCasFinder
CTGTAGGCCGGATAAGGCGGTTACGCCGCCATCCGGCGTAATGCCCGGTGGCGCTGCGCTTACCGGGCCTACAATGTGCTCCCTGTAGGCCGGATAAGGCGGTTACGCCG

>NZ_CP022073|8|8|2732279-2732388|CRISPRCasFinder
CTGTAGGCCGGATAAGGCGGTTACGCCG	CCATCCGGCGTAATGCCCGGTGGCGCTGCGCTTACCGGGCCTACAATGTGCTCC
CTGTAGGCCGGATAAGGCGGTTACGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_012134737.1\|2736118_2736661_-\|acireductone-dioxygenase	unknown	unknown	gnl\|CDD\|224704
NZ_CP022073.1\|WP_047461815.1\|2739756_2739996_-\|DinI-family-protein	unknown	unknown	gnl\|CDD\|368780
NZ_CP022073.1\|WP_047461812.1\|2739520_2739760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_047463951.1\|2728657_2730160_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP022073.1\|WP_058667982.1\|2735045_2736074_+\|S-methyl-5-thioribose-1-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273112
NZ_CP022073.1\|WP_058667983.1\|2733740_2734940_-\|S-methyl-5-thioribose-kinase	unknown	unknown	gnl\|CDD\|236561
NZ_CP022073.1\|WP_047461798.1\|2730156_2731152_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP022073.1\|WP_060815943.1\|2731172_2732237_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
NZ_CP022073.1\|WP_047461790.1\|2722917_2724822_+\|5-dehydro-2-deoxygluconokinase	unknown	unknown	gnl\|CDD\|378281
NZ_CP022073.1\|WP_049011882.1\|2732408_2733650_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227601
NZ_CP022073.1\|WP_058667980.1\|2738560_2739175_-\|YagU-family-protein	unknown	unknown	gnl\|CDD\|226008
NZ_CP022073.1\|WP_012134708.1\|2740776_2741259_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP022073.1\|WP_058667986.1\|2724837_2725728_+\|myo-inosose-2-dehydratase	unknown	unknown	gnl\|CDD\|275172
NZ_CP022073.1\|WP_058667984.1\|2726610_2728152_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP022073.1\|WP_047461785.1\|2720732_2721761_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP022073.1\|WP_058667987.1\|2721771_2722905_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP022073.1\|WP_058667985.1\|2725737_2726553_+\|5-deoxy-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|226241
NZ_CP022073.1\|WP_058667981.1\|2736657_2737347_-\|acireductone-synthase	unknown	unknown	gnl\|CDD\|319768
NZ_CP022073.1\|WP_047461783.1\|2719173_2720721_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP022073.1\|WP_047461809.1\|2737343_2737958_-\|methylthioribulose-1-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|236415

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_012134737.1\|2736118_2736661_-\|acireductone-dioxygenase	gnl\|CDD\|224704	COG1791, COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown].	7.89556e-66
NZ_CP022073.1\|WP_047461815.1\|2739756_2739996_-\|DinI-family-protein	gnl\|CDD\|368780	pfam06183, DinI, DinI-like family. This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity. The structure of DinI is known.	5.36171e-24
NZ_CP022073.1\|WP_047463951.1\|2728657_2730160_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP022073.1\|WP_058667982.1\|2735045_2736074_+\|S-methyl-5-thioribose-1-phosphate-isomerase	gnl\|CDD\|273112	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase. The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA. [Amino acid biosynthesis, Aspartate family].	3.51051e-146
NZ_CP022073.1\|WP_058667983.1\|2733740_2734940_-\|S-methyl-5-thioribose-kinase	gnl\|CDD\|236561	PRK09550, mtnK, methylthioribose kinase; Reviewed.	0
NZ_CP022073.1\|WP_047461798.1\|2730156_2731152_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	2.05474e-67
NZ_CP022073.1\|WP_060815943.1\|2731172_2732237_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	1.60795e-123
NZ_CP022073.1\|WP_047461790.1\|2722917_2724822_+\|5-dehydro-2-deoxygluconokinase	gnl\|CDD\|378281	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090). This domain, found in various prokaryotic carbohydrate kinases, has no known function.	0
NZ_CP022073.1\|WP_049011882.1\|2732408_2733650_+\|hypothetical-protein	gnl\|CDD\|227601	COG5276, COG5276, Uncharacterized conserved protein [Function unknown].	3.20212e-153
NZ_CP022073.1\|WP_058667980.1\|2738560_2739175_-\|YagU-family-protein	gnl\|CDD\|226008	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown].	3.54863e-77
NZ_CP022073.1\|WP_012134708.1\|2740776_2741259_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	7.73009e-89
NZ_CP022073.1\|WP_058667986.1\|2724837_2725728_+\|myo-inosose-2-dehydratase	gnl\|CDD\|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	6.85702e-171
NZ_CP022073.1\|WP_058667984.1\|2726610_2728152_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	7.29056e-67
NZ_CP022073.1\|WP_047461785.1\|2720732_2721761_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	2.5474e-98
NZ_CP022073.1\|WP_058667987.1\|2721771_2722905_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.18419e-74
NZ_CP022073.1\|WP_058667985.1\|2725737_2726553_+\|5-deoxy-glucuronate-isomerase	gnl\|CDD\|226241	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism].	7.24537e-157
NZ_CP022073.1\|WP_058667981.1\|2736657_2737347_-\|acireductone-synthase	gnl\|CDD\|319768	cd01629, HAD_EP, Enolase-phosphatase similar to human enolase-phosphatase E1 and and Xanthomonas oryzae pv. Oryzae enolase-phosphatase Xep. Enolase-phosphatase E1 (also called MASA) is a bifunctional enolase- phosphatase which promotes the conversion of 2,3-diketo-5-methylthio-1-phosphopentane to 1,2-dihydroxy-3-keto-5-methylthiopentene anion (an aci-reductone) in the methionine salvage pathway. The catalytic reaction is carried out continuously by enolization and dephosphorylation, and the enolase activity cannot be classified as typical enzymatic enolization. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.53275e-116
NZ_CP022073.1\|WP_047461783.1\|2719173_2720721_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP022073.1\|WP_047461809.1\|2737343_2737958_-\|methylthioribulose-1-phosphate-dehydratase	gnl\|CDD\|236415	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase.	4.00386e-141

>NZ_CP022073.1|WP_060815943.1|2731172_2732237_+|sugar-ABC-transporter-substrate-binding-protein
MKKTALSLLALGLLSSLPGYAATPAPVPAAIAGHNGPVRIAVIRNLGSDDNTTQFVAGAIQEGKKLGFKVSTFLSNGDDAKFQDFVNQAISQKYDGIILSQGRDPYSTALVKKAVDAGIKVAVFDTAVNGEIPGVTVTQQDDASLTHLSFGQLVKDFNGKANIIKLWVAGFPPMERRQAAYQQMLKDNPGIKELESIGAVSSDVQGDTANKVGAVLAKYPKGKIDAIWGTWDAFSQGAYKALKENGRTEIKLYSIDISNQDLQLMREAGSPWKVSVAVDPKLIGATNVRLIANKIAGEPTPATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFIAPWFATLEAKNK
>NZ_CP022073.1|WP_047461798.1|2730156_2731152_+|ABC-transporter-permease
MSKALSVNAAASGRQQIFDFLYKWGMLLTVVALIAIFGVASDNFLDPFNIINILRSIAIVTVIAIGVSISLTVGGFDLSVGSTASLANALVISLFVWHGFGTTGAIVITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGLIPAAFGALGQVPTIVVVMLVVTLAAQLALSLTTHGRRMYAIGGNPEAARLSGIRTTRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMDAVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAAALAITYIQKR
>NZ_CP022073.1|WP_047463951.1|2728657_2730160_+|sugar-ABC-transporter-ATP-binding-protein
MLSSRLDMRGISLAFSGFQALSRVDFTLTGGSVHALTGANGAGKSTLMAVLCGTHDHYEGEIAINNQPVPIREPLDAKRLGIHLVQQEVDVALIPGLSIAENIMLDQLAQPGHRYRWRAIRQQARDALAQLDVHLDVRRVIDGCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESERLFAVVKRLQQQGIGVVFISHRIHELKAICDTLTVLRDGKLIESGPMAELSADAIVEKMLGHELNDIYPPKRPPHADETLLRVEGLHDERLLKNISLHLHKGEILGIAGLAGAGKTELCKALFGASKSRVERGELNHQPWTPRDPVDSVTRGLALVPEERRKEGIFIDESVAMNLAVAADNRFSRWSLFGHRQAWRWAEAVIARVGVRARGPGQVLRRLSGGNQQKVAIGKWLRGDARVLIFDEPTKGVDVKAKTDLFALIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEVEGAQAREETLLYYSTGGTAL
>NZ_CP022073.1|WP_058667984.1|2726610_2728152_-|methyl-accepting-chemotaxis-protein
MKNNTTVTQKEYLLNNKTTLLSTTDKDSHITYANSAFIDASGFNETQLMGKPHNIIRHPDMPSAAFADMWHTILQGDSWTGLVKNRRQNGDHYWVRANVTPVWQNEKLTGYISVRTVPSRDEVSHSEQLYQKINNNGIKGFRLFKGIIIRRGALSWLSMFKWLSVSQRVNYALAITSLAALLFIFLPVPPAIQGGSIIVLFLLLAIYLKVQICQPVNTLLVQMKKVVSGRKPDNCHLQRVDEIGMLMRLVNQSGLNLRSLVDDVSTQISGIQAISQRVSQEGTALQSRSEETSADLQQTAAAIEEIGSAVQQTADTAAQTMTMADSTSANATEGGHIMKQTITMMQAISRDNSQIVDIIGVIDSIAFQTNILALNAAVEAARAGESGRGFAVVAAEVRNLAQHSASAAKEIKQLIEKNVTNVNTGVQMVEQTETHLTGMIDDVLQMSTMIKEISLATREQTLALEQINNSISRIGSMTDNNAEMVEQVTDAAGDLTGRASRLQQAVQVFGASR
>NZ_CP022073.1|WP_058667985.1|2725737_2726553_+|5-deoxy-glucuronate-isomerase
MSRLLSRWQQPDAQGRTQSVTPERAGWGYVGFDTFELEEGQQLHLPAVAEERCLVLVAGRASVTTPTAQFSEIGERMSPFERIKPWAVYVTPGETVQVQALTKLELAVCAAPGKGTYPTRLIAPQDIDGEARGKGHNQRYVHNILPEDKPADSLLVVEVWTHEGCTSSYPSHKHDTDNPPYETLLEETYYHRLNPEQGFCMQRVYTDDRSLDECMAVYNRDVVMVPKGYHPVATMAGYDSYYLNVMAGPVRKWIFTWEDDHAWINRDYPAR
>NZ_CP022073.1|WP_058667986.1|2724837_2725728_+|myo-inosose-2-dehydratase
MAVQLGINPLTWTNDDLPSLGAETPLDTCLSEGKEAGFAGFELGNKFPREARLLGPILQRHDLKLVSGWYSGRLLERSVEEEIAAAQAHLTLLRELGAKVMVFAEVSHCIHGEQQTPVHLRPRFPQARWAEYGEKLTAFARYTQQQGVQIAYHHHMGTVIESAEDVDNLMIHTGDEVGLLLDTGHLTFAGADPLAVAQRWASRINHVHCKDVRADVLADVKNRKTSFLDAVLSGVFTVPGDGCVDYPPIMRLLKEHDYHGWLVVEAEQDPAIAHPLTYARLGYNNLSRLARDAGLI
>NZ_CP022073.1|WP_047461790.1|2722917_2724822_+|5-dehydro-2-deoxygluconokinase
MEKQFDVICMGRVAVDLYSQQIGARLEDVSSFAKYLGGSSGNVAYGAARQGLRSSMLARVGDEHMGRFLREELNHVGCDTSHLITDKERLTALVLLGIKDRDTFPLIFYRDNCADMAITASDVDEQYIASSRCLAITGTHLSHPQTRDAVLTALTCARRHGVRTVLDIDYRPVLWGLTSLGDGETRFIAAEQVTRQLQAVLHLFDVIVGTEEEFHIAGGATDTVQALAQVREVSAATLVCKRGALGCSVYTDAIPPSLDDGLTVTGVRVEVLNVLGAGDAFMSGLLRGYLNDEGWEQACRYANACGALVVSRHGCAPAMPSKVELDDYLSREHQVPRPDLDPRLNHLHRVTTRRRNWPELCVMAFDHRSQLEEMALQCGASLKRIPALKTLILQASRDAANSAGLEGKAGLLCDGTFGQDALNAITGEGWWIGRPIELPGSRPLEMEHGNIGTQLISWPQEHVVKCLVFFHPEDAHGLRLEQEQKIAEVYHACCQSGHELLLEVILPVGMPRSDELYLRAISRFYNLGIYPDWWKLPPLSSDGWTALSDIIERRDPHCRGVVILGLDAPAEQLRAGFRAAAGHELVKGFAVGRTLFGEASRAWLKHDIDDAQLVTRIRDNYLQLIAWWRERGQA
>NZ_CP022073.1|WP_058667987.1|2721771_2722905_+|Gfo/Idh/MocA-family-oxidoreductase
MKQVRIGLIGTGYIGKAHAIAYAQAPTVFNLQGQLVREMVAEVTPELAAERAQAFGFRRSTGDWRELVADPNIDVVDICSPNHLHKEMALAAIRHGKHVYSEKPLALNAHDAREMVEAAKQAGVKTLVGFNYMKNPTAALAKEIIARGEIGDVIHFYGTHNEDYMADPLSPIHWHCFKETAGLGALGDLAAHIVNMAHYLVGDIREVCGDLKIVVPERPASAGSAQKVVVENEDQAHAMVRFASGAQGVIETSRVACGRKMGLSYVITGTKGTISFTQERMAELKLYLHDDPVNRQGFRTLLVGPAHPDYAAFCMGAGHGIGFNDQKTVEIRDLVNGVAADAPMWPDFEEGWKVSRVLDAIALSHQEGRWLNVNDIV
>NZ_CP022073.1|WP_047461785.1|2720732_2721761_+|ABC-transporter-permease
MTQIVTKTQPPAKRNGRIDPIAFFERFGVLIFMFLLLIFFQTQNSNFLSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAVCAMTAAYVIKGDNFTTVDPSAWGGMSWLIGLGICLAMGTAIGFLHGLGVTRLRLPPFIVTLGGMTIWRGLTLVINDGAPIAGFDQGYRWWGRGELLGISIPIWIFALVAIGGYLALHKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVVIGCLAGLAGFVLSARLGSAEAVAGISFELRVIASVVIGGTSLMGGYGRIGGTVIGSIIMGILINGLVLMNVSAYYQQIITGLIIVLAVAFDTYAKSRRGAL
>NZ_CP022073.1|WP_047461783.1|2719173_2720721_+|sugar-ABC-transporter-ATP-binding-protein
MLQPLLNVTDLAKSFSGVWALSNVQLTVGTGEIHALLGENGAGKSTLLKALAGAQPQTRGDIWFNGETLPVEDSPVERQNKGIITIYQEFNLLPNMTVAENMFLGREPRKRNVIVDAKAVNQEAQVVLDYLQLNVAPTTPVARLSVAQQQMVEIARALTLNAKLIIMDEPSAALSDSEVESLHRVVRELKGRGVSIIYVTHRLHEVFQLCDRFTVFQDGRFTGSGAVAETNVEQLIRLMVGRDVAFNRRPPSETHHEDKPIRLAVKGLCREKPPLDPHGIALHDISFHVHAGEVLGIAGLVGAGRTEVARCLFGADGFTSGTFELDGAAYHPRDPMYALDQGVALVPEDRKKEGAVLGLSIRDNLSLSSLSSLLRWRFFVNTRKEDDLIESYRQALQIKMVNSEQEVRKLSGGNQQKVILARCMALNPRVLIVDEPTRGIDVGTKSEVHQVLFDMAKQGVAVIVISSDLPEVMAVSDRIITLSEGRVTGEIHGDDATEERLMMMMAINHNALNAA
>NZ_CP022073.1|WP_049011882.1|2732408_2733650_+|hypothetical-protein
MTELPRPDYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSIVDVRDPKNPRAAGYVPAPPGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRQVGETVSDVQDRGWSAGLRVFDISTPDKPREIGFLSLNGIGIHRIWYVGGRWAYVSALIDGFTDYIFLTIDLADPRKPEVAGRWWLPGMNQAAGETPDWPEGKRYALHHAIIAGDTAYGSWRDGGLTLLDVQDRTQPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKLIWLFDIREPSNPVSIATFPQPDEADYVAKGAHFGPHNLHENRPGSFISSTLIFATYQNAGVRAYDITNPYRPVETGALVPAAPEKMMDTRPNRPQVIQSCDVFVDARGIIYSTDYNGGLSVIEYLG
>NZ_CP022073.1|WP_058667983.1|2733740_2734940_-|S-methyl-5-thioribose-kinase
MSQYRTFTAQDAVEYARTFGGIDDPSTLVEAQEVGDGNLNLVFKIFDTTGVSRIVVKQALPYVRCVGESWPLTLDRARLEAQTLVAHYQHCPQHTVKIHHFDPELAVMVMEDLSDHNIWRGELIKGAWYPQAARQLGEYLAQTLFHTSDFYLHPHDKKAQVATFINPEMCEITEDLFFNDPYQIHERNSYPAEIEGDVAALRSDAQLKLAVAALKHRFFSHAEALLHGDIHSGSIFVADSRLKAIDAEFGYFGPIGFDVGTAIGNLLLNFCGLPGHLGIRDAAAAREQRLTDIQALWNTFAERFQVLATEKTRDAALRAPGYASEFLKKVWADAIGFCGTELIRRSVGLSHVADIDTIQDAEMRHECLRHAITLGKALIVIADRIESVEALIARVRQYS
>NZ_CP022073.1|WP_058667982.1|2735045_2736074_+|S-methyl-5-thioribose-1-phosphate-isomerase
MQTLQTTSLRVADNQLFILDQQALPQEKRWLDASTVEALVGHIHALRVRGAPLIGLSASLLLALLAESGYRRDELAIALETLRAARPTAVNLMNNLDRMKQALGQEDFVPALAAEALRLIDEDKQLCDDIARAGSALVKPGSRLLTHCNTGGLATAGTGTALGVIARAYAQGNVQNVWVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAKGLVDAVWVGADRIAANGDVANKIGTYSLAVLAKFHGIPFYVAAPQTTLDPHCPNGDAIPIEQRAAGEVTGVAGSFGAVQWAPENAQVYNPAFDVTPAALISGWVLDSGVVTPEDVAKGVFRTEAA
>NZ_CP022073.1|WP_012134737.1|2736118_2736661_-|acireductone-dioxygenase
MSALTIYSDKDASQPQWHSTDAAEIAQQLNAKGVRFERWVADRDLGQAPAPETVITAYQHAIDKLVAEKGYQSWDVISLRADNPQKEALRAKFLNEHTHGEDEVRFFVEGAGLFCLHIGDQVYQVLCEKNDLISVPAGTPHWFDMGSEPNFTAIRIFDNPEGWVAQFTGDAIADAYPRLL
>NZ_CP022073.1|WP_058667981.1|2736657_2737347_-|acireductone-synthase
MIRAIVTDIEGTTSDIRFVHNVLFPYARERLAAFVTARQYAEPVKSILDNLRNEIARPDASTAELIETLFTFMDEDRKSTALKALQGIIWHDGYVNGNFTGHLYPDVLPALEKWKAQGIDLYVYSSGSVAAQKLLFGYSDEGDITHLFSGYFDTHIGAKRETQSYRNIASYIGVAPSQILFLSDVYQELDAAEEAGLRTLQLIRGEGDGASRHHQVHQFDDINPEQILS
>NZ_CP022073.1|WP_047461809.1|2737343_2737958_-|methylthioribulose-1-phosphate-dehydratase
MTDNLQLTQLVETCRWIGAKGWAPATGGNMSVRQDDAFCWLSESGKDKGNLTTDDFLQVEIATSHAPSGRKPSAETGLHTLIYRLFPQANAVLHVHTVNATVLSRIVKTPELYISGFEMQKSLSGQTTHLDTVCVPVFDNDQDIDALASRIAHYAQERSLNYGFLLRGHGLTCWGRSVEEARRHLEGLEFLFECEMRLRQLERL
>NZ_CP022073.1|WP_058667980.1|2738560_2739175_-|YagU-family-protein
MNIFEQTPPNRRRYGLAAFIGLIAGIVSAFVKWGAEVPLPPRSPTDMFTAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWMGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLVDLPWYENVSEIFGHLIWFWSIEIIRRDLRNRITHQPDPEIPLGTSR
>NZ_CP022073.1|WP_047461812.1|2739520_2739760_-|hypothetical-protein
MMSMDNMIIAGVRIYFPPGTALPVPTPELRTFAIVSKDQTGHLVLEYKNRQWVPVLTRLFDDSAHAISAITSLSKKTWH
>NZ_CP022073.1|WP_047461815.1|2739756_2739996_-|DinI-family-protein
MFVELVYDKRNVEGLPGARNIILNELTKRVHRIFPDADVRVKPMQANALNSDSTKTEKERLNRMLEEMFEEADMWLVNE
>NZ_CP022073.1|WP_012134708.1|2740776_2741259_-|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAYLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR

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Crispr_ID: NZ_CP022073_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_9

2780829-2780918

Unclear

Consensus_repeat	Method
GCCTGATGGCGCTGCGCTTATCAGG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP022073_9

>merge|NZ_CP022073|9|2780829-2780918|CRISPRCasFinder
GCCTGATGGCGCTGCGCTTATCAGGCCTACGGCAATGATTCGTAGGCCGGGTACTCGGCGTAAACGCCTGATGGCGCTGCGCTTATCCGG

>NZ_CP022073|9|9|2780829-2780918|CRISPRCasFinder
GCCTGATGGCGCTGCGCTTATCAGG	CCTACGGCAATGATTCGTAGGCCGGGTACTCGGCGTAAAC
GCCTGATGGCGCTGCGCTTATCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058669113.1\|2773835_2774159_-\|YfiM-family-lipoprotein	unknown	unknown	gnl\|CDD\|182705
NZ_CP022073.1\|WP_123907454.1\|2786504_2786660_+\|rpoE-leader-peptide-RseD	unknown	unknown	unknown
NZ_CP022073.1\|WP_012134681.1\|2763151_2763883_+\|polyphenol-oxidase	unknown	unknown	gnl\|CDD\|182677
NZ_CP022073.1\|WP_047461899.1\|2762174_2763155_+\|23S-rRNA-pseudouridine(1911/1915/1917)-synthase-RluD	unknown	unknown	gnl\|CDD\|183020
NZ_CP022073.1\|WP_058667976.1\|2778373_2779072_-\|DTW-domain-containing-protein	unknown	unknown	gnl\|CDD\|225690
NZ_CP022073.1\|WP_060815886.1\|2779769_2780816_+\|tRNA/rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|236779
NZ_CP022073.1\|WP_012131206.1\|2782417_2783755_-\|ATP-dependent-RNA-helicase-SrmB	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236877
NZ_CP022073.1\|WP_012131208.1\|2784608_2786231_-\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|236374
NZ_CP022073.1\|WP_012131205.1\|2781988_2782372_+\|autonomous-glycyl-radical-cofactor-GrcA	unknown	unknown	gnl\|CDD\|182983
NZ_CP022073.1\|WP_047461924.1\|2783886_2784624_+\|tRNA(1)(Val)-(adenine(37)-N(6))-methyltransferase-TrmN	unknown	unknown	gnl\|CDD\|226608
NZ_CP022073.1\|WP_047461913.1\|2779141_2779561_-\|thioredoxin-TrxC	unknown	unknown	gnl\|CDD\|182889
NZ_CP022073.1\|WP_060937452.1\|2787913_2788870_+\|sigma-E-factor-regulatory-protein-RseB	unknown	unknown	gnl\|CDD\|236525
NZ_CP022073.1\|WP_058667974.1\|2787263_2787914_+\|anti-sigma-E-factor-RseA	unknown	unknown	gnl\|CDD\|182789
NZ_CP022073.1\|WP_058667977.1\|2774207_2775563_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|236510
NZ_CP022073.1\|WP_012131211.1\|2788866_2789346_+\|SoxR-reducing-system-protein-RseC	unknown	unknown	gnl\|CDD\|182788
NZ_CP022073.1\|WP_058667978.1\|2772540_2773839_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|182433
NZ_CP022073.1\|WP_024130844.1\|2764012_2766586_+\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|182791
NZ_CP022073.1\|WP_047461918.1\|2780980_2781670_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP022073.1\|WP_047461908.1\|2775677_2778338_-\|protein-lysine-acetyltransferase	unknown	unknown	gnl\|CDD\|223972
NZ_CP022073.1\|WP_006176728.1\|2786656_2787232_+\|RNA-polymerase-sigma-factor-RpoE	unknown	unknown	gnl\|CDD\|131985

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058669113.1\|2773835_2774159_-\|YfiM-family-lipoprotein	gnl\|CDD\|182705	PRK10759, PRK10759, YfiM family lipoprotein.	2.75558e-56
NZ_CP022073.1\|WP_058667974.1\|2787263_2787914_+\|anti-sigma-E-factor-RseA	gnl\|CDD\|182789	PRK10863, PRK10863, anti-sigma-E factor RseA.	6.37218e-142
NZ_CP022073.1\|WP_012134681.1\|2763151_2763883_+\|polyphenol-oxidase	gnl\|CDD\|182677	PRK10723, PRK10723, polyphenol oxidase.	0
NZ_CP022073.1\|WP_047461899.1\|2762174_2763155_+\|23S-rRNA-pseudouridine(1911/1915/1917)-synthase-RluD	gnl\|CDD\|183020	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD.	0
NZ_CP022073.1\|WP_058667976.1\|2778373_2779072_-\|DTW-domain-containing-protein	gnl\|CDD\|225690	COG3148, COG3148, Uncharacterized conserved protein [Function unknown].	7.23555e-126
NZ_CP022073.1\|WP_060815886.1\|2779769_2780816_+\|tRNA/rRNA-methyltransferase	gnl\|CDD\|236779	PRK10864, PRK10864, putative methyltransferase; Provisional.	0
NZ_CP022073.1\|WP_012131206.1\|2782417_2783755_-\|ATP-dependent-RNA-helicase-SrmB	gnl\|CDD\|236877	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional.	0
NZ_CP022073.1\|WP_012131208.1\|2784608_2786231_-\|L-aspartate-oxidase	gnl\|CDD\|236374	PRK09077, PRK09077, L-aspartate oxidase; Provisional.	0
NZ_CP022073.1\|WP_012131205.1\|2781988_2782372_+\|autonomous-glycyl-radical-cofactor-GrcA	gnl\|CDD\|182983	PRK11127, PRK11127, autonomous glycyl radical cofactor GrcA; Provisional.	2.38077e-91
NZ_CP022073.1\|WP_047461924.1\|2783886_2784624_+\|tRNA(1)(Val)-(adenine(37)-N(6))-methyltransferase-TrmN	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	4.34253e-99
NZ_CP022073.1\|WP_047461913.1\|2779141_2779561_-\|thioredoxin-TrxC	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	9.16829e-105
NZ_CP022073.1\|WP_060937452.1\|2787913_2788870_+\|sigma-E-factor-regulatory-protein-RseB	gnl\|CDD\|236525	PRK09455, rseB, anti-sigma E factor; Provisional.	0
NZ_CP022073.1\|WP_012131211.1\|2788866_2789346_+\|SoxR-reducing-system-protein-RseC	gnl\|CDD\|182788	PRK10862, PRK10862, SoxR-reducing system protein RseC.	4.26008e-99
NZ_CP022073.1\|WP_058667977.1\|2774207_2775563_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|236510	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase.	0
NZ_CP022073.1\|WP_058667978.1\|2772540_2773839_+\|MFS-transporter	gnl\|CDD\|182433	PRK10406, PRK10406, alpha-ketoglutarate transporter; Provisional.	0
NZ_CP022073.1\|WP_024130844.1\|2764012_2766586_+\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|182791	PRK10865, PRK10865, ATP-dependent chaperone ClpB.	0
NZ_CP022073.1\|WP_047461918.1\|2780980_2781670_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	8.42325e-151
NZ_CP022073.1\|WP_047461908.1\|2775677_2778338_-\|protein-lysine-acetyltransferase	gnl\|CDD\|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	0
NZ_CP022073.1\|WP_006176728.1\|2786656_2787232_+\|RNA-polymerase-sigma-factor-RpoE	gnl\|CDD\|131985	TIGR02939, Sigma_factor_ECF_subfamily, RNA polymerase sigma factor RpoE. A sigma factor is a DNA-binding protein protein that binds to the DNA-directed RNA polymerase core to produce the holoenzyme capable of initiating transcription at specific sites. Different sigma factors act in vegetative growth, heat shock, extracytoplasmic functions (ECF), etc. This model represents the clade of sigma factors called RpoE. This protein may be called sigma-24, sigma-E factor, sigma-H factor, fecI-like sigma factor or alternative sigma factor AlgU.	1.06423e-108

>NZ_CP022073.1|WP_060815886.1|2779769_2780816_+|tRNA/rRNA-methyltransferase
MNDELKNKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRTDGGRRPARDARDERSGQIRDRKREDSPWRTVSRAPGDDTPEKAEHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPDAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELAKASGTEHHGGVCFLIKKRNGTTVKQWVSQADAQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDSIVDVLDDFRQAGYTIVTTSSDQGKPLFSTALPAKMVLVLGRELESLPEAAREPGDLCVKIDGTGNVENLNVSVATGVLLGEWWRQNKA
>NZ_CP022073.1|WP_047461913.1|2779141_2779561_-|thioredoxin-TrxC
MNTVCTSCQAINRIPDDRIQDAAKCGRCGHDLFDGEVINATGETLDKLLKDDLPVVVDFWAPWCGPCRNFAPIFEDVAEERSGKVRFVKVNTEAERELSARFGIRSIPTIMIFKNGEVIDMLNGAVPKAPFDSWLNESL
>NZ_CP022073.1|WP_058667976.1|2778373_2779072_-|DTW-domain-containing-protein
MTDNAVLQLRAERLARATRPFLARGNRIRRCQRCLLPLKLCLCDTLSPSQATSRFCLVMFDTEPMKPSNTGRLIADILPDTTAFQWSRTEPPQALLDLVNNPDYQPMVVFPASYAGEEREVIFTPSAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYHLREIHAEGQYCTAEVAIALLDLAGDTAAATHLGDHFSRFKTRYLAGKTQHQGSVTTETAESV
>NZ_CP022073.1|WP_047461908.1|2775677_2778338_-|protein-lysine-acetyltransferase
MSQRGLEALLRPKSIAVLGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDVASLPFTPDLAVLCTNASRNIALLEALGEKGCKTCIILSAPAAQHAELLACAQRYKMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEHLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLNTSVGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDELWSRNGKLATLSEETRLKLSEALPAHVDIANPLDLRDDASCEHYVKTLNILLASQDFDALMVIHSPSAAAPGTESAHALIEAVKHHPRGKFVTLLTNWCGEFSSQEARKMFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPVLPGNLTSDTAQAHNLLQQAIAEGATSLDTHEVQPILQAYGLHTLPTWIAGDSAEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTATEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMNLARYLVIQGIKSKKIRGRSALRPLDITGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAGEFTALDVTLDIAPYDGDNESRLAIRPYPQQLEEWVEMKNGERCLFRPILPEDEPYLQQFISQVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLRRLNGITMPNNRGMVALARKLGFDVDIQLEEGIVGLTLNLAQYEES
>NZ_CP022073.1|WP_058667977.1|2774207_2775563_-|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MLSKFKRNKHQQHLAQLPKISQPVDDVDFFYAPANFRETLLEKIASATQRICIIALYLEQDDGGKGILDALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMAQENPGIDIPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQNDKYRYDRYQLIRNAKMADIMYEWVTQNLLNGRGVNRLDSAQRPKSPEIKNDIRLYRQELRDASYHFQGDADNEQLSVTPLVGLGKSSLLNKTIFHLMPCAEHKLTICTPYFNLPALLVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLLTGNNLNPRAWRLDLENAILIHDPKQELAPQREKELELIRTHTTVVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRIL
>NZ_CP022073.1|WP_058669113.1|2773835_2774159_-|YfiM-family-lipoprotein
MRFLILFSMLLLSGCSHMSNDSWSGQDKAQHFIASAMLSAAGNEYARHQGMSHDRSATVGLLFSISLGASKEMWDSRPGGSGWSWKDFAWDVAGATTGYAVWQMARN
>NZ_CP022073.1|WP_058667978.1|2772540_2773839_+|MFS-transporter
MTESSVTVNGSLASSDTRRRVWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCMGSLVIACLPGYATIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVILQQTLEESSLREWGWRIPFAFGAVLAVVALWLRRQLDETSKQETRALKEAGSLKGLWRNRKAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVYMLIQPLFGALSDKIGRRTSMLCFGALAALFTVPILSALQNVTSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSVGMETSFFWYVTIMAIVAFLVSLMLHRKGKGLRL
>NZ_CP022073.1|WP_024130844.1|2764012_2766586_+|ATP-dependent-chaperone-ClpB
MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGINAGQLRTSIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAVEQMRGGESVNDQGAEDQRQALQKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEIHISDDALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELIPGKAIRLEANDDRIVAVQ
>NZ_CP022073.1|WP_012134681.1|2763151_2763883_+|polyphenol-oxidase
MSKLIVPQWPIPEGVAACSSVRTGGVSLPPYDSLNLGAHCGDNPEHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCEGVLEETVACFADKPENIIAWLGPAIGPAAFEVGAEVREAFIAKDAKASSAFQARGEKYLADIYQLARQRLANVGVESVYGGDRCTYSESETFFSYRRDKITGRMASFIWLI
>NZ_CP022073.1|WP_047461899.1|2762174_2763155_+|23S-rRNA-pseudouridine(1911/1915/1917)-synthase-RluD
MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDRRVLVNGKLCDKPKEKVLGGEQVSINAEIDEEIRFEPQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGRPRPPKGASEAFISTLRQFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIDVMRADFEEHKDDVDWL
>NZ_CP022073.1|WP_047461918.1|2780980_2781670_-|uracil-DNA-glycosylase
MATDLTWHDVLADEKQQPYFVNTLHTVAGERQSGMTVYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIATPPSLLNMYKELETSIPGFTRPAHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLVNEHREGVVFLLWGSHAQKKGAIIDRQRHYVLRAPHPSPLSAHRGFFGCNHFVLANQWLEQHGEKPIDWMPVLPAESE
>NZ_CP022073.1|WP_012131205.1|2781988_2782372_+|autonomous-glycyl-radical-cofactor-GrcA
MITGIQITKAANDDLLNSFWLLDSEKGEARCIAAKAGFAEDEVVAVNKLGEIEYREIPMEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
>NZ_CP022073.1|WP_012131206.1|2782417_2783755_-|ATP-dependent-RNA-helicase-SrmB
MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGGAINDFAERLLEDPVEVSATPSTRERKKIHQWYYRADDIQHKTALLVHLLKQPEATRSIVFVRKRERVHELAGWLREAGINNCYLEGEMVQGKRNEAIKRLTDGRVNVLIATDVAARGIDIPDVSHVFNFDMPRSSDTYLHRIGRTGRAGRKGTAISLVEAHDHLLLGKVGRYIEETLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKQEKEKPRVKKRHRDTKNIGKRRKPAGTGTDAQKQSNEE
>NZ_CP022073.1|WP_047461924.1|2783886_2784624_+|tRNA(1)(Val)-(adenine(37)-N(6))-methyltransferase-TrmN
MSQSTSTLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRITVHTEDVRQWVPRQTARFDLIISNPPYYEQGVECATPQREQARYTTTLDHEALLTTAAECITEEGFFCVVLPEQTGNIFTQQALSMGWHLRLRTDVAETESRLPHRVLLAFSPRTGECFSDRLVIRGPDQLYSEGYTALTQAFYLFM
>NZ_CP022073.1|WP_012131208.1|2784608_2786231_-|L-aspartate-oxidase
MTTTPELSCDVLIIGSGAAGLSLALRLAEKHQVIVLSKGPVSEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTQVQPNGEESYHLTREGGHSHRRILHAADATGKEVETTLVSKAQNHPNIRVLERSNAVDLIISDKIGLPGTRRVVGAWIWNRNKESVETCHAKSVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAHLKRPDGTRFMPDVDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPEAFVRQHFPMIYEKLLGLGIDLTKEPVPVVPAAHYTCGGVMVDDFGRTDVDGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDIDRRMPYARSVSTLPAWDESRVENPDELVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYANFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHYTLDYPALLPESGPSVLSPLNAYMNK
>NZ_CP022073.1|WP_123907454.1|2786504_2786660_+|rpoE-leader-peptide-RseD
MICLQHDKQKQMRNGTLRKRDTLSCCLLIVQFMEWRFESAWKFGLGRLYLG
>NZ_CP022073.1|WP_006176728.1|2786656_2787232_+|RNA-polymerase-sigma-factor-RpoE
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIDAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
>NZ_CP022073.1|WP_058667974.1|2787263_2787914_+|anti-sigma-E-factor-RseA
MQKEKLSALMDGETLDSELLKELAHDPGMQKTWESYHLIRDSMRGDTADVLHFDISARVMAAIENEPVRQTAPLIPEAQPAPHQWQKMPFWQKMRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSDATANGGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
>NZ_CP022073.1|WP_060937452.1|2787913_2788870_+|sigma-E-factor-regulatory-protein-RseB
MKQLWFAMSLVAGSLFFSVNASANTASGALLQQMNLASQSLNYELSFVSINKQGVESLRYRHARLDNSPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYADFKRLSPWYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWLDTETKLPMRVDLLDRDGETLEQFRVISFAVNQDVGNSMQMLAKANLPPLLSVPVGEKAKFNWSPTWLPQGFSEVSSSRRPLPTMDNLPIESRLYSDGLFSFSVNVNRATQNSTDQMLRTGRRTVSTSVRENAEITIVGELPPQTAKRIADNIKFGAAQ
>NZ_CP022073.1|WP_012131211.1|2788866_2789346_+|SoxR-reducing-system-protein-RseC
MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPSAEPLAPGQKVELGIAEGSLLGSAMLVYLSPLVGLFIFAALFQVLFGSDIAALSGAVLGGVGGFLIARGYSRKLAEREAWQPVILNVALPPGLVRVETPSSETNP

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Crispr_ID: NZ_CP022073_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_10

3082944-3083033

Orphan

Consensus_repeat	Method
TCAGGCCTACGGTGTACTGTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_10

>merge|NZ_CP022073|10|3082944-3083033|CRISPRCasFinder
TCAGGCCTACGGTGTACTGTTTTCCAGGCCGGATAAGGTGCTTGCCCGCCATCCGCGCGGAGTTCAGCCAGGCCTACGGTGTACTGTTTT

>NZ_CP022073|10|10|3082944-3083033|CRISPRCasFinder
TCAGGCCTACGGTGTACTGTTTT	CCAGGCCGGATAAGGTGCTTGCCCGCCATCCGCGCGGAGTTCAG
CCAGGCCTACGGTGTACTGTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_012131454.1\|3080966_3082235_+\|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|182774
NZ_CP022073.1\|WP_047462321.1\|3091079_3091973_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP022073.1\|WP_049008706.1\|3090496_3091009_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP022073.1\|WP_012131451.1\|3078334_3079147_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP022073.1\|WP_058667769.1\|3082224_3082908_+\|cell-division-protein-DedD	unknown	unknown	gnl\|CDD\|236940
NZ_CP022073.1\|WP_058667777.1\|3073290_3073665_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367032
NZ_CP022073.1\|WP_012131456.1\|3083222_3083711_+\|colicin-V-production-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP022073.1\|WP_012131458.1\|3085361_3085931_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|235677
NZ_CP022073.1\|WP_012131461.1\|3087250_3088033_+\|histidine-ABC-transporter-substrate-binding-protein-HisJ	unknown	unknown	gnl\|CDD\|185334
NZ_CP022073.1\|WP_012131463.1\|3088901_3089618_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|185029
NZ_CP022073.1\|WP_058667773.1\|3077321_3078335_+\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|181205
NZ_CP022073.1\|WP_049008687.1\|3089625_3090399_+\|histidine-ABC-transporter-ATP-binding-protein-HisP	unknown	unknown	gnl\|CDD\|182592
NZ_CP022073.1\|WP_012131453.1\|3079982_3080897_+\|acetyl-CoA-carboxylase,-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP022073.1\|WP_058669110.1\|3075019_3076021_-\|flagella-biosynthesis-regulator-Flk	unknown	unknown	gnl\|CDD\|182670
NZ_CP022073.1\|WP_058667775.1\|3076123_3077260_+\|4-phosphoerythronate-dehydrogenase-PdxB	unknown	unknown	gnl\|CDD\|185335
NZ_CP022073.1\|WP_060815845.1\|3073844_3075023_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|183487
NZ_CP022073.1\|WP_012131452.1\|3079170_3079830_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|182775
NZ_CP022073.1\|WP_012131460.1\|3086219_3087002_+\|lysine/arginine/ornithine-ABC-transporter-substrate-binding-protein-ArgT	unknown	unknown	gnl\|CDD\|184972
NZ_CP022073.1\|WP_012131462.1\|3088218_3088905_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|185089
NZ_CP022073.1\|WP_012131457.1\|3083746_3085264_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_012131454.1\|3080966_3082235_+\|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	gnl\|CDD\|182774	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional.	0
NZ_CP022073.1\|WP_047462321.1\|3091079_3091973_-\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	7.24542e-174
NZ_CP022073.1\|WP_049008706.1\|3090496_3091009_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.51986e-29
NZ_CP022073.1\|WP_012131451.1\|3078334_3079147_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	2.16519e-147
NZ_CP022073.1\|WP_058667769.1\|3082224_3082908_+\|cell-division-protein-DedD	gnl\|CDD\|236940	PRK11633, PRK11633, cell division protein DedD; Provisional.	3.75491e-129
NZ_CP022073.1\|WP_058667777.1\|3073290_3073665_+\|hypothetical-protein	gnl\|CDD\|367032	pfam02316, HTH_Tnp_Mu_1, Mu DNA-binding domain. This family consists of MuA-transposase and repressor protein CI. These proteins contain homologous DNA-binding domains at their N-termini which compete for the same DNA site within the Mu bacteriophage genome.	0.00232115
NZ_CP022073.1\|WP_012131456.1\|3083222_3083711_+\|colicin-V-production-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	1.42468e-103
NZ_CP022073.1\|WP_012131458.1\|3085361_3085931_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|235677	PRK06029, PRK06029, UbiX family flavin prenyltransferase.	1.28597e-126
NZ_CP022073.1\|WP_012131461.1\|3087250_3088033_+\|histidine-ABC-transporter-substrate-binding-protein-HisJ	gnl\|CDD\|185334	PRK15437, PRK15437, histidine ABC transporter substrate-binding protein HisJ; Provisional.	0
NZ_CP022073.1\|WP_012131463.1\|3088901_3089618_+\|ABC-transporter-permease	gnl\|CDD\|185029	PRK15069, PRK15069, histidine ABC transporter permease HisM.	2.12539e-163
NZ_CP022073.1\|WP_058667773.1\|3077321_3078335_+\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|181205	PRK08040, PRK08040, putative semialdehyde dehydrogenase; Provisional.	0
NZ_CP022073.1\|WP_049008687.1\|3089625_3090399_+\|histidine-ABC-transporter-ATP-binding-protein-HisP	gnl\|CDD\|182592	PRK10619, PRK10619, histidine ABC transporter ATP-binding protein HisP.	0
NZ_CP022073.1\|WP_012131453.1\|3079982_3080897_+\|acetyl-CoA-carboxylase,-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	0
NZ_CP022073.1\|WP_058669110.1\|3075019_3076021_-\|flagella-biosynthesis-regulator-Flk	gnl\|CDD\|182670	PRK10715, flk, flagella biosynthesis regulator Flk.	4.94857e-175
NZ_CP022073.1\|WP_058667775.1\|3076123_3077260_+\|4-phosphoerythronate-dehydrogenase-PdxB	gnl\|CDD\|185335	PRK15438, PRK15438, erythronate-4-phosphate dehydrogenase PdxB; Provisional.	0
NZ_CP022073.1\|WP_060815845.1\|3073844_3075023_+\|MFS-transporter	gnl\|CDD\|183487	PRK12382, PRK12382, putative transporter; Provisional.	0
NZ_CP022073.1\|WP_012131452.1\|3079170_3079830_+\|DedA-family-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	3.92469e-155
NZ_CP022073.1\|WP_012131460.1\|3086219_3087002_+\|lysine/arginine/ornithine-ABC-transporter-substrate-binding-protein-ArgT	gnl\|CDD\|184972	PRK15010, PRK15010, lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT.	4.72551e-173
NZ_CP022073.1\|WP_012131462.1\|3088218_3088905_+\|ABC-transporter-permease-subunit	gnl\|CDD\|185089	PRK15135, PRK15135, histidine ABC transporter permease HisQ.	1.31259e-150
NZ_CP022073.1\|WP_012131457.1\|3083746_3085264_+\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0

>NZ_CP022073.1|WP_058667769.1|3082224_3082908_+|cell-division-protein-DedD
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKPGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPSRFAAENNASFDPVPAPVEPPKPKPVEKPKPQPKPQQQVAATPTPAPEPKPAAEEKPAPTGKAYVVQLGALKNADKVNEIVGKLRGAGFRVYTSPSTPVQGKITRILVGPDASRDKLKNSLGELQQISGLSGVVMGYSPN
>NZ_CP022073.1|WP_012131454.1|3080966_3082235_+|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase
MDNKRIPQAASPLAAWLSYLENLHSKTIDLGLERVSRVAARLGVLKPAPFVFTVAGTNGKGTTCRTLESVLTAAGYKVGVYSSPHLVRYTERVRVQGNELPESAHTASFAEIEAAREDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPDRESIGREKAGIFRAEKPAIVGEPEMPYTIADVAQETGAQLQRRGVDWHYDVTGDGWSFTDGEGTLANLPLPQVPQPNAATALAALRASGLNISEQAIRDGIARAILPGRFQIVSESPRVILDVAHNPHAAEYLTERLKMLPKNGRILAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGKGTVYDSVALAWHAALAEAKPEDTVLVCGSFHTVAHVMEVMDAGRSGGE
>NZ_CP022073.1|WP_012131453.1|3079982_3080897_+|acetyl-CoA-carboxylase,-carboxyltransferase-subunit-beta
MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMSARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLHDMPIVAAAFEFSFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASVLAKLMNLPAPNPDAPREGEVVPPVPDQEPEA
>NZ_CP022073.1|WP_012131452.1|3079170_3079830_+|DedA-family-protein
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHIMVMLMLIAAIVGDAVNYTIGRLFGERLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMIQDNLKLLIVGIIVVSILPGVVEIIRHKRAASRAAK
>NZ_CP022073.1|WP_012131451.1|3078334_3079147_+|tRNA-pseudouridine(38-40)-synthase-TruA
MSAVEQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPVNVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKAVPEDFHARFSATARRYRYIIYNHRLRPAILGHGVTHFYEPLDAERMHRAAQCLIGENDFTSFRAVQCQSRTPWRNVMHINVTRHGAYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRRLSAATAKAEGLYLVAVDYPERFDLPKTPLGPLFLAD
>NZ_CP022073.1|WP_058667773.1|3077321_3078335_+|aspartate-semialdehyde-dehydrogenase
MSEGWNIAILGATGAVGEALLETLAERQFPVGEIYALARNESAGEHLRYSGKSVIVQDVADFDWTQAQLAFFVAGAEASAAWVEEATNAGCLVIDSSGLFALEPDVPLVVPEVNPSVLADYRNRNVIAVANSLTSQLLASLKPLIDEGGLSRISVTSLLSASAHGKKAVDALAGQSAKLLNGIPIDEDDFFGRQLAFNMLPLLPDSEGSVREERRIVDEVRKILQDDGLMISASCIQSPVFYGHAQMVSFEALRPLAADEARDAFSRGEDIVLSEETDFPTQVGDASGNPQLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKTAEKLVQEYLY
>NZ_CP022073.1|WP_058667775.1|3076123_3077260_+|4-phosphoerythronate-dehydrogenase-PdxB
MKILVDENMPYARELFSRLGEVKAVPGRPIPVAELDDADALMVRSVTKVNEALLGGKSIKFVGTATAGTDHVDKAWLKQAGVGFSAAPGCNAIAVVEYVFSALLMLAERDGFALSDRTVGIVGVGNVGARLQARLEALGIRTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLYKEGPYKTLHLADEALIGRLKPGTILINACRGPVVDNTALLARLNAGQSLSVVLDVWEGEPDLNVALLEKIDIGTSHIAGYTLEGKARGTTQVFEAYSTFIGRAQKVALDTLLPAPEFGRITLHGPLDQPTLKRLAHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVMCDDASAATLLHKLGFNAVHHPAH
>NZ_CP022073.1|WP_058669110.1|3075019_3076021_-|flagella-biosynthesis-regulator-Flk
MQPISGTPARPPGEGQTAPSVAGEQPLSTQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGVKSDTPLLSRHFPAAEQNLTQRLSVAQQNHANRQVLSQLTELLSQGNNRQAVSDFIRQQYGQTALSQLTPEQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESGKLIWQSMLELSGVKSGELIPAKQFTHLVTWLQARQTLSNQSAPTLQTLQAALKLPLEPNEFTALRDYAQQTYQALPHTILTTAQVQDLLNQVFLRRVARERELTEPHHIQPIYSPFAPMIETIKSVTARPGLIFIALAVAFILFWLVS
>NZ_CP022073.1|WP_060815845.1|3073844_3075023_+|MFS-transporter
MTAVSQKEKTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACALAGGAWLLAALLPVSVPVKFALLIVGRLILGFGESQLLTGTLTWGMGLVGPSRSGKVMSWNGMAIYGALAAGAPLGLLIHSHYGFAALAGTTMTLPLLAWAFNGTVRKVPAHAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAVASLLVETAGLVLLWLAPVAWIALLGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDISYGITGPLAGLLATSCGYSSVFLAGAISAVVGIVVTLLSFRRG
>NZ_CP022073.1|WP_058667777.1|3073290_3073665_+|hypothetical-protein
MAKEWFTVKECLALPGFPGSVPAVRERLNKYSEGKESVKRKRAKSKAEEYHISVFPLYLRPYLNENEAVLTLENTFDQEVEPKEIWDMIFRLLTPGQRVQVTGLFRTKGIDAVFPFLFDDKSSF
>NZ_CP022073.1|WP_012131456.1|3083222_3083711_+|colicin-V-production-protein
MVWIDYAIIAVIGFSCLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAILFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGICFGALRGALIVAAILFFLDTFTGLSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLPRT
>NZ_CP022073.1|WP_012131457.1|3083746_3085264_+|amidophosphoribosyltransferase
MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRMQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRQIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIGDGRTEYMVASESVALDTLGFEFLRDVAPGEAVYITEKGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPTANELIAHGREVDEIRQIIGADGLIFQDLDDLIEAVRAENPDIQQFECSVFNGVYVTKDVDQQYLDYLDSLRNDDVKAMQRQNEVENLEMHNEG
>NZ_CP022073.1|WP_012131458.1|3085361_3085931_+|UbiX-family-flavin-prenyltransferase
MKRLIVGISGASGAIYGVRLLQVLRDVADVETHLVMSPAARQTLALETEFSLREVQALADVTHDARDIAASISSGSFQTAGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHCPQTLDDVINQTVNRVLDQFDITLPHDLFTRWQGA
>NZ_CP022073.1|WP_012131460.1|3086219_3087002_+|lysine/arginine/ornithine-ABC-transporter-substrate-binding-protein-ArgT
MKKTVLALSLLVGLSATAASYAALPQTVRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMCKRMQIKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAAKGSSVQPTIDSLKGKHVGVLQGSTQEAYANDNWRSKGVDVVAYANQDLIYSDLTAGRLDAALQDEVAASEGFLKQPAGKDYAFAGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALSDLRADGTYDKMAKKYFDFNVYGD
>NZ_CP022073.1|WP_012131461.1|3087250_3088033_+|histidine-ABC-transporter-substrate-binding-protein-HisJ
MKKLVLSLSLVLAFSSATAAFAAIPQKVRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKFYAADSRLVVAKDSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG
>NZ_CP022073.1|WP_012131462.1|3088218_3088905_+|ABC-transporter-permease-subunit
MLYGFSGVIFQGALVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNAVTDAMGIGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTGSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLFLERRYSVGVKRADL
>NZ_CP022073.1|WP_012131463.1|3088901_3089618_+|ABC-transporter-permease
MIEIIQEYWKSLLWSDGYRFTGVAITLWLLISSVVMGGILALFLAIGRVSSNKFIQFPIWLFTYVFRGTPLYVQLLVFYSGMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKRWLQHVKPSSTH
>NZ_CP022073.1|WP_049008687.1|3089625_3090399_+|histidine-ABC-transporter-ATP-binding-protein-HisP
MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVSGQNISLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLK
>NZ_CP022073.1|WP_049008706.1|3090496_3091009_-|GNAT-family-N-acetyltransferase
MAIITTSRLTLSLFQPTDWSFFLALRENPEIMRYMADITPEKDTRLLFARRLVSKHTFVIRLHNSDKPLGDIGLQISHHYPQEADIGYTVLPEAQGRGIATEALYAVCDYAFTHTSVKAINAYVLAENHASVRVLEKRGFTRTQVLENAYEVNGIRYDEWVYRLESEMGR
>NZ_CP022073.1|WP_047462321.1|3091079_3091973_-|TIGR01777-family-protein
MQILITGGTGLIGRHLIPRLLELGHQVTVVTRSPDKARQLLDSRVALWKGLEDRQNLNDIDAVVNLAGEPIADKRWTAQQKERLCQSRWSITQKLADLINASETPPAALISGSAAGYYGDLGEVVVTEEEPPHNEFTHKLCARWEQIACSAQSDKTRVCLLRTGVVLAPEGGILAKMIPPFRLGLGGPIGNGRQYLAWIHIDDMVNGILWLLDNDLRGPFNMVSPYPVRNEQFAHALGHALNRPAILRVPATVIRLLMGESSVLVLGGQRALPKRLEAAGFSFRWYDLEEALADVIR

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Crispr_ID: NZ_CP022073_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_11

3433069-3433149

Orphan

Consensus_repeat	Method
TGCAGGCCGGATAAGGCGTTTACGC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP022073_11

>merge|NZ_CP022073|11|3433069-3433149|CRISPRCasFinder
TGCAGGCCGGATAAGGCGTTTACGCTTCGCTTATCAGGCCTACACTCCTCACTGTTTGTAGGCCGGATAAGGCGTTTACGC

>NZ_CP022073|11|11|3433069-3433149|CRISPRCasFinder
TGCAGGCCGGATAAGGCGTTTACGC	TTCGCTTATCAGGCCTACACTCCTCACTGTT
TGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058669359.1\|3441425_3441980_-\|propanediol-utilization-microcompartment-protein-PduT	unknown	unknown	gnl\|CDD\|131578
NZ_CP022073.1\|WP_058669360.1\|3440618_3441071_-\|EutP/PduV-family-microcompartment-system-protein	unknown	unknown	gnl\|CDD\|371185
NZ_CP022073.1\|WP_058669370.1\|3424768_3425836_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|235471
NZ_CP022073.1\|WP_077956831.1\|3434828_3436001_+\|serine-type-D-Ala-D-Ala-carboxypeptidase-DacD	unknown	unknown	gnl\|CDD\|183117
NZ_CP022073.1\|WP_058669369.1\|3425832_3426912_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|234972
NZ_CP022073.1\|WP_058669368.1\|3426908_3428213_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853
NZ_CP022073.1\|WP_060816102.1\|3436860_3437919_+\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|224208
NZ_CP022073.1\|WP_099433339.1\|3431502_3431565_+\|membrane-protein-YoeI	unknown	unknown	gnl\|CDD\|380281
NZ_CP022073.1\|WP_012131747.1\|3431548_3432916_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP022073.1\|WP_047462685.1\|3441075_3441426_-\|propanediol-utilization-microcompartment-protein-PduU	unknown	unknown	gnl\|CDD\|227147
NZ_CP022073.1\|WP_012131737.1\|3424178_3424769_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|183877
NZ_CP022073.1\|WP_058669363.1\|3436249_3436717_+\|DNA-gyrase-inhibitor-SbmC	unknown	unknown	gnl\|CDD\|182195
NZ_CP022073.1\|WP_024130204.1\|3438091_3438427_+\|DUF496-family-protein	unknown	unknown	gnl\|CDD\|180070
NZ_CP022073.1\|WP_049009132.1\|3429490_3430315_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187576
NZ_CP022073.1\|WP_001364200.1\|3429264_3429315_-\|his-operon-leader-peptide	unknown	unknown	unknown
NZ_CP022073.1\|WP_058669361.1\|3439419_3440634_-\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|183500
NZ_CP022073.1\|WP_058669367.1\|3428218_3429118_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234781
NZ_CP022073.1\|WP_058669366.1\|3430356_3431286_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
NZ_CP022073.1\|WP_060816103.1\|3433179_3434604_-\|exodeoxyribonuclease-I	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236979
NZ_CP022073.1\|WP_047462679.1\|3438460_3439327_-\|L-threonine-kinase	unknown	unknown	gnl\|CDD\|226917

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058669359.1\|3441425_3441980_-\|propanediol-utilization-microcompartment-protein-PduT	gnl\|CDD\|131578	TIGR02526, putative_ethanolamine_utilization_protein, PduT-like ethanolamine utilization protein. This gene shows up in ethanolamine utilization operons in which a proteinaceous coat organelle is also encoded. It is closely related to the PduT protein in propane-diol operons with the same structure.	2.53215e-43
NZ_CP022073.1\|WP_058669370.1\|3424768_3425836_-\|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|235471	PRK05446, PRK05446, bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB.	0
NZ_CP022073.1\|WP_077956831.1\|3434828_3436001_+\|serine-type-D-Ala-D-Ala-carboxypeptidase-DacD	gnl\|CDD\|183117	PRK11397, dacD, serine-type D-Ala-D-Ala carboxypeptidase DacD.	0
NZ_CP022073.1\|WP_058669369.1\|3425832_3426912_-\|histidinol-phosphate-transaminase	gnl\|CDD\|234972	PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional.	0
NZ_CP022073.1\|WP_058669368.1\|3426908_3428213_-\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0
NZ_CP022073.1\|WP_060816102.1\|3436860_3437919_+\|FUSC-family-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	1.15182e-48
NZ_CP022073.1\|WP_099433339.1\|3431502_3431565_+\|membrane-protein-YoeI	gnl\|CDD\|380281	NF033439, small_mem_YoeI, membrane protein YoeI. YoeI, a hydrophobic protein of only 20 amino acids, is found in at least these genera: Escherichia, Salmonella, Citrobacter, Enterobacter, and Klebsiella. It is known to be expressed in E. coli.	0.0032681
NZ_CP022073.1\|WP_012131747.1\|3431548_3432916_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	1.30677e-46
NZ_CP022073.1\|WP_047462685.1\|3441075_3441426_-\|propanediol-utilization-microcompartment-protein-PduU	gnl\|CDD\|227147	COG4810, EutS, Ethanolamine utilization protein [Amino acid transport and metabolism].	2.32584e-66
NZ_CP022073.1\|WP_012131737.1\|3424178_3424769_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|183877	PRK13170, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	5.04915e-157
NZ_CP022073.1\|WP_058669363.1\|3436249_3436717_+\|DNA-gyrase-inhibitor-SbmC	gnl\|CDD\|182195	PRK10016, PRK10016, DNA gyrase inhibitor SbmC.	7.23682e-112
NZ_CP022073.1\|WP_024130204.1\|3438091_3438427_+\|DUF496-family-protein	gnl\|CDD\|180070	PRK05423, PRK05423, DUF496 family protein.	1.26448e-57
NZ_CP022073.1\|WP_049009132.1\|3429490_3430315_+\|SDR-family-oxidoreductase	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.22453e-77
NZ_CP022073.1\|WP_058669360.1\|3440618_3441071_-\|EutP/PduV-family-microcompartment-system-protein	gnl\|CDD\|371185	pfam10662, PduV-EutP, Ethanolamine utilisation - propanediol utilisation. Members of this family function in ethanolamine and propanediol degradation pathways. PduV may be involved in the association of the bacterial microcompartments (BMCs) to filaments.	4.92437e-87
NZ_CP022073.1\|WP_058669361.1\|3439419_3440634_-\|acetate/propionate-family-kinase	gnl\|CDD\|183500	PRK12397, PRK12397, acetate/propionate family kinase.	0
NZ_CP022073.1\|WP_058669367.1\|3428218_3429118_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	9.20222e-160
NZ_CP022073.1\|WP_058669366.1\|3430356_3431286_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.92347e-58
NZ_CP022073.1\|WP_060816103.1\|3433179_3434604_-\|exodeoxyribonuclease-I	gnl\|CDD\|236979	PRK11779, sbcB, exonuclease I; Provisional.	0
NZ_CP022073.1\|WP_047462679.1\|3438460_3439327_-\|L-threonine-kinase	gnl\|CDD\|226917	COG4542, PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism].	1.0322e-120

>NZ_CP022073.1|WP_012131747.1|3431548_3432916_+|APC-family-permease
MTMSHNVTPNTSRVELRKTLTLIPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVATAYAFALIAILFTALSYGKLVRRFPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFMPMINILLAKIYFEALVPTVPSWIFVVALVAFMTISNLRSIKTVANFNTLIVILQMGIVAVIVGLIIYGVSHGEGAGTLVSSRPFWSEGAHVVPMITGATILCFSFLGFDGISSLSEETKDAERVIPRAIFLTALIGGLIFIAASYFLQLYFPDISRFKDPDASQPEIMLYVAGKTFQWGVLIFSSVTVLASGMAAHAGVSRLMYVMGRDGVFPTRFFGYVHPKWRTPAWNVLLVGAIALLAINFDLVTATALINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFNYLVLPVCGALTVGALWINLEESSMTLGLIWAGIGLVYLACVTKSFRNPVPQYEDIAQ
>NZ_CP022073.1|WP_099433339.1|3431502_3431565_+|membrane-protein-YoeI
MGQFFAYATAFAVKGNDHVA
>NZ_CP022073.1|WP_058669366.1|3430356_3431286_+|LysR-family-transcriptional-regulator
MKPLLDVLMILDALEKEGSFAAASAKLFKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGQMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLTPLIESFYQHHSVTRLKFINGVLGGSWEALTQGRADIIVGAMHDPPYASGFGFARLGELEQVFAIAPHHPLVQEEEPLSRRTIKRFRAIVVGDETHPACSASAQLLDDQEAITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKNVAAQIASEPVWMGWNEQTTGLASAWWRDKILANSAIAGVYTMGDAGKSNS
>NZ_CP022073.1|WP_049009132.1|3429490_3430315_+|SDR-family-oxidoreductase
MKKVAIVGLGWLGMPLAMSLTARGWQVTGTKTTQDGVEAARMSGIESYPLRLEPELVCETDDLDALMDVDALVITLPARRSGPGEDFYRQAIQEVVDSALAYHVPRIIFTSSTSVYGDVHGIVKETTPRNPVTASGRILKELEDWLHNLPGTSVDILRLSGLVGPGRHPGRFFAGKTAPDGQQGVNLVHLEDVIAAITLLLQAPKGGHIYNICAPSHPARNVFYPQMARLLGMEPPHFLESQSNDKGKIIDGSRICNELGFEYQYPDPLVMPME
>NZ_CP022073.1|WP_001364200.1|3429264_3429315_-|his-operon-leader-peptide
MTRVQFKHHHHHHHPD
>NZ_CP022073.1|WP_058669367.1|3428218_3429118_-|ATP-phosphoribosyltransferase
MLDNTRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLSRRAQGEDPRYYTLRRLDFGGCRLSLATAVDEAWDGPASLDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAEAKQQLIDKLLTRIQGVIQARESKYIMMHAPSERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME
>NZ_CP022073.1|WP_058669368.1|3426908_3428213_-|histidinol-dehydrogenase
MSFNTIIDWNSCNTEQQRALLMRPAISASDSITRTVAEILDNVKSRGDDALREYSAKFDKTNVAALKVSAEEIAAASARLSDDLKQAMAVAVKNIETFHNAQKLPAVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLCSPPPIADEILYAAQLCGVQEIFNVGGAQAIAALAFGSESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGAMPDFVASDLLSQAEHGPDSQVILLTPDAGIAQNVAEAVERQLAELPRAETARQALSASRLIVTKDLAQCVAISNQYGPEHLIIQTRKARDLVEDITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSQAGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA
>NZ_CP022073.1|WP_058669369.1|3425832_3426912_-|histidinol-phosphate-transaminase
MSTENTRSVTDLARENVRNLTPYQSARRLGGNGDVWLNANEFPTAVEFQLTQQTLNRYPECQPKAVIENYAQYAGVNPGQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLENWQLDLRGIADKLDGVKVVFVCSPNNPTGQLINPQDLRTLLEMTRGNAIVVADEAYIEFCPQATLAGWLSEYPHLVVLRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALTPQGVNAMRERVAQILLERQYLVNALKEIACVEQVFDSETNYILARFTASSSVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV
>NZ_CP022073.1|WP_058669370.1|3424768_3425836_-|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB
MSQKYLFIDRDGTLIAEPPSDFQVDRFDKLAFEPDVVPVLLKLQKAGFKLVMITNQDGLGTQSFPQADFDGPHDLMMQVFTSQGVLFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDSANCYVIGDRATDIQLAENMGINGLRYNRETLNWTMIGEQLTKRDRYAHVERNTKETQIDVKVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEIAVKGDLYIDDHHTVEDTGLALGEALKLALGDKRGINRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMVEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
>NZ_CP022073.1|WP_012131737.1|3424178_3424769_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MNVVILDTGCANLNSVKSAVARHGYDPLVSRDPEVVLKADKLFLPGVGTAQAAMDQLHERELVELIKACTQPVLGICLGMQILGRHSEETNGVDLLGIIDQDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAWFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFFGVQFHPERSGAAGAQLLKNFLEM
>NZ_CP022073.1|WP_060816103.1|3433179_3434604_-|exodeoxyribonuclease-I
MNDGKQHPTFLFHDYETFGTHPALDRPAQFAAIRTDSDFNIIGEPEVFYCKPADDYLPQPGAVLITGITPQEARDKGENEAAFARRIHSLFTVPKTCVIGYNNVRFDDEVTRNILYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHANAHDAMADVYATIAMAQLVKSRQPRLFDYLYTHRNKHKLAALIDVPQMKPLVHISGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDMSPLLELDSDTLRERLYTAKADLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRDNPQVRDKVVAIFAEAEPFTPSENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDETEQQRWLEHRRQVFTPEFLQRYAEELQMLYQQYADDKEKLALLKSLWQYAEEIV
>NZ_CP022073.1|WP_077956831.1|3434828_3436001_+|serine-type-D-Ala-D-Ala-carboxypeptidase-DacD
MVLKRRLFIAASLLAMNLSSALAANVPDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQRRNPASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKQGERVSVRDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNHYVETLKLQDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNIDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGAESAKGREDQARKLLQWGQQNFDTVQILRSGKQVGTERIWYGDKENIALGTEQDFWMALPKTEIPHIKARYVLDKKELEAPIAAHQRVGEIELYDRDKLVAHWPLVTLESVGKGGVFSRLSDYFHHKA
>NZ_CP022073.1|WP_058669363.1|3436249_3436717_+|DNA-gyrase-inhibitor-SbmC
MDYEIRQAEKRNIAGFHMVGPWEKTVKQGFEQLMMWVDGNQVVPLEWIAVYYDNPDEVPAEKLRCDTVVSVPDNFTIPKNSEGVILTEIAGGQYATAVARVENHDFATPWYQFFNSLLQDNHYQIAAKPCFEVYLNNGTADGYWDIEMYVPVQSK
>NZ_CP022073.1|WP_060816102.1|3436860_3437919_+|FUSC-family-protein
MRADKSLSPFEIRLYRHYRVIHGIRIALAFILTFLLVRLFNIPEGTWPLITLVVIMGPISFWGNVVPRAFERIGGTILGSVLGLVALRLELFSLPLMLIWCAAAMFLCGWLALGKKPYQALLIGITLAVVVGAPAGDMNTALWRGGDVILGSLLAMLFTGIWPQRAFLHWRIQMAHCVTAYNRVYQAALSPNLLERPRLEKHLQKLLSDVVKMRGLITPASKETRIQKSIFEAIQTVNRNLVCMLELQINAHWASRASHFVMLNAHTLRETQQMTQQTLLTIAHALFEGNPQPVLANTEKLNEIVAELRQLINEHHGNTVAETPIHGYVWLSMETARQLELLSHLICRALRK
>NZ_CP022073.1|WP_024130204.1|3438091_3438427_+|DUF496-family-protein
METNKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGEMKNGDAKAE
>NZ_CP022073.1|WP_047462679.1|3438460_3439327_-|L-threonine-kinase
MAVAQCPASCGELIQGWILGSEKLVSCPVEWYSTVEVSSGAPLADERPLSRAMVNRLLEYWRYPAQWSQEIRIAVHSTIPVAKGMASSTADIAATAVATAHHLGHTLDEPTLAHLCVSLEPTDSTIFRQLTLFDHNDASTQMACEAQPQLDLLVLESPITLRTADYHRIPRLERLHAGAAMLQQAWERVQEACITQNPRRMGEAATLSAIASQQLLPKPGFDALLALVEACDLYGLNVAHSGSVVGLMLDRQRHDVDHIKWELAQRKLTEHWPDQHLLKMVTGGVELQ
>NZ_CP022073.1|WP_058669361.1|3439419_3440634_-|acetate/propionate-family-kinase
MSHKIMAINAGSSSLKFQLLAMPQGEMICQGLIERIGMANARVTMKTSAQKWQETAPIADHREAVTLLLDKLLSHHIINTLQDIDGVGHRVAHGGEFFKDSARVTDETLAQIERLAELAPLHNPVNALGIHIFRQLLPSTPSVAVFDTAFHQTLDESAYIYPLPWRYYAELGIRRYGFHGTSHKYVSTALAERLGVPLSALRVICCHLGNGSSICAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAEREGKTPQQLNYLLNNESGLLGISGVSHDYRDVEQAADGGNRRAALALTLFAERIRATIGSYIMQMGGLDALIFTGGIGENSARARAAVCHNLHFLGLSIDEEKNLRNATFIQAENAVVKVAVINTNEELMIAQDVMRIALSDKVTFGVSA
>NZ_CP022073.1|WP_058669360.1|3440618_3441071_-|EutP/PduV-family-microcompartment-system-protein
MKRIMLIGPSQCGKTSLTQSLNGEALHYQKTQAIVWSPGTIDTPGEYLENRCLYSALLASACEADIIALVLNADAPWSPFSPGFTGPMNRPVIGIVTKSDLADSSRISCVENWLIQAGAQKIFVTSALMESGIDEMFVFLSAKEPLCLTK
>NZ_CP022073.1|WP_047462685.1|3441075_3441426_-|propanediol-utilization-microcompartment-protein-PduU
MEKQPTTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALNQVTRTLGEMMRFTACPITRT
>NZ_CP022073.1|WP_058669359.1|3441425_3441980_-|propanediol-utilization-microcompartment-protein-PduT
MSQAIGILELTSIAKGMEAGDAMLKSASVNLLVSKTICPGKFLLMLGGDVGAVQQAIETGISLAADMLVDSLVLPNIHASVLPAVSGLNSVDQRQAVGIVETWSVAACISAADRAVKASNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRAVIPRPHEAMWRQIVEG

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Crispr_ID: NZ_CP022073_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_12

3762767-3762865

Orphan

Consensus_repeat	Method
CGCACATGAAAGCGCACATACATCCGCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_12

>merge|NZ_CP022073|12|3762767-3762865|CRISPRCasFinder
CGCACATGAAAGCGCACATACATCCGCACATGGCGAGGCCAGTCACGGCGCGGGTTTGTCGGGAGGTTGCGCACATGAAGGCGCACATACATCCGCACA

>NZ_CP022073|12|12|3762767-3762865|CRISPRCasFinder
CGCACATGAAAGCGCACATACATCCGCACA	TGGCGAGGCCAGTCACGGCGCGGGTTTGTCGGGAGGTTG
CGCACATGAAGGCGCACATACATCCGCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_060816015.1\|3765548_3765770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816014.1\|3764344_3764956_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816010.1\|3758749_3759061_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_024130423.1\|3761436_3761670_+\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|374243
NZ_CP022073.1\|WP_077956857.1\|3764952_3765549_+\|ead/Ea22-like-family-protein	unknown	unknown	gnl\|CDD\|379401
NZ_CP022073.1\|WP_060816009.1\|3758078_3758264_-\|YebW-family-protein	unknown	unknown	gnl\|CDD\|369331
NZ_CP022073.1\|WP_060816092.1\|3761720_3762215_+\|regulator	unknown	unknown	gnl\|CDD\|368819
NZ_CP022073.1\|WP_060816019.1\|3767742_3767970_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816021.1\|3768209_3768548_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816090.1\|3758384_3758657_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816091.1\|3759435_3759645_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP022073.1\|WP_060816013.1\|3764036_3764348_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_000555155.1\|3760318_3760726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_015980176.1\|3759680_3760331_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816008.1\|3757910_3758069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816011.1\|3760945_3761365_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|182039
NZ_CP022073.1\|WP_106068061.1\|3767176_3767743_+\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP022073.1\|WP_060816017.1\|3766281_3767148_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_060816012.1\|3763324_3764020_+\|phage-replication-protein	unknown	unknown	gnl\|CDD\|369163
NZ_CP022073.1\|WP_060816016.1\|3765772_3766285_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_060816011.1\|3760945_3761365_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|182039	PRK09706, PRK09706, transcriptional repressor DicA; Reviewed.	1.17774e-05
NZ_CP022073.1\|WP_024130423.1\|3761436_3761670_+\|Rha-family-transcriptional-regulator	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	1.95438e-16
NZ_CP022073.1\|WP_077956857.1\|3764952_3765549_+\|ead/Ea22-like-family-protein	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	1.10088e-06
NZ_CP022073.1\|WP_060816009.1\|3758078_3758264_-\|YebW-family-protein	gnl\|CDD\|369331	pfam07358, DUF1482, Protein of unknown function (DUF1482). This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.	3.59257e-24
NZ_CP022073.1\|WP_060816092.1\|3761720_3762215_+\|regulator	gnl\|CDD\|368819	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	3.14312e-50
NZ_CP022073.1\|WP_106068061.1\|3767176_3767743_+\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	1.17716e-11
NZ_CP022073.1\|WP_060816012.1\|3763324_3764020_+\|phage-replication-protein	gnl\|CDD\|369163	pfam06992, Phage_lambda_P, Replication protein P. This family consists of several Bacteriophage lambda replication protein P like proteins. The bacteriophage lambda P protein promoters replication of the phage chromosome by recruiting a key component of the cellular replication machinery to the viral origin. Specifically, P protein delivers one or more molecules of Escherichia coli DnaB helicase to a nucleoprotein structure formed by the lambda O initiator at the lambda replication origin.	9.69073e-71
NZ_CP022073.1\|WP_060816091.1\|3759435_3759645_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	4.32173e-28

>NZ_CP022073.1|WP_060816092.1|3761720_3762215_+|regulator
MINRNQPDPADKHDQIRAAVRAWSASLDNQDVVAGIIVEEWERQGGAGLDFPDDLSRKRQKLFRWLDSDTGYARENIRQLTPAILAVLPLEFRGRLIGQDCFMTRFAAMEKEISEAKQAVMLNAPKHQLVKEVREGIEHLLNMLPGDAVVQVLSGIAAIAPGVM
>NZ_CP022073.1|WP_024130423.1|3761436_3761670_+|Rha-family-transcriptional-regulator
MTALDKAIKAAGSARKLSMALGVTSMSISHWKHRDRGIVPPDYILKIHSITGVTPHELRPDLYPNPTDGLPAQEARA
>NZ_CP022073.1|WP_060816011.1|3760945_3761365_-|helix-turn-helix-domain-containing-protein
MCKLTIYNERMRKEEPNKALIARLNEVYARGITKADMARIAGVSPQAVNSWFKKGVISKKSALAIADAVGVSVAWLLGEDVGEKDGMKPDEQRLLELYRQLPEEEQQNMLRIVSLRLKELDELYAKYMGRRIKGDGESQ
>NZ_CP022073.1|WP_000555155.1|3760318_3760726_-|hypothetical-protein
MHSASFDVVYHFNSHRITKLISFTHTLVDSLFLMSMQKNTKETKRILMSDNTIKIIPQHMTATSVLITPDRAETIITFYRHEFEHHMQSDEQGKNSFQVKVELTPNMSVSMSPDQAVALVKSLQVALRDNGLWKD
>NZ_CP022073.1|WP_015980176.1|3759680_3760331_-|hypothetical-protein
MERLKPVSSVQPTSGTTSSVLPSIIVSATLAATTVSPYGDPSQYQSIGIDAKVSNRVSYAMDETGLRPSKEDVAMKSDTLEVSVSGMSREELDAKLSQNKSEVESIAAEMRRESADFKTYYTQQFSSIERGIAEIKGEIGGLKTGLTTTQWAMAVGLTLVTVILSGVMLASSWIISGNDKSPSVTSPAPIIIQVPTQQPLTSAPTNQSSSQQAPKQ
>NZ_CP022073.1|WP_060816091.1|3759435_3759645_+|fumarate-hydratase-FumD
MDYEEAAQLRYQEMCRIVGDVVFAMVAEGHETKKVSIADVIRTEISKGLDKWDADQIQVMELAVKLLEE
>NZ_CP022073.1|WP_060816010.1|3758749_3759061_+|hypothetical-protein
MASRPICVFWFKNQEQYDSYKKVLTDAWVLPEYYRDWLIRFNQMVERYENSGIQVIKVEAEADEFASWCLSNVRDTSTKSCNDFAAFIGGSKAIRDSERDWGY
>NZ_CP022073.1|WP_060816090.1|3758384_3758657_-|hypothetical-protein
MKIDLDLKAQGVDVSTSGYRDFVNAEIRGVEVDDVLEEIESDVLFAAIDLPDYIDWADNNSKLPEILDRLSPDEVISWLRDNGHLEDNND
>NZ_CP022073.1|WP_060816009.1|3758078_3758264_-|YebW-family-protein
METLFALVLTVAMTNGDFQDVILGVYDNQQECQAAVVEQKVNGECWPVEGIIRNGELPASI
>NZ_CP022073.1|WP_060816008.1|3757910_3758069_-|hypothetical-protein
MQKECGYCRKPVEEGKEVKNVLLYLNGPQLAQKEKEYCSKQCAEYDQMAHES
>NZ_CP022073.1|WP_060816012.1|3763324_3764020_+|phage-replication-protein
MTPDLYRAIQNRDSEMLSRMAGDSYDGRKVVNSDAEKLVDMLFENLMQVFPASTQTNLRTGDDIRVAKQQWIAAFAESGITSREQLSAGMQKARSSQSPFWPSPGQFISWCREGSGALGVSVDDIMSEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGTEGQLSEKELIRAAGDILHDWEKRTLAGKPIPPVRRAIAAPSQDRGPTPAEMLMAKYKQRKDAGLI
>NZ_CP022073.1|WP_060816013.1|3764036_3764348_+|hypothetical-protein
MASKSLWAIVDFLRENQTITPRQVQKLLGCDCKKSHNLLLHLTRKAVVIRTGEPHHPVYSLLPGGELNIKRFKSTVRKNMVTSVCRTSPAMKRVLAFYGRASA
>NZ_CP022073.1|WP_060816014.1|3764344_3764956_+|hypothetical-protein
MKSTVETKISELMKLGHELAKELHCAESAALVSDLASQLEVQLVRSNALAAENAGLKQIVDSVTDFSNEPQYHAEGMGCGLEDRGITGRYDACRYGWDEAMERIYGEVIPCAEEIAFPETSAFLAEVRSKSREEGAYFVANRMLAAWDAGFIDDTAKNAADIARMILTSTGFMADAPEGDFDRSFADGVLEDIAAQLRKGAAQ
>NZ_CP022073.1|WP_077956857.1|3764952_3765549_+|ead/Ea22-like-family-protein
MSNIDKKALRQLAEKAISAEGVTWWSEHQLSHEDGLALHDADAKFIAAASPATILALLDEMEVLQSFRTAYMEWSDKTDWVQTDKRLDVIKPWGKHRADVLKLYIDHLESNLEAAEHTAAVDHEAACSLVEENEELKRKLEAAEQCIAELEARTVTIKQFDEFQICHYGATEDYAKGYIDCQNNYNKALNAAGIGKGE
>NZ_CP022073.1|WP_060816015.1|3765548_3765770_+|hypothetical-protein
MSEVNMQIYISNLESESRECAHFQNIMMYKVRKLIKAVRGAGASAEIIELISDIEEFAISPPEVIAKHPAQEA
>NZ_CP022073.1|WP_060816016.1|3765772_3766285_+|hypothetical-protein
MALTHDELCQIACRFLQNNGFKVAFHDRFRAWTPYGEQADAIGFRNGASCLIEAKCSRSDLLADRKKPFRIEPEKGMGDWRFMISEPGIVNVEDLPTGWGLLHVVKDRVKKVHGWPGNGLWVNKDSKPFQANKQAECDYMFSALRRMDLRGHLKEVYDGVIVNKTEGSAA
>NZ_CP022073.1|WP_060816017.1|3766281_3767148_+|hypothetical-protein
MTTITRERLLKIQQWRETYGPGSNVVLPAEEAEELARIALASLDAGSNSHPAHGPLSNDRLHRIREILGKAAAQSDGGNIGYAMSDAVKAIDELLDVRKAEPVGYYRKGSDGFYFASPTEQRPGTIPLYTAPPEPVVPEAKCDDDGNTTSEFDHGWNSCRAAMLNHSGDVTEMGEAIKQQSSIHTSNGAMSGDAVKQPSNNASSLVFVDEIAEQNGVDPAITDAYMQGYHDSEGWKPAPVDNDDLHEAVSDLLAALDEYPEQLVPINRKSFLVRIIRAAMLNKDKNNG
>NZ_CP022073.1|WP_106068061.1|3767176_3767743_+|DUF551-domain-containing-protein
MSREFVDWFFDNKKNGCGNVWFMMMAAMWEGWKGNADMQSLPGIQSAPELNSLQNNAGSVPATLTANELSAILSWMTPPYITSGTHTDEFNELRNKVFYALRDAQNDEPVSDAYKLPGRWIPVSERMPERDAEIQVYCADTKEQMVGYMERNETEGWFRFASLPNGGGVYCKPTHWMPLPAAPQQEVK
>NZ_CP022073.1|WP_060816019.1|3767742_3767970_+|hypothetical-protein
MGRSRFDARLDKRVNIERLEEQGIIADSMEVRKSLVERVMRGEITPEQSREELKRIQRNAKRNGLKTRNQAWREG
>NZ_CP022073.1|WP_060816021.1|3768209_3768548_-|hypothetical-protein
MTELDLRKLSKKALLQLISEAANELHRRESSSSFVEPAAAEETALSPGQADLVFINNCLNASDYVHADAKDRYKQLASKYSAWFAYKGYPRDLRGSDLKKWKQYFRPNTREQ

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Crispr_ID: NZ_CP022073_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_13

3982921-3983010

Orphan

Consensus_repeat	Method
GATAAGGCGCTTGCGCCGCCATCAGGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_13

>merge|NZ_CP022073|13|3982921-3983010|CRISPRCasFinder
GATAAGGCGCTTGCGCCGCCATCAGGCAACCCCTACAACGCTATGCAGAACCTGTAGGCCTGATAAGGCGCTTGTGCCGCCATCAGGCAA

>NZ_CP022073|13|13|3982921-3983010|CRISPRCasFinder
GATAAGGCGCTTGCGCCGCCATCAGGCAA	CCCCTACAACGCTATGCAGAACCTGTAGGCCT
GATAAGGCGCTTGTGCCGCCATCAGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058669235.1\|3982282_3982900_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP022073.1\|WP_012132207.1\|3995290_3995464_+\|YciY-family-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_058669234.1\|3991245_3992259_+\|murein-tripeptide/oligopeptide-ABC-transporter-ATP-binding-protein-OppD	unknown	unknown	gnl\|CDD\|181888
NZ_CP022073.1\|WP_012132179.1\|3972768_3973419_-\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_CP022073.1\|WP_047463442.1\|3990325_3991234_+\|oligopeptide-ABC-transporter-permease-OppC	unknown	unknown	gnl\|CDD\|185304
NZ_CP022073.1\|WP_047463440.1\|3983063_3985739_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP022073.1\|WP_012132205.1\|3993323_3993653_-\|YciU-family-protein	unknown	unknown	gnl\|CDD\|179934
NZ_CP022073.1\|WP_012132206.1\|3993687_3995148_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP022073.1\|WP_049011367.1\|3976617_3977460_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_CP022073.1\|WP_012132187.1\|3975198_3975876_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
NZ_CP022073.1\|WP_012132194.1\|3980290_3981199_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
NZ_CP022073.1\|WP_012132193.1\|3979075_3980089_+\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
NZ_CP022073.1\|WP_012132192.1\|3978079_3978985_+\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
NZ_CP022073.1\|WP_012132201.1\|3989390_3990311_+\|oligopeptide-ABC-transporter-permease-OppB	unknown	unknown	gnl\|CDD\|181886
NZ_CP022073.1\|WP_047464045.1\|3977512_3977968_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966
NZ_CP022073.1\|WP_047464047.1\|3986216_3986864_+\|YchE-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236850
NZ_CP022073.1\|WP_058669233.1\|3992255_3993260_+\|murein-tripeptide/oligopeptide-ABC-transporter-ATP-binding-protein-OppF	unknown	unknown	gnl\|CDD\|185037
NZ_CP022073.1\|WP_012132186.1\|3974488_3975199_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
NZ_CP022073.1\|WP_012132200.1\|3987635_3989267_+\|oligopeptide-ABC-transporter-substrate-binding-protein-OppA	unknown	unknown	gnl\|CDD\|185059
NZ_CP022073.1\|WP_012132196.1\|3981327_3981741_-\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058669235.1\|3982282_3982900_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.32959e-117
NZ_CP022073.1\|WP_058669234.1\|3991245_3992259_+\|murein-tripeptide/oligopeptide-ABC-transporter-ATP-binding-protein-OppD	gnl\|CDD\|181888	PRK09473, oppD, oligopeptide transporter ATP-binding component; Provisional.	0
NZ_CP022073.1\|WP_012132179.1\|3972768_3973419_-\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	2.13371e-142
NZ_CP022073.1\|WP_047463442.1\|3990325_3991234_+\|oligopeptide-ABC-transporter-permease-OppC	gnl\|CDD\|185304	PRK15406, PRK15406, oligopeptide ABC transporter permease OppC; Provisional.	0
NZ_CP022073.1\|WP_047463440.1\|3983063_3985739_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP022073.1\|WP_012132205.1\|3993323_3993653_-\|YciU-family-protein	gnl\|CDD\|179934	PRK05094, PRK05094, dsDNA-mimic protein; Reviewed.	9.33651e-60
NZ_CP022073.1\|WP_012132206.1\|3993687_3995148_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	0
NZ_CP022073.1\|WP_049011367.1\|3976617_3977460_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	1.36742e-176
NZ_CP022073.1\|WP_012132187.1\|3975198_3975876_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	1.45036e-132
NZ_CP022073.1\|WP_012132194.1\|3980290_3981199_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
NZ_CP022073.1\|WP_012132193.1\|3979075_3980089_+\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
NZ_CP022073.1\|WP_012132192.1\|3978079_3978985_+\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
NZ_CP022073.1\|WP_012132201.1\|3989390_3990311_+\|oligopeptide-ABC-transporter-permease-OppB	gnl\|CDD\|181886	PRK09471, oppB, oligopeptide ABC transporter permease OppB.	0
NZ_CP022073.1\|WP_047464045.1\|3977512_3977968_-\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	2.44271e-105
NZ_CP022073.1\|WP_047464047.1\|3986216_3986864_+\|YchE-family-NAAT-transporter	gnl\|CDD\|236850	PRK11111, PRK11111, YchE family NAAT transporter.	1.32568e-137
NZ_CP022073.1\|WP_058669233.1\|3992255_3993260_+\|murein-tripeptide/oligopeptide-ABC-transporter-ATP-binding-protein-OppF	gnl\|CDD\|185037	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional.	0
NZ_CP022073.1\|WP_012132186.1\|3974488_3975199_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.81443e-88
NZ_CP022073.1\|WP_012132200.1\|3987635_3989267_+\|oligopeptide-ABC-transporter-substrate-binding-protein-OppA	gnl\|CDD\|185059	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional.	0
NZ_CP022073.1\|WP_012132196.1\|3981327_3981741_-\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.00904e-79

>NZ_CP022073.1|WP_058669235.1|3982282_3982900_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFEEIRAENAQQTIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDFRGELFGGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVSVCRKHYKEALAEGSLTSIQEKHRHA
>NZ_CP022073.1|WP_012132196.1|3981327_3981741_-|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSMAAVKSGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMEEQGKQLDDFLIKG
>NZ_CP022073.1|WP_012132194.1|3980290_3981199_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGNEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGCSQIMVEPVEDVTAYGVVDCKGAALAPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNSLGAEFKAWLEDELGIKK
>NZ_CP022073.1|WP_012132193.1|3979075_3980089_+|two-component-system-response-regulator-RssB
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGLDALELLGSFTPDLMICDLAMPRMNGLKLVEHLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVDNPVAAAKLLQELQPPVQQVISHCRINYRQLVAADKPGLVLDIAPLSDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNATLNTGSHQVQISNGVPLGTLGNTYLNQLSQRCESWQCQIWGAGGRLRLMLSAE
>NZ_CP022073.1|WP_012132192.1|3978079_3978985_+|patatin-like-phospholipase-RssA
MRKIKIGLALGSGAARGWSHIGVIKALKHMGIDIDIVAGCSIGSLVGAAYACNKLPALEQWVCSFSYWDVLRLMDLSWRRGGLLRGERVFNQYRNVMPVLDFEQCTRRFGTVATNLSTGRELWFTEGDLHLAVRASCSMPGLMSPVAHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLLSLNVSNDNDESDDSLSWHARLKERLSSMTSRRAVTAPTAMEIMTTSIQVLENRLKRNRMAGDPPDILIQPFCPQISTLDFHRASAAIAAGQLAVEKKMDELLPLVRTDV
>NZ_CP022073.1|WP_047464045.1|3977512_3977968_-|YchJ-family-protein
MSQLCPCGSAVEYSLCCGPIVSGERVAPDPSHLMRSRYCAFVMKDANYLIRTWHPACGATAFRDDIVAGFAHTEWLGLTIFEESGSDAENTGYVSFVARFIEQGIPGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCG
>NZ_CP022073.1|WP_049011367.1|3976617_3977460_-|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDVTLLADLDSALPEGSVRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVEISAVIGNHETLRPLVERFDIPFELVSHEGLTRDEHDKQMADAIDAHQPDYVVLAKYMRVLTPEFVSRFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNRTIIL
>NZ_CP022073.1|WP_012132187.1|3975198_3975876_+|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHFGILGIFAGHFLGMLTPHWMYEAFLPIEVKQKMAMIAGGACGVMTLVGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASEHLEGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQVVRARR
>NZ_CP022073.1|WP_012132186.1|3974488_3975199_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQELFDALASSENLDKEDAQSLAVFLRDLTAQEMLDVQASYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHGLQLDSRELPDHLPLYLEYLAQLPKNDALGGLQDIAPILALLGARLQQRESRYAVLFDLLLKLANTVIDSDKVAEKIADEVRDDTPQALDAVWEEEQVKFFAEQGCGESEISAHQRRFAGAVAPQYLNITTGGQQ
>NZ_CP022073.1|WP_012132179.1|3972768_3973419_-|two-component-system-response-regulator-NarL
MSNQEPATILLIDDHPMLRTGVKQLVSMAPDISVIGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDVTQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>NZ_CP022073.1|WP_047463440.1|3983063_3985739_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIIEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDVILKNGALNAAIVGQPAYKIAELAGFTVPETTKILIGEVTAVDDSEPFAHEKLSPTLAMYRAKDFEDAVDKAEKLVAMGGIGHTSCLYTDQDNQPERVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKENLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESVKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFTEGEVAAKKEAAAPKADKKAKKSA
>NZ_CP022073.1|WP_047464047.1|3986216_3986864_+|YchE-family-NAAT-transporter
MTQTLFDFPVYSKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDGILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAIRESIGVVPLALPLMAGPGAISSTIVWGTRYHTIMHLIGFSVAIALFAFCCWGVFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLLS
>NZ_CP022073.1|WP_012132200.1|3987635_3989267_+|oligopeptide-ABC-transporter-substrate-binding-protein-OppA
MSNITKKSLLAAGILTALIGGNVAMAADVPAGVQLSDKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWENKDFKVWTFHLRKNAKWSDGTPVTAHDFVYSWQRLANPNTASPYASYLQYGHIANIDDIIAGKKPATDLGVKAIDDNTFEVTLSEPVPYFYKLLVHPSVSPVPKAAVEKFGEKWTQPANIVTNGAYKLKNWVVNERIVLERNTQYWDNDKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKLAMDRDIIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFTWSQEKRNEEAKKLLAEAGYTADKPLTFDLLYNTSDLHKKLAIAVASIWKKNLGANVKLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPEFDKLIADTLKVTDEAQRTELYAKAEQQLDKDSAIVPLYYYVNARLVKPWVGGYTGKDPMDNIYVKNLYIIKH
>NZ_CP022073.1|WP_012132201.1|3989390_3990311_+|oligopeptide-ABC-transporter-permease-OppB
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERALPPEVLANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYTVNDLVASSFPVSAKLGAAAFFLAVIIGVSAGVIAALKQNTRWDYTVMGVAMTGVVIPSFVVAPLLVMIFAITLKWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIIFRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGTLTILFNAIVDVLYAVIDPKIRY
>NZ_CP022073.1|WP_047463442.1|3990325_3991234_+|oligopeptide-ABC-transporter-permease-OppC
MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLVVLVIIALFVTLAPMLSQFTYFDTDWGMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVVVGTLYGSLSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTVSIVVRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR
>NZ_CP022073.1|WP_058669234.1|3991245_3992259_+|murein-tripeptide/oligopeptide-ABC-transporter-ATP-binding-protein-OppD
MSVIETSTAPLAQQRANALLDVKDLRVTFSTPDGDVTAVNDLNFTLRGGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPERELNRLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPYAMEICSSTPPLEEFSPGRLRACFKPVEELV
>NZ_CP022073.1|WP_058669233.1|3992255_3993260_+|murein-tripeptide/oligopeptide-ABC-transporter-ATP-binding-protein-OppF
MNAVTLERKVLLEIADLKVHFDIKDGKQWFWQPAKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGRVAWLGKDLLGMKPDEWRDVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLPRQEVRDRVKAMMMKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTKALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
>NZ_CP022073.1|WP_012132205.1|3993323_3993653_-|YciU-family-protein
MEMDLNNRLTEDETLEQAYDIFLELAADNLDPADIILFNLQFEERGGAELFDPSEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDIFARVLLCREKDHKLCHILWRE
>NZ_CP022073.1|WP_012132206.1|3993687_3995148_-|cardiolipin-synthase
MTTFYTVVSWLVILGYWILIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVASSLFKLCERRQGIAGVKGNQLQLLTDSDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWAAMMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMVMIDNYIAYTGSMNMVDPRFFKQDAGVGQWVDLMARMEGPVATAMGIVYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLVIDDAGFGGDLAAVQDDYISRSRLLDARLWVKRPLWQRITERLFYFFSPLL
>NZ_CP022073.1|WP_012132207.1|3995290_3995464_+|YciY-family-protein
MKRSRTEVGRWRMQRQASRRKARWLEGQSRRNMRIHSIRKCILNHQRNTLLFAIHSI

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Crispr_ID: NZ_CP022073_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_14

4013724-4013847

Orphan

Consensus_repeat	Method
CGGACTGTTTTGTAGGCCGGATAAGGCGTAGCCGCCATCCGGCAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_14

>merge|NZ_CP022073|14|4013724-4013847|CRISPRCasFinder
CGGACTGTTTTGTAGGCCGGATAAGGCGTAGCCGCCATCCGGCAAACAGCCCGGTGGCGCTAACGCTTACCGGGTCTACGGACTGTTTTGTAGGCCGGATAAGGCGTAGCCGCCATCCGGCAAA

>NZ_CP022073|14|14|4013724-4013847|CRISPRCasFinder
CGGACTGTTTTGTAGGCCGGATAAGGCGTAGCCGCCATCCGGCAAA	CAGCCCGGTGGCGCTAACGCTTACCGGGTCTA
CGGACTGTTTTGTAGGCCGGATAAGGCGTAGCCGCCATCCGGCAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_012132223.1\|4010083_4010959_+\|23S-rRNA-pseudouridine(2605)-synthase-RluB	unknown	unknown	gnl\|CDD\|182659
NZ_CP022073.1\|WP_058669229.1\|4006647_4008210_-\|anthranilate-synthase-component-1	unknown	unknown	gnl\|CDD\|237428
NZ_CP022073.1\|WP_012132238.1\|4022075_4022666_-\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|234745
NZ_CP022073.1\|WP_012132233.1\|4018598_4018760_+\|YmiA-family-putative-membrane-protein	unknown	unknown	gnl\|CDD\|333720
NZ_CP022073.1\|WP_003020616.1\|4013859_4014111_-\|YciN-family-protein	unknown	unknown	gnl\|CDD\|182919
NZ_CP022073.1\|WP_058669224.1\|4019345_4022021_+\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP022073.1\|WP_047463550.1\|4023768_4024077_+\|lipopolysaccharide-assembly-protein-LapA	unknown	unknown	gnl\|CDD\|226294
NZ_CP022073.1\|WP_077956917.1\|4025442_4026180_+\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
NZ_CP022073.1\|WP_058669228.1\|4009362_4009983_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|183245
NZ_CP022073.1\|WP_047463536.1\|4008485_4009355_+\|5'-3'-exoribonuclease	unknown	unknown	gnl\|CDD\|223686
NZ_CP022073.1\|WP_058669225.1\|4014511_4017109_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236048
NZ_CP022073.1\|WP_058669226.1\|4011637_4012399_-\|YciK-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236357
NZ_CP022073.1\|WP_012132243.1\|4024083_4025253_+\|lipopolysaccharide-assembly-protein-LapB	unknown	unknown	gnl\|CDD\|225504
NZ_CP022073.1\|WP_012132231.1\|4017320_4018295_+\|HTH-type-transcriptional-regulator-CysB	unknown	unknown	gnl\|CDD\|183678
NZ_CP022073.1\|WP_012905981.1\|4008305_4008350_-\|trp-operon-leader-peptide	unknown	unknown	unknown
NZ_CP022073.1\|WP_012132219.1\|4005052_4006648_-\|bifunctional-anthranilate-synthase-glutamate-amidotransferase-component-TrpG/anthranilate-phosphoribosyltransferase-TrpD	unknown	unknown	gnl\|CDD\|181927
NZ_CP022073.1\|WP_012132240.1\|4022853_4023618_+\|phosphatidylglycerophosphatase-B	unknown	unknown	gnl\|CDD\|182658
NZ_CP022073.1\|WP_058669436.1\|4003690_4005049_-\|bifunctional-indole-3-glycerol-phosphate-synthase-TrpC/phosphoribosylanthranilate-isomerase-TrpF	unknown	unknown	gnl\|CDD\|236509
NZ_CP022073.1\|WP_024130302.1\|4012636_4013683_+\|protease-SohB	unknown	unknown	gnl\|CDD\|236978
NZ_CP022073.1\|WP_058669227.1\|4011050_4011641_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|235662

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_012132223.1\|4010083_4010959_+\|23S-rRNA-pseudouridine(2605)-synthase-RluB	gnl\|CDD\|182659	PRK10700, PRK10700, 23S rRNA pseudouridine(2605) synthase RluB.	0
NZ_CP022073.1\|WP_058669229.1\|4006647_4008210_-\|anthranilate-synthase-component-1	gnl\|CDD\|237428	PRK13564, PRK13564, anthranilate synthase component 1.	0
NZ_CP022073.1\|WP_012132238.1\|4022075_4022666_-\|GTP-cyclohydrolase-II	gnl\|CDD\|234745	PRK00393, ribA, GTP cyclohydrolase II RibA.	6.9548e-150
NZ_CP022073.1\|WP_012132233.1\|4018598_4018760_+\|YmiA-family-putative-membrane-protein	gnl\|CDD\|333720	NF000536, YmiA, YmiA family putative membrane protein.	1.06932e-20
NZ_CP022073.1\|WP_003020616.1\|4013859_4014111_-\|YciN-family-protein	gnl\|CDD\|182919	PRK11037, PRK11037, hypothetical protein; Provisional.	1.57225e-57
NZ_CP022073.1\|WP_058669224.1\|4019345_4022021_+\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP022073.1\|WP_077956917.1\|4025442_4026180_+\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	2.13645e-138
NZ_CP022073.1\|WP_058669228.1\|4009362_4009983_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|183245	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase.	5.02637e-154
NZ_CP022073.1\|WP_012132231.1\|4017320_4018295_+\|HTH-type-transcriptional-regulator-CysB	gnl\|CDD\|183678	PRK12681, cysB, HTH-type transcriptional regulator CysB.	0
NZ_CP022073.1\|WP_058669225.1\|4014511_4017109_+\|type-I-DNA-topoisomerase	gnl\|CDD\|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0
NZ_CP022073.1\|WP_058669226.1\|4011637_4012399_-\|YciK-family-oxidoreductase	gnl\|CDD\|236357	PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional.	0
NZ_CP022073.1\|WP_012132243.1\|4024083_4025253_+\|lipopolysaccharide-assembly-protein-LapB	gnl\|CDD\|225504	COG2956, COG2956, Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism].	0
NZ_CP022073.1\|WP_047463550.1\|4023768_4024077_+\|lipopolysaccharide-assembly-protein-LapA	gnl\|CDD\|226294	COG3771, COG3771, Predicted membrane protein [Function unknown].	2.81107e-44
NZ_CP022073.1\|WP_047463536.1\|4008485_4009355_+\|5'-3'-exoribonuclease	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	6.12485e-98
NZ_CP022073.1\|WP_012132219.1\|4005052_4006648_-\|bifunctional-anthranilate-synthase-glutamate-amidotransferase-component-TrpG/anthranilate-phosphoribosyltransferase-TrpD	gnl\|CDD\|181927	PRK09522, PRK09522, bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD.	0
NZ_CP022073.1\|WP_012132240.1\|4022853_4023618_+\|phosphatidylglycerophosphatase-B	gnl\|CDD\|182658	PRK10699, PRK10699, phosphatidylglycerophosphatase B; Provisional.	6.7866e-155
NZ_CP022073.1\|WP_058669436.1\|4003690_4005049_-\|bifunctional-indole-3-glycerol-phosphate-synthase-TrpC/phosphoribosylanthranilate-isomerase-TrpF	gnl\|CDD\|236509	PRK09427, PRK09427, bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF.	0
NZ_CP022073.1\|WP_024130302.1\|4012636_4013683_+\|protease-SohB	gnl\|CDD\|236978	PRK11778, PRK11778, putative inner membrane peptidase; Provisional.	0
NZ_CP022073.1\|WP_058669227.1\|4011050_4011641_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|235662	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase.	2.02485e-120

>NZ_CP022073.1|WP_024130302.1|4012636_4013683_+|protease-SohB
MELLSEYGLFLAKIVTVVVAIAVIVMLIVNAAQRKRQRGELRVTNLSEQYKEMKDDLATALMDGHQQKLWHKAQKKKLKLEAKAAKAKAKQGENAATGKPRAWVLDFKGSMDAHEVSALREEVTAVLAAFKPQDQVVVRLESPGGVVHGYGLAASQLQRLRDKQIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQIPNFNRFLKGKDIDIELHTAGQYKRTLTLLGENTEEGRQKFREDLNETHHLFKHFVQQMRPVLDIEQVATGEHWYGQQALEKGLVDEINTSDDVILRLMDGYEVFNVRFMQRKKLMDRFTGSAAESADRLLLRWWQRGQKPLM
>NZ_CP022073.1|WP_058669226.1|4011637_4012399_-|YciK-family-oxidoreductase
MHYQPKQDLLQNRIILITGASDGIGREAALTYARYGANVILLGRNEEKLRQVAQTVAEDTGALPQWFTLDLLTCTAEECHQLGQRIAAHYPRLDGVLHNAGLLGDICPMSEQNPHVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNHPLRVNCINPGGTRTSMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIAQ
>NZ_CP022073.1|WP_058669227.1|4011050_4011641_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MTEERYQQRQQRVKDRVDARVAAAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLESHGVEFQVMATGFTWETQNRETDTAACMAVWEHGKRMLADPTLDMVVLDELTYMVAYDYLPLEEVINALNARPQNQTVIITGRGCHRDILELADTVSELRPVKHAFEAGVKAQMGIDY
>NZ_CP022073.1|WP_012132223.1|4010083_4010959_+|23S-rRNA-pseudouridine(2605)-synthase-RluB
MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIATLGDRVEITPGLKIRIDGHLISVKESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVQLAPETTSKVAVEKDRRRMKANQIRRAVKRHSQVGGGRRSGGRNNNG
>NZ_CP022073.1|WP_058669228.1|4009362_4009983_+|threonylcarbamoyl-AMP-synthase
MSQFFYIHPENPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRHLPDGHNFTLMCRDLSELSTYSFVDNVAFRLIKNNTPGNYTFILKGTKDVPRRLLQEKRKTIGLRVPSNPIAIALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQQPTTVIDLTDDSPVVLREGVGDVKPFL
>NZ_CP022073.1|WP_047463536.1|4008485_4009355_+|5'-3'-exoribonuclease
MSDTNYAVIYDLHSHTTASDGRLTPEALVHRAVEMRVGTLAITDHDTTAAIPAAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDIAHPAMCAFLAEQTERRQQRARLIAERLEKAHIPGAWEGALRLADGGAVTRGHFARFLVECGKAGSIADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYDLSAKWLKRLIAYFALHRGDAMEVAQCQQSPNERTQLATYARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEEPQTPQ
>NZ_CP022073.1|WP_012905981.1|4008305_4008350_-|trp-operon-leader-peptide
MKATFVLHGWWRTS
>NZ_CP022073.1|WP_058669229.1|4006647_4008210_-|anthranilate-synthase-component-1
MQIQKPTLELLSCNAAYRENPTALFHQVCGDRPATLLLESADIDSKNDLKSLLLVDSALRITALGDTVTIEALTDNGASLLPLLDAALPAGVENTAQPGNRKLRFPAVSPLLDEDARLCSLSVFDAFRLLQNLVNVPAEEREAMFFGGLFAYDLVAGFEALPQLEAGNRCPDYCFYLAETLMVIDHQKKSTRIQASLFTDNEAEKQRLTARLAQLTQQLTEPAPPLPVTPVPQMRCECSQSDEEFGAVVRTMQKAIRAGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSFVMHLVSRVVGELRSDLDVLHAYRACMNMGTLSGAPKVRAMQLIAGAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVEDGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAIATAHHAQEIF
>NZ_CP022073.1|WP_012132219.1|4005052_4006648_-|bifunctional-anthranilate-synthase-glutamate-amidotransferase-component-TrpG/anthranilate-phosphoribosyltransferase-TrpD
MADILLLDNIDSFTYNLADQLRANGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMFAGLVNPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDTDRVCGFQFHPESILTTQGALLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTMTQQESHQLFSAVVRGELKPEQLAAALVSMKVRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDDLGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKGEAAHEAAVAANVAMLMRLHGKEDLKANAQTVIDVLRSGAAYDRVTALAARG
>NZ_CP022073.1|WP_058669436.1|4003690_4005049_-|bifunctional-indole-3-glycerol-phosphate-synthase-TrpC/phosphoribosylanthranilate-isomerase-TrpF
MQTVLAKIVADKAIWVEARKQQQPLASFQNEVQPSARHFYDALQGTRTAFILECKKASPSKGVIRDDFDPAQIAGVYKHYASAISVLTDEKYFQGSFDFLTVVSRIAPQPVLCKDFIIDPYQIYLARYYQADACLLMLSVLDDEQYRQLSAVAHSLKMGVLTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRQLAPKLGHGVTVISESGINTYAQVRELSHFANGFLIGSALMSHADLHAAVRRVLLGENKVCGLTRGQDAKAAYEAGAIYGGLIFVPSSPRVVNLDQAREVIAAAPLQYVGVFRNTAITEVCEKATTLSLKAVQLHGSEDQAYVDALRAALPEQVQIWKALSVGDALPARDYQHVDKYVLDNGQGGSGQCFDWSLLNGETLDNVLLAGGLGADNCVEAAKTGCAGLDFNSGVESQPGIKDAHLLASVFQTLRAY
>NZ_CP022073.1|WP_003020616.1|4013859_4014111_-|YciN-family-protein
MHKDTQPIDRETLLIEANKIIREHEDTLAGIVATGVTQRNGVLVFSGDYFLDEQGLPTPKSTAVFNMFKHLAHVLSEKYHLID
>NZ_CP022073.1|WP_058669225.1|4014511_4017109_+|type-I-DNA-topoisomerase
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWDAQYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDTRYSRVVFNEITKNAIRQAFDKPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEFWEVSASTTTPSGDALPLDVTHQNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDSFGKKYLPESPNQYASKENSQEAHEAIRPSDVAVMAEALKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDVLTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMEDSLDKVASHEAEWKNVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKRRCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIFLAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYVAAEKDGKATGWSAFFVDGKWVEGKK
>NZ_CP022073.1|WP_012132231.1|4017320_4018295_+|HTH-type-transcriptional-regulator-CysB
MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLAAKSSVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDPISDPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVVDTAVALRSNEEIEAMFNDIKLPEK
>NZ_CP022073.1|WP_012132233.1|4018598_4018760_+|YmiA-family-putative-membrane-protein
MISDADCMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVIALVIWQVWG
>NZ_CP022073.1|WP_058669224.1|4019345_4022021_+|aconitate-hydratase-AcnA
MSSTLREASKDTLQAKDKTYHYYSLPLAAKKLGDITRLPKSLKVLLENLLRWQDGDSVTEEDIQALAGWLKKAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDDAFEENVRLEMERNHERYVFLKWGQQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQAGEWVAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFRLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDGITLEYMRLSGRSEEQVELVETYAKAQGMWRNPGDEPVFTSSLELDMGDVEASLAGPKRPQDRVALADVPKAFAASTELELNTAQKDRQPIDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAQAKLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIETAIKKGDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNINLAKEPLGHDRKGDPVYLKDIWPSAQEIARAVELVSSEMFHKEYAEVFEGTPEWKAINVDRSDTYGWQDDSTYIRLSPFFDEMQVQPDPVEDIHGARILAMLGDSVTTDHISPAGSIKADSPAGRYLQNHGVERRDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTRHLPGTEVISIYDAAMLYQQEKTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEETIDIASLQNLKPGAAIPVTLTKVDGSTEVISCRCRIDTATELTYYQNDGILHYVIRNMLH
>NZ_CP022073.1|WP_012132238.1|4022075_4022666_-|GTP-cyclohydrolase-II
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGQTPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLGK
>NZ_CP022073.1|WP_012132240.1|4022853_4023618_+|phosphatidylglycerophosphatase-B
MLSIAKRTTVGAALLLVMPVSVWISGWNWQPGHSVWWLKSLYWVTETVTQPWGIITHVLLCAWFLWCLRFRLKAAMMLFAILAGAILLGQGVKSLVKERVQEPRPFVIWLEKTHHIPVDEFYTLKRKERGHLVKEQLSGQQDIPAFLRQHWQKETGFAFPSGHTLFAASWALLAVGLLWPRRRTLTIAILLVWATSVMGSRLLLGMHWPRDLVVATLISWLLVTLATWLAQRICGPLTPPVEEAREIAQREQER
>NZ_CP022073.1|WP_047463550.1|4023768_4024077_+|lipopolysaccharide-assembly-protein-LapA
MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLVRAERKIKRLENQLSPATDVAVSADSSVVKE
>NZ_CP022073.1|WP_012132243.1|4024083_4025253_+|lipopolysaccharide-assembly-protein-LapB
MLELLFLLLPVAAAYGWYMGRRSAQQTKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLTDETDFRVGALQQLLQIYQATSDWQKAIDVAERLVKLGKDKQRIEIAHFYCELALQQMGCDDMDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRVISQDKELVSETLEMLQTCYQQLGKNDEWAEFLRRAVEENTGAAAELMLADILEAREGHDTAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEQVRSKPRYRCQKCGFTAYTMYWHCPSCRAWSTIKPIRGLDGQ
>NZ_CP022073.1|WP_077956917.1|4025442_4026180_+|orotidine-5'-phosphate-decarboxylase
MTFTASSSSRAVTDSPVVVALDYNNRDNALAFVDRIDPCDCRLKVGKEMFTLFGPQLVRDLQQRGFDIFLDLKFHDIPNTTAHAVAAAADLGVWMVNVHASGGARMMTAAREALLPLGKDAPLLIAVTVLTSMEASDLADLGVTLSPAEHAERLARLTQNCGLDGVVCSAQEAVRFKQEFGTEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYMVIGRPVTQSADPAQTLKAINASLKRGA

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Crispr_ID: NZ_CP022073_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_15

4080943-4081085

Unclear

Consensus_repeat	Method
AAAGTCGTGCGTGGCGAGCTTAAGCAGCAGGGTGATTCCCTGCG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP022073_15

>merge|NZ_CP022073|15|4080943-4081085|CRISPRCasFinder
AAAGTCGTGCGTGGCGAGCTTAAGCAGCAGGGTGATTCCCTGCGTGGTGAAATCGGCAGCGCCAAAAGGGATGCCTACGCACGGGCCGACAGTAATGCAAAAGCCGTGCGTGGCGAGCTTAAGCAGCAGGGTGATTCCCTGCG

>NZ_CP022073|15|15|4080943-4081085|CRISPRCasFinder
AAAGTCGTGCGTGGCGAGCTTAAGCAGCAGGGTGATTCCCTGCG	TGGTGAAATCGGCAGCGCCAAAAGGGATGCCTACGCACGGGCCGACAGTAATGCA
AAAGCCGTGCGTGGCGAGCTTAAGCAGCAGGGTGATTCCCTGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_125336919.1\|4079788_4080424_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022073.1\|WP_012132297.1\|4071530_4071749_-\|KTSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|379296
NZ_CP022073.1\|WP_012132309.1\|4082096_4082540_+\|DUF417-family-protein	unknown	unknown	gnl\|CDD\|282127
NZ_CP022073.1\|WP_077956902.1\|4087671_4088313_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP022073.1\|WP_058669204.1\|4073412_4076937_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP022073.1\|WP_012132304.1\|4078011_4079001_-\|D-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|240659
NZ_CP022073.1\|WP_047463577.1\|4069866_4070802_-\|tRNA-2-thiocytidine(32)-synthetase-TtcA	unknown	unknown	gnl\|CDD\|236737
NZ_CP022073.1\|WP_060816077.1\|4090062_4091349_+\|phosphatase-PAP2/dual-specificity-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350376
NZ_CP022073.1\|WP_012132296.1\|4071020_4071455_-\|universal-stress-protein-UspF	unknown	unknown	gnl\|CDD\|184967
NZ_CP022073.1\|WP_047463593.1\|4086750_4087668_+\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|226955
NZ_CP022073.1\|WP_058669202.1\|4081587_4082049_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|99777
NZ_CP022073.1\|WP_058669205.1\|4071890_4073048_-\|porin-OmpC	unknown	unknown	gnl\|CDD\|182543
NZ_CP022073.1\|WP_058669201.1\|4082884_4085524_+\|YdbH-family-protein	unknown	unknown	gnl\|CDD\|182654
NZ_CP022073.1\|WP_047463583.1\|4077475_4077898_-\|heat-shock-protein-HslJ	unknown	unknown	gnl\|CDD\|182470
NZ_CP022073.1\|WP_060937479.1\|4085520_4085703_+\|YnbE-family-lipoprotein	unknown	unknown	gnl\|CDD\|379294
NZ_CP022073.1\|WP_058669206.1\|4068397_4069771_+\|ATP-dependent-RNA-helicase-DbpA	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236977
NZ_CP022073.1\|WP_024130313.1\|4085710_4086034_+\|YdbL-family-protein	unknown	unknown	gnl\|CDD\|226307
NZ_CP022073.1\|WP_060816076.1\|4088305_4090066_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|371922
NZ_CP022073.1\|WP_012132302.1\|4077212_4077479_+\|DUF333-domain-containing-protein	unknown	unknown	gnl\|CDD\|225584
NZ_CP022073.1\|WP_047463591.1\|4086148_4086754_+\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_012132297.1\|4071530_4071749_-\|KTSC-domain-containing-protein	gnl\|CDD\|379296	pfam13619, KTSC, KTSC domain. This short domain is named after Lysine tRNA synthetase C-terminal domain. It is found at the C-terminus of some Lysyl tRNA synthetases as well as a single domain in bacterial proteins. The domain is about 60 amino acids in length and contains a reasonably conserved YXY motif in the centre of the sequence. The function of this domain is unknown but it could be an RNA binding domain.	1.71444e-20
NZ_CP022073.1\|WP_047463591.1\|4086148_4086754_+\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	8.49093e-27
NZ_CP022073.1\|WP_012132309.1\|4082096_4082540_+\|DUF417-family-protein	gnl\|CDD\|282127	pfam04224, DUF417, Protein of unknown function, DUF417. This family of uncharacterized proteins appears to be restricted to proteobacteria.	1.18088e-18
NZ_CP022073.1\|WP_077956902.1\|4087671_4088313_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	9.24641e-42
NZ_CP022073.1\|WP_058669204.1\|4073412_4076937_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP022073.1\|WP_012132304.1\|4078011_4079001_-\|D-lactate-dehydrogenase	gnl\|CDD\|240659	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains. D-Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate, and is a member of the 2-hydroxyacid dehydrogenase family. LDH is homologous to D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH) and shares the 2-domain structure of formate dehydrogenase. D-2-hydroxyisocaproate dehydrogenase-like (HicDH) proteins are NAD-dependent members of the hydroxycarboxylate dehydrogenase family, and share the Rossmann fold typical of many NAD binding proteins. HicDH from Lactobacillus casei forms a monomer and catalyzes the reaction R-CO-COO(-) + NADH + H+ to R-COH-COO(-) + NAD+. D-HicDH, like the structurally distinct L-HicDH, exhibits low side-chain R specificity, accepting a wide range of 2-oxocarboxylic acid side chains. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain.	0
NZ_CP022073.1\|WP_047463577.1\|4069866_4070802_-\|tRNA-2-thiocytidine(32)-synthetase-TtcA	gnl\|CDD\|236737	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional.	0
NZ_CP022073.1\|WP_060816077.1\|4090062_4091349_+\|phosphatase-PAP2/dual-specificity-phosphatase-family-protein	gnl\|CDD\|350376	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases. This subfamily is composed of uncharacterized bacterial and plant dual-specificity protein phosphatases. DUSPs function as a protein-serine/threonine phosphatases (EC 3.1.3.16) and a protein-tyrosine-phosphatases (EC 3.1.3.48).	1.13144e-37
NZ_CP022073.1\|WP_012132296.1\|4071020_4071455_-\|universal-stress-protein-UspF	gnl\|CDD\|184967	PRK15005, PRK15005, universal stress protein UspF.	4.25584e-95
NZ_CP022073.1\|WP_047463593.1\|4086750_4087668_+\|phosphatidate-cytidylyltransferase	gnl\|CDD\|226955	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only].	1.64988e-129
NZ_CP022073.1\|WP_058669202.1\|4081587_4082049_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	3.53457e-09
NZ_CP022073.1\|WP_058669205.1\|4071890_4073048_-\|porin-OmpC	gnl\|CDD\|182543	PRK10554, PRK10554, outer membrane porin protein C; Provisional.	2.20194e-170
NZ_CP022073.1\|WP_058669201.1\|4082884_4085524_+\|YdbH-family-protein	gnl\|CDD\|182654	PRK10695, PRK10695, YdbH family protein.	0
NZ_CP022073.1\|WP_047463583.1\|4077475_4077898_-\|heat-shock-protein-HslJ	gnl\|CDD\|182470	PRK10449, PRK10449, heat shock protein HslJ.	2.98667e-87
NZ_CP022073.1\|WP_060937479.1\|4085520_4085703_+\|YnbE-family-lipoprotein	gnl\|CDD\|379294	pfam13617, Lipoprotein_19, YnbE-like lipoprotein. This family includes lipoproteins similar to E. coli YnbE. Protein in this family are typically 60 amino acids in length and contain an N-terminal lipid attachment site, which has been included in the alignment to increase sensitivity. The specific function of these proteins is unknown.	7.82147e-14
NZ_CP022073.1\|WP_058669206.1\|4068397_4069771_+\|ATP-dependent-RNA-helicase-DbpA	gnl\|CDD\|236977	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional.	0
NZ_CP022073.1\|WP_024130313.1\|4085710_4086034_+\|YdbL-family-protein	gnl\|CDD\|226307	COG3784, COG3784, Uncharacterized protein conserved in bacteria [Function unknown].	1.10783e-44
NZ_CP022073.1\|WP_060816076.1\|4088305_4090066_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|371922	pfam12147, Methyltransf_20, Putative methyltransferase. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The family shows homology to methyltransferases.	3.78114e-172
NZ_CP022073.1\|WP_012132302.1\|4077212_4077479_+\|DUF333-domain-containing-protein	gnl\|CDD\|225584	COG3042, Hlx, Putative hemolysin [General function prediction only].	8.30478e-15

>NZ_CP022073.1|WP_125336919.1|4079788_4080424_+|hypothetical-protein
MYAMNLSMNKPGTVSKITLLNKPISITENTCSTCSLLEQLHRYPSATVVIYGRPSLFLSFWLHVRECYPCAALIFKHGYFLPVDETIAEFFNYFTIEGRSGVKHHDKTIQRVIYFLPPVLLRKESVQDTAYLTDTVPLLNEITHARLSSGRLSKLSKRVLALILSGFSREMIAINLKVGIRQVWLIENFLRKRWRIPDGCSLVESVYFYNR
>NZ_CP022073.1|WP_012132304.1|4078011_4079001_-|D-lactate-dehydrogenase
MKLAVYSTKQYDKKYLQHVNESFGFELEFFDFLLTEKTAKTANGCEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLQVVRVPAYSPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMHGKTAGVIGTGKIGVAALRILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFAESDVISLHCPLTAENYHLLNHAAFDQMKNGVMVINTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLTAEALTSISETTLQNLEQLSKGETCPNALF
>NZ_CP022073.1|WP_047463583.1|4077475_4077898_-|heat-shock-protein-HslJ
MKKIVALVALSMLMAGCVSNGKVSVNRDQLQHHRFVLESVNGKPVAAGKNAPELSFGEKMTVSGRMCNRFSGQGKLSDGELKVKEMAMTRMMCADPQLNELDHTISAMLKQGAQVDLTANQLTLATAEQTLMFRLADLVH
>NZ_CP022073.1|WP_012132302.1|4077212_4077479_+|DUF333-domain-containing-protein
MRAAFLVGCAALLLSACSNEPVQQATAAHVAPGLKAAMSSSGEANCAMIGGSLSVARQLDGSAIGMCALPNGKRCSEQSLAAGSCGSY
>NZ_CP022073.1|WP_058669204.1|4073412_4076937_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEGGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGQLTPFVLHVAARTIATHALSIFGDHSDVMAVRQTGCAMLSAGSVQEAQDFALISQIATLKSRVPFIHFFDGFRTSHEINKIVPLADDTILKLMPQAEIDAHRSRALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVEQAMNDFAGATGRQYKPFEYYGHPQAERVIILMGSAIGTCEEVVDELLARGEKVGVLKVRLFRPFSAKHLLQALPETVRTVAVLDRTKEPGAQAEPLYLDVMTALAEAFNSGERETLPRVIGGRYGLSSKEFGPDCVLAVFNELASARPKSRFTVGIYDDVTNLSLPLPENTLPGTAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYLVAQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYNADEVWARLPQEVQAVLNQKKARFFVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQELVERNWQALALARESVTEVPLQAVDPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVSPEAMENAPASLHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKVNYDFFLNLPEIDKSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVMRLLEQFADRIPTDLNDALHADATPEVRREQVAALRQHLKDVDGAHELLTDADALIEKSIWLIGGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSDALAETLLNEQRFRRLNAQQPDVAEQLWKDATADLQKRYDFLAQLAGKAEKSGAE
>NZ_CP022073.1|WP_058669205.1|4071890_4073048_-|porin-OmpC
MKRKVLALVIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDDANSDGDQTYMRMGFKGETQVNDMITGYGQWEYQVNANTTEGDHGNSFTRLAFAGLKFGDYGSFDYGRNYGVLYDVEGWTDMLPEFGGDSYTKADNFMTGRANGVATYRNTDFFGLVNGLSFALQYQGANENQVTDEDADYISGTAQEGTGNGGDRSVQNSNGDGFGISTTYDLGMGASVGAAYTTSDRTNQQVNYGGNVAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPYGSMDKEGGVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGKDLNNTDGDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDQFYKNAGISTDDVVALGMVYQF
>NZ_CP022073.1|WP_012132297.1|4071530_4071749_-|KTSC-domain-containing-protein
MNHHPVKSSRIASVGYDETSSTLEIRFHRTGTLQYLGVPSRIFRDFLVVVSKGRFYDGVIKGKFPEQKPNSR
>NZ_CP022073.1|WP_012132296.1|4071020_4071455_-|universal-stress-protein-UspF
MSRTILVPIDISDSELTQRVITHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFSIPADRVQIHIAEGSPKDKILEMAKKLPADMVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
>NZ_CP022073.1|WP_047463577.1|4069866_4070802_-|tRNA-2-thiocytidine(32)-synthetase-TtcA
MSQNQDISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPVNFSLVAVNLDQKQPGFPEHILPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIERFSEAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLSDINLFDFKGINHDSDVVDGGDLAFDREEIPLQPAGWQPEEDDNQLDELRLNVVEVK
>NZ_CP022073.1|WP_058669206.1|4068397_4069771_+|ATP-dependent-RNA-helicase-DbpA
MTAFSTLNVLPAAQLENLNELGYLEMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQHIDASLFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPSRRQTLLFSATWPEAIAAISGRVQQNPLTIEIDSVDALPSIEQQFFETSSQGKIPLLQKLLSQHQPASCVVFCNTKKDCQAVCDALNSVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILSEMLQLKLNWLTPPGNVPVVPLEAEMATLCIDGGKKAKMRPGDVLGALTGGIGLDGADIGKITVHPAHVYVAVRQPVAQKAWKQLQNGKIKGKSCRVRLLK
>NZ_CP022073.1|WP_058669202.1|4081587_4082049_+|helix-turn-helix-domain-containing-protein
MKIIIATHDFYFQQGAEVLFNSCEALGVEHFNSEKETYFIICDNEFAGLISILFYGYDFYLACKSEPCNMKHGSCLNDQDKSLTHNERIIAFLLYYKHFSVEQIARVRGRSKKTVYSHIYNIKKKIGLKNGMHLPFKSNGIDRNAFFELIFPI
>NZ_CP022073.1|WP_012132309.1|4082096_4082540_+|DUF417-family-protein
MKNFINRFIRSDYDIVILRLSVIGVFMLFGTYKWFDFEVMALEPLISSTWLNILYLIFGVHGGSYFLGVMETITFLALIIGFARPGVGISGDLIVITTGVTTLSLLPQLGKIDSFIIKDVLLIGAGAVLLKYDLTRYLAFRNGTYRV
>NZ_CP022073.1|WP_058669201.1|4082884_4085524_+|YdbH-family-protein
MKGKYKAVLALLLLLILIPLTLLMTLGLWLPTLAGIWLPVGTRIALDESPKLTRHGLHIPELRYLVEDCPLARMSGAELTHPSRWQLNIGTLELDSACLAKLPESEPSPAAPRTLAEWQSMLPNTWVNIDRLILSPWQEWQGKLSLSLTPALQQIRYQGEKVNFQGRLHGQNFTVSQLEVSAFENQPPVKLEGEFTLPLVPDGLPVNGHAVATLSLPQEPSLVDAELEWRDNAGQLIVMARGNPEPLLDLPWQVTRQQLAISDGRWNWPYQGFPLSGRLGININNWQAGLENAVISGRLNVLTQGDAGKGNAVLTIGPGKLSMDNSDMPLRLTGEAKQDDLIFYAVLPTQLTGSLADPQLTFEPGALLRSRGRVIDSLDIDEIRWPLAGVKVTQRGVDGRLQAILRAHENKMGDFVLHLDGLANDFLPDAGRWQWRYWGEGSFTPMNAGWDVAGKGEWHDNTITLTDLSTGFDQLQYGTMTVASPRLVLDKPIVWVRDAGNPTFSGALSLDAGNTVFTGGSVLPPSTLKFSVEGTDPTVFQFKGDLHAGAIGPVRVNGRWDGIRLRGQAWWPKQSVTVFQPLLPPDWKMNLRAGELYAQVAFSAAEDQGFEAGGHGVLKGGSAWMPDNQINGVDFVLPFRFSQGAWQLGTRGPVSLRIAEVVNQVTAKNITADLQGGYPWSEENPLLLSDVSVDVLGGKIIMKQLRMPQHDPALLRVQNVSSSELISAVNPKQFAMSGPVSGALPLWLSNEKWIIKDGWLTNPGPMTLRIDKDTADAVVKDNMAAGAAINWLRYMEIARSWTKINLDNLGVLTMQATVTGKSHVDGKVGTVNLNYTHEENVFTLWRSLRFGDNLQAWLEQNTALPETRCPEGKECEEQQ
>NZ_CP022073.1|WP_060937479.1|4085520_4085703_+|YnbE-family-lipoprotein
MKTMIAMLALFLLAGCTPRIEVAAPKEPITINMNVKIEHEIHIKVDKDVERLLKSRSDLF
>NZ_CP022073.1|WP_024130313.1|4085710_4086034_+|YdbL-family-protein
MKKQLRATVLILSLLSCNAIALTLSEARTQGRVGETLNGYLVALATDPETRSLVSEINKERSASYQQLAKSHQIPVDEVAKMAGQKLVDRAKPGEYVQGINGKWLKK
>NZ_CP022073.1|WP_047463591.1|4086148_4086754_+|CDP-alcohol-phosphatidyltransferase-family-protein
MTLYQIKPAFQALLRPLMFWLYKHHATANHVTLAAMALSLITGAVLVFFPHPDLFFLLPVVLFVRMALNALDGMLARECNQKSRPGAILNETGDVLSDVALYLPFMLLPYSNTLLVLLMLFCAAMTEFCGVLAQTINGVRSYAGPLGKSDRALVFGAWGLGLAIWPELLHWNNAVWGVAIVLLLWTVINRCRSALHDEEAK
>NZ_CP022073.1|WP_047463593.1|4086750_4087668_+|phosphatidate-cytidylyltransferase
MMLLEKSLAVIFALLLVATVVNGLLVLLRPGKDWQELTLRIRTWWVIIVLFSLAMLSPQWLALTFFALVSFIALKEFLTLAPSRQSDRMPLLWMFIAIPINYWLIGIGWYGMFVVFIPVYVFLFLPARMVLTGDTQGFLRTASQLHWSLMTTVFAFSHVAFLLVLPADGLQTGALLVLFLVGLTEFNDIAQYLWGKSLGRIRVIPKVSPNKTLAGLLGGVVTTAVAAMILGPLLTPLNWPMALLAGVIIGITGFCGDVVMSAIKRDIGVKDSGTLLPGHGGILDRLDSLIFTAPVFFHFIRYFCY
>NZ_CP022073.1|WP_077956902.1|4087671_4088313_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MMTRILRPLFALCIVWPIMWLWLGLRVKYQERLPKSGPAIVVANHNSHMDVFALLSLFPLCRQAEVHPVAAADYFLRNKIMAWFALNILNIIPISRKGGEANPLALCEQALREGKTLILFPEGTRGEAGKLSPLKSGLWHLSQSMPEVPIIPVWLRGTERVMAKGNRIPLPLFIGVTVGNALSFNSDKNTFMDDLKCQLVALSQQTTGSHSHD
>NZ_CP022073.1|WP_060816076.1|4088305_4090066_+|alpha/beta-fold-hydrolase
MINTRAPEERQFLTSDNVELFYRYWPATSAGATPKVIVLFHRGHEHSGRLQHIIDELAMPDTAFYAWDARGHGRSPGPRGYSPSLARSVLDVDEFVRFVATDSQASIEDVVVVAQSVGAVLAATWVHDYAPTIRGLVLASPAFKVKLYVPFARSGLALMHRLRGLFFVNSYVKGKYLTHDPARVASFNQDPLVTRPIAVNILLDLYKTAERIVSDASAITLPVQMLVSGEDYVVHRQPQIDFYQRLRNPLKEIHILPGFYHDTLGEKERHLAFDKMRVFIDTLYALPPQRFDYSDEDRWSPGADTWRMLSGGPEPYSLNDIAYRTLRYGMKMLGTQSTGVRLGFETGFDSGSTLDYVYRNQPQGSSALGRLIDKNYLNSVGWKGIRQRKIHMQMLIQHAVAKLAEQGTTVRVVDVAAGHGRYVLDALESETAVDEILLRDYSELNVARGQEMIASRAMAARARFERGDAFNREELAALLPRPTLGIVSGLYELFPENTLVRNSLAGLADAIEPGGILIYTGQPWHPQLKTIAWSLTSHKDGKAWVMRVRTQGEMDALVWEAGFDKCAQLIDGWGIFTVSMAVRRAS
>NZ_CP022073.1|WP_060816077.1|4090062_4091349_+|phosphatase-PAP2/dual-specificity-phosphatase-family-protein
MTTRRSVYRQGIGWLLLLAPFFFLTYGQVNQFTAGRDNISSLVFEWERHIPFVPLTIIPYWSLDLLYGLSLFVCTTLNEQRRLVCKLVLASLIACIGFLLFPLQFTFTRPEITGPAGWLFGQLERFDLPYNQSPSLHIILCWLLWRHFHRHLKGKWQALNGGWFLLIAVSVLTTWQHHFIDVITGLAVGMVIDWLIPGQGQWRWRIASGKRKVLATRYLFGVLACLAGTFVTPWLWWPTLALLIVALAYGALGVEALQKDRTGRLTPAAWWLLFPWRLGMMLSMHCYTRRLPAVSPLVDGLFLGAYPCRPVEQQAVLDLTGEFPRSHASQDVVYCCVPMLDLVKPDYDTLYQAVGSLEQLRITHGSVLIHCALGLSRSALVGAAWLLYRYPGLGVDDAVDRLRKTRPQVVFTSEHLELLKQWKTEVTT

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Crispr_ID: NZ_CP022073_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_16

4408157-4408275

Orphan

Consensus_repeat	Method
CTGCATAACGCCCGTAGGCCCGATAAGCGAAGCGCCATCGGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_16

>merge|NZ_CP022073|16|4408157-4408275|CRISPRCasFinder
CTGCATAACGCCCGTAGGCCCGATAAGCGAAGCGCCATCGGGCGCGAACGTACCGCCTTATCCGGCCTACATCGCTGCATAACTCCCGTAGGCCCGATAAGCGAAGCGCCATCGGGCGC

>NZ_CP022073|16|16|4408157-4408275|CRISPRCasFinder
CTGCATAACGCCCGTAGGCCCGATAAGCGAAGCGCCATCGGGCGC	GAACGTACCGCCTTATCCGGCCTACATCG
CTGCATAACTCCCGTAGGCCCGATAAGCGAAGCGCCATCGGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_012132630.1\|4406715_4407057_-\|osmotically-inducible-lipoprotein-OsmE	unknown	unknown	gnl\|CDD\|183058
NZ_CP022073.1\|WP_060816195.1\|4414656_4415877_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|183486
NZ_CP022073.1\|WP_012132622.1\|4400708_4400951_-\|cell-division-activator-CedA	unknown	unknown	gnl\|CDD\|182246
NZ_CP022073.1\|WP_024130389.1\|4406094_4406415_-\|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|182499
NZ_CP022073.1\|WP_012132639.1\|4413625_4414660_-\|arginine-N-succinyltransferase	unknown	unknown	gnl\|CDD\|182474
NZ_CP022073.1\|WP_012132633.1\|4408288_4408864_-\|environmental-stress-induced-protein-Ves	unknown	unknown	gnl\|CDD\|236905
NZ_CP022073.1\|WP_058669032.1\|4412150_4413629_-\|succinylglutamate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|181873
NZ_CP022073.1\|WP_012132627.1\|4404248_4404599_-\|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|182472
NZ_CP022073.1\|WP_077956896.1\|4417252_4417813_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP022073.1\|WP_058669031.1\|4417827_4418991_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|183238
NZ_CP022073.1\|WP_012132631.1\|4407285_4408116_+\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP022073.1\|WP_058669037.1\|4401919_4403275_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP022073.1\|WP_058669033.1\|4410810_4412154_-\|N-succinylarginine-dihydrolase	unknown	unknown	gnl\|CDD\|237332
NZ_CP022073.1\|WP_060816196.1\|4416322_4417129_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|236970
NZ_CP022073.1\|WP_058669034.1\|4409849_4410818_-\|succinylglutamate-desuccinylase	unknown	unknown	gnl\|CDD\|235408
NZ_CP022073.1\|WP_012132628.1\|4404649_4406008_-\|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|182363
NZ_CP022073.1\|WP_012132626.1\|4403398_4404241_-\|transcriptional-regulator-ChbR	unknown	unknown	gnl\|CDD\|182362
NZ_CP022073.1\|WP_058669035.1\|4409036_4409525_-\|ATP-independent-periplasmic-protein-refolding-chaperone	unknown	unknown	gnl\|CDD\|182473
NZ_CP022073.1\|WP_058669038.1\|4401148_4401907_-\|chitin-disaccharide-deacetylase	unknown	unknown	gnl\|CDD\|235007
NZ_CP022073.1\|WP_110123804.1\|4406527_4406572_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_012132630.1\|4406715_4407057_-\|osmotically-inducible-lipoprotein-OsmE	gnl\|CDD\|183058	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE.	2.8964e-65
NZ_CP022073.1\|WP_060816195.1\|4414656_4415877_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|183486	PRK12381, PRK12381, bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional.	0
NZ_CP022073.1\|WP_012132622.1\|4400708_4400951_-\|cell-division-activator-CedA	gnl\|CDD\|182246	PRK10113, PRK10113, cell division activator CedA.	1.95789e-49
NZ_CP022073.1\|WP_024130389.1\|4406094_4406415_-\|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIB	gnl\|CDD\|182499	PRK10499, PRK10499, PTS sugar transporter subunit IIB.	6.49975e-66
NZ_CP022073.1\|WP_012132639.1\|4413625_4414660_-\|arginine-N-succinyltransferase	gnl\|CDD\|182474	PRK10456, PRK10456, arginine succinyltransferase; Provisional.	0
NZ_CP022073.1\|WP_012132628.1\|4404649_4406008_-\|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIC	gnl\|CDD\|182363	PRK10297, PRK10297, PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; Provisional.	0
NZ_CP022073.1\|WP_058669032.1\|4412150_4413629_-\|succinylglutamate-semialdehyde-dehydrogenase	gnl\|CDD\|181873	PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed.	0
NZ_CP022073.1\|WP_012132627.1\|4404248_4404599_-\|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIA	gnl\|CDD\|182472	PRK10454, PRK10454, PTS N,N'-diacetylchitobiose transporter subunit IIA.	1.50881e-63
NZ_CP022073.1\|WP_077956896.1\|4417252_4417813_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	4.96297e-26
NZ_CP022073.1\|WP_058669031.1\|4417827_4418991_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|183238	PRK11622, PRK11622, ABC transporter substrate-binding protein.	0
NZ_CP022073.1\|WP_012132631.1\|4407285_4408116_+\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NZ_CP022073.1\|WP_058669037.1\|4401919_4403275_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP022073.1\|WP_058669033.1\|4410810_4412154_-\|N-succinylarginine-dihydrolase	gnl\|CDD\|237332	PRK13281, PRK13281, N-succinylarginine dihydrolase.	0
NZ_CP022073.1\|WP_060816196.1\|4416322_4417129_+\|exodeoxyribonuclease-III	gnl\|CDD\|236970	PRK11756, PRK11756, exonuclease III; Provisional.	0
NZ_CP022073.1\|WP_058669034.1\|4409849_4410818_-\|succinylglutamate-desuccinylase	gnl\|CDD\|235408	PRK05324, PRK05324, succinylglutamate desuccinylase; Provisional.	0
NZ_CP022073.1\|WP_012132633.1\|4408288_4408864_-\|environmental-stress-induced-protein-Ves	gnl\|CDD\|236905	PRK11396, PRK11396, environmental stress-induced protein Ves.	3.7152e-148
NZ_CP022073.1\|WP_012132626.1\|4403398_4404241_-\|transcriptional-regulator-ChbR	gnl\|CDD\|182362	PRK10296, PRK10296, DNA-binding transcriptional regulator ChbR; Provisional.	0
NZ_CP022073.1\|WP_058669035.1\|4409036_4409525_-\|ATP-independent-periplasmic-protein-refolding-chaperone	gnl\|CDD\|182473	PRK10455, PRK10455, periplasmic protein; Reviewed.	6.14282e-89
NZ_CP022073.1\|WP_058669038.1\|4401148_4401907_-\|chitin-disaccharide-deacetylase	gnl\|CDD\|235007	PRK02134, PRK02134, chitin disaccharide deacetylase.	5.95745e-174

>NZ_CP022073.1|WP_012132631.1|4407285_4408116_+|ammonia-dependent-NAD(+)-synthetase
MTLQQEIIRALGAKPHINAEEEIRRSVDFLKAYLKTYPFLKSLVLGISGGQDSTLTGKLCQTAITELREETGNDALQFIAVRLPFGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTNGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEAALGVTYDNIDDYLEGKTLDASIAKIIEGWYIRTEHKRRTPITVFDDFWKRS
>NZ_CP022073.1|WP_012132630.1|4406715_4407057_-|osmotically-inducible-lipoprotein-OsmE
MNKNIAGILSAAAVMTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRSQVEQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQSCAEYDTDPQAPKQ
>NZ_CP022073.1|WP_110123804.1|4406527_4406572_+|hypothetical-protein
MSIRDRTGGWYFFD
>NZ_CP022073.1|WP_024130389.1|4406094_4406415_-|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIB
MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGLSADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN
>NZ_CP022073.1|WP_012132628.1|4404649_4406008_-|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIC
MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIRLPDSVPASVSRSFSALIPGFIILSIMGIIAWALANYGSNFHQIIMDTISTPLASLGSVVGWAYVLFVPLLWFFGIHGSLALTALDSGIMTPWALENIAIYQQFGSVDAALEAGKTFHVWAKPMLDSYIFLGGSGATLGLIIAIFLASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIPFILVQPILAAITLIAYYLGIIPPITNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGVATLIYLPFVVVANKAQNAIEQEESEEEIANALKF
>NZ_CP022073.1|WP_012132627.1|4404248_4404599_-|PTS-N,N'-diacetylchitobiose-transporter-subunit-IIA
MLDLENVAGTPSEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKTMMEQSRMALNEAHLVQTKLIEGDQGEGKMKVSLVLVHAQDHLMTSMLARELVTELIELHEKLEQ
>NZ_CP022073.1|WP_012132626.1|4403398_4404241_-|transcriptional-regulator-ChbR
MMQLQVNAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYYQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYHPLLPFCFVASQVYRVNSAFLTYIETVIASLNFRGNGLDEFVEVVTFYIINRLRHHREEQVIDDIPQWLKATVETMHDKTQFGENALENMVHLSAKSQEYLTRATQRYYSKTPMQIINEIRINFAKKQLEMTNYSVTDIAYEAGYSSPSLFIKTFKKLTSFTPNSYRKKLTEFNQ
>NZ_CP022073.1|WP_058669037.1|4401919_4403275_-|6-phospho-beta-glucosidase
MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEDGKEKLDIIFDLCQRMIDKAGVPLKLYKTLDRREALQGADFVTTQLRVGQLKAREQDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTRFKKFIGVCNIPVGMKMFIHDVLALQDSDDLSIDLFGLNHMVFIKDVLVNGESRFAELLDGVASGQLKASTVKNIFDLPFSEGLIRSLNMLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFDLYKNPELNIKPKELEQRGGAYYSDAACEVINAIYNDKQTEHYVNIPHHGHVDNIPADWAVEMTCTLGRNGATPHPRITHFDEKVLGLIYTIKGFEVAASKAALSGEFNDVLLALNLSPLVHSDRDAETLARELILAHEKWLPNFAECIEKLKGAQH
>NZ_CP022073.1|WP_058669038.1|4401148_4401907_-|chitin-disaccharide-deacetylase
MERLLIVNADDFGLSKGQNYGIVEACRNGVVTSTTALVNGDAIDHAAQLCRDVPKLAVGMHFVLTLGKPLTAMPGLTREGLLGKWIWQMAEEETLPLDEISHELECQYQRFIDLFGREPTHLDSHHHVHMFPQIFPIVAQFAAERGVALRIDRQSVLNADDLPVALRSSQGFSSEFYGDAISEALFLQVLDASADRGEKSLEVMCHPAFIDNIIRQSAYCYPRLTELDVLTSASLKYAIAERGYRLGSFLDV
>NZ_CP022073.1|WP_012132622.1|4400708_4400951_-|cell-division-activator-CedA
MMKPLRQQNRPVISYVPRVEPAPPEHAIKMDAFRDVWILRGKYVAFILMGEAFQRSPAFTVPESAQRWANQVRQENEIAE
>NZ_CP022073.1|WP_012132633.1|4408288_4408864_-|environmental-stress-induced-protein-Ves
MEYFDIRKMPVNLWRNGAGETREICCFPPATRDFHWRASIASIAGNGEFSLFPGVERVITLLEGGEVMLEGVNAFTHTLKRHQPFTFAGDSVVKATLSEGQMSMDLNIMTRRDRCKAKVRVADRTFTTFGSRGGVVFVISGAWQLGDKLLTADQGACWHDGKHTLRLLKPEGQLLFSEITWLPGYTPDTVQ
>NZ_CP022073.1|WP_058669035.1|4409036_4409525_-|ATP-independent-periplasmic-protein-refolding-chaperone
MRKLTALFVASTLALGAANLAHAADTTAAAPADAKPMMHHKGKFGPHHDMMFKDLNLTDAQKQQIRDIMKGQRDQMKRPPLEERRAMHDIIASDSFDKAKAEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAPEGKMPTPPAE
>NZ_CP022073.1|WP_058669034.1|4409849_4410818_-|succinylglutamate-desuccinylase
MDNFLAQTLAGISPDITQGETESFHWRWQMPGVLELTPAVEVDRALVLSAGIHGNETAPVEMLDALLSALFEGKIPLRWRLLVILGNPPALAEGVRYCHSDMNRMFGGRWQIFEESGETLRARELEQLLEDFYSRRKTRIRWHLDLHTAIRGSRHVRFGVLPQRPIPWDEHFLSWLGAAGLEALVFHQTPGGTFTHFSCEHFGALSCTLELGKALPFGHNDLTQFTPTAQALATLLAGEKPMEGGTRPIRYRVVAQITRRSDAFVLYMDNQTLNFTPFKEGTLLAQDGDERVIVTHDVEYVLFPNPNVACGLRAGLMLEKLA
>NZ_CP022073.1|WP_058669033.1|4410810_4412154_-|N-succinylarginine-dihydrolase
MKAHEVNFDGLVGLTHHYAGLSFGNEASIQHRFQVSNPRLAAKQGLLKMKALADAGFPQAVIPPHERPFIPVLRQLGFSGQDEQVLEKVARQAPHWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPTTASLLRAIFRDAQFFAVHDALPQVALLGDEGAANHNRLGGDYGAPGIQLFVYGREEGVDTRPVRYPARQTREASEAVARLNQVNPHQVIFARQNPDVIDLGVFHNDVIAVSNRQVLFCHEQAFAKQGELMRQLRSRVAGFMPLEVPAREVSVQDAVATYLFNSQLLSRDDGSMALVLPQECREHAGVWRYLNALLAADNPISDLRVFDLRESMANGGGPACLRLRVVLTEDELRAVNPAVMMNDTLFSTLNDWVDRYYRDRLTAADLADPQLLREGREALDALTQLLNLGSVYLFQQEGAGNG
>NZ_CP022073.1|WP_058669032.1|4412150_4413629_-|succinylglutamate-semialdehyde-dehydrogenase
MTLWINGDWVTGQGERRVKTNPVNGEVLWQGSDADATQVAEAGRAARAAFPAWARLPFAARQAIVEKFAALLEVHKAELTAIIARETGKPRWEAATEVTAMINKIAISVKAYHARTGEQQSELPDGAATLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTLIFKPSELTPWTGEAVMKLWQQAGVPPGVLNLVQGGRETGQALSALDALDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIENPEDIDAAVHLTIQSAFVTAGQRCTCARRLLVKRGEQGDAFLARLLEVSQRLTPGEWDDEPQPFIGGLISEPAARHVYEAWQRLEAMGGRTLLAPRMLKAGTSLLTPGIIEMTGVKQVPDDEVFGPLLSVWRYERFDEAIRMANNTRFGLSCGLVSPDRKQFDQLLLEARAGIVNWNKPLTGAASTAPFGGVGASGNHRPSAWYAADYCAWPMASLESPTLVLPDSLSPGLDFSREEPV
>NZ_CP022073.1|WP_012132639.1|4413625_4414660_-|arginine-N-succinyltransferase
MMVIRPVERRDVSALMQLASKTGGGLTSLPADEATLTSRIERALKTWRGELPKSEQGYVFVLEDSDTGSVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNEKVVAEMRGVIDEHGYSPFWESLGERFFSMEFSRADYLCGTGQKAFIAELMPKHPIYTHFLSEEAQAVIGEVHPQTAPARTVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLLDVVEGQPAPGEFPACLVANENYHHFRAMLIRTDPDTQRLVLTAAQLDALKCHAGDRVRLVRLCAEEKTA
>NZ_CP022073.1|WP_060816195.1|4414656_4415877_-|aspartate-aminotransferase-family-protein
MSLSITRENFDEWMMPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKMLIDATFAERVFFCNSGAEANEAALKLARKYAHDRFGTHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAVYNDLNVASELIDDTTCAVIVEPMQGEGGVLPATKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPIGALLATEKCACVMTVGTHGTTYGGNPLASAVAGKLLEIVNTPEMLNGVKQRHDWFVERLNAINERFGLFSEIRGLGLLIGCVLEAEFAGKAKLISQEAAKAGVMVLIAGANVVRFAPALNVSKEEVATGLDRFALACERIKAGGSS
>NZ_CP022073.1|WP_060816196.1|4416322_4417129_+|exodeoxyribonuclease-III
MKFVSFNINGLRARPHQLSAIVDKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQKGHYGVALLTKETPVSVRRGFPDDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHPLKFPAKAQFYQNLQNYLDNELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLISWGLVDTFRHAHPETVDKFSWFDYRSKGFDDNRGLRIDLLLASNPLAEHCVETGIDYEIRSMEKPSDHAPVWAKFRV
>NZ_CP022073.1|WP_077956896.1|4417252_4417813_+|TVP38/TMEM64-family-protein
MLAAWQQQSPFLSAGLYFLVYTLVAALSIPGAALLTLLGGALFGLWQGTLLVSFASTLGATLAMLASRYLLREWISRRFARQMQTVNHGMARDGAFYLFALRVMPLFPFVLVNLLAGLTSIRVRQYWWISQAGMFPATVIYLNAGRQLSQLTSIRDIISPGMLAAFALLGLLPLASRWLVKRFLRS
>NZ_CP022073.1|WP_058669031.1|4417827_4418991_+|ABC-transporter-substrate-binding-protein
MRRTLLLAGLLLTGHVQAVENWQAVKDEDKGQTVWFNAWGGDNAVNQYLDWVSGEMKTHYAINLRIVRLADAADAVKRIQTESAAGRKTDGSVDLLWVNGENFRTLKEAGLLQTHWAETLPNWRYVDTRKPVREDFSMPTQGAESPWGGAQLTFIANRDITPQPPQSPQALLAFAKAHPGTVTYPRPPDFTGTAFLEQLLLALTPQTDALKVAPDDATFDSVTAPLWAYLDALHPSLWRKGKDFPPSPARMDALLQAGSLRLSLTFNPAHAQQKIASGELPKTSYSFGFSQGMIGNVHFVTIPANARASAGAKVVANFLLSPDAQLRKADPAFWGDPSVLDPHKLPAGQREALRSRIPDGLPPTLAEPHSAWVNALEQAWLRRYGTQ

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Crispr_ID: NZ_CP022073_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_17

4487560-4487651

Unclear

Consensus_repeat	Method
CGCCTTATCCGGCCTACGGAAAGCATA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP022073_17

>merge|NZ_CP022073|17|4487560-4487651|CRISPRCasFinder
CGCCTTATCCGGCCTACGGAAAGCATATCCTGTAGGCCCGGTAAGCGCAGCGCCACCGGGCACATCGCCTTATCCGGCCTACGGGAAGCATA

>NZ_CP022073|17|17|4487560-4487651|CRISPRCasFinder
CGCCTTATCCGGCCTACGGAAAGCATA	TCCTGTAGGCCCGGTAAGCGCAGCGCCACCGGGCACAT
CGCCTTATCCGGCCTACGGGAAGCATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058669012.1\|4478537_4479449_-\|N-acetylglucosamine-kinase	unknown	unknown	gnl\|CDD\|183967
NZ_CP022073.1\|WP_058669008.1\|4495461_4495836_-\|YcfL-family-protein	unknown	unknown	gnl\|CDD\|227920
NZ_CP022073.1\|WP_012132793.1\|4475749_4476529_+\|spermidine/putrescine-ABC-transporter-permease-PotC	unknown	unknown	gnl\|CDD\|236542
NZ_CP022073.1\|WP_012132815.1\|4494806_4495448_-\|penicillin-binding-protein-activator-LpoB	unknown	unknown	gnl\|CDD\|225951
NZ_CP022073.1\|WP_012132798.1\|4480725_4481427_-\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|183244
NZ_CP022073.1\|WP_047457498.1\|4488865_4489123_-\|DUF1471-domain-containing-protein	unknown	unknown	gnl\|CDD\|369322
NZ_CP022073.1\|WP_049011765.1\|4474895_4475753_+\|spermidine/putrescine-ABC-transporter-permease-PotB	unknown	unknown	gnl\|CDD\|181910
NZ_CP022073.1\|WP_024130434.1\|4490847_4492152_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP022073.1\|WP_058669010.1\|4484083_4487530_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182649
NZ_CP022073.1\|WP_012132812.1\|4492399_4492942_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|179896
NZ_CP022073.1\|WP_024130433.1\|4490072_4490612_-\|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|183072
NZ_CP022073.1\|WP_058669014.1\|4476553_4477600_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein-PotD	unknown	unknown	gnl\|CDD\|181913
NZ_CP022073.1\|WP_060816199.1\|4492965_4493991_-\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|235417
NZ_CP022073.1\|WP_058669011.1\|4479481_4480726_-\|lipoprotein-releasing-ABC-transporter-permease-subunit-LolE	unknown	unknown	gnl\|CDD\|236860
NZ_CP022073.1\|WP_058669013.1\|4477700_4478522_-\|NAD-dependent-protein-deacylase	unknown	unknown	gnl\|CDD\|234777
NZ_CP022073.1\|WP_024130432.1\|4489363_4489999_+\|TetR-family-copper-responsive-transcriptional-repressor-ComR	unknown	unknown	gnl\|CDD\|224228
NZ_CP022073.1\|WP_024130431.1\|4487820_4488786_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|182294
NZ_CP022073.1\|WP_065422812.1\|4481419_4482727_-\|lipoprotein-releasing-ABC-transporter-permease-subunit-LolC	unknown	unknown	gnl\|CDD\|182753
NZ_CP022073.1\|WP_012132800.1\|4482880_4483954_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|227104
NZ_CP022073.1\|WP_058669009.1\|4494001_4494826_-\|thiamine-kinase	unknown	unknown	gnl\|CDD\|182349

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058669012.1\|4478537_4479449_-\|N-acetylglucosamine-kinase	gnl\|CDD\|183967	PRK13310, PRK13310, N-acetyl-D-glucosamine kinase; Provisional.	0
NZ_CP022073.1\|WP_058669008.1\|4495461_4495836_-\|YcfL-family-protein	gnl\|CDD\|227920	COG5633, COG5633, Predicted periplasmic lipoprotein [General function prediction only].	7.11833e-60
NZ_CP022073.1\|WP_012132793.1\|4475749_4476529_+\|spermidine/putrescine-ABC-transporter-permease-PotC	gnl\|CDD\|236542	PRK09500, potC, spermidine/putrescine ABC transporter membrane protein; Reviewed.	3.42942e-163
NZ_CP022073.1\|WP_012132815.1\|4494806_4495448_-\|penicillin-binding-protein-activator-LpoB	gnl\|CDD\|225951	COG3417, FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) [General function prediction only].	9.7462e-82
NZ_CP022073.1\|WP_012132798.1\|4480725_4481427_-\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	gnl\|CDD\|183244	PRK11629, lolD, lipoprotein-releasing ABC transporter ATP-binding protein LolD.	2.1553e-165
NZ_CP022073.1\|WP_047457498.1\|4488865_4489123_-\|DUF1471-domain-containing-protein	gnl\|CDD\|369322	pfam07338, DUF1471, Protein of unknown function (DUF1471). This family consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some members of this family are annotated as ydgH precursors and contain two copies of this region, one at the N-terminus and the other at the C-terminus. The function of this family is unknown.	2.77519e-15
NZ_CP022073.1\|WP_049011765.1\|4474895_4475753_+\|spermidine/putrescine-ABC-transporter-permease-PotB	gnl\|CDD\|181910	PRK09497, potB, spermidine/putrescine ABC transporter membrane protein; Reviewed.	1.64482e-177
NZ_CP022073.1\|WP_024130434.1\|4490847_4492152_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	1.03107e-169
NZ_CP022073.1\|WP_058669010.1\|4484083_4487530_+\|transcription-repair-coupling-factor	gnl\|CDD\|182649	PRK10689, PRK10689, transcription-repair coupling factor; Provisional.	0
NZ_CP022073.1\|WP_012132812.1\|4492399_4492942_-\|alpha/beta-hydrolase	gnl\|CDD\|179896	PRK04940, PRK04940, hypothetical protein; Provisional.	5.74975e-145
NZ_CP022073.1\|WP_024130433.1\|4490072_4490612_-\|glycine-zipper-2TM-domain-containing-protein	gnl\|CDD\|183072	PRK11280, PRK11280, hypothetical protein; Provisional.	1.81572e-109
NZ_CP022073.1\|WP_058669014.1\|4476553_4477600_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein-PotD	gnl\|CDD\|181913	PRK09501, potD, spermidine/putrescine ABC transporter periplasmic substrate-binding protein; Reviewed.	0
NZ_CP022073.1\|WP_060816199.1\|4492965_4493991_-\|beta-N-acetylhexosaminidase	gnl\|CDD\|235417	PRK05337, PRK05337, beta-hexosaminidase; Provisional.	0
NZ_CP022073.1\|WP_058669011.1\|4479481_4480726_-\|lipoprotein-releasing-ABC-transporter-permease-subunit-LolE	gnl\|CDD\|236860	PRK11146, PRK11146, lipoprotein-releasing ABC transporter permease subunit LolE.	0
NZ_CP022073.1\|WP_058669013.1\|4477700_4478522_-\|NAD-dependent-protein-deacylase	gnl\|CDD\|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	8.98413e-132
NZ_CP022073.1\|WP_024130432.1\|4489363_4489999_+\|TetR-family-copper-responsive-transcriptional-repressor-ComR	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.91102e-14
NZ_CP022073.1\|WP_024130431.1\|4487820_4488786_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|182294	PRK10190, PRK10190, L,D-transpeptidase; Provisional.	1.37005e-101
NZ_CP022073.1\|WP_065422812.1\|4481419_4482727_-\|lipoprotein-releasing-ABC-transporter-permease-subunit-LolC	gnl\|CDD\|182753	PRK10814, PRK10814, lipoprotein-releasing ABC transporter permease subunit LolC.	0
NZ_CP022073.1\|WP_012132800.1\|4482880_4483954_+\|acyltransferase-family-protein	gnl\|CDD\|227104	COG4763, COG4763, Predicted membrane protein [Function unknown].	3.03773e-118
NZ_CP022073.1\|WP_058669009.1\|4494001_4494826_-\|thiamine-kinase	gnl\|CDD\|182349	PRK10271, thiK, thiamine kinase; Provisional.	3.81554e-124

>NZ_CP022073.1|WP_058669010.1|4484083_4487530_+|transcription-repair-coupling-factor
MPEQQRYTLPTKPGDQRQLGELTGAACATLVAEIAERHAGPIVLIAPDMQNALRLHDEVRQFTDQLVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPSMQRGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVDAINLLPAHEFPTDKTAIELFRSQWRDTFEVKRDAEHIYQQVSKGTLPAGIEYWQPLFFNEPLPPLFSYFPANTLLVNTGALENSAERFQADTLARFENRGVDPMRPLLPPESLWLRVDELFSELKRWPRVQLKTEHLPGKAANTNLGFQKLPDLAVQAQQKAPLDALRRFLESFNGPVIFSVESEGRREALGELLARIKISPKRILRLDEALDAGRYLMIGAAEHGFIDTQRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHPGQPVVHLEHGVGRYAGMTTLEAGGIKGEYLMLTYANDARLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQVAEGKIDILIGTHKLLQSDVKLKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDNLVVREAILREVLRGGQVYYLYNDVENIQKAADRLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEELKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAEKNHVNPTWLIGLLQKQPQHFRLDGPTRLKFIQDLAERKTRMDWVRQFMAQLEENAAA
>NZ_CP022073.1|WP_012132800.1|4482880_4483954_+|acyltransferase-family-protein
MKQKELWINQIKGLCICLVVIYHSVITFYPHLTAFQYPLSEILTKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGTCIDKRIWSIVWVLALWGVAQWLALSWLNHWLAPERDINNASNAAYAGSVGEFIHGMLTASTSLWYLYALVVYFVLCKVFSQWAKPLFVLFVLLSVTINFVPTPWWGMNSVIRNLPYYSLGAWFGATLMEWIKHVPLRRYAIAFAGIALLAVIAWLANVSLLLSLVSIVLIMKLFYQYEQRFGMRSSSLLNVIGSNTIAIYTTHRILVEAFSLTLIPKINGAAWSPQLEFALLLVYPFASLLICTLTGLTVRKISQRLFADLFFSPPSLPAVTSYSR
>NZ_CP022073.1|WP_065422812.1|4481419_4482727_-|lipoprotein-releasing-ABC-transporter-permease-subunit-LolC
MILFRITLTNTYGSVIYPFRFRLYTRGFANSNQTDFMYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEQGSLNPQQIPEKAVTLNGVNRIAPLTTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTSLEPGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMGRLPSQRLFTVIGTFAANSEVDGYQMLTNIQDASRLMRYPAGNITGWRLWLNEPLKVDTLSQQTLPEGTKWQDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGALLGAVLGALLASQLNNLMPIIGAFLDGAALPVAIEPLQVVVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
>NZ_CP022073.1|WP_012132798.1|4480725_4481427_-|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD
MNKILLQCDNLCKRYQEGSVQTDVLHDVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFSGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEITERAREMLQAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRAQGTAFLVVTHDLQLAKRMSRQLEMRDGLLTAELSLMGAE
>NZ_CP022073.1|WP_058669011.1|4479481_4480726_-|lipoprotein-releasing-ABC-transporter-permease-subunit-LolE
MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVNQPWTHWREALEKVQHVQGIAAAAPYINFTGLVESGANLRAIQVKGVDPEQEQRLSALPSFVQNHAWDNFRAGEQQIIIGKGVADALKVKQGDWVSIMIPNASADHKLQQPKRVRLHVTGILQLSGQLDHSFAMIPMEDAQQYLDMGASVSGIAIKVNDVFNANKLVRDAGEVTDSYVYIKSWIGTYGYMYHDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLLGSLCGVAIGVVVSLQLTPIIEGIEKLIGHQFLSGDIYFIDFLPSELHWLDVIYVLVTALLLSLLASWYPARRASNIDPARVLSGQ
>NZ_CP022073.1|WP_058669012.1|4478537_4479449_-|N-acetylglucosamine-kinase
MHYGFDIGGTKIALGVFDNERRLRWEKRVPTPREGYEAFLTAVCDLVAEADQQFDVKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGRSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQLGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALWEQGDERARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFTAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAAFLHLTD
>NZ_CP022073.1|WP_058669013.1|4477700_4478522_-|NAD-dependent-protein-deacylase
MQSRRAHRLSRFRKNKRHLRERLRQRIFFRDRVVPEMMEKPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFARDPELVQSFYNARRQQLQRPEIQPNPAHVALAKLEEALGDRFLLVTQNIDNLHERAGNKNIIHMHGELLKVRCSQSGQILDWTGDVTSDDKCHCCQFPASLRPHVVWFGEMPLGMDEIYMALAMADVFIAIGTSGHVYPAAGFVHEARLHGAHTVELNLEPSQVGSEFEEKYYGPASLVVPAFIEKLLKGL
>NZ_CP022073.1|WP_058669014.1|4476553_4477600_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein-PotD
MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKTKLTNFHNLDPEMLNKPFDPNNDYSIPYIWGATAIGVNSDEIDPKTVTSWADLWKPEYKSSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAYVARQAGTPLEVIWPKEGGIFWMDSLSIPANAKNKEGALKLINFLLRPDVAKEVAETIGYPTPNLAARKLLSPEVANDKSLYPDADTINKGEWQNDVGSASAIYEGYYQKLKAGR
>NZ_CP022073.1|WP_012132793.1|4475749_4476529_+|spermidine/putrescine-ABC-transporter-permease-PotC
MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTNWYSLLMNNDSLLQAAQHSLTMAVFSATFATIIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVTGPGYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGR
>NZ_CP022073.1|WP_049011765.1|4474895_4475753_+|spermidine/putrescine-ABC-transporter-permease-PotB
MKNTSKFQNVVIVTVVGWLVLFVFLPNLMIIGTSFLTRDDANFVKMVFTLDNYARLLDPLYFEVLLHSLNMALIATFACLVLGYPFAWFLAKLPEKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDAPIRIMFTPGAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE
>NZ_CP022073.1|WP_024130431.1|4487820_4488786_+|L,D-transpeptidase-family-protein
MMNNMRLSRWLAFFTLAASVALAIPAQANTWPLPPPGSKLVGENTFHVVENNGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIDLPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNIINTPIKASVEPGGMRLVEVHQPLSKNIDDDPQILPIVLNGQMQAFKDAAQTDAAVMEHVMEVRSGMPVDVTRHPGITQQSM
>NZ_CP022073.1|WP_047457498.1|4488865_4489123_-|DUF1471-domain-containing-protein
MKNVKTLIAAAVLSSLSFASFAAVEVQATPVDQQKVGTISATAGTNLGSLEDQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK
>NZ_CP022073.1|WP_024130432.1|4489363_4489999_+|TetR-family-copper-responsive-transcriptional-repressor-ComR
MTTDSTGCVKKSRGRPKVFDREAALDKAMTLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYISRFAAKHEAQLFCEEKSVESALEDYFTAVATCFTSKDTPAGCFMINTSATLAASSREIAHTVKSRHAMQEQTLTQFLRQRQERGEIPAHCNPQTLAEYLNCILQGMSISAREGATFDKLMQITRTTLRLWPEMLKA
>NZ_CP022073.1|WP_024130433.1|4490072_4490612_-|glycine-zipper-2TM-domain-containing-protein
MNKSMLAGIGIGVAAALGVAAVASLNVFDRSPKYAQVVSATPIKETVKTPRQECRNVTVTHRKPVQDENRIAGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSMQENDTYTSTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDKDPGTQIPLDNNGQLILNNDA
>NZ_CP022073.1|WP_024130434.1|4490847_4492152_-|NAD(P)/FAD-dependent-oxidoreductase
MTTPLKKIVIVGGGAGGLEMATQLGKKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVMDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKEHCIFLDNPHQARRFHQEMLNLFLKYSSSMGVSGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEHIKADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDVYAIGDCASCARPEGGFVPPRAQAAHQMASCALNNILAQMKGKPMKDYVYKDHGSLVSLSNFSTVGSLMGNLMRGSMMVEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH
>NZ_CP022073.1|WP_012132812.1|4492399_4492942_-|alpha/beta-hydrolase
MIIYLHGFDSNSPGNHEKVLQLQFIDSDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDDRPLICGVGLGGYWAERIGFLCDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALDSHRSAKELHHFYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
>NZ_CP022073.1|WP_060816199.1|4492965_4493991_-|beta-N-acetylhexosaminidase
MGPVMLDVEGFELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALHGLEEGGKLAQDAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPLKALAMATRFIDGMHAAGMKTTGKHFPGHGAVTADSHKETPIDPRPEAEIRARDMSVFRSLITGNKLDAIMPAHVIYSDVDPRPASGSPHWLKTVLREELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPINAERVTRLYHKGSFSRQELMDSARWKTVSAQLNQLHERWQEEKAGH
>NZ_CP022073.1|WP_058669009.1|4494001_4494826_-|thiamine-kinase
MQSSNNNLLTRDDVLSRYFPQYHPVAACHNGLSGGSCIIEHDARRLVLRCHHDPFAPESDFLRQYHALSRLPETLAPRPRFYIPGWMAVDYLQGEVKSGLPDTDELAGLLYHLHQQPRFGWRISLLPLLMRYWQGSDPARRTPYWLRMLKRLRAAREPRPLRLAPLHMDVHGDNLVQTASGLRLIDWEYAGDGDIALELAAVWVEDERQHQRLVRSYAAVAHICPQTLWRQVRLWRPWVMMLKAGWFEYRWQQTGEQQFIRLADDAWRQLKKKG
>NZ_CP022073.1|WP_012132815.1|4494806_4495448_-|penicillin-binding-protein-activator-LpoB
MMKMNRYALVAALAIFLSGCVGQREPAPVDEVKPAPEQPAEPQQPVPVVPSVPTIPQQPGPIEHEDQTAQPAPRVRHYDWNSAMQPMVGKMLQADGVTAGNVLLVDSVNNRTNGSLNAGEATETLRNALANNGKFTLVSAQQLAMAKQQLGLSPQDSLGTRSKAIGIARNVGAQYVLYSSAAGNVNAPSLQMQLMLVQTGEIIWSGKGAVQQQ
>NZ_CP022073.1|WP_058669008.1|4495461_4495836_-|YcfL-family-protein
MTRGCLAMSLALLLLAGCRSHPEIPVSDEQTLVMESTLLAAGITAEAPALTTSDIQPSASSRLYNERQEPVTVHYRFYWYDARGLEMHPLEAPRSVTIPARSSVTLYGSANYLGAHKVRLYLYL

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Crispr_ID: NZ_CP022073_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_18

4672180-4672320

Orphan

Consensus_repeat	Method
TGCCGGATGGCGACGCAAAGCGTCTTATCCGGCCTACGGAGTCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022073_18

>merge|NZ_CP022073|18|4672180-4672320|CRISPRCasFinder
TGCCGGATGGCGACGCAAAGCGTCTTATCCGGCCTACGGAGTCACAGGTACATATCTGTAGGCCTAATAAGCGTAGCGCCATCAGGCGCTGCTTTATGCCGGATGGCGACGCGAAGCGTCTTATCCGGCCTACGGAGTCAC

>NZ_CP022073|18|18|4672180-4672320|CRISPRCasFinder
TGCCGGATGGCGACGCAAAGCGTCTTATCCGGCCTACGGAGTCAC	AGGTACATATCTGTAGGCCTAATAAGCGTAGCGCCATCAGGCGCTGCTTTA
TGCCGGATGGCGACGCGAAGCGTCTTATCCGGCCTACGGAGTCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_049009005.1\|4662900_4663680_+\|envelope-biogenesis-factor-ElyC	unknown	unknown	gnl\|CDD\|236702
NZ_CP022073.1\|WP_012133019.1\|4675562_4676846_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
NZ_CP022073.1\|WP_012133018.1\|4674697_4675381_-\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP022073.1\|WP_012133012.1\|4667931_4669680_-\|lipid-A-ABC-transporter-ATP-binding-protein/permease-MsbA	unknown	unknown	gnl\|CDD\|183016
NZ_CP022073.1\|WP_012133008.1\|4664704_4665451_-\|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|235473
NZ_CP022073.1\|WP_000167332.1\|4672471_4672756_-\|integration-host-factor-subunit-beta	unknown	unknown	gnl\|CDD\|178925
NZ_CP022073.1\|WP_012133020.1\|4676916_4678005_-\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
NZ_CP022073.1\|WP_012133006.1\|4663656_4664550_-\|YcbJ-family-phosphotransferase	unknown	unknown	gnl\|CDD\|182575
NZ_CP022073.1\|WP_058668964.1\|4666957_4667935_-\|tetraacyldisaccharide-4'-kinase	unknown	unknown	gnl\|CDD\|234808
NZ_CP022073.1\|WP_058668965.1\|4665681_4666914_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225755
NZ_CP022073.1\|WP_012133023.1\|4681492_4683775_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_CP022073.1\|WP_058668967.1\|4660659_4661982_-\|chromosome-partition-protein-MukF	unknown	unknown	gnl\|CDD\|179980
NZ_CP022073.1\|WP_058669164.1\|4678414_4680175_+\|30S-ribosomal-protein-S12-methylthiotransferase-accessory-factor-YcaO	unknown	unknown	gnl\|CDD\|132588
NZ_CP022073.1\|WP_024130479.1\|4683966_4684707_+\|pyruvate-formate-lyase-1-activating-protein	unknown	unknown	gnl\|CDD\|182994
NZ_CP022073.1\|WP_012133009.1\|4665447_4665630_-\|protein-YcaR	unknown	unknown	gnl\|CDD\|183328
NZ_CP022073.1\|WP_012133016.1\|4672910_4674584_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775
NZ_CP022073.1\|WP_060816120.1\|4669716_4671981_-\|ComEC-family-protein	unknown	unknown	gnl\|CDD\|236924
NZ_CP022073.1\|WP_024130478.1\|4680580_4681441_+\|formate-transporter-FocA	unknown	unknown	gnl\|CDD\|182746
NZ_CP022073.1\|WP_058668966.1\|4661985_4662765_-\|tRNA-uridine-5-oxyacetic-acid(34)-methyltransferase-CmoM	unknown	unknown	gnl\|CDD\|182918
NZ_CP022073.1\|WP_058668963.1\|4684801_4685650_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_049009005.1\|4662900_4663680_+\|envelope-biogenesis-factor-ElyC	gnl\|CDD\|236702	PRK10494, PRK10494, envelope biogenesis factor ElyC.	0
NZ_CP022073.1\|WP_012133019.1\|4675562_4676846_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NZ_CP022073.1\|WP_012133018.1\|4674697_4675381_-\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	2.37842e-133
NZ_CP022073.1\|WP_012133012.1\|4667931_4669680_-\|lipid-A-ABC-transporter-ATP-binding-protein/permease-MsbA	gnl\|CDD\|183016	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA.	0
NZ_CP022073.1\|WP_012133008.1\|4664704_4665451_-\|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl\|CDD\|235473	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.	5.2548e-157
NZ_CP022073.1\|WP_000167332.1\|4672471_4672756_-\|integration-host-factor-subunit-beta	gnl\|CDD\|178925	PRK00199, ihfB, integration host factor subunit beta; Reviewed.	1.76901e-65
NZ_CP022073.1\|WP_012133020.1\|4676916_4678005_-\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_CP022073.1\|WP_012133006.1\|4663656_4664550_-\|YcbJ-family-phosphotransferase	gnl\|CDD\|182575	PRK10593, PRK10593, hypothetical protein; Provisional.	0
NZ_CP022073.1\|WP_058668964.1\|4666957_4667935_-\|tetraacyldisaccharide-4'-kinase	gnl\|CDD\|234808	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed.	0
NZ_CP022073.1\|WP_058668965.1\|4665681_4666914_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|225755	COG3214, COG3214, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP022073.1\|WP_012133023.1\|4681492_4683775_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP022073.1\|WP_058668967.1\|4660659_4661982_-\|chromosome-partition-protein-MukF	gnl\|CDD\|179980	PRK05260, PRK05260, chromosome partition protein MukF.	0
NZ_CP022073.1\|WP_058669164.1\|4678414_4680175_+\|30S-ribosomal-protein-S12-methylthiotransferase-accessory-factor-YcaO	gnl\|CDD\|132588	TIGR03549, TIGR03549, YcaO domain protein. This family consists of remarkably well-conserved proteins from gamma and beta Proteobacteria, heavily skewed towards organisms of marine environments. Its gene neighborhood is not conserved. This family has an OsmC-like N-terminal domain. It shares a YcaO domain, frequently associated with ATP-dependent cyclodehydration for peptide modification. The function is unknown. Fifteen of the first sixteen members of this family are from selenouridine-positive genomes, but this correlation may not be meaningful.	0
NZ_CP022073.1\|WP_024130479.1\|4683966_4684707_+\|pyruvate-formate-lyase-1-activating-protein	gnl\|CDD\|182994	PRK11145, pflA, pyruvate formate lyase 1-activating protein.	0
NZ_CP022073.1\|WP_012133009.1\|4665447_4665630_-\|protein-YcaR	gnl\|CDD\|183328	PRK11827, PRK11827, protein YcaR.	4.66652e-37
NZ_CP022073.1\|WP_012133016.1\|4672910_4674584_-\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_CP022073.1\|WP_060816120.1\|4669716_4671981_-\|ComEC-family-protein	gnl\|CDD\|236924	PRK11539, PRK11539, ComEC family competence protein; Provisional.	0
NZ_CP022073.1\|WP_024130478.1\|4680580_4681441_+\|formate-transporter-FocA	gnl\|CDD\|182746	PRK10805, PRK10805, formate transporter; Provisional.	0
NZ_CP022073.1\|WP_058668966.1\|4661985_4662765_-\|tRNA-uridine-5-oxyacetic-acid(34)-methyltransferase-CmoM	gnl\|CDD\|182918	PRK11036, PRK11036, tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM.	0
NZ_CP022073.1\|WP_058668963.1\|4684801_4685650_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.51457e-35

>NZ_CP022073.1|WP_060816120.1|4669716_4671981_-|ComEC-family-protein
MKITTVSVCVLCGILPLIFLPVLPGSLCLIGIFCFACALSFVPYKYTQYASLTLLFFLWGILAAKQAVWPGNILPGATQETVVQITATDHATTHYGQITHVQGKRLFPSVGVVLYGQYLPGEVCAGQRWAMKLKVRAVHGQLNEGGFDSQRYALAQHQPLSGRFLHATVIESSCSLRARYLASLNTTLAHYPWQQVILALGMGERLSVSQEVKNIMRDTGTAHLMAISGLHIAFAALLAGGLIRGAQFLLPTRWIHWQTPLVGGIVCATFYAWLTGLQPPALRTVVALAAWGLLKLSGRQWSGWEVWFCCLAAIVITDPIAVLSQSLWLSAFAVAALIFWYQWFPVPAWALPRAGKVVLDLVHLQLGITLLLLPVQIALFHGVSVTSFPANLFAVPLVTFISVPLILAGMIGHLTGPLMAEEGLWALADASLDVLFRALKSLPEGWINIDYRWQYLSLAPWLTLMAWRLNAWRTYPVICLSGVLLLSWPFWRTPRTEAWQVHMLDVGQGLAMVIAHNGKAILYDTGRAWPDGDSAQQLIIPWLRWHNLEPEGIILSHEHLDHRGGLSSLQKTWPSLWIRSPLGWKGHLPCFRAEQWTWQGLSFIAHWPIKGNREKGNNHSCVVKVDDGKQSILLTGDIESPAEQKMLSRYWRHLQATIIQVPHHGSNTSSSLALIQRVEGLAALASASRYNAWRLPSWKVKQRYQQQGYQWLDTPHQGQISVDFSPQGWRIRGLREQILPRWYHQWFGVSEDNG
>NZ_CP022073.1|WP_012133012.1|4667931_4669680_-|lipid-A-ABC-transporter-ATP-binding-protein/permease-MsbA
MHNDKDLSTWQTFRRLWPTIAPFKTGLIVAGVALILNAASDAFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIALFIMMFYNSWQLSIILVILAPVVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIERSTGDLEFRNVTFTYPGRETPALRNINLHIPAGKTVALVGRSGSGKSTIASLITRFYDINEGNILMDGHDLREYTLSSLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFISKMDDGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHRELLEQRGVYSQLHKMQFGQ
>NZ_CP022073.1|WP_058668964.1|4666957_4667935_-|tetraacyldisaccharide-4'-kinase
MIARIWSGESPLWRLLLPLSWLYGLVSGGIRLCYRLGIKRAWRAPVPVVVVGNLTAGGNGKTPVVIWLVEQLQQRGIRVGVVSRGYGGKAASYPLLLTPQTSSAEAGDEPVLIYQRTGAPVAVSPVRSDAVKAILARHDVQIIVTDDGLQHYRLARDIEIVVIDGVRRFGNGWWLPAGPMRERASRLKSVDAVIVNGGVARPGEIPMQLAPGLAVNLCTGERRHVAELSNIVAMAGIGHPPRFFATLEACGASLQKCVPLADHQSLAFNDVKALVTDGQTLVMTEKDAVKCRGFAEDNWWYLPVDARLSGEQPDALLEQLISLAS
>NZ_CP022073.1|WP_058668965.1|4665681_4666914_-|winged-helix-turn-helix-domain-containing-protein
MSLPHLSLTDVRHLHLAAQGLLKKPRRQALPADILATISRMSLLQIDTINVVARSPYLVLFSRLGHYPQQWLDDSLSRGELMEYWAHEACFLPRSDFTLIRHRMLAPEKMGWKYKASWMQEHADEIAQLIQHIHHNGPVRSADFAHPRKGASGWWEWKPHKRHLEGLFTAGKVMVVERRNFQRVYDLTQRVMPHWDDKRDLLSQAEAEIAMLDNSARSLGIFREQWLADYYRLRRPEVKTWRDIRVEQGQLVPVQADRLGAMWLHADLLPLLEQALNNKLIATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRKTGVLEVISLWLQEGVKPGPTLQKGLLQAINAFARWQQASRVTLGNCPSGLFAENRHGWEIDAVS
>NZ_CP022073.1|WP_012133009.1|4665447_4665630_-|protein-YcaR
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARSITADESKS
>NZ_CP022073.1|WP_012133008.1|4664704_4665451_-|3-deoxy-manno-octulosonate-cytidylyltransferase
MSFVVIIPARFSSTRLPGKPLLDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAAPIHGAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTAEDLERVRAEMR
>NZ_CP022073.1|WP_012133006.1|4663656_4664550_-|YcbJ-family-phosphotransferase
MEQLRAELSHLLGEKLSRIECVSEKADTALWSLYDSQGNPMPLMARSFTTPGVAQQLAWKTTMLARSGTVRMPVVYGVMTHEEHPGPDVLLLERLRGVSVEAPARTPERWEQLKDQIVEGLLAWHRQDSRGCVGAVDHTQENIWPSWYRQRVEVLWTTLNQFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFSLRSMLKDARSDQLLAMVGPGVMLWAPREYELFRLMDNALAEGLLWHYLQHAPVAESFIWRRWLYVLWDEVAQLVNTGRFSRSNFDLATKSLLPWLA
>NZ_CP022073.1|WP_049009005.1|4662900_4663680_+|envelope-biogenesis-factor-ElyC
MLFTLKKVTGGLLLPLPFMLLIMGVGLALVWFSRFQKTGKAFISLGWLAIFLLSLQPVADRLLKPIEDSYPTWQGTQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGVRLWLANPGSKLIFTGAAAKTNRVSTAEAGARVAQSLGVPRSDIITLDQPKDTEEEAEAVKQAIGDSPFLLVTSASHLPRAMIFFQNVGLHPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYETLGRIWQWLKGASGEPGQQ
>NZ_CP022073.1|WP_058668966.1|4661985_4662765_-|tRNA-uridine-5-oxyacetic-acid(34)-methyltransferase-CmoM
MRDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRLLAEFGERKLHILDAGGGEGQMAIKMAERGHQVTLCDLSGEMIARAQQAAEAKGVSGNMHFIQCAVQDVASHLETSADLILFHAVLEWVAEPVGVLETLWSVLRPGGALSLMFYNANGLLMHNMVAGNFDYVQVGMPKRKKRTLSPDYPRKPEQVYQWLEDIGWQITGKTGVRVFHDYLREKHQQRDCYEMLVELETRYCRQEPYISLGRYIHVTARKPQMQG
>NZ_CP022073.1|WP_058668967.1|4660659_4661982_-|chromosome-partition-protein-MukF
MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAADEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRIMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDATMAHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQRLRQSIQSYFDEPWALTYANADRLLDMRDEEMALRDEEVTGELPPDLEYEEFNEIREQLAAIIEEQLAIYKSRQAPLDLGLVVREYLAQYPRARHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY
>NZ_CP022073.1|WP_000167332.1|4672471_4672756_-|integration-host-factor-subunit-beta
MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
>NZ_CP022073.1|WP_012133016.1|4672910_4674584_-|30S-ribosomal-protein-S1
MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDIVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKSNPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE
>NZ_CP022073.1|WP_012133018.1|4674697_4675381_-|(d)CMP-kinase
MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVTSEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRDAPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTRLSIEQVIEKALQYARQKLALA
>NZ_CP022073.1|WP_012133019.1|4675562_4676846_-|3-phosphoshikimate-1-carboxyvinyltransferase
MESLTLQPIARVDGTINLPGSKSVSNRALLLAALASGTTVLTNLLDSDDVRHMLNALSALGVSYTLSADRTRCEITGQGGVLHAEGALELFLGNAGTAMRPLAAALCLGANDIVLTGEPRMKERPIGHLVDALRQGGAKIDYLEQENYPPLRLRGGFSGGHVEVDGSVSSQFLTALLMTAPLAPQDTTIAIKGDLVSKPYIDITLNLMKTFGVEVENQNYQRFVVKGEQQYRSPGQYLVEGDASSASYFLAAGAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATITWGDDFIACTRGELNAVDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDFIRITPPAQLQFAEIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISTPA
>NZ_CP022073.1|WP_012133020.1|4676916_4678005_-|3-phosphoserine/phosphohydroxythreonine-transaminase
MAQVFNFSSGPAMLPAEVLKLAQQDLRDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLSIPSNYKVLFCHGGGRGQFAAIPLNILGDKTSADYVDAGYWAASAIKEAKKYCSPNVIDAKVTVDGLRAVKPMSEWQLSDNAAYVHYCPNETIDGIAIDETPNFGSDVVVAADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMNKINQQKAELLYGVIDNSDFYRNDVAKSNRSRMNVPFQLADSALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVDFERRHG
>NZ_CP022073.1|WP_058669164.1|4678414_4680175_+|30S-ribosomal-protein-S12-methylthiotransferase-accessory-factor-YcaO
MTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTDDDALPEGLLDDRLRAFYDPENELAGSMLIDLQSGNEDRGICGLPFTRQSDNHTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERHVKNRIIAESISLPEIPADVLARYPAVVEAIAKLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFADWSFSGTTEEEFATLMAIFNAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGRHLRETLLALPGSAWEKEAYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQALIWTEWTMEFNASIFSAERANYYRCLQTLLLLAQEEDREPLQYLNAFVRMYGAEAVEAASAALSGEAAFYGLQAVDSDLHAFASHQSLLKAYEKLQRAKAAHWSK
>NZ_CP022073.1|WP_024130478.1|4680580_4681441_+|formate-transporter-FocA
MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVICGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNLIGCLLFVLLMWLSGEYMTANGGWGLNVLQTADHKMHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFATPEFWAAVGSSPESFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRGDDHHC
>NZ_CP022073.1|WP_012133023.1|4681492_4683775_+|formate-C-acetyltransferase
MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATNATTALWDSVMEGVKQENRTHAPVDFDTSVASTITSHDAGYINKALEKIVGLQTEAPLKRAIIPFGGIKMVEGSCKAYNRELDPMLKKIFTEYRKTHNQGVFDVYTKDILNCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDFLMKDKYAQFVSLQSDLENGVNLEATIRLREEIAEQHRALGQIKEMAAKYGCDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRVSTFLDAYIERDIKAGKITEQDAQEMIDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGVDGRTLVTKNSFRFLNTLYTMGPSPEPNITVLWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMVVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNFDEVMDRMDHFMDWLAKQYVTALNVIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAVDFEIEGEYPQFGNNDSRVDDMAVDLVERFMKKIQKLTTYRGAIPTQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMEHPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQTM
>NZ_CP022073.1|WP_024130479.1|4683966_4684707_+|pyruvate-formate-lyase-1-activating-protein
MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKESIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYISAKGIKTWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMY
>NZ_CP022073.1|WP_058668963.1|4684801_4685650_-|MurR/RpiR-family-transcriptional-regulator
MSQINTNLLINIRNEAAGLSPILEKVGRFVTENPDFVMRHTITELADSIETSEGSITRFCRAFGFKGFSDFRTALALEQGAARPEEQGNEEISSVMASIRDSHAIINTQELQAAAAWLNQVNNVAIYAVGTAVPVALFLQMNLIKMGKAASFVDRFYLTTSSMMVEPQSQGIIVVHTEQTSADMMQALALAKQHSARILSLTRGTFAPLSRLSDWNLQAAVALKGEGEYGFAEIAGAMMVADKLLNALEEQDERYAECRKAHQKSIFSIESVANKLSEYFMS

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Crispr_ID: NZ_CP022073_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_19

4710477-4710864

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

6 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_CP022073_19

>merge|NZ_CP022073|19|4710477-4710864|CRISPRCasFinder,CRT,PILER-CR
ATACTGAACTGCCTGTGCGGCAGTGAACGCCAGGAACGTGTTGTTGATGGGATTTTGATTTTTCTAAGCTGCCTGTACGGCAGTGAACATGCGGCATTTGCAACGGCGATTGCGATGGTATTTCTAAGCTGCCTGTACGGCAGTGAACCGCTGAATCTCAGCGGCTACCGATATCGTCCTTTTCTAAGCTGCCTGTACGGCAGTGAACTGCAACATCAGCCTGGCGGTATTTTGCTGACTTTTCTAAGCTGCCTGTACGGCAGTGAACAGCAAAAGCCTCTACCATTGTTTTCTCAGACTTTTCTAAGCTGCCTGTACGGCAGTGAACTGGATGTGCTGAGAAATGGCATTGGCGGAGGTTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP022073|19|19|4710477-4710864|CRISPRCasFinder
ATACTGAACTGCCTGTGCGGCAGTGAAC	GCCAGGAACGTGTTGTTGATGGGATTTTGATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGCGGCATTTGCAACGGCGATTGCGATGGTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCTGAATCTCAGCGGCTACCGATATCGTCCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGCAACATCAGCCTGGCGGTATTTTGCTGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGCAAAAGCCTCTACCATTGTTTTCTCAGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGGATGTGCTGAGAAATGGCATTGGCGGAGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP022073|19|1|4710477-4710864|CRT
ATACTGAACTGCCTGTGCGGCAGTGAAC	GCCAGGAACGTGTTGTTGATGGGATTTTGATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGCGGCATTTGCAACGGCGATTGCGATGGTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCTGAATCTCAGCGGCTACCGATATCGTCCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGCAACATCAGCCTGGCGGTATTTTGCTGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGCAAAAGCCTCTACCATTGTTTTCTCAGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGGATGTGCTGAGAAATGGCATTGGCGGAGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP022073|19|1|4710537-4710864|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGCGGCATTTGCAACGGCGATTGCGATGGTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCTGAATCTCAGCGGCTACCGATATCGTCCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGCAACATCAGCCTGGCGGTATTTTGCTGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGCAAAAGCCTCTACCATTGTTTTCTCAGACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGGATGTGCTGAGAAATGGCATTGGCGGAGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058668951.1\|4712029_4712896_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP022073.1\|WP_001040187.1\|4710117_4710336_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP022073.1\|WP_058668950.1\|4714090_4714645_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP022073.1\|WP_081091655.1\|4699413_4703337_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP022073.1\|WP_058668953.1\|4707362_4709084_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP022073.1\|WP_058668946.1\|4717929_4721160_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP022073.1\|WP_024130481.1\|4697325_4698669_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP022073.1\|WP_058668947.1\|4716589_4717912_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP022073.1\|WP_058668955.1\|4704513_4705482_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP022073.1\|WP_000228469.1\|4703471_4703966_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP022073.1\|WP_058668949.1\|4714654_4715656_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP022073.1\|WP_058668948.1\|4715666_4716602_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP022073.1\|WP_049009757.1\|4721156_4722134_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NZ_CP022073.1\|WP_012133041.1\|4709128_4709833_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP022073.1\|WP_058668956.1\|4695941_4697234_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP022073.1\|WP_012133049.1\|4723296_4725573_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP022073.1\|WP_012133047.1\|4712917_4713595_+\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238494
NZ_CP022073.1\|WP_058668952.1\|4711009_4711921_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|184959
NZ_CP022073.1\|WP_024130482.1\|4698679_4699291_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP022073.1\|WP_058668954.1\|4705595_4707362_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058668951.1\|4712029_4712896_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	3.8435e-100
NZ_CP022073.1\|WP_001040187.1\|4710117_4710336_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP022073.1\|WP_058668950.1\|4714090_4714645_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.23753e-93
NZ_CP022073.1\|WP_081091655.1\|4699413_4703337_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP022073.1\|WP_058668953.1\|4707362_4709084_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP022073.1\|WP_058668946.1\|4717929_4721160_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP022073.1\|WP_024130481.1\|4697325_4698669_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP022073.1\|WP_058668947.1\|4716589_4717912_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	8.78787e-174
NZ_CP022073.1\|WP_058668955.1\|4704513_4705482_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP022073.1\|WP_000228469.1\|4703471_4703966_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	1.61477e-117
NZ_CP022073.1\|WP_058668949.1\|4714654_4715656_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP022073.1\|WP_058668948.1\|4715666_4716602_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.07871e-137
NZ_CP022073.1\|WP_049009757.1\|4721156_4722134_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	0
NZ_CP022073.1\|WP_012133041.1\|4709128_4709833_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	2.07702e-140
NZ_CP022073.1\|WP_058668956.1\|4695941_4697234_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP022073.1\|WP_012133049.1\|4723296_4725573_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP022073.1\|WP_012133047.1\|4712917_4713595_+\|isochorismatase-family-protein	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.01602e-59
NZ_CP022073.1\|WP_058668952.1\|4711009_4711921_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|184959	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional.	0
NZ_CP022073.1\|WP_024130482.1\|4698679_4699291_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	8.07713e-121
NZ_CP022073.1\|WP_058668954.1\|4705595_4707362_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0

>NZ_CP022073.1|WP_001040187.1|4710117_4710336_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP022073.1|WP_012133041.1|4709128_4709833_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAILQPETLHISRSMKRFHKRSPYRVTLNYAFGQVIEGCANDRDEGTWITRDVVEAYHRLHELGHAHSIEVWRHNALVGGMYGVSQGTLFCGESMFSRQENASKTALLVFCAEFIRQGGKLIDCQVLNSHTASLGAVEIPRRQYLEHLGSLRQQRLPGHFWVPRTLFSPQA
>NZ_CP022073.1|WP_058668953.1|4707362_4709084_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLTLYKRHKWMLTLGIILAIVTLLASIGLLTLSGWFLSASAVVGVAGIYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIHTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTLGLSVLDFTLAITLGGIMLLTLFIMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASSRYRAQMEATELQWHEAQRRQSELTALSQALMLLIGALAVMLMLWMASGGVGDNSQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASALRITELTEQQPEVTFPDGEAAAPRQVTLTLRDVSFSYPEQPQKALDALSLQVAPGEHIAILGRTGCGKSTLLQLLTRAWDPQSGDILLNDQPISTLDEAALRRTISVVSQRVHLFSATLRDNLLLAAPDANDDTLSEMLRRVGLEKLLEDGGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESQMLELLAEVMRGKTVLMVTHRLRGLSRFDQIIVMDNGQIIEQGNHADLLARQGRYYQFKQRL
>NZ_CP022073.1|WP_058668954.1|4705595_4707362_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKTRQKELTRWLKQQSVISQRWLNISRLLGFVSGVLIVAQAWIMARILQHMIMDNIPREALLLPFIVLMLVFVLRAWVVWLRERVGFHAGQHIRFEIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVCVPLLIVAAIFPSNWAAALILLGTAPLIPLFMAMVGMGAADANRRNFQALARLSGHFLDRLRGMETLRIFGRGEAETESIRVASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELNFGHYGTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPERGDVELSGKEPVTLEAQDLIITSPEGKTLVGPLNFTLAAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLCINGVELRDLSPESWRKHLSWVGQNPQLPAGTLRENVLLARPDASEQALQAALDSAWVSEFLPLLPQGVDTPTGDHAGRLSVGQAQRVAVARALLNPCKLLLLDEPAASLDAHSEQRVMQALNAASKRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGDYAQLSSANGAFATLLAHRQEDI
>NZ_CP022073.1|WP_058668955.1|4704513_4705482_+|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFDTEIIFDHINSVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLANIAAEVHLIHRRDGFRAEKILIKRLMDKVENGNIVLHTHRTLEEVTGDQMGVTGLRLRDTQNPDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSVPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDSLADACK
>NZ_CP022073.1|WP_000228469.1|4703471_4703966_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP022073.1|WP_081091655.1|4699413_4703337_-|DNA-translocase-FtsK
MSQEYTEDKEVTLKKLSSGRRLLEALLILIALFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGAPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSNDDYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTITLLCVWAAGLTLFTGWSWVSIAEKLGGWLLNILTFASNRTRRDDTWVDDDEYEDDDEYEEDEVVGAQRESRRARILRGALARRKRLAEKFSNPRGRHTDAALFSGKRMDDEDDIEYSARGVAADPDDVLFSGHRATQPEYEEYDPLLNGHSVTEPVASAAAATTATQAWAAPVDPVMSAPSVPGAEAAPAQPVVEWQPVPGPQTGESVIAPAPESYPPQPQYAQPQAPHHEPWQQPAPTEPQAQYYAEHAYEQPVPQEPAAEQPWHPEPVYPQEPVYQHEPTFEPQPAYPQEPVQDTYYQQQPAVEPPSAVEPEPVAEEIKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPAKAPEPVKPSAPTAASVPPVESVATVAPLAAGVKDATLAAGAAAASAAPAFSPVSGGAPRPQVKEGIGPQLPRPNRVRVPTRRELASYGIKLPSQRIAEEKARAAGRHQYDAETQYTDDEIDEMQQDELARQFAQSQQHRYGSEYQHDAPQAEDEDAAEAELARQFASSQQQRYAGEQPAGAHPFSLDDFEFSPMKALVDEGPHEPLFTPGVMPEQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVVPQQPYQQPQQPAAPQPQESLIHPLLMRNGDSRPLQKPTTPLPSLDLLTPPPSAVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRENPSPLTVVLGKDIAGDPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERRYKLMSALGVRNLAGYNEKIAEAARMGRPIPDPYWKPGDSMDAQHPVLEKLPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQGGAESLLGMGDMLYSGPNSTMPVRVHGAFVRDQEVHAVVQDWKARGRPQYIDGITSDSESEGGSGGFDGGEELDPLFDQAVSFVTEKRKASISGVQRQFRIGYNRAARIVEQMEAQGIVSEQGHNGNREVLAPPPFE
>NZ_CP022073.1|WP_024130482.1|4698679_4699291_-|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSGFVVSSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFFNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKSSSGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNSAVDASKFTFTPPQGVTVDDQRK
>NZ_CP022073.1|WP_024130481.1|4697325_4698669_-|replication-associated-recombination-protein-A
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTTEDIEQVLNQAMDDKARGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLLPALLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEVYFPPEIAQTRYYHPTNRGLEGKIGEKLAWLAEQDQNSPTKRYR
>NZ_CP022073.1|WP_058668956.1|4695941_4697234_-|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELESLQAEIRDIALTIPNLPADDVPVGKDENDNVEVSRWGTPREFDFDVRDHVTLGEMHVGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDALPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEESMDALEEMTGHAEKVLQLLGLPYRKIVLCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>NZ_CP022073.1|WP_058668952.1|4711009_4711921_-|LysR-family-transcriptional-regulator
MTKPDLNDFAWFVHVVEEGGFAAAGRALDEPKSKLSRRIAQLEERLGVRLIQRTTRQFNVTEVGQTFYEHCKAMLVEAQAAQDAIAALQVEPRGIVKLTCPVTLLHVHIGPMLAKFMARYPDVSLQLEATNRRVDVVGEGIDVAIRVRPRPFEDSDLVMRVLADRGHRLFASPTLVQRMGNPSSPAELHHWPGLSLASGKHIHRWELFGPQGARAEVHFTPRLITTDMLALREAAVAGVGLVQLPVLMVKDQLAAGELVALLEGWEPRREVIHAVFPSRRGLLPSVRALVDFLTEEYARMVED
>NZ_CP022073.1|WP_058668951.1|4712029_4712896_+|pirin-family-protein
MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAEQLSPFLLLDYAGPHTFAPGAENEKRGVGEHPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMTAGAGILHEEFHSSAFTQQGGELEMVQLWVNLPAKDKMAVPGYQSISSDLIPAVTLPDEAGTARIIAGRYQDVKGPAHTFSPLNVWDMRLQRDRHLTLPVAEGWSTALVVLKGSITVNGTTPVNEAQLVVLSQEGENLYLEASSDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI
>NZ_CP022073.1|WP_012133047.1|4712917_4713595_+|isochorismatase-family-protein
MSSPANFNGLRPVIDVNDSVMLLIDHQSGLFQTVGDMPMPELRARAAALAKMATLSKMPVITTASVPQGPNGPLIPEIHANAPHAQYIARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVASELQGTWNREDAAEWAEVYTKVFPAYQLLIESYSKAQEVVKNGEILDSQR
>NZ_CP022073.1|WP_058668950.1|4714090_4714645_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLDLRVLPDPEFNTEMLMAALFAKLHRALGARGKGDIGVSFPQFGVTPGSCLRLHGSLSALQELEAGSWRKGLNDYCQCMAITPVPAVKGWRTVSRVQVKSSPQRLLRRSVRKGWLTEEQAQQRLVESTEQHSDLPYLNVKSLSNQQQFRVFIRHGELRSEPVSGTFTSYGLSSTATIPWF
>NZ_CP022073.1|WP_058668949.1|4714654_4715656_-|type-I-F-CRISPR-associated-protein-Csy3
MAKAPVSVKTASVLAFERKLATSDAMMYAGNWQSDHWQPIEIQEKAVRGTISNRLKNAISSDPAKLDAEIQKANLQRVDIAALPADADTLKVVFTLRVLGNLSTPSVCNDMAYQDALQQVIDGYINEYGFGELARRYATNLANGRFLWRNRIGAEQIQVNVAASGQEWIFNSHNYSLREFEQEDASLSQLAAIIEKGLSGQEWVMLTVEAQVRLGAGQEVFPSQELVLDSNSSKSRVLYQVSGVAGIHSQKIGNALRTVDTWHPKVEELGAIAVEPYGSVTSRGVACRQPKDKMDFYTLLDNWVTKGMKPDAAQQHYVMAVLVRGGVFGEKSE
>NZ_CP022073.1|WP_058668948.1|4715666_4716602_-|type-I-F-CRISPR-associated-protein-Csy2
MRYLILLPHIRIENVNAVAGLTWGFPAISHFLGYVHALSRKVRATHGVHFDGCAVISHHSHVQAYSSGRDYQFALTRNPLTKEEKTASFNEEGRMHLTVSLVIECQGEIVNGEYGKEAFCSRLKMLCQSQKLAGGSIVSLRDPQVFPAPDDEKQLRQILWRLMPGFALCDRSEWLTTHYHQRRQQQPESTLLDAWLDFAAIQYRAIPPGEGDNAQWEYQPKPMPGYLVPLMCGYQRISPLYPPGEVASARDNSTPFAFTEAVYGVGEWRGLHRVTDIQPLLWRYRTTDTGYYCSAMPVADDFTFNEDDDLE
>NZ_CP022073.1|WP_058668947.1|4716589_4717912_-|type-I-F-CRISPR-associated-protein-Csy1
MTTEALTHFITDYIASRRQPKLEAFEKEAAKRLAQGEDASTIALERQALEARYQPQNWLTDAARRAEQISLVTHAAKFTHGDSKSSSIYRDTVGEEGYLSTASLKNLPTDAVGNAAALDVAKLLQTDVEGDSLLACLKRGEHQPLHAFAENDAQLTQWVEGFNRALTPTQPASHKLAKQVYFPVDNDYHLLCPLFATSLAQVLHEKLVASRFGEEAKAVRDARKAGKWHPQPDVRYPDMAEMHFGGTKPQNISALNSARGGRIWLLSSQPPQWLNLDKAPQNMRNLFALRGAFNRAASGIVSRMVFLLKENTEKNNHAIRNARAAYVDELIDLLFMHAATFQQASWQGWTRNNTDLPLHQQLWLDPWRGQTDETFRLERDKDDWQISVADDFARWLNYRLNKARLDVGLVERREWRTQSLFRQRMREMEAILREALKCVI
>NZ_CP022073.1|WP_058668946.1|4717929_4721160_-|type-I-F-CRISPR-associated-helicase-Cas3
MNVLIISRCTKRAREESCRILDQFAERTGDAAWQTIITLEGVNTLRRLLRKTARRNTAVACHWLKKNGQMELLWIVGNIRRFNAQGRVPTNRTTQTLITNTDEHRWRCAESIALLAAIAGLFHDFGKAGFCFQESLTKKTAKSYQPYRHEWVSVRLFQAFIGEQHDEQWLAKLGELSADDDAELLARLHKDNPCYSDSPFRTLPPLASVVAWLILSHHRLPENLRGDNVLEGCQSWLENQLNADWNAVNHIKEGWRDVDFRNVWVFPSGTPVQSRVWREKARQISRRAKNAAALKQWGQMDQLFTLHMARFCLMLADHFYSSSHPHPTWQDPDYCVWANSDRKNGTLKQRVDEHLTGVAHHALLLGRQLARVRSSLPAIARHKGFRERSGNPLYHWQNKAWDVAAALRERSREEGFFGVNMASTGCGKTFANARIMYALADEQEGCRFTVAMGLRTLTLQTGDALRNRLKLDDDDLAVLIGSGAVKQLWQKEKEPEPDRDSASAKALSEEQQYVHYEGSVQTGALEKWLSGDRKLSALVSAPVLVTTLDHLISATEGVRGGKQLPAMLRLLTSDLVLDEPDDFDIADLHAVCRLMNWAGMLGTRVLLSSATLPPDLIQAMFAAWLAGRKVWQASCGASEKPMNICCVWFDEKGAKVEHIADGRSFSIAHKTFVEQRAAMLAAKPRLHFGRISPVSPASPEVSDVITCVARAVHTEMQVLHHAHKETHPGGKTVSLGLVRFANIDPLVAVAKALMAIPSPQDVCIHYCVYHARHPLAVRSAIEKCLDSAFTRHQPDTLWQHPDIAKALNLRPEKHHLFVVLGTSVMEVGRDWDSSWGIIEPSSMRSIIQFAGRIQRHRRVVPENENLVILSSNIKALRKRSPAFCKPGFENKDHPLASHDLRELLPPQDYQTITALPRILPANGENKLAELEHMRLREELLSSKSRQVIAANWWRKPLTWNAWLQRKTPFRQSQPEARFFLHMEEEESEPYFAFHTENGNIKASDKFVLQDVEYAEGTDHWGCTDYRQVLLALADAQQTEINRVGEIFGEISVPVNEEDVTSDWRYHPWLGVYRDIN
>NZ_CP022073.1|WP_049009757.1|4721156_4722134_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MSANSIMPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYITSAGNESYYWNIPVANTTAVMLGMGTSVSQAAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLSPQSEYRPTEYLQHWVSFWFKEEKRLIAAKMFQKIRLQQIEKYWLAPSSQKIFQPDRERLNDIITRADASMAQAEDHTHLMLKEAQLTKALYKLVSQTVGYGDFTRAKRGGGLDMANRFLDQGNYLAYGLAAVAAWVTGLPHGLAVMHGKTRRGGLVFDLADLIKDALVMPQAFIAAMEGEDAQAFRQRCINRFQQSDALDLMITTLQDTARQLAEDSE
>NZ_CP022073.1|WP_012133049.1|4723296_4725573_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPSQSSDPGNQPNSEEQVGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTLYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVDETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSTEVIHQVVDKFIVELQVQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMTRVVQDNLKKPLANELLFGSLVGGGQVTVALDKEKNELTYGFQSAQKHKPEAAH

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Crispr_ID: NZ_CP022073_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022073_20

4722248-4723055

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAACGTCCA	PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

13 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP022073_20

>merge|NZ_CP022073|20|4722248-4723055|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TGTGGTAGCTGCCTGTACGGCAGTGAACAAGAAAAGTCGGCGATAATGGAATGCCCATGTTTTCTAAGCTGCCTGTACGGCAGTGAACTTCCACAGCGTTTTGACTACGATTTTAATTTCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCATATATTTGCGTGTGTGGTTCAGGTGATTTTCTAAGCTGCCTGTACGGCAGTGAACGTGTAGGTGATAATCCTAACGATGACGTGTTCTTTCTAAGCTGCCTGTACGGCAGTGAACTTTGTGCTGCCGAGCATGTTTACGAAAGTTGCTTTCTAAGCTGCCTGTACGGCAGTGAACGAGTAAAAACTATGGGATGGGGTTCTGCTATTTTTCTAAGCTGCCTGTACGGCAGTGAACGCACCAGTGTTACATATACCCCTGCGGCACCTTTTCTAAGCTGCCTGTACGGCAGTGAACGATCATCATACGGTTGTTGCTGCACATCTGATTTTCTAAGCTGCCTGTACGGCAGTGAACTAGTTGTCCCAACACTCATTCAAACTGGATACTTTCTAAGCTGCCTGTACGGCAGTGAACTGTAGTCCAGGGTTATTCCATCGTATCCATTCTTTCTAAGCTGCCTGTACGGCAGTGAACATGTATTTGCTCGCCTCTGGACATCCATTTACTTTCTAAGCTGCCTGTACGGCAGTGAACAACAAAAGCGCGACCAGTAAGTCATCACCAACTTTCTAAGCTGCCTGTACGGCAGTGAACTCGATGTAGGCGCGCAGGCCGAGTGCGCGAGCTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP022073|20|20|4722248-4723055|CRISPRCasFinder
TGTGGTAGCTGCCTGTACGGCAGTGAAC	AAGAAAAGTCGGCGATAATGGAATGCCCATGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCCACAGCGTTTTGACTACGATTTTAATTTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCATATATTTGCGTGTGTGGTTCAGGTGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTGTAGGTGATAATCCTAACGATGACGTGTTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGTGCTGCCGAGCATGTTTACGAAAGTTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGTAAAAACTATGGGATGGGGTTCTGCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCACCAGTGTTACATATACCCCTGCGGCACCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCATCATACGGTTGTTGCTGCACATCTGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGTTGTCCCAACACTCATTCAAACTGGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAGTCCAGGGTTATTCCATCGTATCCATTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTATTTGCTCGCCTCTGGACATCCATTTAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACAAAAGCGCGACCAGTAAGTCATCACCAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGATGTAGGCGCGCAGGCCGAGTGCGCGAGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP022073|20|2|4722248-4723055|CRT
TGTGGTAGCTGCCTGTACGGCAGTGAAC	AAGAAAAGTCGGCGATAATGGAATGCCCATGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCCACAGCGTTTTGACTACGATTTTAATTTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCATATATTTGCGTGTGTGGTTCAGGTGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTGTAGGTGATAATCCTAACGATGACGTGTTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGTGCTGCCGAGCATGTTTACGAAAGTTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGTAAAAACTATGGGATGGGGTTCTGCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCACCAGTGTTACATATACCCCTGCGGCACCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCATCATACGGTTGTTGCTGCACATCTGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGTTGTCCCAACACTCATTCAAACTGGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAGTCCAGGGTTATTCCATCGTATCCATTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTATTTGCTCGCCTCTGGACATCCATTTAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACAAAAGCGCGACCAGTAAGTCATCACCAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGATGTAGGCGCGCAGGCCGAGTGCGCGAGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP022073|20|2|4722254-4722402|PILER-CR
AGCTGCCTGTACGGCAGTGAACAAGAAAAGTCGGCG	ATAATGGAATGCCCATGTTTTCTAAGCTGCCT
GTACGGCAGTGAACTTCCACAGCGTTTTGACTACGA	TTTTAATTTCTTTCTAAGCTGCCTGTA
CGGCAGTGAACGTTCATATATTTGCGTGTGTGGTTCAGGTGATTTTCTAAGCTGCCTGTACGGCAGTGAACGTGTAGGTGATAATCCTAACGATGACGTGTTCTTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGTGCTGCCGAGCATGTTTACGAAAGTTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGTAAAAACTATGGGATGGGGTTCTGCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCACCAGTGTTACATATACCCCTGCGGCACCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCATCATACGGTTGTTGCTGCACATCTGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGTTGTCCCAACACTCATTCAAACTGGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAGTCCAGGGTTATTCCATCGTATCCATTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTATTTGCTCGCCTCTGGACATCCATTTAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACAAAAGCGCGACCAGTAAGTCATCACCAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGATGTAGGCGCGCAGGCCGAGTGCGCGAGC


>NZ_CP022073|20|3|4722488-4723055|PILER-CR
	ATAATGGAATGCCCATGTTTTCTAAGCTGCCT
GTACGGCAGTGAACTTCCACAGCGTTTTGACTACGA	TTTTAATTTCTTTCTAAGCTGCCTGTA
CGGCAGTGAACGTTCATATATTTGCGTGTGTGGTTCAGGTGATTTTCTAAGCTGCCTGTACGGCAGTGAACGTGTAGGTGATAATCCTAACGATGACGTGTTCTTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGTGCTGCCGAGCATGTTTACGAAAGTTGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAGTAAAAACTATGGGATGGGGTTCTGCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCACCAGTGTTACATATACCCCTGCGGCACCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATCATCATACGGTTGTTGCTGCACATCTGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGTTGTCCCAACACTCATTCAAACTGGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAGTCCAGGGTTATTCCATCGTATCCATTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTATTTGCTCGCCTCTGGACATCCATTTAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACAAAAGCGCGACCAGTAAGTCATCACCAAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGATGTAGGCGCGCAGGCCGAGTGCGCGAGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022073.1\|WP_058668951.1\|4712029_4712896_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP022073.1\|WP_001040187.1\|4710117_4710336_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP022073.1\|WP_058668950.1\|4714090_4714645_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP022073.1\|WP_012133049.1\|4723296_4725573_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP022073.1\|WP_058668947.1\|4716589_4717912_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP022073.1\|WP_058668946.1\|4717929_4721160_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|274201
NZ_CP022073.1\|WP_024130488.1\|4735339_4736308_+\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP022073.1\|WP_024130485.1\|4729811_4731470_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP022073.1\|WP_058668945.1\|4728547_4729663_-\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP022073.1\|WP_058668949.1\|4714654_4715656_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP022073.1\|WP_024130487.1\|4733675_4735328_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP022073.1\|WP_049009757.1\|4721156_4722134_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NZ_CP022073.1\|WP_024130486.1\|4731760_4732456_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP022073.1\|WP_012133055.1\|4732630_4733530_+\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP022073.1\|WP_000447499.1\|4726247_4726469_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP022073.1\|WP_012133047.1\|4712917_4713595_+\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238494
NZ_CP022073.1\|WP_058668952.1\|4711009_4711921_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|184959
NZ_CP022073.1\|WP_012133050.1\|4725603_4725924_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP022073.1\|WP_047457825.1\|4726604_4728551_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP022073.1\|WP_058668948.1\|4715666_4716602_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221

Protein	Function_ID	Function_description	E-value
NZ_CP022073.1\|WP_058668951.1\|4712029_4712896_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	3.8435e-100
NZ_CP022073.1\|WP_001040187.1\|4710117_4710336_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP022073.1\|WP_058668950.1\|4714090_4714645_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.23753e-93
NZ_CP022073.1\|WP_012133049.1\|4723296_4725573_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP022073.1\|WP_058668947.1\|4716589_4717912_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	8.78787e-174
NZ_CP022073.1\|WP_058668946.1\|4717929_4721160_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP022073.1\|WP_024130488.1\|4735339_4736308_+\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP022073.1\|WP_024130485.1\|4729811_4731470_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP022073.1\|WP_058668945.1\|4728547_4729663_-\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP022073.1\|WP_058668949.1\|4714654_4715656_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP022073.1\|WP_024130487.1\|4733675_4735328_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP022073.1\|WP_049009757.1\|4721156_4722134_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	0
NZ_CP022073.1\|WP_024130486.1\|4731760_4732456_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	3.13967e-147
NZ_CP022073.1\|WP_012133055.1\|4732630_4733530_+\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	1.46787e-116
NZ_CP022073.1\|WP_000447499.1\|4726247_4726469_+\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	5.83011e-48
NZ_CP022073.1\|WP_012133047.1\|4712917_4713595_+\|isochorismatase-family-protein	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.01602e-59
NZ_CP022073.1\|WP_058668952.1\|4711009_4711921_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|184959	PRK14997, PRK14997, LysR family transcriptional regulator; Provisional.	0
NZ_CP022073.1\|WP_012133050.1\|4725603_4725924_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	4.79395e-49
NZ_CP022073.1\|WP_047457825.1\|4726604_4728551_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP022073.1\|WP_058668948.1\|4715666_4716602_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.07871e-137

>NZ_CP022073.1|WP_049009757.1|4721156_4722134_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MSANSIMPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYITSAGNESYYWNIPVANTTAVMLGMGTSVSQAAMREFARAGVMVGFCGTDGTPLYSANEVDIDVSWLSPQSEYRPTEYLQHWVSFWFKEEKRLIAAKMFQKIRLQQIEKYWLAPSSQKIFQPDRERLNDIITRADASMAQAEDHTHLMLKEAQLTKALYKLVSQTVGYGDFTRAKRGGGLDMANRFLDQGNYLAYGLAAVAAWVTGLPHGLAVMHGKTRRGGLVFDLADLIKDALVMPQAFIAAMEGEDAQAFRQRCINRFQQSDALDLMITTLQDTARQLAEDSE
>NZ_CP022073.1|WP_058668946.1|4717929_4721160_-|type-I-F-CRISPR-associated-helicase-Cas3
MNVLIISRCTKRAREESCRILDQFAERTGDAAWQTIITLEGVNTLRRLLRKTARRNTAVACHWLKKNGQMELLWIVGNIRRFNAQGRVPTNRTTQTLITNTDEHRWRCAESIALLAAIAGLFHDFGKAGFCFQESLTKKTAKSYQPYRHEWVSVRLFQAFIGEQHDEQWLAKLGELSADDDAELLARLHKDNPCYSDSPFRTLPPLASVVAWLILSHHRLPENLRGDNVLEGCQSWLENQLNADWNAVNHIKEGWRDVDFRNVWVFPSGTPVQSRVWREKARQISRRAKNAAALKQWGQMDQLFTLHMARFCLMLADHFYSSSHPHPTWQDPDYCVWANSDRKNGTLKQRVDEHLTGVAHHALLLGRQLARVRSSLPAIARHKGFRERSGNPLYHWQNKAWDVAAALRERSREEGFFGVNMASTGCGKTFANARIMYALADEQEGCRFTVAMGLRTLTLQTGDALRNRLKLDDDDLAVLIGSGAVKQLWQKEKEPEPDRDSASAKALSEEQQYVHYEGSVQTGALEKWLSGDRKLSALVSAPVLVTTLDHLISATEGVRGGKQLPAMLRLLTSDLVLDEPDDFDIADLHAVCRLMNWAGMLGTRVLLSSATLPPDLIQAMFAAWLAGRKVWQASCGASEKPMNICCVWFDEKGAKVEHIADGRSFSIAHKTFVEQRAAMLAAKPRLHFGRISPVSPASPEVSDVITCVARAVHTEMQVLHHAHKETHPGGKTVSLGLVRFANIDPLVAVAKALMAIPSPQDVCIHYCVYHARHPLAVRSAIEKCLDSAFTRHQPDTLWQHPDIAKALNLRPEKHHLFVVLGTSVMEVGRDWDSSWGIIEPSSMRSIIQFAGRIQRHRRVVPENENLVILSSNIKALRKRSPAFCKPGFENKDHPLASHDLRELLPPQDYQTITALPRILPANGENKLAELEHMRLREELLSSKSRQVIAANWWRKPLTWNAWLQRKTPFRQSQPEARFFLHMEEEESEPYFAFHTENGNIKASDKFVLQDVEYAEGTDHWGCTDYRQVLLALADAQQTEINRVGEIFGEISVPVNEEDVTSDWRYHPWLGVYRDIN
>NZ_CP022073.1|WP_058668947.1|4716589_4717912_-|type-I-F-CRISPR-associated-protein-Csy1
MTTEALTHFITDYIASRRQPKLEAFEKEAAKRLAQGEDASTIALERQALEARYQPQNWLTDAARRAEQISLVTHAAKFTHGDSKSSSIYRDTVGEEGYLSTASLKNLPTDAVGNAAALDVAKLLQTDVEGDSLLACLKRGEHQPLHAFAENDAQLTQWVEGFNRALTPTQPASHKLAKQVYFPVDNDYHLLCPLFATSLAQVLHEKLVASRFGEEAKAVRDARKAGKWHPQPDVRYPDMAEMHFGGTKPQNISALNSARGGRIWLLSSQPPQWLNLDKAPQNMRNLFALRGAFNRAASGIVSRMVFLLKENTEKNNHAIRNARAAYVDELIDLLFMHAATFQQASWQGWTRNNTDLPLHQQLWLDPWRGQTDETFRLERDKDDWQISVADDFARWLNYRLNKARLDVGLVERREWRTQSLFRQRMREMEAILREALKCVI
>NZ_CP022073.1|WP_058668948.1|4715666_4716602_-|type-I-F-CRISPR-associated-protein-Csy2
MRYLILLPHIRIENVNAVAGLTWGFPAISHFLGYVHALSRKVRATHGVHFDGCAVISHHSHVQAYSSGRDYQFALTRNPLTKEEKTASFNEEGRMHLTVSLVIECQGEIVNGEYGKEAFCSRLKMLCQSQKLAGGSIVSLRDPQVFPAPDDEKQLRQILWRLMPGFALCDRSEWLTTHYHQRRQQQPESTLLDAWLDFAAIQYRAIPPGEGDNAQWEYQPKPMPGYLVPLMCGYQRISPLYPPGEVASARDNSTPFAFTEAVYGVGEWRGLHRVTDIQPLLWRYRTTDTGYYCSAMPVADDFTFNEDDDLE
>NZ_CP022073.1|WP_058668949.1|4714654_4715656_-|type-I-F-CRISPR-associated-protein-Csy3
MAKAPVSVKTASVLAFERKLATSDAMMYAGNWQSDHWQPIEIQEKAVRGTISNRLKNAISSDPAKLDAEIQKANLQRVDIAALPADADTLKVVFTLRVLGNLSTPSVCNDMAYQDALQQVIDGYINEYGFGELARRYATNLANGRFLWRNRIGAEQIQVNVAASGQEWIFNSHNYSLREFEQEDASLSQLAAIIEKGLSGQEWVMLTVEAQVRLGAGQEVFPSQELVLDSNSSKSRVLYQVSGVAGIHSQKIGNALRTVDTWHPKVEELGAIAVEPYGSVTSRGVACRQPKDKMDFYTLLDNWVTKGMKPDAAQQHYVMAVLVRGGVFGEKSE
>NZ_CP022073.1|WP_058668950.1|4714090_4714645_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLDLRVLPDPEFNTEMLMAALFAKLHRALGARGKGDIGVSFPQFGVTPGSCLRLHGSLSALQELEAGSWRKGLNDYCQCMAITPVPAVKGWRTVSRVQVKSSPQRLLRRSVRKGWLTEEQAQQRLVESTEQHSDLPYLNVKSLSNQQQFRVFIRHGELRSEPVSGTFTSYGLSSTATIPWF
>NZ_CP022073.1|WP_012133047.1|4712917_4713595_+|isochorismatase-family-protein
MSSPANFNGLRPVIDVNDSVMLLIDHQSGLFQTVGDMPMPELRARAAALAKMATLSKMPVITTASVPQGPNGPLIPEIHANAPHAQYIARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVASELQGTWNREDAAEWAEVYTKVFPAYQLLIESYSKAQEVVKNGEILDSQR
>NZ_CP022073.1|WP_058668951.1|4712029_4712896_+|pirin-family-protein
MKQITGVYTAPRPHWVGDGFPVRSLFSYQSHAEQLSPFLLLDYAGPHTFAPGAENEKRGVGEHPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMTAGAGILHEEFHSSAFTQQGGELEMVQLWVNLPAKDKMAVPGYQSISSDLIPAVTLPDEAGTARIIAGRYQDVKGPAHTFSPLNVWDMRLQRDRHLTLPVAEGWSTALVVLKGSITVNGTTPVNEAQLVVLSQEGENLYLEASSDASVLLLSGEPLNEPIVGYGPFVMNTKQEIAEAVRDFNSGRFGQI
>NZ_CP022073.1|WP_058668952.1|4711009_4711921_-|LysR-family-transcriptional-regulator
MTKPDLNDFAWFVHVVEEGGFAAAGRALDEPKSKLSRRIAQLEERLGVRLIQRTTRQFNVTEVGQTFYEHCKAMLVEAQAAQDAIAALQVEPRGIVKLTCPVTLLHVHIGPMLAKFMARYPDVSLQLEATNRRVDVVGEGIDVAIRVRPRPFEDSDLVMRVLADRGHRLFASPTLVQRMGNPSSPAELHHWPGLSLASGKHIHRWELFGPQGARAEVHFTPRLITTDMLALREAAVAGVGLVQLPVLMVKDQLAAGELVALLEGWEPRREVIHAVFPSRRGLLPSVRALVDFLTEEYARMVED
>NZ_CP022073.1|WP_001040187.1|4710117_4710336_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP022073.1|WP_012133049.1|4723296_4725573_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPSQSSDPGNQPNSEEQVGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTLYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVDETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSTEVIHQVVDKFIVELQVQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMTRVVQDNLKKPLANELLFGSLVGGGQVTVALDKEKNELTYGFQSAQKHKPEAAH
>NZ_CP022073.1|WP_012133050.1|4725603_4725924_-|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP022073.1|WP_000447499.1|4726247_4726469_+|cold-shock-like-protein-CspD
METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
>NZ_CP022073.1|WP_047457825.1|4726604_4728551_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELSNIRRSYPSGEEQVEVLKGISLQIHAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRIAGRDVSTLDSDALAQLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGTERKRRLERAEELLQRLGLGDRVDYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGDEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIHDGEIVRNPPSQKTQAGQGIAEPVVKTASGWSQFVSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAIGTNTIDIYPGKDFGDDDPQYQQALKYDDLNAIQKQPWVTSATPAVSQNLRLRYGNIDVAASANGVSGDYFNVYGMTFSEGNTFNREQLNGRAQVVVLDSNTRRQLFPNKAKVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAQAEQQLTRLLTLRHGKKDFFTWNMDGVLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGIGLSMLIAFTLQMFLPGWEIGFSPVALLTAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP022073.1|WP_058668945.1|4728547_4729663_-|macrolide-transporter-subunit-MacA
MKLKGKMKKRYLLIALIIIVAMFTLWRTLNAPLPHYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRRQAEAEWKLARVTLSRQQQLAKTQAISRQELDTATTEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRPGQKAWFTVLGDPQTRYEGALKDVLPTPEKVNDAIFYYARFEVPNPKGILRLDMTAQVHIQLTDIKNVLTIPLAALGDPVGNNRYKVTLLRNGETREREVSIGARNDTDVEIVKGLEEGDEVVISESKPGAAQ
>NZ_CP022073.1|WP_024130485.1|4729811_4731470_-|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESELYHFIREDFWFPPGDLQGREHHLHIILTFRESQPGRHRVRRYRPLEACWSPCQDGFHRIFYRLEGESAADGSVMTLRSFLDGDGHPLPVDDINRQAHHLIRLMPVLRLRDARFMRRIRNGTVPDVPDVEVTACQLDFLARELATRPQNLTDGQIRQGLSAMVQLLEHYFSEQGAGQSRHRLMRRRSNNEQRSWRYLDIINRMIDKPGGRTHRVILLGLFSTLLQAKGTLRLDKDARPLLLVEDPETRLHPIMLSVAWQLLNLLPLQRVATTNSGELLSLTPVEHVVRLVRESSRVAAWRLGPGGLSAEDGRRIAFHIRFNRASSLFSRCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLRPLVKFARRMGIEWHVLVDGDEAGKKYAATVRGLLNNDREEEREHLTALPALDMEHFMYRSGFADVFHRVAQIPENVPMNMRKIISKAIHRSSKPDLAIEVAMEAGRRGVDAVPTLFKKMFSRVLWLARGRAD
>NZ_CP022073.1|WP_024130486.1|4731760_4732456_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKEVIGYIIAQVVGGIIAAAVLYLIASGKAGFDAAASGFASNGYGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKHAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALQQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP022073.1|WP_012133055.1|4732630_4733530_+|lysine-exporter-LysO-family-protein
MFSGLLIILVPLIVGYLIPLQHQAALKLINRLLSWIVYVILFFMGISLAFLDNLASNLLAIFHYSAVSITVILLCNIAALFWLERSLPWRHNHQQEKLPSRIAMALESLKLCGVVVLGFLLGLSGLAFLKHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSMLGGVINALILGLPIKTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRTGGLEMVPAAIVHGFILSLLVPILMAFFSA
>NZ_CP022073.1|WP_024130487.1|4733675_4735328_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIASLQGLSAWAAKAREYGIIDHDVDNFAPRAFFSTLTNVNFDSPRIVGYAREAIALRESLKAQCQNIDASATVNNPMADLQLVSDDLGDLQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPSDMNALLECSMEIGQMNFKVMSILDAGETTKYGHPTPTQVNVKAVEGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVNHLEGEDFSPVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADSLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFFTPDLLAVLNEKFGLRQVTTVEEDMQQLLSA
>NZ_CP022073.1|WP_024130488.1|4735339_4736308_+|NADH-oxidoreductase
MTMPTTQCPWRMQVHHIHQETPDVWTLSLLCHDHYPYRAGQYALVSVRNSADTLRAYTISSTPGVSEYITLTIRRIDEGAGSQWLTREVKRGDYIWLSDAMGDFICEDKAEDKFLMLAAGCGVTPIMSMRRWLAKYRPQADVQVIFNVRSPQDVIFAEEWRQYPVTLVAENNATHGFVAGRLTTELLKNVPDLASRTVMTCGPAPYMDMVEQEVKALGVTRFFKEKFFTPVAEAATEGLKFTKLQPAQEFYAPVGTTLLDALESNKVPVTVACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIADGYVLACSCHPQGDLVLA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	583045-583076	3	0.906
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	396224-396261	3	0.921
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	396223-396263	4	0.902
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	126541-126572	4	0.875
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	NZ_LN868945	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence	92999-93030	4	0.875
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	105155-105186	4	0.875
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	99076-99107	4	0.875
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	126150-126181	4	0.875
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	406313-406344	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	75205-75236	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	KC139521	Salmonella phage FSL SP-004, complete genome	21912-21943	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	NC_049387	Escherichia virus P2_4B2 genome assembly, chromosome: 1	23566-23597	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MT374855	Yersinia phage vB_YpM_22, complete genome	28714-28745	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MN016939	Bacteriophage R18C, complete genome	24634-24665	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	AY251033	Bacteriophage L-413C, complete genome	23760-23791	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	NC_004745	Yersinia phage L-413C, complete genome	23760-23791	4	0.875
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MT374858	Yersinia phage vB_YpM_50, complete genome	28017-28048	4	0.875
NZ_CP022073_3	3.1\|964551\|37\|NZ_CP022073\|CRISPRCasFinder	964551-964587	37	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	126541-126577	5	0.865
NZ_CP022073_3	3.1\|964551\|37\|NZ_CP022073\|CRISPRCasFinder	964551-964587	37	NZ_LN868945	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence	92999-93035	5	0.865
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	323501-323532	5	0.844
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	609564-609595	5	0.844
NZ_CP022073_16	16.1\|4408202\|29\|NZ_CP022073\|CRISPRCasFinder	4408202-4408230	29	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11515-11543	5	0.828
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	42135-42172	5	0.868
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	16046-16083	5	0.868
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_LN868945	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence	12928-12965	5	0.868
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	156616-156653	5	0.868
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	355130-355167	5	0.868
NZ_CP022073_20	20.3\|4722396\|32\|NZ_CP022073\|CRISPRCasFinder,CRT	4722396-4722427	32	NC_009036	Shewanella baltica OS155 plasmid pSbal02, complete sequence	34312-34343	5	0.844
NZ_CP022073_20	20.3\|4722396\|32\|NZ_CP022073\|CRISPRCasFinder,CRT	4722396-4722427	32	NC_017578	Shewanella baltica OS117 plasmid pSBAL11703, complete sequence	70696-70727	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MK907239	Escherichia phage vB_EcoM-12474V, complete genome	9527-9558	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	AY135739	Bacteriophage WPhi, complete genome	23130-23161	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	AJ245959	Bacteriophage WPhi ogr (partial), int, c and cox genes and ORF78 (partial)	833-864	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MK907238	Escherichia phage vB_EcoM-12474IV, complete genome	9548-9579	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MK907237	Escherichia phage vB_EcoM-12474III, complete genome	14332-14363	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	KF322032	Enterobacteria phage fiAA91-ss, complete genome	23271-23302	5	0.844
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	MK907236	Escherichia phage vB_EcoM-12474II, complete genome	9527-9558	5	0.844
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	12829-12860	5	0.844
NZ_CP022073_20	20.15\|4722358\|27\|NZ_CP022073\|PILER-CR	4722358-4722384	27	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	207086-207112	5	0.815
NZ_CP022073_20	20.15\|4722358\|27\|NZ_CP022073\|PILER-CR	4722358-4722384	27	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	563305-563331	5	0.815
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	355129-355169	6	0.854
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	21699-21730	6	0.812
NZ_CP022073_16	16.1\|4408202\|29\|NZ_CP022073\|CRISPRCasFinder	4408202-4408230	29	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	48383-48411	6	0.793
NZ_CP022073_16	16.1\|4408202\|29\|NZ_CP022073\|CRISPRCasFinder	4408202-4408230	29	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	563859-563887	6	0.793
NZ_CP022073_20	20.15\|4722358\|27\|NZ_CP022073\|PILER-CR	4722358-4722384	27	NZ_CP020081	Vibrio campbellii strain 20130629003S01 plasmid pVCGX4, complete sequence	55660-55686	6	0.778
NZ_CP022073_20	20.15\|4722358\|27\|NZ_CP022073\|PILER-CR	4722358-4722384	27	NZ_CP019297	Vibrio campbellii strain LMB29 plasmid pLMB99, complete sequence	15541-15567	6	0.778
NZ_CP022073_16	16.1\|4408202\|29\|NZ_CP022073\|CRISPRCasFinder	4408202-4408230	29	NZ_LN868946	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence	15963-15991	7	0.759
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	263676-263713	7	0.816
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	263130-263167	7	0.816
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	422319-422356	7	0.816
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	LR134127	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7	197043-197080	7	0.816
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	NZ_CP010123	Escherichia coli strain C5 plasmid A, complete genome	16522-16553	7	0.781
NZ_CP022073_20	20.12\|4722936\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722936-4722967	32	NZ_CP049202	Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence	63135-63166	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1222934-1222965	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1186013-1186044	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1345993-1346024	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	913396-913427	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1322681-1322712	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	732766-732797	7	0.781
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	762314-762345	7	0.781
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	156615-156655	8	0.805
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP053575	Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence	37064-37104	8	0.805
NZ_CP022073_11	11.1\|3433094\|31\|NZ_CP022073\|CRISPRCasFinder	3433094-3433124	31	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194326-194356	8	0.742
NZ_CP022073_11	11.1\|3433094\|31\|NZ_CP022073\|CRISPRCasFinder	3433094-3433124	31	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204820-204850	8	0.742
NZ_CP022073_11	11.1\|3433094\|31\|NZ_CP022073\|CRISPRCasFinder	3433094-3433124	31	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195654-195684	8	0.742
NZ_CP022073_11	11.1\|3433094\|31\|NZ_CP022073\|CRISPRCasFinder	3433094-3433124	31	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176609-176639	8	0.742
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	158048-158079	8	0.75
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	323379-323410	8	0.75
NZ_CP022073_16	16.1\|4408202\|29\|NZ_CP022073\|CRISPRCasFinder	4408202-4408230	29	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	121547-121575	8	0.724
NZ_CP022073_16	16.1\|4408202\|29\|NZ_CP022073\|CRISPRCasFinder	4408202-4408230	29	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	383149-383177	8	0.724
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	289943-289980	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	73707-73744	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	197685-197722	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	47050-47087	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	734204-734241	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	171110-171147	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP053575	Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence	37066-37103	8	0.789
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_LN868946	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence	40894-40931	8	0.789
NZ_CP022073_19	19.4\|4710685\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4710685-4710716	32	NZ_KR997898	Mycobacterium avium subsp. hominissuis strain 88Br plasmid pMA100, complete sequence	6166-6197	8	0.75
NZ_CP022073_20	20.2\|4722336\|32\|NZ_CP022073\|CRISPRCasFinder,CRT	4722336-4722367	32	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	563300-563331	8	0.75
NZ_CP022073_20	20.2\|4722336\|32\|NZ_CP022073\|CRISPRCasFinder,CRT	4722336-4722367	32	CP037991	Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence	207086-207117	8	0.75
NZ_CP022073_20	20.4\|4722456\|32\|NZ_CP022073\|CRISPRCasFinder,CRT	4722456-4722487	32	MG592553	Vibrio phage 1.187.O._10N.286.49.F1, partial genome	11985-12016	8	0.75
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	461643-461674	8	0.75
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	459288-459319	8	0.75
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1126195-1126226	8	0.75
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1248081-1248112	8	0.75
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	755870-755901	8	0.75
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	58486-58526	9	0.78
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	42133-42173	9	0.78
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	208407-208447	9	0.78
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP022659	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence	31610-31650	9	0.78
NZ_CP022073_11	11.1\|3433094\|31\|NZ_CP022073\|CRISPRCasFinder	3433094-3433124	31	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19363-19393	9	0.71
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	126063-126094	9	0.719
NZ_CP022073_14	14.1\|4013770\|32\|NZ_CP022073\|CRISPRCasFinder	4013770-4013801	32	LR134132	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12	126235-126266	9	0.719
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	208409-208446	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP019910	Escherichia coli strain MDR_56 plasmid unnamed4, complete sequence	25418-25455	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	CP045556	Citrobacter sp. S39 plasmid pS39-1, complete sequence	107062-107099	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP045203	Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence	229936-229973	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP022152	Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence	64063-64100	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP019987	Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence	124429-124466	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP030224	Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence	86484-86521	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP026213	Citrobacter sp. CFNIH10 plasmid pKPC-933d, complete sequence	51137-51174	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_MG387191	Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence	109979-110016	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP048383	Citrobacter freundii strain 62 plasmid p6_A, complete sequence	127034-127071	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	172735-172772	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP042535	Citrobacter freundii strain E51 plasmid pE51_001, complete sequence	112017-112054	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP007734	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence	179832-179869	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP026058	Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence	283606-283643	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP029436	Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence	290568-290605	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP029431	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence	411223-411260	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP018017	Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence	130829-130866	9	0.763
NZ_CP022073_17	17.1\|4487587\|38\|NZ_CP022073\|CRISPRCasFinder	4487587-4487624	38	NZ_CP029442	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence	382422-382459	9	0.763
NZ_CP022073_20	20.1\|4722276\|32\|NZ_CP022073\|CRISPRCasFinder,CRT	4722276-4722307	32	NC_002682	Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence	57477-57508	9	0.719
NZ_CP022073_20	20.9\|4722756\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722756-4722787	32	NZ_CP032651	Lactobacillus plantarum strain ZFM4 plasmid unnamed3, complete sequence	2036-2067	9	0.719
NZ_CP022073_20	20.9\|4722756\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722756-4722787	32	NZ_CP032651	Lactobacillus plantarum strain ZFM4 plasmid unnamed3, complete sequence	10140-10171	9	0.719
NZ_CP022073_20	20.14\|4722290\|32\|NZ_CP022073\|PILER-CR	4722290-4722321	32	NC_002682	Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence	57477-57508	9	0.719
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	422317-422357	10	0.756
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	368805-368845	10	0.756
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP019203	Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence	16045-16085	10	0.756
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_LN868945	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence	12927-12967	10	0.756
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	35171-35211	10	0.756
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_LN868946	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence	40892-40932	10	0.756
NZ_CP022073_19	19.2\|4710565\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4710565-4710596	32	NZ_CP016454	Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence	47876-47907	10	0.688
NZ_CP022073_19	19.4\|4710685\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4710685-4710716	32	NZ_CP009356	Vibrio tubiashii ATCC 19109 plasmid p251, complete sequence	4129-4160	10	0.688
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1387512-1387543	10	0.688
NZ_CP022073_20	20.13\|4722996\|32\|NZ_CP022073\|CRISPRCasFinder,CRT,PILER-CR	4722996-4723027	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	425745-425776	10	0.688
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	263675-263715	11	0.732
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	263128-263168	11	0.732
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	47049-47089	11	0.732
NZ_CP022073_5	5.1\|2489569\|41\|NZ_CP022073\|CRISPRCasFinder	2489569-2489609	41	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	289942-289982	12	0.707

1. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 3, identity: 0.906

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ctccccggtggcgctaacgcttaccggggcta	Protospacer
*  ************************* ***

2. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 3, identity: 0.921

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttctgtaggcccggtaagcgcagcgccaccgggcaaaa	Protospacer
*.********************************* *

3. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 4, identity: 0.902

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
aattctgtaggcccggtaagcgcagcgccaccgggcaaaaa	Protospacer
* .*******************.************** ***

4. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 4, identity: 0.875

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ttgcccggtggcgctgacgcttaccgggccta	Protospacer
. *************.************.***

5. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 4, identity: 0.875

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ttgcccggtggcgctgacgcttaccgggccta	Protospacer
. *************.************.***

6. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 4, identity: 0.875

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ttgcccggtggcgcgaacgcttaccgggccta	Protospacer
. ************ *************.***

7. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 4, identity: 0.875

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ctccccggtggcgctagcgcttaccggggcta	Protospacer
*  *************.*********** ***

8. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 4, identity: 0.875

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
cttcccggtggcgcttacgcttaccggggcta	Protospacer
*  ************ ************ ***

9. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 4, identity: 0.875

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ctccccggtggcgcttacgcttaccggggcta	Protospacer
*  ************ ************ ***

10. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

11. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to KC139521 (Salmonella phage FSL SP-004, complete genome) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

12. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_049387 (Escherichia virus P2_4B2 genome assembly, chromosome: 1) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

13. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MT374855 (Yersinia phage vB_YpM_22, complete genome) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

14. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MN016939 (Bacteriophage R18C, complete genome) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

15. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to AY251033 (Bacteriophage L-413C, complete genome) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

16. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_004745 (Yersinia phage L-413C, complete genome) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

17. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MT374858 (Yersinia phage vB_YpM_50, complete genome) position: , mismatch: 4, identity: 0.875

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagcgcgacaagtaagtcatcaccagc	Protospacer
 *.*********** ***************.*

18. spacer 3.1|964551|37|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 5, identity: 0.865

gtttgtaggcccggtaagcaccagcgccaccgggcat	CRISPR spacer
atctgtaggcccggtaagcgtcagcgccaccgggcaa	Protospacer
.*.****************..***************

19. spacer 3.1|964551|37|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.865

gtttgtaggcccggtaagcaccagcgccaccgggcat	CRISPR spacer
atctgtaggcccggtaagcgtcagcgccaccgggcaa	Protospacer
.*.****************..***************

20. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.844

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
atccccggtggcgctaccgcttaccggggcta	Protospacer
   ************* *********** ***

21. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.844

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
atccccggtggcgctaccgcttaccggggcta	Protospacer
   ************* *********** ***

22. spacer 16.1|4408202|29|NZ_CP022073|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.828

gaacgt-accgccttatccggcctacatcg	CRISPR spacer
-ggcgtgaacgccttatccggcctacaacg	Protospacer
 ..*** * ****************** **

23. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.868

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttttgtaggcccggtaagcgcagcgccaccgggcaatc	Protospacer
*..********************************  .

24. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 5, identity: 0.868

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
acgtgtaggcccggtaagcgcagcgccaccgggcaacc	Protospacer
 * ********************************  .

25. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.868

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
acgtgtaggcccggtaagcgcagcgccaccgggcaacc	Protospacer
 * ********************************  .

26. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.868

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttttgtaggcccggtaagcgcagcgccaccgggcaaca	Protospacer
*..********************************

27. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 5, identity: 0.868

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
taccgtaggcccggtaagcgtagcgccaccgggcaaaa	Protospacer
* *.****************.************** *

28. spacer 20.3|4722396|32|NZ_CP022073|CRISPRCasFinder,CRT matches to NC_009036 (Shewanella baltica OS155 plasmid pSbal02, complete sequence) position: , mismatch: 5, identity: 0.844

gttcatata-tttgcgtgtgtggttcaggtgat	CRISPR spacer
-atcaaatattttgcgtgtgtgtatcaggtgat	Protospacer
  *** *** ************  *********

29. spacer 20.3|4722396|32|NZ_CP022073|CRISPRCasFinder,CRT matches to NC_017578 (Shewanella baltica OS117 plasmid pSBAL11703, complete sequence) position: , mismatch: 5, identity: 0.844

gttcatata-tttgcgtgtgtggttcaggtgat	CRISPR spacer
-atcaaatattttgcgtgtgtgtatcaggtgat	Protospacer
  *** *** ************  *********

30. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MK907239 (Escherichia phage vB_EcoM-12474V, complete genome) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccatc	Protospacer
 *.*****.***** *************** *

31. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to AY135739 (Bacteriophage WPhi, complete genome) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccagc	Protospacer
 *.*****.***** ***************.*

32. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to AJ245959 (Bacteriophage WPhi ogr (partial), int, c and cox genes and ORF78 (partial)) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccagc	Protospacer
 *.*****.***** ***************.*

33. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MK907238 (Escherichia phage vB_EcoM-12474IV, complete genome) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccatc	Protospacer
 *.*****.***** *************** *

34. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MK907237 (Escherichia phage vB_EcoM-12474III, complete genome) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccatc	Protospacer
 *.*****.***** *************** *

35. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to KF322032 (Enterobacteria phage fiAA91-ss, complete genome) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccatc	Protospacer
 *.*****.***** *************** *

36. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to MK907236 (Escherichia phage vB_EcoM-12474II, complete genome) position: , mismatch: 5, identity: 0.844

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
cataaaagtgcgacaagtaagtcatcaccatc	Protospacer
 *.*****.***** *************** *

37. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 5, identity: 0.844

tcgatgtaggcgcgcaggccgagtgcgcgagc-	CRISPR spacer
tccatgtcggcgcgcaggccgagc-cgcgggcc	Protospacer
** **** ***************. ****.**

38. spacer 20.15|4722358|27|NZ_CP022073|PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

cagcgttttgactacgattttaatttc	CRISPR spacer
aacagtattgactacaattttaatttc	Protospacer
 *  ** ********.***********

39. spacer 20.15|4722358|27|NZ_CP022073|PILER-CR matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 5, identity: 0.815

cagcgttttgactacgattttaatttc	CRISPR spacer
aacggtattgactacaattttaatttc	Protospacer
 *  ** ********.***********

40. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.854

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
cttaccgtaggcccggtaagcgtagcgccaccgggcaaaat	Protospacer
 *. *.******************************* **

41. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 6, identity: 0.812

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
gagcccggaggcgctaacgcttaccgggctgt	Protospacer
 ******* *******************..

42. spacer 16.1|4408202|29|NZ_CP022073|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 6, identity: 0.793

gaacgtaccgccttatccggcctacatcg	CRISPR spacer
cggcgtaccgccttatccggcctacagac	Protospacer
 ..***********************

43. spacer 16.1|4408202|29|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 6, identity: 0.793

gaacgtaccgccttatccggcctacatcg	CRISPR spacer
gcgcgtagcgccttatccgggctacaatg	Protospacer
* .**** ************ ***** .*

44. spacer 20.15|4722358|27|NZ_CP022073|PILER-CR matches to NZ_CP020081 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX4, complete sequence) position: , mismatch: 6, identity: 0.778

cagcgttttgactacgattttaatttc	CRISPR spacer
acgtcatttgactacgattttgatttc	Protospacer
  *.  ***************.*****

45. spacer 20.15|4722358|27|NZ_CP022073|PILER-CR matches to NZ_CP019297 (Vibrio campbellii strain LMB29 plasmid pLMB99, complete sequence) position: , mismatch: 6, identity: 0.778

cagcgttttgactacgattttaatttc	CRISPR spacer
acgtcatttgactacgattttgatttc	Protospacer
  *.  ***************.*****

46. spacer 16.1|4408202|29|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 7, identity: 0.759

gaacgtaccgccttatccggcctacatcg	CRISPR spacer
ggcggctacgccttacccggcctacatcg	Protospacer
*.  *.  *******.*************

47. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 7, identity: 0.816

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
gatcgtaggcccggtaagcgcagcgccaccgggcaatg	Protospacer
  ..*******************************

48. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 7, identity: 0.816

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
acccgtaggcccggtaagcgaagcgccaccgggctttg	Protospacer
 **.**************** ************* .

49. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 7, identity: 0.816

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ccacgtaggcccggtaagcgtagcgccaccgggctttt	Protospacer
.* .****************.************* . *

50. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to LR134127 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 7) position: , mismatch: 7, identity: 0.816

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
tttcgtaggcccggtaagcaaagcgccaccgggcaaaa	Protospacer
*...***************. ************** *

51. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010123 (Escherichia coli strain C5 plasmid A, complete genome) position: , mismatch: 7, identity: 0.781

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
aatacattggcgaccagtaagccatcaccgac	Protospacer
**.* *   ************.*******.**

52. spacer 20.12|4722936|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049202 (Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence) position: , mismatch: 7, identity: 0.781

aacaaaagcgcgaccagtaagtcatcaccaac	CRISPR spacer
aatacattggcgaccagtaagccatcaccgac	Protospacer
**.* *   ************.*******.**

53. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

54. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

55. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

56. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

57. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

58. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

59. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgcatgccgagatcgtcagg	Protospacer
******* ******** ******  **. **

60. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.805

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
gattttgtaggcccggtaagcgcagcgccaccgggcaacac	Protospacer
. .*.*****************.**************  *

61. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP053575 (Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.805

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
ataacggtaggcccggtaagcgaagcgtcaccgggcaagag	Protospacer
**  * **************** ****.********* .*.

62. spacer 11.1|3433094|31|NZ_CP022073|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.742

ttcgcttatcaggcctacactcctcactgtt	CRISPR spacer
tacgcttatcaggcctacaattctcgcgcca	Protospacer
* ***************** *.***.*  .

63. spacer 11.1|3433094|31|NZ_CP022073|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.742

ttcgcttatcaggcctacactcctcactgtt	CRISPR spacer
tacgcttatcaggcctacaattctcgcgcca	Protospacer
* ***************** *.***.*  .

64. spacer 11.1|3433094|31|NZ_CP022073|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.742

ttcgcttatcaggcctacactcctcactgtt	CRISPR spacer
tacgcttatcaggcctacaattctcgcgcca	Protospacer
* ***************** *.***.*  .

65. spacer 11.1|3433094|31|NZ_CP022073|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.742

ttcgcttatcaggcctacactcctcactgtt	CRISPR spacer
tacgcttatcaggcctacaattctcgcgcca	Protospacer
* ***************** *.***.*  .

66. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 8, identity: 0.75

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
aggccgggtggcgctaacgcttacccggctac	Protospacer
 .*** ******************* **..

67. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 8, identity: 0.75

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ttgccgggtggcgctaacgcttgcccgtcctg	Protospacer
. *** ****************.** * .**.

68. spacer 16.1|4408202|29|NZ_CP022073|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 8, identity: 0.724

gaacgtaccgccttatccggcctacatcg	CRISPR spacer
gcggctaacgccttatccggcctacaggt	Protospacer
* .  ** ******************

69. spacer 16.1|4408202|29|NZ_CP022073|CRISPRCasFinder matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

gaacgtaccgccttatccggcctacatcg	CRISPR spacer
cagggttccgccttatccggcctactgaa	Protospacer
 *. ** ******************   .

70. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
atgggtagggccggtaagcgcagcgccaccgggcttct	Protospacer
 .  ***** ************************ . *

71. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
tttcgtaggccgggtaagcgcagcgccacccggcagta	Protospacer
*...******* ****************** ****

72. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
aaatgtaggccgggtaagcgcagcgccacccggctttt	Protospacer
   ******** ****************** *** . *

73. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
cattgtagccccggtaagcgcagcgccaccggggagcg	Protospacer
. .***** ************************ *

74. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
atccgtagccccggtaagcgaagcgccaccggggaggt	Protospacer
 .*.**** *********** ************ * .*

75. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
atttgtaggccgggtaagcgcagcgccacccggcaata	Protospacer
 ..******** ****************** ****

76. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP053575 (Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
aacggtaggcccggtaagcgaagcgtcaccgggcaaga	Protospacer
  * **************** ****.********* .

77. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 8, identity: 0.789

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ggcggtaagcccggtaagcgaagcgccaccgggcaaga	Protospacer
  * ***.************ ************** .

78. spacer 19.4|4710685|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KR997898 (Mycobacterium avium subsp. hominissuis strain 88Br plasmid pMA100, complete sequence) position: , mismatch: 8, identity: 0.75

tgcaacatcagcctggcggtattttgctgact	CRISPR spacer
ggcaacatccgcctggcggaatttgattgcca	Protospacer
 ******** ********* **** ..** *

79. spacer 20.2|4722336|32|NZ_CP022073|CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 8, identity: 0.75

ttccacagcgttttgactacgattttaatttc	CRISPR spacer
ttaggaacggtattgactacaattttaatttc	Protospacer
**  . *  ** ********.***********

80. spacer 20.2|4722336|32|NZ_CP022073|CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttccacagcgttttgactacgattttaatttc	CRISPR spacer
ttaggaacagtattgactacaattttaatttc	Protospacer
**  . *  ** ********.***********

81. spacer 20.4|4722456|32|NZ_CP022073|CRISPRCasFinder,CRT matches to MG592553 (Vibrio phage 1.187.O._10N.286.49.F1, partial genome) position: , mismatch: 8, identity: 0.75

gtgtaggtgataatcctaacgatgacgtgttc	CRISPR spacer
atttaggttataatcctaacgaagacgcatca	Protospacer
.* ***** ************* ****..*.

82. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatgtaggcgcgcaggccgag---tgcgcgagc	CRISPR spacer
tcgatgtcggcgcgaaggccgagatctatgct---	Protospacer
******* ****** ********   *..**

83. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatgtaggcgcgcaggccgag---tgcgcgagc	CRISPR spacer
tcgatgtcggcgcgaaggccgagatctatgct---	Protospacer
******* ****** ********   *..**

84. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatgtaggcgcgcaggccgag---tgcgcgagc	CRISPR spacer
tcgatgtcggcgcgaaggccgagatttatgct---	Protospacer
******* ****** ********   *..**

85. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatgtaggcgcgcaggccgag---tgcgcgagc	CRISPR spacer
tcgatgtcggcgcgaaggccgagatctatgct---	Protospacer
******* ****** ********   *..**

86. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgatgtcggcgcgaaggccgagatccaccgc	Protospacer
******* ****** ********  *    **

87. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 9, identity: 0.78

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
tttaccgtaggcccgataagcgtagcgccatcgggcaacag	Protospacer
 *. *.*********.**************.******  *.

88. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.78

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
ggttttgtaggcccggtaagcgcagcgccaccgggcaatct	Protospacer
. .*.*****************.**************

89. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.78

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
cgatcggtagccccggtaagcgtagcgccaccggggaagat	Protospacer
   ** **** ************************ * .*

90. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP022659 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-1, complete sequence) position: , mismatch: 9, identity: 0.78

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
tttaccgtaggcccgataagcgtagcgccatcgggcaacag	Protospacer
 *. *.*********.**************.******  *.

91. spacer 11.1|3433094|31|NZ_CP022073|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 9, identity: 0.71

ttcgcttatcaggcctacactcctcactgtt	CRISPR spacer
tacgcttatcaggcctacaattctcgggcca	Protospacer
* ***************** *.***.   .

92. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 9, identity: 0.719

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ttccccggtagcgcttacgcttaccgggctac	Protospacer
.  ******.***** ************..

93. spacer 14.1|4013770|32|NZ_CP022073|CRISPRCasFinder matches to LR134132 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 12) position: , mismatch: 9, identity: 0.719

cagcccggtggcgctaacgcttaccgggtcta	CRISPR spacer
ttccccggtagcgcttacgcttaccgggctat	Protospacer
.  ******.***** ************..

94. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
atcggtagccccggtaagcgtagcgccaccggggaaga	Protospacer
 .* **** ***********.************ * .

95. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019910 (Escherichia coli strain MDR_56 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
aaaagtaggccgggtaagcgcagcgccacccggcattc	Protospacer
    ******* ****************** ****. .

96. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to CP045556 (Citrobacter sp. S39 plasmid pS39-1, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

97. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP045203 (Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

98. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP022152 (Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

99. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019987 (Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

100. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP030224 (Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

101. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP026213 (Citrobacter sp. CFNIH10 plasmid pKPC-933d, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

102. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_MG387191 (Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

103. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP048383 (Citrobacter freundii strain 62 plasmid p6_A, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

104. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP026282 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

105. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP042535 (Citrobacter freundii strain E51 plasmid pE51_001, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

106. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP007734 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-262, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

107. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP026058 (Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

108. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP029436 (Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

109. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP029431 (Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

110. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP018017 (Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

111. spacer 17.1|4487587|38|NZ_CP022073|CRISPRCasFinder matches to NZ_CP029442 (Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence) position: , mismatch: 9, identity: 0.763

tcctgtaggcccggtaagcgcagcgccaccgggcacat	CRISPR spacer
ttatgtcgccccggtaagcgcagcgccaccgggtgagg	Protospacer
*. *** * ************************.. .

112. spacer 20.1|4722276|32|NZ_CP022073|CRISPRCasFinder,CRT matches to NC_002682 (Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence) position: , mismatch: 9, identity: 0.719

aagaaaagtcggcgataatggaatgcccatgt	CRISPR spacer
ggaaaaagtcggcgacaatgggatgcgcctaa	Protospacer
...************.*****.**** * *.

113. spacer 20.9|4722756|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032651 (Lactobacillus plantarum strain ZFM4 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tagttgtcccaacactcattcaaactggatac	CRISPR spacer
tagttgtcccaccactcattaaaaacatcttg	Protospacer
*********** ******** *** ..  *

114. spacer 20.9|4722756|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032651 (Lactobacillus plantarum strain ZFM4 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tagttgtcccaacactcattcaaactggatac	CRISPR spacer
tagttgtcccaccactcattaaaaacatcttg	Protospacer
*********** ******** *** ..  *

115. spacer 20.14|4722290|32|NZ_CP022073|PILER-CR matches to NC_002682 (Mesorhizobium japonicum MAFF 303099 plasmid pMLb, complete sequence) position: , mismatch: 9, identity: 0.719

aagaaaagtcggcgataatggaatgcccatgt	CRISPR spacer
ggaaaaagtcggcgacaatgggatgcgcctaa	Protospacer
...************.*****.**** * *.

116. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 10, identity: 0.756

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
ccccacgtaggcccggtaagcgtagcgccaccgggcttttt	Protospacer
 .*. .****************************** .

117. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 10, identity: 0.756

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
tgttttgtagccccggtaagcgtagcgtcaccggggagagt	Protospacer
  .*.***** ****************.******* * *.

118. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP019203 (Salmonella enterica subsp. enterica serovar Infantis strain CFSAN003307 plasmid pCFSAN003307, complete sequence) position: , mismatch: 10, identity: 0.756

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
caacgtgtaggcccggtaagcgcagcgccaccgggcaaccc	Protospacer
   . *****************.**************

119. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868945 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.756

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
caacgtgtaggcccggtaagcgcagcgccaccgggcaaccc	Protospacer
   . *****************.**************

120. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 10, identity: 0.756

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
tgacttgtaggcccgataagcgtagcgccatcgggcaatat	Protospacer
   ..**********.**************.******  *

121. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.756

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
taggcggtaagcccggtaagcgaagcgccaccgggcaagag	Protospacer
    * ***.************ ************** .*.

122. spacer 19.2|4710565|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016454 (Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence) position: , mismatch: 10, identity: 0.688

atgcggcatttgcaacggcgattgcgatggta	CRISPR spacer
atgcgacgtttgcaacggcgattgatccttcc	Protospacer
*****.*.****************   .  .

123. spacer 19.4|4710685|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009356 (Vibrio tubiashii ATCC 19109 plasmid p251, complete sequence) position: , mismatch: 10, identity: 0.688

tgcaacatcagcctggcggtattttgctgact	CRISPR spacer
ctcaacatcagcgtggcggcatttttttacaa	Protospacer
. ********** ******.***** .*.

124. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgacgtcggcgcgcaggccgagcacttcgag	Protospacer
****.** ***************..* . ..

125. spacer 20.13|4722996|32|NZ_CP022073|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

tcgatgtaggcgcgcaggccgagtgcgcgagc	CRISPR spacer
tcgacgtcggcgcgcaggccgagcacttcgag	Protospacer
****.** ***************..* . ..

126. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 11, identity: 0.732

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
tcgatcgtaggcccggtaagcgcagcgccaccgggcaatgg	Protospacer
 .  ..****************.**************  ..

127. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 11, identity: 0.732

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
gcacccgtaggcccggtaagcgaagcgccaccgggctttgt	Protospacer
.. .*.**************** ************* . .

128. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 11, identity: 0.732

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
gccattgtagccccggtaagcgcagcgccaccggggagcgg	Protospacer
..* .***** ***********.************ *  ..

129. spacer 5.1|2489569|41|NZ_CP022073|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 12, identity: 0.707

atctctgtaggcccggtaagcgtagcgccaccgggcacaaa	CRISPR spacer
tgatgggtagggccggtaagcgcagcgccaccgggcttctg	Protospacer
   *  ***** **********.************* .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2235393 : 2286307

Salmonella_phage(76.09%)

tail,head,lysis,capsid,terminase,plate,tRNA,integrase,portal

attL 2249331:2249380|attR 2280094:2280143

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049009430.1\|2235393_2235726_+\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_077956873.1\|2235941_2237384_-	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	1.8e-32	28.0
WP_058668133.1\|2237752_2239273_+	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	5.8e-34	41.7
WP_058668132.1\|2239600_2241166_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-07	30.2
WP_058668131.1\|2241162_2241720_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_058669122.1\|2241959_2242736_+	siderophore-interacting protein	NA	NA	NA	NA
WP_058668130.1\|2242795_2244454_-	glycerone kinase	NA	NA	NA	NA
WP_127891358.1\|2244700_2245015_-	hypothetical protein	NA	NA	NA	NA
WP_024130968.1\|2245048_2246146_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_060815917.1\|2246251_2248177_+	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
WP_012135206.1\|2248894_2249218_+	DUF1889 family protein	NA	NA	NA	NA
2249331:2249380	attL	NA	NA	NA	NA
WP_023206295.1\|2249492_2250506_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	4.8e-117	60.2
WP_060937492.1\|2250511_2251057_-	hypothetical protein	NA	NA	NA	NA
WP_106068025.1\|2251082_2251733_-	phage repressor protein CI	F1BUN8	Cronobacter_phage	1.1e-26	33.5
WP_023206292.1\|2251820_2252057_+	hypothetical protein	NA	NA	NA	NA
WP_023206291.1\|2252091_2252601_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.7e-83	92.9
WP_015386352.1\|2252608_2252809_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	8.7e-31	90.9
WP_013098807.1\|2252772_2253114_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	7.6e-51	85.8
WP_060937493.1\|2253181_2253415_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	2.7e-23	77.9
WP_000785510.1\|2253414_2253642_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.0e-35	94.7
WP_106068026.1\|2253638_2254493_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	1.7e-123	78.1
WP_072274366.1\|2254489_2255674_+	DNA cytosine methyltransferase	D2XJU8	Escherichia_phage	7.1e-96	49.2
WP_060937496.1\|2255670_2258022_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	96.7
WP_001154443.1\|2258183_2258372_+	hypothetical protein	A0A1S6L006	Salmonella_phage	6.1e-26	98.4
WP_001217561.1\|2258383_2258617_+	DinI family protein	A0A1S6L014	Salmonella_phage	2.2e-33	92.2
WP_023226466.1\|2258996_2260052_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	8.1e-176	88.8
WP_060937497.1\|2260048_2260774_-\|terminase	terminase-like family protein	E5FFI8	Burkholderia_phage	2.1e-21	32.5
WP_044157610.1\|2260773_2262540_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	94.7
WP_060937498.1\|2262682_2263516_+\|capsid	GPO family capsid scaffolding protein	E5G6M5	Salmonella_phage	3.2e-127	97.1
WP_013098795.1\|2263532_2264594_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	7.8e-195	99.2
WP_060937499.1\|2264597_2265248_+	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.6e-113	99.1
WP_001528530.1\|2265341_2265806_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.9e-84	98.1
WP_000868184.1\|2265805_2266009_+\|tail	tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
WP_000171565.1\|2266012_2266228_+	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
WP_001069919.1\|2266208_2266718_+	lysozyme	A0A1S6KZY9	Salmonella_phage	2.2e-94	98.8
WP_010835207.1\|2266722_2267100_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.5e-60	97.6
WP_060937500.1\|2267099_2267525_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	4.2e-67	97.9
WP_029697325.1\|2267620_2268052_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	2.8e-74	97.2
WP_060937501.1\|2268044_2268491_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	5.4e-65	88.4
WP_032636616.1\|2268559_2269138_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.3e-106	97.4
WP_023306992.1\|2269134_2269494_+\|plate	phage baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.3e-56	93.3
WP_060937502.1\|2269480_2270389_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	7.3e-149	94.0
WP_060937503.1\|2270381_2270987_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	8.9e-111	93.5
WP_106068027.1\|2270983_2272300_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.4e-122	74.2
WP_081093761.1\|2272289_2272703_+	hypothetical protein	U5P083	Shigella_phage	4.9e-20	45.3
WP_023226484.1\|2272837_2274010_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.0e-211	93.6
WP_001207650.1\|2274019_2274535_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.3e-91	98.8
WP_023206369.1\|2274589_2274892_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	3.0e-43	96.0
WP_023206368.1\|2274906_2275026_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	5.7e-14	92.3
WP_060937504.1\|2275018_2278093_+\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	0.0e+00	74.8
WP_013098780.1\|2278089_2278575_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.7e-72	94.4
WP_060937505.1\|2278571_2279672_+	phage late control D family protein	E5G6Q3	Salmonella_phage	3.0e-189	92.6
WP_024146528.1\|2279741_2279960_+	DNA-binding transcriptional regulator	Q53ZE7	Salmonella_virus	4.9e-27	75.0
WP_012135205.1\|2280297_2280804_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
2280094:2280143	attR	NA	NA	NA	NA
WP_012135204.1\|2280855_2282700_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-34	33.7
WP_012135203.1\|2282930_2284676_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.5e-73	38.7
WP_001144069.1\|2284840_2285056_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_047461129.1\|2285293_2286307_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.6e-107	58.6

DBSCAN-SWA_2

2387423 : 2408165

Shigella_phage(66.67%)

plate,integrase,transposase

attL 2392961:2392974|attR 2407633:2407646

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_125337101.1\|2387423_2387849_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_058668093.1\|2387848_2389681_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_058668092.1\|2389647_2390691_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_058669120.1\|2390707_2391994_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_058668091.1\|2391990_2392524_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_058668090.1\|2392526_2393867_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
2392961:2392974	attL	NA	NA	NA	NA
WP_058669119.1\|2393904_2394681_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_106068028.1\|2394692_2397443_+	type VI secretion system ATPase TssH	A0A1C3S747	Escherichia_phage	1.6e-82	31.4
WP_058668088.1\|2397439_2398171_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_058668087.1\|2398175_2399591_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_125337104.1\|2399696_2403131_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_058668085.1\|2403141_2404482_+	hypothetical protein	NA	NA	NA	NA
WP_058668084.1\|2404505_2404985_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_096753932.1\|2406005_2406752_-	hypothetical protein	NA	NA	NA	NA
WP_072271835.1\|2406923_2407082_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_125336793.1\|2407147_2407462_+	hypothetical protein	NA	NA	NA	NA
WP_125337107.1\|2407419_2407620_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	3.0e-15	65.0
WP_125337110.1\|2407661_2408165_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	2.3e-27	43.2
2407633:2407646	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2796165 : 2838295

Salmonella_phage(52.27%)

integrase,tail,head,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058667972.1\|2796165_2796426_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	2.2e-18	54.7
WP_106068029.1\|2796640_2798038_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_024154042.1\|2798034_2798235_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_106068030.1\|2798231_2799632_-	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	1.7e-213	73.9
WP_106068031.1\|2799618_2800767_-	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	3.1e-104	49.3
WP_106068032.1\|2800736_2801030_-	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	8.6e-27	67.1
WP_106068033.1\|2801026_2801803_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA
WP_106068034.1\|2801799_2802015_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_106068035.1\|2802025_2802229_-	hypothetical protein	NA	NA	NA	NA
WP_047747091.1\|2802225_2802528_-	hypothetical protein	A0A0B4SK56	Proteus_phage	1.6e-07	32.0
WP_106068036.1\|2802533_2804600_-	DNA polymerase	Q775A3	Bordetella_phage	3.2e-277	68.6
WP_106068037.1\|2804675_2805224_-	DUF2815 family protein	Q775A5	Bordetella_phage	1.0e-68	68.1
WP_106068038.1\|2805239_2806541_-	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	6.8e-140	58.1
WP_106068039.1\|2807982_2808657_-	helix-turn-helix transcriptional regulator	G9L676	Escherichia_phage	3.3e-45	44.2
WP_106068040.1\|2808772_2808991_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_106068041.1\|2808994_2811163_+	replication protein	B6SCY1	Bacteriophage	1.0e-172	72.1
WP_058667961.1\|2811473_2811908_+	antitermination protein Q	B6SD39	Bacteriophage	2.6e-40	60.3
WP_070518168.1\|2812192_2812744_+	hypothetical protein	B5WZS6	Pseudomonas_phage	7.2e-43	50.3
WP_106068042.1\|2812737_2813679_+	hypothetical protein	B5WZS7	Pseudomonas_phage	1.6e-74	50.9
WP_106068043.1\|2813584_2814199_+	methyltransferase domain-containing protein	H2BDB7	Pseudomonas_virus	2.2e-48	48.2
WP_047343694.1\|2814251_2814560_+	hypothetical protein	O64361	Escherichia_phage	1.1e-24	54.3
WP_106068044.1\|2814549_2815074_+	lysozyme	I6PBN2	Cronobacter_phage	3.2e-48	59.6
WP_106068045.1\|2815070_2815616_+	hypothetical protein	K7PHH7	Enterobacteria_phage	2.6e-53	67.3
WP_039265766.1\|2815674_2816247_+\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	1.8e-60	67.9
WP_070518184.1\|2816249_2817872_+	TerL protein	A0A0M5M1R6	Salmonella_phage	3.2e-280	83.7
WP_058667955.1\|2817871_2819338_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	7.9e-246	85.9
WP_102949635.1\|2819225_2819972_+\|head	phage head morphogenesis protein	A0A0M4REK0	Salmonella_phage	1.0e-92	85.6
WP_058667953.1\|2819975_2821196_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	4.0e-187	81.9
WP_039265773.1\|2821202_2821700_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.5e-73	80.0
WP_102949660.1\|2821718_2822660_+	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	5.7e-157	85.6
WP_060816155.1\|2822703_2823063_+	hypothetical protein	A0A0M4RTX5	Salmonella_phage	2.0e-17	43.1
WP_060816154.1\|2823028_2823439_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.2e-64	86.8
WP_060816153.1\|2823435_2823984_+	hypothetical protein	A0A0M4S631	Salmonella_phage	1.8e-78	82.9
WP_102949634.1\|2823970_2824360_+\|head,tail	head-tail adaptor	A0A0M3ULK0	Salmonella_phage	1.7e-67	96.9
WP_058667949.1\|2824334_2824898_+	hypothetical protein	A0A0M4R331	Salmonella_phage	7.3e-83	79.2
WP_058667948.1\|2824901_2826047_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	3.5e-164	76.1
WP_000257260.1\|2826058_2826499_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.0e-56	74.7
WP_047064219.1\|2826502_2826955_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	1.7e-61	78.7
WP_032666018.1\|2827132_2829142_+	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	0.0e+00	96.0
WP_032625709.1\|2829141_2829729_+	bacteriophage protein	A0A0M3ULD5	Salmonella_phage	3.9e-87	89.7
WP_023344722.1\|2829728_2830031_+	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.4e-48	92.0
WP_106068046.1\|2830033_2831101_+	hypothetical protein	A0A0M4QX01	Salmonella_phage	1.1e-161	85.1
WP_102949658.1\|2831130_2831439_+	hypothetical protein	A0A0M4RTY3	Salmonella_phage	4.3e-37	96.1
WP_058667945.1\|2831588_2832320_+	hypothetical protein	NA	NA	NA	NA
WP_033883789.1\|2832319_2832748_+	hypothetical protein	NA	NA	NA	NA
WP_058667944.1\|2832812_2833466_+	hypothetical protein	A0A0M5M1K7	Salmonella_phage	2.9e-83	65.6
WP_058667942.1\|2833468_2833822_+	hypothetical protein	A0A0M4R339	Salmonella_phage	2.5e-57	94.0
WP_106068047.1\|2833822_2835022_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	2.9e-198	90.7
WP_106068048.1\|2835018_2835699_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.3e-110	81.9
WP_106068049.1\|2835698_2836322_+	hypothetical protein	A0A0M3ULD8	Salmonella_phage	2.2e-19	50.8
WP_106068050.1\|2836324_2836759_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	4.8e-42	54.9
WP_106068051.1\|2836788_2837865_-	acyltransferase	NA	NA	NA	NA
WP_106068052.1\|2838028_2838295_-	DinI family protein	K7PKR6	Enterobacteria_phage	7.5e-38	90.9

DBSCAN-SWA_4

3181068 : 3234708

Enterobacteria_phage(51.28%)

tail,head,capsid,terminase,protease,portal,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024130163.1\|3181068_3181566_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_024130164.1\|3181976_3182471_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_012131547.1\|3182457_3182724_+	chaperone NapD	NA	NA	NA	NA
WP_012131548.1\|3182720_3185207_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_058667724.1\|3185213_3185909_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_047462425.1\|3185895_3186759_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_047462429.1\|3186755_3187205_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_012131552.1\|3187214_3187817_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_012131554.1\|3187829_3188450_+	cytochrome c biogenesis heme-transporting ATPase CcmA	G3M9Y6	Bacillus_virus	8.2e-11	24.5
WP_012131555.1\|3188446_3189106_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_012131556.1\|3189250_3189988_+	heme ABC transporter permease	NA	NA	NA	NA
WP_012131557.1\|3189984_3190197_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_047462435.1\|3190193_3190673_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_047462438.1\|3190669_3192613_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_012131561.1\|3192609_3193167_+	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_058667721.1\|3193163_3194213_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_012131563.1\|3194292_3194940_-	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_058667719.1\|3195328_3196507_-	recombinase	A0A2H4J1K3	uncultured_Caudovirales_phage	1.2e-29	29.4
WP_058667717.1\|3196509_3196719_-	hypothetical protein	NA	NA	NA	NA
WP_058667715.1\|3198425_3198635_-	hypothetical protein	NA	NA	NA	NA
WP_153257544.1\|3199108_3199261_-	hypothetical protein	NA	NA	NA	NA
WP_058667712.1\|3199257_3200031_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA
WP_058667709.1\|3200027_3200519_-	hypothetical protein	NA	NA	NA	NA
WP_058667707.1\|3200515_3200770_-	hypothetical protein	NA	NA	NA	NA
WP_058667706.1\|3200930_3201470_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	1.7e-65	68.7
WP_058667704.1\|3201598_3202426_-	YfdQ family protein	A0A192Y6E5	Salmonella_phage	1.0e-112	74.2
WP_058667702.1\|3202482_3202854_-	hypothetical protein	Q8HAA1	Salmonella_phage	5.3e-58	91.9
WP_058667700.1\|3204129_3205011_+	NAD-dependent DNA ligase	U3PB51	Vibrio_phage	1.9e-29	29.0
WP_058667698.1\|3205002_3205689_-	helix-turn-helix transcriptional regulator	A0A0N7C1P9	Escherichia_phage	2.7e-39	40.3
WP_058667696.1\|3205827_3206070_+	cytoplasmic chaperone TorD	NA	NA	NA	NA
WP_058667694.1\|3206098_3206650_+	hypothetical protein	Q8SBF4	Shigella_phage	7.0e-46	53.5
WP_058669109.1\|3206888_3207533_+	antirepressor	A0A2I7RHG4	Vibrio_phage	5.7e-47	50.7
WP_058667692.1\|3207534_3207714_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_058667690.1\|3207710_3208703_+	hypothetical protein	A0A1C9IHW0	Salmonella_phage	4.5e-136	77.6
WP_058667686.1\|3209048_3209735_+	antirepressor	G0ZND1	Cronobacter_phage	4.9e-57	53.3
WP_058667684.1\|3209731_3210727_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	5.5e-142	69.5
WP_058667682.1\|3210745_3211555_+	antitermination protein	K7PGU5	Enterobacteria_phage	1.6e-83	63.8
WP_058667680.1\|3211694_3212291_-	hypothetical protein	NA	NA	NA	NA
WP_047462987.1\|3212398_3212791_+	membrane protein	G8C7V8	Escherichia_phage	7.4e-50	79.7
WP_058667678.1\|3212780_3213059_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.9e-31	71.9
WP_058667676.1\|3213215_3213845_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	3.9e-93	80.9
WP_072271854.1\|3213851_3214121_+	hypothetical protein	G8C7W1	Escherichia_phage	4.5e-22	71.3
WP_058667674.1\|3214261_3214492_+	hypothetical protein	NA	NA	NA	NA
WP_058667672.1\|3214557_3214803_+	hypothetical protein	K7PKT0	Enterobacteria_phage	2.8e-23	64.2
WP_058667670.1\|3214862_3215072_+	hypothetical protein	K7PJU3	Enterobacteria_phage	2.9e-29	86.6
WP_125336880.1\|3215156_3215666_+	hypothetical protein	NA	NA	NA	NA
WP_058667666.1\|3215916_3216462_+\|terminase	terminase small subunit	K7P7G0	Enterobacteria_phage	1.2e-90	94.5
WP_060815839.1\|3216436_3218359_+\|terminase	phage terminase large subunit family protein	E4WL19	Enterobacteria_phage	0.0e+00	94.4
WP_058667664.1\|3218358_3218565_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	4.6e-27	92.6
WP_058667662.1\|3218561_3220154_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.4e-285	90.6
WP_058667660.1\|3220134_3221463_+	S49 family peptidase	O64320	Escherichia_phage	1.1e-180	75.6
WP_058667659.1\|3221472_3221805_+\|head	head decoration protein	E4WL24	Enterobacteria_phage	1.8e-41	76.4
WP_058667657.1\|3221872_3222898_+\|capsid	major capsid protein	K7PGW9	Enterobacteria_phage	2.9e-178	90.9
WP_058667655.1\|3222940_3223333_+	hypothetical protein	A0A2R9YJP4	Escherichia_phage	2.0e-18	47.3
WP_058667653.1\|3223343_3223697_+\|tail	phage tail protein	K7P6U9	Enterobacteria_phage	1.4e-44	70.1
WP_058667652.1\|3223709_3224264_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	5.7e-72	87.5
WP_058667650.1\|3224260_3224659_+\|tail	phage tail protein	K7P7G5	Enterobacteria_phage	9.5e-53	73.5
WP_058667648.1\|3224666_3225404_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	1.4e-105	79.6
WP_058667646.1\|3225441_3225855_+\|tail	phage minor tail protein G	K7PM17	Enterobacteria_phage	2.8e-31	66.4
WP_058667644.1\|3225863_3226196_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	2.0e-43	79.2
WP_058667642.1\|3226161_3228720_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	1.7e-259	58.8
WP_058667640.1\|3228722_3229061_+\|tail	phage tail protein	E4WL34	Enterobacteria_phage	9.5e-54	88.4
WP_058667638.1\|3229116_3229854_+\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	2.3e-137	92.2
WP_058669107.1\|3229856_3230591_+	C40 family peptidase	M9NZD8	Enterobacteria_phage	5.7e-120	82.1
WP_058667636.1\|3230568_3231186_+\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	6.1e-91	83.4
WP_058667634.1\|3231240_3234708_+	host specificity protein J	M9P0D8	Enterobacteria_phage	0.0e+00	85.9

DBSCAN-SWA_5

3748060 : 3799932

Enterobacteria_phage(24.53%)

integrase,tail,terminase

attL 3750270:3750297|attR 3804874:3804901

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024130259.1\|3748060_3748291_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.0e-14	61.8
WP_012132022.1\|3748431_3748806_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_077956859.1\|3748805_3749681_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_012132024.1\|3749697_3750036_+	YebY family protein	NA	NA	NA	NA
3750270:3750297	attL	NA	NA	NA	NA
WP_060816000.1\|3750424_3751504_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	8.7e-101	53.1
WP_060816001.1\|3751478_3751751_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	3.6e-11	41.8
WP_060816002.1\|3751812_3752052_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	3.8e-25	73.1
WP_060816003.1\|3752059_3752332_-	hypothetical protein	NA	NA	NA	NA
WP_060816004.1\|3752321_3752930_-	hypothetical protein	H2BDG4	Pseudomonas_virus	2.0e-41	45.4
WP_060816005.1\|3752922_3753267_-	hypothetical protein	NA	NA	NA	NA
WP_060816006.1\|3753301_3754411_-	recombinase RecT	H6WRX0	Salmonella_phage	2.9e-184	87.8
WP_060816007.1\|3754423_3757390_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	0.0e+00	79.0
WP_077956858.1\|3757535_3757889_-	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	2.0e-46	76.9
WP_060816008.1\|3757910_3758069_-	hypothetical protein	K7P7H7	Enterobacteria_phage	4.2e-20	88.5
WP_060816009.1\|3758078_3758264_-	YebW family protein	NA	NA	NA	NA
WP_060816090.1\|3758384_3758657_-	hypothetical protein	NA	NA	NA	NA
WP_060816010.1\|3758749_3759061_+	hypothetical protein	NA	NA	NA	NA
WP_060816091.1\|3759435_3759645_+	fumarate hydratase FumD	I6R0R9	Salmonella_phage	1.8e-26	88.4
WP_015980176.1\|3759680_3760331_-	hypothetical protein	K7P6H4	Enterobacteria_phage	1.3e-107	100.0
WP_000555155.1\|3760318_3760726_-	hypothetical protein	K7P7N9	Enterobacteria_phage	4.5e-50	100.0
WP_060816011.1\|3760945_3761365_-	helix-turn-helix domain-containing protein	K7PHG0	Enterobacteria_phage	9.1e-46	70.4
WP_024130423.1\|3761436_3761670_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	9.5e-21	62.3
WP_060816092.1\|3761720_3762215_+	regulator	K7PJT7	Enterobacteria_phage	1.6e-41	60.1
WP_072271882.1\|3762329_3763328_+	replication protein	A5VW95	Enterobacteria_phage	2.8e-53	72.9
WP_060816012.1\|3763324_3764020_+	phage replication protein	G8C7U6	Escherichia_phage	3.1e-59	48.3
WP_060816013.1\|3764036_3764348_+	hypothetical protein	NA	NA	NA	NA
WP_060816014.1\|3764344_3764956_+	hypothetical protein	E7C9P6	Salmonella_phage	3.5e-38	50.3
WP_077956857.1\|3764952_3765549_+	ead/Ea22-like family protein	K7PLZ3	Enterobacterial_phage	5.1e-18	67.1
WP_060816015.1\|3765548_3765770_+	hypothetical protein	NA	NA	NA	NA
WP_060816016.1\|3765772_3766285_+	hypothetical protein	G9L6B3	Escherichia_phage	1.4e-72	76.0
WP_060816017.1\|3766281_3767148_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	9.7e-18	39.1
WP_106068061.1\|3767176_3767743_+	DUF551 domain-containing protein	A0A193GYX5	Enterobacter_phage	5.2e-28	41.5
WP_060816019.1\|3767742_3767970_+	hypothetical protein	A0A193GYL4	Enterobacter_phage	1.1e-29	93.3
WP_060816021.1\|3768209_3768548_-	hypothetical protein	NA	NA	NA	NA
WP_060816022.1\|3768550_3769099_-	hypothetical protein	NA	NA	NA	NA
WP_060816023.1\|3769296_3769530_+	DinI-like family protein	K7PM44	Enterobacteria_phage	2.6e-34	90.9
WP_012132752.1\|3769647_3769896_+	hypothetical protein	K7PHG9	Enterobacteria_phage	8.0e-42	98.8
WP_060816024.1\|3769933_3770533_+	DUF1367 family protein	S4TTI0	Salmonella_phage	4.5e-99	88.8
WP_060816025.1\|3770532_3770739_+	hypothetical protein	S4TNP0	Salmonella_phage	2.0e-22	70.6
WP_060816026.1\|3770741_3771032_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	92.7
WP_060816027.1\|3771028_3771385_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	2.0e-57	86.3
WP_060816028.1\|3771381_3771528_+	YlcG family protein	H6WRZ0	Salmonella_phage	3.5e-13	75.0
WP_060816029.1\|3771517_3772315_+	antitermination protein	H6WRZ1	Salmonella_phage	1.1e-143	93.6
WP_012132741.1\|3773172_3773478_+	hypothetical protein	O64361	Escherichia_phage	4.4e-42	84.2
WP_096753928.1\|3773477_3774005_+	lysozyme	K7PLY1	Enterobacteria_phage	1.3e-78	81.7
WP_060816094.1\|3774010_3774547_+	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_060816032.1\|3774923_3775919_+\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	6.3e-37	44.6
WP_060816033.1\|3775902_3777216_+\|terminase	terminase	A0A0S2SYF1	Pseudomonas_phage	8.5e-183	73.1
WP_060816034.1\|3777217_3778621_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	3.1e-130	54.0
WP_060816035.1\|3778607_3779720_+	hypothetical protein	I6PD76	Cronobacter_phage	2.7e-113	55.2
WP_060816036.1\|3779869_3780124_+	hypothetical protein	A0A1Q1PVR6	Bacillus_phage	9.4e-22	60.2
WP_060816037.1\|3780215_3780692_+	hypothetical protein	NA	NA	NA	NA
WP_060816038.1\|3780806_3781595_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	3.0e-66	60.4
WP_060816039.1\|3781604_3782552_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	8.4e-132	74.4
WP_060816040.1\|3782705_3782909_+	hypothetical protein	NA	NA	NA	NA
WP_060816041.1\|3782912_3784373_+	glycosyltransferase family 2 protein	A0A220NRM5	Escherichia_phage	8.4e-240	79.6
WP_060816042.1\|3784464_3784641_-	hypothetical protein	NA	NA	NA	NA
WP_077956913.1\|3784704_3785340_+	HNH endonuclease	A0A1W6DXY0	Salmonella_phage	2.1e-14	37.8
WP_060816044.1\|3785333_3785915_+	hypothetical protein	S4TR53	Salmonella_phage	1.2e-80	77.5
WP_060937471.1\|3785911_3786307_+	hypothetical protein	A0A0S2SYB7	Pseudomonas_phage	1.6e-15	44.5
WP_060816047.1\|3786495_3786879_+	hypothetical protein	A0A059VA70	Pseudomonas_phage	4.4e-23	48.0
WP_060816048.1\|3786880_3787261_+	hypothetical protein	A0A059VF88	Pseudomonas_phage	1.1e-29	50.8
WP_060816049.1\|3787257_3787650_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_060816050.1\|3787674_3788838_+	Ig domain-containing protein	A0A059VG08	Pseudomonas_phage	1.6e-60	42.1
WP_060816051.1\|3788900_3789455_+	hypothetical protein	NA	NA	NA	NA
WP_071258613.1\|3789490_3789721_+	hypothetical protein	NA	NA	NA	NA
WP_060816052.1\|3789760_3792919_+\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	9.4e-95	37.6
WP_060816053.1\|3792918_3793383_+	hypothetical protein	A0A286S298	Klebsiella_phage	2.2e-48	55.7
WP_060816054.1\|3793379_3793868_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	2.9e-59	70.7
WP_060816055.1\|3794220_3794601_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	7.2e-58	78.6
WP_060816056.1\|3794597_3797315_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	59.0
WP_060937472.1\|3797370_3799932_+	hypothetical protein	A0A0U4B0B2	Pseudomonas_phage	9.9e-18	38.5
3804874:3804901	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4695941 : 4783994

Enterobacteria_phage(18.87%)

tail,terminase,plate,tRNA,integrase,protease,portal,holin

attL 4736381:4736397|attR 4787149:4787165

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058668956.1\|4695941_4697234_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	9.5e-94	47.5
WP_024130481.1\|4697325_4698669_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	6.6e-82	41.6
WP_024130482.1\|4698679_4699291_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_081091655.1\|4699413_4703337_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.8e-88	49.5
WP_000228469.1\|4703471_4703966_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_058668955.1\|4704513_4705482_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	7.2e-62	44.0
WP_058668954.1\|4705595_4707362_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.9e-24	25.3
WP_058668953.1\|4707362_4709084_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.2e-14	31.2
WP_012133041.1\|4709128_4709833_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|4710117_4710336_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_058668952.1\|4711009_4711921_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_058668951.1\|4712029_4712896_+	pirin family protein	NA	NA	NA	NA
WP_012133047.1\|4712917_4713595_+	isochorismatase family protein	NA	NA	NA	NA
WP_058668950.1\|4714090_4714645_-	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA
WP_058668949.1\|4714654_4715656_-	type I-F CRISPR-associated protein Csy3	A0A2D0YRR8	Vibrio_phage	4.2e-49	38.7
WP_058668948.1\|4715666_4716602_-	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA
WP_058668947.1\|4716589_4717912_-	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA
WP_058668946.1\|4717929_4721160_-	type I-F CRISPR-associated helicase Cas3	A0A2I7RCU8	Vibrio_phage	6.5e-83	27.4
WP_049009757.1\|4721156_4722134_-	type I-F CRISPR-associated endonuclease Cas1	A0A2D0YFC9	Vibrio_phage	3.4e-43	34.7
WP_012133049.1\|4723296_4725573_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	7.4e-166	42.4
WP_012133050.1\|4725603_4725924_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.9
WP_000447499.1\|4726247_4726469_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_047457825.1\|4726604_4728551_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	4.1e-40	41.9
WP_058668945.1\|4728547_4729663_-	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_024130485.1\|4729811_4731470_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_024130486.1\|4731760_4732456_+	aquaporin Z	NA	NA	NA	NA
WP_012133055.1\|4732630_4733530_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_024130487.1\|4733675_4735328_+	hydroxylamine reductase	NA	NA	NA	NA
WP_024130488.1\|4735339_4736308_+	NADH oxidoreductase	NA	NA	NA	NA
4736381:4736397	attL	NA	NA	NA	NA
WP_024130489.1\|4736397_4736832_-	DoxX family protein	NA	NA	NA	NA
WP_058668944.1\|4736985_4738704_+	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	6.8e-31	23.8
WP_058668943.1\|4738742_4739744_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_058668942.1\|4739754_4741185_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_012133064.1\|4741283_4742297_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_058668941.1\|4742293_4743124_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_012133087.1\|4743120_4743444_-	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_058667564.1\|4743769_4744009_+	DinI family protein	K7P6H1	Enterobacteria_phage	2.5e-32	90.9
WP_058667562.1\|4744005_4744245_+	hypothetical protein	NA	NA	NA	NA
WP_004157630.1\|4744591_4744747_+	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	1.2e-16	78.4
WP_047463070.1\|4744769_4745180_+	type II toxin-antitoxin system HicB family antitoxin	A0A0D4DCG1	Acinetobacter_phage	2.9e-36	54.9
WP_058667560.1\|4745237_4746221_+	glycosyltransferase	A0A1V0SAH6	Catovirus	6.3e-05	30.4
WP_058667558.1\|4746313_4746892_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	5.2e-60	58.6
WP_058668940.1\|4746891_4748445_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	7.5e-61	36.7
WP_058668939.1\|4748437_4749001_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	1.1e-27	43.0
WP_060937433.1\|4748993_4749911_-\|plate	baseplate assembly protein	D5LGZ3	Escherichia_phage	8.6e-65	50.3
WP_058667554.1\|4749894_4750248_-\|plate	baseplate assembly protein	E5FFH4	Burkholderia_phage	9.4e-20	49.1
WP_060937432.1\|4750287_4751403_-	late control protein D	R9TNM7	Vibrio_phage	4.6e-36	34.0
WP_058668938.1\|4751404_4751620_-\|tail	phage tail protein	NA	NA	NA	NA
WP_058668937.1\|4751594_4752065_-\|tail	phage tail protein	D4HTW5	Vibrio_phage	1.2e-17	36.4
WP_058668936.1\|4752061_4753909_-	hypothetical protein	A0A2I7R3J9	Vibrio_phage	6.9e-29	30.2
WP_058668935.1\|4754011_4754311_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_058668933.1\|4754362_4754869_-\|tail	phage tail protein	Q75QK9	Wolbachia_phage	3.0e-11	28.1
WP_058668931.1\|4754865_4756335_-\|tail	phage tail protein	R9TMQ0	Vibrio_phage	3.5e-76	46.2
WP_058668928.1\|4756373_4756991_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	4.6e-14	38.7
WP_058668926.1\|4756983_4757538_-	hypothetical protein	NA	NA	NA	NA
WP_058668923.1\|4757549_4758206_-	hypothetical protein	D5LGZ7	Escherichia_phage	3.6e-17	36.3
WP_058668920.1\|4758207_4758564_-	hypothetical protein	NA	NA	NA	NA
WP_058668917.1\|4758563_4758899_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	7.6e-11	42.7
WP_058669163.1\|4758969_4761042_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	2.2e-201	53.7
WP_058668915.1\|4761031_4762546_-\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	2.8e-153	55.6
WP_047463010.1\|4762554_4762770_-	hypothetical protein	NA	NA	NA	NA
WP_058668913.1\|4762766_4764884_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	5.4e-304	74.5
WP_058669162.1\|4764887_4765394_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	3.1e-48	65.2
WP_058668911.1\|4765618_4765960_-	hypothetical protein	NA	NA	NA	NA
WP_058668910.1\|4766013_4766571_-	DUF2514 domain-containing protein	A0A0A0P0G7	Enterobacteria_phage	1.4e-06	38.4
WP_058668908.1\|4766567_4767185_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.3e-93	80.4
WP_000250463.1\|4767184_4767466_-\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	3.1e-18	50.0
WP_008784467.1\|4767452_4767839_-	membrane protein	A0A192Y8P2	Salmonella_phage	1.0e-56	92.2
WP_058668906.1\|4768158_4768626_-	Hsp20 family protein	NA	NA	NA	NA
WP_058668903.1\|4769780_4770596_-	molecular chaperone	A0A1B5FPA5	Escherichia_phage	1.7e-109	69.7
WP_058668901.1\|4770592_4770781_-	hypothetical protein	NA	NA	NA	NA
WP_058668899.1\|4770777_4771089_-	hypothetical protein	NA	NA	NA	NA
WP_058668896.1\|4771099_4772455_-	helicase	Q8W640	Enterobacteria_phage	1.8e-172	69.0
WP_106068057.1\|4772451_4773336_-	AAA family ATPase	Q8W641	Enterobacteria_phage	2.0e-82	65.3
WP_058668893.1\|4773337_4774261_-	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	5.3e-115	79.1
WP_058668890.1\|4774257_4775082_-	transporter	Q8W644	Enterobacteria_phage	3.9e-117	72.3
WP_072274353.1\|4775114_4775342_-	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	7.4e-18	56.3
WP_058668888.1\|4775451_4776150_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	2.6e-77	61.3
WP_125337035.1\|4776362_4776596_+	hypothetical protein	NA	NA	NA	NA
WP_058668885.1\|4776579_4776780_+	hypothetical protein	A0A1B5FPB2	Escherichia_phage	4.6e-08	50.8
WP_058668883.1\|4776779_4776965_+	hypothetical protein	NA	NA	NA	NA
WP_058668882.1\|4777027_4777297_+	hypothetical protein	NA	NA	NA	NA
WP_058668880.1\|4777412_4777760_+	hypothetical protein	NA	NA	NA	NA
WP_058668878.1\|4777752_4778025_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	2.8e-08	41.8
WP_058667570.1\|4778211_4778646_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.8e-47	68.5
WP_058669161.1\|4778686_4779205_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.3e-70	72.7
WP_058668876.1\|4779217_4779796_+	hypothetical protein	NA	NA	NA	NA
WP_058667566.1\|4780079_4780454_+	hypothetical protein	NA	NA	NA	NA
WP_058667573.1\|4780671_4780911_+	excisionase family protein	S4TND0	Salmonella_phage	1.7e-25	70.8
WP_081093757.1\|4780936_4782262_+\|integrase	site-specific integrase	Q20GI2	Phage_258-320	3.3e-166	64.2
WP_012133088.1\|4782357_4782873_+	lipoprotein	NA	NA	NA	NA
WP_024130493.1\|4783265_4783994_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.1e-27	36.2
4787149:4787165	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022073

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection